Citrus Sinensis ID: 010013
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 520 | 2.2.26 [Sep-21-2011] | |||||||
| Q42479 | 529 | Calcium-dependent protein | yes | no | 0.894 | 0.879 | 0.808 | 0.0 | |
| Q9FMP5 | 528 | Calcium-dependent protein | no | no | 0.921 | 0.907 | 0.723 | 0.0 | |
| Q3E9C0 | 523 | Calcium-dependent protein | no | no | 0.923 | 0.917 | 0.721 | 0.0 | |
| P53683 | 533 | Calcium-dependent protein | no | no | 0.961 | 0.938 | 0.659 | 0.0 | |
| Q38868 | 541 | Calcium-dependent protein | no | no | 0.976 | 0.939 | 0.634 | 0.0 | |
| Q9C6P3 | 521 | Calcium-dependent protein | no | no | 0.911 | 0.909 | 0.700 | 0.0 | |
| P49101 | 513 | Calcium-dependent protein | N/A | no | 0.913 | 0.925 | 0.677 | 0.0 | |
| Q9ZSA2 | 531 | Calcium-dependent protein | no | no | 0.896 | 0.877 | 0.680 | 0.0 | |
| O49717 | 554 | Calcium-dependent protein | no | no | 0.869 | 0.815 | 0.686 | 0.0 | |
| P28582 | 532 | Calcium-dependent protein | N/A | no | 0.855 | 0.836 | 0.697 | 0.0 |
| >sp|Q42479|CDPK3_ARATH Calcium-dependent protein kinase 3 OS=Arabidopsis thaliana GN=CPK3 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 811 bits (2094), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/465 (80%), Positives = 430/465 (92%)
Query: 55 GRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDV 114
GR+LG+PME+VR TY FGRELGRGQFGVTYLVTHK+TKQQ ACKSI +R+L+++DD+EDV
Sbjct: 64 GRILGRPMEEVRRTYEFGRELGRGQFGVTYLVTHKETKQQVACKSIPTRRLVHKDDIEDV 123
Query: 115 RREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLC 174
RREVQIMHHL+GHRNIV+LKGAYEDRHSVNLIM+LC GGELFDRII+KG YSERAAA+LC
Sbjct: 124 RREVQIMHHLSGHRNIVDLKGAYEDRHSVNLIMELCEGGELFDRIISKGLYSERAAADLC 183
Query: 175 RQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSA 234
RQMV VVH CHSMGVMHRDLKPENFLF S E+SPLKATDFGLSVFFKPGD FKDLVGSA
Sbjct: 184 RQMVMVVHSCHSMGVMHRDLKPENFLFLSKDENSPLKATDFGLSVFFKPGDKFKDLVGSA 243
Query: 235 YYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP 294
YYVAPEVL+RNYG EADIWSAGVILYILLSGVPPFWGE E IFDAIL+G +DFS+DPWP
Sbjct: 244 YYVAPEVLKRNYGPEADIWSAGVILYILLSGVPPFWGENETGIFDAILQGQLDFSADPWP 303
Query: 295 NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNK 354
+S AKD+V+KML DPK+RL+AAEVLNHPW+R DG+ASDKPLD AVL+RMKQFRAMNK
Sbjct: 304 ALSDGAKDLVRKMLKYDPKDRLTAAEVLNHPWIREDGEASDKPLDNAVLSRMKQFRAMNK 363
Query: 355 LKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQL 414
LKK+ALKVIAENLSEEEI+GLKEMFKS+DTDN+G +T EEL+ GLPKLG+++SE+E+RQL
Sbjct: 364 LKKMALKVIAENLSEEEIIGLKEMFKSLDTDNNGIVTLEELRTGLPKLGSKISEAEIRQL 423
Query: 415 MEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY 474
MEAAD+DG+G+IDY+EFI+ATMHMNR+ERE+HLY AF++FD DNSGYITMEELE A+KKY
Sbjct: 424 MEAADMDGDGSIDYLEFISATMHMNRIEREDHLYTAFQFFDNDNSGYITMEELELAMKKY 483
Query: 475 NMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGNPDMVGNRRR 519
NMGD K+IKEIIAEVD D DG+INYEEF AMM+KGNP++V NRRR
Sbjct: 484 NMGDDKSIKEIIAEVDTDRDGKINYEEFVAMMKKGNPELVPNRRR 528
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May play a role in signal transduction pathways that involve calcium as a second messenger. Functions in abscisic acid (ABA) regulation of guard cell S-type anion-and Ca(2+)-permeable channels and stomatal closure. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q9FMP5|CDPKH_ARATH Calcium-dependent protein kinase 17 OS=Arabidopsis thaliana GN=CPK17 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/485 (72%), Positives = 415/485 (85%), Gaps = 6/485 (1%)
Query: 36 PPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQF 95
PP PP + +G VLG+PMEDV+ +Y G+ELGRGQFGVT+L T K T QF
Sbjct: 46 PPSPP------PATKQGPIGPVLGRPMEDVKASYSLGKELGRGQFGVTHLCTQKATGHQF 99
Query: 96 ACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGEL 155
ACK+I+ RKL+N++D+EDVRREVQIMHHLTG NIVELKGAYED+HSV+L+M+LCAGGEL
Sbjct: 100 ACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELKGAYEDKHSVHLVMELCAGGEL 159
Query: 156 FDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDF 215
FDRIIAKGHYSERAAA+L R +V +VH CHSMGV+HRDLKPENFL + E+SPLKATDF
Sbjct: 160 FDRIIAKGHYSERAAASLLRTIVQIVHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDF 219
Query: 216 GLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQ 275
GLSVF+KPG+VFKD+VGSAYY+APEVL+R YG EADIWS GV+LYILL GVPPFW E+E
Sbjct: 220 GLSVFYKPGEVFKDIVGSAYYIAPEVLKRKYGPEADIWSIGVMLYILLCGVPPFWAESEN 279
Query: 276 SIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASD 335
IF+AILRGH+DFSSDPWP+IS AKD+VKKML++DPK+RL+AA+VLNHPW++ DG+A D
Sbjct: 280 GIFNAILRGHVDFSSDPWPSISPQAKDLVKKMLNSDPKQRLTAAQVLNHPWIKEDGEAPD 339
Query: 336 KPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEEL 395
PLD AV++R+KQF+AMN KKVAL+VIA LSEEEIMGLKEMFK MDTD+SGTIT EEL
Sbjct: 340 VPLDNAVMSRLKQFKAMNNFKKVALRVIAGCLSEEEIMGLKEMFKGMDTDSSGTITLEEL 399
Query: 396 KAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFD 455
+ GL K GTRLSE EV+QLMEAAD DGNGTIDY EFI ATMH+NR++REEHLY AF++FD
Sbjct: 400 RQGLAKQGTRLSEYEVQQLMEAADADGNGTIDYGEFIAATMHINRLDREEHLYSAFQHFD 459
Query: 456 KDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGNPDMVG 515
KDNSGYITMEELE AL+++ M D + IKEII+EVD DNDGRINY+EF AMMRKGNPD +
Sbjct: 460 KDNSGYITMEELEQALREFGMNDGRDIKEIISEVDGDNDGRINYDEFVAMMRKGNPDPIP 519
Query: 516 NRRRK 520
+RR+
Sbjct: 520 KKRRE 524
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May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q3E9C0|CDPKY_ARATH Calcium-dependent protein kinase 34 OS=Arabidopsis thaliana GN=CPK34 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/485 (72%), Positives = 412/485 (84%), Gaps = 5/485 (1%)
Query: 36 PPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQF 95
PP P P++ +G VLG+PMEDV+++Y G+ELGRGQFGVT+L T K T QF
Sbjct: 40 PPASPPPATK-----QGPIGPVLGRPMEDVKSSYTLGKELGRGQFGVTHLCTQKATGLQF 94
Query: 96 ACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGEL 155
ACK+I+ RKL+N++D+EDVRREVQIMHHLTG NIVELKGAYED+HSV+L+M+LCAGGEL
Sbjct: 95 ACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELKGAYEDKHSVHLVMELCAGGEL 154
Query: 156 FDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDF 215
FDRIIAKGHYSERAAA+L R +V ++H CHSMGV+HRDLKPENFL S E+SPLKATDF
Sbjct: 155 FDRIIAKGHYSERAAASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLSKDENSPLKATDF 214
Query: 216 GLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQ 275
GLSVF+KPG+VFKD+VGSAYY+APEVLRR YG EADIWS GV+LYILL GVPPFW E+E
Sbjct: 215 GLSVFYKPGEVFKDIVGSAYYIAPEVLRRKYGPEADIWSIGVMLYILLCGVPPFWAESEN 274
Query: 276 SIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASD 335
IF+AIL G +DFSSDPWP IS AKD+V+KML++DPK+RL+AA+VLNHPW++ DG+A D
Sbjct: 275 GIFNAILSGQVDFSSDPWPVISPQAKDLVRKMLNSDPKQRLTAAQVLNHPWIKEDGEAPD 334
Query: 336 KPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEEL 395
PLD AV++R+KQF+AMN KKVAL+VIA LSEEEIMGLKEMFK MDTDNSGTIT EEL
Sbjct: 335 VPLDNAVMSRLKQFKAMNNFKKVALRVIAGCLSEEEIMGLKEMFKGMDTDNSGTITLEEL 394
Query: 396 KAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFD 455
+ GL K GTRLSE EV+QLMEAAD DGNGTIDY EFI ATMH+NR++REEHLY AF++FD
Sbjct: 395 RQGLAKQGTRLSEYEVQQLMEAADADGNGTIDYGEFIAATMHINRLDREEHLYSAFQHFD 454
Query: 456 KDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGNPDMVG 515
KDNSGYIT EELE AL+++ M D + IKEII+EVD DNDGRINYEEF AMMRKGNPD
Sbjct: 455 KDNSGYITTEELEQALREFGMNDGRDIKEIISEVDGDNDGRINYEEFVAMMRKGNPDPNP 514
Query: 516 NRRRK 520
+RR+
Sbjct: 515 KKRRE 519
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May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P53683|CDPK2_ORYSJ Calcium-dependent protein kinase isoform 2 OS=Oryza sativa subsp. japonica GN=CPK2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/517 (65%), Positives = 416/517 (80%), Gaps = 17/517 (3%)
Query: 2 GNCNGLPSSQTQLHSTTADPDTGPGHHPNGLKIDPPGPPRPSSSATSATSSSVGR----- 56
G NG S H T T +HP + PP R + SA +
Sbjct: 16 GGANGYGYS----HQTKPAQTTPSYNHP---QPPPPAEVRYTPSAMNPPVVPPVVAPPKP 68
Query: 57 ----VLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVE 112
+LGKP +DVR+ Y G+ELGRGQFGVTYL T + +Q+ACKSIS RKL+++ D E
Sbjct: 69 TPDTILGKPYDDVRSVYSLGKELGRGQFGVTYLCTEIASGKQYACKSISKRKLVSKADKE 128
Query: 113 DVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAAN 172
D+RRE+QIM HL+G +NIVE +GAYED+ +V+++M+LCAGGELFDRIIAKGHYSERAAA
Sbjct: 129 DIRREIQIMQHLSGQQNIVEFRGAYEDKSNVHVVMELCAGGELFDRIIAKGHYSERAAAT 188
Query: 173 LCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVG 232
+CR +V VV+ CH MGVMHRDLKPENFL ++ E++ LKATDFGLSVF + G +++D+VG
Sbjct: 189 ICRAVVNVVNICHFMGVMHRDLKPENFLLATKEENAMLKATDFGLSVFIEEGKMYRDIVG 248
Query: 233 SAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292
SAYYVAPEVLRRNYG E D+WSAGVILYILLSGVPPFW ETE+ IFDAIL+G IDF S P
Sbjct: 249 SAYYVAPEVLRRNYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILQGEIDFESQP 308
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAM 352
WP+IS SAKD+V+KML DPK+R+++A+VL HPW+R DG+ASDKP+D AVL+RMKQFRAM
Sbjct: 309 WPSISESAKDLVRKMLTQDPKKRITSAQVLQHPWLR-DGEASDKPIDSAVLSRMKQFRAM 367
Query: 353 NKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVR 412
NKLKK+ALKVIA NL+EEEI GLK+MF +MDTDNSGTIT+EELKAGL KLG++LSE+EV+
Sbjct: 368 NKLKKMALKVIASNLNEEEIKGLKQMFTNMDTDNSGTITYEELKAGLAKLGSKLSEAEVK 427
Query: 413 QLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALK 472
QLMEAADVDGNG+IDY+EFITATMH +++ER+EHL+KAF+YFDKDNSG+IT +ELE AL
Sbjct: 428 QLMEAADVDGNGSIDYVEFITATMHRHKLERDEHLFKAFQYFDKDNSGFITRDELESALI 487
Query: 473 KYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRKG 509
++ MGD TIK+II+EVD DNDGRINYEEF AMMR G
Sbjct: 488 EHEMGDTSTIKDIISEVDTDNDGRINYEEFCAMMRGG 524
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May play a role in signal transduction pathways that involve calcium as a second messenger. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q38868|CDPK9_ARATH Calcium-dependent protein kinase 9 OS=Arabidopsis thaliana GN=CPK9 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/536 (63%), Positives = 412/536 (76%), Gaps = 28/536 (5%)
Query: 1 MGNC------------NGLPSSQTQLHSTTADPDTGPGHHPNGLKIDPPGPPRPSSSA-- 46
MGNC NG + ++ T DP P + P P P +S
Sbjct: 1 MGNCFAKNHGLMKPQQNGNTTRSVEVGVTNQDP---PSYTPQARTTQQPEKPGSVNSQPP 57
Query: 47 -----------TSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQF 95
+ T++ +L EDV+ Y G+ELGRGQFGVTYL T T +++
Sbjct: 58 PWRAAAAAPGLSPKTTTKSNSILENAFEDVKLFYTLGKELGRGQFGVTYLCTENSTGKKY 117
Query: 96 ACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGEL 155
ACKSIS +KL+ + D +D+RRE+QIM HL+G NIVE KGAYED +VNL+M+LCAGGEL
Sbjct: 118 ACKSISKKKLVTKADKDDMRREIQIMQHLSGQPNIVEFKGAYEDEKAVNLVMELCAGGEL 177
Query: 156 FDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDF 215
FDRIIAKGHY+ERAAA++CRQ+V VV CH MGV+HRDLKPENFL SS E + +KATDF
Sbjct: 178 FDRIIAKGHYTERAAASVCRQIVNVVKICHFMGVLHRDLKPENFLLSSKDEKALIKATDF 237
Query: 216 GLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQ 275
GLSVF + G V++D+VGSAYYVAPEVLRR YG E DIWSAG+ILYILLSGVPPFW ETE+
Sbjct: 238 GLSVFIEEGKVYRDIVGSAYYVAPEVLRRRYGKEVDIWSAGIILYILLSGVPPFWAETEK 297
Query: 276 SIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASD 335
IFDAIL GHIDF S PWP+ISSSAKD+V++ML ADPK R+SAA+VL HPW+R G+ASD
Sbjct: 298 GIFDAILEGHIDFESQPWPSISSSAKDLVRRMLTADPKRRISAADVLQHPWLREGGEASD 357
Query: 336 KPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEEL 395
KP+D AVL+RMKQFRAMNKLKK+ALKVIAEN+ EEI GLK MF ++DTDNSGTIT+EEL
Sbjct: 358 KPIDSAVLSRMKQFRAMNKLKKLALKVIAENIDTEEIQGLKAMFANIDTDNSGTITYEEL 417
Query: 396 KAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFD 455
K GL KLG++L+E+EV+QLM+AADVDGNG+IDYIEFITATMH +R+E E+LYKAF++FD
Sbjct: 418 KEGLAKLGSKLTEAEVKQLMDAADVDGNGSIDYIEFITATMHRHRLESNENLYKAFQHFD 477
Query: 456 KDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGNP 511
KD+SGYIT++ELE ALK+Y MGD TIKE++++VD DNDGRINYEEF AMMR GNP
Sbjct: 478 KDSSGYITIDELESALKEYGMGDDATIKEVLSDVDSDNDGRINYEEFCAMMRSGNP 533
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9C6P3|CDPKX_ARATH Calcium-dependent protein kinase 33 OS=Arabidopsis thaliana GN=CPK33 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 706 bits (1823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/474 (70%), Positives = 393/474 (82%)
Query: 38 GPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFAC 97
G +P A S +L KP EDV+ Y +ELGRGQFGVTYL T K T ++FAC
Sbjct: 42 GTNQPPPWRNPAKHSGAAAILEKPYEDVKLFYTLSKELGRGQFGVTYLCTEKSTGKRFAC 101
Query: 98 KSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFD 157
KSIS +KL+ + D ED+RRE+QIM HL+G NIVE KGAYED +VNL+M+LCAGGELFD
Sbjct: 102 KSISKKKLVTKGDKEDMRREIQIMQHLSGQPNIVEFKGAYEDEKAVNLVMELCAGGELFD 161
Query: 158 RIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217
RI+AKGHYSERAAA++CRQ+V VV+ CH MGVMHRDLKPENFL SS E + +KATDFGL
Sbjct: 162 RILAKGHYSERAAASVCRQIVNVVNICHFMGVMHRDLKPENFLLSSKDEKALIKATDFGL 221
Query: 218 SVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSI 277
SVF + G V+KD+VGSAYYVAPEVL+R YG E DIWSAG+ILYILLSGVPPFW ETE+ I
Sbjct: 222 SVFIEEGRVYKDIVGSAYYVAPEVLKRRYGKEIDIWSAGIILYILLSGVPPFWAETEKGI 281
Query: 278 FDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKP 337
FDAIL G IDF S PWP+IS+SAKD+V++ML DPK R+SAAEVL HPW+R G+ASDKP
Sbjct: 282 FDAILEGEIDFESQPWPSISNSAKDLVRRMLTQDPKRRISAAEVLKHPWLREGGEASDKP 341
Query: 338 LDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKA 397
+D AVL+RMKQFRAMNKLKK+ALKVIAEN+ EEI GLK MF ++DTDNSGTIT+EELK
Sbjct: 342 IDSAVLSRMKQFRAMNKLKKLALKVIAENIDTEEIQGLKAMFANIDTDNSGTITYEELKE 401
Query: 398 GLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKD 457
GL KLG+RL+E+EV+QLM+AADVDGNG+IDYIEFITATMH +R+E E++YKAF++FDKD
Sbjct: 402 GLAKLGSRLTEAEVKQLMDAADVDGNGSIDYIEFITATMHRHRLESNENVYKAFQHFDKD 461
Query: 458 NSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGNP 511
SGYIT +ELE ALK+Y MGD TIKEI+++VD DNDGRINY+EF AMMR GNP
Sbjct: 462 GSGYITTDELEAALKEYGMGDDATIKEILSDVDADNDGRINYDEFCAMMRSGNP 515
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P49101|CDPK2_MAIZE Calcium-dependent protein kinase 2 OS=Zea mays GN=CPK2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/487 (67%), Positives = 401/487 (82%), Gaps = 12/487 (2%)
Query: 35 DPPGPPRPSSSATSATSSS------------VGRVLGKPMEDVRNTYIFGRELGRGQFGV 82
+PP SAT+SS +LGK EDVR+ Y FG+ELGRGQFGV
Sbjct: 19 NPPQQAAEVRYTPSATNSSAVPPVAVPPKPTADTILGKQYEDVRSVYSFGKELGRGQFGV 78
Query: 83 TYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142
TYL T + +Q+ACKSIS RKL+++ D ED+RRE+QIM HL+G NIVE +GAYED+ +
Sbjct: 79 TYLCTEIASGRQYACKSISKRKLVSKADREDIRREIQIMQHLSGQPNIVEFRGAYEDKSN 138
Query: 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFS 202
V+++M+LCAGGELFDRIIAKGHY+ERAAA +CR +V VV+ CH MGVMHRDLKPENFL +
Sbjct: 139 VHVVMELCAGGELFDRIIAKGHYTERAAATICRAVVNVVNICHFMGVMHRDLKPENFLLA 198
Query: 203 SSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYIL 262
+ E++ LKATDFGLSVF + G +++D+VGSAYYVAPEVLRR+YG E D+WSAGVILYIL
Sbjct: 199 TMEENAMLKATDFGLSVFIEEGKMYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYIL 258
Query: 263 LSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVL 322
LSGVPPFW E E+ IFDAIL IDF S PWP+IS SAKD+V+KML DPK+RL++A+VL
Sbjct: 259 LSGVPPFWAEIEKGIFDAILHEEIDFESQPWPSISESAKDLVRKMLTRDPKKRLTSAQVL 318
Query: 323 NHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSM 382
H W+R G+ASDKP+D AVL+RMKQFRAMNKLKK+ALKVIA NL+EEEI GLK+MF +M
Sbjct: 319 QHQWLREGGEASDKPIDSAVLSRMKQFRAMNKLKKMALKVIASNLNEEEIKGLKQMFMNM 378
Query: 383 DTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVE 442
DTDNSGTIT+EELKAGL KLG++LSE+EV+QLMEAADVDGNG+IDY+EFITATMH +++E
Sbjct: 379 DTDNSGTITYEELKAGLAKLGSKLSEAEVKQLMEAADVDGNGSIDYVEFITATMHRHKLE 438
Query: 443 REEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEF 502
R+EHL+KAF+YFDKDNSG+IT +ELE AL ++ MGD TI+EII+EVD DNDGRINYEEF
Sbjct: 439 RDEHLFKAFQYFDKDNSGFITRDELESALIEHEMGDTSTIREIISEVDTDNDGRINYEEF 498
Query: 503 AAMMRKG 509
AMMR G
Sbjct: 499 CAMMRGG 505
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Zea mays (taxid: 4577) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9ZSA2|CDPKL_ARATH Calcium-dependent protein kinase 21 OS=Arabidopsis thaliana GN=CPK21 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/469 (68%), Positives = 390/469 (83%), Gaps = 3/469 (0%)
Query: 42 PSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSIS 101
PSS+ S +LGKP ED+R Y G+ELGRGQFG+TY+ T +ACKSI
Sbjct: 55 PSSNPVSVRDPDT--ILGKPFEDIRKFYSLGKELGRGQFGITYMCKEIGTGNTYACKSIL 112
Query: 102 SRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA 161
RKLI++ D EDV+RE+QIM +L+G NIVE+KGAYEDR S++L+M+LCAGGELFDRIIA
Sbjct: 113 KRKLISKQDKEDVKREIQIMQYLSGQPNIVEIKGAYEDRQSIHLVMELCAGGELFDRIIA 172
Query: 162 KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221
+GHYSERAAA + R +V VV CH MGV+HRDLKPENFL SS E++ LKATDFGLSVF
Sbjct: 173 QGHYSERAAAGIIRSIVNVVQICHFMGVVHRDLKPENFLLSSKEENAMLKATDFGLSVFI 232
Query: 222 KPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAI 281
+ G V++D+VGSAYYVAPEVLRR+YG E DIWSAGVILYILLSGVPPFW E E+ IFD +
Sbjct: 233 EEGKVYRDIVGSAYYVAPEVLRRSYGKEIDIWSAGVILYILLSGVPPFWAENEKGIFDEV 292
Query: 282 LRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIA 341
++G IDF S+PWP+IS SAKD+V+KML DPK R++AA+VL HPW++ G+A DKP+D A
Sbjct: 293 IKGEIDFVSEPWPSISESAKDLVRKMLTKDPKRRITAAQVLEHPWIK-GGEAPDKPIDSA 351
Query: 342 VLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPK 401
VL+RMKQFRAMNKLKK+ALKVIAE+LSEEEI GLK MF ++DTD SGTIT+EELK GL +
Sbjct: 352 VLSRMKQFRAMNKLKKLALKVIAESLSEEEIKGLKTMFANIDTDKSGTITYEELKTGLTR 411
Query: 402 LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGY 461
LG+RLSE+EV+QLMEAADVDGNGTIDY EFI+ATMH +++R+EH+YKAF++FDKDNSG+
Sbjct: 412 LGSRLSETEVKQLMEAADVDGNGTIDYYEFISATMHRYKLDRDEHVYKAFQHFDKDNSGH 471
Query: 462 ITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGN 510
IT +ELE A+K+Y MGD +IKE+I+EVD DNDGRIN+EEF AMMR G+
Sbjct: 472 ITRDELESAMKEYGMGDEASIKEVISEVDTDNDGRINFEEFCAMMRSGS 520
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Mediates the phosphorylation and activation of the S-type anion efflux channel SLAC1. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O49717|CDPKF_ARATH Calcium-dependent protein kinase 15 OS=Arabidopsis thaliana GN=CPK15 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/453 (68%), Positives = 381/453 (84%), Gaps = 1/453 (0%)
Query: 57 VLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR 116
+LGKP E++R Y G+ELGRGQFG+TY T +ACKSI RKL + D++DV+R
Sbjct: 90 ILGKPFEEIRKLYTLGKELGRGQFGITYTCKENSTGNTYACKSILKRKLTRKQDIDDVKR 149
Query: 117 EVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQ 176
E+QIM +L+G NIVE+KGAYEDR S++L+M+LC G ELFDRIIA+GHYSE+AAA + R
Sbjct: 150 EIQIMQYLSGQENIVEIKGAYEDRQSIHLVMELCGGSELFDRIIAQGHYSEKAAAGVIRS 209
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYY 236
++ VV CH MGV+HRDLKPENFL +S+ E++ LKATDFGLSVF + G V++D+VGSAYY
Sbjct: 210 VLNVVQICHFMGVIHRDLKPENFLLASTDENAMLKATDFGLSVFIEEGKVYRDIVGSAYY 269
Query: 237 VAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296
VAPEVLRR+YG E DIWSAG+ILYILL GVPPFW ETE+ IF+ I++G IDF S PWP+I
Sbjct: 270 VAPEVLRRSYGKEIDIWSAGIILYILLCGVPPFWSETEKGIFNEIIKGEIDFDSQPWPSI 329
Query: 297 SSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLK 356
S SAKD+V+K+L DPK+R+SAA+ L HPW+R G+A DKP+D AVL+RMKQFRAMNKLK
Sbjct: 330 SESAKDLVRKLLTKDPKQRISAAQALEHPWIR-GGEAPDKPIDSAVLSRMKQFRAMNKLK 388
Query: 357 KVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLME 416
K+ALKVIAE+LSEEEI GLK MF +MDTD SGTIT+EELK GL KLG++L+E+EV+QLME
Sbjct: 389 KLALKVIAESLSEEEIKGLKTMFANMDTDKSGTITYEELKNGLAKLGSKLTEAEVKQLME 448
Query: 417 AADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNM 476
AADVDGNGTIDYIEFI+ATMH R +R+EH++KAF+YFDKDNSG+ITM+ELE A+K+Y M
Sbjct: 449 AADVDGNGTIDYIEFISATMHRYRFDRDEHVFKAFQYFDKDNSGFITMDELESAMKEYGM 508
Query: 477 GDAKTIKEIIAEVDIDNDGRINYEEFAAMMRKG 509
GD +IKE+IAEVD DNDGRINYEEF AMMR G
Sbjct: 509 GDEASIKEVIAEVDTDNDGRINYEEFCAMMRSG 541
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P28582|CDPK_DAUCA Calcium-dependent protein kinase OS=Daucus carota PE=2 SV=2 | Back alignment and function description |
|---|
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/447 (69%), Positives = 381/447 (85%), Gaps = 2/447 (0%)
Query: 57 VLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR 116
+LGKP ED+R Y G+ELGRGQFG Y T + Q +ACKSI RKL++++D ED++R
Sbjct: 69 ILGKPFEDIRGKYTLGKELGRGQFGCVYQCTENSSGQLYACKSILKRKLVSKNDKEDIKR 128
Query: 117 EVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQ 176
E+QI+ HL+G NIVE KG +EDR SV+L+M+LCAGGELFDRIIA+GHYSERAAA +CRQ
Sbjct: 129 EIQILQHLSGQPNIVEFKGVFEDRQSVHLVMELCAGGELFDRIIAQGHYSERAAATICRQ 188
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYY 236
+V VVH CH MGVMHRDLKPENFL SS +D+ LKATDFGLSVF + G V++++VGSAYY
Sbjct: 189 IVNVVHVCHFMGVMHRDLKPENFLLSSKDKDAMLKATDFGLSVFIEEGKVYRNIVGSAYY 248
Query: 237 VAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296
VAPEVLRR+YG E DIWSAGVILYILLSGVPPFW E E+ IFDAIL G IDF S+PWP++
Sbjct: 249 VAPEVLRRSYGKEIDIWSAGVILYILLSGVPPFWAENEKGIFDAILEGVIDFESEPWPSV 308
Query: 297 SSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLK 356
S+SAKD+V+KML DP+ R+++A+VL+HPWMR G+ASDKP+D AVL+RMKQFRAMNKLK
Sbjct: 309 SNSAKDLVRKMLTQDPRRRITSAQVLDHPWMREGGEASDKPIDSAVLSRMKQFRAMNKLK 368
Query: 357 KVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLME 416
++ALKVIAE+LSEEEI GLK MF +MDTD SGTIT+EELK+GL +LG++LSE EV+QLM+
Sbjct: 369 QLALKVIAESLSEEEIKGLKSMFANMDTDKSGTITYEELKSGLARLGSKLSEVEVQQLMD 428
Query: 417 AADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNM 476
AADVDGNGTIDY+EFITATMH +++E EH +AF+YFDKDNSG+IT +ELE A+K+Y M
Sbjct: 429 AADVDGNGTIDYLEFITATMHRHKLESYEH--QAFQYFDKDNSGFITKDELESAMKEYGM 486
Query: 477 GDAKTIKEIIAEVDIDNDGRINYEEFA 503
GD TIK+II+EVD DNDGRINY+EF
Sbjct: 487 GDEATIKDIISEVDSDNDGRINYDEFC 513
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Daucus carota (taxid: 4039) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 520 | ||||||
| 224053829 | 515 | calcium dependent protein kinase 3 [Popu | 0.988 | 0.998 | 0.838 | 0.0 | |
| 225426094 | 528 | PREDICTED: calcium-dependent protein kin | 0.996 | 0.981 | 0.833 | 0.0 | |
| 255537639 | 528 | calcium-dependent protein kinase, putati | 0.926 | 0.912 | 0.876 | 0.0 | |
| 224075036 | 520 | calcium dependent protein kinase 22 [Pop | 0.988 | 0.988 | 0.847 | 0.0 | |
| 356497285 | 505 | PREDICTED: calcium-dependent protein kin | 0.971 | 1.0 | 0.830 | 0.0 | |
| 147814808 | 482 | hypothetical protein VITISV_032639 [Viti | 0.894 | 0.964 | 0.896 | 0.0 | |
| 356539541 | 505 | PREDICTED: calcium-dependent protein kin | 0.971 | 1.0 | 0.832 | 0.0 | |
| 356513317 | 518 | PREDICTED: calcium-dependent protein kin | 0.978 | 0.982 | 0.820 | 0.0 | |
| 356513319 | 532 | PREDICTED: calcium-dependent protein kin | 0.978 | 0.956 | 0.799 | 0.0 | |
| 114804153 | 514 | CDPK1 [Ipomoea nil] gi|397746248|gb|AFO6 | 0.973 | 0.984 | 0.791 | 0.0 |
| >gi|224053829|ref|XP_002298000.1| calcium dependent protein kinase 3 [Populus trichocarpa] gi|222845258|gb|EEE82805.1| calcium dependent protein kinase 3 [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 904 bits (2336), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/521 (83%), Positives = 471/521 (90%), Gaps = 7/521 (1%)
Query: 1 MGNCNGLPSSQTQLHSTTADPDTGPGHHPNGLKIDPP-GPPRPSSSATSATSSSVGRVLG 59
MGNCN L SS + + P + G+K+ PP P P S +S++VGRVLG
Sbjct: 1 MGNCNSLASSSSTTTNHRNPPPSN-----GGIKVLPPNASPPPRSQFLHHSSAAVGRVLG 55
Query: 60 KPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQ 119
+PMEDVRNTY FGRE+GRGQFGVTYLVTHK+TKQ FACKSI+ RKLINRDD+EDV REVQ
Sbjct: 56 RPMEDVRNTYTFGREVGRGQFGVTYLVTHKETKQHFACKSIAKRKLINRDDIEDVLREVQ 115
Query: 120 IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVT 179
IMHHLTGHRN+VELKGAYEDRHSVNLIM+LC GGELFDRII KGHYSERAAANLCRQ+VT
Sbjct: 116 IMHHLTGHRNVVELKGAYEDRHSVNLIMELCEGGELFDRIITKGHYSERAAANLCRQIVT 175
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAP 239
VVH CH+MGV+HRDLKPENFLF S+ EDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAP
Sbjct: 176 VVHNCHTMGVIHRDLKPENFLFLSTHEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAP 235
Query: 240 EVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299
EVLRRNYGAE DIWSAGVILYILLSGVPPFWGETEQ+IFD+ILRGHIDFSSDPWP+ISSS
Sbjct: 236 EVLRRNYGAEVDIWSAGVILYILLSGVPPFWGETEQAIFDSILRGHIDFSSDPWPSISSS 295
Query: 300 AKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVA 359
AKD+VK+ML ADPKER+SA EVLNHPWMR DG ASDKPLDIAVLTRMKQFRAMNKLKK+A
Sbjct: 296 AKDLVKQMLRADPKERISAVEVLNHPWMREDG-ASDKPLDIAVLTRMKQFRAMNKLKKIA 354
Query: 360 LKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAAD 419
LKVIAENLSEEEIMGLKEMFKSMDTDN+GTITFEELKAGLPKLGT+LSESEVRQLMEAAD
Sbjct: 355 LKVIAENLSEEEIMGLKEMFKSMDTDNNGTITFEELKAGLPKLGTKLSESEVRQLMEAAD 414
Query: 420 VDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDA 479
VDGNGTIDYIEFITATMHMNR+ERE+HLYKAFEYFDKD SGYITMEELE AL KYNMGD+
Sbjct: 415 VDGNGTIDYIEFITATMHMNRMEREDHLYKAFEYFDKDKSGYITMEELEQALMKYNMGDS 474
Query: 480 KTIKEIIAEVDIDNDGRINYEEFAAMMRKGNPDMVGNRRRK 520
KTIKEIIAEVD D+DGRINYEEF AMMRKGNP++ NRRRK
Sbjct: 475 KTIKEIIAEVDTDHDGRINYEEFVAMMRKGNPELASNRRRK 515
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225426094|ref|XP_002272270.1| PREDICTED: calcium-dependent protein kinase 3 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 904 bits (2335), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/530 (83%), Positives = 478/530 (90%), Gaps = 12/530 (2%)
Query: 1 MGNCNGLPSSQTQLHSTTADPDTGP-----GHHPNGLKIDPPGPPRPSSSATSATS---- 51
MGNCNGLPS TQ A D G H NGL + PP P P T+A
Sbjct: 1 MGNCNGLPSGDTQFQ-INAGRDGGVRPSSHAHSSNGLNVRPPSPSPPPPPRTAAPVVHRP 59
Query: 52 -SSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDD 110
+ GRVLG+PMEDVR TYIFGRELGRGQFGVTYLVTHK+TK+QFACKSI++RKL+NRDD
Sbjct: 60 LAGNGRVLGRPMEDVRQTYIFGRELGRGQFGVTYLVTHKETKEQFACKSIATRKLVNRDD 119
Query: 111 VEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAA 170
+EDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL+M+LCAGGELFDRIIAKGHYSERAA
Sbjct: 120 IEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLVMELCAGGELFDRIIAKGHYSERAA 179
Query: 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL 230
A LCRQ+VTVVH CH+MGVMHRDLKPENFLF S+AEDSPLKATDFGLSVFFKPGDVFKDL
Sbjct: 180 AALCRQIVTVVHNCHTMGVMHRDLKPENFLFLSTAEDSPLKATDFGLSVFFKPGDVFKDL 239
Query: 231 VGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSS 290
VGSAYYVAPEVLRR+YGAEADIWSAGVIL+ILLSGVPPFWGE EQSIFD ILRGHIDFSS
Sbjct: 240 VGSAYYVAPEVLRRSYGAEADIWSAGVILFILLSGVPPFWGENEQSIFDTILRGHIDFSS 299
Query: 291 DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFR 350
DPWP+IS+SAKD+VKKML ADPKERL+A +VLNHPWM+ DG ASDKP+DIAVLTR+KQFR
Sbjct: 300 DPWPSISNSAKDLVKKMLRADPKERLTAIDVLNHPWMKEDG-ASDKPIDIAVLTRVKQFR 358
Query: 351 AMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE 410
AMNKLKKVALKVIAENLSEEEI+GLKEMFKSMDTDNSGTIT+EELK GLPKLGT+LSESE
Sbjct: 359 AMNKLKKVALKVIAENLSEEEIIGLKEMFKSMDTDNSGTITYEELKNGLPKLGTKLSESE 418
Query: 411 VRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHA 470
VRQLMEAADVDGNGTIDYIEFI+ATMHMNR+ERE+HLY+AFEYFDKD SGYITMEELEHA
Sbjct: 419 VRQLMEAADVDGNGTIDYIEFISATMHMNRMEREDHLYRAFEYFDKDKSGYITMEELEHA 478
Query: 471 LKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGNPDMVGNRRRK 520
LK+YNMGD KTIKEIIAEVD D+DGRINYEEFAAMMRKGNPD++ NRRRK
Sbjct: 479 LKRYNMGDEKTIKEIIAEVDTDHDGRINYEEFAAMMRKGNPDLITNRRRK 528
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255537639|ref|XP_002509886.1| calcium-dependent protein kinase, putative [Ricinus communis] gi|223549785|gb|EEF51273.1| calcium-dependent protein kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 899 bits (2324), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/487 (87%), Positives = 459/487 (94%), Gaps = 5/487 (1%)
Query: 34 IDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQ 93
+ P RPS A ++VGRVLG+PMEDVR+ Y FGRELGRGQFGVTYLVTHK+TKQ
Sbjct: 47 LQPTSNNRPS-----AAPAAVGRVLGRPMEDVRSIYAFGRELGRGQFGVTYLVTHKETKQ 101
Query: 94 QFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGG 153
QFACKSI++RKLINRDD+EDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL+M+LCAGG
Sbjct: 102 QFACKSIATRKLINRDDIEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLVMELCAGG 161
Query: 154 ELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKAT 213
ELFDRIIAKGHYSERAAANLCRQ+VTVVH CHSMGV+HRDLKPENFLF S+ E+SPLKAT
Sbjct: 162 ELFDRIIAKGHYSERAAANLCRQIVTVVHDCHSMGVIHRDLKPENFLFLSTDENSPLKAT 221
Query: 214 DFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGET 273
DFGLSVFFKPGD FKDLVGSAYYVAPEVLRRNYG DIWSAGVILYILLSGVPPFWGET
Sbjct: 222 DFGLSVFFKPGDTFKDLVGSAYYVAPEVLRRNYGPAIDIWSAGVILYILLSGVPPFWGET 281
Query: 274 EQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDA 333
EQ+IFD +LRGHIDFSSDPWP+ISSSAKD+VKKML AD K+R+SAAEVLNHPWMRVDGDA
Sbjct: 282 EQAIFDTVLRGHIDFSSDPWPSISSSAKDLVKKMLTADAKDRISAAEVLNHPWMRVDGDA 341
Query: 334 SDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFE 393
SDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDN+GTIT+E
Sbjct: 342 SDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNNGTITYE 401
Query: 394 ELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEY 453
ELKAGLPKLGT+LSESEV+QLMEAADVDGNGTIDYIEFITATMHMNR+ERE+HLYKAFEY
Sbjct: 402 ELKAGLPKLGTKLSESEVKQLMEAADVDGNGTIDYIEFITATMHMNRMEREDHLYKAFEY 461
Query: 454 FDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGNPDM 513
FDKD SGYITMEELEHALK+YNMGDA+TIKEIIAEVD D+DGRINYEEF AMMRKGNP++
Sbjct: 462 FDKDKSGYITMEELEHALKEYNMGDARTIKEIIAEVDTDHDGRINYEEFVAMMRKGNPEL 521
Query: 514 VGNRRRK 520
V NRRRK
Sbjct: 522 VTNRRRK 528
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224075036|ref|XP_002304529.1| calcium dependent protein kinase 22 [Populus trichocarpa] gi|222841961|gb|EEE79508.1| calcium dependent protein kinase 22 [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 897 bits (2319), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/526 (84%), Positives = 477/526 (90%), Gaps = 12/526 (2%)
Query: 1 MGNCNGLPSSQTQLHSTTADPDTGPGHHPNG-LKIDPPG---PPRPSSSATSATS--SSV 54
MGNCN LPSS + +TT D P PNG +K+ PP PPR S+ S ++V
Sbjct: 1 MGNCNSLPSSSST--TTTTDHHNTP---PNGVIKVLPPTATPPPRSQHHHHSSASGSTAV 55
Query: 55 GRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDV 114
GRVLG+P EDVRNTYIFGRELGRGQFGVTYLVTHK+TKQ FACKSI+SRKLINRDD+EDV
Sbjct: 56 GRVLGRPREDVRNTYIFGRELGRGQFGVTYLVTHKETKQHFACKSIASRKLINRDDIEDV 115
Query: 115 RREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLC 174
RREVQIMHHLTGHRNIVELKGAYED+HSVNLIM+LC GGELFDRIIAKGHYSERAAANLC
Sbjct: 116 RREVQIMHHLTGHRNIVELKGAYEDQHSVNLIMELCEGGELFDRIIAKGHYSERAAANLC 175
Query: 175 RQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSA 234
RQ+VTVVH CH+MGV+HRDLKPENFLF S+ EDSPLKATDFGLSVFFKPGDVFKDLVGSA
Sbjct: 176 RQIVTVVHNCHTMGVIHRDLKPENFLFLSTHEDSPLKATDFGLSVFFKPGDVFKDLVGSA 235
Query: 235 YYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP 294
YYVAPEVLRRNYGAE DIWSAGVILYILLSGVPPFWG+TEQ IFD+ILRGHIDFSSDPWP
Sbjct: 236 YYVAPEVLRRNYGAEVDIWSAGVILYILLSGVPPFWGDTEQVIFDSILRGHIDFSSDPWP 295
Query: 295 NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNK 354
+ISSSAKD+VK+M+ ADPKER+SA EVLNHPWMR DG ASDKPLDIAVLTRMKQFRAMNK
Sbjct: 296 SISSSAKDLVKQMVRADPKERISAVEVLNHPWMREDG-ASDKPLDIAVLTRMKQFRAMNK 354
Query: 355 LKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQL 414
LKKVALKVIAENLSEEEIMGLKEMFKSMDTDN+GTITFEELKAGLPKLGT+LSESEVRQL
Sbjct: 355 LKKVALKVIAENLSEEEIMGLKEMFKSMDTDNNGTITFEELKAGLPKLGTKLSESEVRQL 414
Query: 415 MEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY 474
MEAADVDGNGTIDYIEFITATMHMNR+ERE+HLYKAFEYFDKD SGYITMEELE AL KY
Sbjct: 415 MEAADVDGNGTIDYIEFITATMHMNRMEREDHLYKAFEYFDKDKSGYITMEELEQALVKY 474
Query: 475 NMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGNPDMVGNRRRK 520
NMGD KTIKEIIAEVD D+DGRINYEEF AMMRKGNP++ RRRK
Sbjct: 475 NMGDTKTIKEIIAEVDTDHDGRINYEEFVAMMRKGNPELAPTRRRK 520
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356497285|ref|XP_003517491.1| PREDICTED: calcium-dependent protein kinase 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 890 bits (2300), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/520 (83%), Positives = 465/520 (89%), Gaps = 15/520 (2%)
Query: 1 MGNCNGLPSSQTQLHSTTADPDTGPGHHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGK 60
MGNCN SSQTQ HS D P + NG+ + PP + SVGRVLG+
Sbjct: 1 MGNCNSEASSQTQPHS---DHHPQPRSNSNGITVLPPN-----------SKPSVGRVLGR 46
Query: 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
PMEDVR+TY FGRELGRGQFGVTYLVTHK TKQQFACKSI++ KL++RDD+EDVRREVQI
Sbjct: 47 PMEDVRSTYTFGRELGRGQFGVTYLVTHKHTKQQFACKSIATPKLVHRDDLEDVRREVQI 106
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTV 180
MHHLTGHRNIVELKGAYEDRHSVNLIM+LC GGELFDRIIAKGHYSERAAA+LCRQ+VTV
Sbjct: 107 MHHLTGHRNIVELKGAYEDRHSVNLIMELCGGGELFDRIIAKGHYSERAAADLCRQIVTV 166
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE 240
VH CH+MGVMHRDLKPENFLF S E+SPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE
Sbjct: 167 VHDCHTMGVMHRDLKPENFLFLSKDENSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE 226
Query: 241 VLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300
VLRR+YG EADIWSAGVIL+ILLSGVPPFW + EQ IFDAILRGHIDF+SDPWP+ISSSA
Sbjct: 227 VLRRSYGPEADIWSAGVILFILLSGVPPFWSKKEQGIFDAILRGHIDFTSDPWPSISSSA 286
Query: 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVAL 360
KD+VKKML ADPK+RLSA EVL+HPWMR DG ASDKPLD+AVL+RMKQFRAMNKLKKVAL
Sbjct: 287 KDLVKKMLRADPKQRLSAVEVLDHPWMREDG-ASDKPLDVAVLSRMKQFRAMNKLKKVAL 345
Query: 361 KVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADV 420
KVIAENLSEEEI+GLKEMFKSMDTDNSGTITFEELKAGLPKLGT++SESEVRQLMEAADV
Sbjct: 346 KVIAENLSEEEIIGLKEMFKSMDTDNSGTITFEELKAGLPKLGTKVSESEVRQLMEAADV 405
Query: 421 DGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAK 480
DGNGTIDYIEFITATMHMNR+ERE+HLYKAFEYFDKD SGYITMEELE LKKYNMGD K
Sbjct: 406 DGNGTIDYIEFITATMHMNRMEREDHLYKAFEYFDKDRSGYITMEELESTLKKYNMGDEK 465
Query: 481 TIKEIIAEVDIDNDGRINYEEFAAMMRKGNPDMVGNRRRK 520
TIKEII EVD DNDGRINY+EF AMMRKG PD+V NRRRK
Sbjct: 466 TIKEIIVEVDTDNDGRINYDEFVAMMRKGKPDLVTNRRRK 505
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147814808|emb|CAN61364.1| hypothetical protein VITISV_032639 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 886 bits (2290), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/466 (89%), Positives = 451/466 (96%), Gaps = 1/466 (0%)
Query: 55 GRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDV 114
GRVLG+PMEDVR TYIFGRELGRGQFGVTYLVTHK+TK+QFACKSI++RKL+NRDD+EDV
Sbjct: 18 GRVLGRPMEDVRQTYIFGRELGRGQFGVTYLVTHKETKEQFACKSIATRKLVNRDDIEDV 77
Query: 115 RREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLC 174
RREVQIMHHLTGHRNIVELKGAYEDRHSVNL+M+LCAGGELFDRIIAKGHYSERAAA LC
Sbjct: 78 RREVQIMHHLTGHRNIVELKGAYEDRHSVNLVMELCAGGELFDRIIAKGHYSERAAAALC 137
Query: 175 RQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSA 234
RQ+VTVVH CH+MGVMHRDLKPENFLF S+AEDSPLKATDFGLSVFFKPGDVFKDLVGSA
Sbjct: 138 RQIVTVVHNCHTMGVMHRDLKPENFLFLSTAEDSPLKATDFGLSVFFKPGDVFKDLVGSA 197
Query: 235 YYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP 294
YYVAPEVLRR+YGAEADIWSAGVIL+ILLSGVPPFWGE EQSIFD ILRGHIDFSSDPWP
Sbjct: 198 YYVAPEVLRRSYGAEADIWSAGVILFILLSGVPPFWGENEQSIFDTILRGHIDFSSDPWP 257
Query: 295 NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNK 354
+IS+SAKD+VKKML ADPKERL+A +VLNHPWM+ DG ASDKP+DIAVLTR+KQFRAMNK
Sbjct: 258 SISNSAKDLVKKMLRADPKERLTAIDVLNHPWMKEDG-ASDKPIDIAVLTRVKQFRAMNK 316
Query: 355 LKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQL 414
LKKVALKVIAENLSEEEI+GLKEMFKSMDTDNSGTIT+EELK GLPKLGT+LSESEVRQL
Sbjct: 317 LKKVALKVIAENLSEEEIIGLKEMFKSMDTDNSGTITYEELKNGLPKLGTKLSESEVRQL 376
Query: 415 MEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY 474
MEAADVDGNGTIDYIEFI+ATMHMNR+ERE+HLY+AFEYFDKD SGYITMEELEHALK+Y
Sbjct: 377 MEAADVDGNGTIDYIEFISATMHMNRMEREDHLYRAFEYFDKDKSGYITMEELEHALKRY 436
Query: 475 NMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGNPDMVGNRRRK 520
NMGD KTIKEIIAEVD D+DGRINYEEFAAMMRKGNPD++ NRRRK
Sbjct: 437 NMGDEKTIKEIIAEVDTDHDGRINYEEFAAMMRKGNPDLITNRRRK 482
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356539541|ref|XP_003538256.1| PREDICTED: calcium-dependent protein kinase 3-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 885 bits (2288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/520 (83%), Positives = 464/520 (89%), Gaps = 15/520 (2%)
Query: 1 MGNCNGLPSSQTQLHSTTADPDTGPGHHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGK 60
MGNCN PSSQTQ HS NG+ + PP + SVGRVLG+
Sbjct: 1 MGNCNSEPSSQTQPHSDHHHHHP---QPSNGITVLPPN-----------SKPSVGRVLGR 46
Query: 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
PMED R+TY FGRELGRGQFGVTY VTHK TKQQFACKSI++RKL++RDD+EDVRREVQI
Sbjct: 47 PMEDARSTYTFGRELGRGQFGVTYQVTHKHTKQQFACKSIATRKLVHRDDLEDVRREVQI 106
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTV 180
MHHLTGHRNIVELKGAYEDRHSVNLIM+LC GGELFDRIIAKGHYSERAAA+LCRQ+VTV
Sbjct: 107 MHHLTGHRNIVELKGAYEDRHSVNLIMELCGGGELFDRIIAKGHYSERAAADLCRQIVTV 166
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE 240
VH CH+MGVMHRDLKPENFLF S E+SPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE
Sbjct: 167 VHDCHTMGVMHRDLKPENFLFLSKDENSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE 226
Query: 241 VLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300
VLRR+YG ADIWSAGVIL+ILLSGVPPFW E EQ IFDAILRGHIDF+SDPWP+ISSSA
Sbjct: 227 VLRRSYGPGADIWSAGVILFILLSGVPPFWSEKEQGIFDAILRGHIDFASDPWPSISSSA 286
Query: 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVAL 360
KD+VKKML ADPK+RLSA EVLNHPWMR DG ASDKPLD+AVL+RMKQFRAMNKLKKVAL
Sbjct: 287 KDLVKKMLRADPKQRLSAVEVLNHPWMREDG-ASDKPLDVAVLSRMKQFRAMNKLKKVAL 345
Query: 361 KVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADV 420
KVIAENLSEEEI+GLKEMFKSMDTDNSGTITFEELKAGLPKLGT++SESEVRQLMEAADV
Sbjct: 346 KVIAENLSEEEIIGLKEMFKSMDTDNSGTITFEELKAGLPKLGTKVSESEVRQLMEAADV 405
Query: 421 DGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAK 480
DGNGTIDYIEFITATMHMNR+ERE+HLYKAFEYFDKD SGYIT+EELE ALKKYNMGD K
Sbjct: 406 DGNGTIDYIEFITATMHMNRMEREDHLYKAFEYFDKDRSGYITVEELESALKKYNMGDEK 465
Query: 481 TIKEIIAEVDIDNDGRINYEEFAAMMRKGNPDMVGNRRRK 520
TIKEIIAEVD DNDGRINY+EF AMMRKGNPD+V NRRRK
Sbjct: 466 TIKEIIAEVDADNDGRINYDEFVAMMRKGNPDLVNNRRRK 505
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356513317|ref|XP_003525360.1| PREDICTED: calcium-dependent protein kinase 3-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 884 bits (2284), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/529 (82%), Positives = 469/529 (88%), Gaps = 20/529 (3%)
Query: 1 MGNCN---GLPSSQTQLHSTTADPDTGPGHHPNGLKIDPPGP----PRPSSSATSATSSS 53
MGNC+ G P++ + H H NG+ + PP P TS++SSS
Sbjct: 1 MGNCSSGAGAPTTYSDDHP-----------HHNGITVLPPNSNPSPQLPKPPPTSSSSSS 49
Query: 54 VGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED 113
+GRVLG+PMEDVR+ YIFGRELGRGQFGVTYLVTHK TK+QFACKSI++RKL+NRDD++D
Sbjct: 50 LGRVLGRPMEDVRSIYIFGRELGRGQFGVTYLVTHKATKEQFACKSIATRKLVNRDDIDD 109
Query: 114 VRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL 173
+RREVQIMHHLTGHRNIVELKGAYEDRHSVNL+M+LCAGGELFDRII KGHYSERAAAN
Sbjct: 110 IRREVQIMHHLTGHRNIVELKGAYEDRHSVNLVMELCAGGELFDRIITKGHYSERAAANS 169
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
CRQ+VTVVH CHSMGVMHRDLKPENFL + +DSPLKATDFGLSVFFKPGDVF+DLVGS
Sbjct: 170 CRQIVTVVHNCHSMGVMHRDLKPENFLLLNKNDDSPLKATDFGLSVFFKPGDVFRDLVGS 229
Query: 234 AYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPW 293
AYYVAPEVLRR+YG EADIWSAGVILYILLSGVPPFW E EQ IFDAILRGHIDF+SDPW
Sbjct: 230 AYYVAPEVLRRSYGPEADIWSAGVILYILLSGVPPFWAENEQGIFDAILRGHIDFASDPW 289
Query: 294 PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMN 353
P+ISSSAKD+VKKML ADPKERLSA EVLNHPWMRVDGDA DKPLDIAVLTRMKQFRAMN
Sbjct: 290 PSISSSAKDLVKKMLRADPKERLSAVEVLNHPWMRVDGDAPDKPLDIAVLTRMKQFRAMN 349
Query: 354 KLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQ 413
KLKKVALKVIAENLSEEEI+GLKEMFKSMDTDNSGTITFEELKAGLPKLGT+LSESEVRQ
Sbjct: 350 KLKKVALKVIAENLSEEEIIGLKEMFKSMDTDNSGTITFEELKAGLPKLGTKLSESEVRQ 409
Query: 414 LMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKK 473
LMEAADVDGNGTIDYIEFITATMHMNR+ERE+HLYKAFEYFD D SGYITMEELE ALKK
Sbjct: 410 LMEAADVDGNGTIDYIEFITATMHMNRMEREDHLYKAFEYFDNDKSGYITMEELESALKK 469
Query: 474 YNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGNPDM--VGNRRRK 520
YNMGD KTIKEIIAEVD DNDGRINY+EF AMMRKGNPD+ + RRRK
Sbjct: 470 YNMGDEKTIKEIIAEVDTDNDGRINYDEFVAMMRKGNPDITHITQRRRK 518
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356513319|ref|XP_003525361.1| PREDICTED: calcium-dependent protein kinase 3-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/543 (79%), Positives = 469/543 (86%), Gaps = 34/543 (6%)
Query: 1 MGNCN---GLPSSQTQLHSTTADPDTGPGHHPNGLKIDPPGP----PRPSSSATSATSSS 53
MGNC+ G P++ + H H NG+ + PP P TS++SSS
Sbjct: 1 MGNCSSGAGAPTTYSDDHP-----------HHNGITVLPPNSNPSPQLPKPPPTSSSSSS 49
Query: 54 VGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED 113
+GRVLG+PMEDVR+ YIFGRELGRGQFGVTYLVTHK TK+QFACKSI++RKL+NRDD++D
Sbjct: 50 LGRVLGRPMEDVRSIYIFGRELGRGQFGVTYLVTHKATKEQFACKSIATRKLVNRDDIDD 109
Query: 114 VRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL 173
+RREVQIMHHLTGHRNIVELKGAYEDRHSVNL+M+LCAGGELFDRII KGHYSERAAAN
Sbjct: 110 IRREVQIMHHLTGHRNIVELKGAYEDRHSVNLVMELCAGGELFDRIITKGHYSERAAANS 169
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
CRQ+VTVVH CHSMGVMHRDLKPENFL + +DSPLKATDFGLSVFFKPGDVF+DLVGS
Sbjct: 170 CRQIVTVVHNCHSMGVMHRDLKPENFLLLNKNDDSPLKATDFGLSVFFKPGDVFRDLVGS 229
Query: 234 AYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWG------------ETEQSIFDAI 281
AYYVAPEVLRR+YG EADIWSAGVILYILLSGVPPFW E EQ IFDAI
Sbjct: 230 AYYVAPEVLRRSYGPEADIWSAGVILYILLSGVPPFWAGIFTLFVNLLCEENEQGIFDAI 289
Query: 282 LRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIA 341
LRGHIDF+SDPWP+ISSSAKD+VKKML ADPKERLSA EVLNHPWMRVDGDA DKPLDIA
Sbjct: 290 LRGHIDFASDPWPSISSSAKDLVKKMLRADPKERLSAVEVLNHPWMRVDGDAPDKPLDIA 349
Query: 342 VLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPK 401
VLTRMKQFRAMNKLKKVALKVIAENLSEEEI+GLKEMFKSMDTDNSGTITFEELKAGLPK
Sbjct: 350 VLTRMKQFRAMNKLKKVALKVIAENLSEEEIIGLKEMFKSMDTDNSGTITFEELKAGLPK 409
Query: 402 LGTRLSESEVRQLMEA--ADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
LGT+LSESEVRQLMEA ADVDGNGTIDYIEFITATMHMNR+ERE+HLYKAFEYFD D S
Sbjct: 410 LGTKLSESEVRQLMEAVSADVDGNGTIDYIEFITATMHMNRMEREDHLYKAFEYFDNDKS 469
Query: 460 GYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGNPDM--VGNR 517
GYITMEELE ALKKYNMGD KTIKEIIAEVD DNDGRINY+EF AMMRKGNPD+ + R
Sbjct: 470 GYITMEELESALKKYNMGDEKTIKEIIAEVDTDNDGRINYDEFVAMMRKGNPDITHITQR 529
Query: 518 RRK 520
RRK
Sbjct: 530 RRK 532
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|114804153|gb|ABC47163.2| CDPK1 [Ipomoea nil] gi|397746248|gb|AFO63177.1| calcium dependent protein kinase 1 [Ipomoea nil] | Back alignment and taxonomy information |
|---|
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/528 (79%), Positives = 466/528 (88%), Gaps = 22/528 (4%)
Query: 1 MGNCNGLPSSQTQLHSTTADPDTGPGHHPNGLKIDPPGPPRPSSSATSATS--------S 52
MG+CN +PSS +T+A G + DPP PP+ + + S
Sbjct: 1 MGSCNSIPSSP--FAATSA-----------GGESDPP-PPKNDITVLPPSQPPPPRPFLS 46
Query: 53 SVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVE 112
VGRVLG+PMEDV +TYIFG ELGRGQFGVTYLVTH+ T+++ ACKSI++RKL+++DDV+
Sbjct: 47 GVGRVLGRPMEDVHSTYIFGGELGRGQFGVTYLVTHRKTRERLACKSIATRKLLSKDDVD 106
Query: 113 DVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAAN 172
DVRREVQIMHHLTGHRNIVELKG YEDR+ V+L+M+LCAGGELFDRIIAKGHYSERAAA
Sbjct: 107 DVRREVQIMHHLTGHRNIVELKGTYEDRNHVHLVMELCAGGELFDRIIAKGHYSERAAAG 166
Query: 173 LCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVG 232
LCRQMVTV+HYCHSMGVMHRDLKPENFLF SS E+SPLKATDFGLSVFFKPGD FKDLVG
Sbjct: 167 LCRQMVTVLHYCHSMGVMHRDLKPENFLFLSSDENSPLKATDFGLSVFFKPGDTFKDLVG 226
Query: 233 SAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292
SAYYVAPEVLRRNYG EADIWSAGVILYILLSGVPPFWGE EQSIFDA+LRGH+DFSSDP
Sbjct: 227 SAYYVAPEVLRRNYGPEADIWSAGVILYILLSGVPPFWGENEQSIFDAVLRGHLDFSSDP 286
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAM 352
WP+ISSSAKD+VKKML +DPKERLSA +VLNHPWMR DGDASDKP+DIA L+RMKQFRAM
Sbjct: 287 WPSISSSAKDLVKKMLRSDPKERLSATDVLNHPWMREDGDASDKPIDIAALSRMKQFRAM 346
Query: 353 NKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVR 412
NKLKKVALKVIAENLSEEEI+GLKEMFKS+DTD+SGTIT+EELKAGL K+GT+LSESEVR
Sbjct: 347 NKLKKVALKVIAENLSEEEIIGLKEMFKSIDTDDSGTITYEELKAGLTKMGTKLSESEVR 406
Query: 413 QLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALK 472
QLMEAADVDGNGTIDY+EFITATMHMNRVERE+HLYKAFEYFDKD SGYITMEELEH+LK
Sbjct: 407 QLMEAADVDGNGTIDYLEFITATMHMNRVEREDHLYKAFEYFDKDKSGYITMEELEHSLK 466
Query: 473 KYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGNPDMVGNRRRK 520
KYN+ D KTIKEII EVD DNDG+INY+EF AMMRKG PD+V NRRR+
Sbjct: 467 KYNITDEKTIKEIIVEVDTDNDGKINYDEFVAMMRKGTPDLVINRRRR 514
|
Source: Ipomoea nil Species: Ipomoea nil Genus: Ipomoea Family: Convolvulaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 520 | ||||||
| TAIR|locus:2128409 | 529 | CDPK6 "calcium-dependent prote | 0.888 | 0.873 | 0.809 | 1.1e-208 | |
| TAIR|locus:2177023 | 528 | CPK17 "calcium-dependent prote | 0.890 | 0.876 | 0.745 | 3.6e-192 | |
| TAIR|locus:2150225 | 523 | CPK34 "AT5G19360" [Arabidopsis | 0.890 | 0.885 | 0.742 | 2.9e-190 | |
| TAIR|locus:2015846 | 521 | CPK33 "calcium-dependent prote | 0.873 | 0.871 | 0.722 | 1.3e-180 | |
| TAIR|locus:2092399 | 541 | CPK9 "calmodulin-domain protei | 0.873 | 0.839 | 0.715 | 3.4e-180 | |
| TAIR|locus:2138897 | 531 | CPK21 "calcium-dependent prote | 0.878 | 0.860 | 0.689 | 1.1e-174 | |
| TAIR|locus:2204340 | 561 | CPK29 "calcium-dependent prote | 0.873 | 0.809 | 0.679 | 6.7e-173 | |
| TAIR|locus:2036783 | 551 | CPK19 "calcium-dependent prote | 0.865 | 0.816 | 0.676 | 7.6e-167 | |
| TAIR|locus:2827528 | 544 | CPK6 "calcium dependent protei | 0.886 | 0.847 | 0.654 | 5.5e-164 | |
| TAIR|locus:2175503 | 610 | CPK1 "calcium dependent protei | 0.869 | 0.740 | 0.657 | 7.1e-164 |
| TAIR|locus:2128409 CDPK6 "calcium-dependent protein kinase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2018 (715.4 bits), Expect = 1.1e-208, P = 1.1e-208
Identities = 374/462 (80%), Positives = 427/462 (92%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
LG+PME+VR TY FGRELGRGQFGVTYLVTHK+TKQQ ACKSI +R+L+++DD+EDVRRE
Sbjct: 67 LGRPMEEVRRTYEFGRELGRGQFGVTYLVTHKETKQQVACKSIPTRRLVHKDDIEDVRRE 126
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQM 177
VQIMHHL+GHRNIV+LKGAYEDRHSVNLIM+LC GGELFDRII+KG YSERAAA+LCRQM
Sbjct: 127 VQIMHHLSGHRNIVDLKGAYEDRHSVNLIMELCEGGELFDRIISKGLYSERAAADLCRQM 186
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV 237
V VVH CHSMGVMHRDLKPENFLF S E+SPLKATDFGLSVFFKPGD FKDLVGSAYYV
Sbjct: 187 VMVVHSCHSMGVMHRDLKPENFLFLSKDENSPLKATDFGLSVFFKPGDKFKDLVGSAYYV 246
Query: 238 APEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
APEVL+RNYG EADIWSAGVILYILLSGVPPFWGE E IFDAIL+G +DFS+DPWP +S
Sbjct: 247 APEVLKRNYGPEADIWSAGVILYILLSGVPPFWGENETGIFDAILQGQLDFSADPWPALS 306
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKK 357
AKD+V+KML DPK+RL+AAEVLNHPW+R DG+ASDKPLD AVL+RMKQFRAMNKLKK
Sbjct: 307 DGAKDLVRKMLKYDPKDRLTAAEVLNHPWIREDGEASDKPLDNAVLSRMKQFRAMNKLKK 366
Query: 358 VALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEA 417
+ALKVIAENLSEEEI+GLKEMFKS+DTDN+G +T EEL+ GLPKLG+++SE+E+RQLMEA
Sbjct: 367 MALKVIAENLSEEEIIGLKEMFKSLDTDNNGIVTLEELRTGLPKLGSKISEAEIRQLMEA 426
Query: 418 ADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG 477
AD+DG+G+IDY+EFI+ATMHMNR+ERE+HLY AF++FD DNSGYITMEELE A+KKYNMG
Sbjct: 427 ADMDGDGSIDYLEFISATMHMNRIEREDHLYTAFQFFDNDNSGYITMEELELAMKKYNMG 486
Query: 478 DAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGNPDMVGNRRR 519
D K+IKEIIAEVD D DG+INYEEF AMM+KGNP++V NRRR
Sbjct: 487 DDKSIKEIIAEVDTDRDGKINYEEFVAMMKKGNPELVPNRRR 528
|
|
| TAIR|locus:2177023 CPK17 "calcium-dependent protein kinase 17" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1862 (660.5 bits), Expect = 3.6e-192, P = 3.6e-192
Identities = 345/463 (74%), Positives = 407/463 (87%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
LG+PMEDV+ +Y G+ELGRGQFGVT+L T K T QFACK+I+ RKL+N++D+EDVRRE
Sbjct: 62 LGRPMEDVKASYSLGKELGRGQFGVTHLCTQKATGHQFACKTIAKRKLVNKEDIEDVRRE 121
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQM 177
VQIMHHLTG NIVELKGAYED+HSV+L+M+LCAGGELFDRIIAKGHYSERAAA+L R +
Sbjct: 122 VQIMHHLTGQPNIVELKGAYEDKHSVHLVMELCAGGELFDRIIAKGHYSERAAASLLRTI 181
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV 237
V +VH CHSMGV+HRDLKPENFL + E+SPLKATDFGLSVF+KPG+VFKD+VGSAYY+
Sbjct: 182 VQIVHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKPGEVFKDIVGSAYYI 241
Query: 238 APEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
APEVL+R YG EADIWS GV+LYILL GVPPFW E+E IF+AILRGH+DFSSDPWP+IS
Sbjct: 242 APEVLKRKYGPEADIWSIGVMLYILLCGVPPFWAESENGIFNAILRGHVDFSSDPWPSIS 301
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKK 357
AKD+VKKML++DPK+RL+AA+VLNHPW++ DG+A D PLD AV++R+KQF+AMN KK
Sbjct: 302 PQAKDLVKKMLNSDPKQRLTAAQVLNHPWIKEDGEAPDVPLDNAVMSRLKQFKAMNNFKK 361
Query: 358 VALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEA 417
VAL+VIA LSEEEIMGLKEMFK MDTD+SGTIT EEL+ GL K GTRLSE EV+QLMEA
Sbjct: 362 VALRVIAGCLSEEEIMGLKEMFKGMDTDSSGTITLEELRQGLAKQGTRLSEYEVQQLMEA 421
Query: 418 ADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG 477
AD DGNGTIDY EFI ATMH+NR++REEHLY AF++FDKDNSGYITMEELE AL+++ M
Sbjct: 422 ADADGNGTIDYGEFIAATMHINRLDREEHLYSAFQHFDKDNSGYITMEELEQALREFGMN 481
Query: 478 DAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGNPDMVGNRRRK 520
D + IKEII+EVD DNDGRINY+EF AMMRKGNPD + +RR+
Sbjct: 482 DGRDIKEIISEVDGDNDGRINYDEFVAMMRKGNPDPIPKKRRE 524
|
|
| TAIR|locus:2150225 CPK34 "AT5G19360" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1844 (654.2 bits), Expect = 2.9e-190, P = 2.9e-190
Identities = 344/463 (74%), Positives = 403/463 (87%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
LG+PMEDV+++Y G+ELGRGQFGVT+L T K T QFACK+I+ RKL+N++D+EDVRRE
Sbjct: 57 LGRPMEDVKSSYTLGKELGRGQFGVTHLCTQKATGLQFACKTIAKRKLVNKEDIEDVRRE 116
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQM 177
VQIMHHLTG NIVELKGAYED+HSV+L+M+LCAGGELFDRIIAKGHYSERAAA+L R +
Sbjct: 117 VQIMHHLTGQPNIVELKGAYEDKHSVHLVMELCAGGELFDRIIAKGHYSERAAASLLRTI 176
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV 237
V ++H CHSMGV+HRDLKPENFL S E+SPLKATDFGLSVF+KPG+VFKD+VGSAYY+
Sbjct: 177 VQIIHTCHSMGVIHRDLKPENFLLLSKDENSPLKATDFGLSVFYKPGEVFKDIVGSAYYI 236
Query: 238 APEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
APEVLRR YG EADIWS GV+LYILL GVPPFW E+E IF+AIL G +DFSSDPWP IS
Sbjct: 237 APEVLRRKYGPEADIWSIGVMLYILLCGVPPFWAESENGIFNAILSGQVDFSSDPWPVIS 296
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKK 357
AKD+V+KML++DPK+RL+AA+VLNHPW++ DG+A D PLD AV++R+KQF+AMN KK
Sbjct: 297 PQAKDLVRKMLNSDPKQRLTAAQVLNHPWIKEDGEAPDVPLDNAVMSRLKQFKAMNNFKK 356
Query: 358 VALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEA 417
VAL+VIA LSEEEIMGLKEMFK MDTDNSGTIT EEL+ GL K GTRLSE EV+QLMEA
Sbjct: 357 VALRVIAGCLSEEEIMGLKEMFKGMDTDNSGTITLEELRQGLAKQGTRLSEYEVQQLMEA 416
Query: 418 ADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG 477
AD DGNGTIDY EFI ATMH+NR++REEHLY AF++FDKDNSGYIT EELE AL+++ M
Sbjct: 417 ADADGNGTIDYGEFIAATMHINRLDREEHLYSAFQHFDKDNSGYITTEELEQALREFGMN 476
Query: 478 DAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGNPDMVGNRRRK 520
D + IKEII+EVD DNDGRINYEEF AMMRKGNPD +RR+
Sbjct: 477 DGRDIKEIISEVDGDNDGRINYEEFVAMMRKGNPDPNPKKRRE 519
|
|
| TAIR|locus:2015846 CPK33 "calcium-dependent protein kinase 33" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1753 (622.1 bits), Expect = 1.3e-180, P = 1.3e-180
Identities = 328/454 (72%), Positives = 387/454 (85%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L KP EDV+ Y +ELGRGQFGVTYL T K T ++FACKSIS +KL+ + D ED+RRE
Sbjct: 62 LEKPYEDVKLFYTLSKELGRGQFGVTYLCTEKSTGKRFACKSISKKKLVTKGDKEDMRRE 121
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQM 177
+QIM HL+G NIVE KGAYED +VNL+M+LCAGGELFDRI+AKGHYSERAAA++CRQ+
Sbjct: 122 IQIMQHLSGQPNIVEFKGAYEDEKAVNLVMELCAGGELFDRILAKGHYSERAAASVCRQI 181
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV 237
V VV+ CH MGVMHRDLKPENFL SS E + +KATDFGLSVF + G V+KD+VGSAYYV
Sbjct: 182 VNVVNICHFMGVMHRDLKPENFLLSSKDEKALIKATDFGLSVFIEEGRVYKDIVGSAYYV 241
Query: 238 APEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
APEVL+R YG E DIWSAG+ILYILLSGVPPFW ETE+ IFDAIL G IDF S PWP+IS
Sbjct: 242 APEVLKRRYGKEIDIWSAGIILYILLSGVPPFWAETEKGIFDAILEGEIDFESQPWPSIS 301
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKK 357
+SAKD+V++ML DPK R+SAAEVL HPW+R G+ASDKP+D AVL+RMKQFRAMNKLKK
Sbjct: 302 NSAKDLVRRMLTQDPKRRISAAEVLKHPWLREGGEASDKPIDSAVLSRMKQFRAMNKLKK 361
Query: 358 VALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEA 417
+ALKVIAEN+ EEI GLK MF ++DTDNSGTIT+EELK GL KLG+RL+E+EV+QLM+A
Sbjct: 362 LALKVIAENIDTEEIQGLKAMFANIDTDNSGTITYEELKEGLAKLGSRLTEAEVKQLMDA 421
Query: 418 ADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG 477
ADVDGNG+IDYIEFITATMH +R+E E++YKAF++FDKD SGYIT +ELE ALK+Y MG
Sbjct: 422 ADVDGNGSIDYIEFITATMHRHRLESNENVYKAFQHFDKDGSGYITTDELEAALKEYGMG 481
Query: 478 DAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGNP 511
D TIKEI+++VD DNDGRINY+EF AMMR GNP
Sbjct: 482 DDATIKEILSDVDADNDGRINYDEFCAMMRSGNP 515
|
|
| TAIR|locus:2092399 CPK9 "calmodulin-domain protein kinase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1749 (620.7 bits), Expect = 3.4e-180, P = 3.4e-180
Identities = 325/454 (71%), Positives = 388/454 (85%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L EDV+ Y G+ELGRGQFGVTYL T T +++ACKSIS +KL+ + D +D+RRE
Sbjct: 80 LENAFEDVKLFYTLGKELGRGQFGVTYLCTENSTGKKYACKSISKKKLVTKADKDDMRRE 139
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQM 177
+QIM HL+G NIVE KGAYED +VNL+M+LCAGGELFDRIIAKGHY+ERAAA++CRQ+
Sbjct: 140 IQIMQHLSGQPNIVEFKGAYEDEKAVNLVMELCAGGELFDRIIAKGHYTERAAASVCRQI 199
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV 237
V VV CH MGV+HRDLKPENFL SS E + +KATDFGLSVF + G V++D+VGSAYYV
Sbjct: 200 VNVVKICHFMGVLHRDLKPENFLLSSKDEKALIKATDFGLSVFIEEGKVYRDIVGSAYYV 259
Query: 238 APEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
APEVLRR YG E DIWSAG+ILYILLSGVPPFW ETE+ IFDAIL GHIDF S PWP+IS
Sbjct: 260 APEVLRRRYGKEVDIWSAGIILYILLSGVPPFWAETEKGIFDAILEGHIDFESQPWPSIS 319
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKK 357
SSAKD+V++ML ADPK R+SAA+VL HPW+R G+ASDKP+D AVL+RMKQFRAMNKLKK
Sbjct: 320 SSAKDLVRRMLTADPKRRISAADVLQHPWLREGGEASDKPIDSAVLSRMKQFRAMNKLKK 379
Query: 358 VALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEA 417
+ALKVIAEN+ EEI GLK MF ++DTDNSGTIT+EELK GL KLG++L+E+EV+QLM+A
Sbjct: 380 LALKVIAENIDTEEIQGLKAMFANIDTDNSGTITYEELKEGLAKLGSKLTEAEVKQLMDA 439
Query: 418 ADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG 477
ADVDGNG+IDYIEFITATMH +R+E E+LYKAF++FDKD+SGYIT++ELE ALK+Y MG
Sbjct: 440 ADVDGNGSIDYIEFITATMHRHRLESNENLYKAFQHFDKDSSGYITIDELESALKEYGMG 499
Query: 478 DAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGNP 511
D TIKE++++VD DNDGRINYEEF AMMR GNP
Sbjct: 500 DDATIKEVLSDVDSDNDGRINYEEFCAMMRSGNP 533
|
|
| TAIR|locus:2138897 CPK21 "calcium-dependent protein kinase 21" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1697 (602.4 bits), Expect = 1.1e-174, P = 1.1e-174
Identities = 316/458 (68%), Positives = 385/458 (84%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
LGKP ED+R Y G+ELGRGQFG+TY+ T +ACKSI RKLI++ D EDV+RE
Sbjct: 69 LGKPFEDIRKFYSLGKELGRGQFGITYMCKEIGTGNTYACKSILKRKLISKQDKEDVKRE 128
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQM 177
+QIM +L+G NIVE+KGAYEDR S++L+M+LCAGGELFDRIIA+GHYSERAAA + R +
Sbjct: 129 IQIMQYLSGQPNIVEIKGAYEDRQSIHLVMELCAGGELFDRIIAQGHYSERAAAGIIRSI 188
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV 237
V VV CH MGV+HRDLKPENFL SS E++ LKATDFGLSVF + G V++D+VGSAYYV
Sbjct: 189 VNVVQICHFMGVVHRDLKPENFLLSSKEENAMLKATDFGLSVFIEEGKVYRDIVGSAYYV 248
Query: 238 APEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
APEVLRR+YG E DIWSAGVILYILLSGVPPFW E E+ IFD +++G IDF S+PWP+IS
Sbjct: 249 APEVLRRSYGKEIDIWSAGVILYILLSGVPPFWAENEKGIFDEVIKGEIDFVSEPWPSIS 308
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKK 357
SAKD+V+KML DPK R++AA+VL HPW++ G+A DKP+D AVL+RMKQFRAMNKLKK
Sbjct: 309 ESAKDLVRKMLTKDPKRRITAAQVLEHPWIK-GGEAPDKPIDSAVLSRMKQFRAMNKLKK 367
Query: 358 VALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEA 417
+ALKVIAE+LSEEEI GLK MF ++DTD SGTIT+EELK GL +LG+RLSE+EV+QLMEA
Sbjct: 368 LALKVIAESLSEEEIKGLKTMFANIDTDKSGTITYEELKTGLTRLGSRLSETEVKQLMEA 427
Query: 418 ADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG 477
ADVDGNGTIDY EFI+ATMH +++R+EH+YKAF++FDKDNSG+IT +ELE A+K+Y MG
Sbjct: 428 ADVDGNGTIDYYEFISATMHRYKLDRDEHVYKAFQHFDKDNSGHITRDELESAMKEYGMG 487
Query: 478 DAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGNPDMVG 515
D +IKE+I+EVD DNDGRIN+EEF AMMR G+ G
Sbjct: 488 DEASIKEVISEVDTDNDGRINFEEFCAMMRSGSTQPQG 525
|
|
| TAIR|locus:2204340 CPK29 "calcium-dependent protein kinase 29" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1662 (590.1 bits), Expect = 6.7e-173, Sum P(2) = 6.7e-173
Identities = 309/455 (67%), Positives = 378/455 (83%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L +PM D+ Y +ELGRGQFG+TY T K +++ACKSIS RKLI R D+EDVRRE
Sbjct: 101 LNRPMIDLSALYDLHKELGRGQFGITYKCTDKSNGREYACKSISKRKLIRRKDIEDVRRE 160
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQM 177
V I+ HLTG NIVE +GAYED+ +++L+M+LC+GGELFDRII KG YSE+ AAN+ RQ+
Sbjct: 161 VMILQHLTGQPNIVEFRGAYEDKDNLHLVMELCSGGELFDRIIKKGSYSEKEAANIFRQI 220
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV 237
V VVH CH MGV+HRDLKPENFL S+ EDSP+KATDFGLSVF + G V++D+VGSAYYV
Sbjct: 221 VNVVHVCHFMGVVHRDLKPENFLLVSNEEDSPIKATDFGLSVFIEEGKVYRDIVGSAYYV 280
Query: 238 APEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
APEVL RNYG E D+WSAGV+LYILLSGVPPFWGETE++IF+AIL G +D + PWP IS
Sbjct: 281 APEVLHRNYGKEIDVWSAGVMLYILLSGVPPFWGETEKTIFEAILEGKLDLETSPWPTIS 340
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKK 357
SAKD+++KML DPK+R++AAE L HPWM D SDKP++ AVL RMKQFRAMNKLKK
Sbjct: 341 ESAKDLIRKMLIRDPKKRITAAEALEHPWM-TDTKISDKPINSAVLVRMKQFRAMNKLKK 399
Query: 358 VALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEA 417
+ALKVIAENLSEEEI GLK+ FK+MDTD SGTITF+EL+ GL +LG++L+ESE++QLMEA
Sbjct: 400 LALKVIAENLSEEEIKGLKQTFKNMDTDESGTITFDELRNGLHRLGSKLTESEIKQLMEA 459
Query: 418 ADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG 477
ADVD +GTIDYIEF+TATMH +R+E+EE+L +AF+YFDKD SG+IT +EL+H++ +Y MG
Sbjct: 460 ADVDKSGTIDYIEFVTATMHRHRLEKEENLIEAFKYFDKDRSGFITRDELKHSMTEYGMG 519
Query: 478 DAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGNPD 512
D TI E+I +VD DNDGRINYEEF AMMRKG D
Sbjct: 520 DDATIDEVINDVDTDNDGRINYEEFVAMMRKGTTD 554
|
|
| TAIR|locus:2036783 CPK19 "calcium-dependent protein kinase 19" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1623 (576.4 bits), Expect = 7.6e-167, P = 7.6e-167
Identities = 305/451 (67%), Positives = 372/451 (82%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
LG+P ED++ Y GRELGRGQFG+TY+ T + + FACKSI RKLI D EDVRRE
Sbjct: 87 LGRPFEDIKEKYSLGRELGRGQFGITYICTEISSGKNFACKSILKRKLIRTKDREDVRRE 146
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQM 177
+QIMH+L+G NIVE+KGAYEDR SV+L+M+LC GGELFD+I +GHYSE+AAA + R +
Sbjct: 147 IQIMHYLSGQPNIVEIKGAYEDRQSVHLVMELCEGGELFDKITKRGHYSEKAAAEIIRSV 206
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAE-DSPLKATDFGLSVFFKPGDVFKDLVGSAYY 236
V VV CH MGV+HRDLKPENFL SS E S LKATDFG+SVF + G V++D+VGSAYY
Sbjct: 207 VKVVQICHFMGVIHRDLKPENFLLSSKDEASSMLKATDFGVSVFIEEGKVYEDIVGSAYY 266
Query: 237 VAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296
VAPEVL+RNYG DIWSAGVILYILL G PPFW ET++ IF+ ILRG IDF S+PWP+I
Sbjct: 267 VAPEVLKRNYGKAIDIWSAGVILYILLCGNPPFWAETDKGIFEEILRGEIDFESEPWPSI 326
Query: 297 SSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLK 356
S SAKD+V+ ML DPK+R +AA+VL HPW+R G+ASDKP+D AVL+RMKQ RAMNKLK
Sbjct: 327 SESAKDLVRNMLKYDPKKRFTAAQVLEHPWIREGGEASDKPIDSAVLSRMKQLRAMNKLK 386
Query: 357 KVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLME 416
K+A K IA+NL EEE+ GLK MF +MDTD SGTIT++ELK+GL KLG+RL+E+EV+QL+E
Sbjct: 387 KLAFKFIAQNLKEEELKGLKTMFANMDTDKSGTITYDELKSGLEKLGSRLTETEVKQLLE 446
Query: 417 AADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNM 476
ADVDGNGTIDYIEFI+ATM+ RVERE++L+KAF++FDKDNSG+I+ +ELE A+K+YNM
Sbjct: 447 DADVDGNGTIDYIEFISATMNRFRVEREDNLFKAFQHFDKDNSGFISRQELETAMKEYNM 506
Query: 477 GDAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507
GD IKEII+EVD DNDG INY+EF MM+
Sbjct: 507 GDDIMIKEIISEVDADNDGSINYQEFCNMMK 537
|
|
| TAIR|locus:2827528 CPK6 "calcium dependent protein kinase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1596 (566.9 bits), Expect = 5.5e-164, P = 5.5e-164
Identities = 303/463 (65%), Positives = 374/463 (80%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
LG ++R+ Y R+LG+GQFG TYL T T +ACKSIS RKLI+++DVEDVRRE
Sbjct: 74 LGHKTPNIRDLYTLSRKLGQGQFGTTYLCTDIATGVDYACKSISKRKLISKEDVEDVRRE 133
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQM 177
+QIMHHL GH+NIV +KGAYED V+++M+LCAGGELFDRII +GHYSER AA L + +
Sbjct: 134 IQIMHHLAGHKNIVTIKGAYEDPLYVHIVMELCAGGELFDRIIHRGHYSERKAAELTKII 193
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV 237
V VV CHS+GVMHRDLKPENFL + +D LKA DFGLSVFFKPG +FKD+VGS YYV
Sbjct: 194 VGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFKDVVGSPYYV 253
Query: 238 APEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
APEVL ++YG EAD+W+AGVILYILLSGVPPFW ET+Q IFDA+L+G+IDF +DPWP IS
Sbjct: 254 APEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGYIDFDTDPWPVIS 313
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKK 357
SAKD+++KML + P ERL+A EVL HPW+ +G A D+ LD AVL+R+KQF AMNKLKK
Sbjct: 314 DSAKDLIRKMLCSSPSERLTAHEVLRHPWICENGVAPDRALDPAVLSRLKQFSAMNKLKK 373
Query: 358 VALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEA 417
+ALKVIAE+LSEEEI GL+ MF++MDTDNSG ITF+ELKAGL + G+ L ++E+R LMEA
Sbjct: 374 MALKVIAESLSEEEIAGLRAMFEAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMEA 433
Query: 418 ADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG 477
ADVD +GTIDY EFI AT+H+N++EREEHL AF+YFDKD SGYIT++EL+ + ++ M
Sbjct: 434 ADVDNSGTIDYSEFIAATIHLNKLEREEHLVSAFQYFDKDGSGYITIDELQQSCIEHGMT 493
Query: 478 DAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGNPDMVGNRRRK 520
D +++II EVD DNDGRI+YEEF AMM+KGN VG R K
Sbjct: 494 DV-FLEDIIKEVDQDNDGRIDYEEFVAMMQKGNAG-VGRRTMK 534
|
|
| TAIR|locus:2175503 CPK1 "calcium dependent protein kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1595 (566.5 bits), Expect = 7.1e-164, P = 7.1e-164
Identities = 298/453 (65%), Positives = 367/453 (81%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L + E+ + Y GR+LG+GQFG T+L K T ++FACKSI+ RKL+ +DVEDVRRE
Sbjct: 139 LQRKTENFKEFYSLGRKLGQGQFGTTFLCVEKTTGKEFACKSIAKRKLLTDEDVEDVRRE 198
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQM 177
+QIMHHL GH N++ +KGAYED +V+L+M+ CAGGELFDRII +GHY+ER AA L R +
Sbjct: 199 IQIMHHLAGHPNVISIKGAYEDVVAVHLVMECCAGGELFDRIIQRGHYTERKAAELTRTI 258
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV 237
V VV CHS+GVMHRDLKPENFLF S EDS LK DFGLS+FFKP DVF D+VGS YYV
Sbjct: 259 VGVVEACHSLGVMHRDLKPENFLFVSKHEDSLLKTIDFGLSMFFKPDDVFTDVVGSPYYV 318
Query: 238 APEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
APEVLR+ YG EAD+WSAGVI+YILLSGVPPFW ETEQ IF+ +L G +DFSSDPWP+IS
Sbjct: 319 APEVLRKRYGPEADVWSAGVIVYILLSGVPPFWAETEQGIFEQVLHGDLDFSSDPWPSIS 378
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKK 357
SAKD+V+KML DPK+RL+A +VL HPW++VDG A DKPLD AVL+RMKQF AMNK KK
Sbjct: 379 ESAKDLVRKMLVRDPKKRLTAHQVLCHPWVQVDGVAPDKPLDSAVLSRMKQFSAMNKFKK 438
Query: 358 VALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEA 417
+AL+VIAE+LSEEEI GLKEMF +D D SG ITFEELKAGL ++G L ESE+ LM+A
Sbjct: 439 MALRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQA 498
Query: 418 ADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG 477
ADVD +GTIDY EFI AT+H+N++ERE+HL+ AF YFDKD SGYIT +EL+ A +++ +
Sbjct: 499 ADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFGVE 558
Query: 478 DAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGN 510
D + I+E++ +VD DNDGRI+Y EF AMM+KG+
Sbjct: 559 DVR-IEELMRDVDQDNDGRIDYNEFVAMMQKGS 590
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| A5A7I8 | CDPK5_SOLTU | 2, ., 7, ., 1, 1, ., 1 | 0.6094 | 0.9615 | 0.9345 | N/A | no |
| A5A7I7 | CDPK4_SOLTU | 2, ., 7, ., 1, 1, ., 1 | 0.6422 | 0.9134 | 0.8527 | N/A | no |
| P49101 | CDPK2_MAIZE | 2, ., 7, ., 1, 1, ., 1 | 0.6776 | 0.9134 | 0.9259 | N/A | no |
| Q42479 | CDPK3_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.8086 | 0.8942 | 0.8790 | yes | no |
| P28582 | CDPK_DAUCA | 2, ., 7, ., 1, 1, ., 1 | 0.6979 | 0.8557 | 0.8364 | N/A | no |
| Q3E9C0 | CDPKY_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.7216 | 0.9230 | 0.9177 | no | no |
| Q9C6P3 | CDPKX_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.7004 | 0.9115 | 0.9097 | no | no |
| Q9FMP5 | CDPKH_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.7237 | 0.9211 | 0.9071 | no | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.7.11.1 | 0.979 |
| 3rd Layer | 2.7.11 | 0.983 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 520 | |||
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 1e-103 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 1e-93 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 1e-70 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 7e-64 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 1e-63 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 5e-62 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 3e-60 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 1e-56 | |
| cd05572 | 262 | cd05572, STKc_cGK_PKG, Catalytic domain of the Pro | 8e-54 | |
| cd05580 | 290 | cd05580, STKc_PKA, Catalytic domain of the Protein | 3e-53 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 1e-51 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 2e-50 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 7e-49 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 9e-46 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 4e-45 | |
| cd05573 | 350 | cd05573, STKc_ROCK_NDR_like, Catalytic domain of R | 4e-45 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 1e-44 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 2e-43 | |
| cd05612 | 291 | cd05612, STKc_PRKX_like, Catalytic domain of PRKX- | 2e-43 | |
| cd07832 | 286 | cd07832, STKc_CCRK, Catalytic domain of the Serine | 4e-43 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 3e-42 | |
| cd05600 | 333 | cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun | 2e-41 | |
| cd05609 | 305 | cd05609, STKc_MAST, Catalytic domain of the Protei | 4e-41 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 2e-40 | |
| cd07841 | 298 | cd07841, STKc_CDK7, Catalytic domain of the Serine | 5e-40 | |
| PTZ00263 | 329 | PTZ00263, PTZ00263, protein kinase A catalytic sub | 5e-39 | |
| cd05574 | 316 | cd05574, STKc_phototropin_like, Catalytic domain o | 4e-38 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 4e-37 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 8e-37 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 1e-36 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 2e-36 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 3e-36 | |
| cd07830 | 283 | cd07830, STKc_MAK_like, Catalytic domain of Male g | 4e-36 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 5e-36 | |
| cd05571 | 323 | cd05571, STKc_PKB, Catalytic domain of the Protein | 2e-35 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 2e-35 | |
| cd06917 | 277 | cd06917, STKc_NAK1_like, Catalytic domain of Funga | 4e-35 | |
| cd05584 | 323 | cd05584, STKc_p70S6K, Catalytic domain of the Prot | 8e-35 | |
| cd05596 | 370 | cd05596, STKc_ROCK, Catalytic domain of the Protei | 1e-34 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 6e-34 | |
| cd06611 | 280 | cd06611, STKc_SLK_like, Catalytic domain of Ste20- | 8e-34 | |
| cd07834 | 330 | cd07834, STKc_MAPK, Catalytic domain of the Serine | 1e-33 | |
| cd05586 | 330 | cd05586, STKc_Sck1_like, Catalytic domain of Suppr | 1e-33 | |
| cd05570 | 318 | cd05570, STKc_PKC, Catalytic domain of the Protein | 1e-33 | |
| cd07838 | 287 | cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc | 2e-33 | |
| cd06609 | 274 | cd06609, STKc_MST3_like, Catalytic domain of Mamma | 3e-33 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 3e-33 | |
| cd05595 | 323 | cd05595, STKc_PKB_beta, Catalytic domain of the Pr | 5e-33 | |
| cd05575 | 323 | cd05575, STKc_SGK, Catalytic domain of the Protein | 9e-33 | |
| cd06659 | 297 | cd06659, STKc_PAK6, Catalytic domain of the Protei | 2e-32 | |
| cd05614 | 332 | cd05614, STKc_MSK2_N, N-terminal catalytic domain | 3e-32 | |
| cd06658 | 292 | cd06658, STKc_PAK5, Catalytic domain of the Protei | 4e-32 | |
| cd05598 | 376 | cd05598, STKc_LATS, Catalytic domain of the Protei | 6e-32 | |
| cd06613 | 262 | cd06613, STKc_MAP4K3_like, Catalytic domain of Mit | 7e-32 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 1e-31 | |
| PTZ00184 | 149 | PTZ00184, PTZ00184, calmodulin; Provisional | 1e-31 | |
| cd05599 | 364 | cd05599, STKc_NDR_like, Catalytic domain of Nuclea | 3e-31 | |
| cd05613 | 290 | cd05613, STKc_MSK1_N, N-terminal catalytic domain | 3e-31 | |
| cd05589 | 324 | cd05589, STKc_PKN, Catalytic domain of the Protein | 5e-31 | |
| cd06625 | 263 | cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ | 8e-31 | |
| cd05585 | 312 | cd05585, STKc_YPK1_like, Catalytic domain of Yeast | 9e-31 | |
| cd07831 | 282 | cd07831, STKc_MOK, Catalytic domain of the Serine/ | 1e-30 | |
| PTZ00426 | 340 | PTZ00426, PTZ00426, cAMP-dependent protein kinase | 2e-30 | |
| cd08219 | 255 | cd08219, STKc_Nek3, Catalytic domain of the Protei | 4e-30 | |
| cd05594 | 325 | cd05594, STKc_PKB_alpha, Catalytic domain of the P | 4e-30 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 5e-30 | |
| cd08218 | 256 | cd08218, STKc_Nek1, Catalytic domain of the Protei | 6e-30 | |
| cd05632 | 285 | cd05632, STKc_GRK5, Catalytic domain of the Protei | 7e-30 | |
| cd05602 | 325 | cd05602, STKc_SGK1, Catalytic domain of the Protei | 8e-30 | |
| cd05593 | 328 | cd05593, STKc_PKB_gamma, Catalytic domain of the P | 9e-30 | |
| cd05604 | 325 | cd05604, STKc_SGK3, Catalytic domain of the Protei | 1e-29 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 1e-29 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 2e-29 | |
| cd05601 | 330 | cd05601, STKc_CRIK, Catalytic domain of the Protei | 2e-29 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 3e-29 | |
| cd05592 | 316 | cd05592, STKc_nPKC_theta_delta, Catalytic domain o | 4e-29 | |
| cd05587 | 324 | cd05587, STKc_cPKC, Catalytic domain of the Protei | 6e-29 | |
| cd07856 | 328 | cd07856, STKc_Sty1_Hog1, Catalytic domain of the S | 6e-29 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 9e-29 | |
| cd05603 | 321 | cd05603, STKc_SGK2, Catalytic domain of the Protei | 1e-28 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 1e-28 | |
| cd06607 | 307 | cd06607, STKc_TAO, Catalytic domain of the Protein | 2e-28 | |
| cd05590 | 320 | cd05590, STKc_nPKC_eta, Catalytic domain of the Pr | 3e-28 | |
| cd07857 | 332 | cd07857, STKc_MPK1, Catalytic domain of the Serine | 3e-28 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 3e-28 | |
| cd08222 | 260 | cd08222, STKc_Nek11, Catalytic domain of the Prote | 5e-28 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 5e-28 | |
| cd05618 | 329 | cd05618, STKc_aPKC_iota, Catalytic domain of the P | 5e-28 | |
| cd06644 | 292 | cd06644, STKc_STK10_LOK, Catalytic domain of the P | 7e-28 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 9e-28 | |
| cd08528 | 269 | cd08528, STKc_Nek10, Catalytic domain of the Prote | 9e-28 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 1e-27 | |
| cd06608 | 275 | cd06608, STKc_myosinIII_like, Catalytic domain of | 2e-27 | |
| cd08224 | 267 | cd08224, STKc_Nek6_Nek7, Catalytic domain of the P | 2e-27 | |
| cd05591 | 321 | cd05591, STKc_nPKC_epsilon, Catalytic domain of th | 2e-27 | |
| cd05625 | 382 | cd05625, STKc_LATS1, Catalytic domain of the Prote | 3e-27 | |
| COG5126 | 160 | COG5126, FRQ1, Ca2+-binding protein (EF-Hand super | 3e-27 | |
| cd08220 | 256 | cd08220, STKc_Nek8, Catalytic domain of the Protei | 3e-27 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 4e-27 | |
| cd07847 | 286 | cd07847, STKc_CDKL1_4, Catalytic domain of the Ser | 4e-27 | |
| cd06651 | 266 | cd06651, STKc_MEKK3, Catalytic domain of the Prote | 4e-27 | |
| cd06652 | 265 | cd06652, STKc_MEKK2, Catalytic domain of the Prote | 5e-27 | |
| cd05627 | 360 | cd05627, STKc_NDR2, Catalytic domain of the Protei | 5e-27 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 6e-27 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 6e-27 | |
| cd05626 | 381 | cd05626, STKc_LATS2, Catalytic domain of the Prote | 1e-26 | |
| cd06621 | 287 | cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of | 1e-26 | |
| cd05630 | 285 | cd05630, STKc_GRK6, Catalytic domain of the Protei | 1e-26 | |
| cd05622 | 371 | cd05622, STKc_ROCK1, Catalytic domain of the Prote | 1e-26 | |
| cd06633 | 313 | cd06633, STKc_TAO3, Catalytic domain of the Protei | 1e-26 | |
| cd07843 | 293 | cd07843, STKc_CDC2L1, Catalytic domain of the Seri | 2e-26 | |
| PLN00034 | 353 | PLN00034, PLN00034, mitogen-activated protein kina | 3e-26 | |
| cd06643 | 282 | cd06643, STKc_SLK, Catalytic domain of the Protein | 3e-26 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 4e-26 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 4e-26 | |
| cd05619 | 316 | cd05619, STKc_nPKC_theta, Catalytic domain of the | 5e-26 | |
| cd05621 | 370 | cd05621, STKc_ROCK2, Catalytic domain of the Prote | 6e-26 | |
| cd05605 | 285 | cd05605, STKc_GRK4_like, Catalytic domain of G pro | 7e-26 | |
| cd07858 | 337 | cd07858, STKc_TEY_MAPK_plant, Catalytic domain of | 9e-26 | |
| cd06622 | 286 | cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of | 1e-25 | |
| cd05597 | 331 | cd05597, STKc_DMPK_like, Catalytic domain of Myoto | 1e-25 | |
| cd05628 | 363 | cd05628, STKc_NDR1, Catalytic domain of the Protei | 1e-25 | |
| cd07861 | 285 | cd07861, STKc_CDK1_euk, Catalytic domain of the Se | 1e-25 | |
| cd05588 | 329 | cd05588, STKc_aPKC, Catalytic domain of the Protei | 2e-25 | |
| cd05616 | 323 | cd05616, STKc_cPKC_beta, Catalytic domain of the P | 2e-25 | |
| PTZ00024 | 335 | PTZ00024, PTZ00024, cyclin-dependent protein kinas | 2e-25 | |
| cd07836 | 284 | cd07836, STKc_Pho85, Catalytic domain of the Serin | 3e-25 | |
| cd07851 | 343 | cd07851, STKc_p38, Catalytic domain of the Serine/ | 4e-25 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 4e-25 | |
| cd05615 | 323 | cd05615, STKc_cPKC_alpha, Catalytic domain of the | 6e-25 | |
| PTZ00266 | 1021 | PTZ00266, PTZ00266, NIMA-related protein kinase; P | 9e-25 | |
| cd08228 | 267 | cd08228, STKc_Nek6, Catalytic domain of the Protei | 1e-24 | |
| cd06653 | 264 | cd06653, STKc_MEKK3_like_1, Catalytic domain of MA | 1e-24 | |
| cd05617 | 327 | cd05617, STKc_aPKC_zeta, Catalytic domain of the P | 1e-24 | |
| cd07845 | 309 | cd07845, STKc_CDK10, Catalytic domain of the Serin | 1e-24 | |
| cd08225 | 257 | cd08225, STKc_Nek5, Catalytic domain of the Protei | 1e-24 | |
| cd05629 | 377 | cd05629, STKc_NDR_like_fungal, Catalytic domain of | 1e-24 | |
| PTZ00283 | 496 | PTZ00283, PTZ00283, serine/threonine protein kinas | 2e-24 | |
| cd05620 | 316 | cd05620, STKc_nPKC_delta, Catalytic domain of the | 2e-24 | |
| PTZ00183 | 158 | PTZ00183, PTZ00183, centrin; Provisional | 2e-24 | |
| cd05631 | 285 | cd05631, STKc_GRK4, Catalytic domain of the Protei | 2e-24 | |
| cd07864 | 302 | cd07864, STKc_CDK12, Catalytic domain of the Serin | 4e-24 | |
| cd07849 | 336 | cd07849, STKc_ERK1_2_like, Catalytic domain of Ext | 4e-24 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 4e-24 | |
| cd08223 | 257 | cd08223, STKc_Nek4, Catalytic domain of the Protei | 6e-24 | |
| cd07835 | 283 | cd07835, STKc_CDK1_like, Catalytic domain of Cycli | 8e-24 | |
| cd07848 | 287 | cd07848, STKc_CDKL5, Catalytic domain of the Serin | 8e-24 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 1e-23 | |
| cd07865 | 310 | cd07865, STKc_CDK9, Catalytic domain of the Serine | 1e-23 | |
| cd07837 | 295 | cd07837, STKc_CdkB_plant, Catalytic domain of the | 2e-23 | |
| cd07860 | 284 | cd07860, STKc_CDK2_3, Catalytic domain of the Seri | 2e-23 | |
| cd06631 | 265 | cd06631, STKc_YSK4, Catalytic domain of the Protei | 2e-23 | |
| cd07854 | 342 | cd07854, STKc_MAPK4_6, Catalytic domain of the Ser | 3e-23 | |
| cd06635 | 317 | cd06635, STKc_TAO1, Catalytic domain of the Protei | 4e-23 | |
| PHA03390 | 267 | PHA03390, pk1, serine/threonine-protein kinase 1; | 1e-22 | |
| cd05607 | 277 | cd05607, STKc_GRK7, Catalytic domain of the Protei | 2e-22 | |
| PLN00009 | 294 | PLN00009, PLN00009, cyclin-dependent kinase A; Pro | 2e-22 | |
| cd07839 | 284 | cd07839, STKc_CDK5, Catalytic domain of the Serine | 2e-22 | |
| cd07852 | 337 | cd07852, STKc_MAPK15, Catalytic domain of the Seri | 3e-22 | |
| cd06645 | 267 | cd06645, STKc_MAP4K3, Catalytic domain of the Prot | 3e-22 | |
| cd06634 | 308 | cd06634, STKc_TAO2, Catalytic domain of the Protei | 5e-22 | |
| cd08229 | 267 | cd08229, STKc_Nek7, Catalytic domain of the Protei | 6e-22 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 8e-22 | |
| cd05624 | 331 | cd05624, STKc_MRCK_beta, Catalytic domain of the P | 1e-21 | |
| cd07842 | 316 | cd07842, STKc_CDK8_like, Catalytic domain of Cycli | 2e-21 | |
| cd05623 | 332 | cd05623, STKc_MRCK_alpha, Catalytic domain of the | 2e-21 | |
| PTZ00267 | 478 | PTZ00267, PTZ00267, NIMA-related protein kinase; P | 4e-21 | |
| cd06620 | 284 | cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of | 5e-21 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 6e-21 | |
| cd07879 | 342 | cd07879, STKc_p38delta_MAPK13, Catalytic domain of | 1e-20 | |
| cd06646 | 267 | cd06646, STKc_MAP4K5, Catalytic domain of the Prot | 2e-20 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 2e-20 | |
| cd07863 | 288 | cd07863, STKc_CDK4, Catalytic domain of the Serine | 2e-20 | |
| cd07866 | 311 | cd07866, STKc_BUR1, Catalytic domain of the Serine | 2e-20 | |
| cd06640 | 277 | cd06640, STKc_MST4, Catalytic domain of the Protei | 3e-20 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 5e-20 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 7e-20 | |
| cd06637 | 272 | cd06637, STKc_TNIK, Catalytic domain of the Protei | 8e-20 | |
| cd07850 | 353 | cd07850, STKc_JNK, Catalytic domain of the Serine/ | 3e-19 | |
| cd07878 | 343 | cd07878, STKc_p38beta_MAPK11, Catalytic domain of | 3e-19 | |
| cd07844 | 291 | cd07844, STKc_PCTAIRE_like, Catalytic domain of PC | 3e-19 | |
| cd07859 | 338 | cd07859, STKc_TDY_MAPK_plant, Catalytic domain of | 4e-19 | |
| cd07855 | 334 | cd07855, STKc_ERK5, Catalytic domain of the Serine | 5e-19 | |
| cd06636 | 282 | cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr | 2e-18 | |
| cd05606 | 278 | cd05606, STKc_beta_ARK, Catalytic domain of the Pr | 2e-18 | |
| cd07876 | 359 | cd07876, STKc_JNK2, Catalytic domain of the Serine | 2e-18 | |
| cd07873 | 301 | cd07873, STKc_PCTAIRE1, Catalytic domain of the Se | 4e-18 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 8e-18 | |
| cd06618 | 296 | cd06618, PKc_MKK7, Catalytic domain of the dual-sp | 8e-18 | |
| cd00051 | 63 | cd00051, EFh, EF-hand, calcium binding motif; A di | 9e-18 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 2e-17 | |
| cd07875 | 364 | cd07875, STKc_JNK1, Catalytic domain of the Serine | 2e-17 | |
| cd07872 | 309 | cd07872, STKc_PCTAIRE2, Catalytic domain of the Se | 3e-17 | |
| cd07880 | 343 | cd07880, STKc_p38gamma_MAPK12, Catalytic domain of | 3e-17 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 4e-17 | |
| cd07871 | 288 | cd07871, STKc_PCTAIRE3, Catalytic domain of the Se | 4e-17 | |
| cd06638 | 286 | cd06638, STKc_myosinIIIA, Catalytic domain of the | 5e-17 | |
| cd07874 | 355 | cd07874, STKc_JNK3, Catalytic domain of the Serine | 5e-17 | |
| cd07877 | 345 | cd07877, STKc_p38alpha_MAPK14, Catalytic domain of | 2e-16 | |
| cd07870 | 291 | cd07870, STKc_PFTAIRE2, Catalytic domain of the Se | 2e-16 | |
| cd05056 | 270 | cd05056, PTKc_FAK, Catalytic domain of the Protein | 3e-16 | |
| cd00051 | 63 | cd00051, EFh, EF-hand, calcium binding motif; A di | 5e-16 | |
| cd07853 | 372 | cd07853, STKc_NLK, Catalytic domain of the Serine/ | 5e-16 | |
| cd06639 | 291 | cd06639, STKc_myosinIIIB, Catalytic domain of the | 6e-16 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 8e-16 | |
| cd06615 | 308 | cd06615, PKc_MEK, Catalytic domain of the dual-spe | 8e-16 | |
| cd05633 | 279 | cd05633, STKc_GRK3, Catalytic domain of the Protei | 1e-15 | |
| PTZ00036 | 440 | PTZ00036, PTZ00036, glycogen synthase kinase; Prov | 1e-15 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 1e-15 | |
| cd08216 | 314 | cd08216, PK_STRAD, Pseudokinase domain of STE20-re | 2e-15 | |
| TIGR03903 | 1266 | TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas | 4e-15 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 7e-15 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 9e-15 | |
| PRK13184 | 932 | PRK13184, pknD, serine/threonine-protein kinase; R | 1e-14 | |
| cd05055 | 302 | cd05055, PTKc_PDGFR, Catalytic domain of the Prote | 1e-14 | |
| cd05610 | 669 | cd05610, STKc_MASTL, Catalytic domain of the Prote | 2e-14 | |
| cd06619 | 279 | cd06619, PKc_MKK5, Catalytic domain of the dual-sp | 2e-14 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 4e-14 | |
| cd07862 | 290 | cd07862, STKc_CDK6, Catalytic domain of the Serine | 9e-14 | |
| cd06650 | 333 | cd06650, PKc_MEK1, Catalytic domain of the dual-sp | 1e-13 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 1e-13 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 2e-13 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 2e-13 | |
| cd07869 | 303 | cd07869, STKc_PFTAIRE1, Catalytic domain of the Se | 2e-13 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 2e-13 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 2e-13 | |
| cd06617 | 283 | cd06617, PKc_MKK3_6, Catalytic domain of the dual- | 3e-13 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 5e-13 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 6e-13 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 7e-13 | |
| cd05610 | 669 | cd05610, STKc_MASTL, Catalytic domain of the Prote | 1e-12 | |
| cd07867 | 317 | cd07867, STKc_CDC2L6, Catalytic domain of Serine/T | 1e-12 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 1e-12 | |
| cd07868 | 317 | cd07868, STKc_CDK8, Catalytic domain of the Serine | 2e-12 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 2e-12 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 2e-12 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 3e-12 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 3e-12 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 4e-12 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 4e-12 | |
| cd06649 | 331 | cd06649, PKc_MEK2, Catalytic domain of the dual-sp | 5e-12 | |
| pfam13499 | 60 | pfam13499, EF_hand_5, EF-hand domain pair | 5e-12 | |
| PHA03209 | 357 | PHA03209, PHA03209, serine/threonine kinase US3; P | 5e-12 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 5e-12 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 8e-12 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 3e-11 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 4e-11 | |
| cd05576 | 237 | cd05576, STKc_RPK118_like, Catalytic domain of the | 5e-11 | |
| cd05088 | 303 | cd05088, PTKc_Tie2, Catalytic domain of the Protei | 1e-10 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 2e-10 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 2e-10 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 2e-10 | |
| cd06616 | 288 | cd06616, PKc_MKK4, Catalytic domain of the dual-sp | 3e-10 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 3e-10 | |
| cd05089 | 297 | cd05089, PTKc_Tie1, Catalytic domain of the Protei | 3e-10 | |
| COG5126 | 160 | COG5126, FRQ1, Ca2+-binding protein (EF-Hand super | 5e-10 | |
| cd05074 | 273 | cd05074, PTKc_Tyro3, Catalytic domain of the Prote | 5e-10 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 5e-10 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 5e-10 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 9e-10 | |
| PHA03207 | 392 | PHA03207, PHA03207, serine/threonine kinase US3; P | 1e-09 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 1e-09 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 2e-09 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 3e-09 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 3e-09 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 3e-09 | |
| pfam13499 | 60 | pfam13499, EF_hand_5, EF-hand domain pair | 4e-09 | |
| cd05047 | 270 | cd05047, PTKc_Tie, Catalytic domain of Tie Protein | 5e-09 | |
| pfam13833 | 53 | pfam13833, EF_hand_6, EF-hand domain pair | 7e-09 | |
| cd05115 | 257 | cd05115, PTKc_Zap-70, Catalytic domain of the Prot | 8e-09 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 1e-08 | |
| cd05091 | 283 | cd05091, PTKc_Ror2, Catalytic domain of the Protei | 1e-08 | |
| cd05111 | 279 | cd05111, PTK_HER3, Pseudokinase domain of the Prot | 2e-08 | |
| cd05062 | 277 | cd05062, PTKc_IGF-1R, Catalytic domain of the Prot | 2e-08 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 5e-08 | |
| pfam13833 | 53 | pfam13833, EF_hand_6, EF-hand domain pair | 8e-08 | |
| PHA03211 | 461 | PHA03211, PHA03211, serine/threonine kinase US3; P | 9e-08 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 1e-07 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 2e-07 | |
| cd05103 | 343 | cd05103, PTKc_VEGFR2, Catalytic domain of the Prot | 2e-07 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 2e-07 | |
| pfam13499 | 60 | pfam13499, EF_hand_5, EF-hand domain pair | 3e-07 | |
| PHA03212 | 391 | PHA03212, PHA03212, serine/threonine kinase US3; P | 3e-07 | |
| PTZ00284 | 467 | PTZ00284, PTZ00284, protein kinase; Provisional | 3e-07 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 3e-07 | |
| cd05116 | 257 | cd05116, PTKc_Syk, Catalytic domain of the Protein | 4e-07 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 4e-07 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 4e-07 | |
| cd00051 | 63 | cd00051, EFh, EF-hand, calcium binding motif; A di | 6e-07 | |
| smart00027 | 96 | smart00027, EH, Eps15 homology domain | 6e-07 | |
| cd00052 | 67 | cd00052, EH, Eps15 homology domain; found in prote | 7e-07 | |
| cd05061 | 288 | cd05061, PTKc_InsR, Catalytic domain of the Protei | 7e-07 | |
| PHA03210 | 501 | PHA03210, PHA03210, serine/threonine kinase US3; P | 1e-06 | |
| cd05097 | 295 | cd05097, PTKc_DDR_like, Catalytic domain of Discoi | 1e-06 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 2e-06 | |
| cd05096 | 304 | cd05096, PTKc_DDR1, Catalytic domain of the Protei | 2e-06 | |
| cd05109 | 279 | cd05109, PTKc_HER2, Catalytic domain of the Protei | 2e-06 | |
| cd05102 | 338 | cd05102, PTKc_VEGFR3, Catalytic domain of the Prot | 2e-06 | |
| PTZ00183 | 158 | PTZ00183, PTZ00183, centrin; Provisional | 3e-06 | |
| smart00750 | 176 | smart00750, KIND, kinase non-catalytic C-lobe doma | 3e-06 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 4e-06 | |
| smart00054 | 29 | smart00054, EFh, EF-hand, calcium binding motif | 4e-06 | |
| pfam00036 | 29 | pfam00036, efhand, EF hand | 5e-06 | |
| smart00054 | 29 | smart00054, EFh, EF-hand, calcium binding motif | 6e-06 | |
| cd05051 | 296 | cd05051, PTKc_DDR, Catalytic domain of the Protein | 6e-06 | |
| cd05106 | 374 | cd05106, PTKc_CSF-1R, Catalytic domain of the Prot | 8e-06 | |
| cd05058 | 262 | cd05058, PTKc_Met_Ron, Catalytic domain of the Pro | 9e-06 | |
| pfam00036 | 29 | pfam00036, efhand, EF hand | 1e-05 | |
| pfam13405 | 30 | pfam13405, EF_hand_4, EF-hand domain | 1e-05 | |
| PTZ00184 | 149 | PTZ00184, PTZ00184, calmodulin; Provisional | 3e-05 | |
| cd05107 | 401 | cd05107, PTKc_PDGFR_beta, Catalytic domain of the | 3e-05 | |
| cd00052 | 67 | cd00052, EH, Eps15 homology domain; found in prote | 4e-05 | |
| PLN03224 | 507 | PLN03224, PLN03224, probable serine/threonine prot | 4e-05 | |
| smart00027 | 96 | smart00027, EH, Eps15 homology domain | 5e-05 | |
| pfam13405 | 30 | pfam13405, EF_hand_4, EF-hand domain | 5e-05 | |
| cd05095 | 296 | cd05095, PTKc_DDR2, Catalytic domain of the Protei | 7e-05 | |
| cd05108 | 316 | cd05108, PTKc_EGFR, Catalytic domain of the Protei | 9e-05 | |
| cd05054 | 337 | cd05054, PTKc_VEGFR, Catalytic domain of the Prote | 2e-04 | |
| cd05110 | 303 | cd05110, PTKc_HER4, Catalytic domain of the Protei | 2e-04 | |
| pfam00036 | 29 | pfam00036, efhand, EF hand | 3e-04 | |
| pfam13202 | 25 | pfam13202, EF_hand_3, EF hand | 4e-04 | |
| pfam13833 | 53 | pfam13833, EF_hand_6, EF-hand domain pair | 5e-04 | |
| cd05120 | 155 | cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot | 8e-04 | |
| cd08227 | 327 | cd08227, PK_STRAD_alpha, Pseudokinase domain of ST | 8e-04 | |
| cd05043 | 280 | cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece | 0.001 | |
| smart00054 | 29 | smart00054, EFh, EF-hand, calcium binding motif | 0.002 | |
| pfam00036 | 29 | pfam00036, efhand, EF hand | 0.002 | |
| cd08226 | 328 | cd08226, PK_STRAD_beta, Pseudokinase domain of STE | 0.002 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 0.002 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 309 bits (793), Expect = e-103
Identities = 109/261 (41%), Positives = 150/261 (57%), Gaps = 9/261 (3%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y +LG G FG YL K T + A K I +K+ + D E + RE++I+ L H
Sbjct: 1 YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKI--KKDRERILREIKILKKL-KHP 57
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
NIV L +ED + L+M+ C GG+LFD + +G SE A RQ+++ + Y HS G
Sbjct: 58 NIVRLYDVFEDEDKLYLVMEYCEGGDLFDLLKKRGRLSEDEARFYLRQILSALEYLHSKG 117
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRN-YG 247
++HRDLKPEN L ED +K DFGL+ PG+ VG+ Y+APEVL YG
Sbjct: 118 IVHRDLKPENILLD---EDGHVKLADFGLARQLDPGEKLTTFVGTPEYMAPEVLLGKGYG 174
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQS-IFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
DIWS GVILY LL+G PPF G+ + +F I + F W +IS AKD+++K
Sbjct: 175 KAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEW-DISPEAKDLIRK 233
Query: 307 MLHADPKERLSAAEVLNHPWM 327
+L DP++RL+A E L HP+
Sbjct: 234 LLVKDPEKRLTAEEALQHPFF 254
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 285 bits (732), Expect = 1e-93
Identities = 106/265 (40%), Positives = 146/265 (55%), Gaps = 11/265 (4%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y R+LG G FG Y HK T + A K + R + RRE++I+ L H
Sbjct: 1 YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRS-EKSKKDQTARREIRILRRL-SHP 58
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
NIV L A+ED+ + L+M+ C GG+LFD + G SE A + Q++ + Y HS G
Sbjct: 59 NIVRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRGGPLSEDEAKKIALQILRGLEYLHSNG 118
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF-KPGDVFKDLVGSAYYVAPEVLR--RN 245
++HRDLKPEN L E+ +K DFGL+ K VG+ +Y+APEVL
Sbjct: 119 IIHRDLKPENILLD---ENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNG 175
Query: 246 YGAEADIWSAGVILYILLSGVPPFWGE---TEQSIFDAILRGHIDFSSDPWPNISSSAKD 302
YG + D+WS GVILY LL+G PPF GE + + IL ++F W + S AKD
Sbjct: 176 YGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSSGSEEAKD 235
Query: 303 IVKKMLHADPKERLSAAEVLNHPWM 327
++KK L+ DP +R +A E+L HPW
Sbjct: 236 LIKKCLNKDPSKRPTAEEILQHPWF 260
|
Length = 260 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 225 bits (576), Expect = 1e-70
Identities = 93/258 (36%), Positives = 140/258 (54%), Gaps = 13/258 (5%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG LV KDT + +A K + +K+I R +VE E I+ + H IV+L
Sbjct: 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRIN-HPFIVKLH 59
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
A++ + L+++ GGELF + +G +SE A ++V + Y HS+G+++RDL
Sbjct: 60 YAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDL 119
Query: 195 KPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADI 252
KPEN L D +K TDFGL+ G G+ Y+APEVL YG D
Sbjct: 120 KPENILLD---ADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDW 176
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
WS GV+LY +L+G PPF+ E + I++ IL+ + F +S A+D++ +L DP
Sbjct: 177 WSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFPE----FLSPEARDLISGLLQKDP 232
Query: 313 KERL---SAAEVLNHPWM 327
+RL A E+ HP+
Sbjct: 233 TKRLGSGGAEEIKAHPFF 250
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 208 bits (531), Expect = 7e-64
Identities = 83/261 (31%), Positives = 138/261 (52%), Gaps = 18/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+++G+G FG YLV K + + K I + + + ED EV+I+ L H NI++
Sbjct: 6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM-SEKEREDALNEVKILKKLN-HPNIIK 63
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRI----IAKGHYSERAAANLCRQMVTVVHYCHSMG 188
++E++ + ++M+ GG+L +I + E + Q+ + Y HS
Sbjct: 64 YYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK 123
Query: 189 VMHRDLKPEN-FLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLRRN- 245
++HRD+KP+N FL S + +K DFG+S V D+ K +VG+ YY++PE+ +
Sbjct: 124 ILHRDIKPQNIFLTS----NGLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKP 179
Query: 246 YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNI-SSSAKDIV 304
Y ++DIWS G +LY L + PF GE + IL+G P P+ SS +++V
Sbjct: 180 YNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQY----PPIPSQYSSELRNLV 235
Query: 305 KKMLHADPKERLSAAEVLNHP 325
+L DP+ER S A++L P
Sbjct: 236 SSLLQKDPEERPSIAQILQSP 256
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 208 bits (531), Expect = 1e-63
Identities = 88/286 (30%), Positives = 140/286 (48%), Gaps = 33/286 (11%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
+ + FG+ +G G F L K+T +++A K + R+LI V+ V+ E +++ L G
Sbjct: 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNG 60
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
H I++L ++D ++ +++ GEL I G E+ +++ + Y HS
Sbjct: 61 HPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHS 120
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV-------------------- 226
G++HRDLKPEN L +D +K TDFG + P
Sbjct: 121 KGIIHRDLKPENILLD---KDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRR 177
Query: 227 -FKDLVGSAYYVAPEVLRRNY-GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG 284
F VG+A YV+PE+L G +D+W+ G I+Y +L+G PPF G E F IL+
Sbjct: 178 RFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKL 237
Query: 285 HIDFSSDPWPNISSSAKDIVKKMLHADPKERL----SAAEVLNHPW 326
F PN AKD+++K+L DP++RL E+ HP+
Sbjct: 238 EYSFP----PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPF 279
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 202 bits (515), Expect = 5e-62
Identities = 89/255 (34%), Positives = 126/255 (49%), Gaps = 44/255 (17%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G FG YL K T ++ A K I + +E++ RE++I+ L H NIV+L
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKED--SSSLLEELLREIEILKKLN-HPNIVKLY 57
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRD 193
G +ED + + L+M+ C GG L D + G SE + Q++ + Y HS G++HRD
Sbjct: 58 GVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRD 117
Query: 194 LKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLVGSAYYVAPEVLRRN--YGAEA 250
LKPEN L S ++ +K DFGLS + K +VG+ Y+APEVL Y ++
Sbjct: 118 LKPENILLDS--DNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKS 175
Query: 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310
DIWS GVILY L KD+++KML
Sbjct: 176 DIWSLGVILYEL-----------------------------------PELKDLIRKMLQK 200
Query: 311 DPKERLSAAEVLNHP 325
DP++R SA E+L H
Sbjct: 201 DPEKRPSAKEILEHL 215
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 199 bits (507), Expect = 3e-60
Identities = 91/265 (34%), Positives = 138/265 (52%), Gaps = 19/265 (7%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+ +G +G +L K T +A K I +I ++ V+ V E I+ +V+L
Sbjct: 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQ-SPYVVKLY 59
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
+++ + ++ L+M+ GG+L + G E A ++V + Y HS G++HRDL
Sbjct: 60 YSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDL 119
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVF-------FKPGDVFKD--LVGSAYYVAPEV-LRR 244
KP+N L S+ LK TDFGLS D +D +VG+ Y+APEV L +
Sbjct: 120 KPDNILIDSNGH---LKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQ 176
Query: 245 NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
+ D WS G ILY L G+PPF GET + IF IL G I++ D +S A D++
Sbjct: 177 GHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPED--VEVSDEAIDLI 234
Query: 305 KKMLHADPKERL---SAAEVLNHPW 326
K+L DP++RL S E+ NHP+
Sbjct: 235 SKLLVPDPEKRLGAKSIEEIKNHPF 259
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 189 bits (483), Expect = 1e-56
Identities = 91/266 (34%), Positives = 136/266 (51%), Gaps = 20/266 (7%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
G LGRG FG YL KDT + A KS+ + +++E + RE++I+ L H NIV
Sbjct: 5 GELLGRGSFGSVYLALDKDTGELMAVKSVELSG-DSEEELEALEREIRILSSLQ-HPNIV 62
Query: 132 ELKGAYEDR--HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGV 189
G+ D +++N+ ++ +GG L + G E RQ++ + Y HS G+
Sbjct: 63 RYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGI 122
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK---PGDVFKDLVGSAYYVAPEVLRRN- 245
+HRD+K N L S +K DFG + G+ + G+ Y++APEV+R
Sbjct: 123 VHRDIKGANILVDSDGV---VKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEE 179
Query: 246 YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNI----SSSAK 301
YG ADIWS G + + +G PP W E A+ I S +P P I S AK
Sbjct: 180 YGRAADIWSLGCTVIEMATGKPP-WSELGNP-MAALY--KIGSSGEP-PEIPEHLSEEAK 234
Query: 302 DIVKKMLHADPKERLSAAEVLNHPWM 327
D ++K L DPK+R +A E+L HP++
Sbjct: 235 DFLRKCLRRDPKKRPTADELLQHPFL 260
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 182 bits (463), Expect = 8e-54
Identities = 86/262 (32%), Positives = 135/262 (51%), Gaps = 18/262 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G FG LV K + FA K + R ++ E + E +I+ H IV+L
Sbjct: 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILE-ECNHPFIVKLY 59
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
++D+ + ++M+ C GGEL+ + +G + E A +V Y H+ G+++RDL
Sbjct: 60 RTFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDL 119
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNYGAEADIW 253
KPEN L S+ +K DFG + K G G+ YVAPE+ L + Y D W
Sbjct: 120 KPENLLLDSNGY---VKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKGYDFSVDYW 176
Query: 254 SAGVILYILLSGVPPFWGETE--QSIFDAILRG--HIDFSSDPWPNISSSAKDIVKKMLH 309
S G++LY LL+G PPF + E I++ IL+G ++F + I +AKD++K++L
Sbjct: 177 SLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPN----YIDKAAKDLIKQLLR 232
Query: 310 ADPKERL-----SAAEVLNHPW 326
+P+ERL ++ H W
Sbjct: 233 RNPEERLGNLKGGIKDIKKHKW 254
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262 |
| >gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 181 bits (462), Expect = 3e-53
Identities = 93/274 (33%), Positives = 146/274 (53%), Gaps = 17/274 (6%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
+ + F + LG G FG LV HK + + +A K +S K++ VE V E +I+ +
Sbjct: 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIR- 59
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
H +V L G+++D ++ L+M+ GGELF + G + E A Q+V + Y HS
Sbjct: 60 HPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHS 119
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRN 245
+ +++RDLKPEN L S D +K TDFG + K L G+ Y+APE+ L +
Sbjct: 120 LDIVYRDLKPENLLLDS---DGYIKITDFGFAKRVKGRT--YTLCGTPEYLAPEIILSKG 174
Query: 246 YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305
YG D W+ G+++Y +L+G PPF+ + I++ IL G + F S S AKD+++
Sbjct: 175 YGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPS----FFSPDAKDLIR 230
Query: 306 KMLHADPKERL-----SAAEVLNHPWMR-VDGDA 333
+L D +RL ++ NHPW +D A
Sbjct: 231 NLLQVDLTKRLGNLKNGVNDIKNHPWFAGIDWIA 264
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 176 bits (448), Expect = 1e-51
Identities = 81/258 (31%), Positives = 131/258 (50%), Gaps = 14/258 (5%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
++G+G FG Y HK T ++ A K I + E + E+QI+ H NIV+
Sbjct: 6 EKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKCK-HPNIVK 61
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH-YSERAAANLCRQMVTVVHYCHSMGVMH 191
G+Y + + ++M+ C+GG L D + + +E A +C++++ + Y HS G++H
Sbjct: 62 YYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIH 121
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEA 250
RD+K N L +S E +K DFGLS +VG+ Y++APEV+ Y +A
Sbjct: 122 RDIKAANILLTSDGE---VKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYKA 178
Query: 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILR-GHIDFSSDPWP-NISSSAKDIVKKML 308
DIWS G+ L G PP+ +E A+ + P S KD +KK L
Sbjct: 179 DIWSLGITAIELAEGKPPY---SELPPMKALFKIATNGPPGLRNPEKWSDEFKDFLKKCL 235
Query: 309 HADPKERLSAAEVLNHPW 326
+P++R +A ++L HP+
Sbjct: 236 QKNPEKRPTAEQLLKHPF 253
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 172 bits (439), Expect = 2e-50
Identities = 81/262 (30%), Positives = 130/262 (49%), Gaps = 8/262 (3%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ R +G+G FG +V +DTK+ FA K ++ +K + + V +V E +I+ L H
Sbjct: 2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELN-HP 60
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
+V L +++D ++ L++DL GG+L + K +SE ++V + Y HS G
Sbjct: 61 FLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKG 120
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL-RRNYG 247
++HRD+KP+N L E + TDF ++ P + G+ Y+APEVL R+ Y
Sbjct: 121 IIHRDIKPDNILLD---EQGHVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQGYS 177
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKM 307
D WS GV Y L G P+ G + D I S+ A D + K+
Sbjct: 178 VAVDWWSLGVTAYECLRGKRPYRGHSRTIR-DQIRAKQETADVLYPATWSTEAIDAINKL 236
Query: 308 LHADPKERLSAA--EVLNHPWM 327
L DP++RL ++ NHP+
Sbjct: 237 LERDPQKRLGDNLKDLKNHPYF 258
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 173 bits (437), Expect = 7e-49
Identities = 96/295 (32%), Positives = 139/295 (47%), Gaps = 30/295 (10%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y R+LG G FG YL + + A K ++ + +VE RE+QI+ L
Sbjct: 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPP 58
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRI---IAKGHYSERAAANLCRQMVTVVHYCH 185
NIV+L ++D S+ L+M+ GG L D + KG SE A + Q+++ + Y H
Sbjct: 59 NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH 118
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV-------FKDLVGSAYYVA 238
S G++HRD+KPEN L + +K DFGL+ VG+ Y+A
Sbjct: 119 SKGIIHRDIKPENILLDR--DGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMA 176
Query: 239 PEVLR----RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI-------- 286
PEVL + +DIWS G+ LY LL+G+PPF GE S L+ I
Sbjct: 177 PEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLK-IILELPTPSL 235
Query: 287 --DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLD 339
S IS +A D++KK+L DPK RLS++ L+H + D
Sbjct: 236 ASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKLKESDLSD 290
|
Length = 384 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 160 bits (407), Expect = 9e-46
Identities = 80/260 (30%), Positives = 128/260 (49%), Gaps = 10/260 (3%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ + +G FG YL + T FA K + +I ++ V +V+ E IM + +
Sbjct: 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAK 61
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L +++ + + L+M+ GG+ I G E A ++V V H G++HR
Sbjct: 62 LYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHR 121
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEA-D 251
D+KPEN L + LK TDFGLS + G K VG+ Y+APE + + D
Sbjct: 122 DIKPENLLIDQTGH---LKLTDFGLS---RNGLENKKFVGTPDYLAPETILGVGDDKMSD 175
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
WS G +++ L G PPF ET ++FD IL I++ + S A D++ ++L D
Sbjct: 176 WWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMD 235
Query: 312 PKERLSA---AEVLNHPWMR 328
P +RL A E+ +HP+ +
Sbjct: 236 PAKRLGANGYQEIKSHPFFK 255
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 158 bits (403), Expect = 4e-45
Identities = 80/266 (30%), Positives = 126/266 (47%), Gaps = 18/266 (6%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH 127
Y G +GRG FGV Y + +T A K IS K I + ++ + +E+ ++ +L H
Sbjct: 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEK-IKEEALKSIMQEIDLLKNLK-H 58
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM 187
NIV+ G+ E S+ +I++ G L I G + E A Q++ + Y H
Sbjct: 59 PNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQ 118
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF-KPGDVFKDLVGSAYYVAPEVLR-RN 245
GV+HRD+K N L + +D +K DFG++ +VG+ Y++APEV+
Sbjct: 119 GVIHRDIKAANILTT---KDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSG 175
Query: 246 YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP----NISSSAK 301
+DIWS G + LL+G PP++ + I D P IS K
Sbjct: 176 ASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRI-------VQDDHPPLPEGISPELK 228
Query: 302 DIVKKMLHADPKERLSAAEVLNHPWM 327
D + + DP R +A ++L HPW+
Sbjct: 229 DFLMQCFQKDPNLRPTAKQLLKHPWI 254
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 161 bits (410), Expect = 4e-45
Identities = 89/286 (31%), Positives = 138/286 (48%), Gaps = 37/286 (12%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+GRG FG +LV KDT Q +A K + +I R+ + VR E I+ IV+L
Sbjct: 9 IGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADS-PWIVKLY 67
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
+++D + L+M+ GG+L + +I K + E A ++V + H +G +HRD+
Sbjct: 68 YSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDI 127
Query: 195 KPENFLFSSSAEDSPLKATDFGLS--------------------------VFFKPGDV-- 226
KP+N L + +K DFGL V +
Sbjct: 128 KPDNILIDADGH---IKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRR 184
Query: 227 --FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR 283
VG+ Y+APEVLR YG E D WS GVILY +L G PPF+ +T Q ++ I+
Sbjct: 185 VRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIIN 244
Query: 284 GHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAE-VLNHPWMR 328
P P +S A D++ ++L DP++RL + E + +HP+ +
Sbjct: 245 WKESLRFPPDPPVSPEAIDLICRLL-CDPEDRLGSFEEIKSHPFFK 289
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 157 bits (400), Expect = 1e-44
Identities = 81/264 (30%), Positives = 128/264 (48%), Gaps = 20/264 (7%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR----REVQIMHHLTGHRN 129
LG+G GV Y V HK T + +A K I + D E+ R RE++ +
Sbjct: 8 VLGQGSSGVVYKVRHKPTGKIYALKKI------HVDGDEEFRKQLLRELKTLRS-CESPY 60
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM-G 188
+V+ GA+ ++++++ GG L D + G E A + RQ++ + Y H+
Sbjct: 61 VVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRH 120
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG-DVFKDLVGSAYYVAPEVLR-RNY 246
++HRD+KP N L +S E +K DFG+S + D VG+ Y++PE ++ +Y
Sbjct: 121 IIHRDIKPSNLLINSKGE---VKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESY 177
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP--NISSSAKDIV 304
ADIWS G+ L G PF Q F +++ D P S +D +
Sbjct: 178 SYAADIWSLGLTLLECALGKFPFLP-PGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFI 236
Query: 305 KKMLHADPKERLSAAEVLNHPWMR 328
L DPK+R SAAE+L HP+++
Sbjct: 237 SACLQKDPKKRPSAAELLQHPFIK 260
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 154 bits (393), Expect = 2e-43
Identities = 83/293 (28%), Positives = 131/293 (44%), Gaps = 47/293 (16%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDD---VEDVRREVQIMHHLT 125
Y +LG G +GV Y K T + A K I +L N ++ +R E+ ++ L
Sbjct: 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKI---RLDNEEEGIPSTALR-EISLLKELK 56
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFD--RIIAK--GHYSERAAANLCRQMVTVV 181
H NIV+L + L+ + C D + + K G S ++ Q++ +
Sbjct: 57 -HPNIVKLLDVIHTERKLYLVFEYCD----MDLKKYLDKRPGPLSPNLIKSIMYQLLRGL 111
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLVGSAYYVAPE 240
YCHS ++HRDLKP+N L + LK DFGL+ F P + V + +Y APE
Sbjct: 112 AYCHSHRILHRDLKPQNILINRDGV---LKLADFGLARAFGIPLRTYTHEVVTLWYRAPE 168
Query: 241 VL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQS----IFDAI----------LRG 284
+L ++Y DIWS G I +++G P F G++E IF + +
Sbjct: 169 ILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTK 228
Query: 285 HIDFSSDP--W---------PNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
D+ + P + D++ KML +P +R+SA E L HP+
Sbjct: 229 LPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPY 281
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 155 bits (393), Expect = 2e-43
Identities = 80/266 (30%), Positives = 136/266 (51%), Gaps = 17/266 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+G G FG +LV + ++ +A K ++ ++I + V E +++ ++ H I+ L
Sbjct: 9 VGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVS-HPFIIRLF 67
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
D+ + ++M+ GGELF + G +S ++V + Y HS +++RDL
Sbjct: 68 WTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDL 127
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL-RRNYGAEADIW 253
KPEN L + +K TDFG + K D L G+ Y+APEV+ + + D W
Sbjct: 128 KPENILLDK---EGHIKLTDFGFAK--KLRDRTWTLCGTPEYLAPEVIQSKGHNKAVDWW 182
Query: 254 SAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPK 313
+ G+++Y +L G PPF+ + I++ IL G ++F ++ AKD++KK+L D
Sbjct: 183 ALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPR----HLDLYAKDLIKKLLVVDRT 238
Query: 314 ERL-----SAAEVLNHPWMR-VDGDA 333
RL A +V NH W + VD D
Sbjct: 239 RRLGNMKNGADDVKNHRWFKSVDWDD 264
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291 |
| >gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Score = 154 bits (391), Expect = 4e-43
Identities = 83/291 (28%), Positives = 129/291 (44%), Gaps = 39/291 (13%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED-VRREVQIMHHLTG 126
Y +G G G+ + ++T + A K ++ R+L + + RE++ +
Sbjct: 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRL--EGGIPNQALREIKALQAC-Q 57
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH-YSERAAANLCRQMVTVVHYCH 185
H +V+L + L+M+ L + + + E + R ++ V Y H
Sbjct: 58 HPYVVKLLDVFPHGSGFVLVMEYMPSD-LSEVLRDEERPLPEAQVKSYMRMLLKGVAYMH 116
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD--VFKDLVGSAYYVAPEVL- 242
+ G+MHRDLKP N L S+ D LK DFGL+ F + ++ V + +Y APE+L
Sbjct: 117 ANGIMHRDLKPANLLISA---DGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLY 173
Query: 243 -RRNYGAEADIWSAGVILYILLSGVPPFWGET--EQ--SIFDAI---------------L 282
R Y D+W+ G I LL+G P F GE EQ +F +
Sbjct: 174 GARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPD 233
Query: 283 RGHIDFSSD---PW----PNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
I F P P+ S A D++K +L DP +RLSAAE L HP+
Sbjct: 234 YNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPY 284
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 151 bits (384), Expect = 3e-42
Identities = 80/271 (29%), Positives = 124/271 (45%), Gaps = 33/271 (12%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+G+G FG V K + K I + ++ + V EV I+ L H NIV
Sbjct: 7 TIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVS-EVNILRELK-HPNIVR- 63
Query: 134 KGAYEDR------HSVNLIMDLCAGGELFDRIIAK-----GHYSERAAANLCRQMVTVVH 182
Y DR ++ ++M+ C GG+L ++I K + E + Q++ ++
Sbjct: 64 ---YYDRIIDRSNQTLYIVMEYCEGGDL-AQLIQKCKKERKYIEEEFIWRILTQLLLALY 119
Query: 183 YCH-----SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF-KDLVGSAYY 236
CH V+HRDLKP N +F + + +K DFGL+ F K VG+ YY
Sbjct: 120 ECHNRSDPGNTVLHRDLKPAN-IFLDANNN--VKLGDFGLAKILGHDSSFAKTYVGTPYY 176
Query: 237 VAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295
++PE L Y ++DIWS G ++Y L + PPF + + I G P
Sbjct: 177 MSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKF----RRIPY 232
Query: 296 ISSSA-KDIVKKMLHADPKERLSAAEVLNHP 325
SS +++K ML+ DP +R S E+L P
Sbjct: 233 RYSSELNEVIKSMLNVDPDKRPSTEELLQLP 263
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 151 bits (383), Expect = 2e-41
Identities = 89/264 (33%), Positives = 128/264 (48%), Gaps = 19/264 (7%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
++G+G +G +L KDT + A K + L ++V V E I+ T +V+L
Sbjct: 8 QVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTT-TKSEWLVKL 66
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRD 193
A++D + L M+ GG+ + G SE A +M V H +G +HRD
Sbjct: 67 LYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRD 126
Query: 194 LKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEADI 252
LKPENFL +S +K TDFGLS +VGS Y+APEVLR + Y D
Sbjct: 127 LKPENFLIDASGH---IKLTDFGLSKGIV--TYANSVVGSPDYMAPEVLRGKGYDFTVDY 181
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAIL-------RGHIDFSSDPWPNISSSAKDIVK 305
WS G +LY L G PPF G T ++ + R D DP N+S A D++
Sbjct: 182 WSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYD---DPRFNLSDEAWDLIT 238
Query: 306 KMLHADPKERLSAAE-VLNHPWMR 328
K++ DP R + E + NHP+ +
Sbjct: 239 KLI-NDPSRRFGSLEDIKNHPFFK 261
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333 |
| >gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Score = 149 bits (378), Expect = 4e-41
Identities = 89/277 (32%), Positives = 140/277 (50%), Gaps = 37/277 (13%)
Query: 78 GQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN--IVELKG 135
G +G YLV HK+T+Q+FA K I+ + LI R+ ++ V E I LT N +V +
Sbjct: 12 GAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDI---LTFAENPFVVSMFC 68
Query: 136 AYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLK 195
++E + + ++M+ GG+ + G A + V + Y H+ G++HRDLK
Sbjct: 69 SFETKRHLCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLK 128
Query: 196 PENFLFSSSAEDSPLKATDFGLS--------VFFKPGDVFKD--------LVGSAYYVAP 239
P+N L +S +K TDFGLS G + KD + G+ Y+AP
Sbjct: 129 PDNLLITSMGH---IKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAP 185
Query: 240 EV-LRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPN--- 295
EV LR+ YG D W+ G+ILY L G PF+G+T + +F ++ I+ WP
Sbjct: 186 EVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIE-----WPEGDE 240
Query: 296 -ISSSAKDIVKKMLHADPKERL---SAAEVLNHPWMR 328
+ + A+D++ ++L +P ERL A EV H +
Sbjct: 241 ALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFL 277
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 147 bits (373), Expect = 2e-40
Identities = 82/287 (28%), Positives = 127/287 (44%), Gaps = 42/287 (14%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR--REVQIMHHLTGHRNI 130
++G G +GV Y K T + A K I R + RE++++ L H NI
Sbjct: 5 GKIGEGTYGVVYKARDKLTGEIVAIKKIKLRF---ESEGIPKTALREIKLLKELN-HPNI 60
Query: 131 VELKGAYEDRHSVNLIMDLCAGG--ELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
++L + + + L+ + +L + E + Q++ + +CHS G
Sbjct: 61 IKLLDVFRHKGDLYLVFEFMDTDLYKLIKD--RQRGLPESLIKSYLYQLLQGLAFCHSHG 118
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVL--RRN 245
++HRDLKPEN L + + LK DFGL+ F P + V + +Y APE+L +
Sbjct: 119 ILHRDLKPENLLIN---TEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKG 175
Query: 246 YGAEADIWSAGVILYILLSGVPPFWG--ETEQ--SIFDAI-------LRGHIDFSSD--- 291
Y DIWS G I LLS P F G E +Q IF + + +
Sbjct: 176 YSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKF 235
Query: 292 --------PW----PNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
P PN S A D++ +MLH DP +R++A + L HP+
Sbjct: 236 SFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPY 282
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Score = 146 bits (371), Expect = 5e-40
Identities = 84/295 (28%), Positives = 136/295 (46%), Gaps = 49/295 (16%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED-----VRREVQIMHH 123
Y G++LG G + V Y K+T + A K I KL R + +D RE++++
Sbjct: 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKI---KLGERKEAKDGINFTALREIKLLQE 58
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAG---GELFDRII--AKGHYSERAAANLCRQMV 178
L H NI+ L + + ++NL+ + + D+ I + +
Sbjct: 59 LK-HPNIIGLLDVFGHKSNINLVFEFMETDLEKVIKDKSIVLTPADIK-----SYMLMTL 112
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF-KPGDVFKDLVGSAYYV 237
+ Y HS ++HRDLKP N L +S D LK DFGL+ F P V + +Y
Sbjct: 113 RGLEYLHSNWILHRDLKPNNLLIAS---DGVLKLADFGLARSFGSPNRKMTHQVVTRWYR 169
Query: 238 APEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQS----IFDAI---------- 281
APE+L R+YG D+WS G I LL VP G+++ IF+A+
Sbjct: 170 APELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPG 229
Query: 282 ---LRGHIDFSSDP-------WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
L +++F P +P S A D+++++L +P +R++A + L HP+
Sbjct: 230 VTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPY 284
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298 |
| >gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 144 bits (365), Expect = 5e-39
Identities = 86/263 (32%), Positives = 137/263 (52%), Gaps = 16/263 (6%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
G LG G FG + HK T + +A K + R+++ V+ V +E I+ L+ H IV
Sbjct: 23 GETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELS-HPFIV 81
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
+ +++D + V +++ GGELF + G + A ++V Y HS +++
Sbjct: 82 NMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIY 141
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEA 250
RDLKPEN L + +K TDFG + K D L G+ Y+APEV++ + +G
Sbjct: 142 RDLKPENLLLDN---KGHVKVTDFGFAK--KVPDRTFTLCGTPEYLAPEVIQSKGHGKAV 196
Query: 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310
D W+ GV+LY ++G PPF+ +T I++ IL G + F + W A+D+VK +L
Sbjct: 197 DWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPN--W--FDGRARDLVKGLLQT 252
Query: 311 DPKERLSA-----AEVLNHPWMR 328
D +RL A+V NHP+
Sbjct: 253 DHTKRLGTLKGGVADVKNHPYFH 275
|
Length = 329 |
| >gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 141 bits (358), Expect = 4e-38
Identities = 89/293 (30%), Positives = 140/293 (47%), Gaps = 43/293 (14%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG+G G +LV K T + FA K + +++I R+ V+ V E +I+ H +
Sbjct: 7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEIL-ATLDHPFLPT 65
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTVVHYCHSMGVM 190
L +++ + L+MD C GGELF + SE A +++ + Y H +G++
Sbjct: 66 LYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIV 125
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSV----------------------------FFK 222
+RDLKPEN L E + +DF LS F
Sbjct: 126 YRDLKPENILLH---ESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFS 182
Query: 223 PGDVFK--DLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFD 279
F+ VG+ Y+APEV+ + +G+ D W+ G++LY +L G PF G F
Sbjct: 183 EEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFS 242
Query: 280 AILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERL----SAAEVLNHPWMR 328
IL+ + F P +SSSA+D+++K+L DP +RL AAE+ HP+ R
Sbjct: 243 NILKKEVTFPGS--PPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFR 293
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 137 bits (348), Expect = 4e-37
Identities = 84/269 (31%), Positives = 138/269 (51%), Gaps = 17/269 (6%)
Query: 73 RELGRGQFGVTYLV---THKDTKQQFACKSISSRKLINR-DDVEDVRREVQIMHHLTGHR 128
R LG G +G +LV D + +A K + ++ + E R E Q++ +
Sbjct: 6 RVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCP 65
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
+V L A++ ++LI+D GGELF + + H++E ++V + + H +G
Sbjct: 66 FLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLG 125
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFK--DLVGSAYYVAPEVLRR-- 244
+++RD+K EN L S + + TDFGLS F + + G+ Y+APEV+R
Sbjct: 126 IIYRDIKLENILLDS---EGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGS 182
Query: 245 -NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPN-ISSSAKD 302
+ D WS GV+ + LL+G PF + EQ+ I R I S P+P +S+ A+D
Sbjct: 183 GGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISR-RILKSKPPFPKTMSAEARD 241
Query: 303 IVKKMLHADPKERL---SAAEVLNHPWMR 328
++K+L DPK+RL A E+ NHP+ +
Sbjct: 242 FIQKLLEKDPKKRLGANGADEIKNHPFFQ 270
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 136 bits (344), Expect = 8e-37
Identities = 81/261 (31%), Positives = 126/261 (48%), Gaps = 16/261 (6%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACK--SISSRKLINRDDVEDVRREVQIMHHLTGHRN 129
G LG G FG Y + D FA K S++ ++ V+ + +E+ ++ L H N
Sbjct: 5 GELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQ-HPN 63
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGV 189
IV+ G + ++ + ++L GG L + G + E RQ++ + Y H
Sbjct: 64 IVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNT 123
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR--NYG 247
+HRD+K N L ++ +K DFG++ K GS Y++APEV+ + YG
Sbjct: 124 VHRDIKGANILVDTNGV---VKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYG 180
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD--PWPN-ISSSAKDIV 304
ADIWS G + + +G PP W + E A+ I S + P P+ +S AKD +
Sbjct: 181 LAADIWSLGCTVLEMATGKPP-WSQLEG--VAAVF--KIGRSKELPPIPDHLSDEAKDFI 235
Query: 305 KKMLHADPKERLSAAEVLNHP 325
K L DP R +AAE+L HP
Sbjct: 236 LKCLQRDPSLRPTAAELLEHP 256
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 136 bits (345), Expect = 1e-36
Identities = 82/270 (30%), Positives = 132/270 (48%), Gaps = 16/270 (5%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
D R Y ++G G G Y T + T ++ A K + + + + E + E+ IM
Sbjct: 15 GDPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMR----LRKQNKELIINEILIMK 70
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHY-SERAAANLCRQMVTVV 181
H NIV+ +Y + ++M+ GG L D I +E A +CR+++ +
Sbjct: 71 DCK-HPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGL 129
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDLVGSAYYVAPE 240
Y HS V+HRD+K +N L S +K DFG + K +VG+ Y++APE
Sbjct: 130 EYLHSQNVIHRDIKSDNILLSKDGS---VKLADFGFAAQLTKEKSKRNSVVGTPYWMAPE 186
Query: 241 VLRRN-YGAEADIWSAGVILYILLSGVPPFWGET-EQSIFDAILRGHIDFS-SDPWPNIS 297
V++R YG + DIWS G++ + G PP+ E +++F +G + W S
Sbjct: 187 VIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKW---S 243
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
KD + K L DP++R SA E+L HP++
Sbjct: 244 PEFKDFLNKCLVKDPEKRPSAEELLQHPFL 273
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 135 bits (343), Expect = 2e-36
Identities = 92/297 (30%), Positives = 133/297 (44%), Gaps = 47/297 (15%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR----REVQIMH 122
N Y +G G +GV +K T + A K K +D EDV+ REV+++
Sbjct: 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIK-----KFKESEDDEDVKKTALREVKVLR 55
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR-QMVTVV 181
L H NIV LK A+ + + L+ + L + + A A Q++ +
Sbjct: 56 QLR-HENIVNLKEAFRRKGRLYLVFEYV-ERTLLELLEASPGGLPPDAVRSYIWQLLQAI 113
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF--KPGDVFKDLVGSAYYVAP 239
YCHS ++HRD+KPEN L S E LK DFG + +P D V + +Y AP
Sbjct: 114 AYCHSHNIIHRDIKPENILVS---ESGVLKLCDFGFARALRARPASPLTDYVATRWYRAP 170
Query: 240 EVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETE--------QSIFDAILRGHIDFS 289
E+L NYG D+W+ G I+ LL G P F G+++ + + FS
Sbjct: 171 ELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFS 230
Query: 290 SDP-------------------WPNISSS-AKDIVKKMLHADPKERLSAAEVLNHPW 326
S+P +P SS A D +K L DPKERL+ E+L HP+
Sbjct: 231 SNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPY 287
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 135 bits (342), Expect = 3e-36
Identities = 88/283 (31%), Positives = 141/283 (49%), Gaps = 25/283 (8%)
Query: 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREV 118
G P + N ++ ++G G G+ + T K T +Q A K + RK R E + EV
Sbjct: 15 GDPRSYLDN-FV---KIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRR---ELLFNEV 67
Query: 119 QIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
IM H NIVE+ +Y + ++M+ GG L D I+ +E A +C ++
Sbjct: 68 VIMRDYQ-HPNIVEMYSSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLAVL 125
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD------LVG 232
+ + H+ GV+HRD+K ++ L +S D +K +DFG V K+ LVG
Sbjct: 126 KALSFLHAQGVIHRDIKSDSILLTS---DGRVKLSDFGFC-----AQVSKEVPRRKSLVG 177
Query: 233 SAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
+ Y++APEV+ R YG E DIWS G+++ ++ G PP++ E I +
Sbjct: 178 TPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKN 237
Query: 292 PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDAS 334
+S + + +ML DP +R +AAE+LNHP++ G S
Sbjct: 238 L-HKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGPPS 279
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 135 bits (342), Expect = 4e-36
Identities = 85/293 (29%), Positives = 137/293 (46%), Gaps = 44/293 (15%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y ++LG G FG YL +K+T + A K + +K + ++ ++R EV+ + L H
Sbjct: 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMK-KKFYSWEECMNLR-EVKSLRKLNEHP 58
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA--KGHYSERAAANLCRQMVTVVHYCHS 186
NIV+LK + + + + + G L+ + +SE ++ Q++ + + H
Sbjct: 59 NIVKLKEVFRENDELYFVFE-YMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHK 117
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-- 244
G HRDLKPEN L S +K DFGL+ + + D V + +Y APE+L R
Sbjct: 118 HGFFHRDLKPENLLVSGP---EVVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLRST 174
Query: 245 NYGAEADIWSAGVILYILLSGVPPFWG--ETEQ--SIFDAILRGHIDFSSDPW------- 293
+Y + DIW+ G I+ L + P F G E +Q I ++L G + W
Sbjct: 175 SYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKIC-SVL-GT--PTKQDWPEGYKLA 230
Query: 294 -------------------PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
PN S A D++K ML DPK+R +A++ L HP+
Sbjct: 231 SKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 135 bits (342), Expect = 5e-36
Identities = 82/302 (27%), Positives = 126/302 (41%), Gaps = 68/302 (22%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR--------REVQIMHHL 124
++G G +G Y +K T + A K I +E+ + RE++++ L
Sbjct: 5 AQIGEGTYGQVYKARNKKTGELVALKKI---------RMENEKEGFPITAIREIKLLQKL 55
Query: 125 TGHRNIVELKGAYEDRHSVNLIM-------DLCAGGELFDRIIAKGHYSERAAANLCRQM 177
H NIV LK + ++ M DL G L D + ++E +Q+
Sbjct: 56 R-HPNIVRLKEIVTSKGKGSIYMVFEYMDHDL-TG--LLDS--PEVKFTESQIKCYMKQL 109
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP--GDVFKDLVGSAY 235
+ + Y HS G++HRD+K N L ++ LK DFGL+ + + + V + +
Sbjct: 110 LEGLQYLHSNGILHRDIKGSNILINNDGV---LKLADFGLARPYTKRNSADYTNRVITLW 166
Query: 236 YVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR--GHIDFSSD 291
Y PE+L YG E D+WS G IL L G P F G TE + I G +
Sbjct: 167 YRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDEN- 225
Query: 292 PWPN---------------------------ISSSAKDIVKKMLHADPKERLSAAEVLNH 324
WP I SA D++ K+L DPK+R+SA + L H
Sbjct: 226 -WPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284
Query: 325 PW 326
+
Sbjct: 285 EY 286
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Score = 134 bits (339), Expect = 2e-35
Identities = 83/261 (31%), Positives = 132/261 (50%), Gaps = 15/261 (5%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG LV K T + +A K + +I +D+V E +++ + T H + LK
Sbjct: 3 LGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQN-TRHPFLTALK 61
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
+++ + +M+ GGELF + + +SE A ++V+ + Y HS V++RDL
Sbjct: 62 YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDL 121
Query: 195 KPENFLFSSSAEDSPLKATDFGL-SVFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADI 252
K EN + +D +K TDFGL G K G+ Y+APEVL N YG D
Sbjct: 122 KLENLMLD---KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDW 178
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
W GV++Y ++ G PF+ + + +F+ IL I F +S AK ++ +L DP
Sbjct: 179 WGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDP 234
Query: 313 KERL-----SAAEVLNHPWMR 328
K+RL A E++ H +
Sbjct: 235 KQRLGGGPEDAKEIMEHRFFA 255
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 132 bits (335), Expect = 2e-35
Identities = 78/268 (29%), Positives = 130/268 (48%), Gaps = 22/268 (8%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
G ++G G FG Y + DT + A K I + + ++++ E++++ L H N+V
Sbjct: 5 GNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDN-DPKTIKEIADEMKVLELLK-HPNLV 62
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
+ G R V + M+ C+GG L + + E Q++ + Y HS G++H
Sbjct: 63 KYYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVH 122
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-----GDVFKDLVGSAYYVAPEVLRRN- 245
RD+KP N + +K DFG +V K G+ + L G+ Y+APEV+
Sbjct: 123 RDIKPANIFLDHN---GVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGK 179
Query: 246 ---YGAEADIWSAGVILYILLSGVPPFWG-ETEQSIFDAILRGHIDFSSDPWP---NISS 298
+G ADIWS G ++ + +G P+ + E I + GH P P +S
Sbjct: 180 GKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGH----KPPIPDSLQLSP 235
Query: 299 SAKDIVKKMLHADPKERLSAAEVLNHPW 326
KD + + L +DPK+R +A+E+L HP+
Sbjct: 236 EGKDFLDRCLESDPKKRPTASELLQHPF 263
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 132 bits (333), Expect = 4e-35
Identities = 80/265 (30%), Positives = 134/265 (50%), Gaps = 25/265 (9%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN----RDDVEDVRREVQIMHHL--TGHR 128
+GRG +G Y H T + A K +IN DDV D++REV ++ L +
Sbjct: 9 IGRGAYGAVYRGKHVPTGRVVALK------IINLDTPDDDVSDIQREVALLSQLRQSQPP 62
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSM 187
NI + G+Y + +IM+ GG + R + K G +E+ + + R+++ + Y H +
Sbjct: 63 NITKYYGSYLKGPRLWIIMEYAEGGSV--RTLMKAGPIAEKYISVIIREVLVALKYIHKV 120
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEVLR--R 244
GV+HRD+K N L +++ +K DFG++ + VG+ Y++APEV+ +
Sbjct: 121 GVIHRDIKAANILVTNTGN---VKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGK 177
Query: 245 NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAI-LRGHIDFSSDPWPNISSSAKDI 303
Y +ADIWS G+ +Y + +G PP+ ++ F A+ L S ++
Sbjct: 178 YYDTKADIWSLGITIYEMATGNPPY---SDVDAFRAMMLIPKSKPPRLEDNGYSKLLREF 234
Query: 304 VKKMLHADPKERLSAAEVLNHPWMR 328
V L +PKERLSA E+L W++
Sbjct: 235 VAACLDEEPKERLSAEELLKSKWIK 259
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277 |
| >gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 132 bits (335), Expect = 8e-35
Identities = 88/269 (32%), Positives = 142/269 (52%), Gaps = 23/269 (8%)
Query: 73 RELGRGQFGVTYLV---THKDTKQQFACKSISSRKLI-NRDDVEDVRREVQIMHHLTGHR 128
+ LG+G +G + V T DT + FA K + ++ N+ D + E I+ + H
Sbjct: 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVK-HP 60
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
IV+L A++ + LI++ +GGELF + +G + E A ++ + + H G
Sbjct: 61 FIVDLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQG 120
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGL---SVFFKPGDVFKDLVGSAYYVAPEVLRRN 245
+++RDLKPEN L + +K TDFGL S+ G V G+ Y+APE+L R+
Sbjct: 121 IIYRDLKPENILLDAQGH---VKLTDFGLCKESIH--EGTVTHTFCGTIEYMAPEILMRS 175
Query: 246 -YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
+G D WS G ++Y +L+G PPF E + D IL+G ++ P ++ A+D++
Sbjct: 176 GHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLP----PYLTPEARDLL 231
Query: 305 KKMLHADPKERL-----SAAEVLNHPWMR 328
KK+L +P RL AAEV +HP+ R
Sbjct: 232 KKLLKRNPSSRLGAGPGDAAEVQSHPFFR 260
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323 |
| >gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Score = 133 bits (336), Expect = 1e-34
Identities = 88/267 (32%), Positives = 132/267 (49%), Gaps = 18/267 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+GRG FG LV HK +KQ +A K +S ++I R D E IM H IV+L
Sbjct: 51 IGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEW-IVQLH 109
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
A++D + ++M+ GG+L + +++ E+ A ++V + HSMG +HRD+
Sbjct: 110 YAFQDDKYLYMVMEYMPGGDLVN-LMSNYDIPEKWARFYTAEVVLALDAIHSMGFIHRDV 168
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFF-KPGDVFKDL-VGSAYYVAPEVLRRN-----YG 247
KP+N L S LK DFG + G V D VG+ Y++PEVL+ YG
Sbjct: 169 KPDNMLLDKSGH---LKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYG 225
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL--RGHIDFSSDPWPNISSSAKDIVK 305
E D WS GV LY +L G PF+ ++ + I+ + + F D IS AKD++
Sbjct: 226 RECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDD--IEISKQAKDLIC 283
Query: 306 KMLHADPKE--RLSAAEVLNHPWMRVD 330
L R E+ +HP+ + D
Sbjct: 284 AFLTDREVRLGRNGVDEIKSHPFFKND 310
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 128 bits (325), Expect = 6e-34
Identities = 84/269 (31%), Positives = 132/269 (49%), Gaps = 31/269 (11%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
ELG G GV V H+ T + A K+I R IN + + RE+ I+H IV
Sbjct: 7 GELGAGNSGVVSKVLHRPTGKIMAVKTI--RLEINEAIQKQILRELDILHKCN-SPYIVG 63
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRII--AKGHYSERAAANLCRQMVTVVHYCHS-MGV 189
GA+ + +++ M+ GG L D+I+ +G ER + ++ + Y H +
Sbjct: 64 FYGAFYNNGDISICMEYMDGGSL-DKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKI 122
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG----DVFKDLVGSAYYVAPEVLRRN 245
+HRD+KP N L +S + +K DFG+S G + K VG++ Y+APE ++ N
Sbjct: 123 IHRDVKPSNILVNSRGQ---IKLCDFGVS-----GQLVNSLAKTFVGTSSYMAPERIQGN 174
Query: 246 -YGAEADIWSAGVILYILLSG-VP-PFWGETEQSIFDAILRGHID-----FSSDPWPNIS 297
Y ++DIWS G+ L L +G P P + IF+ +L+ ++ S + S
Sbjct: 175 DYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFE-LLQYIVNEPPPRLPSGKF---S 230
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPW 326
+D V L DP+ER S E+L HP+
Sbjct: 231 PDFQDFVNLCLIKDPRERPSYKELLEHPF 259
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 129 bits (325), Expect = 8e-34
Identities = 89/279 (31%), Positives = 137/279 (49%), Gaps = 30/279 (10%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
ELG G FG Y HK+T A K I ++ + +++ED E+ I+ H NIV L
Sbjct: 12 ELGDGAFGKVYKAQHKETGLFAAAKII---QIESEEELEDFMVEIDILSECK-HPNIVGL 67
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGH-YSERAAANLCRQMVTVVHYCHSMGVMHR 192
AY + + ++++ C GG L ++ +E +CRQM+ +++ HS V+HR
Sbjct: 68 YEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHR 127
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEVL------RRN 245
DLK N L + + +K DFG+S K +D +G+ Y++APEV+
Sbjct: 128 DLKAGNILLTLDGD---VKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNP 184
Query: 246 YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNI------SSS 299
Y +ADIWS G+ L L PP E + +L+ S+P P + SSS
Sbjct: 185 YDYKADIWSLGITLIELAQMEPP---HHELNPMRVLLK---ILKSEP-PTLDQPSKWSSS 237
Query: 300 AKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338
D +K L DP +R +AAE+L HP++ D K +
Sbjct: 238 FNDFLKSCLVKDPDDRPTAAELLKHPFVSDQSDN--KAI 274
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280 |
| >gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 129 bits (328), Expect = 1e-33
Identities = 88/313 (28%), Positives = 137/313 (43%), Gaps = 64/313 (20%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN-RDDVEDVR---REVQIMHHLTGHR 128
+ +G G +GV K T ++ A K K+ N DD+ D + RE++++ HL H
Sbjct: 6 KPIGSGAYGVVCSAVDKRTGRKVAIK-----KISNVFDDLIDAKRILREIKLLRHL-RHE 59
Query: 129 NIVELK-----GAYEDRHSVNLIMDLCAGGELFD----RII-AKGHYSERAAANLCRQMV 178
NI+ L + ED + V ++ EL + ++I + ++ Q++
Sbjct: 60 NIIGLLDILRPPSPEDFNDVYIVT------ELMETDLHKVIKSPQPLTDDHIQYFLYQIL 113
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFK----DLVGSA 234
+ Y HS V+HRDLKP N L +S + LK DFGL+ P + K + V +
Sbjct: 114 RGLKYLHSANVIHRDLKPSNILVNS---NCDLKICDFGLARGVDPDEDEKGFLTEYVVTR 170
Query: 235 YYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETE----QSIFDAI------- 281
+Y APE+L Y DIWS G I LL+ P F G I + +
Sbjct: 171 WYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEED 230
Query: 282 -----------------LRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324
+ S +P S A D+++KML DPK+R++A E L H
Sbjct: 231 LKFITSEKARNYLKSLPKKPKKPL-SKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH 289
Query: 325 PWMRVDGDASDKP 337
P++ D D+P
Sbjct: 290 PYLAQLHDPEDEP 302
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330 |
| >gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 129 bits (326), Expect = 1e-33
Identities = 84/287 (29%), Positives = 134/287 (46%), Gaps = 42/287 (14%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI---- 130
+G+G FG Y V KDT++ +A K +S ++++ + +V H G RNI
Sbjct: 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVA----------HTIGERNILVRT 50
Query: 131 --------VELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVH 182
V LK +++ + L+ D +GGELF + +G +SE A ++V +
Sbjct: 51 LLDESPFIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALE 110
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP----GDVFKDLVGSAYYVA 238
+ H +++RDLKPEN L + + DFGLS K G+ Y+A
Sbjct: 111 HLHKYDIVYRDLKPENILLDA---TGHIALCDFGLS---KANLTDNKTTNTFCGTTEYLA 164
Query: 239 PEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296
PEVL + Y D WS GV+++ + G PF+ E Q ++ I G + F P +
Sbjct: 165 PEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRF---PKNVL 221
Query: 297 SSSAKDIVKKMLHADPKERLSA----AEVLNHPWMR-VDGDASDKPL 338
S + VK +L+ +P+ RL A E+ HP+ +D D K
Sbjct: 222 SDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADIDWDLLSKKQ 268
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330 |
| >gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Score = 129 bits (325), Expect = 1e-33
Identities = 78/272 (28%), Positives = 131/272 (48%), Gaps = 21/272 (7%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG+G FG L K T + +A K + ++ DDVE E +++ H + +
Sbjct: 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQ 60
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L ++ + + +M+ GG+L I G + E A ++V + + H G+++R
Sbjct: 61 LHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYR 120
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFK----PGDVFKDLVGSAYYVAPEVLR-RNYG 247
DLK +N L S + +K DFG+ K G G+ Y+APE+L + YG
Sbjct: 121 DLKLDNVLLDS---EGHIKIADFGMC---KEGILGGVTTSTFCGTPDYIAPEILSYQPYG 174
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKM 307
D W+ GV+LY +L+G PF G+ E +F +IL + + +S AK I+K
Sbjct: 175 PAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYPR----WLSKEAKSILKSF 230
Query: 308 LHADPKERLSA-----AEVLNHPWMR-VDGDA 333
L +P++RL ++ HP+ R +D D
Sbjct: 231 LTKNPEKRLGCLPTGEQDIKGHPFFREIDWDK 262
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318 |
| >gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 128 bits (323), Expect = 2e-33
Identities = 81/290 (27%), Positives = 124/290 (42%), Gaps = 46/290 (15%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDV-EDVRREVQIMHHLT--GHRNI 130
E+G G +G Y +T + A K + R ++ + + RE+ ++ L H NI
Sbjct: 6 EIGEGAYGTVYKARDLNTGRFVALKKV--RVPLSEEGIPLSTLREIALLKQLESFEHPNI 63
Query: 131 VEL----KGAYEDRH-SVNLIM-----DLCAGGELFDRIIAKGHYSERAAANLCRQMVTV 180
V L G DR + L+ DL + G +L RQ++
Sbjct: 64 VRLLDVCHGPRTDRELKLTLVFEHVDQDLAT---YLSKCPKPG-LPPETIKDLMRQLLRG 119
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE 240
V + HS ++HRDLKP+N L +S + +K DFGL+ + +V + +Y APE
Sbjct: 120 VDFLHSHRIVHRDLKPQNILVTSDGQ---VKIADFGLARIYSFEMALTSVVVTLWYRAPE 176
Query: 241 VL-RRNYGAEADIWSAGVILYILLSGVPPFWGETE----QSIFD--------------AI 281
VL + +Y D+WS G I L P F G +E IFD ++
Sbjct: 177 VLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSL 236
Query: 282 LRGHIDFSS-----DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
R + P I D++KKML +P +R+SA E L HP+
Sbjct: 237 PRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPY 286
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287 |
| >gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 126 bits (320), Expect = 3e-33
Identities = 82/280 (29%), Positives = 131/280 (46%), Gaps = 17/280 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+G+G FG Y K T Q A K I + D++ED+++E+Q + I +
Sbjct: 7 ECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE--AEDEIEDIQQEIQFLSQCRS-PYITK 63
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
G++ + +IM+ C GG D ++ G E A + R+++ + Y H G +HR
Sbjct: 64 YYGSFLKGSKLWIIMEYCGGGSCLD-LLKPGKLDETYIAFILREVLLGLEYLHEEGKIHR 122
Query: 193 DLKPENFLFSSSAEDSPLKATDFG----LSVFFKPGDVFKDLVGSAYYVAPEVLRRN-YG 247
D+K N L S + +K DFG L+ + F VG+ +++APEV++++ Y
Sbjct: 123 DIKAANILLSEEGD---VKLADFGVSGQLTSTMSKRNTF---VGTPFWMAPEVIKQSGYD 176
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKM 307
+ADIWS G+ L G PP + I + + S S KD V
Sbjct: 177 EKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPP--SLEGNKFSKPFKDFVSLC 234
Query: 308 LHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMK 347
L+ DPKER SA E+L H +++ S L I + + K
Sbjct: 235 LNKDPKERPSAKELLKHKFIKKAKKTSYLTLLIERIKKWK 274
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 126 bits (319), Expect = 3e-33
Identities = 76/272 (27%), Positives = 122/272 (44%), Gaps = 20/272 (7%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
+ Y +G G V Y ++ A K I K + V+++R+EVQ M
Sbjct: 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKC--QTSVDELRKEVQAMS-QCN 57
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFD---RIIAKGHYSERAAANLCRQMVTVVHY 183
H N+V+ ++ + L+M +GG L D +G E A + ++++ + Y
Sbjct: 58 HPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEY 117
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF-FKPGD----VFKDLVGSAYYVA 238
HS G +HRD+K N L ED +K DFG+S GD V K VG+ ++A
Sbjct: 118 LHSNGQIHRDIKAGNILL---GEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMA 174
Query: 239 PEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH---IDFSSDPW 293
PEV+ Y +ADIWS G+ L +G P+ + L+ ++ +D
Sbjct: 175 PEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYK 234
Query: 294 PNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
S S + ++ L DP +R +A E+L H
Sbjct: 235 K-YSKSFRKMISLCLQKDPSKRPTAEELLKHK 265
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Score = 127 bits (321), Expect = 5e-33
Identities = 83/257 (32%), Positives = 131/257 (50%), Gaps = 15/257 (5%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG LV K T + +A K + +I +D+V E +++ + T H + LK
Sbjct: 3 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALK 61
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
A++ + +M+ GGELF + + ++E A ++V+ + Y HS V++RD+
Sbjct: 62 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI 121
Query: 195 KPENFLFSSSAEDSPLKATDFGL-SVFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADI 252
K EN + +D +K TDFGL G K G+ Y+APEVL N YG D
Sbjct: 122 KLENLMLD---KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDW 178
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
W GV++Y ++ G PF+ + + +F+ IL I F +S AK ++ +L DP
Sbjct: 179 WGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDP 234
Query: 313 KERL-----SAAEVLNH 324
K+RL A EV+ H
Sbjct: 235 KQRLGGGPSDAKEVMEH 251
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323 |
| >gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Score = 127 bits (320), Expect = 9e-33
Identities = 74/260 (28%), Positives = 126/260 (48%), Gaps = 13/260 (5%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+G+G FG L HK + +A K + + ++ + + + + E ++ H +V L
Sbjct: 3 IGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLH 62
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
+++ + ++D GGELF + + + E A ++ + + Y HS+ +++RDL
Sbjct: 63 YSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDL 122
Query: 195 KPENFLFSSSAEDSPLKATDFGL-SVFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADI 252
KPEN L S + TDFGL + G+ Y+APEVLR+ Y D
Sbjct: 123 KPENILLDS---QGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDW 179
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
W G +LY +L G+PPF+ ++D IL + PNIS SA+ +++ +L D
Sbjct: 180 WCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLK----PNISVSARHLLEGLLQKDR 235
Query: 313 KERLSAA----EVLNHPWMR 328
+RL A E+ NH +
Sbjct: 236 TKRLGAKDDFLEIKNHVFFS 255
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323 |
| >gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Score = 125 bits (315), Expect = 2e-32
Identities = 82/262 (31%), Positives = 141/262 (53%), Gaps = 23/262 (8%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
++G G G+ + K + +Q A K + RK R E + EV IM H+N+VE+
Sbjct: 28 KIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRR---ELLFNEVVIMRDYQ-HQNVVEM 83
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRD 193
+Y + ++M+ GG L D I+++ +E A +C ++ + Y HS GV+HRD
Sbjct: 84 YKSYLVGEELWVLMEFLQGGALTD-IVSQTRLNEEQIATVCESVLQALCYLHSQGVIHRD 142
Query: 194 LKPENFLFSSSAEDSPLKATDFGL-SVFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEAD 251
+K ++ L + D +K +DFG + K K LVG+ Y++APEV+ R YG E D
Sbjct: 143 IKSDSILLTL---DGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVD 199
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK------DIVK 305
IWS G+++ ++ G PP++ ++ A+ R P P + ++ K D ++
Sbjct: 200 IWSLGIMVIEMVDGEPPYFSDSPVQ---AMKR----LRDSPPPKLKNAHKISPVLRDFLE 252
Query: 306 KMLHADPKERLSAAEVLNHPWM 327
+ML +P+ER +A E+L+HP++
Sbjct: 253 RMLTREPQERATAQELLDHPFL 274
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297 |
| >gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Score = 125 bits (316), Expect = 3e-32
Identities = 81/268 (30%), Positives = 140/268 (52%), Gaps = 18/268 (6%)
Query: 75 LGRGQFGVTYLV---THKDTKQQFACKSISSRKLINRDD-VEDVRREVQIMHHLTGHRNI 130
LG G +G +LV T DT + +A K + L+ + VE R E ++ H+ +
Sbjct: 8 LGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFL 67
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVM 190
V L A++ ++LI+D +GGE+F + + ++SE +++ + + H +G++
Sbjct: 68 VTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIV 127
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSVFF--KPGDVFKDLVGSAYYVAPEVLR--RNY 246
+RD+K EN L S + + TDFGLS F + + G+ Y+APE++R +
Sbjct: 128 YRDIKLENILLDS---EGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGH 184
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPN-ISSSAKDIVK 305
G D WS G++++ LL+G PF E E++ + R I P+P+ I A+D++
Sbjct: 185 GKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSR-RILKCDPPFPSFIGPEAQDLLH 243
Query: 306 KMLHADPKERLSAA-----EVLNHPWMR 328
K+L DPK+RL A E+ HP+ +
Sbjct: 244 KLLRKDPKKRLGAGPQGASEIKEHPFFK 271
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332 |
| >gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Score = 124 bits (313), Expect = 4e-32
Identities = 86/279 (30%), Positives = 144/279 (51%), Gaps = 17/279 (6%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
++G G G+ + T K T +Q A K + RK R E + EV IM H N+V++
Sbjct: 29 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRR---ELLFNEVVIMRDYH-HENVVDM 84
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRD 193
+Y + ++M+ GG L D I+ +E A +C ++ + Y H+ GV+HRD
Sbjct: 85 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRD 143
Query: 194 LKPENFLFSSSAEDSPLKATDFGL-SVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEAD 251
+K ++ L +S D +K +DFG + K K LVG+ Y++APEV+ R YG E D
Sbjct: 144 IKSDSILLTS---DGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVD 200
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
IWS G+++ ++ G PP++ E I R ++ +SS + + ML +
Sbjct: 201 IWSLGIMVIEMIDGEPPYFNEPPLQAMRRI-RDNLPPRVKDSHKVSSVLRGFLDLMLVRE 259
Query: 312 PKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFR 350
P +R +A E+L HP++++ G S ++ M+Q+R
Sbjct: 260 PSQRATAQELLQHPFLKLAGPPS------CIVPLMRQYR 292
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292 |
| >gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Score = 126 bits (317), Expect = 6e-32
Identities = 83/308 (26%), Positives = 133/308 (43%), Gaps = 61/308 (19%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G FG LV DT +A K++ ++ R+ V+ E I+ + +V+
Sbjct: 7 KTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAE-ADNEWVVK 65
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L +++D+ ++ +MD GG++ +I G + E A ++ + H MG +HR
Sbjct: 66 LYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHR 125
Query: 193 DLKPENFLFSSSAEDSPLKATDFGL---------SVFFKPGDVFK--------------- 228
D+KP+N L D +K TDFGL S +++ GD +
Sbjct: 126 DIKPDNILID---RDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDR 182
Query: 229 --------------------DLVGSAYYVAPEVL-RRNYGAEADIWSAGVILYILLSGVP 267
LVG+ Y+APEVL R Y D WS GVILY +L G P
Sbjct: 183 CRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQP 242
Query: 268 PFW----GETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERL---SAAE 320
PF ET+ + + HI +S A D++ + L ++RL A E
Sbjct: 243 PFLADTPAETQLKVINWETTLHI----PSQAKLSREASDLILR-LCCGAEDRLGKNGADE 297
Query: 321 VLNHPWMR 328
+ HP+ +
Sbjct: 298 IKAHPFFK 305
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376 |
| >gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 123 bits (310), Expect = 7e-32
Identities = 80/265 (30%), Positives = 125/265 (47%), Gaps = 26/265 (9%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+G G +G Y T + A K I KL DD E +++E+ ++ H NIV
Sbjct: 10 RIGSGTYGDVYKARDIATGELVAIKVI---KLEPGDDFEIIQQEISMLKECR-HPNIVAY 65
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRI-IAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
G+Y R + ++M+ C GG L D + +G SE A +CR+ + + Y H G +HR
Sbjct: 66 FGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHR 125
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVL----RRNYG 247
D+K N L + + +K DFG+S K +G+ Y++APEV + Y
Sbjct: 126 DIKGANILLTEDGD---VKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYD 182
Query: 248 AEADIWSAGVILYILLSGVPPFWG-ETEQSIFDAILRGHIDFSSDPWPNISSSAK----- 301
+ DIW+ G+ L PP + +++F I S+ P P + K
Sbjct: 183 GKCDIWALGITAIELAELQPPMFDLHPMRALF------LISKSNFPPPKLKDKEKWSPVF 236
Query: 302 -DIVKKMLHADPKERLSAAEVLNHP 325
D +KK L DPK+R +A ++L HP
Sbjct: 237 HDFIKKCLTKDPKKRPTATKLLQHP 261
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 122 bits (308), Expect = 1e-31
Identities = 78/261 (29%), Positives = 124/261 (47%), Gaps = 23/261 (8%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G +G Y HK+T Q A K + +D++++ +E+ I+ IV+
Sbjct: 11 LGEGSYGSVYKAIHKETGQVVAIKVVP-----VEEDLQEIIKEISILKQ-CDSPYIVKYY 64
Query: 135 GAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
G+Y + ++M+ C G + D +I K +E A + Q + + Y HS +HR
Sbjct: 65 GSYFKNTDLWIVMEYCGAGSVSDIMKITNK-TLTEEEIAAILYQTLKGLEYLHSNKKIHR 123
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD---LVGSAYYVAPEVLRR-NYGA 248
D+K N L + E+ K DFG+S + D ++G+ +++APEV++ Y
Sbjct: 124 DIKAGNILLN---EEGQAKLADFGVS--GQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNN 178
Query: 249 EADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP--WPNISSSAKDIVKK 306
+ADIWS G+ + G PP+ I SDP W S D VKK
Sbjct: 179 KADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKW---SPEFNDFVKK 235
Query: 307 MLHADPKERLSAAEVLNHPWM 327
L DP+ER SA ++L HP++
Sbjct: 236 CLVKDPEERPSAIQLLQHPFI 256
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|185504 PTZ00184, PTZ00184, calmodulin; Provisional | Back alignment and domain information |
|---|
Score = 118 bits (298), Expect = 1e-31
Identities = 62/148 (41%), Positives = 91/148 (61%), Gaps = 6/148 (4%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+A+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 423 NGTIDYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT 481
NGTID+ EF+T M + EE + +AF+ FD+D +G+I+ EL H + N+G+ T
Sbjct: 61 NGTIDFPEFLTLMARKMKDTDSEEEIKEAFKVFDRDGNGFISAAELRHVMT--NLGEKLT 118
Query: 482 ---IKEIIAEVDIDNDGRINYEEFAAMM 506
+ E+I E D+D DG+INYEEF MM
Sbjct: 119 DEEVDEMIREADVDGDGQINYEEFVKMM 146
|
Length = 149 |
| >gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 124 bits (312), Expect = 3e-31
Identities = 78/299 (26%), Positives = 134/299 (44%), Gaps = 52/299 (17%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+GRG FG LV KDT +A K + +++ ++ V VR E I+ + +V+L
Sbjct: 9 IGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAE-ADNPWVVKLY 67
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
+++D + + LIM+ GG++ ++ K ++E + + + H +G +HRD+
Sbjct: 68 YSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDI 127
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFK--------------PGDVFKDL---------- 230
KP+N L + +K +DFGL K F D
Sbjct: 128 KPDNLLLDAKGH---IKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRK 184
Query: 231 ---------------VGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETE 274
VG+ Y+APEV + Y E D WS GVI+Y +L G PPF +
Sbjct: 185 AETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNP 244
Query: 275 QSIFDAIL--RGHIDFSSDPWPNISSSAKDIVKKMLHADPKERL---SAAEVLNHPWMR 328
Q + I+ + + F + +S AKD++K++ + + RL E+ +HP+ +
Sbjct: 245 QETYRKIINWKETLQFPDE--VPLSPEAKDLIKRLC-CEAERRLGNNGVNEIKSHPFFK 300
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364 |
| >gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Score = 122 bits (306), Expect = 3e-31
Identities = 83/269 (30%), Positives = 141/269 (52%), Gaps = 19/269 (7%)
Query: 75 LGRGQFGVTYLV---THKDTKQQFACKSISSRKLINR-DDVEDVRREVQIMHHLTGHRNI 130
LG G +G +LV + D+ + +A K + ++ + E R E Q++ H+ +
Sbjct: 8 LGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL 67
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVM 190
V L A++ ++LI+D GGELF + + + E+ ++V + + H +G++
Sbjct: 68 VTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGII 127
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFK--DLVGSAYYVAPEVLRRNYGA 248
+RD+K EN L S + + TDFGLS F +V + G+ Y+AP+++R G
Sbjct: 128 YRDIKLENILLDS---NGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGG 184
Query: 249 E---ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP-NISSSAKDIV 304
D WS GV++Y LL+G PF + E++ I R I S P+P +S+ AKDI+
Sbjct: 185 HDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISR-RILKSEPPYPQEMSALAKDII 243
Query: 305 KKMLHADPKERL-----SAAEVLNHPWMR 328
+++L DPK+RL A E+ HP+ +
Sbjct: 244 QRLLMKDPKKRLGCGPSDADEIKKHPFFQ 272
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290 |
| >gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Score = 122 bits (308), Expect = 5e-31
Identities = 82/267 (30%), Positives = 131/267 (49%), Gaps = 25/267 (9%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH--HLTGHRNIVE 132
LGRG FG L +K T + +A K++ +I RD+VE + E +I + H +V
Sbjct: 7 LGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVN 66
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L ++ V +M+ AGG+L I +SE A +V + Y H +++R
Sbjct: 67 LFACFQTEDHVCFVMEYAAGGDLM-MHIHTDVFSEPRAVFYAACVVLGLQYLHENKIVYR 125
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD----LVGSAYYVAPEVL-RRNYG 247
DLK +N L + + +K DFGL K G F D G+ ++APEVL +Y
Sbjct: 126 DLKLDNLLLDT---EGFVKIADFGLC---KEGMGFGDRTSTFCGTPEFLAPEVLTETSYT 179
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP-NISSSAKDIVKK 306
D W GV++Y +L G PF G+ E+ +FD+I+ + +P +S A I+++
Sbjct: 180 RAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEV-----RYPRFLSREAISIMRR 234
Query: 307 MLHADPKERLSAAE-----VLNHPWMR 328
+L +P+ RL + E V P+ R
Sbjct: 235 LLRRNPERRLGSGEKDAEDVKKQPFFR 261
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324 |
| >gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 120 bits (302), Expect = 8e-31
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 29/269 (10%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDD------VEDVRREVQIMHHLT 125
G+ LG+G FG YL DT ++ A K + + D V + E+Q++ +L
Sbjct: 7 GKLLGQGAFGRVYLCYDVDTGRELAVKQVP----FDPDSPETKKEVNALECEIQLLKNLQ 62
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
H IV+ G D ++++ M+ GG + D++ A G +E RQ++ V Y H
Sbjct: 63 -HERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLH 121
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFG----LSVFFKPGDVFKDLVGSAYYVAPEV 241
S ++HRD+K N L S+ +K DFG L G K + G+ Y+++PEV
Sbjct: 122 SNMIVHRDIKGANILRDSAGN---VKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEV 178
Query: 242 LR-RNYGAEADIWSAGVILYILLSGVPPFWGETE--QSIFDAILRGHIDFSSDPW--PNI 296
+ YG +AD+WS G + +L+ PP W E E +IF + ++P ++
Sbjct: 179 ISGEGYGRKADVWSVGCTVVEMLTEKPP-WAEFEAMAAIFKIATQ-----PTNPQLPSHV 232
Query: 297 SSSAKDIVKKMLHADPKERLSAAEVLNHP 325
S A++ +++ + K+R SA E+L H
Sbjct: 233 SPDARNFLRRTFVENAKKRPSAEELLRHF 261
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263 |
| >gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 121 bits (304), Expect = 9e-31
Identities = 76/257 (29%), Positives = 125/257 (48%), Gaps = 13/257 (5%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+G+G FG V +DT++ +A K+I +++R +V E ++ + IV LK
Sbjct: 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVN-CPFIVPLK 59
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
+++ + L++ GGELF + +G + A +++ + H V++RDL
Sbjct: 60 FSFQSPEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDL 119
Query: 195 KPENFLFSSSAEDSPLKATDFGL-SVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEADI 252
KPEN L + DFGL + K D G+ Y+APE+L Y D
Sbjct: 120 KPENILLDYQGH---IALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDW 176
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
W+ GV+LY +L+G+PPF+ E ++ IL+ + F AKD++ +L DP
Sbjct: 177 WTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPD----GFDRDAKDLLIGLLSRDP 232
Query: 313 KERL---SAAEVLNHPW 326
RL A E+ NHP+
Sbjct: 233 TRRLGYNGAQEIKNHPF 249
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312 |
| >gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Score = 120 bits (303), Expect = 1e-30
Identities = 77/290 (26%), Positives = 125/290 (43%), Gaps = 53/290 (18%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR-DDVEDVR--REVQIMHHLTGHRNIV 131
+G G F + T + +A K + +E V RE+Q + L+ H NI+
Sbjct: 7 IGEGTFSEVLKAQSRKTGKYYAIK-----CMKKHFKSLEQVNNLREIQALRRLSPHPNIL 61
Query: 132 ELKGAYEDRH--SVNLIMDLCAGGELFDRIIAKGHY-SERAAANLCRQMVTVVHYCHSMG 188
L DR + L+ +L L++ I + E+ + Q++ + + H G
Sbjct: 62 RLIEVLFDRKTGRLALVFEL-MDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNG 120
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFG--LSVFFKPGDVFKDLVGSAYYVAPEVLRRN- 245
+ HRD+KPEN L +D LK DFG ++ KP + + + + +Y APE L +
Sbjct: 121 IFHRDIKPENILI----KDDILKLADFGSCRGIYSKPP--YTEYISTRWYRAPECLLTDG 174
Query: 246 -YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH---------IDFSSDPW-- 293
YG + DIW+ G + + +LS P F G E D I + H +
Sbjct: 175 YYGPKMDIWAVGCVFFEILSLFPLFPGTNE---LDQIAKIHDVLGTPDAEVLKKFRKSRH 231
Query: 294 -----------------PNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
PN S+ D++KK+L DP ER++A + L HP+
Sbjct: 232 MNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPY 281
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282 |
| >gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 121 bits (304), Expect = 2e-30
Identities = 81/263 (30%), Positives = 126/263 (47%), Gaps = 17/263 (6%)
Query: 71 FGRELGRGQFGVTYLVTHKDTK-QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN 129
F R LG G FG L T+K+ A K K+I + V+ V E +I++++ H
Sbjct: 34 FIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYIN-HPF 92
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGV 189
V L G+++D + L+++ GGE F + + Q+V + Y S+ +
Sbjct: 93 CVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNI 152
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGA 248
++RDLKPEN L +D +K TDFG + L G+ Y+APE+L +G
Sbjct: 153 VYRDLKPENLLLD---KDGFIKMTDFGFAKVVDTRTY--TLCGTPEYIAPEILLNVGHGK 207
Query: 249 EADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKML 308
AD W+ G+ +Y +L G PPF+ I+ IL G I F + ++ K ++KK+L
Sbjct: 208 AADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFPK----FLDNNCKHLMKKLL 263
Query: 309 HADPKERL-----SAAEVLNHPW 326
D +R A V HPW
Sbjct: 264 SHDLTKRYGNLKKGAQNVKEHPW 286
|
Length = 340 |
| >gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Score = 118 bits (296), Expect = 4e-30
Identities = 80/259 (30%), Positives = 130/259 (50%), Gaps = 15/259 (5%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y R +G G FG LV H ++ Q++A K I R + VED R+E ++ + H
Sbjct: 2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEI--RLPKSSSAVEDSRKEAVLLAKMK-HP 58
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRI-IAKGH-YSERAAANLCRQMVTVVHYCHS 186
NIV K ++E + ++M+ C GG+L +I + +G + E QM V + H
Sbjct: 59 NIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHE 118
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLRR- 244
V+HRD+K +N + ++ +K DFG + + PG VG+ YYV PE+
Sbjct: 119 KRVLHRDIKSKNIFLT---QNGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENM 175
Query: 245 NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP-NISSSAKDI 303
Y ++DIWS G ILY L + PF + +++ + +G S P P + S + +
Sbjct: 176 PYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQG----SYKPLPSHYSYELRSL 231
Query: 304 VKKMLHADPKERLSAAEVL 322
+K+M +P+ R SA +L
Sbjct: 232 IKQMFKRNPRSRPSATTIL 250
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255 |
| >gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Score = 119 bits (300), Expect = 4e-30
Identities = 82/258 (31%), Positives = 132/258 (51%), Gaps = 16/258 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG LV K T + +A K + ++ +D+V E +++ + + H + LK
Sbjct: 3 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTALK 61
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS-MGVMHRD 193
+++ + +M+ GGELF + + +SE A ++V+ + Y HS V++RD
Sbjct: 62 YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRD 121
Query: 194 LKPENFLFSSSAEDSPLKATDFGL-SVFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEAD 251
LK EN + +D +K TDFGL K G K G+ Y+APEVL N YG D
Sbjct: 122 LKLENLMLD---KDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVD 178
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W GV++Y ++ G PF+ + + +F+ IL I F +S AK ++ +L D
Sbjct: 179 WWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLSPEAKSLLSGLLKKD 234
Query: 312 PKERL-----SAAEVLNH 324
PK+RL A E++ H
Sbjct: 235 PKQRLGGGPDDAKEIMQH 252
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 117 bits (296), Expect = 5e-30
Identities = 72/258 (27%), Positives = 127/258 (49%), Gaps = 18/258 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G +G Y V Q +A K + + ++ + ED E++I+ + H NI+ K
Sbjct: 8 LGKGSYGSVYKVKRLSDNQFYALKEVDLGSM-SQKEREDAVNEIRILASVN-HPNIISYK 65
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGH-----YSERAAANLCRQMVTVVHYCHSMGV 189
A+ D + + ++M+ G+L + I+K E+ + Q++ + H +
Sbjct: 66 EAFLDGNKLCIVMEYAPFGDLS-KAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKI 124
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGA 248
+HRDLK N L ++ +K D G+S K ++ K +G+ +Y+APEV + R Y
Sbjct: 125 LHRDLKSANILLVANDL---VKIGDLGISKVLK-KNMAKTQIGTPHYMAPEVWKGRPYSY 180
Query: 249 EADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNI-SSSAKDIVKKM 307
++DIWS G +LY + + PPF + Q + + RG P P I S ++ ++ M
Sbjct: 181 KSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKY----PPIPPIYSQDLQNFIRSM 236
Query: 308 LHADPKERLSAAEVLNHP 325
L PK R + ++L P
Sbjct: 237 LQVKPKLRPNCDKILASP 254
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Score = 117 bits (295), Expect = 6e-30
Identities = 69/264 (26%), Positives = 143/264 (54%), Gaps = 14/264 (5%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y+ +++G G FG LV K+ +Q+ K I+ K+ ++ E+ R+EV ++ ++ H
Sbjct: 2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKER-EESRKEVAVLSNMK-HP 59
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KG-HYSERAAANLCRQMVTVVHYCHS 186
NIV+ + ++E+ ++ ++MD C GG+L+ +I A +G + E + Q+ + + H
Sbjct: 60 NIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHD 119
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLR-R 244
++HRD+K +N + +D +K DFG++ V ++ + +G+ YY++PE+ R
Sbjct: 120 RKILHRDIKSQNIFLT---KDGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENR 176
Query: 245 NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP-NISSSAKDI 303
Y ++DIW+ G +LY + + F +++ I+RG S P + S +++
Sbjct: 177 PYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRG----SYPPVSSHYSYDLRNL 232
Query: 304 VKKMLHADPKERLSAAEVLNHPWM 327
V ++ +P++R S +L ++
Sbjct: 233 VSQLFKRNPRDRPSVNSILEKNFI 256
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256 |
| >gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Score = 118 bits (296), Expect = 7e-30
Identities = 77/264 (29%), Positives = 126/264 (47%), Gaps = 12/264 (4%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
R LG+G FG + T + +ACK + +++ R E QI+ + + +V
Sbjct: 6 RVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNS-QFVVN 64
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVHYCHSMGVM 190
L AYE + ++ L++ + GG+L I G+ + E A +++ + H +
Sbjct: 65 LAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTV 124
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAE 249
+RDLKPEN L + ++ +D GL+V G+ + VG+ Y+APEVL + Y
Sbjct: 125 YRDLKPENILLD---DYGHIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQRYTLS 181
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309
D W G ++Y ++ G PF G E+ + + R ++ S AK I K +L
Sbjct: 182 PDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLLT 241
Query: 310 ADPKERL-----SAAEVLNHPWMR 328
DPK+RL A EV HP+ R
Sbjct: 242 KDPKQRLGCQEEGAGEVKRHPFFR 265
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285 |
| >gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Score = 118 bits (298), Expect = 8e-30
Identities = 72/256 (28%), Positives = 126/256 (49%), Gaps = 13/256 (5%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+G+G FG L HK ++ +A K + + ++ + + + + E ++ H +V L
Sbjct: 3 IGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLH 62
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
+++ + ++D GGELF + + + E A ++ + + Y HS+ +++RDL
Sbjct: 63 FSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDL 122
Query: 195 KPENFLFSSSAEDSPLKATDFGL-SVFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADI 252
KPEN L S + TDFGL + G+ Y+APEVL + Y D
Sbjct: 123 KPENILLDSQGH---IVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDW 179
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
W G +LY +L G+PPF+ ++D IL + PNI++SA+ +++ +L D
Sbjct: 180 WCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK----PNITNSARHLLEGLLQKDR 235
Query: 313 KERLSAA----EVLNH 324
+RL A E+ NH
Sbjct: 236 TKRLGAKDDFMEIKNH 251
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325 |
| >gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Score = 119 bits (298), Expect = 9e-30
Identities = 78/260 (30%), Positives = 131/260 (50%), Gaps = 15/260 (5%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG LV K + + +A K + +I +D+V E +++ + T H + LK
Sbjct: 3 LGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKN-TRHPFLTSLK 61
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
+++ + + +M+ GGELF + + +SE ++V+ + Y HS +++RDL
Sbjct: 62 YSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDL 121
Query: 195 KPENFLFSSSAEDSPLKATDFGL-SVFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADI 252
K EN + +D +K TDFGL K G+ Y+APEVL N YG D
Sbjct: 122 KLENLMLD---KDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGRAVDW 178
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
W GV++Y ++ G PF+ + + +F+ IL I F +S+ AK ++ +L DP
Sbjct: 179 WGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPR----TLSADAKSLLSGLLIKDP 234
Query: 313 KERL-----SAAEVLNHPWM 327
+RL A E++ H +
Sbjct: 235 NKRLGGGPDDAKEIMRHSFF 254
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328 |
| >gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Score = 118 bits (297), Expect = 1e-29
Identities = 75/261 (28%), Positives = 126/261 (48%), Gaps = 19/261 (7%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+G+G FG L K + +A K + + ++NR + + + E ++ H +V L
Sbjct: 3 IGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLH 62
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
+++ + ++D GGELF + + + E A ++ + + Y HS+ +++RDL
Sbjct: 63 YSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDL 122
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPG----DVFKDLVGSAYYVAPEVLRRN-YGAE 249
KPEN L S + TDFGL K G D G+ Y+APEV+R+ Y
Sbjct: 123 KPENILLDSQGH---VVLTDFGLC---KEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNT 176
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309
D W G +LY +L G+PPF+ ++D IL + P S +A I++++L
Sbjct: 177 VDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLR----PGASLTAWSILEELLE 232
Query: 310 ADPKERLSAA----EVLNHPW 326
D + RL A E+ HP+
Sbjct: 233 KDRQRRLGAKEDFLEIQEHPF 253
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 117 bits (294), Expect = 1e-29
Identities = 75/277 (27%), Positives = 132/277 (47%), Gaps = 25/277 (9%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN-------RDDVEDVRREVQIM 121
++ G +G+G +G YL + T + A K + I +D V+ +R E++ +
Sbjct: 3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETL 62
Query: 122 HHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVV 181
L H NIV+ G +++ ++ GG + + G + E+ Q++ +
Sbjct: 63 KDLD-HLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGL 121
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-----LVGSAYY 236
Y HS G++HRDLK +N L + D K +DFG+S K D++ + + GS ++
Sbjct: 122 AYLHSKGILHRDLKADNLLVDA---DGICKISDFGISK--KSDDIYDNDQNMSMQGSVFW 176
Query: 237 VAPEVL---RRNYGAEADIWSAGVILYILLSGVPPFWGETE--QSIFD-AILRGHIDFSS 290
+APEV+ + Y A+ DIWS G ++ + +G P W + E ++F R
Sbjct: 177 MAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRP-WSDEEAIAAMFKLGNKRSAPPIPP 235
Query: 291 DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
D N+S A D + +P R +A E+L HP++
Sbjct: 236 DVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 117 bits (294), Expect = 2e-29
Identities = 85/279 (30%), Positives = 138/279 (49%), Gaps = 15/279 (5%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
++G G G+ + T K + + A K + RK R E + EV IM H N+VE+
Sbjct: 27 KIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMRDYQ-HENVVEM 82
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRD 193
+Y + ++M+ GG L D I+ +E A +C ++ + H+ GV+HRD
Sbjct: 83 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRD 141
Query: 194 LKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEAD 251
+K ++ L + D +K +DFG K K LVG+ Y++APE++ R YG E D
Sbjct: 142 IKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVD 198
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
IWS G+++ ++ G PP++ E I R ++ +S S K + ++L D
Sbjct: 199 IWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPKLKNLHKVSPSLKGFLDRLLVRD 257
Query: 312 PKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFR 350
P +R +AAE+L HP++ G P I L R + R
Sbjct: 258 PAQRATAAELLKHPFLAKAG----PPSCIVPLMRQNRMR 292
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Score = 118 bits (297), Expect = 2e-29
Identities = 82/275 (29%), Positives = 132/275 (48%), Gaps = 25/275 (9%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
DV++ +GRG FG +V K T +A K + L+ ++ V E I+
Sbjct: 4 DVKSL------VGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILS- 56
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVH 182
++ I +L+ A++D+ ++ L+M+ GG+L + + + E A ++V +H
Sbjct: 57 ISNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIH 116
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDL-VGSAYYVAPE 240
H MG +HRD+KPEN L + +K DFG + V L VG+ Y+APE
Sbjct: 117 SVHQMGYVHRDIKPENVLIDRTGH---IKLADFGSAARLTANKMVNSKLPVGTPDYIAPE 173
Query: 241 VL-------RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL--RGHIDFSSD 291
VL + YG E D WS GVI Y ++ G PF T ++ I+ + + F D
Sbjct: 174 VLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPED 233
Query: 292 PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
P +SS D+++ +L KERL + HP+
Sbjct: 234 --PKVSSDFLDLIQSLL-CGQKERLGYEGLCCHPF 265
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 3e-29
Identities = 73/269 (27%), Positives = 127/269 (47%), Gaps = 17/269 (6%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSIS---SRKLINRDDVEDVRREVQIMHHLTGHR 128
G++LG G F Y T A K ++ + + VE +R+E+++M L H
Sbjct: 5 GQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLN-HP 63
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
+I+ + GA + NL ++ AGG + + G + E N Q++ + Y H
Sbjct: 64 HIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQ 123
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFG----LSVFFKPGDVFK-DLVGSAYYVAPEVLR 243
++HRD+K N L S+ + L+ DFG L+ F+ L+G+ ++APEVLR
Sbjct: 124 IIHRDVKGANLLIDSTGQR--LRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLR 181
Query: 244 -RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP---NISSS 299
YG D+WS G ++ + + PP W + S A++ I ++ ++S
Sbjct: 182 GEQYGRSCDVWSVGCVIIEMATAKPP-WNAEKHSNHLALIF-KIASATTAPSIPEHLSPG 239
Query: 300 AKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+D+ + L P++R + E+L HP R
Sbjct: 240 LRDVTLRCLELQPEDRPPSRELLKHPVFR 268
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Score = 116 bits (293), Expect = 4e-29
Identities = 80/259 (30%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG L K T + FA K++ ++ DDVE E +++ H + L
Sbjct: 3 LGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLF 62
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
++ + + +M+ GG+L I + G + E A +++ + + H G+++RDL
Sbjct: 63 CTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDL 122
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEVLR-RNYGAEADI 252
K +N L +D +K DFG+ G+ G+ Y+APE+L+ + Y D
Sbjct: 123 KLDNVLLD---KDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKYNESVDW 179
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPW-PN-ISSSAKDIVKKMLHA 310
WS GV+LY +L G PF GE E +FD+IL + P P IS AKD + K+
Sbjct: 180 WSFGVLLYEMLIGQSPFHGEDEDELFDSIL------NDRPHFPRWISKEAKDCLSKLFER 233
Query: 311 DPKERL-SAAEVLNHPWMR 328
DP +RL ++ HP+ R
Sbjct: 234 DPTKRLGVDGDIRQHPFFR 252
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316 |
| >gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Score = 116 bits (292), Expect = 6e-29
Identities = 72/263 (27%), Positives = 125/263 (47%), Gaps = 18/263 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG L K T + +A K + +I DDVE E +++ + +L
Sbjct: 8 LGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLH 67
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
++ + +M+ GG+L I G + E A ++ + + HS G+++RDL
Sbjct: 68 SCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDL 127
Query: 195 KPENFLFSSSAEDSPLKATDFGL---SVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEA 250
K +N + + +K DFG+ ++F G + G+ Y+APE + + YG
Sbjct: 128 KLDNVMLDAEGH---IKIADFGMCKENIF--GGKTTRTFCGTPDYIAPEIIAYQPYGKSV 182
Query: 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310
D W+ GV+LY +L+G PPF GE E +F +I+ ++ + ++S A I K +L
Sbjct: 183 DWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK----SLSKEAVSICKGLLTK 238
Query: 311 DPKERLSAA-----EVLNHPWMR 328
P +RL ++ H + R
Sbjct: 239 HPAKRLGCGPTGERDIREHAFFR 261
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324 |
| >gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Score = 116 bits (292), Expect = 6e-29
Identities = 94/313 (30%), Positives = 142/313 (45%), Gaps = 55/313 (17%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSI----SSRKLINRDDVEDVRREVQ 119
++ N Y+ + +G G FG+ + T Q A K I S+ L R RE++
Sbjct: 7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKR-----TYRELK 61
Query: 120 IMHHLTGHRNIVELKGAY----EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR 175
++ HL H NI+ L + ED + V ++ G R++ ++
Sbjct: 62 LLKHLR-HENIISLSDIFISPLEDIYFVTELL-----GTDLHRLLTSRPLEKQFIQYFLY 115
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY 235
Q++ + Y HS GV+HRDLKP N L + E+ LK DFGL+ P V + Y
Sbjct: 116 QILRGLKYVHSAGVVHRDLKPSNILIN---ENCDLKICDFGLARIQDPQ--MTGYVSTRY 170
Query: 236 YVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL----------- 282
Y APE++ + Y E DIWSAG I +L G P F G+ + F I
Sbjct: 171 YRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVI 230
Query: 283 -----------------RGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
R + FS + N SA D+++KML DP++R+SAAE L HP
Sbjct: 231 NTICSENTLRFVQSLPKREPVPFSEK-FKNADPSAIDLLEKMLVFDPQKRISAAEALAHP 289
Query: 326 WMRVDGDASDKPL 338
++ D +D+P+
Sbjct: 290 YLAPYHDPTDEPV 302
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 114 bits (286), Expect = 9e-29
Identities = 62/261 (23%), Positives = 120/261 (45%), Gaps = 12/261 (4%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ ++G+G FGV + V K K+ +A K I K+ NR + E+ E +++ L
Sbjct: 2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKM-NRREREEAIDEARVLAKLD-SS 59
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA--KGHYSERAAANLCRQMVTVVHYCHS 186
I+ ++ D+ +N++M+ G+L + E Q++ + + HS
Sbjct: 60 YIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHS 119
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF-KDLVGSAYYVAPEVLR-R 244
++HRD+K N +K D G++ F +VG+ YY++PE+ +
Sbjct: 120 KKILHRDIKSLNLFLD---AYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDK 176
Query: 245 NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
Y ++D+W+ GV+LY +G PF + ++ I+RG S + S ++
Sbjct: 177 PYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVSQMY---SQQLAQLI 233
Query: 305 KKMLHADPKERLSAAEVLNHP 325
+ L D ++R ++L +P
Sbjct: 234 DQCLTKDYRQRPDTFQLLRNP 254
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Score = 115 bits (289), Expect = 1e-28
Identities = 71/256 (27%), Positives = 121/256 (47%), Gaps = 13/256 (5%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+G+G FG L K +A K + + ++ + + + E ++ H +V L
Sbjct: 3 IGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLH 62
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
+++ + ++D GGELF + + + E A ++ + + Y HS+ +++RDL
Sbjct: 63 YSFQTAEKLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDL 122
Query: 195 KPENFLFSSSAEDSPLKATDFGL-SVFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADI 252
KPEN L S + TDFGL +P + G+ Y+APEVLR+ Y D
Sbjct: 123 KPENILLDSQGH---VVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDW 179
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
W G +LY +L G+PPF+ ++D IL + + +A D++ +LH D
Sbjct: 180 WCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLP----GGKTVAACDLLVGLLHKDQ 235
Query: 313 KERLSAA----EVLNH 324
+ RL A E+ NH
Sbjct: 236 RRRLGAKADFLEIKNH 251
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 113 bits (286), Expect = 1e-28
Identities = 67/274 (24%), Positives = 117/274 (42%), Gaps = 44/274 (16%)
Query: 71 FGRELGRGQFGV----TYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
G++LG G FG K + A K++ + +E+ RE +IM L
Sbjct: 3 LGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDA--SEQQIEEFLREARIMRKL-D 59
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHY-SERAAANLCRQ----MVTVV 181
H N+V+L G + + ++M+ GG+L + S + Q M
Sbjct: 60 HPNVVKLLGVCTEEEPLYIVMEYMEGGDLLSYLRKNRPKLSLSDLLSFALQIARGME--- 116
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV---- 237
Y S +HRDL N L E+ +K +DFGLS +DL YY
Sbjct: 117 -YLESKNFIHRDLAARNCLVG---ENLVVKISDFGLS---------RDLYDDDYYRKRGG 163
Query: 238 -------APEVLRRN-YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDF 288
APE L+ + +++D+WS GV+L+ + + G P+ G + + + + + G+
Sbjct: 164 KLPIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLEYLKNGYR-- 221
Query: 289 SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVL 322
PN D++ + DP++R + +E++
Sbjct: 222 -LPQPPNCPPELYDLMLQCWAEDPEDRPTFSELV 254
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Score = 114 bits (287), Expect = 2e-28
Identities = 81/298 (27%), Positives = 134/298 (44%), Gaps = 21/298 (7%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
RE+G G FG Y T + A K +S + + +D+ +EV+ + L H N +E
Sbjct: 21 REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLR-HPNTIE 79
Query: 133 LKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVM 190
KG Y H+ L+M+ C G ++ + + K E A +C + + Y HS +
Sbjct: 80 YKGCYLREHTAWLVMEYCLGSASDILE--VHKKPLQEVEIAAICHGALQGLAYLHSHERI 137
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL----RRNY 246
HRD+K N L + E +K DFG + P + F VG+ Y++APEV+ Y
Sbjct: 138 HRDIKAGNILLT---EPGTVKLADFGSASLVSPANSF---VGTPYWMAPEVILAMDEGQY 191
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI-DFSSDPWPNISSSAKDIVK 305
+ D+WS G+ L PP + S I + SS+ W S ++ V
Sbjct: 192 DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSNDW---SDYFRNFVD 248
Query: 306 KMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVI 363
L P++R S+ E+L H ++ + +D+ T+ R ++ L+ +K I
Sbjct: 249 SCLQKIPQDRPSSEELLKHRFVLRE-RPPTVIIDLIQRTK-DAVRELDNLQYRKMKKI 304
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307 |
| >gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Score = 114 bits (287), Expect = 3e-28
Identities = 74/264 (28%), Positives = 124/264 (46%), Gaps = 15/264 (5%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
R LG+G FG L K++ + +A K + ++ DDVE E +I+ H + +
Sbjct: 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQ 60
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L ++ + +M+ GG+L I + E A ++ + + + H G+++R
Sbjct: 61 LYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYR 120
Query: 193 DLKPENFLFSSSAEDSPLKATDFGL-SVFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEA 250
DLK +N L + K DFG+ G G+ Y+APE+L+ YG
Sbjct: 121 DLKLDNVLLD---HEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSV 177
Query: 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310
D W+ GV+LY +L G PF E E +F+AIL + + + W +S A DI+K +
Sbjct: 178 DWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT--W--LSQDAVDILKAFMTK 233
Query: 311 DPKERLSAAE------VLNHPWMR 328
+P RL + +L HP+ +
Sbjct: 234 NPTMRLGSLTLGGEEAILRHPFFK 257
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320 |
| >gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Score = 114 bits (288), Expect = 3e-28
Identities = 85/319 (26%), Positives = 142/319 (44%), Gaps = 63/319 (19%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQ--FACKSIS---SRKLINRDDVEDVRREVQIMHH 123
Y +ELG+G +G+ + +T ++ A K I+ S+K++ + + RE++++ H
Sbjct: 2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRAL----RELKLLRH 57
Query: 124 LTGHRNIVEL-------KGAYEDRHSVNLIM--DLCAGGELFDRIIAKGH-YSERAAANL 173
GH+NI L G + + + +M DL II G ++ +
Sbjct: 58 FRGHKNITCLYDMDIVFPGNFNELYLYEELMEADLHQ-------IIRSGQPLTDAHFQSF 110
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV-----FK 228
Q++ + Y HS V+HRDLKP N L ++ E LK DFGL+ F
Sbjct: 111 IYQILCGLKYIHSANVLHRDLKPGNLLVNADCE---LKICDFGLARGFSENPGENAGFMT 167
Query: 229 DLVGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR--- 283
+ V + +Y APE++ ++Y D+WS G IL LL P F G+ + IL+
Sbjct: 168 EYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLG 227
Query: 284 ----------------------GHIDFSSDPW--PNISSSAKDIVKKMLHADPKERLSAA 319
+I PN + A D+++K+L DP +R+S
Sbjct: 228 TPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVE 287
Query: 320 EVLNHPWMRVDGDASDKPL 338
E L HP++ + D D+P+
Sbjct: 288 EALEHPYLAIWHDPDDEPV 306
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 114 bits (286), Expect = 3e-28
Identities = 83/264 (31%), Positives = 133/264 (50%), Gaps = 23/264 (8%)
Query: 75 LGRGQFGVTYLV---THKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
LG+G FG +LV T D Q +A K + L RD V + E I+ + H IV
Sbjct: 4 LGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVR-TKMERDILAEV-NHPFIV 61
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
+L A++ + LI+D GG+LF R+ + ++E ++ + + HS+G+++
Sbjct: 62 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIY 121
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFK---DLVGSAYYVAPEVL-RRNYG 247
RDLKPEN L E+ +K TDFGLS + D K G+ Y+APEV+ RR +
Sbjct: 122 RDLKPENILLD---EEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRRGHT 176
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKM 307
AD WS GV+++ +L+G PF G+ + IL+ + +S A+ +++ +
Sbjct: 177 QSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQSLLRAL 232
Query: 308 LHADPKERLSAA-----EVLNHPW 326
+P RL A E+ HP+
Sbjct: 233 FKRNPANRLGAGPDGVEEIKRHPF 256
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Score = 112 bits (281), Expect = 5e-28
Identities = 76/268 (28%), Positives = 129/268 (48%), Gaps = 18/268 (6%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKL--INRDDVEDVRREVQIMHHLTG 126
YI + LG+G FG YLV K + K + + +N ++ +E Q++ L
Sbjct: 2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLD- 60
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAAN-----LCRQMVTVV 181
H IV+ ++ +R + +I + C G +L ++ H + + N Q++ V
Sbjct: 61 HPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFI-QLLLGV 119
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG-DVFKDLVGSAYYVAPE 240
HY H ++HRDLK +N ++ LK DFG+S D+ G+ YY++PE
Sbjct: 120 HYMHQRRILHRDLKAKNIFLKNNL----LKIGDFGVSRLLMGSCDLATTFTGTPYYMSPE 175
Query: 241 VLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299
L+ + Y +++DIWS G ILY + F G+ S+ I+ G + +
Sbjct: 176 ALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSLPETYS---RQ 232
Query: 300 AKDIVKKMLHADPKERLSAAEVLNHPWM 327
I++ ML+ DP R SAAE+L +P++
Sbjct: 233 LNSIMQSMLNKDPSLRPSAAEILRNPFI 260
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 112 bits (281), Expect = 5e-28
Identities = 73/263 (27%), Positives = 127/263 (48%), Gaps = 16/263 (6%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
YI R LG+G FG L + K ++ +L ++ D E+ I+ L H
Sbjct: 2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKE-RRDALNEIVILSLLQ-HP 59
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRII--AKGHYSERAAANLCRQMVTVVHYCHS 186
NI+ + D +++ + M+ GG L+D+I+ + E Q+V+ V Y H
Sbjct: 60 NIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHK 119
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF---KDLVGSAYYVAPEVLR 243
G++HRD+K N + + +K DFG+S G + + +VG+ YY++PE+ +
Sbjct: 120 AGILHRDIKTLNIFLT---KAGLIKLGDFGISK--ILGSEYSMAETVVGTPYYMSPELCQ 174
Query: 244 -RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302
Y ++DIW+ G +LY LL+ F ++ I++G+ + SS
Sbjct: 175 GVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVVSVY---SSELIS 231
Query: 303 IVKKMLHADPKERLSAAEVLNHP 325
+V +L DP++R +A EVL+ P
Sbjct: 232 LVHSLLQQDPEKRPTADEVLDQP 254
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Score = 114 bits (285), Expect = 5e-28
Identities = 80/283 (28%), Positives = 138/283 (48%), Gaps = 27/283 (9%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRD-DVEDVRREVQIMHHLTGHRNIV 131
R +GRG + LV K T++ +A K + ++L+N D D++ V+ E + + H +V
Sbjct: 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVK-KELVNDDEDIDWVQTEKHVFEQASNHPFLV 59
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
L ++ + +++ GG+L + + E A ++ ++Y H G+++
Sbjct: 60 GLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIY 119
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGL-SVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAE 249
RDLK +N L S +K TD+G+ +PGD G+ Y+APE+LR +YG
Sbjct: 120 RDLKLDNVLLDSEGH---IKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFS 176
Query: 250 ADIWSAGVILYILLSGVPPF---------WGETEQSIFDAILRGHIDFSSDPWPNISSSA 300
D W+ GV+++ +++G PF TE +F IL I ++S A
Sbjct: 177 VDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLSVKA 232
Query: 301 KDIVKKMLHADPKERLSA------AEVLNHPWMR-VDGDASDK 336
++K L+ DPKERL A++ HP+ R VD D ++
Sbjct: 233 ASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDLMEQ 275
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329 |
| >gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 7e-28
Identities = 88/287 (30%), Positives = 138/287 (48%), Gaps = 46/287 (16%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
ELG G FG Y +K+T A K I ++ + +++ED E++I+ H IV+L
Sbjct: 19 ELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYMVEIEILAT-CNHPYIVKL 74
Query: 134 KGAYEDRHSVNLIMDLCAGGEL------FDRIIAKGHYSERAAANLCRQMVTVVHYCHSM 187
GA+ + ++++ C GG + DR + +E +CRQM+ + Y HSM
Sbjct: 75 LGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGL-----TEPQIQVICRQMLEALQYLHSM 129
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSV----FFKPGDVFKDLVGSAYYVAPEVLR 243
++HRDLK N L + D +K DFG+S + D F +G+ Y++APEV+
Sbjct: 130 KIIHRDLKAGNVLLT---LDGDIKLADFGVSAKNVKTLQRRDSF---IGTPYWMAPEVVM 183
Query: 244 ------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
Y +ADIWS G+ L + PP + I + S+P P +S
Sbjct: 184 CETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAK------SEP-PTLS 236
Query: 298 SSAK------DIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338
+K D +K L P+ R SAA++L HP+ V S++PL
Sbjct: 237 QPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPF--VSSVTSNRPL 281
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 9e-28
Identities = 70/280 (25%), Positives = 120/280 (42%), Gaps = 51/280 (18%)
Query: 70 IFGRELGRGQFGV----TYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
G++LG G FG T + + A K++ + +E+ RE +IM L
Sbjct: 2 TLGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDA--SEQQIEEFLREARIMRKL- 58
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHY--SERAAANLCRQ----MVT 179
H NIV+L G + + ++M+ GG+L D + S + Q M
Sbjct: 59 DHPNIVKLLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGME- 117
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV-- 237
Y S +HRDL N L E+ +K +DFGLS +DL YY
Sbjct: 118 ---YLESKNFIHRDLAARNCLVG---ENLVVKISDFGLS---------RDLYDDDYYKVK 162
Query: 238 ---------APEVLRRN-YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHI 286
APE L+ + +++D+WS GV+L+ + + G P+ G + + + + +G+
Sbjct: 163 GGKLPIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEEPYPGMSNAEVLEYLKKGYR 222
Query: 287 DFSSDPWPNISSSAKDIVKKML---HADPKERLSAAEVLN 323
P + ++ K ML DP++R + +E++
Sbjct: 223 L------PKPPNCPPELYKLMLQCWAEDPEDRPTFSELVE 256
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 9e-28
Identities = 76/270 (28%), Positives = 117/270 (43%), Gaps = 23/270 (8%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQF-ACKSISSRKLINRDD-------VEDVRREVQ 119
Y LG G FG Y V K+ Q A K I+ D + D+ EV
Sbjct: 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVT 60
Query: 120 IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA----KGHYSERAAANLCR 175
I+ H NIV + + + ++MDL G L + + K ++E N+
Sbjct: 61 IIKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFV 120
Query: 176 QMVTVVHYCH-SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSA 234
QMV + Y H ++HRDL P N + ED + TDFGL+ +P +VG+
Sbjct: 121 QMVLALRYLHKEKRIVHRDLTPNNIMLG---EDDKVTITDFGLAKQKQPESKLTSVVGTI 177
Query: 235 YYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPW 293
Y PE+++ YG +AD+W+ G ILY + + PPF+ S+ I ++ +P
Sbjct: 178 LYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKI----VEAVYEPL 233
Query: 294 PN--ISSSAKDIVKKMLHADPKERLSAAEV 321
P S D++ L D + R +V
Sbjct: 234 PEGMYSEDVTDVITSCLTPDAEARPDIIQV 263
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 1e-27
Identities = 82/273 (30%), Positives = 139/273 (50%), Gaps = 21/273 (7%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSI------SSRKLINRDDVEDVRREVQIMH 122
+I G +G G FG YL + + + A K + +S K R ++ + RE+ ++
Sbjct: 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLK 61
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVH 182
L H NIV+ G+ D +N+ ++ GG + + G + E N RQ++ ++
Sbjct: 62 ELQ-HENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLN 120
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-------VFFKPGDVFKDLVGSAY 235
Y H+ G++HRD+K N L + +K +DFG+S + K L GS +
Sbjct: 121 YLHNRGIIHRDIKGANILVDNKGG---IKISDFGISKKLEANSLSTKTNGARPSLQGSVF 177
Query: 236 YVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP 294
++APEV+++ Y +ADIWS G ++ +L+G PF T+ AI + + S +
Sbjct: 178 WMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ---LQAIFKIGENASPEIPS 234
Query: 295 NISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
NISS A D ++K D +R +AAE+L HP++
Sbjct: 235 NISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 2e-27
Identities = 75/283 (26%), Positives = 122/283 (43%), Gaps = 37/283 (13%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
+ +G G +G Y HK T Q A K + + D+ E+++ E I+ +
Sbjct: 6 GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE----DEEEEIKEEYNILRKYSN 61
Query: 127 HRNIVELKGAYEDRHSVN------LIMDLCAGG---ELFDRIIAKGH-YSERAAANLCRQ 176
H NI GA+ ++ L+M+LC GG +L + KG E A + R+
Sbjct: 62 HPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRE 121
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAY 235
+ + Y H V+HRD+K +N L + +AE +K DFG+S ++ +G+ Y
Sbjct: 122 TLRGLAYLHENKVIHRDIKGQNILLTKNAE---VKLVDFGVSAQLDSTLGRRNTFIGTPY 178
Query: 236 YVAPEV------LRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
++APEV +Y A +D+WS G+ L G PP I R
Sbjct: 179 WMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRN----- 233
Query: 290 SDPWPNISSSAK------DIVKKMLHADPKERLSAAEVLNHPW 326
P P + S D + + L + ++R E+L HP+
Sbjct: 234 --PPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPF 274
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275 |
| >gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 2e-27
Identities = 69/266 (25%), Positives = 131/266 (49%), Gaps = 16/266 (6%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
+ +++G+GQF V Y + A K + ++++ +D +E+ ++ L
Sbjct: 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD- 60
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-----KGHYSERAAANLCRQMVTVV 181
H N+++ ++ + + +N++++L G+L R+I K ER Q+ + +
Sbjct: 61 HPNVIKYLASFIENNELNIVLELADAGDL-SRMIKHFKKQKRLIPERTIWKYFVQLCSAL 119
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFK-DLVGSAYYVAPE 240
+ HS +MHRD+KP N ++ +K D GL FF LVG+ YY++PE
Sbjct: 120 EHMHSKRIMHRDIKPANVFITA---TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPE 176
Query: 241 VLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQ--SIFDAILRGHIDFSSDPWPNIS 297
+ N Y ++DIWS G +LY + + PF+G+ S+ I + D+ P + S
Sbjct: 177 RIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKC--DYPPLPADHYS 234
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLN 323
+D+V + ++ DP++R + VL
Sbjct: 235 EELRDLVSRCINPDPEKRPDISYVLQ 260
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 2e-27
Identities = 70/263 (26%), Positives = 122/263 (46%), Gaps = 16/263 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG L K T + +A K + ++ DDV+ E +I+ H + L
Sbjct: 3 LGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALH 62
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
++ + + +M+ GG+L +I + E + ++ + + H GV++RDL
Sbjct: 63 CCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDL 122
Query: 195 KPENFLFSSSAEDSPLKATDFGL-SVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADI 252
K +N L + + K DFG+ G G+ Y+APE+L+ YG D
Sbjct: 123 KLDNILLDA---EGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGPSVDW 179
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
W+ GV++Y +++G PPF + E +F++IL H D W +S A I+K + +P
Sbjct: 180 WALGVLMYEMMAGQPPFEADNEDDLFESIL--HDDVLYPVW--LSKEAVSILKAFMTKNP 235
Query: 313 KERLSAA-------EVLNHPWMR 328
+RL + HP+ +
Sbjct: 236 NKRLGCVASQGGEDAIKQHPFFK 258
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321 |
| >gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Score = 113 bits (283), Expect = 3e-27
Identities = 87/315 (27%), Positives = 136/315 (43%), Gaps = 57/315 (18%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG L DTK +A K++ + ++ R+ V V+ E I+ + +V
Sbjct: 7 KTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAE-ADNEWVVR 65
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L +++D+ ++ +MD GG++ +I G + E A ++ V H MG +HR
Sbjct: 66 LYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHR 125
Query: 193 DLKPENFLFSSSAEDSPLKATDFGL---------SVFFKPGDVFK--------------- 228
D+KP+N L D +K TDFGL S +++ GD +
Sbjct: 126 DIKPDNILID---RDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPAN 182
Query: 229 ------------------------DLVGSAYYVAPEV-LRRNYGAEADIWSAGVILYILL 263
LVG+ Y+APEV LR Y D WS GVILY +L
Sbjct: 183 CRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 242
Query: 264 SGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERL---SAAE 320
G PPF +T ++ P +S A D++ K+ P++RL A E
Sbjct: 243 VGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLCRG-PEDRLGKNGADE 301
Query: 321 VLNHPWMRVDGDASD 335
+ HP+ + +SD
Sbjct: 302 IKAHPFFKTIDFSSD 316
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382 |
| >gnl|CDD|227455 COG5126, FRQ1, Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] | Back alignment and domain information |
|---|
Score = 107 bits (268), Expect = 3e-27
Identities = 58/145 (40%), Positives = 90/145 (62%), Gaps = 7/145 (4%)
Query: 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGT 425
L+EE+I LKE F+ D D+ G I EL L LG SE+E+ +L E D GN T
Sbjct: 13 QLTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEID-AGNET 71
Query: 426 IDYIEFITA-TMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT--- 481
+D+ EF+T ++ + R ++EE L +AF+ FDKD+ GYI++ EL LK ++G+ +
Sbjct: 72 VDFPEFLTVMSVKLKRGDKEEELREAFKLFDKDHDGYISIGELRRVLK--SLGERLSDEE 129
Query: 482 IKEIIAEVDIDNDGRINYEEFAAMM 506
+++++ E D D DG I+YEEF ++
Sbjct: 130 VEKLLKEYDEDGDGEIDYEEFKKLI 154
|
Length = 160 |
| >gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Score = 109 bits (275), Expect = 3e-27
Identities = 65/256 (25%), Positives = 122/256 (47%), Gaps = 10/256 (3%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
R +GRG FG+ +L K ++ K I ++ +D+ + E Q++ L+ H NI+E
Sbjct: 6 RVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQM-TKDERLAAQNECQVLKLLS-HPNIIE 63
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVHYCHSMGVM 190
+ + ++ ++M+ GG L + I + + E + Q++ +H+ H+ ++
Sbjct: 64 YYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLIL 123
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAE 249
HRDLK +N L +K DFG+S +VG+ Y++PE+ + Y +
Sbjct: 124 HRDLKTQNILLDK--HKMVVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKPYNQK 181
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309
+DIW+ G +LY L S F ++ I+ G SD S + ++ ML+
Sbjct: 182 SDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPISD---RYSPDLRQLILSMLN 238
Query: 310 ADPKERLSAAEVLNHP 325
DP +R ++++ P
Sbjct: 239 LDPSKRPQLSQIMAQP 254
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 4e-27
Identities = 82/290 (28%), Positives = 140/290 (48%), Gaps = 12/290 (4%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
D + Y ++G+G G + T Q+ A K I+ +K + E + E+ +M
Sbjct: 16 DPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKK---ELIINEILVMKE 72
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHY 183
L + NIV ++ + ++M+ AGG L D ++ + E A +CR+ + + +
Sbjct: 73 LK-NPNIVNFLDSFLVGDELFVVMEYLAGGSLTD-VVTETCMDEAQIAAVCRECLQALEF 130
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEVL 242
H+ V+HRD+K +N L D +K TDFG P + +VG+ Y++APEV+
Sbjct: 131 LHANQVIHRDIKSDNVLLGM---DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 187
Query: 243 -RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
R+ YG + DIWS G++ ++ G PP+ E I +P +S +
Sbjct: 188 TRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSPIFR 246
Query: 302 DIVKKMLHADPKERLSAAEVLNHPWMRVDGDASD-KPLDIAVLTRMKQFR 350
D + + L D ++R SA E+L HP++++ S PL +A MK R
Sbjct: 247 DFLNRCLEMDVEKRGSAKELLQHPFLKLAKPLSSLTPLILAAKEAMKSNR 296
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 4e-27
Identities = 80/289 (27%), Positives = 134/289 (46%), Gaps = 47/289 (16%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR----REVQIMHHLTGHRNI 130
+G G +GV + +++T Q A K K + +D ++ RE++++ L H N+
Sbjct: 9 IGEGSYGVVFKCRNRETGQIVAIK-----KFVESEDDPVIKKIALREIRMLKQLK-HPNL 62
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH-YSERAAANLCRQMVTVVHYCHSMGV 189
V L + + ++L+ + C + + + E + Q + V++CH
Sbjct: 63 VNLIEVFRRKRKLHLVFEYC-DHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNC 121
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLVGSAYYVAPEVL--RRNY 246
+HRD+KPEN L + + +K DFG + PGD + D V + +Y APE+L Y
Sbjct: 122 IHRDVKPENILITKQGQ---IKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQY 178
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETE--------QSIFDAILRGHID-FSS------- 290
G D+W+ G + LL+G P + G+++ +++ D I R H FS+
Sbjct: 179 GPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPR-HQQIFSTNQFFKGL 237
Query: 291 ------------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
+PNISS A +K L DP ERLS E+L HP+
Sbjct: 238 SIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286 |
| >gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 4e-27
Identities = 79/268 (29%), Positives = 132/268 (49%), Gaps = 18/268 (6%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSIS--SRKLINRDDVEDVRREVQIMHHLTGHRN 129
G+ LG+G FG YL DT ++ A K + +V + E+Q++ +L H
Sbjct: 7 GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQ-HER 65
Query: 130 IVELKGAYEDR--HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM 187
IV+ G DR ++ + M+ GG + D++ A G +E RQ++ + Y HS
Sbjct: 66 IVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSN 125
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFG----LSVFFKPGDVFKDLVGSAYYVAPEVLR 243
++HRD+K N L S+ +K DFG L G + + G+ Y+++PEV+
Sbjct: 126 MIVHRDIKGANILRDSAGN---VKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVIS 182
Query: 244 -RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPN-ISSSAK 301
YG +AD+WS G + +L+ PP W E E AI + ++ P+ IS A+
Sbjct: 183 GEGYGRKADVWSLGCTVVEMLTEKPP-WAEYEA--MAAIFKIATQPTNPQLPSHISEHAR 239
Query: 302 DIVKKMLHADPKERLSAAEVLNHPWMRV 329
D + + + + R SA E+L HP+ ++
Sbjct: 240 DFLGCIF-VEARHRPSAEELLRHPFAQL 266
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266 |
| >gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 5e-27
Identities = 80/267 (29%), Positives = 131/267 (49%), Gaps = 24/267 (8%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSI--SSRKLINRDDVEDVRREVQIMHHLTGHR 128
G+ LG+G FG YL DT ++ A K + +V + E+Q++ +L H
Sbjct: 6 LGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLL-HE 64
Query: 129 NIVELKGAYED--RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
IV+ G D ++++ M+ GG + D++ + G +E RQ++ V Y HS
Sbjct: 65 RIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHS 124
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK----PGDVFKDLVGSAYYVAPEVL 242
++HRD+K N L S +K DFG S + G K + G+ Y+++PEV+
Sbjct: 125 NMIVHRDIKGANILRDSVGN---VKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVI 181
Query: 243 R-RNYGAEADIWSAGVILYILLSGVPPFWGETE--QSIFDAILRGHIDFSSDPW--PNIS 297
YG +ADIWS G + +L+ PP W E E +IF + ++P P++S
Sbjct: 182 SGEGYGRKADIWSVGCTVVEMLTEKPP-WAEFEAMAAIFKIATQ-----PTNPVLPPHVS 235
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNH 324
+D +K++ + K R SA E+L H
Sbjct: 236 DHCRDFLKRIF-VEAKLRPSADELLRH 261
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265 |
| >gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 5e-27
Identities = 86/310 (27%), Positives = 141/310 (45%), Gaps = 47/310 (15%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+GRG FG LV KDT +A K + ++ ++ V +R E I+ G +V++
Sbjct: 9 IGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAW-VVKMF 67
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
+++D+ ++ LIM+ GG++ ++ K SE A + V + H +G +HRD+
Sbjct: 68 YSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDI 127
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFK---------------PGDV-FKDL-------- 230
KP+N L + +K +DFGL K P D F+++
Sbjct: 128 KPDNLLLDAKGH---VKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAET 184
Query: 231 ------------VGSAYYVAPEV-LRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSI 277
VG+ Y+APEV ++ Y D WS GVI+Y +L G PPF ET Q
Sbjct: 185 WKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQET 244
Query: 278 FDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERL---SAAEVLNHPWMR-VD-GD 332
+ ++ P IS AKD++ + D + R+ E+ +HP+ VD G
Sbjct: 245 YRKVMNWKETLVFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIKSHPFFEGVDWGH 303
Query: 333 ASDKPLDIAV 342
++P I +
Sbjct: 304 IRERPAAIPI 313
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 109 bits (275), Expect = 6e-27
Identities = 79/266 (29%), Positives = 125/266 (46%), Gaps = 20/266 (7%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG K T + +ACK + ++L R + E +I+ R IV L
Sbjct: 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKIL-EKVSSRFIVSLA 59
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVHYCHSMGVMHR 192
A+E + + L+M L GG+L I G + E A Q++ + + H +++R
Sbjct: 60 YAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYR 119
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEAD 251
DLKPEN L + ++ +D GL+V K G K G+ Y+APEVL+ Y D
Sbjct: 120 DLKPENVLLD---DHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVD 176
Query: 252 IWSAGVILYILLSGVPPFWGETE----QSIFDAILRGHIDFSSDPWPNISSSAKDIVKKM 307
++ G LY +++G PF E + + L +++ S AKD+ + +
Sbjct: 177 WFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDK----FSPEAKDLCEAL 232
Query: 308 LHADPKERL-----SAAEVLNHPWMR 328
L DP++RL SA EV HP +
Sbjct: 233 LQKDPEKRLGCRGGSADEVREHPLFK 258
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 109 bits (275), Expect = 6e-27
Identities = 76/269 (28%), Positives = 135/269 (50%), Gaps = 13/269 (4%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
D + Y ++G+G G Y T Q+ A K ++ L + E + E+ +M
Sbjct: 16 DPKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMN---LQQQPKKELIINEILVMRE 72
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHY 183
H NIV +Y + ++M+ AGG L D ++ + E A +CR+ + + +
Sbjct: 73 NK-HPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 130
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEVL 242
HS V+HRD+K +N L D +K TDFG P + +VG+ Y++APEV+
Sbjct: 131 LHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 187
Query: 243 -RRNYGAEADIWSAGVILYILLSGVPPFWGETE-QSIFDAILRGHIDFSSDPWPNISSSA 300
R+ YG + DIWS G++ ++ G PP+ E ++++ G + + +S+
Sbjct: 188 TRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNP--EKLSAIF 245
Query: 301 KDIVKKMLHADPKERLSAAEVLNHPWMRV 329
+D + + L D ++R SA E+L HP++++
Sbjct: 246 RDFLNRCLEMDVEKRGSAKELLQHPFLKI 274
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Score = 111 bits (278), Expect = 1e-26
Identities = 82/306 (26%), Positives = 132/306 (43%), Gaps = 57/306 (18%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG L DT +A K++ + ++NR+ V V+ E I+ + +V+
Sbjct: 7 KTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAE-ADNEWVVK 65
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L +++D+ ++ +MD GG++ +I + E A ++ + H MG +HR
Sbjct: 66 LYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHR 125
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFK--------------------PGDVFKD--- 229
D+KP+N L D +K TDFGL F+ P D++ D
Sbjct: 126 DIKPDNILIDL---DGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSN 182
Query: 230 -------------------------LVGSAYYVAPEV-LRRNYGAEADIWSAGVILYILL 263
LVG+ Y+APEV LR+ Y D WS GVIL+ +L
Sbjct: 183 CRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEML 242
Query: 264 SGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERL---SAAE 320
G PPF T ++ P +S A D++ K+ + +ERL A +
Sbjct: 243 VGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCS-AEERLGRNGADD 301
Query: 321 VLNHPW 326
+ HP+
Sbjct: 302 IKAHPF 307
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381 |
| >gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 109 bits (273), Expect = 1e-26
Identities = 81/289 (28%), Positives = 132/289 (45%), Gaps = 35/289 (12%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
LG G G K+T FA K+I++ N D + + RE++I IV+
Sbjct: 7 SRLGEGAGGSVTKCRLKNTGMIFALKTITTDP--NPDLQKQILRELEINKS-CKSPYIVK 63
Query: 133 LKGAYEDRHS--VNLIMDLCAGGELFDRIIAK-----GHYSERAAANLCRQMVTVVHYCH 185
GA+ D S + + M+ C GG L D I K G E+ + ++ + Y H
Sbjct: 64 YYGAFLDESSSSIGIAMEYCEGGSL-DSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLH 122
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL----VGSAYYVAPEV 241
S ++HRD+KP N L + + +K DFG+S G++ L G+++Y+APE
Sbjct: 123 SRKIIHRDIKPSNILLTRKGQ---VKLCDFGVS-----GELVNSLAGTFTGTSFYMAPER 174
Query: 242 LR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSS------DPWP 294
++ + Y +D+WS G+ L + PF E E + L +I +P
Sbjct: 175 IQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGN 234
Query: 295 NI--SSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIA 341
I S KD +K+ L DP R + ++L HPW++ K +++A
Sbjct: 235 GIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIK---AQMKKKVNMA 280
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287 |
| >gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 1e-26
Identities = 76/264 (28%), Positives = 124/264 (46%), Gaps = 12/264 (4%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
R LG+G FG + T + +ACK + +++ R E QI+ + R +V
Sbjct: 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNS-RFVVS 64
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVHYCHSMGVM 190
L AYE + ++ L++ L GG+L I G + E A ++ + H ++
Sbjct: 65 LAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIV 124
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAE 249
+RDLKPEN L + ++ +D GL+V G K VG+ Y+APEV++ Y
Sbjct: 125 YRDLKPENILLD---DHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFS 181
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309
D W+ G +LY +++G PF ++ + + R + + S A+ + K +L
Sbjct: 182 PDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLCKMLLC 241
Query: 310 ADPKERL-----SAAEVLNHPWMR 328
DPKERL A EV HP +
Sbjct: 242 KDPKERLGCQGGGAREVKEHPLFK 265
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285 |
| >gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 1e-26
Identities = 86/268 (32%), Positives = 134/268 (50%), Gaps = 20/268 (7%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+GRG FG LV HK T++ +A K +S ++I R D E IM +V+L
Sbjct: 51 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM-AFANSPWVVQLF 109
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
A++D + ++M+ GG+L + +++ E+ A ++V + HSMG +HRD+
Sbjct: 110 YAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDV 168
Query: 195 KPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDL-VGSAYYVAPEVLRRN-----YG 247
KP+N L S LK DFG + K G V D VG+ Y++PEVL+ YG
Sbjct: 169 KPDNMLLDKSGH---LKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYG 225
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL--RGHIDFSSDPWPNISSSAKDIVK 305
E D WS GV LY +L G PF+ ++ + I+ + + F D +IS AK+++
Sbjct: 226 RECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD--NDISKEAKNLIC 283
Query: 306 KMLHADPKERL---SAAEVLNHPWMRVD 330
L D + RL E+ H + + D
Sbjct: 284 AFL-TDREVRLGRNGVEEIKRHLFFKND 310
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371 |
| >gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 1e-26
Identities = 84/309 (27%), Positives = 136/309 (44%), Gaps = 31/309 (10%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
+D ++ E+G G FG Y T+ T + A K +S + +D+ +EV+ +
Sbjct: 17 DDPEEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQ 76
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVH 182
L H N +E KG Y H+ L+M+ C G + K E A + + +
Sbjct: 77 QLK-HPNTIEYKGCYLKEHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLA 135
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL 242
Y HS ++HRD+K N L + E +K DFG + P + F VG+ Y++APEV+
Sbjct: 136 YLHSHNMIHRDIKAGNILLT---EPGQVKLADFGSASKSSPANSF---VGTPYWMAPEVI 189
Query: 243 ----RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI-DFSSDPWPNIS 297
Y + D+WS G+ L PP + S I + S+ W +
Sbjct: 190 LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEW---T 246
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAV--LTRMK-------- 347
S + V L P+ER ++AE+L H ++R D+P + + + R K
Sbjct: 247 DSFRGFVDYCLQKIPQERPASAELLRHDFVR-----RDRPARVLIDLIQRTKDAVRELDN 301
Query: 348 -QFRAMNKL 355
Q+R M K+
Sbjct: 302 LQYRKMKKI 310
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313 |
| >gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 2e-26
Identities = 78/297 (26%), Positives = 128/297 (43%), Gaps = 68/297 (22%)
Query: 78 GQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR--------REVQIMHHLTGHRN 129
G +GV Y K T + A K + K+ E + RE+ I+ L H N
Sbjct: 16 GTYGVVYRARDKKTGEIVALKKL---KM------EKEKEGFPITSLREINILLKL-QHPN 65
Query: 130 IVELK----GAYEDRHSVNLIM-----DLCAGGELFDRIIAKGHYSERAAANLCRQMVTV 180
IV +K G+ + + ++M DL + L + + K + + L Q+++
Sbjct: 66 IVTVKEVVVGS--NLDKIYMVMEYVEHDLKS---LMETM--KQPFLQSEVKCLMLQLLSG 118
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF-KPGDVFKDLVGSAYYVAP 239
V + H ++HRDLK N L ++ LK DFGL+ + P + LV + +Y AP
Sbjct: 119 VAHLHDNWILHRDLKTSNLLLNNRGI---LKICDFGLAREYGSPLKPYTQLVVTLWYRAP 175
Query: 240 EVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR-------------- 283
E+L + Y D+WS G I LL+ P F G++E + I +
Sbjct: 176 ELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFS 235
Query: 284 -----GHIDFSSDP-------WPNISSSAK--DIVKKMLHADPKERLSAAEVLNHPW 326
F+ P +P +S S D++ ++L DP +R+SA + L HP+
Sbjct: 236 ELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPY 292
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293 |
| >gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 3e-26
Identities = 86/304 (28%), Positives = 145/304 (47%), Gaps = 33/304 (10%)
Query: 37 PGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFA 96
P P SSS++S+++S K + ++ +G G G Y V H+ T + +A
Sbjct: 48 PPPSSSSSSSSSSSASGSAPSAAKSLSELER----VNRIGSGAGGTVYKVIHRPTGRLYA 103
Query: 97 CKSISSRKLINRDDVEDVR----REVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152
K I N +D VR RE++I+ + H N+V+ ++ + ++++ G
Sbjct: 104 LKVIYG----NHED--TVRRQICREIEILRDVN-HPNVVKCHDMFDHNGEIQVLLEFMDG 156
Query: 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKA 212
G L IA E+ A++ RQ+++ + Y H ++HRD+KP N L +S+ +K
Sbjct: 157 GSLEGTHIAD----EQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKN---VKI 209
Query: 213 TDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLRR--NYGA----EADIWSAGVILYILLSG 265
DFG+S + + D VG+ Y++PE + N+GA DIWS GV + G
Sbjct: 210 ADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLG 269
Query: 266 VPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA--KDIVKKMLHADPKERLSAAEVLN 323
PF G Q + A L I S P ++S + + L +P +R SA ++L
Sbjct: 270 RFPF-GVGRQGDW-ASLMCAICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQ 327
Query: 324 HPWM 327
HP++
Sbjct: 328 HPFI 331
|
Length = 353 |
| >gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 3e-26
Identities = 82/279 (29%), Positives = 139/279 (49%), Gaps = 31/279 (11%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
ELG G FG Y +K+T A K I ++ + +++ED E+ I+ H NIV+L
Sbjct: 12 ELGDGAFGKVYKAQNKETGVLAAAKVIDTK---SEEELEDYMVEIDILAS-CDHPNIVKL 67
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVHYCHSMGVMH 191
A+ +++ ++++ CAGG + D ++ + +E +C+Q + ++Y H ++H
Sbjct: 68 LDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIH 126
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSV----FFKPGDVFKDLVGSAYYVAPEVLR---- 243
RDLK N LF+ D +K DFG+S + D F +G+ Y++APEV+
Sbjct: 127 RDLKAGNILFTL---DGDIKLADFGVSAKNTRTIQRRDSF---IGTPYWMAPEVVMCETS 180
Query: 244 --RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP--WPNISSS 299
R Y +AD+WS G+ L + PP + I + + P W SS
Sbjct: 181 KDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---SSE 237
Query: 300 AKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338
KD +KK L + R + ++L HP++ V+ S+KP+
Sbjct: 238 FKDFLKKCLEKNVDARWTTTQLLQHPFVTVN---SNKPI 273
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 4e-26
Identities = 82/287 (28%), Positives = 136/287 (47%), Gaps = 12/287 (4%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
D + Y ++G+G G Y T Q+ A K ++ L + E + E+ +M
Sbjct: 16 DPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMN---LQQQPKKELIINEILVMRE 72
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHY 183
+ NIV +Y + ++M+ AGG L D ++ + E A +CR+ + + +
Sbjct: 73 -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALDF 130
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEVL 242
HS V+HRD+K +N L D +K TDFG P + +VG+ Y++APEV+
Sbjct: 131 LHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 187
Query: 243 -RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
R+ YG + DIWS G++ ++ G PP+ E I +P +S+ +
Sbjct: 188 TRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNP-ERLSAVFR 246
Query: 302 DIVKKMLHADPKERLSAAEVLNHPWMRVDGDASD-KPLDIAVLTRMK 347
D + + L D R SA E+L HP++++ S PL IA +K
Sbjct: 247 DFLNRCLEMDVDRRGSAKELLQHPFLKLAKPLSSLTPLIIAAKEAIK 293
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 4e-26
Identities = 79/286 (27%), Positives = 133/286 (46%), Gaps = 43/286 (15%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR----REVQIMHHLTGHRNI 130
+G G +G+ HK+T Q A K K + +D + V+ RE++++ L H N+
Sbjct: 9 VGEGSYGMVMKCKHKETGQIVAIK-----KFLESEDDKMVKKIAMREIRMLKQLR-HENL 62
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVM 190
V L + + + L+ + L D E Q++ + +CHS ++
Sbjct: 63 VNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNII 122
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLVGSAYYVAPEVLRRN--YG 247
HRD+KPEN L S S +K DFG + PG+V+ D V + +Y APE+L + YG
Sbjct: 123 HRDIKPENILVSQSG---VVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYG 179
Query: 248 AEADIWSAGVILYILLSGVPPFWGETE------------------QSIFD-----AILR- 283
DIW+ G ++ +L+G P F G+++ Q IF A +R
Sbjct: 180 RAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRL 239
Query: 284 ---GHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
I+ +P +S D+ K+ L DP +R S++++L+H +
Sbjct: 240 PEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEF 285
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 5e-26
Identities = 76/259 (29%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG +L K T Q FA K++ ++ DDVE E +++ H + L
Sbjct: 3 LGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLY 62
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
++ + ++ +M+ GG+L I + + A +++ + + HS G+++RDL
Sbjct: 63 CTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDL 122
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEVLR-RNYGAEADI 252
K +N L + D +K DFG+ GD G+ Y+APE+L + Y D
Sbjct: 123 KLDNILLDT---DGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDW 179
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP-WPN-ISSSAKDIVKKMLHA 310
WS GV+LY +L G PF G E+ +F +I +P +P ++ AKDI+ K+
Sbjct: 180 WSFGVLLYEMLIGQSPFHGHDEEELFQSIR------MDNPCYPRWLTREAKDILVKLFVR 233
Query: 311 DPKERLSA-AEVLNHPWMR 328
+P+ RL ++ HP+ R
Sbjct: 234 EPERRLGVKGDIRQHPFFR 252
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316 |
| >gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 6e-26
Identities = 83/268 (30%), Positives = 135/268 (50%), Gaps = 20/268 (7%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+GRG FG LV HK +++ +A K +S ++I R D E IM +V+L
Sbjct: 51 IGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIM-AFANSPWVVQLF 109
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
A++D + ++M+ GG+L + +++ E+ A ++V + HSMG++HRD+
Sbjct: 110 CAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDV 168
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFF-KPGDVFKDL-VGSAYYVAPEVLRRN-----YG 247
KP+N L LK DFG + + G V D VG+ Y++PEVL+ YG
Sbjct: 169 KPDNMLLDKHGH---LKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYG 225
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL--RGHIDFSSDPWPNISSSAKDIVK 305
E D WS GV L+ +L G PF+ ++ + I+ + ++F D IS AK+++
Sbjct: 226 RECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPED--VEISKHAKNLIC 283
Query: 306 KMLHADPKERL---SAAEVLNHPWMRVD 330
L D + RL E+ HP+ + D
Sbjct: 284 AFL-TDREVRLGRNGVEEIKQHPFFKND 310
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370 |
| >gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 106 bits (267), Expect = 7e-26
Identities = 73/264 (27%), Positives = 123/264 (46%), Gaps = 12/264 (4%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
R LG+G FG + T + +ACK + +++ R E QI+ + R +V
Sbjct: 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS-RFVVS 64
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRI--IAKGHYSERAAANLCRQMVTVVHYCHSMGVM 190
L AYE + ++ L++ L GG+L I + + E A ++ + H ++
Sbjct: 65 LAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIV 124
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAE 249
+RDLKPEN L ++ +D GL+V G+ + VG+ Y+APEV++ Y
Sbjct: 125 YRDLKPENILLDDYGH---IRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERYTFS 181
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309
D W G ++Y ++ G PF E+ + + R + + S +A+ I +++L
Sbjct: 182 PDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSICRQLLT 241
Query: 310 ADPKERL-----SAAEVLNHPWMR 328
DP RL A EV HP+ R
Sbjct: 242 KDPGFRLGCRGEGAEEVKAHPFFR 265
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285 |
| >gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 9e-26
Identities = 85/308 (27%), Positives = 140/308 (45%), Gaps = 49/308 (15%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y+ + +GRG +G+ + +T ++ A K I++ NR D + RE++++ HL H
Sbjct: 7 YVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIAN-AFDNRIDAKRTLREIKLLRHLD-HE 64
Query: 129 NIVELKG--------AYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTV 180
N++ +K A+ D + V +MD +L I + S+ Q++
Sbjct: 65 NVIAIKDIMPPPHREAFNDVYIVYELMDT----DLHQIIRSSQTLSDDHCQYFLYQLLRG 120
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAP 239
+ Y HS V+HRDLKP N L +++ + LK DFGL+ + GD + V + +Y AP
Sbjct: 121 LKYIHSANVLHRDLKPSNLLLNANCD---LKICDFGLARTTSEKGDFMTEYVVTRWYRAP 177
Query: 240 EVLRR--NYGAEADIWSAGVILYILLSGVPPFWG------------------ETEQSIFD 279
E+L Y D+WS G I LL P F G E +
Sbjct: 178 ELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIR 237
Query: 280 A-----ILRG-----HIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329
+R F + +P+ + A D+++KML DP +R++ E L HP++
Sbjct: 238 NEKARRYIRSLPYTPRQSF-ARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLAS 296
Query: 330 DGDASDKP 337
D SD+P
Sbjct: 297 LHDPSDEP 304
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337 |
| >gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 1e-25
Identities = 80/279 (28%), Positives = 132/279 (47%), Gaps = 34/279 (12%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
ELG+G +G Y V H+ T A K I R ++ + E+ I+H IV+
Sbjct: 8 ELGKGNYGSVYKVLHRPTGVTMAMKEI--RLELDESKFNQIIMELDILHKAVSPY-IVDF 64
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV-TVVHYCHSM----G 188
GA+ +V + M+ G L D++ A G +E ++ R++ VV +
Sbjct: 65 YGAFFIEGAVYMCMEYMDAGSL-DKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN 123
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL----VGSAYYVAPEVLRR 244
++HRD+KP N L + + + +K DFG+S G++ L +G Y+APE ++
Sbjct: 124 IIHRDVKPTNVLVNGNGQ---VKLCDFGVS-----GNLVASLAKTNIGCQSYMAPERIKS 175
Query: 245 -------NYGAEADIWSAGVILYILLSGVPPFWGETEQSIF---DAILRGHIDFSSDPWP 294
Y ++D+WS G+ + + G P+ ET +IF AI+ G D + P
Sbjct: 176 GGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDG--DPPTLP-S 232
Query: 295 NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDA 333
S A+D V K L+ P R + A++L HPW+ +A
Sbjct: 233 GYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNA 271
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286 |
| >gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 107 bits (268), Expect = 1e-25
Identities = 77/269 (28%), Positives = 140/269 (52%), Gaps = 26/269 (9%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+GRG FG +V K+T Q +A K ++ +++ R + R E ++ + R I L
Sbjct: 9 IGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVN-GDRRWITNLH 67
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR----QMVTVVHYCHSMGVM 190
A++D +++ L+MD GG+L +++K + +R ++ R +MV + H +G +
Sbjct: 68 YAFQDENNLYLVMDYYVGGDLLT-LLSK--FEDRLPEDMARFYLAEMVLAIDSVHQLGYV 124
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-GDVFKDL-VGSAYYVAPEVLRR---- 244
HRD+KP+N L + ++ DFG + G V ++ VG+ Y++PE+L+
Sbjct: 125 HRDIKPDNVLLDKNGH---IRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDG 181
Query: 245 --NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL--RGHIDFSSDPWPNISSSA 300
YG E D WS GV +Y +L G PF+ E+ + I+ + H F D ++S A
Sbjct: 182 KGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDV-TDVSEEA 240
Query: 301 KDIVKKMLHADPKERL---SAAEVLNHPW 326
KD++++++ P+ RL + +HP+
Sbjct: 241 KDLIRRLI-CSPETRLGRNGLQDFKDHPF 268
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331 |
| >gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 1e-25
Identities = 74/267 (27%), Positives = 119/267 (44%), Gaps = 41/267 (15%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+GRG FG LV KDT +A K + ++ ++ V +R E I+ +V++
Sbjct: 9 IGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVE-ADSLWVVKMF 67
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
+++D+ ++ LIM+ GG++ ++ K +E + V + H +G +HRD+
Sbjct: 68 YSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDI 127
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFK---------------PGD-VFKDL-------- 230
KP+N L S +K +DFGL K P D F+++
Sbjct: 128 KPDNLLLDSKGH---VKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAET 184
Query: 231 ------------VGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSI 277
VG+ Y+APEV + Y D WS GVI+Y +L G PPF ET Q
Sbjct: 185 WKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQET 244
Query: 278 FDAILRGHIDFSSDPWPNISSSAKDIV 304
+ ++ P IS AKD++
Sbjct: 245 YKKVMNWKETLIFPPEVPISEKAKDLI 271
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363 |
| >gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Score = 105 bits (265), Expect = 1e-25
Identities = 85/292 (29%), Positives = 125/292 (42%), Gaps = 53/292 (18%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGH 127
++G G +GV Y +K T Q A K I R + E+ RE+ ++ L H
Sbjct: 7 KIGEGTYGVVYKGRNKKTGQIVAMKKI-------RLESEEEGVPSTAIREISLLKELQ-H 58
Query: 128 RNIVELKGAYEDRHSVNLI-----MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVH 182
NIV L+ + LI MDL + D + + + Q++ +
Sbjct: 59 PNIVCLQDVLMQESRLYLIFEFLSMDL---KKYLDSLPKGQYMDAELVKSYLYQILQGIL 115
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEV 241
+CHS V+HRDLKP+N L + +K DFGL+ F P V+ V + +Y APEV
Sbjct: 116 FCHSRRVLHRDLKPQNLLIDNKGV---IKLADFGLARAFGIPVRVYTHEVVTLWYRAPEV 172
Query: 242 L--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP----- 294
L Y DIWS G I + + P F G++E I R + D WP
Sbjct: 173 LLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSL 232
Query: 295 --------------------NISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
N+ D+++KML DP +R+SA + LNHP+
Sbjct: 233 PDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPY 284
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285 |
| >gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Score = 106 bits (267), Expect = 2e-25
Identities = 74/282 (26%), Positives = 137/282 (48%), Gaps = 25/282 (8%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
R +GRG + LV K T++ +A K I + + +D++ V+ E + + H +V
Sbjct: 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVG 60
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L ++ + +++ +GG+L + + E A ++ +++ H G+++R
Sbjct: 61 LHSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYR 120
Query: 193 DLKPENFLFSSSAEDSPLKATDFGL-SVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEA 250
DLK +N L + + +K TD+G+ +PGD G+ Y+APE+LR +YG
Sbjct: 121 DLKLDNVLLDA---EGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSV 177
Query: 251 DIWSAGVILYILLSGVPPF---------WGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
D W+ GV+++ +++G PF TE +F IL I ++S A
Sbjct: 178 DWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPR----SLSVKAS 233
Query: 302 DIVKKMLHADPKERLSA------AEVLNHPWMR-VDGDASDK 336
++K L+ DPKERL ++ +HP+ R +D D ++
Sbjct: 234 SVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDWDLLEQ 275
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329 |
| >gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 2e-25
Identities = 69/244 (28%), Positives = 118/244 (48%), Gaps = 9/244 (3%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG L K T + +A K + +I DDVE E +++ + +L
Sbjct: 8 LGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLH 67
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
++ + +M+ GG+L +I G + E A ++ + + HS G+++RDL
Sbjct: 68 SCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDL 127
Query: 195 KPENFLFSSSAEDSPLKATDFGL-SVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEADI 252
K +N + S +K DFG+ G K G+ Y+APE++ + YG D
Sbjct: 128 KLDNVMLDSEGH---IKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDW 184
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
W+ GV+LY +L+G PF GE E +F +I+ ++ + ++S A I K ++ P
Sbjct: 185 WAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAICKGLMTKHP 240
Query: 313 KERL 316
+RL
Sbjct: 241 GKRL 244
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323 |
| >gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 2e-25
Identities = 90/336 (26%), Positives = 134/336 (39%), Gaps = 65/336 (19%)
Query: 62 MEDVRNTYIF-GRELGRGQFGVTYLVTHKDTKQQFACK-----SISSRKLINRDDVEDV- 114
+ YI G LG G +G T + A K IS+ +R V
Sbjct: 3 SFSISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCG 62
Query: 115 -----RREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERA 169
RE++IM+ + H NI+ L Y + +NL+MD+ A +L + K +E
Sbjct: 63 IHFTTLRELKIMNEIK-HENIMGLVDVYVEGDFINLVMDIMAS-DLKKVVDRKIRLTESQ 120
Query: 170 AANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD 229
+ Q++ ++ H MHRDL P N +S K DFGL+ +
Sbjct: 121 VKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGI---CKIADFGLARRYGYPPYSDT 177
Query: 230 L---------------VGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGE 272
L V + +Y APE+L Y D+WS G I LL+G P F GE
Sbjct: 178 LSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGE 237
Query: 273 TE----QSIFDAILRG---------------HIDFS-------SDPWPNISSSAKDIVKK 306
E IF+ L G + +F+ +PN S A D+++
Sbjct: 238 NEIDQLGRIFE--LLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQS 295
Query: 307 MLHADPKERLSAAEVLNHPWMRVDG---DASDKPLD 339
+L +P ER+SA E L H + + D D S P +
Sbjct: 296 LLKLNPLERISAKEALKHEYFKSDPLPCDPSQLPFN 331
|
Length = 335 |
| >gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Score = 104 bits (262), Expect = 3e-25
Identities = 78/288 (27%), Positives = 121/288 (42%), Gaps = 46/288 (15%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED-----VRREVQIMHHLTGHR 128
+LG G + Y ++ T + A K I D E+ RE+ +M L H
Sbjct: 7 KLGEGTYATVYKGRNRTTGEIVALKEI-------HLDAEEGTPSTAIREISLMKELK-HE 58
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGG--ELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
NIV L + + L+ + + D +G + Q++ + +CH
Sbjct: 59 NIVRLHDVIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHE 118
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVL--R 243
V+HRDLKP+N L + E LK DFGL+ F P + F + V + +Y AP+VL
Sbjct: 119 NRVLHRDLKPQNLLINKRGE---LKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGS 175
Query: 244 RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK-- 301
R Y DIWS G I+ +++G P F G + I R + WP IS +
Sbjct: 176 RTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYK 235
Query: 302 -----------------------DIVKKMLHADPKERLSAAEVLNHPW 326
D++ ++L +P+ R+SA + L HPW
Sbjct: 236 PTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPW 283
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284 |
| >gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 105 bits (265), Expect = 4e-25
Identities = 88/316 (27%), Positives = 139/316 (43%), Gaps = 46/316 (14%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V + Y +G G +G T ++ A K +S R + + RE
Sbjct: 6 LNKTVWEVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLS-RPFQSAIHAKRTYRE 64
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + ED V L+ L G +L + I+ S+
Sbjct: 65 LRLLKHMD-HENVIGLLDVFTPASSLEDFQDVYLVTHL-MGADL-NNIVKCQKLSDDHIQ 121
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS G++HRDLKP N + ED LK DFGL+ D V
Sbjct: 122 FLVYQILRGLKYIHSAGIIHRDLKPSNIAVN---EDCELKILDFGLAR--HTDDEMTGYV 176
Query: 232 GSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL------- 282
+ +Y APE++ +Y DIWS G I+ LL+G F G I+
Sbjct: 177 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPD 236
Query: 283 ------------RGHI---------DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEV 321
R +I DF + + + A D+++KML DP +R++AAE
Sbjct: 237 EELLQKISSESARNYIQSLPQMPKKDF-KEVFSGANPLAIDLLEKMLVLDPDKRITAAEA 295
Query: 322 LNHPWMRVDGDASDKP 337
L HP++ D D+P
Sbjct: 296 LAHPYLAEYHDPEDEP 311
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 4e-25
Identities = 74/268 (27%), Positives = 130/268 (48%), Gaps = 11/268 (4%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
D + Y ++G+G G Y T Q+ A + ++ L + E + E+ +M
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMRE 73
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHY 183
+ NIV +Y + ++M+ AGG L D ++ + E A +CR+ + + +
Sbjct: 74 -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 131
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFK-DLVGSAYYVAPEVL 242
HS V+HRD+K +N L D +K TDFG P + +VG+ Y++APEV+
Sbjct: 132 LHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 188
Query: 243 -RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
R+ YG + DIWS G++ ++ G PP+ E I +P +S+ +
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFR 247
Query: 302 DIVKKMLHADPKERLSAAEVLNHPWMRV 329
D + + L D ++R SA E+L H ++++
Sbjct: 248 DFLNRCLDMDVEKRGSAKELLQHQFLKI 275
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Score = 105 bits (262), Expect = 6e-25
Identities = 68/244 (27%), Positives = 117/244 (47%), Gaps = 9/244 (3%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG L K T + +A K + +I DDVE E +++ + +L
Sbjct: 8 LGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLH 67
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
++ + +M+ GG+L I G + E A ++ + + H G+++RDL
Sbjct: 68 SCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDL 127
Query: 195 KPENFLFSSSAEDSPLKATDFGL-SVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEADI 252
K +N + S +K DFG+ G + G+ Y+APE++ + YG D
Sbjct: 128 KLDNVMLDSEGH---IKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDW 184
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
W+ GV+LY +L+G PPF GE E +F +I+ ++ + ++S A I K ++ P
Sbjct: 185 WAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK----SLSKEAVSICKGLMTKHP 240
Query: 313 KERL 316
+RL
Sbjct: 241 SKRL 244
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323 |
| >gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 108 bits (270), Expect = 9e-25
Identities = 99/322 (30%), Positives = 149/322 (46%), Gaps = 53/322 (16%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
N Y +++G G+FG +LV HK T++ F K+IS R L R+ + V EV +M L
Sbjct: 13 NEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLV-IEVNVMRELK- 70
Query: 127 HRNIVELKGAYEDR------HSVNLIMDLCAGGELFDRIIAK-----GHYSERAAANLCR 175
H+NIV Y DR + ++M+ C G+L R I K G E A ++ R
Sbjct: 71 HKNIVR----YIDRFLNKANQKLYILMEFCDAGDL-SRNIQKCYKMFGKIEEHAIVDITR 125
Query: 176 QMVTVVHYCHSMG-------VMHRDLKPENFLFSS--------SAEDSPL------KATD 214
Q++ + YCH++ V+HRDLKP+N S+ +A+ + L K D
Sbjct: 126 QLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGD 185
Query: 215 FGLSVFFKPGDVFKDLVGSAYYVAPEVL---RRNYGAEADIWSAGVILYILLSGVPPFWG 271
FGLS + VG+ YY +PE+L ++Y ++D+W+ G I+Y L SG PF
Sbjct: 186 FGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHK 245
Query: 272 ETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH------- 324
S + L+ D P S ++K +L+ KER SA + L +
Sbjct: 246 ANNFSQLISELKRGPDL---PIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNVG 302
Query: 325 -PWMRVDGDASDKPLDIAVLTR 345
P G A AV+ R
Sbjct: 303 PPVGAAGGGAGVAAAPGAVVAR 324
|
Length = 1021 |
| >gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 1e-24
Identities = 67/250 (26%), Positives = 126/250 (50%), Gaps = 12/250 (4%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+++GRGQF Y T ++ A K + ++++ +D +E+ ++ L H N+++
Sbjct: 8 KKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLN-HPNVIK 66
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRII----AKGHYSERAAANLCRQMVTVVHYCHSMG 188
++ + + +N++++L G+L I K ER Q+ + V + HS
Sbjct: 67 YLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR 126
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV-FKDLVGSAYYVAPEVLRRN-Y 246
VMHRD+KP N +++ +K D GL FF LVG+ YY++PE + N Y
Sbjct: 127 VMHRDIKPANVFITATGV---VKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGY 183
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR-GHIDFSSDPWPNISSSAKDIVK 305
++DIWS G +LY + + PF+G+ + ++F + D+ P + S +++V
Sbjct: 184 NFKSDIWSLGCLLYEMAALQSPFYGD-KMNLFSLCQKIEQCDYPPLPTEHYSEKLRELVS 242
Query: 306 KMLHADPKER 315
++ DP +R
Sbjct: 243 MCIYPDPDQR 252
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267 |
| >gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 1e-24
Identities = 78/266 (29%), Positives = 129/266 (48%), Gaps = 22/266 (8%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSI----SSRKLINRDDVEDVRREVQIMHHLTGH 127
G+ LGRG FG YL DT ++ A K + S++ +V + E+Q++ +L H
Sbjct: 7 GKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQE--TSKEVNALECEIQLLKNLR-H 63
Query: 128 RNIVELKGAYED--RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
IV+ G D +++ ++ GG + D++ A G +E RQ++ V Y H
Sbjct: 64 DRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLH 123
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS----VFFKPGDVFKDLVGSAYYVAPEV 241
S ++HRD+K N L S+ +K DFG S G K + G+ Y+++PEV
Sbjct: 124 SNMIVHRDIKGANILRDSAGN---VKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEV 180
Query: 242 LR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP-NISSS 299
+ YG +AD+WS + +L+ PP W E E AI + + P +S +
Sbjct: 181 ISGEGYGRKADVWSVACTVVEMLTEKPP-WAEYEA--MAAIFKIATQPTKPMLPDGVSDA 237
Query: 300 AKDIVKKMLHADPKERLSAAEVLNHP 325
+D +K++ + K R +A +L HP
Sbjct: 238 CRDFLKQIFVEE-KRRPTAEFLLRHP 262
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264 |
| >gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Score = 104 bits (260), Expect = 1e-24
Identities = 74/280 (26%), Positives = 131/280 (46%), Gaps = 23/280 (8%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
R +GRG + LV K Q +A K + + + +D++ V+ E + + + +V
Sbjct: 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVG 60
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L ++ + L+++ GG+L + + E A ++ +++ H G+++R
Sbjct: 61 LHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYR 120
Query: 193 DLKPENFLFSSSAEDSPLKATDFGL-SVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEA 250
DLK +N L D +K TD+G+ PGD G+ Y+APE+LR YG
Sbjct: 121 DLKLDNVLLD---ADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSV 177
Query: 251 DIWSAGVILYILLSGVPPF-------WGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303
D W+ GV+++ +++G PF TE +F IL I +S A +
Sbjct: 178 DWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPR----FLSVKASHV 233
Query: 304 VKKMLHADPKERLSA------AEVLNHPWMR-VDGDASDK 336
+K L+ DPKERL +++ +H + R +D D +K
Sbjct: 234 LKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSIDWDLLEK 273
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327 |
| >gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 1e-24
Identities = 84/300 (28%), Positives = 129/300 (43%), Gaps = 52/300 (17%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVE-DVRREVQIMHHLTGHRNIVEL 133
+G G +G+ Y + + A K + RD + RE+ ++ +L H NIVEL
Sbjct: 15 IGEGTYGIVYRARDTTSGEIVALKKVRMDN--ERDGIPISSLREITLLLNLR-HPNIVEL 71
Query: 134 KGAYEDRH--SVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGV 189
K +H S+ L+M+ C L D + +SE L Q++ + Y H +
Sbjct: 72 KEVVVGKHLDSIFLVMEYCEQDLASLLDNMPTP--FSESQVKCLMLQLLRGLQYLHENFI 129
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL---VGSAYYVAPEVL--RR 244
+HRDLK N L + LK DFGL+ + G K + V + +Y APE+L
Sbjct: 130 IHRDLKVSNLLLTDKGC---LKIADFGLARTY--GLPAKPMTPKVVTLWYRAPELLLGCT 184
Query: 245 NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAI--LRG----HI--DFSSDP---- 292
Y D+W+ G IL LL+ P G++E D I L G I FS P
Sbjct: 185 TYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGK 244
Query: 293 --------------WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338
+P +S + ++ +L DPK+R +A E L + + +KPL
Sbjct: 245 FTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFK------EKPL 298
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309 |
| >gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Score = 102 bits (255), Expect = 1e-24
Identities = 69/259 (26%), Positives = 127/259 (49%), Gaps = 11/259 (4%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+++G G FG YL K + K I K+ ++ E ++EV ++ + H NIV
Sbjct: 6 KKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEK-EASKKEVILLAKMK-HPNIVT 63
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRI-IAKG-HYSERAAANLCRQMVTVVHYCHSMGVM 190
++++ + ++M+ C GG+L RI +G +SE + Q+ + + H ++
Sbjct: 64 FFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKIL 123
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLR-RNYGA 248
HRD+K +N S + + K DFG++ ++ VG+ YY++PE+ + R Y
Sbjct: 124 HRDIKSQNIFLSKNGMVA--KLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPYNN 181
Query: 249 EADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKML 308
+ DIWS G +LY L + PF G + I +G+ S PN S + ++ ++
Sbjct: 182 KTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAPIS---PNFSRDLRSLISQLF 238
Query: 309 HADPKERLSAAEVLNHPWM 327
P++R S +L P++
Sbjct: 239 KVSPRDRPSITSILKRPFL 257
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257 |
| >gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 104 bits (262), Expect = 1e-24
Identities = 84/313 (26%), Positives = 141/313 (45%), Gaps = 62/313 (19%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+G+G FG LV KDT + +A K++ ++ +D + V+ E ++ + +V L
Sbjct: 9 IGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAE-SDSPWVVSLY 67
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
+++D + LIM+ GG+L +I +SE + V + H +G +HRD+
Sbjct: 68 YSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDI 127
Query: 195 KPENFLFSSSAEDSPLKATDFGLSV-FFKPGD--VFKDL--------------------- 230
KP+N L +K +DFGLS F K D ++ L
Sbjct: 128 KPDNILIDR---GGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSI 184
Query: 231 ------------------------VGSAYYVAPEV-LRRNYGAEADIWSAGVILYILLSG 265
VG+ Y+APE+ L++ YG E D WS G I++ L G
Sbjct: 185 NLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIG 244
Query: 266 VPPFWGETEQSIFDAIL--RGHIDFSSDPWPNISSSAKDIVKKMLHADPKERL---SAAE 320
PPF E + I+ R + F D ++S A+D++++++ + + RL A E
Sbjct: 245 WPPFCSENSHETYRKIINWRETLYFPDD--IHLSVEAEDLIRRLI-TNAENRLGRGGAHE 301
Query: 321 VLNHPWMR-VDGD 332
+ +HP+ R VD D
Sbjct: 302 IKSHPFFRGVDWD 314
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377 |
| >gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 2e-24
Identities = 68/192 (35%), Positives = 103/192 (53%), Gaps = 16/192 (8%)
Query: 143 VNLIMDLCAGGELFDRIIAKGH----YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPEN 198
+ L++D G+L I ++ + E A L Q++ VH+ HS ++HRD+K N
Sbjct: 114 IALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSAN 173
Query: 199 FLFSSSAEDSPLKATDFGLSVFFK---PGDVFKDLVGSAYYVAPEVLRRN-YGAEADIWS 254
L S + +K DFG S + DV + G+ YYVAPE+ RR Y +AD++S
Sbjct: 174 ILLCS---NGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFS 230
Query: 255 AGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP-NISSSAKDIVKKMLHADPK 313
GV+LY LL+ PF GE + + L G DP P +IS ++IV +L +DPK
Sbjct: 231 LGVLLYELLTLKRPFDGENMEEVMHKTLAGRY----DPLPPSISPEMQEIVTALLSSDPK 286
Query: 314 ERLSAAEVLNHP 325
R S++++LN P
Sbjct: 287 RRPSSSKLLNMP 298
|
Length = 496 |
| >gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 2e-24
Identities = 80/278 (28%), Positives = 130/278 (46%), Gaps = 26/278 (9%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG L K + FA K++ ++ DDVE E +++ + + L
Sbjct: 3 LGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLY 62
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
++ + + +M+ GG+L I KG + A ++V + + HS G+++RDL
Sbjct: 63 CTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDL 122
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-----LVGSAYYVAPEVLR-RNYGA 248
K +N + D +K DFG+ +VF D G+ Y+APE+L+ Y
Sbjct: 123 KLDNVMLD---RDGHIKIADFGMC----KENVFGDNRASTFCGTPDYIAPEILQGLKYTF 175
Query: 249 EADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP-WPNISSSAKDIVKKM 307
D WS GV+LY +L G PF G+ E +F++I +D P W I+ +KDI++K+
Sbjct: 176 SVDWWSFGVLLYEMLIGQSPFHGDDEDELFESI---RVDTPHYPRW--ITKESKDILEKL 230
Query: 308 LHADPKERLS-AAEVLNHP------WMRVDGDASDKPL 338
DP RL + HP W ++ D P
Sbjct: 231 FERDPTRRLGVVGNIRGHPFFKTINWTALEKRELDPPF 268
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316 |
| >gnl|CDD|185503 PTZ00183, PTZ00183, centrin; Provisional | Back alignment and domain information |
|---|
Score = 99.0 bits (247), Expect = 2e-24
Identities = 52/147 (35%), Positives = 85/147 (57%), Gaps = 4/147 (2%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
L+E++ ++E F DTD SGTI +ELK + LG + E++Q++ D DG+G I
Sbjct: 11 LTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKI 70
Query: 427 DYIEFI-TATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY--NMGDAKTIK 483
D+ EF+ T + + E + KAF FD D +G I+++ L+ K+ + D + ++
Sbjct: 71 DFEEFLDIMTKKLGERDPREEILKAFRLFDDDKTGKISLKNLKRVAKELGETITDEE-LQ 129
Query: 484 EIIAEVDIDNDGRINYEEFAAMMRKGN 510
E+I E D + DG I+ EEF +M+K N
Sbjct: 130 EMIDEADRNGDGEISEEEFYRIMKKTN 156
|
Length = 158 |
| >gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 2e-24
Identities = 72/264 (27%), Positives = 122/264 (46%), Gaps = 12/264 (4%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
R LG+G FG + T + +ACK + +++ R E +I+ + R +V
Sbjct: 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNS-RFVVS 64
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVHYCHSMGVM 190
L AYE + ++ L++ + GG+L I G+ + E+ A ++ + ++
Sbjct: 65 LAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIV 124
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAE 249
+RDLKPEN L ++ +D GL+V G+ + VG+ Y+APEV+ Y
Sbjct: 125 YRDLKPENILLDDRGH---IRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEKYTFS 181
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309
D W G ++Y ++ G PF E+ + + R + + S AK I + +L
Sbjct: 182 PDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICRMLLT 241
Query: 310 ADPKERL-----SAAEVLNHPWMR 328
+PKERL AA V HP +
Sbjct: 242 KNPKERLGCRGNGAAGVKQHPIFK 265
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285 |
| >gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Score = 102 bits (255), Expect = 4e-24
Identities = 82/298 (27%), Positives = 134/298 (44%), Gaps = 53/298 (17%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR--REVQIMHHLTGHRNIV 131
++G G +G Y KDT + A K + +L N + + RE++I+ L HRNIV
Sbjct: 14 QIGEGTYGQVYKARDKDTGELVALKKV---RLDNEKEGFPITAIREIKILRQLN-HRNIV 69
Query: 132 ELKGAYEDRH-SVNLIMDLCAGGELFDR-------IIAKG--HYSERAAANLCRQMVTVV 181
LK D+ +++ D A +F+ ++ G H+SE + +Q++ +
Sbjct: 70 NLKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGL 129
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV--FKDLVGSAYYVAP 239
+YCH +HRD+K N L ++ + +K DFGL+ + + + + V + +Y P
Sbjct: 130 NYCHKKNFLHRDIKCSNILLNNKGQ---IKLADFGLARLYNSEESRPYTNKVITLWYRPP 186
Query: 240 EVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP--WPN 295
E+L YG D+WS G IL L + P F E + + I R + S P WP+
Sbjct: 187 ELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISR--LCGSPCPAVWPD 244
Query: 296 --------------------------ISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
I + A D++ ML DP +R +A E LN PW+
Sbjct: 245 VIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302 |
| >gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 102 bits (257), Expect = 4e-24
Identities = 91/326 (27%), Positives = 133/326 (40%), Gaps = 72/326 (22%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISS--------RKLINRDDVEDV 114
DV Y +G G +G+ THK T + A K IS R L
Sbjct: 1 FDVGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTL--------- 51
Query: 115 RREVQIMHHLTGHRNIVELK-----GAYEDRHSVNLI---M--DLCAGGELFDRIIAKGH 164
RE++I+ H NI+ + ++E + V ++ M DL ++I H
Sbjct: 52 -REIKILRRFK-HENIIGILDIIRPPSFESFNDVYIVQELMETDLY-------KLIKTQH 102
Query: 165 YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224
S Q++ + Y HS V+HRDLKP N L +++ + LK DFGL+ P
Sbjct: 103 LSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCD---LKICDFGLARIADPE 159
Query: 225 DVFK----DLVGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWG------- 271
+ V + +Y APE++ + Y DIWS G IL +LS P F G
Sbjct: 160 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQL 219
Query: 272 ------------ETEQSIFDAILRGHID----FSSDPW----PNISSSAKDIVKKMLHAD 311
E I R +I PW PN A D++ KML +
Sbjct: 220 NLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFN 279
Query: 312 PKERLSAAEVLNHPWMRVDGDASDKP 337
P +R++ E L HP++ D SD+P
Sbjct: 280 PHKRITVEEALAHPYLEQYHDPSDEP 305
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 4e-24
Identities = 64/274 (23%), Positives = 122/274 (44%), Gaps = 37/274 (13%)
Query: 70 IFGRELGRGQFGV----TYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
G++LG G FG T + T+ + A K++ ++ + ++ E+ E IM L
Sbjct: 2 ELGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTL--KEGASEEEREEFLEEASIMKKL- 58
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYC 184
H NIV L G + ++ + GG+L D + G + + + Q+ + Y
Sbjct: 59 SHPNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGEKLTLKDLLQMALQIAKGMEYL 118
Query: 185 HSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV------- 237
S +HRDL N L + E+ +K +DFGLS +D+ YY
Sbjct: 119 ESKNFVHRDLAARNCLVT---ENLVVKISDFGLS---------RDIYEDDYYRKRGGGKL 166
Query: 238 -----APEVLRRN-YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSS 290
APE L+ + +++D+WS GV+L+ + + G P+ G + + + + + G+
Sbjct: 167 PIKWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLELLEDGYR---L 223
Query: 291 DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324
N +++ + DP++R + +E++
Sbjct: 224 PRPENCPDELYELMLQCWAYDPEDRPTFSELVED 257
|
Length = 258 |
| >gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 6e-24
Identities = 68/265 (25%), Positives = 129/265 (48%), Gaps = 15/265 (5%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y F R +G+G +G LV H+ +Q+ K ++ R R+ + +E Q++ L H
Sbjct: 2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRER-KAAEQEAQLLSQLK-HP 59
Query: 129 NIVELKGAYEDRHS-VNLIMDLCAGGELFDRII-AKGH-YSERAAANLCRQMVTVVHYCH 185
NIV + ++E + ++M C GG+L+ ++ KG E Q+ + Y H
Sbjct: 60 NIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLH 119
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVL-R 243
++HRDLK +N + + + +K D G++ V D+ L+G+ YY++PE+
Sbjct: 120 EKHILHRDLKTQNVFLTRT---NIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSN 176
Query: 244 RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP-NISSSAKD 302
+ Y ++D+W+ G +Y + + F + S+ I+ G + P P + S +
Sbjct: 177 KPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKL----PPMPKDYSPELGE 232
Query: 303 IVKKMLHADPKERLSAAEVLNHPWM 327
++ ML P++R S +L P++
Sbjct: 233 LIATMLSKRPEKRPSVKSILRQPYI 257
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257 |
| >gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 8e-24
Identities = 84/297 (28%), Positives = 120/297 (40%), Gaps = 66/297 (22%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGHR 128
+G G +GV Y K T + A K I R + ED RE+ ++ L H
Sbjct: 7 IGEGTYGVVYKARDKLTGEIVALKKI-------RLETEDEGVPSTAIREISLLKELN-HP 58
Query: 129 NIVELKGAYEDRHSVNLI-----------MDLCAGGELFDRIIAKGHYSERAAANLCRQM 177
NIV L + + L+ MD L +I Y Q+
Sbjct: 59 NIVRLLDVVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLY----------QL 108
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYY 236
+ + YCHS V+HRDLKP+N L + LK DFGL+ F P + V + +Y
Sbjct: 109 LQGIAYCHSHRVLHRDLKPQNLLIDR---EGALKLADFGLARAFGVPVRTYTHEVVTLWY 165
Query: 237 VAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQS----IFDAI--------- 281
APE+L R Y DIWS G I +++ P F G++E IF +
Sbjct: 166 RAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWP 225
Query: 282 -LRGHIDFSS-----------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
+ D+ PN+ D++ KML DP +R+SA L HP+
Sbjct: 226 GVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPY 282
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283 |
| >gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 8e-24
Identities = 82/284 (28%), Positives = 129/284 (45%), Gaps = 40/284 (14%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+G G +GV HK+TK+ A K + N + E RE++++ L NIVELK
Sbjct: 9 VGEGAYGVVLKCRHKETKEIVAIKKFKDSEE-NEEVKETTLRELKMLRTLK-QENIVELK 66
Query: 135 GAYEDRHSVNLIMDLCAGG--ELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
A+ R + L+ + EL + + G E+ + + Q++ +H+CH ++HR
Sbjct: 67 EAFRRRGKLYLVFEYVEKNMLELLEEM-PNGVPPEKVRSYI-YQLIKAIHWCHKNDIVHR 124
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD--VFKDLVGSAYYVAPEVLR-RNYGAE 249
D+KPEN L S + LK DFG + G + + V + +Y +PE+L YG
Sbjct: 125 DIKPENLLISH---NDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKA 181
Query: 250 ADIWSAGVILYILLSGVPPFWGETE------------------QSIFDAILRGH-IDFSS 290
D+WS G IL L G P F GE+E +F + R H + F +
Sbjct: 182 VDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPA 241
Query: 291 DPWPN---------ISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
P +S D++K +L +P +R + LNHP
Sbjct: 242 VNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHP 285
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 1e-23
Identities = 74/265 (27%), Positives = 130/265 (49%), Gaps = 24/265 (9%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G +G+ Y T+ + A K I R + V+ + E+ + +L HRNIV+
Sbjct: 16 LGKGTYGIVYAARDLSTQVRIAIKEIPER---DSRYVQPLHEEIALHSYLK-HRNIVQYL 71
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKG---HYSERAAANLCRQMVTVVHYCHSMGVMH 191
G+ + + M+ GG L + +K +E+ +Q++ + Y H ++H
Sbjct: 72 GSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVH 131
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLS---VFFKPGDVFKDLVGSAYYVAPEVL---RRN 245
RD+K +N L ++ + +K +DFG S P + G+ Y+APEV+ R
Sbjct: 132 RDIKGDNVLVNTYS--GVVKISDFGTSKRLAGINP--CTETFTGTLQYMAPEVIDKGPRG 187
Query: 246 YGAEADIWSAGVILYILLSGVPPFW--GETEQSIFD-AILRGHIDFSSDPWPNISSSAKD 302
YGA ADIWS G + + +G PPF GE + ++F + + H + +S+ AK+
Sbjct: 188 YGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPES----LSAEAKN 243
Query: 303 IVKKMLHADPKERLSAAEVLNHPWM 327
+ + DP +R SA ++L P++
Sbjct: 244 FILRCFEPDPDKRASAHDLLQDPFL 268
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 1e-23
Identities = 85/318 (26%), Positives = 133/318 (41%), Gaps = 66/318 (20%)
Query: 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR--REV 118
P D + Y ++G+G FG + HK TKQ A K + + N + + RE+
Sbjct: 6 PFCDEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKV---LMENEKEGFPITALREI 62
Query: 119 QIMHHLTGHRNIVEL--------KGAYEDRHSVNLIMDLC----AGGELFDRIIAKGHYS 166
+I+ L H N+V L + S L+ + C AG L K S
Sbjct: 63 KILQLLK-HENVVNLIEICRTKATPYNRYKGSFYLVFEFCEHDLAG--LLSNKNVKFTLS 119
Query: 167 ERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF----- 221
E + + ++ ++Y H ++HRD+K N L + +D LK DFGL+ F
Sbjct: 120 EIKK--VMKMLLNGLYYIHRNKILHRDMKAANILIT---KDGILKLADFGLARAFSLSKN 174
Query: 222 -KPGDVFKDLVGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIF 278
KP + + + V + +Y PE+L R+YG D+W AG I+ + + P G TEQ
Sbjct: 175 SKP-NRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQL 233
Query: 279 DAI--LRGHIDFSSDPWPNI----------------------------SSSAKDIVKKML 308
I L G I + + WP + A D++ K+L
Sbjct: 234 TLISQLCGSI--TPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLL 291
Query: 309 HADPKERLSAAEVLNHPW 326
DP +R+ A LNH +
Sbjct: 292 VLDPAKRIDADTALNHDF 309
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310 |
| >gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 2e-23
Identities = 59/187 (31%), Positives = 83/187 (44%), Gaps = 29/187 (15%)
Query: 167 ERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGD 225
+ + Q++ V +CH GVMHRDLKP+N L LK D GL F P
Sbjct: 109 AKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKG--LLKIADLGLGRAFSIPVK 166
Query: 226 VFKDLVGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETE----QSIFD 279
+ + + +Y APEVL +Y DIWS G I + P F G++E IF
Sbjct: 167 SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFK 226
Query: 280 AI-------------LRGHIDFS-------SDPWPNISSSAKDIVKKMLHADPKERLSAA 319
+ LR +F S P++S D+++KML DP +R+SA
Sbjct: 227 LLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAK 286
Query: 320 EVLNHPW 326
L HP+
Sbjct: 287 AALTHPY 293
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295 |
| >gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Score = 99.9 bits (249), Expect = 2e-23
Identities = 80/298 (26%), Positives = 123/298 (41%), Gaps = 66/298 (22%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGH 127
++G G +GV Y +K T + A K I R D E RE+ ++ L H
Sbjct: 7 KIGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELN-H 58
Query: 128 RNIVELKGAYEDRHSVNLI-----------MDLCAGGELFDRIIAKGHYSERAAANLCRQ 176
NIV+L + + L+ MD + +I + Q
Sbjct: 59 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIK----------SYLFQ 108
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAY 235
++ + +CHS V+HRDLKP+N L + + +K DFGL+ F P + V + +
Sbjct: 109 LLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFGLARAFGVPVRTYTHEVVTLW 165
Query: 236 YVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR--GHIDFSSD 291
Y APE+L + Y DIWS G I +++ F G++E I R G D
Sbjct: 166 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 225
Query: 292 P--------------W---------PNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
P W P + +D++ +MLH DP +R+SA L HP+
Sbjct: 226 PGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPF 283
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284 |
| >gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Score = 99.2 bits (247), Expect = 2e-23
Identities = 71/267 (26%), Positives = 123/267 (46%), Gaps = 17/267 (6%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSI---SSRKLINRDDVEDVRREVQIMHHLTGHR 128
G LG+G +G Y + Q A K + +S L + E ++ EV ++ L H
Sbjct: 5 GEVLGKGAYGTVYCGL-TNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLK-HV 62
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
NIV+ G D +++++ M+ GG + + G E +Q++ V Y H+
Sbjct: 63 NIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNC 122
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFG-------LSVFFKPGDVFKDLVGSAYYVAPEV 241
V+HRD+K N + + +K DFG + + ++ K + G+ Y++APEV
Sbjct: 123 VVHRDIKGNNVMLMPNG---IIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEV 179
Query: 242 LRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300
+ + YG ++DIWS G ++ + +G PP + I P + S++A
Sbjct: 180 INESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLP-DSFSAAA 238
Query: 301 KDIVKKMLHADPKERLSAAEVLNHPWM 327
D V L D ER SA ++L H ++
Sbjct: 239 IDFVTSCLTRDQHERPSALQLLRHDFL 265
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265 |
| >gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 3e-23
Identities = 79/289 (27%), Positives = 129/289 (44%), Gaps = 51/289 (17%)
Query: 96 ACKSISSRKLINRD--DVEDVRREVQIMHHLTGHRNIVELKGAY--------EDRHSVNL 145
K ++ +K++ D V+ RE++I+ L H NIV++ ED S+
Sbjct: 29 CDKRVAVKKIVLTDPQSVKHALREIKIIRRLD-HDNIVKVYEVLGPSGSDLTEDVGSLTE 87
Query: 146 IMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLF 201
+ + E + ++ +G SE A Q++ + Y HS V+HRDLKP N
Sbjct: 88 LNSVYIVQEYMETDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFI 147
Query: 202 SSSAEDSPLKATDFGLSVFFKP-----GDVFKDLVGSAYYVAPEVL--RRNYGAEADIWS 254
++ ED LK DFGL+ P G + + LV + +Y +P +L NY D+W+
Sbjct: 148 NT--EDLVLKIGDFGLARIVDPHYSHKGYLSEGLV-TKWYRSPRLLLSPNNYTKAIDMWA 204
Query: 255 AGVILYILLSGVPPFWGETE----QSIFDAI------------------LRGHIDFSSDP 292
AG I +L+G P F G E Q I +++ +R P
Sbjct: 205 AGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRP 264
Query: 293 W----PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKP 337
P ++ A D ++++L +P +RL+A E L HP+M D+P
Sbjct: 265 LRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCYSCPFDEP 313
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342 |
| >gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Score = 99.8 bits (248), Expect = 4e-23
Identities = 71/257 (27%), Positives = 114/257 (44%), Gaps = 15/257 (5%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
RE+G G FG Y T + A K +S + + +D+ +EV+ + + H N +E
Sbjct: 31 REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIK-HPNSIE 89
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
KG Y H+ L+M+ C G + K E A + + + Y HS ++HR
Sbjct: 90 YKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHR 149
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL----RRNYGA 248
D+K N L + E +K DFG + P + F VG+ Y++APEV+ Y
Sbjct: 150 DIKAGNILLT---EPGQVKLADFGSASIASPANSF---VGTPYWMAPEVILAMDEGQYDG 203
Query: 249 EADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI-DFSSDPWPNISSSAKDIVKKM 307
+ D+WS G+ L PP + S I + S+ W S ++ V
Sbjct: 204 KVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEW---SDYFRNFVDSC 260
Query: 308 LHADPKERLSAAEVLNH 324
L P++R ++ E+L H
Sbjct: 261 LQKIPQDRPTSEELLKH 277
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317 |
| >gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Score = 97.2 bits (243), Expect = 1e-22
Identities = 68/256 (26%), Positives = 117/256 (45%), Gaps = 19/256 (7%)
Query: 78 GQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIM-HHLTG-HRNIVELKG 135
G+FG ++ HK T++ F K I ++ ++ M H L + N ++L
Sbjct: 27 GKFGKVSVLKHKPTQKLFVQKIIKAKNF----------NAIEPMVHQLMKDNPNFIKLYY 76
Query: 136 AYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLK 195
+ LIMD G+LFD + +G SE + RQ+V ++ H ++H D+K
Sbjct: 77 SVTTLKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIK 136
Query: 196 PENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEADIWS 254
EN L+ + + + D+GL K G+ Y +PE + NY D W+
Sbjct: 137 LENVLYDRAKDR--IYLCDYGLC---KIIGTPSCYDGTLDYFSPEKIKGHNYDVSFDWWA 191
Query: 255 AGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKE 314
GV+ Y LL+G PF + ++ + L N+S +A D V+ ML +
Sbjct: 192 VGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINY 251
Query: 315 RLSA-AEVLNHPWMRV 329
RL+ E++ HP++++
Sbjct: 252 RLTNYNEIIKHPFLKI 267
|
Length = 267 |
| >gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Score = 96.9 bits (241), Expect = 2e-22
Identities = 74/266 (27%), Positives = 122/266 (45%), Gaps = 30/266 (11%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG V K+T + +ACK + ++L + + E +I+ + IV L
Sbjct: 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNS-PFIVNLA 59
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYC---------- 184
A+E + + L+M L GG+L I + ER +M V+HY
Sbjct: 60 YAFESKTHLCLVMSLMNGGDLKYHIY---NVGERGL-----EMERVIHYSAQITCGILHL 111
Query: 185 HSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR 244
HSM +++RD+KPEN L + +D GL+V K G G+ Y+APE+L+
Sbjct: 112 HSMDIVYRDMKPENVLLDDQGN---CRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKE 168
Query: 245 N-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR----GHIDFSSDPWPNISSS 299
Y D ++ G +Y +++G PF E+ + + R + F N +
Sbjct: 169 EPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQ---NFTEE 225
Query: 300 AKDIVKKMLHADPKERLSAAEVLNHP 325
+KDI + L P++RL + E + P
Sbjct: 226 SKDICRLFLAKKPEDRLGSREKNDDP 251
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277 |
| >gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Score = 97.2 bits (242), Expect = 2e-22
Identities = 84/305 (27%), Positives = 126/305 (41%), Gaps = 65/305 (21%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGH 127
++G G +GV Y + T + A K I R + ED RE+ ++ + H
Sbjct: 9 KIGEGTYGVVYKARDRVTNETIALKKI-------RLEQEDEGVPSTAIREISLLKEMQ-H 60
Query: 128 RNIVELKGAYEDRHSVNLI-----------MDLCAGGELFDRIIAKGHYSERAAANLCRQ 176
NIV L+ + L+ MD R+I Y Q
Sbjct: 61 GNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLY----------Q 110
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAY 235
++ + YCHS V+HRDLKP+N L + LK DFGL+ F P F V + +
Sbjct: 111 ILRGIAYCHSHRVLHRDLKPQNLLIDRRT--NALKLADFGLARAFGIPVRTFTHEVVTLW 168
Query: 236 YVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPW 293
Y APE+L R+Y DIWS G I +++ P F G++E I R + + W
Sbjct: 169 YRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETW 228
Query: 294 PNISS-------------------------SAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
P ++S + D++ KML DP +R++A L H + +
Sbjct: 229 PGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFK 288
Query: 329 VDGDA 333
GDA
Sbjct: 289 DLGDA 293
|
Length = 294 |
| >gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Score = 96.7 bits (241), Expect = 2e-22
Identities = 78/288 (27%), Positives = 125/288 (43%), Gaps = 46/288 (15%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR----REVQIMHHLTGHRN 129
++G G +G + +++T + A K + DD E V RE+ ++ L H+N
Sbjct: 7 KIGEGTYGTVFKAKNRETHEIVALKRVRLD-----DDDEGVPSSALREICLLKELK-HKN 60
Query: 130 IVELKGAYEDRHSVNLIMDLCAGG--ELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM 187
IV L + L+ + C + FD G + Q++ + +CHS
Sbjct: 61 IVRLYDVLHSDKKLTLVFEYCDQDLKKYFDSC--NGDIDPEIVKSFMFQLLKGLAFCHSH 118
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLVGSAYYVAPEVL--RR 244
V+HRDLKP+N L + + E LK DFGL+ F P + V + +Y P+VL +
Sbjct: 119 NVLHRDLKPQNLLINKNGE---LKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAK 175
Query: 245 NYGAEADIWSAGVILYILL-SGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS------ 297
Y D+WSAG I L +G P F G I R + + WP +S
Sbjct: 176 LYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYK 235
Query: 298 -------------------SSAKDIVKKMLHADPKERLSAAEVLNHPW 326
S+ +D+++ +L +P +R+SA E L HP+
Sbjct: 236 PYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPY 283
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284 |
| >gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Score = 97.6 bits (244), Expect = 3e-22
Identities = 85/310 (27%), Positives = 129/310 (41%), Gaps = 81/310 (26%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSI--SSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
++LG+G +G+ + + TK+ A K I + R N D + RE+ + L H NI
Sbjct: 13 QKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFR---NATDAQRTFREIMFLQELGDHPNI 69
Query: 131 VELKGAYE----------------DRHSV---NLIMDLCAGGELFDRIIAKGHYSERAAA 171
V+L + D H+V N++ D+ R I Y
Sbjct: 70 VKLLNVIKAENDKDIYLVFEYMETDLHAVIRANILEDV------HKRYIM---Y------ 114
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD------ 225
Q++ + Y HS V+HRDLKP N L +S D +K DFGL+ +
Sbjct: 115 ----QLLKALKYIHSGNVIHRDLKPSNILLNS---DCRVKLADFGLARSLSELEENPENP 167
Query: 226 VFKDLVGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWG------------ 271
V D V + +Y APE+L Y D+WS G IL +L G P F G
Sbjct: 168 VLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIE 227
Query: 272 --------ETEQ-------SIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERL 316
+ E ++ D++ + P S A D++KK+L +P +RL
Sbjct: 228 VIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRL 287
Query: 317 SAAEVLNHPW 326
+A E L HP+
Sbjct: 288 TAEEALEHPY 297
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337 |
| >gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Score = 96.3 bits (239), Expect = 3e-22
Identities = 82/280 (29%), Positives = 126/280 (45%), Gaps = 33/280 (11%)
Query: 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
P ED + + +G G +G Y + +T + A K I KL +D V++E+ I
Sbjct: 7 PQED----FELIQRIGSGTYGDVYKARNVNTGELAAIKVI---KLEPGEDFAVVQQEI-I 58
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTV 180
M H NIV G+Y R + + M+ C GG L D G SE A + R+ +
Sbjct: 59 MMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQG 118
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV-FKDLVGSAYYVAP 239
++Y HS G MHRD+K N L + ++ +K DFG+S K +G+ Y++AP
Sbjct: 119 LYYLHSKGKMHRDIKGANILLT---DNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAP 175
Query: 240 EVL----RRNYGAEADIWSAGVILYILLSGVPPFWG---------ETEQSIFDAILRGHI 286
EV + Y DIW+ G+ L PP + T+ + L+ +
Sbjct: 176 EVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKM 235
Query: 287 DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
W N S VK L +PK+R +A ++L HP+
Sbjct: 236 K-----WSN---SFHHFVKMALTKNPKKRPTAEKLLQHPF 267
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267 |
| >gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Score = 96.3 bits (239), Expect = 5e-22
Identities = 76/299 (25%), Positives = 127/299 (42%), Gaps = 31/299 (10%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
RE+G G FG Y + A K +S + + +D+ +EV+ + L H N ++
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQ 79
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
+G Y H+ L+M+ C G + K E A + + + Y HS ++HR
Sbjct: 80 YRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHR 139
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL----RRNYGA 248
D+K N L S E +K DFG + P + F VG+ Y++APEV+ Y
Sbjct: 140 DVKAGNILLS---EPGLVKLGDFGSASIMAPANXF---VGTPYWMAPEVILAMDEGQYDG 193
Query: 249 EADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID-FSSDPWPNISSSAKDIVKKM 307
+ D+WS G+ L PP + S I + S W S ++ V
Sbjct: 194 KVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---SEYFRNFVDSC 250
Query: 308 LHADPKERLSAAEVLNHPWMRVDGDASDKPLDI--AVLTRMK---------QFRAMNKL 355
L P++R ++ +L H ++ ++P + ++ R K Q+R M K+
Sbjct: 251 LQKIPQDRPTSEVLLKHRFVL-----RERPPTVIMDLIQRTKDAVRELDNLQYRKMKKI 304
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308 |
| >gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Score = 95.1 bits (236), Expect = 6e-22
Identities = 66/251 (26%), Positives = 124/251 (49%), Gaps = 14/251 (5%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+++GRGQF Y T A K + L++ D +E+ ++ L H N+++
Sbjct: 8 KKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN-HPNVIK 66
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRII-----AKGHYSERAAANLCRQMVTVVHYCHSM 187
++ + + +N++++L G+L R+I K E+ Q+ + + + HS
Sbjct: 67 YYASFIEDNELNIVLELADAGDL-SRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR 125
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV-FKDLVGSAYYVAPEVLRRN- 245
VMHRD+KP N +++ +K D GL FF LVG+ YY++PE + N
Sbjct: 126 RVMHRDIKPANVFITATG---VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENG 182
Query: 246 YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR-GHIDFSSDPWPNISSSAKDIV 304
Y ++DIWS G +LY + + PF+G+ + +++ + D+ P + S + +V
Sbjct: 183 YNFKSDIWSLGCLLYEMAALQSPFYGD-KMNLYSLCKKIEQCDYPPLPSDHYSEELRQLV 241
Query: 305 KKMLHADPKER 315
++ DP++R
Sbjct: 242 NMCINPDPEKR 252
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 94.5 bits (236), Expect = 8e-22
Identities = 64/282 (22%), Positives = 118/282 (41%), Gaps = 52/282 (18%)
Query: 73 RELGRGQFGVTY---LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN 129
++LG G FG Y L + A K++ + ++ +D +E ++M L GH N
Sbjct: 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDA--SEEERKDFLKEARVMKKL-GHPN 57
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERA-------------AANLCRQ 176
+V L G + + L+++ GG+L D + A + +
Sbjct: 58 VVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKG 117
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYY 236
M Y S +HRDL N L ED +K +DFGLS +D+ YY
Sbjct: 118 M----EYLASKKFVHRDLAARNCLVG---EDLVVKISDFGLS---------RDVYDDDYY 161
Query: 237 V------------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAIL 282
APE L+ + +++D+WS GV+L+ + + G P+ G + + + + +
Sbjct: 162 RKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLR 221
Query: 283 RGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324
+G+ P +++ DP++R + +E++
Sbjct: 222 KGY--RLPKP-EYCPDELYELMLSCWQLDPEDRPTFSELVER 260
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Score = 95.5 bits (237), Expect = 1e-21
Identities = 70/251 (27%), Positives = 130/251 (51%), Gaps = 28/251 (11%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH-RNIVEL 133
+GRG FG +V K T++ +A K ++ +++ R + R E ++ + G + I L
Sbjct: 9 IGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVL--VNGDCQWITTL 66
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR----QMVTVVHYCHSMGV 189
A++D + + L+MD GG+L +++K + +R ++ R +MV +H H +
Sbjct: 67 HYAFQDENYLYLVMDYYVGGDLLT-LLSK--FEDRLPEDMARFYIAEMVLAIHSIHQLHY 123
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDL-VGSAYYVAPEVLRR--- 244
+HRD+KP+N L + ++ DFG + + G V + VG+ Y++PE+L+
Sbjct: 124 VHRDIKPDNVLLDMNGH---IRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMED 180
Query: 245 ---NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP----NIS 297
YG E D WS GV +Y +L G PF+ E+ + I+ F +P ++S
Sbjct: 181 GMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQ---FPSHITDVS 237
Query: 298 SSAKDIVKKML 308
AKD++++++
Sbjct: 238 EEAKDLIQRLI 248
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331 |
| >gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 95.0 bits (237), Expect = 2e-21
Identities = 83/315 (26%), Positives = 125/315 (39%), Gaps = 72/315 (22%)
Query: 76 GRGQFGVTYLVTHKD--TKQQFACKSISSRKLINRDDVEDVR----REVQIMHHLTGHRN 129
GRG +G Y K+ +++A K K + + RE+ ++ L H N
Sbjct: 9 GRGTYGRVYKAKRKNGKDGKEYAIKKFKGDK----EQYTGISQSACREIALLRELK-HEN 63
Query: 130 IVELKGAYEDRH--SVNLIMDLCAGGELFDRIIAKGHYSERAAA-------NLCRQMVTV 180
+V L + + SV L+ D A +L+ I K H + + +L Q++
Sbjct: 64 VVSLVEVFLEHADKSVYLLFDY-AEHDLWQ--IIKFHRQAKRVSIPPSMVKSLLWQILNG 120
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSA-EDSPLKATDFGLS-VFFKPGDVFKDL---VGSAY 235
VHY HS V+HRDLKP N L E +K D GL+ +F P DL V + +
Sbjct: 121 VHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIW 180
Query: 236 YVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETE-------------QSIF-- 278
Y APE+L R+Y DIW+ G I LL+ P F G + IF
Sbjct: 181 YRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEV 240
Query: 279 ----------------------DAILRGHIDFSS-----DPWPNISSSAKDIVKKMLHAD 311
+S + S D+++K+L D
Sbjct: 241 LGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYD 300
Query: 312 PKERLSAAEVLNHPW 326
P +R++A E L HP+
Sbjct: 301 PTKRITAEEALEHPY 315
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316 |
| >gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Score = 95.1 bits (236), Expect = 2e-21
Identities = 67/250 (26%), Positives = 126/250 (50%), Gaps = 26/250 (10%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+GRG FG +V K+ + FA K ++ +++ R + R E ++ + ++ I L
Sbjct: 9 IGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN-GDNQWITTLH 67
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR----QMVTVVHYCHSMGVM 190
A++D +++ L+MD GG+L + + +R ++ R +MV + H + +
Sbjct: 68 YAFQDENNLYLVMDYYVGGDLLTLL---SKFEDRLPEDMARFYLAEMVIAIDSVHQLHYV 124
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDL-VGSAYYVAPEVL------ 242
HRD+KP+N L + ++ DFG + + G V + VG+ Y++PE+L
Sbjct: 125 HRDIKPDNILMDMNGH---IRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDG 181
Query: 243 RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP----NISS 298
+ YG E D WS GV +Y +L G PF+ E+ + I+ F +P ++S
Sbjct: 182 KGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQ---FPAQVTDVSE 238
Query: 299 SAKDIVKKML 308
AKD++++++
Sbjct: 239 DAKDLIRRLI 248
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332 |
| >gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 95.9 bits (238), Expect = 4e-21
Identities = 69/212 (32%), Positives = 108/212 (50%), Gaps = 18/212 (8%)
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA--KGH--YSERAAANLCRQMVTVVH 182
H IV+ ++ + LIM+ +GG+L +I K H + E L Q+V +
Sbjct: 124 HFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALD 183
Query: 183 YCHSMGVMHRDLKPEN-FLFSSSAEDSPLKATDFGLSVFFKPG---DVFKDLVGSAYYVA 238
HS +MHRDLK N FL + +K DFG S + DV G+ YY+A
Sbjct: 184 EVHSRKMMHRDLKSANIFLMPTGI----IKLGDFGFSKQYSDSVSLDVASSFCGTPYYLA 239
Query: 239 PEVL-RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP-NI 296
PE+ R+ Y +AD+WS GVILY LL+ PF G +++ I +L G DP+P +
Sbjct: 240 PELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKY----DPFPCPV 295
Query: 297 SSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
SS K ++ +L +P R + ++L+ +++
Sbjct: 296 SSGMKALLDPLLSKNPALRPTTQQLLHTEFLK 327
|
Length = 478 |
| >gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 92.9 bits (231), Expect = 5e-21
Identities = 77/294 (26%), Positives = 130/294 (44%), Gaps = 48/294 (16%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR----REVQIMHHLTGHR 128
+LG G G V H T ++ ++K+++ VR RE+QIMH
Sbjct: 11 SDLGAGNGGSVSKVKHIPTG------TVMAKKVVHIGAKSSVRKQILRELQIMHECRSP- 63
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMV---TVVHYC 184
IV GA+ + +++ + M+ G L DRI K G + +V T ++
Sbjct: 64 YIVSFYGAFLNENNICMCMEFMDCGSL-DRIYKKGGPIPVEILGKIAVAVVEGLTYLYNV 122
Query: 185 HSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS--VFFKPGDVFKDLVGSAYYVAPEVL 242
H +MHRD+KP N L +S + +K DFG+S + D F VG++ Y++PE +
Sbjct: 123 HR--IMHRDIKPSNILVNSRGQ---IKLCDFGVSGELINSIADTF---VGTSTYMSPERI 174
Query: 243 R-RNYGAEADIWSAGVILYILLSGVPPF-------WGETEQ-SIFDAILRGHIDFSSDPW 293
+ Y ++D+WS G+ + L G PF G+ + I D + + +P
Sbjct: 175 QGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQ----IVQEPP 230
Query: 294 PNISSS-----AKDIVKKMLHADPKERLSAAEVL-NHPWMRVDGDASDKPLDIA 341
P + SS +D V L DP ER + ++ P+++ +D+
Sbjct: 231 PRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQAL---RASNVDLQ 281
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 92.4 bits (229), Expect = 6e-21
Identities = 72/257 (28%), Positives = 124/257 (48%), Gaps = 16/257 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+G+G FG Y TK+ A K I + D++ED+++E+ ++ I
Sbjct: 12 IGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPY-ITRYY 68
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
G+Y + +IM+ GG D ++ G E A + R+++ + Y HS +HRD+
Sbjct: 69 GSYLKGTKLWIIMEYLGGGSALD-LLKPGPLEETYIATILREILKGLDYLHSERKIHRDI 127
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEVLRRN-YGAEADI 252
K N L S E +K DFG++ + ++ VG+ +++APEV++++ Y +ADI
Sbjct: 128 KAANVLLS---EQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADI 184
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP--WPNISSSAKDIVKKMLHA 310
WS G+ L G PP + I + +S P S K+ V+ L+
Sbjct: 185 WSLGITAIELAKGEPPNSDLHPMRVLFLIPK-----NSPPTLEGQYSKPFKEFVEACLNK 239
Query: 311 DPKERLSAAEVLNHPWM 327
DP+ R +A E+L H ++
Sbjct: 240 DPRFRPTAKELLKHKFI 256
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 92.7 bits (230), Expect = 1e-20
Identities = 88/322 (27%), Positives = 139/322 (43%), Gaps = 59/322 (18%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
+ K + ++ Y +++G G +G K T ++ A K +S R + + RE
Sbjct: 6 VNKTVWELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLS-RPFQSEIFAKRAYRE 64
Query: 118 VQIMHHLTGHRNIVEL------KGAYEDRHSVNLIM-----DLCAGGELFDRIIAKGHYS 166
+ ++ H+ H N++ L + ++ L+M DL + I S
Sbjct: 65 LTLLKHMQ-HENVIGLLDVFTSAVSGDEFQDFYLVMPYMQTDL--------QKIMGHPLS 115
Query: 167 ERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226
E L QM+ + Y HS G++HRDLKP N + ED LK DFGL+ + D
Sbjct: 116 EDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVN---EDCELKILDFGLA---RHADA 169
Query: 227 -FKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWG------------ 271
V + +Y APEV+ +Y DIWS G I+ +L+G F G
Sbjct: 170 EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILK 229
Query: 272 -------ETEQSIFDAILRGHI---------DFSSDPWPNISSSAKDIVKKMLHADPKER 315
E Q + D + +I DFS+ +P S A D+++KML D +R
Sbjct: 230 VTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFST-LFPKASPQAVDLLEKMLELDVDKR 288
Query: 316 LSAAEVLNHPWMRVDGDASDKP 337
L+A E L HP+ DA ++
Sbjct: 289 LTATEALEHPYFDSFRDADEET 310
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342 |
| >gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Score = 91.2 bits (226), Expect = 2e-20
Identities = 78/264 (29%), Positives = 124/264 (46%), Gaps = 25/264 (9%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G +G Y + T + A K I KL DD +++E+ ++ H NIV
Sbjct: 15 QRVGSGTYGDVYKARNLHTGELAAVKII---KLEPGDDFSLIQQEIFMVKECK-HCNIVA 70
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
G+Y R + + M+ C GG L D G SE A +CR+ + + Y HS G MHR
Sbjct: 71 YFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHR 130
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV-FKDLVGSAYYVAPEV--LRRN--YG 247
D+K N L + + + +K DFG++ K +G+ Y++APEV + +N Y
Sbjct: 131 DIKGANILLTDNGD---VKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYN 187
Query: 248 AEADIWSAGVILYILLSGVPPFWG-ETEQSIFDAILRGHIDFSSDPWPNI------SSSA 300
DIW+ G+ L PP + +++F L +F P + SS+
Sbjct: 188 QLCDIWAVGITAIELAELQPPMFDLHPMRALF---LMSKSNFQP---PKLKDKTKWSSTF 241
Query: 301 KDIVKKMLHADPKERLSAAEVLNH 324
+ VK L +PK+R +A +L H
Sbjct: 242 HNFVKISLTKNPKKRPTAERLLTH 265
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 91.1 bits (226), Expect = 2e-20
Identities = 71/269 (26%), Positives = 124/269 (46%), Gaps = 23/269 (8%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG + T + +ACK ++ ++L R E E +I+ + R IV L
Sbjct: 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHS-RFIVSLA 59
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGH----YSERAAANLCRQMVTVVHYCHSMGVM 190
A++ + + L+M + GG+L I + E A Q+++ + + H ++
Sbjct: 60 YAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRII 119
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG-DVFKDLVGSAYYVAPEVLR-RNYGA 248
+RDLKPEN L D ++ +D GL+V K G K G+ ++APE+L+ Y
Sbjct: 120 YRDLKPENVLLD---NDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDF 176
Query: 249 EADIWSAGVILYILLSGVPPFWGETE----QSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
D ++ GV LY +++ PF E + + IL + + S ++K
Sbjct: 177 SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPD----KFSPASKSFC 232
Query: 305 KKMLHADPKERL-----SAAEVLNHPWMR 328
+ +L DP++RL + + HP R
Sbjct: 233 EALLAKDPEKRLGFRDGNCDGLRTHPLFR 261
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Score = 91.2 bits (226), Expect = 2e-20
Identities = 83/291 (28%), Positives = 122/291 (41%), Gaps = 46/291 (15%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVE-DVRREVQIMHHLTG--HRNI 130
E+G G +G Y + A KS+ R N D + REV ++ L H NI
Sbjct: 7 EIGVGAYGTVYKARDPHSGHFVALKSV--RVQTNEDGLPLSTVREVALLKRLEAFDHPNI 64
Query: 131 VEL----KGAYEDRHS-VNLIM-----DLCAGGELFDRIIAKGHYSERAAANLCRQMVTV 180
V L + DR + V L+ DL D++ G +E +L RQ +
Sbjct: 65 VRLMDVCATSRTDRETKVTLVFEHVDQDLRT---YLDKVPPPGLPAETIK-DLMRQFLRG 120
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE 240
+ + H+ ++HRDLKPEN L +S + +K DFGL+ + +V + +Y APE
Sbjct: 121 LDFLHANCIVHRDLKPENILVTSGGQ---VKLADFGLARIYSCQMALTPVVVTLWYRAPE 177
Query: 241 V-LRRNYGAEADIWSAGVILYILLSGVPPFWGETEQ----SIFDAI------------LR 283
V L+ Y D+WS G I + P F G +E IFD I
Sbjct: 178 VLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTL 237
Query: 284 GHIDFS-------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
FS P I S ++ +ML +P +R+SA L HP+
Sbjct: 238 PRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288 |
| >gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Score = 91.2 bits (227), Expect = 2e-20
Identities = 74/316 (23%), Positives = 122/316 (38%), Gaps = 73/316 (23%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVE----DVRREVQIMHHL 124
Y +LG G FG Y T + A K K++ ++ + RE++I+ L
Sbjct: 10 YEILGKLGEGTFGEVYKARQIKTGRVVALK-----KILMHNEKDGFPITALREIKILKKL 64
Query: 125 TGHRNIVEL--------KGAYEDRHSVNLIM-----DLCAGGELFDRIIAKGHYSERAAA 171
H N+V L + R SV ++ DL G L + + +E
Sbjct: 65 K-HPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLS--GLLENPSV---KLTESQIK 118
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFK-- 228
Q++ ++Y H ++HRD+K N L + LK DFGL+ + P K
Sbjct: 119 CYMLQLLEGINYLHENHILHRDIKAANILIDNQGI---LKIADFGLARPYDGPPPNPKGG 175
Query: 229 ---------DLVGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETE--- 274
+LV + +Y PE+L R Y DIW G + + + P G+++
Sbjct: 176 GGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQ 235
Query: 275 -QSIFDAI----------------LRGHIDFSSDPWPNISSSAK-------DIVKKMLHA 310
IF G F++ P + D++ K+L
Sbjct: 236 LHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYP-RTLEERFGKLGPEGLDLLSKLLSL 294
Query: 311 DPKERLSAAEVLNHPW 326
DP +RL+A++ L HP+
Sbjct: 295 DPYKRLTASDALEHPY 310
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311 |
| >gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Score = 90.5 bits (224), Expect = 3e-20
Identities = 67/257 (26%), Positives = 125/257 (48%), Gaps = 16/257 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+G+G FG + T+Q A K I + D++ED+++E+ ++ + +
Sbjct: 12 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPY-VTKYY 68
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
G+Y + +IM+ GG D ++ G + E A + ++++ + Y HS +HRD+
Sbjct: 69 GSYLKGTKLWIIMEYLGGGSALD-LLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDI 127
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEVLRRN-YGAEADI 252
K N L S E +K DFG++ + ++ VG+ +++APEV++++ Y ++ADI
Sbjct: 128 KAANVLLS---EQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADI 184
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPW--PNISSSAKDIVKKMLHA 310
WS G+ L G PP + + I ++ P S K+ + L+
Sbjct: 185 WSLGITAIELAKGEPP-----NSDMHPMRVLFLIPKNNPPTLTGEFSKPFKEFIDACLNK 239
Query: 311 DPKERLSAAEVLNHPWM 327
DP R +A E+L H ++
Sbjct: 240 DPSFRPTAKELLKHKFI 256
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 89.8 bits (222), Expect = 5e-20
Identities = 67/256 (26%), Positives = 125/256 (48%), Gaps = 12/256 (4%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
++G+G FG + T++ A K I + D++ED+++E+ ++ + +
Sbjct: 11 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPY-VTKY 67
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRD 193
G+Y + +IM+ GG D ++ G E A + R+++ + Y HS +HRD
Sbjct: 68 YGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRD 126
Query: 194 LKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEVLRRN-YGAEAD 251
+K N L S E +K DFG++ + ++ VG+ +++APEV++++ Y ++AD
Sbjct: 127 IKAANVLLSEHGE---VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKAD 183
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
IWS G+ L G PP + I + + N S K+ V+ L+ +
Sbjct: 184 IWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPPTLEG---NYSKPLKEFVEACLNKE 240
Query: 312 PKERLSAAEVLNHPWM 327
P R +A E+L H ++
Sbjct: 241 PSFRPTAKELLKHKFI 256
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 89.4 bits (222), Expect = 7e-20
Identities = 74/273 (27%), Positives = 106/273 (38%), Gaps = 50/273 (18%)
Query: 71 FGRELGRGQFGVTYLVTHK----DTKQQFACKSISSRKLINRDDVE----DVRREVQIMH 122
F ++LG G FG L + +T +Q A KS+ N E D RE++I+
Sbjct: 8 FIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSL------NHSGEEQHRSDFEREIEILR 61
Query: 123 HLTGHRNIVELKGAYEDRH--SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR---QM 177
L H NIV+ KG E S+ LIM+ G L R + H + L Q+
Sbjct: 62 TLD-HENIVKYKGVCEKPGGRSLRLIMEYLPSGSL--RDYLQRHRDQINLKRLLLFSSQI 118
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGS- 233
+ Y S +HRDL N L S + +K +DFGL+ K+ S
Sbjct: 119 CKGMDYLGSQRYIHRDLAARNILVES---EDLVKISDFGLAKVLPEDKDYYYVKEPGESP 175
Query: 234 AYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292
++ APE LR + + +D+WS GV LY L + + D S P
Sbjct: 176 IFWYAPECLRTSKFSSASDVWSFGVTLYELFT--------------------YGDPSQSP 215
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
+M+ E L E L P
Sbjct: 216 PAEFLRMIGIAQGQMIVTRLLELLKEGERLPRP 248
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Score = 89.0 bits (220), Expect = 8e-20
Identities = 68/273 (24%), Positives = 126/273 (46%), Gaps = 34/273 (12%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+G G +G Y H T Q A K + + D+ E++++E+ ++ + HRNI
Sbjct: 14 VGNGTYGQVYKGRHVKTGQLAAIKVMD----VTGDEEEEIKQEINMLKKYSHHRNIATYY 69
Query: 135 GAYEDRH------SVNLIMDLCAGGELFDRII-AKGH-YSERAAANLCRQMVTVVHYCHS 186
GA+ ++ + L+M+ C G + D I KG+ E A +CR+++ + + H
Sbjct: 70 GAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ 129
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF-KPGDVFKDLVGSAYYVAPEVLR-- 243
V+HRD+K +N L + +AE +K DFG+S + +G+ Y++APEV+
Sbjct: 130 HKVIHRDIKGQNVLLTENAE---VKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACD 186
Query: 244 ----RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299
Y ++D+WS G+ + G PP I R +P P + S
Sbjct: 187 ENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR-------NPAPRLKSK 239
Query: 300 A-----KDIVKKMLHADPKERLSAAEVLNHPWM 327
+ ++ L + +R + +++ HP++
Sbjct: 240 KWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272 |
| >gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Score = 89.0 bits (221), Expect = 3e-19
Identities = 85/303 (28%), Positives = 123/303 (40%), Gaps = 78/303 (25%)
Query: 91 TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLC 150
T Q A K +S R N + RE+ +M L H+NI+ L + + S+ D+
Sbjct: 40 TGQNVAIKKLS-RPFQNVTHAKRAYRELVLMK-LVNHKNIIGLLNVFTPQKSLEEFQDVY 97
Query: 151 AGGELFDRIIAKGHYSERAAANLCR----------------QMVTVVHYCHSMGVMHRDL 194
EL D ANLC+ QM+ + + HS G++HRDL
Sbjct: 98 LVMELMD-------------ANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDL 144
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF--KDLVGSAYYVAPEV-LRRNYGAEAD 251
KP N + S D LK DFGL+ G F V + YY APEV L Y D
Sbjct: 145 KPSNIVVKS---DCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 199
Query: 252 IWSAGVILYILLSGVPPF--------W-------GETEQSIFDAI---LRGHID------ 287
IWS G I+ ++ G F W G + +R +++
Sbjct: 200 IWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYA 259
Query: 288 -------FSSDPWPNISSS--------AKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332
F +P S S A+D++ KML DP++R+S + L HP++ V D
Sbjct: 260 GYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVWYD 319
Query: 333 ASD 335
S+
Sbjct: 320 PSE 322
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353 |
| >gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 89.0 bits (220), Expect = 3e-19
Identities = 85/315 (26%), Positives = 134/315 (42%), Gaps = 44/315 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G +Q+ A K +S R + RE
Sbjct: 6 LNKTVWEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLS-RPFQSLIHARRTYRE 64
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ +L G +L + I+ S+
Sbjct: 65 LRLLKHMK-HENVIGLLDVFTPATSIENFNEVYLVTNL-MGADL-NNIVKCQKLSDEHVQ 121
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS G++HRDLKP N + ED L+ DFGL+ + D V
Sbjct: 122 FLIYQLLRGLKYIHSAGIIHRDLKPSNVAVN---EDCELRILDFGLAR--QADDEMTGYV 176
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL G F G I+ S
Sbjct: 177 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPS 236
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
+ ISS A D+++KML D +R+SA+E L
Sbjct: 237 PEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEAL 296
Query: 323 NHPWMRVDGDASDKP 337
HP+ D D+P
Sbjct: 297 AHPYFSQYHDPEDEP 311
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343 |
| >gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 87.8 bits (218), Expect = 3e-19
Identities = 85/313 (27%), Positives = 122/313 (38%), Gaps = 82/313 (26%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR--REVQIMHHLT 125
TY +LG G + Y K T Q A K I + ++ RE ++ L
Sbjct: 6 TYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIR----LEHEEGAPFTAIREASLLKDLK 61
Query: 126 GHRNIVELKGAYEDRHSVNLI-----------MDLCAGG------ELFDRIIAKGHYSER 168
H NIV L + ++ L+ MD C GG LF
Sbjct: 62 -HANIVTLHDIIHTKKTLTLVFEYLDTDLKQYMDDCGGGLSMHNVRLF------------ 108
Query: 169 AAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL----SVFFKPG 224
Q++ + YCH V+HRDLKP+N L S E LK DFGL SV P
Sbjct: 109 -----LFQLLRGLAYCHQRRVLHRDLKPQNLLISERGE---LKLADFGLARAKSV---PS 157
Query: 225 DVFKDLVGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETE-QSIFDAI 281
+ + V + +Y P+VL Y D+W G I Y + +G P F G T+ + I
Sbjct: 158 KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKI 217
Query: 282 LRGHIDFSSDPWPNISS----------------------------SAKDIVKKMLHADPK 313
R + + WP +SS +++ K L +PK
Sbjct: 218 FRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPK 277
Query: 314 ERLSAAEVLNHPW 326
+R+SAAE + HP+
Sbjct: 278 KRISAAEAMKHPY 290
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291 |
| >gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 88.3 bits (219), Expect = 4e-19
Identities = 82/306 (26%), Positives = 132/306 (43%), Gaps = 53/306 (17%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+G+G +GV T ++ A K I+ + D + RE++++ L H +IVE+K
Sbjct: 8 IGKGSYGVVCSAIDTHTGEKVAIKKIND-VFEHVSDATRILREIKLLRLLR-HPDIVEIK 65
Query: 135 G--------AYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
++D + V +M+ +L I A + Q++ + Y H+
Sbjct: 66 HIMLPPSRREFKDIYVVFELME----SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHT 121
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFK--PGDVF-KDLVGSAYYVAPEV- 241
V HRDLKP+N L ++ D LK DFGL+ V F P +F D V + +Y APE+
Sbjct: 122 ANVFHRDLKPKNILANA---DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 178
Query: 242 --LRRNYGAEADIWSAGVILYILLSGVPPFWG-------------------ETEQSIFDA 280
Y DIWS G I +L+G P F G ET + +
Sbjct: 179 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNE 238
Query: 281 ILRGH---------IDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331
R + + FS +PN A +++++L DPK+R +A E L P+ +
Sbjct: 239 KARRYLSSMRKKQPVPFSQK-FPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLA 297
Query: 332 DASDKP 337
+P
Sbjct: 298 KVEREP 303
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338 |
| >gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Score = 87.8 bits (218), Expect = 5e-19
Identities = 85/324 (26%), Positives = 131/324 (40%), Gaps = 66/324 (20%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISS---------RKLINRDDVEDV 114
DV + Y +G G +GV + ++ A K I R L
Sbjct: 2 DVGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTL--------- 52
Query: 115 RREVQIMHHLTGHRNIVELKGAY----EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAA 170
RE++I+ H H NI+ ++ D V ++MDL +L I + +E
Sbjct: 53 -RELKILRHFK-HDNIIAIRDILRPPGADFKDVYVVMDL-MESDLHHIIHSDQPLTEEHI 109
Query: 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL--SVFFKPGDV-- 226
Q++ + Y HS V+HRDLKP N L + E L+ DFG+ + P +
Sbjct: 110 RYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCE---LRIGDFGMARGLSSSPTEHKY 166
Query: 227 -FKDLVGSAYYVAPEVL--RRNYGAEADIWSAGVI-------------------LYILLS 264
+ V + +Y APE+L Y D+WS G I L ++LS
Sbjct: 167 FMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILS 226
Query: 265 --GVPPFWGETEQSIFDAILRGHI-DFSSD---PW----PNISSSAKDIVKKMLHADPKE 314
G P E I +R +I + PW P S A D++ +ML DP+E
Sbjct: 227 VLGSPS--EEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEE 284
Query: 315 RLSAAEVLNHPWMRVDGDASDKPL 338
R++ + L HP++ D D+P
Sbjct: 285 RITVEQALQHPFLAQYHDPDDEPT 308
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334 |
| >gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Score = 85.4 bits (211), Expect = 2e-18
Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 22/210 (10%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+G G +G Y H T Q A K + + D+ E+++ E+ ++ + HRNI
Sbjct: 24 VGNGTYGQVYKGRHVKTGQLAAIKVMD----VTEDEEEEIKLEINMLKKYSHHRNIATYY 79
Query: 135 GAYEDRHSVN------LIMDLCAGGELFDRII-AKGH-YSERAAANLCRQMVTVVHYCHS 186
GA+ + L+M+ C G + D + KG+ E A +CR+++ + + H+
Sbjct: 80 GAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHA 139
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEVLR-- 243
V+HRD+K +N L + +AE +K DFG+S ++ +G+ Y++APEV+
Sbjct: 140 HKVIHRDIKGQNVLLTENAE---VKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACD 196
Query: 244 ----RNYGAEADIWSAGVILYILLSGVPPF 269
Y +DIWS G+ + G PP
Sbjct: 197 ENPDATYDYRSDIWSLGITAIEMAEGAPPL 226
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282 |
| >gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Score = 85.0 bits (210), Expect = 2e-18
Identities = 77/268 (28%), Positives = 125/268 (46%), Gaps = 24/268 (8%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN---IV 131
+GRG FG Y DT + +A K + +K I E + +IM L + IV
Sbjct: 2 IGRGGFGEVYGCRKADTGKMYAMKCLD-KKRIKMKQGETLALNERIMLSLVSTGDCPFIV 60
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
+ A+ ++ I+DL GG+L + G +SE +++ + + H+ V++
Sbjct: 61 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVY 120
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFF---KPGDVFKDLVGSAYYVAPEVLRRN--Y 246
RDLKP N L E ++ +D GL+ F KP VG+ Y+APEVL++ Y
Sbjct: 121 RDLKPANILLD---EHGHVRISDLGLACDFSKKKP----HASVGTHGYMAPEVLQKGVAY 173
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPN-ISSSAKDIVK 305
+ AD +S G +L+ LL G PF + + I R + + + P+ S + +++
Sbjct: 174 DSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLTMAVE-LPDSFSPELRSLLE 231
Query: 306 KMLHADPKERL-----SAAEVLNHPWMR 328
+L D RL A EV HP+ R
Sbjct: 232 GLLQRDVNRRLGCLGRGAQEVKEHPFFR 259
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278 |
| >gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Score = 86.2 bits (213), Expect = 2e-18
Identities = 78/282 (27%), Positives = 121/282 (42%), Gaps = 52/282 (18%)
Query: 102 SRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFD---- 157
SR N+ + RE+ ++ H+NI+ L + + S+ D+ EL D
Sbjct: 55 SRPFQNQTHAKRAYREL-VLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLC 113
Query: 158 RIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217
++I ER + L QM+ + + HS G++HRDLKP N + S D LK DFGL
Sbjct: 114 QVIHMELDHERMSY-LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGL 169
Query: 218 SVFFKPGDVFKDLVGSAYYVAPEV-LRRNYGAEADIWSAGVILYILLSGVPPFWGETEQS 276
+ + V + YY APEV L Y DIWS G I+ L+ G F G
Sbjct: 170 ARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHID 229
Query: 277 IFDAIL------------------RGHIDFSSDPWPNIS--------------------- 297
++ ++ R +++ + +P IS
Sbjct: 230 QWNKVIEQLGTPSAEFMNRLQPTVRNYVE-NRPQYPGISFEELFPDWIFPSESERDKLKT 288
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRV--DGDASDKP 337
S A+D++ KML DP +R+S E L HP++ V D ++ P
Sbjct: 289 SQARDLLSKMLVIDPDKRISVDEALRHPYITVWYDPAEAEAP 330
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359 |
| >gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 84.7 bits (209), Expect = 4e-18
Identities = 79/301 (26%), Positives = 127/301 (42%), Gaps = 49/301 (16%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVE-DVRREVQIMHHLTG 126
TYI +LG G + Y K T A K I +L + + REV ++ L
Sbjct: 7 TYIKLDKLGEGTYATVYKGRSKLTDNLVALKEI---RLEHEEGAPCTAIREVSLLKDLK- 62
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-----GHYSERAAANL-CRQMVTV 180
H NIV L S+ L+ E D+ + + G+ L Q++
Sbjct: 63 HANIVTLHDIIHTEKSLTLVF------EYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRG 116
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLVGSAYYVAP 239
++YCH V+HRDLKP+N L + E LK DFGL+ P + + V + +Y P
Sbjct: 117 LNYCHRRKVLHRDLKPQNLLINERGE---LKLADFGLARAKSIPTKTYSNEVVTLWYRPP 173
Query: 240 EVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
++L +Y + D+W G I Y + +G P F G T + I R + + WP I
Sbjct: 174 DILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGIL 233
Query: 298 SSAK--------------------------DIVKKMLHADPKERLSAAEVLNHPWMRVDG 331
S+ + +++ K+L + ++R+SA E + HP+ G
Sbjct: 234 SNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLG 293
Query: 332 D 332
+
Sbjct: 294 E 294
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 82.9 bits (205), Expect = 8e-18
Identities = 66/252 (26%), Positives = 118/252 (46%), Gaps = 21/252 (8%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
F +ELG GQFGV +L + K A K I + D +E E ++M L+ H N+
Sbjct: 8 FLKELGSGQFGVVHLGKWRG-KIDVAIKMIREGAMSEDDFIE----EAKVMMKLS-HPNL 61
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGV 189
V+L G + + ++ + A G L + + KG ++C + + Y S G
Sbjct: 62 VQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGF 121
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV---APEVLRRN- 245
+HRDL N L ED+ +K +DFGL+ + D + G+ + V PEV +
Sbjct: 122 IHRDLAARNCLVG---EDNVVKVSDFGLARYVL-DDQYTSSQGTKFPVKWAPPEVFDYSR 177
Query: 246 YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS-SAKDI 303
+ +++D+WS GV+++ + S G P+ + + +++ G+ P ++ I
Sbjct: 178 FSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYR----LYRPKLAPTEVYTI 233
Query: 304 VKKMLHADPKER 315
+ H P++R
Sbjct: 234 MYSCWHEKPEDR 245
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Score = 83.6 bits (207), Expect = 8e-18
Identities = 72/271 (26%), Positives = 113/271 (41%), Gaps = 31/271 (11%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
E+G G G Y + K T A K + R+ N+++ + + ++ ++ IV+
Sbjct: 22 EIGSGTCGQVYKMRFKKTGHVMAVKQM--RRTGNKEENKRILMDLDVVLKSHDCPYIVKC 79
Query: 134 KGAYEDRHSVNLIMDL---CAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYC-HSMGV 189
G + V + M+L C +L RI +G E + +V +HY GV
Sbjct: 80 YGYFITDSDVFICMELMSTCLD-KLLKRI--QGPIPEDILGKMTVAIVKALHYLKEKHGV 136
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL-----RR 244
+HRD+KP N L +S +K DFG+S G A Y+APE +
Sbjct: 137 IHRDVKPSNILLDASGN---VKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNP 193
Query: 245 NYGAEADIWSAGVILYILLSGVPPFWG-ETEQSIFDAILRGHIDFSSDPWP------NIS 297
Y AD+WS G+ L L +G P+ +TE + IL + P S
Sbjct: 194 KYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKIL-------QEEPPSLPPNEGFS 246
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
V L D ++R E+L HP++R
Sbjct: 247 PDFCSFVDLCLTKDHRKRPKYRELLQHPFIR 277
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296 |
| >gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands | Back alignment and domain information |
|---|
Score = 76.8 bits (190), Expect = 9e-18
Identities = 27/60 (45%), Positives = 38/60 (63%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITA 434
L+E F+ D D GTI+ +ELKA L LG LSE E+ +++ D DG+G ID+ EF+
Sbjct: 2 LREAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLEL 61
|
Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 81.9 bits (202), Expect = 2e-17
Identities = 62/221 (28%), Positives = 108/221 (48%), Gaps = 16/221 (7%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
+E+G GQFG+ +L + K++ A K+I + ED E Q+M L+ H +
Sbjct: 8 LVQEIGSGQFGLVWLGYWLE-KRKVAIKTIREGAMSE----EDFIEEAQVMMKLS-HPKL 61
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGV 189
V+L G +R + L+ + G L D + A +G +S+ +C + + Y S V
Sbjct: 62 VQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNV 121
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV---APEVLR-RN 245
+HRDL N L E+ +K +DFG++ F D + G+ + V +PEV
Sbjct: 122 IHRDLAARNCLVG---ENQVVKVSDFGMTRFVL-DDQYTSSTGTKFPVKWSSPEVFSFSK 177
Query: 246 YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
Y +++D+WS GV+++ + S G P+ + + + I G
Sbjct: 178 YSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGF 218
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Score = 83.6 bits (206), Expect = 2e-17
Identities = 84/311 (27%), Positives = 129/311 (41%), Gaps = 59/311 (18%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G G+ ++ A K +S R N+ + RE+ +M H+NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMK-CVNHKNIIG 87
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
L + + S+ D+ EL D ++I ER + L QM+ + + HS G
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIKHLHSAG 146
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNYG 247
++HRDLKP N + S D LK DFGL+ + V + YY APEV L Y
Sbjct: 147 IIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 248 AEADIWSAGVIL------YILLSGV----------------------------------- 266
DIWS G I+ +L G
Sbjct: 204 ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENR 263
Query: 267 PPFWGETEQSIFDAILRGHIDFSSDPWPN--ISSSAKDIVKKMLHADPKERLSAAEVLNH 324
P + G + + +F +L F +D N +S A+D++ KML D +R+S E L H
Sbjct: 264 PKYAGYSFEKLFPDVL-----FPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 325 PWMRVDGDASD 335
P++ V D S+
Sbjct: 319 PYINVWYDPSE 329
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364 |
| >gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 82.3 bits (203), Expect = 3e-17
Identities = 80/300 (26%), Positives = 123/300 (41%), Gaps = 49/300 (16%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVE-DVRREVQIMHHLTG 126
TYI +LG G + + K T+ A K I +L + + REV ++ L
Sbjct: 7 TYIKLEKLGEGTYATVFKGRSKLTENLVALKEI---RLEHEEGAPCTAIREVSLLKDLK- 62
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK------GHYSERAAANLCRQMVTV 180
H NIV L S+ L+ E D+ + + S Q++
Sbjct: 63 HANIVTLHDIVHTDKSLTLVF------EYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRG 116
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAP 239
+ YCH V+HRDLKP+N L + E LK DFGL+ P + + V + +Y P
Sbjct: 117 LAYCHRRKVLHRDLKPQNLLINERGE---LKLADFGLARAKSVPTKTYSNEVVTLWYRPP 173
Query: 240 EVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
+VL Y + D+W G I + + SG P F G T + I R + + WP IS
Sbjct: 174 DVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGIS 233
Query: 298 SSAK--------------------------DIVKKMLHADPKERLSAAEVLNHPWMRVDG 331
S+ + +++ K L + K+R+SA E + H + R G
Sbjct: 234 SNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG 293
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309 |
| >gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 82.7 bits (204), Expect = 3e-17
Identities = 83/314 (26%), Positives = 136/314 (43%), Gaps = 46/314 (14%)
Query: 60 KPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQ 119
K + +V + Y +++G G +G + T + A K + R + + RE++
Sbjct: 8 KTIWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLY-RPFQSELFAKRAYRELR 66
Query: 120 IMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL 173
++ H+ H N++ L + + H L+M G +++ SE L
Sbjct: 67 LLKHMK-HENVIGLLDVFTPDLSLDRFHDFYLVMPFM--GTDLGKLMKHEKLSEDRIQFL 123
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
QM+ + Y H+ G++HRDLKP N + ED LK DFGL+ + V +
Sbjct: 124 VYQMLKGLKYIHAAGIIHRDLKPGNLAVN---EDCELKILDFGLAR--QTDSEMTGYVVT 178
Query: 234 AYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGE--------------TEQSI 277
+Y APEV+ +Y DIWS G I+ +L+G P F G T
Sbjct: 179 RWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKE 238
Query: 278 FDAIL-----RGHI---------DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323
F L + ++ DF S PN + A ++++KML D + R++AAE L
Sbjct: 239 FVQKLQSEDAKNYVKKLPRFRKKDFRS-LLPNANPLAVNVLEKMLVLDAESRITAAEALA 297
Query: 324 HPWMRVDGDASDKP 337
HP+ D D+
Sbjct: 298 HPYFEEFHDPEDET 311
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 80.9 bits (200), Expect = 4e-17
Identities = 66/227 (29%), Positives = 95/227 (41%), Gaps = 34/227 (14%)
Query: 74 ELGRGQFGVTY---LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
+LG G FGV T A K + S KL D ++D +E IMH L H N+
Sbjct: 2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKL--SDIMDDFLKEAAIMHSLD-HENL 58
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRI--IAKGHYSERAAANLCRQMVTVVHYCHSMG 188
+ L G H + ++ +L G L DR+ A GH+ + Q+ + Y S
Sbjct: 59 IRLYGVVLT-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKR 117
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV----------- 237
+HRDL N L +S D +K DFGL + +YV
Sbjct: 118 FIHRDLAARNILLAS---DDKVKIGDFGLMRALPQNE--------DHYVMEEHLKVPFAW 166
Query: 238 -APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAI 281
APE LR R + +D+W GV L+ + + G P+ G + I I
Sbjct: 167 CAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKI 213
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Score = 81.2 bits (200), Expect = 4e-17
Identities = 77/300 (25%), Positives = 119/300 (39%), Gaps = 59/300 (19%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVE-DVRREVQIMHHLTG 126
TY+ +LG G + + K T+ A K I +L + + REV ++ +L
Sbjct: 6 TYVKLDKLGEGTYATVFKGRSKLTENLVALKEI---RLEHEEGAPCTAIREVSLLKNLK- 61
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTV------ 180
H NIV L + L+ E D + Y + + V +
Sbjct: 62 HANIVTLHDIIHTERCLTLVF------EYLDSDLK--QYLDNCGNLMSMHNVKIFMFQLL 113
Query: 181 --VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL----SVFFKPGDVFKDLVGSA 234
+ YCH ++HRDLKP+N L + E LK DFGL SV P + + V +
Sbjct: 114 RGLSYCHKRKILHRDLKPQNLLINEKGE---LKLADFGLARAKSV---PTKTYSNEVVTL 167
Query: 235 YYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292
+Y P+VL Y D+W G ILY + +G P F G T + I R + +
Sbjct: 168 WYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEET 227
Query: 293 WPNISSSAK--------------------------DIVKKMLHADPKERLSAAEVLNHPW 326
WP I+S+ + D++ +L + K R+SA L H +
Sbjct: 228 WPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSY 287
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288 |
| >gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Score = 81.2 bits (200), Expect = 5e-17
Identities = 70/288 (24%), Positives = 128/288 (44%), Gaps = 40/288 (13%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
D +T+ +G+G +G + V +K + A K + I+ E++ E I+
Sbjct: 15 DPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDID----EEIEAEYNILKA 70
Query: 124 LTGHRNIVELKGAYEDRHSVN-----LIMDLCAGGELFDRIIAKG------HYSERAAAN 172
L+ H N+V+ G Y + N L+++LC GG + D + KG E A
Sbjct: 71 LSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTD--LVKGFLKRGERMEEPIIAY 128
Query: 173 LCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL-V 231
+ + + + + H +HRD+K N L ++ + +K DFG+S + ++ V
Sbjct: 129 ILHEALMGLQHLHVNKTIHRDVKGNNILLTT---EGGVKLVDFGVSAQLTSTRLRRNTSV 185
Query: 232 GSAYYVAPEV------LRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH 285
G+ +++APEV L Y A D+WS G+ L G PP + +R
Sbjct: 186 GTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPL-ADLHP------MRAL 238
Query: 286 IDFSSDPWPNI------SSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
+P P + S+ D ++K L D ++R + +++L H ++
Sbjct: 239 FKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286 |
| >gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Score = 82.1 bits (202), Expect = 5e-17
Identities = 81/307 (26%), Positives = 129/307 (42%), Gaps = 51/307 (16%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G G+ + A K +S R N+ + RE+ +M H+NI+
Sbjct: 23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMK-CVNHKNIIS 80
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
L + + S+ D+ EL D ++I ER + L QM+ + + HS G
Sbjct: 81 LLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIKHLHSAG 139
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNYG 247
++HRDLKP N + S D LK DFGL+ + V + YY APEV L Y
Sbjct: 140 IIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 196
Query: 248 AEADIWSAGVIL------YILLSG-----------------VPPFWGETEQSIFDAILRG 284
DIWS G I+ IL G P F + + ++ + +
Sbjct: 197 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV-EN 255
Query: 285 HIDFSSDPWPNI----------------SSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
++ +P + +S A+D++ KML DP +R+S E L HP++
Sbjct: 256 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYIN 315
Query: 329 VDGDASD 335
V D ++
Sbjct: 316 VWYDPAE 322
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355 |
| >gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 80.5 bits (198), Expect = 2e-16
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 66
Query: 118 VQIMHHLTGHRNIVEL------KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 67 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADL-NNIVKCQKLTDDHVQ 123
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 124 FLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLAR--HTDDEMTGYV 178
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 179 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 238
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 239 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 298
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 299 AHAYFAQYHDPDDEPV 314
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345 |
| >gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 79.6 bits (196), Expect = 2e-16
Identities = 75/300 (25%), Positives = 119/300 (39%), Gaps = 56/300 (18%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVE-DVRREVQIMHHLTG 126
+Y+ +LG G + Y + Q A K IS + + V RE ++ L
Sbjct: 6 SYLNLEKLGEGSYATVYKGISRINGQLVALKVIS---MKTEEGVPFTAIREASLLKGLK- 61
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR------QMVTV 180
H NIV L + ++ + E +A+ + Q++
Sbjct: 62 HANIVLLHDIIHTKETLTFVF------EYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRG 115
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLVGSAYYVAP 239
+ Y H ++HRDLKP+N L S E LK DFGL+ P + V + +Y P
Sbjct: 116 LAYIHGQHILHRDLKPQNLLISYLGE---LKLADFGLARAKSIPSQTYSSEVVTLWYRPP 172
Query: 240 EVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDF---SSDPWP 294
+VL +Y + DIW AG I +L G P F G + +F+ + + + D WP
Sbjct: 173 DVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVS--DVFEQLEKIWTVLGVPTEDTWP 230
Query: 295 NISS----------------------------SAKDIVKKMLHADPKERLSAAEVLNHPW 326
+S A+D+ +ML PK+R+SA + L HP+
Sbjct: 231 GVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPY 290
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291 |
| >gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Score = 78.6 bits (194), Expect = 3e-16
Identities = 71/260 (27%), Positives = 112/260 (43%), Gaps = 34/260 (13%)
Query: 72 GRELGRGQFGVTY---LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
GR +G GQFG Y ++ ++ K A K+ + + E +E IM H
Sbjct: 11 GRCIGEGQFGDVYQGVYMSPENEKIAVAVKT--CKNCTSPSVREKFLQEAYIMRQFD-HP 67
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL--------CRQMVTV 180
+IV+L G + + V ++M+L GEL Y + +L Q+ T
Sbjct: 68 HIVKLIGVITE-NPVWIVMELAPLGEL-------RSYLQVNKYSLDLASLILYSYQLSTA 119
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS--AYYVA 238
+ Y S +HRD+ N L SS +K DFGLS + + +K G ++A
Sbjct: 120 LAYLESKRFVHRDIAARNVLVSSP---DCVKLGDFGLSRYLEDESYYKASKGKLPIKWMA 176
Query: 239 PEVLR-RNYGAEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP-N 295
PE + R + + +D+W GV ++ IL+ GV PF G + I G P P N
Sbjct: 177 PESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENG----ERLPMPPN 232
Query: 296 ISSSAKDIVKKMLHADPKER 315
+ ++ K DP +R
Sbjct: 233 CPPTLYSLMTKCWAYDPSKR 252
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270 |
| >gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands | Back alignment and domain information |
|---|
Score = 71.8 bits (177), Expect = 5e-16
Identities = 28/60 (46%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 449 KAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507
+AF FDKD G I+ +EL+ ALK G + I E+I EVD D DG+I++EEF +M
Sbjct: 4 EAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELMA 63
|
Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63 |
| >gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Score = 79.4 bits (196), Expect = 5e-16
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 37/186 (19%)
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL---VG 232
Q++ + Y HS G++HRD+KP N L +S + LK DFGL+ +P D K + V
Sbjct: 111 QILRGLKYLHSAGILHRDIKPGNLLVNS---NCVLKICDFGLARVEEP-DESKHMTQEVV 166
Query: 233 SAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL-------- 282
+ YY APE+L R+Y + DIWS G I LL F ++ D I
Sbjct: 167 TQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSL 226
Query: 283 ----------RGHIDFSSDPWPNISS----------SAKDIVKKMLHADPKERLSAAEVL 322
R HI P++ A ++ +ML DP +R+SAA+ L
Sbjct: 227 EAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADAL 286
Query: 323 NHPWMR 328
HP++
Sbjct: 287 AHPYLD 292
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372 |
| >gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Score = 78.1 bits (192), Expect = 6e-16
Identities = 71/289 (24%), Positives = 125/289 (43%), Gaps = 36/289 (12%)
Query: 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIM 121
+ D +T+ +G+G +G Y VT+K A K + D E++ E I+
Sbjct: 17 LGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPI----SDVDEEIEAEYNIL 72
Query: 122 HHLTGHRNIVELKGA-YEDRHSVN----LIMDLCAGG---ELFDRIIAKGH-YSERAAAN 172
L H N+V+ G Y+ V L+++LC GG EL ++ G E +
Sbjct: 73 QSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISY 132
Query: 173 LCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL-V 231
+ + + + H+ ++HRD+K N L ++ + +K DFG+S + ++ V
Sbjct: 133 ILYGALLGLQHLHNNRIIHRDVKGNNILLTT---EGGVKLVDFGVSAQLTSTRLRRNTSV 189
Query: 232 GSAYYVAPEVLR------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH 285
G+ +++APEV+ +Y A D+WS G+ L G PP + I R
Sbjct: 190 GTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPR-- 247
Query: 286 IDFSSDPWPNISSSAK------DIVKKMLHADPKERLSAAEVLNHPWMR 328
+P P + K + + L D + R S +L HP+++
Sbjct: 248 -----NPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 77.2 bits (190), Expect = 8e-16
Identities = 67/261 (25%), Positives = 126/261 (48%), Gaps = 25/261 (9%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
F +ELG GQFGV +L + + + A K+I+ + D +E E ++M L+ H +
Sbjct: 8 FMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMSEEDFIE----EAKVMMKLS-HPKL 61
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGV 189
V+L G + + ++ + G L + + + G S+ ++C+ + + Y
Sbjct: 62 VQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSF 121
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV---APEVLRRN- 245
+HRDL N L SS+ +K +DFG++ + D + G+ + V PEV +
Sbjct: 122 IHRDLAARNCLVSSTG---VVKVSDFGMTRYVL-DDEYTSSSGAKFPVKWSPPEVFNFSK 177
Query: 246 YGAEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
Y +++D+WS GV+++ + G PF ++ + + I RG + P ++S +
Sbjct: 178 YSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYR----PKLAS--MTVY 231
Query: 305 KKML---HADPKERLSAAEVL 322
+ M H P+ R + AE+L
Sbjct: 232 EVMYSCWHEKPEGRPTFAELL 252
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Score = 77.9 bits (192), Expect = 8e-16
Identities = 81/310 (26%), Positives = 131/310 (42%), Gaps = 66/310 (21%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR----REVQIMHHLTGHRN 129
ELG G GV V H+ + I +RKLI+ + +R RE++++H
Sbjct: 8 ELGAGNGGVVTKVLHRPSGL------IMARKLIHLEIKPAIRNQIIRELKVLHECNS-PY 60
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYC---H 185
IV GA+ +++ M+ GG L D+++ K G E + ++ + Y H
Sbjct: 61 IVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPENILGKISIAVLRGLTYLREKH 119
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL----VGSAYYVAPEV 241
+MHRD+KP N L +S E +K DFG+S G + + VG+ Y++PE
Sbjct: 120 K--IMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPER 169
Query: 242 LRRN-YGAEADIWSAGVILYILLSG---VPPFWGETEQSIF----------DAILRGHID 287
L+ Y ++DIWS G+ L + G +PP + +++F ++
Sbjct: 170 LQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGH 229
Query: 288 FSSDPWP--------NI-------------SSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
P P I S +D V K L +PKER E+ HP+
Sbjct: 230 PPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPF 289
Query: 327 -MRVDGDASD 335
R + + D
Sbjct: 290 IKRAELEEVD 299
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308 |
| >gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Score = 77.0 bits (189), Expect = 1e-15
Identities = 73/264 (27%), Positives = 122/264 (46%), Gaps = 16/264 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN---IV 131
+GRG FG Y DT + +A K + +K I E + +IM L + IV
Sbjct: 2 IGRGGFGEVYGCRKADTGKMYAMKCLD-KKRIKMKQGETLALNERIMLSLVSTGDCPFIV 60
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
+ A+ + I+DL GG+L + G +SE+ +++ + + H+ V++
Sbjct: 61 CMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVY 120
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRN--YGAE 249
RDLKP N L E ++ +D GL+ F VG+ Y+APEVL++ Y +
Sbjct: 121 RDLKPANILLD---EHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGTAYDSS 176
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309
AD +S G +L+ LL G PF + + I R + + + + S K +++ +L
Sbjct: 177 ADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLTVNVELPDSFSPELKSLLEGLLQ 235
Query: 310 ADPKERL-----SAAEVLNHPWMR 328
D +RL A EV H + +
Sbjct: 236 RDVSKRLGCLGRGAQEVKEHVFFK 259
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279 |
| >gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Score = 78.9 bits (194), Expect = 1e-15
Identities = 81/310 (26%), Positives = 125/310 (40%), Gaps = 74/310 (23%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH 127
+Y G +G G FGV Y DT ++ A K + D + RE+ IM +L H
Sbjct: 67 SYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKV-------LQDPQYKNRELLIMKNLN-H 118
Query: 128 RNIVELKGAY--------EDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAAA------ 171
NI+ LK Y E +N++M E + + K HY+ A
Sbjct: 119 INIIFLKDYYYTECFKKNEKNIFLNVVM------EFIPQTVHKYMKHYARNNHALPLFLV 172
Query: 172 -----NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226
LCR + Y HS + HRDLKP+N L + LK DFG + G
Sbjct: 173 KLYSYQLCRALA----YIHSKFICHRDLKPQNLLIDPNTHT--LKLCDFGSAKNLLAGQR 226
Query: 227 FKDLVGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR- 283
+ S +Y APE++ NY D+WS G I+ ++ G P F G QS D ++R
Sbjct: 227 SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSG---QSSVDQLVRI 283
Query: 284 --------------GHIDFSSDPWPNISS-------------SAKDIVKKMLHADPKERL 316
+ +++ +P++ A + + + L +P +RL
Sbjct: 284 IQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRL 343
Query: 317 SAAEVLNHPW 326
+ E L P+
Sbjct: 344 NPIEALADPF 353
|
Length = 440 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 76.3 bits (188), Expect = 1e-15
Identities = 73/275 (26%), Positives = 116/275 (42%), Gaps = 52/275 (18%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR----EVQIMHHLTGHR 128
++G+G FG Y K + A K+ S D++R E +I+ H
Sbjct: 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRS------TLPPDLKRKFLQEAEILKQYD-HP 52
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRI-IAKGHYSERAAANLCRQMVTVVHYCHSM 187
NIV+L G + + ++M+L GG L + K + + + + Y S
Sbjct: 53 NIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESK 112
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV---------- 237
+HRDL N L E++ LK +DFG+S ++ G Y V
Sbjct: 113 NCIHRDLAARNCLVG---ENNVLKISDFGMS---------REEEGGIYTVSDGLKQIPIK 160
Query: 238 --APEVLRRNYG---AEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSD 291
APE L NYG +E+D+WS G++L+ S G P+ G + Q + I G+
Sbjct: 161 WTAPEAL--NYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGY------ 212
Query: 292 PWPNISSSAKDIVKKMLH---ADPKERLSAAEVLN 323
P ++I + ML DP+ R S +E+ N
Sbjct: 213 RMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYN 247
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Score = 77.0 bits (190), Expect = 2e-15
Identities = 68/308 (22%), Positives = 115/308 (37%), Gaps = 64/308 (20%)
Query: 70 IFGRELGRG--QFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR---EVQIMHHL 124
+G+ + +L HK T A K I+ ++ ED++ E+ L
Sbjct: 1 ELLTLIGKCFEDLMIVHLAKHKPTNTLVAVKKIN----LDSCSKEDLKLLQQEIITSRQL 56
Query: 125 TGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHY----SERAAANLCRQMVTV 180
H NI+ ++ + ++ L A G D + K H+ E A A + + ++
Sbjct: 57 Q-HPNILPYVTSFIVDSELYVVSPLMAYGSCEDLL--KTHFPEGLPELAIAFILKDVLNA 113
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV---FFKPGDVFKDLVGSA--- 234
+ Y HS G +HR +K + L S K GL K G + +
Sbjct: 114 LDYIHSKGFIHRSVKASHILLSGDG-----KVVLSGLRYSVSMIKHGKRQRVVHDFPKSS 168
Query: 235 ----YYVAPEVLRRN---YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI- 286
+++PEVL++N Y ++DI+S G+ L +G PF + +RG +
Sbjct: 169 VKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVP 228
Query: 287 -----------------DFSSDPWPNISSSAKDIVKKM------------LHADPKERLS 317
SS+ PN S + L DP+ R S
Sbjct: 229 CLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPS 288
Query: 318 AAEVLNHP 325
A+++LNH
Sbjct: 289 ASQLLNHS 296
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314 |
| >gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein | Back alignment and domain information |
|---|
Score = 78.3 bits (193), Expect = 4e-15
Identities = 62/236 (26%), Positives = 101/236 (42%), Gaps = 21/236 (8%)
Query: 104 KLINRDDVED------VRREVQIMHHLTGHRNIVEL--KGAYEDRHSVNLIMDLCAGGEL 155
KL+ D E+ RRE + L H NIV L G + + + G L
Sbjct: 9 KLLRTDAPEEEHQRARFRRETALCARLY-HPNIVALLDSGEAPPGL-LFAVFEYVPGRTL 66
Query: 156 FDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDF 215
+ + A G L Q++ + H+ G++HRDLKP+N + S + K DF
Sbjct: 67 REVLAADGALPAGETGRLMLQVLDALACAHNQGIVHRDLKPQNIMVSQTGVRPHAKVLDF 126
Query: 216 GLSVF---FKPGDVFK-----DLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGV 266
G+ + DV +++G+ Y APE LR +D+++ G+I L+G
Sbjct: 127 GIGTLLPGVRDADVATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDLYAWGLIFLECLTGQ 186
Query: 267 PPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVL 322
G + I L +D S PW +++K L+ DP++R ++A L
Sbjct: 187 RVVQGASVAEILYQQL-SPVDVSLPPWIA-GHPLGQVLRKALNKDPRQRAASAPAL 240
|
This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 74.8 bits (184), Expect = 7e-15
Identities = 69/285 (24%), Positives = 114/285 (40%), Gaps = 41/285 (14%)
Query: 66 RNTYIFGRELGRGQFGVTY--LVTHKD---TKQQFACKSISSRKLINRDDVEDVRREVQI 120
R++ R LG G FG Y L +D + Q A K++ + + D D E I
Sbjct: 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTL--PESCSEQDESDFLMEALI 62
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA-------NL 173
M H+NIV L G +R ++++L AGG+L + ER ++
Sbjct: 63 MSKFN-HQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFC 121
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
R + Y +HRD+ N L + K DFG++ +D+ +
Sbjct: 122 ARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMA---------RDIYRA 172
Query: 234 AYY------------VAPEV-LRRNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFD 279
+YY + PE L + ++ D+WS GV+L+ + S G P+ G T Q + +
Sbjct: 173 SYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVME 232
Query: 280 AILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324
+ G DP I+ P++R + A +L
Sbjct: 233 FVTGGG---RLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 74.0 bits (182), Expect = 9e-15
Identities = 65/280 (23%), Positives = 119/280 (42%), Gaps = 49/280 (17%)
Query: 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR---E 117
++++ G +G+G+FG L ++ Q+ A K + +DD + E
Sbjct: 4 NSKELK----LGATIGKGEFGDVMLGDYR--GQKVAVKCL-------KDDSTAAQAFLAE 50
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQM 177
+M L H N+V+L G + + ++ + A G L D + ++G RA L +Q+
Sbjct: 51 ASVMTTLR-HPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRG----RAVITLAQQL 105
Query: 178 VTVVHYCHSM------GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
+ C M +HRDL N L S ED K +DFGL+ + +
Sbjct: 106 GFALDVCEGMEYLEEKNFVHRDLAARNVLVS---EDLVAKVSDFGLA-----KEASQGQD 157
Query: 232 GSAYYV---APEVLRRN-YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHI 286
V APE LR + ++D+WS G++L+ + S G P+ + + + +G+
Sbjct: 158 SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYR 217
Query: 287 DFSSDPWPNISSSAKDIVKKML---HADPKERLSAAEVLN 323
+ + P ++ K M DP +R + ++
Sbjct: 218 MEAPEGCP------PEVYKVMKDCWELDPAKRPTFKQLRE 251
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Score = 76.7 bits (189), Expect = 1e-14
Identities = 74/291 (25%), Positives = 108/291 (37%), Gaps = 56/291 (19%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR-------REVQIMHHLT 125
R +G+G G YL ++ A K I R+D+ + RE +I L
Sbjct: 8 RLIGKGGMGEVYLAYDPVCSRRVALKKI-------REDLSENPLLKKRFLREAKIAADLI 60
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFD--------RIIAKGHYSERAAANLCRQM 177
H IV + D V M G L ++K + +
Sbjct: 61 -HPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIF 119
Query: 178 VTV---VHYCHSMGVMHRDLKPENFLF---------------SSSAEDSPLKATDFGL-- 217
+ + Y HS GV+HRDLKP+N L E+ L D
Sbjct: 120 HKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERN 179
Query: 218 ---SVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEA-DIWSAGVILYILLSGVPPFWGET 273
S PG + VG+ Y+APE L +E+ DI++ GVILY +L+ P+ +
Sbjct: 180 ICYSSMTIPGKI----VGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKK 235
Query: 274 EQSIFDAILRGHIDFSSD--PWPNISSSAKDIVKKMLHADPKERLSAAEVL 322
+ I R I + P+ I I K L DP ER S+ + L
Sbjct: 236 GRKI---SYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQEL 283
|
Length = 932 |
| >gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 74.1 bits (182), Expect = 1e-14
Identities = 62/223 (27%), Positives = 100/223 (44%), Gaps = 27/223 (12%)
Query: 66 RNTYIFGRELGRGQFG-----VTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
RN FG+ LG G FG Y ++ D + A K + + + E + E++I
Sbjct: 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA--HSSEREALMSELKI 91
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH--YSERAAANLCRQMV 178
M HL H NIV L GA + +I + C G+L + + K + + Q+
Sbjct: 92 MSHLGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVA 151
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD----LVGSA 234
+ + S +HRDL N L + +K DFGL+ D+ D + G+A
Sbjct: 152 KGMAFLASKNCIHRDLAARNVLLTHG---KIVKICDFGLA-----RDIMNDSNYVVKGNA 203
Query: 235 Y----YVAPEVLRRN-YGAEADIWSAGVILYILLS-GVPPFWG 271
++APE + Y E+D+WS G++L+ + S G P+ G
Sbjct: 204 RLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPG 246
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302 |
| >gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Score = 75.7 bits (186), Expect = 2e-14
Identities = 45/142 (31%), Positives = 74/142 (52%), Gaps = 4/142 (2%)
Query: 77 RGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGA 136
RG FG YL K+ + +A K + +IN++ V V+ E + L+ IV L +
Sbjct: 14 RGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALA-LSKSPFIVHLYYS 72
Query: 137 YEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKP 196
+ ++V L+M+ GG++ + G++ E A ++ + Y H G++HRDLKP
Sbjct: 73 LQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKP 132
Query: 197 ENFLFSSSAEDSPLKATDFGLS 218
+N L S+ +K TDFGLS
Sbjct: 133 DNMLISNEGH---IKLTDFGLS 151
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669 |
| >gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Score = 73.4 bits (180), Expect = 2e-14
Identities = 70/290 (24%), Positives = 121/290 (41%), Gaps = 33/290 (11%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT-----GHRN 129
LG G G Y H T++ A K +I D ++++ QIM L
Sbjct: 9 LGHGNGGTVYKAYHLLTRRILAVK------VIPLDITVELQK--QIMSELEILYKCDSPY 60
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVH---YCHS 186
I+ GA+ + +++ + GG L Y + L R V VV Y S
Sbjct: 61 IIGFYGAFFVENRISICTEFMDGGSL-------DVYRKIPEHVLGRIAVAVVKGLTYLWS 113
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRN 245
+ ++HRD+KP N L ++ + +K DFG+S + K VG+ Y+APE +
Sbjct: 114 LKILHRDVKPSNMLVNTRGQ---VKLCDFGVSTQLV-NSIAKTYVGTNAYMAPERISGEQ 169
Query: 246 YGAEADIWSAGVILYILLSG---VPPFWGETEQSIFDAILRGHIDFSSDPWP--NISSSA 300
YG +D+WS G+ L G P + +L+ +D P S
Sbjct: 170 YGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKF 229
Query: 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFR 350
+ + + PKER + +++HP++ D + + + + V +++ R
Sbjct: 230 VHFITQCMRKQPKERPAPENLMDHPFIVQYNDGNAEVVSMWVCRALEERR 279
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 73.5 bits (180), Expect = 4e-14
Identities = 73/306 (23%), Positives = 135/306 (44%), Gaps = 32/306 (10%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSIS-SRKLINRD----DVEDVRRE 117
E R G+ LG G FG + + K ++ + K++ D D+ D+ E
Sbjct: 8 ELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSE 67
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR-- 175
+++M + H+NI+ L GA + ++++ + G L + + A+ + + C+
Sbjct: 68 MEMMKMIGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLP 127
Query: 176 --------------QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221
Q+ + Y S +HRDL N L + ED+ +K DFGL+
Sbjct: 128 EEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVT---EDNVMKIADFGLARDV 184
Query: 222 KPGDVFKDLVGS---AYYVAPEVL-RRNYGAEADIWSAGVILY-ILLSGVPPFWGETEQS 276
D +K ++APE L R Y ++D+WS GV+L+ I G P+ G +
Sbjct: 185 HNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 244
Query: 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDK 336
+F + GH D N + I+++ HA P +R + +++ + ++D+
Sbjct: 245 LFKLLKEGH---RMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVTSTDE 301
Query: 337 PLDIAV 342
LD++V
Sbjct: 302 YLDLSV 307
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Score = 71.6 bits (175), Expect = 9e-14
Identities = 55/175 (31%), Positives = 83/175 (47%), Gaps = 27/175 (15%)
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY 235
Q++ + + HS V+HRDLKP+N L +SS + +K DFGL+ + +V + +
Sbjct: 118 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVVVTLW 174
Query: 236 YVAPEV-LRRNYGAEADIWSAGVILYILLSGVPPFWGETE----QSIFDAI-LRGHID-- 287
Y APEV L+ +Y D+WS G I + P F G ++ I D I L G D
Sbjct: 175 YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 234
Query: 288 ---------FSSDPW-------PNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
F S +I KD++ K L +P +R+SA L+HP+
Sbjct: 235 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 289
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290 |
| >gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Score = 72.0 bits (176), Expect = 1e-13
Identities = 66/225 (29%), Positives = 110/225 (48%), Gaps = 30/225 (13%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR----REVQIMHHLTGHRN 129
ELG G GV + V+HK + I +RKLI+ + +R RE+Q++H
Sbjct: 12 ELGAGNGGVVFKVSHKPSG------LIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY- 64
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSM- 187
IV GA+ +++ M+ GG L D+++ K G E+ + ++ + Y
Sbjct: 65 IVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 123
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL----VGSAYYVAPEVLR 243
+MHRD+KP N L +S E +K DFG+S G + + VG+ Y++PE L+
Sbjct: 124 KIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQ 175
Query: 244 -RNYGAEADIWSAGVILYILLSG---VPPFWGETEQSIFDAILRG 284
+Y ++DIWS G+ L + G +PP + + +F + G
Sbjct: 176 GTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEG 220
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 70.9 bits (174), Expect = 1e-13
Identities = 63/252 (25%), Positives = 108/252 (42%), Gaps = 36/252 (14%)
Query: 61 PMEDVRNTYIFGRELGRGQFGVTY-----LVTHKDTKQQFACKSISSRKLINRDDVEDVR 115
P+ VR F ELG G FG Y + + A K++ ++ ++ R
Sbjct: 3 PLSAVR----FLEELGEGAFGKVYKGELTGPNERLSATSVAIKTL--KENAEPKVQQEFR 56
Query: 116 REVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA---- 171
+E ++M L H NIV L G ++ + A G+L + ++ +S+ A
Sbjct: 57 QEAELMSDLQ-HPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDE 115
Query: 172 ------------NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219
++ Q+ + Y S +HRDL N L E +K +DFGLS
Sbjct: 116 TVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLV---GEGLTVKISDFGLSR 172
Query: 220 FFKPGDVFKDLVGSAY---YVAPE-VLRRNYGAEADIWSAGVILYILLS-GVPPFWGETE 274
D ++ S ++ PE +L + E+DIWS GV+L+ + S G+ P++G +
Sbjct: 173 DIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN 232
Query: 275 QSIFDAILRGHI 286
Q + + I +
Sbjct: 233 QEVIEMIRSRQL 244
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 70.7 bits (173), Expect = 2e-13
Identities = 68/279 (24%), Positives = 104/279 (37%), Gaps = 58/279 (20%)
Query: 75 LGRGQFGVTYLVTHKDT------KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
LG G FG Y T D + A K++ RK + ++ +E +M + H
Sbjct: 3 LGSGAFGEVYEGTATDILGPGSGPIRVAVKTL--RKGATDQEKKEFLKEAHLMSNFN-HP 59
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA--------------NLC 174
NIV+L G +IM+L GG+L Y A ++C
Sbjct: 60 NIVKLLGVCLLNEPQYIIMELMEGGDLL-------SYLRDARVERFGPPLLTLKELLDIC 112
Query: 175 RQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP--LKATDFGLSVFFKPGDVFKDLVG 232
+ Y M +HRDL N L S D+ +K DFGL+ +D+
Sbjct: 113 LDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA---------RDIYK 163
Query: 233 SAYY------------VAPEVLRRN-YGAEADIWSAGVILY-ILLSGVPPFWGETEQSIF 278
S YY +APE L + ++D+WS GV+++ IL G P+ Q +
Sbjct: 164 SDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVL 223
Query: 279 DAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLS 317
+ G N ++ DP ER +
Sbjct: 224 QHVTAGG---RLQKPENCPDKIYQLMTNCWAQDPSERPT 259
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 70.3 bits (172), Expect = 2e-13
Identities = 55/221 (24%), Positives = 100/221 (45%), Gaps = 16/221 (7%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
F +ELG GQFGV + + A K I + + +E E ++M L+ H +
Sbjct: 8 FLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIE----EAKVMMKLS-HEKL 61
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAA-ANLCRQMVTVVHYCHSMGV 189
V+L G + + ++ + + G L + + G + + +C+ + + Y S
Sbjct: 62 VQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQF 121
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV---APEVLRR-N 245
+HRDL N L +K +DFGLS + D + VGS + V PEVL
Sbjct: 122 IHRDLAARNCLVDD---QGCVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLLYSK 177
Query: 246 YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
+ +++D+W+ GV+++ + S G P+ + + +G
Sbjct: 178 FSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGL 218
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 70.9 bits (173), Expect = 2e-13
Identities = 66/249 (26%), Positives = 99/249 (39%), Gaps = 46/249 (18%)
Query: 116 REVQIMHHLTGHRNIVELKGAYEDRHSVNLIM-----DLCAGGELFDRIIAKGHYSERAA 170
RE ++ L H NIV L + ++ L+ DLC + D+ G
Sbjct: 52 REASLLKGLK-HANIVLLHDIIHTKETLTLVFEYVHTDLC---QYMDK--HPGGLHPENV 105
Query: 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKD 229
Q++ + Y H ++HRDLKP+N L S + E LK DFGL+ P + +
Sbjct: 106 KLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGE---LKLADFGLARAKSVPSHTYSN 162
Query: 230 LVGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETE-QSIFDAILRGHI 286
V + +Y P+VL Y D+W G I ++ GV F G + Q + I
Sbjct: 163 EVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLG 222
Query: 287 DFSSDPWPNISS----------------------------SAKDIVKKMLHADPKERLSA 318
+ D WP + S A+D+ K+L PK RLSA
Sbjct: 223 TPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSA 282
Query: 319 AEVLNHPWM 327
L+H +
Sbjct: 283 QAALSHEYF 291
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 70.3 bits (172), Expect = 2e-13
Identities = 60/209 (28%), Positives = 91/209 (43%), Gaps = 30/209 (14%)
Query: 73 RELGRGQFGVTYLV----THKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
R LG G FG L + T + A K++ + + ++E+ I+ L H
Sbjct: 10 RVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC--GQQNTSGWKKEINILKTLY-HE 66
Query: 129 NIVELKGAYEDR--HSVNLIMDLCAGGELFDRIIAKGHYSERAAANL------CRQMVTV 180
NIV+ KG ++ + LIM+ G L D Y + NL +Q+
Sbjct: 67 NIVKYKGCCSEQGGKGLQLIMEYVPLGSLRD-------YLPKHKLNLAQLLLFAQQICEG 119
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD----VFKDLVGSAYY 236
+ Y HS +HRDL N L + D +K DFGL+ G V +D ++
Sbjct: 120 MAYLHSQHYIHRDLAARNVLLDN---DRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFW 176
Query: 237 VAPEVLRRN-YGAEADIWSAGVILYILLS 264
A E L+ N + +D+WS GV LY LL+
Sbjct: 177 YAVECLKENKFSYASDVWSFGVTLYELLT 205
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 70.3 bits (172), Expect = 2e-13
Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 18/204 (8%)
Query: 73 RELGRGQFGVTYLVTHK----DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
R+LG G FG L + +T +Q A KS+ + + D+++E++I+ +L H
Sbjct: 10 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLY-HE 66
Query: 129 NIVELKGAYEDR--HSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCH 185
NIV+ KG + + + LIM+ G L + + K + + Q+ + Y
Sbjct: 67 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLG 126
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD----VFKDLVGSAYYVAPEV 241
S +HRDL N L S + +K DFGL+ + V DL ++ APE
Sbjct: 127 SRQYVHRDLAARNVLVES---EHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPEC 183
Query: 242 L-RRNYGAEADIWSAGVILYILLS 264
L + + +D+WS GV LY LL+
Sbjct: 184 LIQSKFYIASDVWSFGVTLYELLT 207
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Score = 69.8 bits (171), Expect = 3e-13
Identities = 74/287 (25%), Positives = 123/287 (42%), Gaps = 36/287 (12%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
ELGRG +GV + H T A K I R +N + + + ++ I V
Sbjct: 7 EELGRGAYGVVDKMRHVPTGTIMAVKRI--RATVNSQEQKRLLMDLDISMRSVDCPYTVT 64
Query: 133 LKGAYEDRHSVNLIMDLCAGG--ELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHS-MG 188
GA V + M++ + + ++ KG E + +V + Y HS +
Sbjct: 65 FYGALFREGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS 124
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV-----GSAYYVAPEVL- 242
V+HRD+KP N L + + + +K DFG+S G + + G Y+APE +
Sbjct: 125 VIHRDVKPSNVLINRNGQ---VKLCDFGIS-----GYLVDSVAKTIDAGCKPYMAPERIN 176
Query: 243 ----RRNYGAEADIWSAGVILYILLSGVPPF--WGETEQSIFDAILRGHIDFSSDPWPNI 296
++ Y ++D+WS G+ + L +G P+ W Q L+ ++ S P
Sbjct: 177 PELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQ-----LKQVVEEPSPQLPAE 231
Query: 297 SSSA--KDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIA 341
S +D V K L + KER + E+L HP+ + K D+A
Sbjct: 232 KFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFEL---HLSKNTDVA 275
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 69.0 bits (169), Expect = 5e-13
Identities = 62/257 (24%), Positives = 109/257 (42%), Gaps = 20/257 (7%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
R + R+LG GQFG + +T A K++ + D +D E QIM L
Sbjct: 5 RTSIQLLRKLGAGQFGEVWEGLWNNT-TPVAVKTLKPGTM----DPKDFLAEAQIMKKLR 59
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTVVHY 183
H +++L + ++ +L G L + + A ++ Q+ + + Y
Sbjct: 60 -HPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAY 118
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPE 240
+ +HRDL N L E++ K DFGL+ K D+++ G+ + + APE
Sbjct: 119 LEAQNYIHRDLAARNVLV---GENNICKVADFGLARVIKE-DIYEAREGAKFPIKWTAPE 174
Query: 241 VLRRN-YGAEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298
N + ++D+WS G++L I+ G P+ G T + + +G + P
Sbjct: 175 AALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQG---YRMPCPPGCPK 231
Query: 299 SAKDIVKKMLHADPKER 315
DI+ DP +R
Sbjct: 232 ELYDIMLDCWKEDPDDR 248
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 69.3 bits (169), Expect = 6e-13
Identities = 69/282 (24%), Positives = 122/282 (43%), Gaps = 38/282 (13%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVT----HKDTKQQFACKSISSRKLINRD----DVEDV 114
E R+ + G+ LG G FG + K+ + ++ K++ D D+ D+
Sbjct: 14 EVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAV---KMLKSDATEKDLSDL 70
Query: 115 RREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK------------ 162
E+++M + H+NI+ L GA + +I++ + G L + + A+
Sbjct: 71 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPT 130
Query: 163 ----GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218
S + + Q+ + Y S +HRDL N L + ED+ +K DFGL+
Sbjct: 131 QVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLA 187
Query: 219 VFFKPGDVFKDLVGS---AYYVAPEVL-RRNYGAEADIWSAGVILY-ILLSGVPPFWGET 273
D +K ++APE L R Y ++D+WS GV+L+ I G P+ G
Sbjct: 188 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 247
Query: 274 EQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKER 315
+ +F + GH D N ++ +++ HA P +R
Sbjct: 248 VEELFKLLKEGH---RMDKPSNCTNELYMMMRDCWHAVPSQR 286
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 68.1 bits (166), Expect = 7e-13
Identities = 66/234 (28%), Positives = 106/234 (45%), Gaps = 48/234 (20%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR----REVQIMHHLTGHRNI 130
LG+G FG + T KD K+ + K D ++++ E +I+ H NI
Sbjct: 3 LGKGNFGEVFKGTLKD-------KTPVAVKTCKEDLPQELKIKFLSEARILKQYD-HPNI 54
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRIIAKG---------HYSERAAANLCRQMVTVV 181
V+L G R + ++M+L GG+ + K ++ AAA +
Sbjct: 55 VKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMA------- 107
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS------VFFKPGDVFKDLVGSAY 235
Y S +HRDL N L E++ LK +DFG+S ++ G K +
Sbjct: 108 -YLESKNCIHRDLAARNCLV---GENNVLKISDFGMSRQEDDGIYSSSG--LKQI--PIK 159
Query: 236 YVAPEVLRRNYG---AEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
+ APE L NYG +E+D+WS G++L+ S GV P+ G T Q + + +G+
Sbjct: 160 WTAPEAL--NYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGY 211
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Score = 70.3 bits (172), Expect = 1e-12
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 10/101 (9%)
Query: 230 LVGSAYYVAPEVL-RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDF 288
++G+ Y+APE+L + +G D W+ GV L+ L+G+PPF ET Q +F IL I
Sbjct: 540 ILGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDI-- 597
Query: 289 SSDPWPN----ISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
PWP +S +A++ ++ +L DP +R E+ HP
Sbjct: 598 ---PWPEGEEKLSVNAQNAIEILLTMDPTKRAGLKELKQHP 635
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669 |
| >gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Score = 68.6 bits (167), Expect = 1e-12
Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 33/221 (14%)
Query: 72 GRELGRGQFGVTYLVTHKDTK--QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN 129
G ++GRG +G Y KD K +++A K I + RE+ ++ L H N
Sbjct: 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI-----SMSACREIALLRELK-HPN 59
Query: 130 IVELKG---AYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERA-----------AANLCR 175
++ L+ ++ DR V L+ D A +L+ I K H + +A +L
Sbjct: 60 VIALQKVFLSHSDR-KVWLLFDY-AEHDLWH--IIKFHRASKANKKPMQLPRSMVKSLLY 115
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFL-FSSSAEDSPLKATDFGLSVFF----KPGDVFKDL 230
Q++ +HY H+ V+HRDLKP N L E +K D G + F KP +
Sbjct: 116 QILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPV 175
Query: 231 VGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPF 269
V + +Y APE+L R+Y DIW+ G I LL+ P F
Sbjct: 176 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 216
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 67.8 bits (166), Expect = 1e-12
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 25/231 (10%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
R + R+LG G FG + K+ + A K + S L+ + D + +EVQ + L
Sbjct: 5 REEFTLERKLGSGYFGEVWEGLWKNRVR-VAIKILKSDDLLKQQDFQ---KEVQALKRLR 60
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA--NLCRQMVTVVHY 183
H++++ L V +I +L G L + + A+ ++ Q+ + Y
Sbjct: 61 -HKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAY 119
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY-------Y 236
+HRDL N L ED K DFGL+ + K+ V + +
Sbjct: 120 LEEQNSIHRDLAARNILV---GEDLVCKVADFGLA------RLIKEDVYLSSDKKIPYKW 170
Query: 237 VAPEVL-RRNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
APE + ++D+WS G++LY + + G P+ G ++D I G+
Sbjct: 171 TAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGY 221
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Score = 67.8 bits (165), Expect = 2e-12
Identities = 67/221 (30%), Positives = 101/221 (45%), Gaps = 33/221 (14%)
Query: 72 GRELGRGQFGVTYLVTHKDTK--QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN 129
G ++GRG +G Y KD K + +A K I + RE+ ++ L H N
Sbjct: 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-----SMSACREIALLRELK-HPN 59
Query: 130 IVELKG---AYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERA-----------AANLCR 175
++ L+ ++ DR V L+ D A +L+ I K H + +A +L
Sbjct: 60 VISLQKVFLSHADR-KVWLLFDY-AEHDLWH--IIKFHRASKANKKPVQLPRGMVKSLLY 115
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFL-FSSSAEDSPLKATDFGLSVFF----KPGDVFKDL 230
Q++ +HY H+ V+HRDLKP N L E +K D G + F KP +
Sbjct: 116 QILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPV 175
Query: 231 VGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPF 269
V + +Y APE+L R+Y DIW+ G I LL+ P F
Sbjct: 176 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 216
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 67.0 bits (163), Expect = 2e-12
Identities = 65/230 (28%), Positives = 102/230 (44%), Gaps = 38/230 (16%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+GRG FG + + A KS R+ + D +E +I+ + H NIV L
Sbjct: 2 RIGRGNFGEVFSGRLRADNTPVAVKS--CRETLPPDLKAKFLQEARILKQYS-HPNIVRL 58
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKG---------HYSERAAANLCRQMVTVVHYC 184
G + + ++M+L GG+ + +G E AAA + Y
Sbjct: 59 IGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGM--------EYL 110
Query: 185 HSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS------VFFKPGDVFKDLVGSAYYVA 238
S +HRDL N L + E + LK +DFG+S V+ G + + V + A
Sbjct: 111 ESKHCIHRDLAARNCLVT---EKNVLKISDFGMSREEEDGVYASTGGMKQIPVK---WTA 164
Query: 239 PEVLRRNYG---AEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRG 284
PE L NYG +E+D+WS G++L+ S G P+ + Q +AI +G
Sbjct: 165 PEAL--NYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQG 212
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 66.9 bits (163), Expect = 2e-12
Identities = 64/253 (25%), Positives = 112/253 (44%), Gaps = 31/253 (12%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+G+G+FG L ++ K C + N + E +M L H N+V+L
Sbjct: 14 IGKGEFGDVMLGDYRGNKVAVKC-------IKNDATAQAFLAEASVMTQLR-HSNLVQLL 65
Query: 135 GA-YEDRHSVNLIMDLCAGGELFD------RIIAKGHYSERAAANLCRQMVTVVHYCHSM 187
G E++ + ++ + A G L D R + G + + ++C M Y +
Sbjct: 66 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM----EYLEAN 121
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVG-SAYYVAPEVLR-RN 245
+HRDL N L S ED+ K +DFGL+ K +D + APE LR +
Sbjct: 122 NFVHRDLAARNVLVS---EDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREKK 175
Query: 246 YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
+ ++D+WS G++L+ + S G P+ + + + +G+ + D P + D++
Sbjct: 176 FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPV---VYDVM 232
Query: 305 KKMLHADPKERLS 317
K+ H D R S
Sbjct: 233 KQCWHLDAATRPS 245
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 66.6 bits (163), Expect = 3e-12
Identities = 62/269 (23%), Positives = 100/269 (37%), Gaps = 41/269 (15%)
Query: 73 RELGRGQFGVT---YLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN 129
+ELG G FG + + + A K++ + ++ RE +M L H
Sbjct: 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAA--GKKEFLREASVMAQLD-HPC 57
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGV 189
IV L G + + L+M+L G L + + L Q+ + Y S
Sbjct: 58 IVRLIGVCKG-EPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHF 116
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL-VGSAYY------------ 236
+HRDL N L + K +DFG+S + L GS YY
Sbjct: 117 VHRDLAARNVLLVN---RHQAKISDFGMS---------RALGAGSDYYRATTAGRWPLKW 164
Query: 237 VAPEVLRRNYG---AEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDP 292
APE + NYG +++D+WS GV L+ S G P+ + + G
Sbjct: 165 YAPECI--NYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGE---RLPR 219
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEV 321
I+ P++R + +E+
Sbjct: 220 PEECPQEIYSIMLSCWKYRPEDRPTFSEL 248
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 66.7 bits (163), Expect = 3e-12
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 35/215 (16%)
Query: 70 IFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKL--INRDDVEDVRREVQIMHHLTGH 127
F ++LG+G FG L + D Q + ++ +KL + + D RE++I+ L H
Sbjct: 7 KFIQQLGKGNFGSVELCRY-DPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQ-H 64
Query: 128 RNIVELKG-AYE-DRHSVNLIMDLCAGGELFDRIIAKGHYSERA-----AANLCRQMVTV 180
NIV+ KG Y R ++ L+M+ G L D + + A+ +C+ M
Sbjct: 65 DNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGM--- 121
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS----------VFFKPGDVFKDL 230
Y S +HRDL N L S ++ +K DFGL+ +PG+
Sbjct: 122 -EYLGSKRYVHRDLATRNILVES---ENRVKIGDFGLTKVLPQDKEYYKVREPGE----- 172
Query: 231 VGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLS 264
++ APE L + + +D+WS GV+LY L +
Sbjct: 173 -SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 206
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 67.0 bits (163), Expect = 4e-12
Identities = 65/276 (23%), Positives = 121/276 (43%), Gaps = 32/276 (11%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSIS-SRKLINRD----DVEDVRREVQI 120
R+ G+ LG G FG + + ++++ + K++ D D+ D+ E+++
Sbjct: 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 73
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR----- 175
M + H+NI+ L GA + +I++ + G L + + A+ + ++ R
Sbjct: 74 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQ 133
Query: 176 -----------QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224
Q+ + Y S +HRDL N L + E++ +K DFGL+
Sbjct: 134 MTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDVNNI 190
Query: 225 DVFKDLVGS---AYYVAPEVL-RRNYGAEADIWSAGVILY-ILLSGVPPFWGETEQSIFD 279
D +K ++APE L R Y ++D+WS GV+++ I G P+ G + +F
Sbjct: 191 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 250
Query: 280 AILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKER 315
+ GH D N ++ +++ HA P R
Sbjct: 251 LLKEGH---RMDKPANCTNELYMMMRDCWHAIPSHR 283
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 66.9 bits (163), Expect = 4e-12
Identities = 72/303 (23%), Positives = 128/303 (42%), Gaps = 33/303 (10%)
Query: 66 RNTYIFGRELGRGQFGVTYLV----THKDTKQQFACKSISSRKLINRD-DVEDVRREVQI 120
R+ + G+ LG G FG K Q ++ K D D+ D+ E+++
Sbjct: 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMEL 70
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK----------------GH 164
M + H+NI+ L G + +I++ A G L + + A+
Sbjct: 71 MKLIGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQ 130
Query: 165 YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224
S + + Q+ + Y S +HRDL N L ED+ +K DFGL+
Sbjct: 131 LSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLV---TEDNVMKIADFGLARGVHDI 187
Query: 225 DVFKDLVGS---AYYVAPEVL-RRNYGAEADIWSAGVILY-ILLSGVPPFWGETEQSIFD 279
D +K ++APE L R Y ++D+WS G++++ I G P+ G + +F
Sbjct: 188 DYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFK 247
Query: 280 AILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLD 339
+ GH D N + ++++ HA P +R + + L +V S++ LD
Sbjct: 248 LLREGH---RMDKPSNCTHELYMLMRECWHAVPTQRPTFKQ-LVEALDKVLAAVSEEYLD 303
Query: 340 IAV 342
+++
Sbjct: 304 LSM 306
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
| >gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Score = 67.0 bits (163), Expect = 5e-12
Identities = 64/218 (29%), Positives = 101/218 (46%), Gaps = 28/218 (12%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR----REVQIMHHLTGHRN 129
ELG G GV V HK + I +RKLI+ + +R RE+Q++H
Sbjct: 12 ELGAGNGGVVTKVQHKPSGL------IMARKLIHLEIKPAIRNQIIRELQVLHECNSPY- 64
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM-G 188
IV GA+ +++ M+ GG L + E + ++ + Y
Sbjct: 65 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQ 124
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL----VGSAYYVAPEVLR- 243
+MHRD+KP N L +S E +K DFG+S G + + VG+ Y++PE L+
Sbjct: 125 IMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQG 176
Query: 244 RNYGAEADIWSAGVILYILLSG---VPPFWGETEQSIF 278
+Y ++DIWS G+ L L G +PP + ++IF
Sbjct: 177 THYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIF 214
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331 |
| >gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 60.8 bits (148), Expect = 5e-12
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 454 FDKDNSGYITMEELEHALKKYNMGDA-----KTIKEIIAEVDIDNDGRINYEEFAAMM 506
DKD GYI +EEL LK + + I+ E+D D DGRI++EEF M
Sbjct: 3 LDKDGDGYIDVEELRKLLKALGLKLTDEEVEELIEADFNEIDKDGDGRISFEEFLEAM 60
|
Length = 60 |
| >gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 66.8 bits (163), Expect = 5e-12
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 44/203 (21%)
Query: 168 RAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF 227
A + +Q++ + Y H+ ++HRD+K EN + D D G + F F
Sbjct: 157 DQALIIEKQILEGLRYLHAQRIIHRDVKTENIFIND--VDQVCIG-DLGAAQFPVVAPAF 213
Query: 228 KDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI 286
L G+ APEVL R+ Y ++ADIWSAG++L+ +L+ + + + + + H
Sbjct: 214 LGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHS 273
Query: 287 --------------DFSSDP---------------------WP-----NISSSAKDIVKK 306
+F DP +P N+ + +V K
Sbjct: 274 HLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHK 333
Query: 307 MLHADPKERLSAAEVLNHPWMRV 329
ML D R SA E+LN+P
Sbjct: 334 MLTFDAAMRPSAEEILNYPMFAQ 356
|
Length = 357 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 65.9 bits (161), Expect = 5e-12
Identities = 59/252 (23%), Positives = 110/252 (43%), Gaps = 48/252 (19%)
Query: 66 RNTYIFGRELGRGQFGVTYLVT-----HKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
R+T + RELG G FG +L ++ K+ A K++ ++ + D +D RE ++
Sbjct: 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTL--KETASNDARKDFEREAEL 61
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAAN-------- 172
+ + H NIV+ G + ++ + G+L + + G + +
Sbjct: 62 LTNF-QHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELT 120
Query: 173 ------LCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226
+ Q+ + + Y S +HRDL N L D +K DFG+S
Sbjct: 121 LSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLV---GYDLVVKIGDFGMS-------- 169
Query: 227 FKDLVGSAYY------------VAPE-VLRRNYGAEADIWSAGVILY-ILLSGVPPFWGE 272
+D+ + YY + PE ++ R + E+D+WS GV+L+ I G P++G
Sbjct: 170 -RDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGL 228
Query: 273 TEQSIFDAILRG 284
+ + + + I +G
Sbjct: 229 SNEEVIECITQG 240
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 65.3 bits (159), Expect = 8e-12
Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 25/187 (13%)
Query: 113 DVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAA 170
D E IM H NI+ L+G V ++ + G L D + K G ++
Sbjct: 51 DFLSEASIMGQFD-HPNIIHLEGVVTKSKPVMIVTEYMENGSL-DAFLRKHDGQFTVIQL 108
Query: 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL 230
+ R + + + Y MG +HRDL N L +S+ K +DFGLS V +D
Sbjct: 109 VGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNL---VCKVSDFGLS------RVLEDD 159
Query: 231 VGSAY----------YVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIF 278
+AY + APE + R + + +D+WS G++++ ++S G P+W + Q +
Sbjct: 160 PEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVI 219
Query: 279 DAILRGH 285
AI G+
Sbjct: 220 KAIEEGY 226
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 63.9 bits (155), Expect = 3e-11
Identities = 70/291 (24%), Positives = 123/291 (42%), Gaps = 54/291 (18%)
Query: 66 RNTYIFGRELGRGQFGVTYL-----VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
R + RELG G FG +L ++ K A K++ L R +D +RE ++
Sbjct: 4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAAR---KDFQREAEL 60
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELF--------DRII--------AKGH 164
+ +L H +IV+ G D + ++ + G+L D +I AKG
Sbjct: 61 LTNLQ-HEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGE 119
Query: 165 YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224
++ Q+ + + Y S +HRDL N L ++ +K DFG+S
Sbjct: 120 LGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLL---VKIGDFGMS------ 170
Query: 225 DVFKDLVGSAYY------------VAPE-VLRRNYGAEADIWSAGVILY-ILLSGVPPFW 270
+D+ + YY + PE ++ R + E+D+WS GVIL+ I G P++
Sbjct: 171 ---RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWF 227
Query: 271 GETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEV 321
+ + + I +G + P DI+ +P++RL+ E+
Sbjct: 228 QLSNTEVIECITQGRVLERPRVCPK---EVYDIMLGCWQREPQQRLNIKEI 275
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 63.1 bits (154), Expect = 4e-11
Identities = 60/293 (20%), Positives = 120/293 (40%), Gaps = 53/293 (18%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYL-----VTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
E R RELG+G FG+ Y V + + + A K+++ + + + E
Sbjct: 2 ELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASM--RERIEFLNE 59
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL---- 173
+M H ++V L G ++M+L A G+L + + E
Sbjct: 60 ASVMKEFNCH-HVVRLLGVVSTGQPTLVVMELMAKGDLKSYL--RSRRPEAENNPGLGPP 116
Query: 174 --------CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225
++ + Y + +HRDL N + + ED +K DFG++
Sbjct: 117 TLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVA---EDLTVKIGDFGMT------- 166
Query: 226 VFKDLVGSAYY------------VAPEVLRRN-YGAEADIWSAGVILY-ILLSGVPPFWG 271
+D+ + YY +APE L+ + ++D+WS GV+L+ + P+ G
Sbjct: 167 --RDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQG 224
Query: 272 ETEQSIFDAIL-RGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323
+ + + ++ GH+D + P+ ++++ +PK R + E+++
Sbjct: 225 LSNEEVLKFVIDGGHLDLPENC-PDK---LLELMRMCWQYNPKMRPTFLEIVS 273
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Score = 62.6 bits (152), Expect = 5e-11
Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 34/251 (13%)
Query: 85 LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144
LV T+Q F K + +R+ + + V M L H+ IV ED SV
Sbjct: 11 LVMDTRTQQTFILKGLRKSSEYSRERLTIIPHCVPNMVCL--HKYIVS-----ED--SVF 61
Query: 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSS 204
L++ GG+L+ I + E +MV + H G++ RDL P N L
Sbjct: 62 LVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDR 121
Query: 205 AEDSPLKATDFGLSVFFKP---GDVFKDLVGSAYYVAPEVLRRNYGAEA-DIWSAGVILY 260
++ T F + G+ +++ Y APEV + EA D WS G IL+
Sbjct: 122 GH---IQLTYFSRWSEVEDSCDGEAVENM-----YCAPEVGGISEETEACDWWSLGAILF 173
Query: 261 ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAA- 319
LL+ G+T + + H + W +S A+ +++++L +P ERL A
Sbjct: 174 ELLT------GKTLVECHPSGINTHTTLNIPEW--VSEEARSLLQQLLQFNPTERLGAGV 225
Query: 320 ----EVLNHPW 326
++ +HP+
Sbjct: 226 AGVEDIKSHPF 236
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237 |
| >gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Score = 62.3 bits (151), Expect = 1e-10
Identities = 68/273 (24%), Positives = 117/273 (42%), Gaps = 30/273 (10%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
F +G G FG K + ++ ++DD D E++++ L H NI
Sbjct: 11 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 70
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFD-----RIIAKG---HYSERAAANLCRQMVTV-- 180
+ L GA E R + L ++ G L D R++ + A+ L Q +
Sbjct: 71 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 130
Query: 181 ------VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF-KDLVGS 233
+ Y +HRDL N L E+ K DFGLS + +V+ K +G
Sbjct: 131 ADVARGMDYLSQKQFIHRDLAARNILV---GENYVAKIADFGLS---RGQEVYVKKTMGR 184
Query: 234 --AYYVAPEVLRRN-YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFS 289
++A E L + Y +D+WS GV+L+ ++S G P+ G T +++ + +G +
Sbjct: 185 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG---YR 241
Query: 290 SDPWPNISSSAKDIVKKMLHADPKERLSAAEVL 322
+ N D++++ P ER S A++L
Sbjct: 242 LEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 274
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 61.1 bits (148), Expect = 2e-10
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 26/225 (11%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKL-INRDDVEDVRREVQIMHHLTGHRNIVEL 133
+G G+FG + K ++ +I + K +D E IM + H NI+ L
Sbjct: 13 IGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFS-HHNIIRL 71
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMH 191
+G +I + G L D+ + G +S + R + + Y M +H
Sbjct: 72 EGVVTKFKPAMIITEYMENGAL-DKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVH 130
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY----------YVAPEV 241
RDL N L +S+ E K +DFGLS V +D Y + APE
Sbjct: 131 RDLAARNILVNSNLE---CKVSDFGLS------RVLEDDPEGTYTTSGGKIPIRWTAPEA 181
Query: 242 LR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRG 284
+ R + + +D+WS G++++ ++S G P+W + + AI G
Sbjct: 182 IAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDG 226
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 61.3 bits (149), Expect = 2e-10
Identities = 65/283 (22%), Positives = 114/283 (40%), Gaps = 48/283 (16%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKL---INRDDVEDVRREVQIMH 122
R+ G+ LG G FG +++ + L D+ D+ E+++M
Sbjct: 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMK 70
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR------- 175
+ H+NI+ L G + ++++ A G L D + A+ E A+ + R
Sbjct: 71 MIGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLT 130
Query: 176 ---------QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226
Q+ + + S +HRDL N L + ED +K DFGL+
Sbjct: 131 QKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVT---EDHVMKIADFGLA-------- 179
Query: 227 FKDLVGSAYY------------VAPEVL-RRNYGAEADIWSAGVILY-ILLSGVPPFWGE 272
+D+ YY +APE L R Y ++D+WS GV+L+ I G P+ G
Sbjct: 180 -RDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI 238
Query: 273 TEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKER 315
+ +F + G+ + N + +++ H P +R
Sbjct: 239 PVEELFKLLKEGY---RMEKPQNCTQELYHLMRDCWHEVPSQR 278
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 61.2 bits (148), Expect = 2e-10
Identities = 58/250 (23%), Positives = 114/250 (45%), Gaps = 42/250 (16%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKD--TKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
R+ + RELG G FG +L + +Q ++ + K + + +D RE +++ +
Sbjct: 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTN 63
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGEL--FDR-------IIAKGH----YSERAA 170
L H +IV+ G + + ++ + G+L F R ++A+G+ ++
Sbjct: 64 LQ-HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQM 122
Query: 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL 230
++ +Q+ + Y S +HRDL N L E+ +K DFG+S +D+
Sbjct: 123 LHIAQQIAAGMVYLASQHFVHRDLATRNCLV---GENLLVKIGDFGMS---------RDV 170
Query: 231 VGSAYY------------VAPE-VLRRNYGAEADIWSAGVILY-ILLSGVPPFWGETEQS 276
+ YY + PE ++ R + E+D+WS GV+L+ I G P++ +
Sbjct: 171 YSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE 230
Query: 277 IFDAILRGHI 286
+ + I +G +
Sbjct: 231 VIECITQGRV 240
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Score = 60.8 bits (148), Expect = 3e-10
Identities = 67/276 (24%), Positives = 114/276 (41%), Gaps = 36/276 (13%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
E+GRG FG + HK + A K I S ++ + + + ++ ++ + IV+
Sbjct: 11 EIGRGAFGTVNKMLHKPSGTIMAVKRIRS--TVDEKEQKRLLMDLDVVMRSSDCPYIVKF 68
Query: 134 KGAYEDRHSVNLIMDLCAGG-ELFDRII---AKGHYSERAAANLCRQMVTVVHYC-HSMG 188
GA + M+L + F + + K E + V ++Y +
Sbjct: 69 YGALFREGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK 128
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLS-----VFFKPGDVFKDLVGSAYYVAPEVL- 242
++HRD+KP N L + +K DFG+S K D G Y+APE +
Sbjct: 129 IIHRDVKPSNILLDRNGN---IKLCDFGISGQLVDSIAKTRDA-----GCRPYMAPERID 180
Query: 243 ---RRNYGAEADIWSAGVILYILLSGVPPF--WGETEQSIFDAILRGHID-----FSSDP 292
R Y +D+WS G+ LY + +G P+ W S+FD L + S+
Sbjct: 181 PSARDGYDVRSDVWSLGITLYEVATGKFPYPKW----NSVFDQ-LTQVVKGDPPILSNSE 235
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
S S + + L D +R E+L HP+++
Sbjct: 236 EREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIK 271
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 60.4 bits (146), Expect = 3e-10
Identities = 65/258 (25%), Positives = 115/258 (44%), Gaps = 35/258 (13%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDV--EDVRREVQIMHHLTGHR 128
G +G G+FG + T Q+ A K+I DV + E +M L H+
Sbjct: 10 LGEIIGEGEFGAVLQGEY--TGQKVAVKNIKC-------DVTAQAFLEETAVMTKLH-HK 59
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM- 187
N+V L G + + ++M+L + G L + + +G RA ++ + + + M
Sbjct: 60 NLVRLLGVIL-HNGLYIVMELMSKGNLVNFLRTRG----RALVSVIQLLQFSLDVAEGME 114
Query: 188 -----GVMHRDLKPENFLFSSSAEDSPLKATDFGL-SVFFKPGDVFKDLVGSAYYVAPEV 241
++HRDL N L S ED K +DFGL V D K V + APE
Sbjct: 115 YLESKKLVHRDLAARNILVS---EDGVAKVSDFGLARVGSMGVDNSKLPVK---WTAPEA 168
Query: 242 LRRN-YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299
L+ + +++D+WS GV+L+ + S G P+ + + + + + +G + +P +
Sbjct: 169 LKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKG---YRMEPPEGCPAD 225
Query: 300 AKDIVKKMLHADPKERLS 317
++ +PK+R S
Sbjct: 226 VYVLMTSCWETEPKKRPS 243
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Score = 60.8 bits (147), Expect = 3e-10
Identities = 65/270 (24%), Positives = 121/270 (44%), Gaps = 34/270 (12%)
Query: 75 LGRGQFG--VTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+G G FG + ++ K A K + ++ + +D D E++++ L H NI+
Sbjct: 10 IGEGNFGQVIRAMIKKDGLKMNAAIKML--KEFASENDHRDFAGELEVLCKLGHHPNIIN 67
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFD-----RII------AKGH-----YSERAAANLCRQ 176
L GA E+R + + ++ G L D R++ AK H + +
Sbjct: 68 LLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASD 127
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF-KDLVGS-- 233
+ T + Y +HRDL N L E+ K DFGLS + +V+ K +G
Sbjct: 128 VATGMQYLSEKQFIHRDLAARNVLV---GENLASKIADFGLS---RGEEVYVKKTMGRLP 181
Query: 234 AYYVAPEVLRRN-YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSD 291
++A E L + Y ++D+WS GV+L+ ++S G P+ G T +++ + +G + +
Sbjct: 182 VRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQG---YRME 238
Query: 292 PWPNISSSAKDIVKKMLHADPKERLSAAEV 321
N +++++ P ER A++
Sbjct: 239 KPRNCDDEVYELMRQCWRDRPYERPPFAQI 268
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297 |
| >gnl|CDD|227455 COG5126, FRQ1, Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] | Back alignment and domain information |
|---|
Score = 58.1 bits (141), Expect = 5e-10
Identities = 31/70 (44%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
EEE L+E FK D D+ G I+ EL+ L LG RLS+ EV +L++ D DG+G ID
Sbjct: 90 KEEE---LREAFKLFDKDHDGYISIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDGEID 146
Query: 428 YIEFITATMH 437
Y EF
Sbjct: 147 YEEFKKLIKD 156
|
Length = 160 |
| >gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Score = 60.3 bits (146), Expect = 5e-10
Identities = 64/269 (23%), Positives = 115/269 (42%), Gaps = 28/269 (10%)
Query: 69 YIFGRELGRGQFGV---TYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
+ GR LG+G+FG L + + Q+ A K + + + + D+E+ RE M
Sbjct: 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKA-DIFSSSDIEEFLREAACMKEFD 59
Query: 126 GHRNIVELKGAYEDRHSVN------LIMDLCAGGELFDRIIAKGHYSER---AAANLCRQ 176
H N+++L G + +I+ G+L ++ E L R
Sbjct: 60 -HPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRF 118
Query: 177 MVTV---VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
M+ + + Y S +HRDL N + E+ + DFGLS GD ++ S
Sbjct: 119 MIDIASGMEYLSSKNFIHRDLAARNCML---NENMTVCVADFGLSKKIYSGDYYRQGCAS 175
Query: 234 AY---YVAPEVLRRN-YGAEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDF 288
++A E L N Y +D+W+ GV ++ I+ G P+ G I++ +++G +
Sbjct: 176 KLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKG--NR 233
Query: 289 SSDPWPNISSSAKDIVKKMLHADPKERLS 317
P P+ +++ + +PK R S
Sbjct: 234 LKQP-PDCLEDVYELMCQCWSPEPKCRPS 261
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 60.0 bits (146), Expect = 5e-10
Identities = 68/260 (26%), Positives = 115/260 (44%), Gaps = 26/260 (10%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
R + R+LG GQFG ++ T T + A K++ + E +E QIM L
Sbjct: 5 RESLKLERKLGAGQFGEVWMGTWNGT-TKVAVKTLKPGTM----SPEAFLQEAQIMKKLR 59
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRI-IAKGHY-SERAAANLCRQMVTVVHY 183
H +V+L + + ++ + + G L D + +G ++ Q+ + Y
Sbjct: 60 -HDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAY 118
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPE 240
S +HRDL N L E+ K DFGL+ + D + G+ + + APE
Sbjct: 119 LESRNYIHRDLAARNILVG---ENLVCKIADFGLARLIED-DEYTAREGAKFPIKWTAPE 174
Query: 241 VLRRNYGA---EADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP-N 295
NYG ++D+WS G++L I+ G P+ G T + + + + RG+ P P N
Sbjct: 175 AA--NYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGY----RMPRPPN 228
Query: 296 ISSSAKDIVKKMLHADPKER 315
D++ + DP+ER
Sbjct: 229 CPEELYDLMLQCWDKDPEER 248
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 60.0 bits (145), Expect = 5e-10
Identities = 59/247 (23%), Positives = 107/247 (43%), Gaps = 36/247 (14%)
Query: 61 PMEDVRNTYIFGRELGRGQFGVTY----LVTHKDTKQQFACKSISSRKLINRDDVEDVRR 116
P+ VR F ELG FG Y + D Q A K++ + + N + ++
Sbjct: 3 PLSAVR----FMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTL--KDINNPQQWGEFQQ 56
Query: 117 EVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAAN---- 172
E +M L H NIV L G V ++ + G+L + +I + +S+ ++
Sbjct: 57 EASLMAELH-HPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDG 115
Query: 173 -------------LCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219
+ Q+ + Y S +H+DL N L E +K +D GLS
Sbjct: 116 TVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILI---GEQLHVKISDLGLSR 172
Query: 220 FFKPGDVFKDLVGSAY---YVAPE-VLRRNYGAEADIWSAGVILYILLS-GVPPFWGETE 274
D ++ S ++ PE ++ + +++DIWS GV+L+ + S G+ P++G +
Sbjct: 173 EIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN 232
Query: 275 QSIFDAI 281
Q + + +
Sbjct: 233 QEVIEMV 239
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 59.4 bits (144), Expect = 9e-10
Identities = 65/279 (23%), Positives = 118/279 (42%), Gaps = 50/279 (17%)
Query: 75 LGRGQFGVTYLVTHK-----DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN 129
LGRG+FG +L K + K++ K + + + RRE+ + L+ H+N
Sbjct: 13 LGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK--DENLQSEFRRELDMFRKLS-HKN 69
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGEL--FDRIIAKGHYSERAAANLCRQMVTVVH-YCHS 186
+V L G + +I++ G+L F R + +Q V +
Sbjct: 70 VVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALG 129
Query: 187 MG------VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYY---- 236
M +HRDL N L SS E +K + LS KD+ S YY
Sbjct: 130 MDHLSNARFVHRDLAARNCLVSSQRE---VKVSLLSLS---------KDVYNSEYYKLRN 177
Query: 237 -------VAPEVLRRN-YGAEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHID 287
+APE ++ + + ++D+WS GV+++ + G PF+G +++ + + + G ++
Sbjct: 178 ALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLE 237
Query: 288 FSSDPWPNISSSAKDIVKKMLH---ADPKERLSAAEVLN 323
P + K M +PK+R S +E+++
Sbjct: 238 -----LPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVS 271
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 60.2 bits (146), Expect = 1e-09
Identities = 68/282 (24%), Positives = 110/282 (39%), Gaps = 46/282 (16%)
Query: 17 TTADPDTGPGHHPNGLKIDPPGPPRPSSSATSATS--------SSVGRVLGKPMED---- 64
D + K D S T AT S V +P E
Sbjct: 27 GGTDTSDSKDTTGD--KFDDCDELGDSDDVTHATDYDADEESLSPQTDVCQEPCETTSSS 84
Query: 65 -----VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFAC--KSISSRKLINRDDVEDVRRE 117
VR Y L G G ++ T +Q+ K+++ K RE
Sbjct: 85 DPASVVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK--------TPGRE 136
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDL--CAGGELFDRIIAKGHYSERAAANLCR 175
+ I+ ++ HR I+ L AY + +V ++M C +LF + G A + R
Sbjct: 137 IDILKTIS-HRAIINLIHAYRWKSTVCMVMPKYKC---DLFTYVDRSGPLPLEQAITIQR 192
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV-----FFKPGDVFKDL 230
+++ + Y H G++HRD+K EN +F E++ L DFG + P
Sbjct: 193 RLLEALAYLHGRGIIHRDVKTEN-IFLDEPENAVLG--DFGAACKLDAHPDTPQCY--GW 247
Query: 231 VGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWG 271
G+ +PE+L + Y A+ DIWSAG++L+ + +G
Sbjct: 248 SGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFG 289
|
Length = 392 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 58.7 bits (142), Expect = 1e-09
Identities = 56/218 (25%), Positives = 92/218 (42%), Gaps = 16/218 (7%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKL-INRDDVEDVRREVQIMHHLTGHRNIVEL 133
+G G+FG K ++ +I + K D E IM H NI+ L
Sbjct: 12 IGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD-HPNIIHL 70
Query: 134 KGAYEDRHSVNLIMDLCAGGEL--FDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
+G V +I + G L F R G ++ + R + + Y M +H
Sbjct: 71 EGVVTKSRPVMIITEFMENGALDSFLRQ-NDGQFTVIQLVGMLRGIAAGMKYLSEMNYVH 129
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS------AYYVAPEVLR-R 244
RDL N L +S+ K +DFGLS F + S + APE + R
Sbjct: 130 RDLAARNILVNSNL---VCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYR 186
Query: 245 NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAI 281
+ + +D+WS G++++ ++S G P+W + Q + +AI
Sbjct: 187 KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAI 224
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 58.5 bits (141), Expect = 2e-09
Identities = 62/287 (21%), Positives = 116/287 (40%), Gaps = 47/287 (16%)
Query: 66 RNTYIFGRELGRGQFGVTYLV--THKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
R + ELG G FG +L + +Q ++ + K + +D +RE +++
Sbjct: 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTV 63
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGEL--FDR-------------IIAKGHYSER 168
L H++IV G + + ++ + G+L F R +A G +
Sbjct: 64 LQ-HQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLG 122
Query: 169 AAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFK 228
+ Q+ + + Y S+ +HRDL N L + +K DFG+S +
Sbjct: 123 QMLAIASQIASGMVYLASLHFVHRDLATRNCLV---GQGLVVKIGDFGMS---------R 170
Query: 229 DLVGSAYY------------VAPE-VLRRNYGAEADIWSAGVILY-ILLSGVPPFWGETE 274
D+ + YY + PE +L R + E+DIWS GV+L+ I G P++ +
Sbjct: 171 DIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN 230
Query: 275 QSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEV 321
+ I +G P I++ +P++R+ ++
Sbjct: 231 TEAIECITQGRELERPRTCPP---EVYAIMQGCWQREPQQRMVIKDI 274
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 57.7 bits (139), Expect = 3e-09
Identities = 62/253 (24%), Positives = 109/253 (43%), Gaps = 26/253 (10%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
++LG GQFG ++ + ++ + A K++ + V+ E +M L H +V
Sbjct: 12 KKLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTM----SVQAFLEEANLMKTLQ-HDKLVR 65
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVM 190
L + +I + A G L D + + G + Q+ + Y +
Sbjct: 66 LYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYI 125
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLRRNYG 247
HRDL+ N L S S K DFGL+ + + + G+ + + APE + N+G
Sbjct: 126 HRDLRAANVLVSESLM---CKIADFGLARVIE-DNEYTAREGAKFPIKWTAPEAI--NFG 179
Query: 248 A---EADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP-NISSSAKD 302
+ ++D+WS G++LY I+ G P+ G + + A+ RG+ P N D
Sbjct: 180 SFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGY----RMPRMENCPDELYD 235
Query: 303 IVKKMLHADPKER 315
I+K +ER
Sbjct: 236 IMKTCWKEKAEER 248
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 57.4 bits (138), Expect = 3e-09
Identities = 61/252 (24%), Positives = 113/252 (44%), Gaps = 27/252 (10%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG+G FG ++ T T + A K++ + E +E Q+M L H +V+L
Sbjct: 13 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 66
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSER----AAANLCRQMVTVVHYCHSMGV 189
+ + ++ + + G L D + KG + ++ Q+ + + Y M
Sbjct: 67 YAVVSEE-PIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 123
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPE-VLRRN 245
+HRDL+ N L E+ K DFGL+ + + + G+ + + APE L
Sbjct: 124 VHRDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGR 179
Query: 246 YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWP-NISSSAKDI 303
+ ++D+WS G++L L + G P+ G + + D + RG+ P P S D+
Sbjct: 180 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY----RMPCPPECPESLHDL 235
Query: 304 VKKMLHADPKER 315
+ + +P+ER
Sbjct: 236 MCQCWRKEPEER 247
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 57.5 bits (139), Expect = 3e-09
Identities = 67/291 (23%), Positives = 114/291 (39%), Gaps = 47/291 (16%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKD--TKQQFACKSISSRKLINRDDVE-DVRREVQIMH 122
RN + R++G+G FG + + F ++ K D++ D +RE +M
Sbjct: 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMA 63
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGEL--FDRIIAKGHYSERAAANLCRQMVTV 180
H NIV+L G + L+ + A G+L F R H S RA +L +
Sbjct: 64 EFD-HPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLR-----HRSPRAQCSLSHSTSSA 117
Query: 181 VHY-------------CHSMGV------------MHRDLKPENFLFSSSAEDSPLKATDF 215
C + V +HRDL N L E+ +K DF
Sbjct: 118 RKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVG---ENMVVKIADF 174
Query: 216 GLSVFFKPGDVFK----DLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLS-GVPPFW 270
GLS D +K D + + + Y E+D+W+ GV+L+ + S G+ P++
Sbjct: 175 GLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYY 234
Query: 271 GETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEV 321
G + + + G++ D N ++++ P +R S A +
Sbjct: 235 GMAHEEVIYYVRDGNVLSCPD---NCPLELYNLMRLCWSKLPSDRPSFASI 282
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 52.4 bits (126), Expect = 4e-09
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 380 KSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQ----LMEAADVDGNGTIDYIEFITA 434
K +D D G I EEL+ L LG +L++ EV + D DG+G I + EF+ A
Sbjct: 1 KLLDKDGDGYIDVEELRKLLKALGLKLTDEEVEELIEADFNEIDKDGDGRISFEEFLEA 59
|
Length = 60 |
| >gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 57.0 bits (137), Expect = 5e-09
Identities = 66/270 (24%), Positives = 119/270 (44%), Gaps = 34/270 (12%)
Query: 75 LGRGQFG--VTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+G G FG + + + A K + ++ ++DD D E++++ L H NI+
Sbjct: 3 IGEGNFGQVLKARIKKDGLRMDAAIKRM--KEYASKDDHRDFAGELEVLCKLGHHPNIIN 60
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFD-----RII------AKGH-----YSERAAANLCRQ 176
L GA E R + L ++ G L D R++ A + S + +
Sbjct: 61 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 120
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF-KDLVGS-- 233
+ + Y +HRDL N L E+ K DFGLS + +V+ K +G
Sbjct: 121 VARGMDYLSQKQFIHRDLAARNILV---GENYVAKIADFGLS---RGQEVYVKKTMGRLP 174
Query: 234 AYYVAPEVLRRN-YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSD 291
++A E L + Y +D+WS GV+L+ ++S G P+ G T +++ + +G + +
Sbjct: 175 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG---YRLE 231
Query: 292 PWPNISSSAKDIVKKMLHADPKERLSAAEV 321
N D++++ P ER S A++
Sbjct: 232 KPLNCDDEVYDLMRQCWREKPYERPSFAQI 261
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270 |
| >gnl|CDD|222407 pfam13833, EF_hand_6, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 51.4 bits (124), Expect = 7e-09
Identities = 23/47 (48%), Positives = 25/47 (53%)
Query: 387 SGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFIT 433
G IT EELK L LG LSE EV L D DG+G I + EF
Sbjct: 2 KGLITREELKRALALLGISLSEEEVDILFREFDTDGDGKISFEEFCV 48
|
Length = 53 |
| >gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Score = 56.1 bits (135), Expect = 8e-09
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 16/205 (7%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQF--ACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
ELG G FG +K K+Q A K + + + +++ RE +IMH L + IV
Sbjct: 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN--EKSVRDEMMREAEIMHQLD-NPYIV 58
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVM 190
+ G E ++ L+M++ +GG L + K + L Q+ + Y +
Sbjct: 59 RMIGVCE-AEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFV 117
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD-VFKDLVGSAY---YVAPE-VLRRN 245
HRDL N L K +DFGLS D +K + + APE + R
Sbjct: 118 HRDLAARNVLL---VNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRK 174
Query: 246 YGAEADIWSAGVILYILLS-GVPPF 269
+ + +D+WS G+ ++ S G P+
Sbjct: 175 FSSRSDVWSYGITMWEAFSYGQKPY 199
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 56.2 bits (136), Expect = 1e-08
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 13/221 (5%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRD-DVEDVRREVQIMHHLTGHRNIV 131
+ +G G+FG K ++ +I + K + D D E IM H NI+
Sbjct: 10 KVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFD-HPNII 68
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGV 189
L+G V +I + G L D+ + + G ++ + R + + + Y M
Sbjct: 69 RLEGVVTKSRPVMIITEYMENGSL-DKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNY 127
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVG---SAYYVAPEVLR-RN 245
+HRDL N L +S + K +DFGLS + + G + APE + R
Sbjct: 128 VHRDLAARNILVNS---NLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRK 184
Query: 246 YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
+ + +D+WS G++++ ++S G P+W + Q + A+ G+
Sbjct: 185 FTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGY 225
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Score = 56.2 bits (135), Expect = 1e-08
Identities = 54/240 (22%), Positives = 108/240 (45%), Gaps = 30/240 (12%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDV---EDVRREVQIMHH 123
+T F ELG +FG Y T ++++ + L ++ + E+ + E +
Sbjct: 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSR 64
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAAN----------- 172
L H NIV L G +++I C+ +L + ++ + +S+ + +
Sbjct: 65 LQ-HPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEP 123
Query: 173 -----LCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF 227
+ Q+ + + S V+H+DL N L +K +D GL D +
Sbjct: 124 ADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLN---VKISDLGLFREVYAADYY 180
Query: 228 KDLVGSAY----YVAPE-VLRRNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAI 281
K L+G++ +++PE ++ + ++DIWS GV+L+ + S G+ P+ G + Q + + I
Sbjct: 181 K-LMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMI 239
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283 |
| >gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Score = 55.3 bits (133), Expect = 2e-08
Identities = 57/223 (25%), Positives = 97/223 (43%), Gaps = 17/223 (7%)
Query: 72 GRELGRGQFGVTY---LVTHKDT-KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH 127
+ LG G FG + + D+ K A K+I R R +++ + M L H
Sbjct: 12 LKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRS--GRQTFQEITDHMLAMGSLD-H 68
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHS 186
IV L G S+ L+ L G L D + + + N C Q+ ++Y
Sbjct: 69 AYIVRLLGICPGA-SLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEE 127
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPE-VL 242
++HR+L N L S DS ++ DFG++ P D + + ++A E +L
Sbjct: 128 HRMVHRNLAARNILLKS---DSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESIL 184
Query: 243 RRNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRG 284
Y ++D+WS GV ++ ++S G P+ G + D + +G
Sbjct: 185 FGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKG 227
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279 |
| >gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 55.4 bits (133), Expect = 2e-08
Identities = 64/282 (22%), Positives = 125/282 (44%), Gaps = 31/282 (10%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYL-----VTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
E R RELG+G FG+ Y V + + + A K+++ + R+ +E + E
Sbjct: 2 EVAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASM-RERIEFL-NE 59
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGEL---FDRIIAKGHYSERAAANLC 174
+M H ++V L G +IM+L G+L + + + A
Sbjct: 60 ASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSL 118
Query: 175 RQMVTV-------VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF 227
++M+ + + Y ++ +HRDL N + AED +K DFG++ D +
Sbjct: 119 KKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV---AEDFTVKIGDFGMTRDIYETDYY 175
Query: 228 ----KDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAI 281
K L+ +++PE L+ + +D+WS GV+L+ I P+ G + + + +
Sbjct: 176 RKGGKGLL-PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFV 234
Query: 282 LRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323
+ G + D P++ ++++ +PK R S E+++
Sbjct: 235 MEGGLLDKPDNCPDM---LFELMRMCWQYNPKMRPSFLEIIS 273
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 54.2 bits (130), Expect = 5e-08
Identities = 67/296 (22%), Positives = 125/296 (42%), Gaps = 63/296 (21%)
Query: 70 IFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKL---INRDDVEDVRREVQIMHHLTG 126
+ G+ LG G+FG T K + +++ + L + ++ D+ E ++ +
Sbjct: 3 VLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVN- 61
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGEL--FDRIIAK-----------------GHYSE 167
H ++++L GA + LI++ G L F R K + E
Sbjct: 62 HPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDE 121
Query: 168 RA---------AANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218
RA A + R M Y M ++HRDL N L AE +K +DFGLS
Sbjct: 122 RALTMGDLISFAWQISRGM----QYLAEMKLVHRDLAARNVLV---AEGRKMKISDFGLS 174
Query: 219 VFFKPGDVFKDLVGSAY-----------YVAPEVLRRN-YGAEADIWSAGVILYILLS-G 265
DV+++ +Y ++A E L + Y ++D+WS GV+L+ +++ G
Sbjct: 175 -----RDVYEE---DSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG 226
Query: 266 VPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEV 321
P+ G + +F+ + G+ + N S +++ +P +R + A++
Sbjct: 227 GNPYPGIAPERLFNLLKTGY---RMERPENCSEEMYNLMLTCWKQEPDKRPTFADI 279
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|222407 pfam13833, EF_hand_6, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 48.3 bits (116), Expect = 8e-08
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 459 SGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508
G IT EEL+ AL + + + + E D D DG+I++EEF ++++
Sbjct: 2 KGLITREELKRALALLGISLSEEEVDILFREFDTDGDGKISFEEFCVLLQR 52
|
Length = 53 |
| >gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 54.1 bits (130), Expect = 9e-08
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 173 LCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK---PGDVFKD 229
+ RQ+++ + Y H G++HRD+K EN + + ED L DFG + F +
Sbjct: 265 VARQLLSAIDYIHGEGIIHRDIKTEN-VLVNGPEDICLG--DFGAACFARGSWSTPFHYG 321
Query: 230 LVGSAYYVAPEVLRRN-YGAEADIWSAGVILY 260
+ G+ APEVL + Y DIWSAG++++
Sbjct: 322 IAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIF 353
|
Length = 461 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 52.7 bits (126), Expect = 1e-07
Identities = 59/232 (25%), Positives = 107/232 (46%), Gaps = 28/232 (12%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTH-KDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHL 124
R + ++LG GQFG ++ T+ K TK A K++ + VE E +M L
Sbjct: 5 RESLKLEKKLGAGQFGEVWMATYNKHTK--VAVKTMKPGSM----SVEAFLAEANVMKTL 58
Query: 125 TGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAA----ANLCRQMVTV 180
H +V+L A + + +I + A G L D + K + + Q+
Sbjct: 59 Q-HDKLVKLH-AVVTKEPIYIITEFMAKGSLLDFL--KSDEGSKQPLPKLIDFSAQIAEG 114
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YV 237
+ + +HRDL+ N L S+S K DFGL+ + + + G+ + +
Sbjct: 115 MAFIEQRNYIHRDLRAANILVSASL---VCKIADFGLARVIEDNE-YTAREGAKFPIKWT 170
Query: 238 APEVLRRNYGA---EADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
APE + N+G+ ++D+WS G++L +++ G P+ G + + A+ RG+
Sbjct: 171 APEAI--NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY 220
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 52.4 bits (125), Expect = 2e-07
Identities = 60/251 (23%), Positives = 111/251 (44%), Gaps = 25/251 (9%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG+G FG ++ T T + A K++ ++ E +E QIM L H +V L
Sbjct: 13 KLGQGCFGEVWMGTWNGTTK-VAIKTLKPGTMMP----EAFLQEAQIMKKLR-HDKLVPL 66
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKG---HYSERAAANLCRQMVTVVHYCHSMGVM 190
+ + ++ + G L D + +G + ++ Q+ + Y M +
Sbjct: 67 YAVVSEE-PIYIVTEFMGKGSLLD-FLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYI 124
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPE-VLRRNY 246
HRDL+ N L ++ K DFGL+ + + + G+ + + APE L +
Sbjct: 125 HRDLRAANILV---GDNLVCKIADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRF 180
Query: 247 GAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPN-ISSSAKDIV 304
++D+WS G++L L++ G P+ G + + + + RG+ P P S +++
Sbjct: 181 TIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGY----RMPCPQGCPESLHELM 236
Query: 305 KKMLHADPKER 315
K DP ER
Sbjct: 237 KLCWKKDPDER 247
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 52.7 bits (126), Expect = 2e-07
Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 29/195 (14%)
Query: 151 AGGELFDRIIAKGHYSERAAANLCRQMVTVVHY-CHSMGV------------MHRDLKPE 197
+ G + ++ ++ E +L ++++T+ C+S V +HRDL
Sbjct: 149 SSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAAR 208
Query: 198 NFLFSSSAEDSPLKATDFGLS--VFFKPGDVFK-DLVGSAYYVAPE-VLRRNYGAEADIW 253
N L S E++ +K DFGL+ ++ P V K D ++APE + R Y ++D+W
Sbjct: 209 NILLS---ENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW 265
Query: 254 SAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKML---H 309
S GV+L+ + S G P+ G F L+ + P+ ++ ++ + ML H
Sbjct: 266 SFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA---PDYTTP--EMYQTMLDCWH 320
Query: 310 ADPKERLSAAEVLNH 324
+P +R + +E++ H
Sbjct: 321 GEPSQRPTFSELVEH 335
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 2e-07
Identities = 62/261 (23%), Positives = 114/261 (43%), Gaps = 23/261 (8%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
E R + ++LG GQFG ++ T + A K++ + E E QIM
Sbjct: 2 EIPRESLQLIKKLGNGQFGEVWMGTWNGNTK-VAVKTLKPGTM----SPESFLEEAQIMK 56
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRII-AKGHYSERAA-ANLCRQMVTV 180
L H +V+L A + ++ + + G L D + +G + ++ Q+
Sbjct: 57 KLR-HDKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAG 114
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YV 237
+ Y M +HRDL+ N L K DFGL+ + + + G+ + +
Sbjct: 115 MAYIERMNYIHRDLRSANILVGDGL---VCKIADFGLARLIEDNE-YTARQGAKFPIKWT 170
Query: 238 APE-VLRRNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWP- 294
APE L + ++D+WS G++L L++ G P+ G + + + + RG+ P P
Sbjct: 171 APEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGY----RMPCPQ 226
Query: 295 NISSSAKDIVKKMLHADPKER 315
+ S +++ + DP+ER
Sbjct: 227 DCPISLHELMLQCWKKDPEER 247
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 3e-07
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Query: 416 EAADVDGNGTIDYIEFI----TATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHAL 471
+ D DG+G ID E + + E EE + F DKD G I+ EE A+
Sbjct: 1 KLLDKDGDGYIDVEELRKLLKALGLKLTDEEVEELIEADFNEIDKDGDGRISFEEFLEAM 60
|
Length = 60 |
| >gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 52.3 bits (125), Expect = 3e-07
Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 14/178 (7%)
Query: 95 FACKSISSRK--LINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152
FAC + + +I E I+ + H +I++LKG + LI+
Sbjct: 109 FACIDNKTCEHVVIKAGQRGGTATEAHILRAIN-HPSIIQLKGTFTYNKFTCLILPRYKT 167
Query: 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKA 212
+L+ + AK + + + R ++ + Y H ++HRD+K EN + + +
Sbjct: 168 -DLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGD---VCL 223
Query: 213 TDFGLSVFFKPGDV----FKDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSG 265
DFG + F P D+ + G+ APE+L R+ YG DIWSAG++L+ + +
Sbjct: 224 GDFGAACF--PVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATC 279
|
Length = 391 |
| >gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 52.7 bits (126), Expect = 3e-07
Identities = 88/402 (21%), Positives = 146/402 (36%), Gaps = 105/402 (26%)
Query: 6 GLPSSQTQLHSTTADPDTGPGHHPNGLKIDPPGPPRPSSSATSATSSSVGR---VLGKPM 62
S +T+ H A +++ PP + + A S G VLG+ +
Sbjct: 65 STDSGRTKSHEGAATTKQATTTPTTNVEVAPPPKKKKVTYALPNQSREEGHFYVVLGEDI 124
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRD------------- 109
+ + LG G FG + K+ A K + + RD
Sbjct: 125 DVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQ 184
Query: 110 -DVEDVRREVQIMHHL---TGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHY 165
D D ++I + TGH IV K G L D I+ G +
Sbjct: 185 ADPADRFPLMKIQRYFQNETGHMCIVMPK----------------YGPCLLDWIMKHGPF 228
Query: 166 SERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224
S R A + Q + Y H+ + +MH DLKPEN L +S + T+ L P
Sbjct: 229 SHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETS-DTVVDPVTNRAL-----PP 282
Query: 225 DVFK----DL-------------VGSAYYVAPEV-LRRNYGAEADIWSAGVILYILLSG- 265
D + DL V + +Y +PEV L + D+WS G I+Y L +G
Sbjct: 283 DPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGK 342
Query: 266 ---------------------VPPFWG-----ETEQSIFDAILRGHIDFSSDPWPNISSS 299
+P W E + ++++ G + +DP +++
Sbjct: 343 LLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSA--GQLRPCTDP-KHLARI 399
Query: 300 AK--------------DIVKKMLHADPKERLSAAEVLNHPWM 327
A+ D++ +LH D ++RL+A ++ HP++
Sbjct: 400 ARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYV 441
|
Length = 467 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 51.6 bits (124), Expect = 3e-07
Identities = 58/226 (25%), Positives = 96/226 (42%), Gaps = 21/226 (9%)
Query: 71 FGRELGRGQFGVTY----LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
+ LG G FG Y + + K A K + R+ + +++ E +M +
Sbjct: 11 KIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVL--REETSPKANKEILDEAYVMASV-D 67
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCH 185
H ++V L G V LI L G L D + K + + N C Q+ + Y
Sbjct: 68 HPHVVRLLGICLSS-QVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLE 126
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSA-----YYVAPE 240
++HRDL N L + +K TDFGL+ + K+ ++A E
Sbjct: 127 EKRLVHRDLAARNVLVKTP---QHVKITDFGLAKLLDVDE--KEYHAEGGKVPIKWMALE 181
Query: 241 -VLRRNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRG 284
+L R Y ++D+WS GV ++ L++ G P+ G I D + +G
Sbjct: 182 SILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKG 227
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Score = 51.1 bits (122), Expect = 4e-07
Identities = 63/258 (24%), Positives = 103/258 (39%), Gaps = 21/258 (8%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR----REVQIMHHLTGHRN 129
ELG G FG +K K + K+++ + L N ++ ++ RE +M L +
Sbjct: 2 ELGSGNFGTVKKGMYKMKKSE---KTVAVKILKNDNNDPALKDELLREANVMQQLD-NPY 57
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGV 189
IV + G E S L+M+L G L + H +E+ L Q+ + Y
Sbjct: 58 IVRMIGICEAE-SWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNF 116
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSA----YYVAPEVLR-R 244
+HRDL N L + K +DFGLS + + + APE +
Sbjct: 117 VHRDLAARNVLLVTQHY---AKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYY 173
Query: 245 NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303
+ +++D+WS GV+++ S G P+ G + I G + P D+
Sbjct: 174 KFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESG--ERMECP-QRCPPEMYDL 230
Query: 304 VKKMLHADPKERLSAAEV 321
+K ER A V
Sbjct: 231 MKLCWTYGVDERPGFAVV 248
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 51.0 bits (122), Expect = 4e-07
Identities = 63/260 (24%), Positives = 110/260 (42%), Gaps = 27/260 (10%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
R T ++LG GQFG ++ + + A KS+ + E E +M L
Sbjct: 5 RETLKLVKKLGAGQFGEVWMGYYNGH-TKVAIKSLKQGSM----SPEAFLAEANLMKQLQ 59
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRI-IAKGH-YSERAAANLCRQMVTVVHY 183
H +V L A + + +I + G L D + +G + ++ Q+ + +
Sbjct: 60 -HPRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAF 117
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPE 240
+HRDL+ N L S E K DFGL+ + + + G+ + + APE
Sbjct: 118 IERKNYIHRDLRAANILVS---ETLCCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPE 173
Query: 241 VLRRNYGA---EADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP-N 295
+ NYG ++D+WS G++L I+ G P+ G T + + RG+ P P N
Sbjct: 174 AI--NYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGY----RMPRPDN 227
Query: 296 ISSSAKDIVKKMLHADPKER 315
++++ P+ER
Sbjct: 228 CPEELYELMRLCWKEKPEER 247
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 51.4 bits (123), Expect = 4e-07
Identities = 62/280 (22%), Positives = 105/280 (37%), Gaps = 52/280 (18%)
Query: 70 IFGRELGRGQFGVTY---LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
G+ LG G+FG L ++ + A K++ + ++E+ E M
Sbjct: 2 KLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKL-DIHTYSEIEEFLSEAACMKDFD- 59
Query: 127 HRNIVELKGA---------------------YEDRHSVNLIMDLCAGGELFDRIIAKGHY 165
H N+++L G + D HS L L E
Sbjct: 60 HPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKL--------- 110
Query: 166 SERAAANLCRQMVTV---VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222
L + MV + + Y + +HRDL N + ED + DFGLS
Sbjct: 111 ---PLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCML---REDMTVCVADFGLSKKIY 164
Query: 223 PGDVFKDLVGSAY---YVAPEVLRRN-YGAEADIWSAGVILY-ILLSGVPPFWGETEQSI 277
GD ++ + ++A E L Y +++D+W+ GV ++ I G P+ G I
Sbjct: 165 SGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEI 224
Query: 278 FDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLS 317
+D + G+ P + D++ ADPK+R +
Sbjct: 225 YDYLRHGN--RLKQP-EDCLDELYDLMYSCWRADPKDRPT 261
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands | Back alignment and domain information |
|---|
Score = 46.4 bits (111), Expect = 6e-07
Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 357 KVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGL 399
K ALK + E LSEEEI EM + +D D G I FEE +
Sbjct: 23 KAALKSLGEGLSEEEI---DEMIREVDKDGDGKIDFEEFLELM 62
|
Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63 |
| >gnl|CDD|197477 smart00027, EH, Eps15 homology domain | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 6e-07
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
+S E+ +++F+S+D + GT+T + K L K G L ++ + ++ AD+D +G +
Sbjct: 4 ISPEDKAKYEQIFRSLDKNQDGTVTGAQAKPILLKSG--LPQTLLAKIWNLADIDNDGEL 61
Query: 427 DYIEFITATMHMN 439
D EF A MH+
Sbjct: 62 DKDEFALA-MHLI 73
|
Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences. Length = 96 |
| >gnl|CDD|238009 cd00052, EH, Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction | Back alignment and domain information |
|---|
Score = 46.4 bits (111), Expect = 7e-07
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 376 KEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITAT 435
++F+S+D D G I+ +E + L + L S + Q+ + AD D +G +D EF A
Sbjct: 2 DQIFRSLDPDGDGLISGDEARPFL--GKSGLPRSVLAQIWDLADTDKDGKLDKEEFAIA- 58
Query: 436 MHM 438
MH+
Sbjct: 59 MHL 61
|
The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs. Length = 67 |
| >gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Score = 50.7 bits (121), Expect = 7e-07
Identities = 66/281 (23%), Positives = 124/281 (44%), Gaps = 49/281 (17%)
Query: 73 RELGRGQFGVTYLVTHKDT-----KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH 127
RELG+G FG+ Y +D + + A K+++ + R+ +E + E +M T H
Sbjct: 12 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL-RERIEFL-NEASVMKGFTCH 69
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSE----RAAANLCRQMVTV--- 180
++V L G ++M+L A G+L + + +E R L ++M+ +
Sbjct: 70 -HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL-QEMIQMAAE 127
Query: 181 ----VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYY 236
+ Y ++ +HRDL N + A D +K DFG++ +D+ + YY
Sbjct: 128 IADGMAYLNAKKFVHRDLAARNCMV---AHDFTVKIGDFGMT---------RDIYETDYY 175
Query: 237 ------------VAPEVLRRN-YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAIL 282
+APE L+ + +D+WS GV+L+ + S P+ G + + + ++
Sbjct: 176 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 235
Query: 283 RGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323
G D N D+++ +PK R + E++N
Sbjct: 236 DGG---YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVN 273
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288 |
| >gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 50.8 bits (121), Expect = 1e-06
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 175 RQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL--VG 232
+Q++ V Y H ++HRD+K EN + D + DFG ++ F+ D VG
Sbjct: 274 KQLLCAVEYIHDKKLIHRDIKLENIFLNC---DGKIVLGDFGTAMPFEKEREAFDYGWVG 330
Query: 233 SAYYVAPEVLRRN-YGAEADIWSAGVILYILLS 264
+ +PE+L + Y DIWS G+IL +LS
Sbjct: 331 TVATNSPEILAGDGYCEITDIWSCGLILLDMLS 363
|
Length = 501 |
| >gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 50.0 bits (119), Expect = 1e-06
Identities = 53/231 (22%), Positives = 93/231 (40%), Gaps = 40/231 (17%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQF---------------ACKSISSRKLINRDD 110
R +LG GQFG +L + +F A K + R + +
Sbjct: 4 RQQLRLKEKLGEGQFGEVHLC-EAEGLAEFLGEGAPEFDGQPVLVAVKML--RADVTKTA 60
Query: 111 VEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAA 170
D +E++IM L + NI+ L G + +I + G+L + + S
Sbjct: 61 RNDFLKEIKIMSRLK-NPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTH 119
Query: 171 AN------------LCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218
AN + Q+ + + Y S+ +HRDL N L + +K DFG+S
Sbjct: 120 ANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYT---IKIADFGMS 176
Query: 219 VFFKPGDVFKDLVGSAY----YVAPE-VLRRNYGAEADIWSAGVILYILLS 264
GD ++ + G A ++A E +L + +D+W+ GV L+ + +
Sbjct: 177 RNLYSGDYYR-IQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFT 226
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 49.3 bits (117), Expect = 2e-06
Identities = 57/234 (24%), Positives = 98/234 (41%), Gaps = 24/234 (10%)
Query: 71 FGRELGRGQFGVTY--LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
G+ LG G+FG + D+ + A K++ + R ++ED E M H
Sbjct: 3 LGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKI-AICTRSEMEDFLSEAVCMKEFD-HP 60
Query: 129 NIVELKGA------YEDRHSVNLIMDLCAGGEL-----FDRIIAKGHY-SERAAANLCRQ 176
N++ L G E S +I+ G+L + R+ Y +
Sbjct: 61 NVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTD 120
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY- 235
+ + + Y S +HRDL N + + E+ + DFGLS GD ++ +
Sbjct: 121 IASGMEYLSSKSFIHRDLAARNCMLN---ENMNVCVADFGLSKKIYNGDYYRQGRIAKMP 177
Query: 236 --YVAPEVLR-RNYGAEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGH 285
++A E L R Y ++D+WS GV ++ I G P+ G I+D + +G+
Sbjct: 178 VKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGN 231
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Score = 49.5 bits (118), Expect = 2e-06
Identities = 58/255 (22%), Positives = 106/255 (41%), Gaps = 47/255 (18%)
Query: 66 RNTYIFGRELGRGQFGVTYLVT----HKDTKQQFACKSISSRKLI----------NRDDV 111
R +F +LG GQFG +L QF R L+ N++
Sbjct: 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNAR 63
Query: 112 EDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
D +EV+I+ L NI+ L G D + +I + G+L ++ ++ H ++
Sbjct: 64 NDFLKEVKILSRLK-DPNIIRLLGVCVDEDPLCMITEYMENGDL-NQFLSSHHLDDKEEN 121
Query: 172 --------------------NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLK 211
++ Q+ + + Y S+ +HRDL N L E+ +K
Sbjct: 122 GNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLV---GENLTIK 178
Query: 212 ATDFGLSVFFKPGDVFKDLVGSAY----YVAPE-VLRRNYGAEADIWSAGVILY--ILLS 264
DFG+S GD ++ + G A ++A E +L + +D+W+ GV L+ ++L
Sbjct: 179 IADFGMSRNLYAGDYYR-IQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLC 237
Query: 265 GVPPFWGETEQSIFD 279
P+ T++ + +
Sbjct: 238 KEQPYGELTDEQVIE 252
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304 |
| >gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Score = 49.2 bits (117), Expect = 2e-06
Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 142 SVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFL 200
+V L+ L G L D + K + N C Q+ + Y + ++HRDL N L
Sbjct: 82 TVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVL 141
Query: 201 FSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSA----YYVAPEVLRRNYGAEADIWSAG 256
S +K TDFGL+ + G + +L R + ++D+WS G
Sbjct: 142 VKSPNH---VKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYG 198
Query: 257 VILYILLS-GVPPFWGETEQSIFDAILRG 284
V ++ L++ G P+ G + I D + +G
Sbjct: 199 VTVWELMTFGAKPYDGIPAREIPDLLEKG 227
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279 |
| >gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 49.2 bits (117), Expect = 2e-06
Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 26/160 (16%)
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD----LV 231
Q+ + + S +HRDL N L S E++ +K DFGL+ D++KD
Sbjct: 182 QVARGMEFLASRKCIHRDLAARNILLS---ENNVVKICDFGLA-----RDIYKDPDYVRK 233
Query: 232 GSAY----YVAPE-VLRRNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
GSA ++APE + + Y ++D+WS GV+L+ + S G P+ G F L+
Sbjct: 234 GSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLK-- 291
Query: 286 IDFSSDPWPNISSSAKDIVKKML---HADPKERLSAAEVL 322
D + P ++ I + ML DPKER + + ++
Sbjct: 292 -DGTRMRAPENATPE--IYRIMLACWQGDPKERPTFSALV 328
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338 |
| >gnl|CDD|185503 PTZ00183, PTZ00183, centrin; Provisional | Back alignment and domain information |
|---|
Score = 46.6 bits (111), Expect = 3e-06
Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 18/128 (14%)
Query: 357 KVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEE-LKAGLPKLGTRLSESEVRQLM 415
KVA++ + +EEI K+M +D D SG I FEE L KLG R E+ +
Sbjct: 40 KVAMRSLGFEPKKEEI---KQMIADVDKDGSGKIDFEEFLDIMTKKLGERDPREEILKAF 96
Query: 416 EAADVDGNGTIDYIEFITATMHMNRVERE-------EHLYKAFEYFDKDNSGYITMEELE 468
D D G I ++ RV +E E L + + D++ G I+ EE
Sbjct: 97 RLFDDDKTGKISL-------KNLKRVAKELGETITDEELQEMIDEADRNGDGEISEEEFY 149
Query: 469 HALKKYNM 476
+KK N+
Sbjct: 150 RIMKKTNL 157
|
Length = 158 |
| >gnl|CDD|214801 smart00750, KIND, kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 3e-06
Identities = 40/167 (23%), Positives = 63/167 (37%), Gaps = 22/167 (13%)
Query: 166 SERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225
+E +C Q + + H L + L G SV FK +
Sbjct: 15 NEEEIWAVCLQCLGALRELHRQAKSGNILLTWDGLLKL-----------DG-SVAFKTPE 62
Query: 226 VFKDLVGSAYYVAPEVL-RRNYGAEADIWSAGVILYILLSGVPPFWGETEQS-IFDAILR 283
Y++APEV+ ++Y +ADI+S G+ LY L P+ E E S I + +L
Sbjct: 63 ---QSRPDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLN 119
Query: 284 GHIDFSSDPWPNISS-----SAKDIVKKMLHADPKERLSAAEVLNHP 325
G N+ S +D ++ P+ R +A L H
Sbjct: 120 GMPADDPRDRSNLEGVSAARSFEDFMRLCASRLPQRREAANHYLAHC 166
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features. Length = 176 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 48.4 bits (115), Expect = 4e-06
Identities = 37/164 (22%), Positives = 75/164 (45%), Gaps = 10/164 (6%)
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYC 184
H NIV L+G +++ ++ + + G L D + K G + + + + Y
Sbjct: 65 HSNIVRLEGVITRGNTMMIVTEYMSNGAL-DSFLRKHEGQLVAGQLMGMLPGLASGMKYL 123
Query: 185 HSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS--AYYVAPEVL 242
MG +H+ L L +S D K + F K ++ + G + APE +
Sbjct: 124 SEMGYVHKGLAAHKVLVNS---DLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAI 180
Query: 243 R-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRG 284
+ ++ + +D+WS G++++ ++S G P+W + Q + A+ G
Sbjct: 181 QYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDG 224
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|197492 smart00054, EFh, EF-hand, calcium binding motif | Back alignment and domain information |
|---|
Score = 42.8 bits (102), Expect = 4e-06
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 482 IKEIIAEVDIDNDGRINYEEFAAMMRK 508
+KE D D DG+I++EEF +++
Sbjct: 2 LKEAFRLFDKDGDGKIDFEEFKDLLKA 28
|
EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions. Length = 29 |
| >gnl|CDD|200946 pfam00036, efhand, EF hand | Back alignment and domain information |
|---|
Score = 42.8 bits (102), Expect = 5e-06
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 482 IKEIIAEVDIDNDGRINYEEFAAMMRK 508
+KE E D D DG+I++EEF +++K
Sbjct: 2 LKEAFKEFDKDGDGKISFEEFKELLKK 28
|
The EF-hands can be divided into two classes: signaling proteins and buffering/transport proteins. The first group is the largest and includes the most well-known members of the family such as calmodulin, troponin C and S100B. These proteins typically undergo a calcium-dependent conformational change which opens a target binding site. The latter group is represented by calbindin D9k and do not undergo calcium dependent conformational changes. Length = 29 |
| >gnl|CDD|197492 smart00054, EFh, EF-hand, calcium binding motif | Back alignment and domain information |
|---|
Score = 42.8 bits (102), Expect = 6e-06
Identities = 14/28 (50%), Positives = 15/28 (53%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKL 402
LKE F+ D D G I FEE K L L
Sbjct: 2 LKEAFRLFDKDGDGKIDFEEFKDLLKAL 29
|
EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions. Length = 29 |
| >gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Score = 47.7 bits (114), Expect = 6e-06
Identities = 69/292 (23%), Positives = 110/292 (37%), Gaps = 53/292 (18%)
Query: 66 RNTYIFGRELGRGQFGVTYL-----VTHKDTKQQFACKSISSRKLIN----RDDV----- 111
R F +LG GQFG +L + K + + L+ R D
Sbjct: 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAR 63
Query: 112 EDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM------DLCAGGELFDRIIAKGHY 165
ED +EV+I+ L+ NI L G + +IM DL L +
Sbjct: 64 EDFLKEVKILSRLS-DPNIARLLGVCTVDPPLCMIMEYMENGDLNQ--FLQKHVAETSGL 120
Query: 166 SERAAA-------NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218
+ + + + Q+ + + Y S+ +HRDL N L + +K DFG+S
Sbjct: 121 ACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKNYT---IKIADFGMS 177
Query: 219 VFFKPGDVFKDLVGSAYYVAP-------EVLRRNYGAEADIWSAGVILY-IL-LSGVPPF 269
D ++ + G A P VL + ++D+W+ GV L+ IL L P+
Sbjct: 178 RNLYSSDYYR-VQGRA--PLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPY 234
Query: 270 WGETEQSIFDAILRGHIDFSSD---PWPNISSSAKDIVKKML---HADPKER 315
T+Q + + D P P KDI + ML D ++R
Sbjct: 235 EHLTDQQVIENAGHFFRDDGRQIYLPRPPNCP--KDIYELMLECWRRDEEDR 284
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296 |
| >gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 47.9 bits (114), Expect = 8e-06
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 7/105 (6%)
Query: 66 RNTYIFGRELGRGQFG-----VTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
R+ FG+ LG G FG + + +D + A K + + + D+ E + E++I
Sbjct: 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA--HTDEREALMSELKI 94
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHY 165
+ HL H+NIV L GA V +I + C G+L + + K
Sbjct: 95 LSHLGQHKNIVNLLGACTHGGPVLVITEYCCYGDLLNFLRKKAET 139
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374 |
| >gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Score = 47.1 bits (112), Expect = 9e-06
Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 36/218 (16%)
Query: 73 RELGRGQFGVTY---LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN 129
R +G+G FG Y L+ K A KS++ ++ + ++VE +E IM + H N
Sbjct: 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLN--RITDLEEVEQFLKEGIIMKDFS-HPN 57
Query: 130 IVELKG-AYEDRHSVNLIMDLCAGGELFDRIIAKGHY-SERAAANLCRQMVTVVHYCHSM 187
++ L G S +++ G+L + I ++ H + + Q+ + Y S
Sbjct: 58 VLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASK 117
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYY----------- 236
+HRDL N + E +K DFGL+ +D+ YY
Sbjct: 118 KFVHRDLAARNCMLD---ESFTVKVADFGLA---------RDIYDKEYYSVHNHTGAKLP 165
Query: 237 ---VAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPF 269
+A E L+ + + ++D+WS GV+L+ L++ G PP+
Sbjct: 166 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 203
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262 |
| >gnl|CDD|200946 pfam00036, efhand, EF hand | Back alignment and domain information |
|---|
Score = 41.3 bits (98), Expect = 1e-05
Identities = 16/28 (57%), Positives = 17/28 (60%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKL 402
LKE FK D D G I+FEE K L KL
Sbjct: 2 LKEAFKEFDKDGDGKISFEEFKELLKKL 29
|
The EF-hands can be divided into two classes: signaling proteins and buffering/transport proteins. The first group is the largest and includes the most well-known members of the family such as calmodulin, troponin C and S100B. These proteins typically undergo a calcium-dependent conformational change which opens a target binding site. The latter group is represented by calbindin D9k and do not undergo calcium dependent conformational changes. Length = 29 |
| >gnl|CDD|205583 pfam13405, EF_hand_4, EF-hand domain | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 1e-05
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 447 LYKAFEYFDKDNSGYITMEELEHALKKYN 475
L +AF+ FDKD GYI+ EEL AL+
Sbjct: 2 LREAFKLFDKDGDGYISAEELRKALRSLG 30
|
Length = 30 |
| >gnl|CDD|185504 PTZ00184, PTZ00184, calmodulin; Provisional | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 3e-05
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
Query: 449 KAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---IKEIIAEVDIDNDGRINYEEFAAM 505
+AF FDKD G IT +EL ++ ++G T ++++I EVD D +G I++ EF +
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTL 72
Query: 506 MRK 508
M +
Sbjct: 73 MAR 75
|
Length = 149 |
| >gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Score = 46.2 bits (109), Expect = 3e-05
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 66 RNTYIFGRELGRGQFG-----VTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
R+ + GR LG G FG + ++H + + A K + S + + + E++I
Sbjct: 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA--RSSEKQALMSELKI 93
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH 164
M HL H NIV L GA + +I + C G+L D + H
Sbjct: 94 MSHLGPHLNIVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKH 137
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401 |
| >gnl|CDD|238009 cd00052, EH, Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 4e-05
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 449 KAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507
+ F D D G I+ +E L K + + +I D D DG+++ EEFA M
Sbjct: 3 QIFRSLDPDGDGLISGDEARPFLGKSGL-PRSVLAQIWDLADTDKDGKLDKEEFAIAMH 60
|
The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs. Length = 67 |
| >gnl|CDD|178763 PLN03224, PLN03224, probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 4e-05
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 175 RQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVG-- 232
RQ++T + H +G++HRD+KPEN L + D +K DFG +V G F L G
Sbjct: 316 RQVLTGLRKLHRIGIVHRDIKPENLLVTV---DGQVKIIDFGAAVDMCTGINFNPLYGML 372
Query: 233 SAYYVAPEVL 242
Y PE L
Sbjct: 373 DPRYSPPEEL 382
|
Length = 507 |
| >gnl|CDD|197477 smart00027, EH, Eps15 homology domain | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 5e-05
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEE 501
+ E ++++ DK+ G +T + + L K + + +I DIDNDG ++ +E
Sbjct: 10 AKYEQIFRSL---DKNQDGTVTGAQAKPILLKSGLPQT-LLAKIWNLADIDNDGELDKDE 65
Query: 502 FAAMMR 507
FA M
Sbjct: 66 FALAMH 71
|
Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences. Length = 96 |
| >gnl|CDD|205583 pfam13405, EF_hand_4, EF-hand domain | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 5e-05
Identities = 14/29 (48%), Positives = 17/29 (58%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLG 403
L+E FK D D G I+ EEL+ L LG
Sbjct: 2 LREAFKLFDKDGDGYISAEELRKALRSLG 30
|
Length = 30 |
| >gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Score = 44.5 bits (105), Expect = 7e-05
Identities = 53/232 (22%), Positives = 97/232 (41%), Gaps = 41/232 (17%)
Query: 66 RNTYIFGRELGRGQFGVTYLV----THKDTKQQFACKSISSRKLI----------NRDDV 111
R F +LG GQFG +L K + F+ ++ ++ N++
Sbjct: 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNAR 63
Query: 112 EDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAA- 170
D +E++IM L NI+ L + +I + G+L ++ +++ E A
Sbjct: 64 NDFLKEIKIMSRLK-DPNIIRLLAVCITSDPLCMITEYMENGDL-NQFLSRHEPQEAAEK 121
Query: 171 --------ANLC---RQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219
+ L Q+ + + Y S+ +HRDL N L ++ +K DFG+S
Sbjct: 122 ADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLV---GKNYTIKIADFGMSR 178
Query: 220 FFKPGDVFKDLVGSAYYVAP-------EVLRRNYGAEADIWSAGVILYILLS 264
GD ++ + G A V P +L + +D+W+ GV L+ +L+
Sbjct: 179 NLYSGDYYR-IQGRA--VLPIRWMSWESILLGKFTTASDVWAFGVTLWEILT 227
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296 |
| >gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 9e-05
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 9/149 (6%)
Query: 142 SVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFL 200
+V LI L G L D + K + + N C Q+ ++Y ++HRDL N L
Sbjct: 82 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVL 141
Query: 201 FSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPE-VLRRNYGAEADIWSAG 256
+ +K TDFGL+ + G ++A E +L R Y ++D+WS G
Sbjct: 142 VKTPQH---VKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 198
Query: 257 VILYILLS-GVPPFWGETEQSIFDAILRG 284
V ++ L++ G P+ G I + +G
Sbjct: 199 VTVWELMTFGSKPYDGIPASEISSILEKG 227
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316 |
| >gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 43.3 bits (102), Expect = 2e-04
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 18/92 (19%)
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD----LVGSAY----YVAPE- 240
+HRDL N L S E++ +K DFGL+ D++KD G A ++APE
Sbjct: 195 IHRDLAARNILLS---ENNVVKICDFGLA-----RDIYKDPDYVRKGDARLPLKWMAPES 246
Query: 241 VLRRNYGAEADIWSAGVILYILLS-GVPPFWG 271
+ + Y ++D+WS GV+L+ + S G P+ G
Sbjct: 247 IFDKVYTTQSDVWSFGVLLWEIFSLGASPYPG 278
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337 |
| >gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 2e-04
Identities = 57/219 (26%), Positives = 96/219 (43%), Gaps = 15/219 (6%)
Query: 75 LGRGQFGVTY---LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
LG G FG Y V +T + I + + +VE E IM + H ++V
Sbjct: 15 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE-FMDEALIMASMD-HPHLV 72
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVM 190
L G ++ L+ L G L D + K + + N C Q+ + Y ++
Sbjct: 73 RLLGVCLSP-TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLV 131
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLR-RNY 246
HRDL N L S + +K TDFGL+ + + + G ++A E + R +
Sbjct: 132 HRDLAARNVLVKSP---NHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKF 188
Query: 247 GAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRG 284
++D+WS GV ++ L++ G P+ G + I D + +G
Sbjct: 189 THQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKG 227
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303 |
| >gnl|CDD|200946 pfam00036, efhand, EF hand | Back alignment and domain information |
|---|
Score = 37.8 bits (89), Expect = 3e-04
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 447 LYKAFEYFDKDNSGYITMEELEHALKK 473
L +AF+ FDKD G I+ EE + LKK
Sbjct: 2 LKEAFKEFDKDGDGKISFEEFKELLKK 28
|
The EF-hands can be divided into two classes: signaling proteins and buffering/transport proteins. The first group is the largest and includes the most well-known members of the family such as calmodulin, troponin C and S100B. These proteins typically undergo a calcium-dependent conformational change which opens a target binding site. The latter group is represented by calbindin D9k and do not undergo calcium dependent conformational changes. Length = 29 |
| >gnl|CDD|205383 pfam13202, EF_hand_3, EF hand | Back alignment and domain information |
|---|
Score = 37.3 bits (88), Expect = 4e-04
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 375 LKEMFKSMDTDNSGTITFEELKA 397
LK++F+ DT+ G I+ EELK
Sbjct: 1 LKDLFRQFDTNGDGKISKEELKR 23
|
Length = 25 |
| >gnl|CDD|222407 pfam13833, EF_hand_6, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 37.9 bits (89), Expect = 5e-04
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 357 KVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGL 399
K AL ++ +LSEEE+ +F+ DTD G I+FEE L
Sbjct: 11 KRALALLGISLSEEEV---DILFREFDTDGDGKISFEEFCVLL 50
|
Length = 53 |
| >gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 8e-04
Identities = 22/100 (22%), Positives = 36/100 (36%), Gaps = 6/100 (6%)
Query: 104 KLINRDDV-EDVRREVQIMHHLTGHRNIV-ELKGAYEDRHSVNLIMDLCAGGELFDRIIA 161
K+ + D REV I+ L V ++ + E L+M+ G L +
Sbjct: 27 KINPSREKGADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLDEVSEE 86
Query: 162 KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLF 201
+ A L ++ H + + H DL P N L
Sbjct: 87 EKEDIAEQLAELLAKL----HQLPLLVLCHGDLHPGNILV 122
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155 |
| >gnl|CDD|173767 cd08227, PK_STRAD_alpha, Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 8e-04
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHY----SERAAANLCRQMVT 179
L H NIV + + + + ++ A G D I H+ SE A A + + ++
Sbjct: 55 LFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICT--HFMDGMSELAIAYILQGVLK 112
Query: 180 VVHYCHSMGVMHRDLKPENFLFSS------SAEDSPLKATDFG--LSVFFKPGDVFKDLV 231
+ Y H MG +HR +K + L S S S L + G L V D K V
Sbjct: 113 ALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVH---DFPKYSV 169
Query: 232 GSAYYVAPEVLRRN---YGAEADIWSAGVILYILLSGVPPF 269
+++PEVL++N Y A++DI+S G+ L +G PF
Sbjct: 170 KVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPF 210
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha, stabilized through ATP and MO25, may be needed to activate LKB1. A mutation which results in a truncation of a C-terminal part of the human STRAD-alpha pseudokinase domain and disrupts its association with LKB1, leads to PMSE (polyhydramnios, megalencephaly, symptomatic epilepsy) syndrome. Several splice variants of STRAD-alpha exist which exhibit different effects on the localization and activation of LKB1. Length = 327 |
| >gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.001
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 25/102 (24%)
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY 235
Q+ + Y H GV+H+D+ N + E+ +K TD LS +DL Y
Sbjct: 125 QIACGMSYLHKRGVIHKDIAARNCVI---DEELQVKITDNALS---------RDLFPMDY 172
Query: 236 ------------YVAPEVLRRN-YGAEADIWSAGVILYILLS 264
++A E L Y + +D+WS GV+L+ L++
Sbjct: 173 HCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMT 214
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280 |
| >gnl|CDD|197492 smart00054, EFh, EF-hand, calcium binding motif | Back alignment and domain information |
|---|
Score = 35.0 bits (82), Expect = 0.002
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 449 KAFEYFDKDNSGYITMEELEHALKK 473
+AF FDKD G I EE + LK
Sbjct: 4 EAFRLFDKDGDGKIDFEEFKDLLKA 28
|
EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions. Length = 29 |
| >gnl|CDD|200946 pfam00036, efhand, EF hand | Back alignment and domain information |
|---|
Score = 35.1 bits (82), Expect = 0.002
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 410 EVRQLMEAADVDGNGTIDYIEFITATMHM 438
E+++ + D DG+G I + EF +
Sbjct: 1 ELKEAFKEFDKDGDGKISFEEFKELLKKL 29
|
The EF-hands can be divided into two classes: signaling proteins and buffering/transport proteins. The first group is the largest and includes the most well-known members of the family such as calmodulin, troponin C and S100B. These proteins typically undergo a calcium-dependent conformational change which opens a target binding site. The latter group is represented by calbindin D9k and do not undergo calcium dependent conformational changes. Length = 29 |
| >gnl|CDD|173766 cd08226, PK_STRAD_beta, Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 0.002
Identities = 50/219 (22%), Positives = 93/219 (42%), Gaps = 36/219 (16%)
Query: 74 ELGRGQFGVT--YLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
E+GRG +T YL H T + I+ + + ++ ++ EV ++ H H NI+
Sbjct: 5 EIGRGFCNLTSVYLARHTPTGTLVTVR-ITDLENCTEEHLKALQNEV-VLSHFFRHPNIM 62
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQM----VTVVHYCHSM 187
+ + +I A G + K ++ E + L + + ++Y H
Sbjct: 63 TSWTVFTTGSWLWVISPFMAYGSA--NSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN 120
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF---KPGDVFKDLVGSAY--------- 235
G +HR++K + L S D + + GLS + + G K Y
Sbjct: 121 GYIHRNIKASHILIS---GDGLVSLS--GLSHLYSLVRNGQKAK----VVYDFPQFSTSV 171
Query: 236 --YVAPEVLRRN---YGAEADIWSAGVILYILLSGVPPF 269
+++PE+LR++ Y ++DI+S G+ L +G PF
Sbjct: 172 LPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPF 210
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. STRAD-beta is also referred to as ALS2CR2 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 2 protein), since the human gene encoding it is located within the juvenile ALS2 critical region on chromosome 2q33-q34. It is not linked to the development of ALS2. Length = 328 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.002
Identities = 70/269 (26%), Positives = 110/269 (40%), Gaps = 42/269 (15%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+ RG+ G +Y QF K I+ I ++ D+ + H NIV+L
Sbjct: 698 ISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSSEIADMGK--------LQHPNIVKLI 749
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVH-YCHSMGVMHRD 193
G LI + G L + + R A + + +H C S V+ +
Sbjct: 750 GLCRSEKGAYLIHEYIEGKNLSEVLRNLSWERRRKIAIGIAKALRFLHCRC-SPAVVVGN 808
Query: 194 LKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVL-RRNYGAE 249
L PE + +D P LS+ PG + K + SAY VAPE ++ +
Sbjct: 809 LSPEKIIID--GKDEP----HLRLSL---PGLLCTDTKCFISSAY-VAPETRETKDITEK 858
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG--------HIDFSSDP--WPNISSS 299
+DI+ G+IL LL+G P + E + +I+ H+D DP ++S +
Sbjct: 859 SDIYGFGLILIELLTGKSP--ADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVN 916
Query: 300 AKDIVKKM---LHA---DPKERLSAAEVL 322
+IV+ M LH DP R A +VL
Sbjct: 917 QNEIVEVMNLALHCTATDPTARPCANDVL 945
|
Length = 968 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 520 | |||
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 100.0 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 100.0 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 100.0 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 100.0 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 100.0 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 100.0 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 100.0 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 100.0 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 100.0 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 100.0 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 100.0 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 100.0 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 100.0 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 100.0 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 100.0 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 100.0 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 100.0 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 100.0 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 100.0 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 100.0 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 100.0 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 100.0 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 100.0 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 100.0 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 100.0 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 100.0 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 100.0 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.97 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.97 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.97 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.96 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.96 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.95 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.95 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.94 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.94 | |
| COG5126 | 160 | FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S | 99.94 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.94 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.93 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.92 | |
| KOG0027 | 151 | consensus Calmodulin and related proteins (EF-Hand | 99.91 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.91 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.9 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.89 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.89 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.89 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.88 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.87 | |
| KOG0028 | 172 | consensus Ca2+-binding protein (centrin/caltractin | 99.87 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.86 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.86 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.86 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.86 | |
| PTZ00183 | 158 | centrin; Provisional | 99.84 | |
| PTZ00184 | 149 | calmodulin; Provisional | 99.83 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.83 | |
| KOG0031 | 171 | consensus Myosin regulatory light chain, EF-Hand p | 99.83 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.8 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.79 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.78 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.77 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.77 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.76 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.75 | |
| KOG0034 | 187 | consensus Ca2+/calmodulin-dependent protein phosph | 99.75 | |
| KOG0030 | 152 | consensus Myosin essential light chain, EF-Hand pr | 99.73 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.72 | |
| KOG0044 | 193 | consensus Ca2+ sensor (EF-Hand superfamily) [Signa | 99.72 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.7 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.68 | |
| KOG0037 | 221 | consensus Ca2+-binding protein, EF-Hand protein su | 99.65 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.64 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.61 | |
| KOG0036 | 463 | consensus Predicted mitochondrial carrier protein | 99.6 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.52 | |
| KOG4223 | 325 | consensus Reticulocalbin, calumenin, DNA supercoil | 99.51 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.49 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.49 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.44 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 99.44 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.42 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.41 | |
| KOG4223 | 325 | consensus Reticulocalbin, calumenin, DNA supercoil | 99.41 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.39 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 99.36 | |
| KOG0038 | 189 | consensus Ca2+-binding kinase interacting protein | 99.35 | |
| PLN02964 | 644 | phosphatidylserine decarboxylase | 99.34 | |
| KOG0027 | 151 | consensus Calmodulin and related proteins (EF-Hand | 99.33 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 99.29 | |
| COG5126 | 160 | FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S | 99.25 | |
| PF13499 | 66 | EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A | 99.25 | |
| cd05022 | 89 | S-100A13 S-100A13: S-100A13 domain found in protei | 99.23 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 99.2 | |
| KOG0037 | 221 | consensus Ca2+-binding protein, EF-Hand protein su | 99.2 | |
| COG4248 | 637 | Uncharacterized protein with protein kinase and he | 99.19 | |
| PTZ00183 | 158 | centrin; Provisional | 99.16 | |
| cd05027 | 88 | S-100B S-100B: S-100B domain found in proteins sim | 99.12 | |
| PTZ00184 | 149 | calmodulin; Provisional | 99.12 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 99.12 | |
| PLN02964 | 644 | phosphatidylserine decarboxylase | 99.1 | |
| cd05022 | 89 | S-100A13 S-100A13: S-100A13 domain found in protei | 99.09 | |
| KOG2137 | 700 | consensus Protein kinase [Signal transduction mech | 99.08 | |
| PF13499 | 66 | EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A | 99.08 | |
| KOG0044 | 193 | consensus Ca2+ sensor (EF-Hand superfamily) [Signa | 99.07 | |
| KOG0028 | 172 | consensus Ca2+-binding protein (centrin/caltractin | 99.05 | |
| cd05026 | 93 | S-100Z S-100Z: S-100Z domain found in proteins sim | 99.04 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 99.03 | |
| cd05027 | 88 | S-100B S-100B: S-100B domain found in proteins sim | 99.0 | |
| KOG0377 | 631 | consensus Protein serine/threonine phosphatase RDG | 98.98 | |
| cd05029 | 88 | S-100A6 S-100A6: S-100A6 domain found in proteins | 98.98 | |
| cd05031 | 94 | S-100A10_like S-100A10_like: S-100A10 domain found | 98.96 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 98.96 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 98.96 | |
| cd05025 | 92 | S-100A1 S-100A1: S-100A1 domain found in proteins | 98.94 | |
| cd00052 | 67 | EH Eps15 homology domain; found in proteins implic | 98.93 | |
| smart00027 | 96 | EH Eps15 homology domain. Pair of EF hand motifs t | 98.89 | |
| cd05023 | 89 | S-100A11 S-100A11: S-100A11 domain found in protei | 98.88 | |
| KOG0034 | 187 | consensus Ca2+/calmodulin-dependent protein phosph | 98.88 | |
| smart00027 | 96 | EH Eps15 homology domain. Pair of EF hand motifs t | 98.86 | |
| cd05029 | 88 | S-100A6 S-100A6: S-100A6 domain found in proteins | 98.86 | |
| cd05026 | 93 | S-100Z S-100Z: S-100Z domain found in proteins sim | 98.85 | |
| cd05031 | 94 | S-100A10_like S-100A10_like: S-100A10 domain found | 98.84 | |
| PRK09902 | 216 | hypothetical protein; Provisional | 98.84 | |
| cd00252 | 116 | SPARC_EC SPARC_EC; extracellular Ca2+ binding doma | 98.84 | |
| cd05025 | 92 | S-100A1 S-100A1: S-100A1 domain found in proteins | 98.82 | |
| cd00213 | 88 | S-100 S-100: S-100 domain, which represents the la | 98.82 | |
| PF13833 | 54 | EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A | 98.8 |
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-61 Score=447.32 Aligned_cols=267 Identities=41% Similarity=0.704 Sum_probs=245.2
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcc----cHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRD----DVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~----~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~ 139 (520)
.+.+.|.+.+.||+|+||.|-+|..+.||+.||||++.++...... ....+.+|+++|++|+ |||||+++++|+.
T Consensus 169 s~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~-HP~IV~~~d~f~~ 247 (475)
T KOG0615|consen 169 SFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLS-HPNIVRIKDFFEV 247 (475)
T ss_pred hhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcC-CCCEEEEeeeeec
Confidence 4678899999999999999999999999999999999876654422 2334679999999999 9999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccc
Q 010013 140 RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (520)
Q Consensus 140 ~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~ 219 (520)
.++.||||||+.||+|.+.+..++.+.+.....+++||+.|+.|||+.||+||||||+|||+..+.++..+||+|||+|+
T Consensus 248 ~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK 327 (475)
T KOG0615|consen 248 PDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAK 327 (475)
T ss_pred CCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999887788999999999999
Q ss_pred ccCCCCcccccccCCCccCchhhcc----cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHH-HHHHHHcCCCCCCCCCCC
Q 010013 220 FFKPGDVFKDLVGSAYYVAPEVLRR----NYGAEADIWSAGVILYILLSGVPPFWGETEQS-IFDAILRGHIDFSSDPWP 294 (520)
Q Consensus 220 ~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~ 294 (520)
.........+.+|||.|.|||++.+ .+..++|+||+||+||.+++|.+||.+..... ..++|.++.+.+-...|.
T Consensus 328 ~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~ 407 (475)
T KOG0615|consen 328 VSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWD 407 (475)
T ss_pred ccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhh
Confidence 9887777889999999999999853 24568999999999999999999998876555 899999999999999999
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 295 NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 295 ~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
.++++..+||.+||..||++|||+.++|+||||+-..
T Consensus 408 ~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~ 444 (475)
T KOG0615|consen 408 RISEEALDLINWMLVVDPENRPSADEALNHPWFKDAP 444 (475)
T ss_pred hhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhccc
Confidence 9999999999999999999999999999999998554
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-56 Score=435.34 Aligned_cols=255 Identities=35% Similarity=0.614 Sum_probs=241.3
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
.+|..++.||+|||+.||.+++..+|..||+|++.+.........+.+.+|++|-++|. |||||+++++|++.+++|||
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~-HpnIV~f~~~FEDs~nVYiv 96 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLK-HPNIVQFYHFFEDSNNVYIV 96 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcC-CCcEEeeeeEeecCCceEEE
Confidence 57999999999999999999999999999999999988888888999999999999999 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC-C
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG-D 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~-~ 225 (520)
.|+|..++|..++++.+++++.+++.+++||+.||.|||+++|+|||||..|+++ +++.++||+|||+|..+... +
T Consensus 97 LELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL---~~~~~VKIgDFGLAt~le~~~E 173 (592)
T KOG0575|consen 97 LELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFL---NENMNVKIGDFGLATQLEYDGE 173 (592)
T ss_pred EEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheee---cCcCcEEecccceeeeecCccc
Confidence 9999999999999999999999999999999999999999999999999999999 56778999999999998744 6
Q ss_pred cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Q 010013 226 VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (520)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (520)
...+.+|||.|.|||++.+ ..+..+||||+||++|.||.|++||....-.+.+..|....+.+|. .++.++++||
T Consensus 174 rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~----~ls~~A~dLI 249 (592)
T KOG0575|consen 174 RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPS----HLSAEAKDLI 249 (592)
T ss_pred ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCccccc----ccCHHHHHHH
Confidence 6788999999999999874 5899999999999999999999999999999999999999888776 6799999999
Q ss_pred HHhcccCCCCCCCHHHHHcCCcccc
Q 010013 305 KKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 305 ~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
.+||.+||.+|||++++|.|+||+.
T Consensus 250 ~~lL~~~P~~Rpsl~~vL~h~Ff~~ 274 (592)
T KOG0575|consen 250 RKLLRPNPSERPSLDEVLDHPFFKS 274 (592)
T ss_pred HHHhcCCcccCCCHHHHhcCHhhhC
Confidence 9999999999999999999999954
|
|
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-58 Score=395.85 Aligned_cols=299 Identities=37% Similarity=0.723 Sum_probs=271.4
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
.+.+.|.+.+.||+|.|+.||++.++.+|+.+|+|++....+. ....+.+.+|++|.+.|+ ||||+++.+.+...+..
T Consensus 8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~-~~~~e~l~rEarIC~~Lq-HP~IvrL~~ti~~~~~~ 85 (355)
T KOG0033|consen 8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS-ARDFQKLEREARICRKLQ-HPNIVRLHDSIQEESFH 85 (355)
T ss_pred ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhc-cccHHHHHHHHHHHHhcC-CCcEeehhhhhccccee
Confidence 3557899999999999999999999999999999998765553 346789999999999999 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
|+|+|++.|++|..-+...-.+++..+-.+++||+.||.|+|.+||||||+||.|+++.+.+...-+||+|||+|..+..
T Consensus 86 ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~ 165 (355)
T KOG0033|consen 86 YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVND 165 (355)
T ss_pred EEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCC
Confidence 99999999999988777766789999999999999999999999999999999999999888888899999999999987
Q ss_pred CCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHH
Q 010013 224 GDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (520)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (520)
+..+...+|||.|||||+++. .|+..+|||+.||+||.|+.|.+||++.+...+++.|+.+.++++...|+.++++.++
T Consensus 166 g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~ 245 (355)
T KOG0033|consen 166 GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKS 245 (355)
T ss_pred ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHH
Confidence 777788999999999999975 5999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcccCCCCCCCHHHHHcCCccccCCCCCCCcccHHHHHHHHHHHhhhHHHHHHHHHHH
Q 010013 303 IVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIA 364 (520)
Q Consensus 303 li~~~l~~dp~~Rps~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 364 (520)
|+++||..||.+|+|+.|+|+|||++.......+.-.......+++|-...+++..++..+.
T Consensus 246 LvrrML~~dP~kRIta~EAL~HpWi~~r~~~As~~H~~dtvd~lrkfNarRKLKgavLtav~ 307 (355)
T KOG0033|consen 246 LIRRMLTVNPKKRITADEALKHPWICNRERVASAIHRQDTVDCLKKFNARRKLKGAILTTVI 307 (355)
T ss_pred HHHHHhccChhhhccHHHHhCCchhcchHHHHHHhhhHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999998544333334445678889999999999988877654
|
|
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-54 Score=424.08 Aligned_cols=322 Identities=61% Similarity=1.045 Sum_probs=296.8
Q ss_pred ccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 010013 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (520)
Q Consensus 62 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~ 141 (520)
...+...|.+++.||+|.||.||+++++.||+.+|+|++.+.........+.+.+|+.+|+++.+|||||.++++|++..
T Consensus 30 ~~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~ 109 (382)
T KOG0032|consen 30 SEDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPD 109 (382)
T ss_pred cccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCC
Confidence 45567889999999999999999999999999999999998877666667899999999999999999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCC-CCCeeEeecccccc
Q 010013 142 SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAE-DSPLKATDFGLSVF 220 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~-~~~~kl~Dfg~a~~ 220 (520)
.+++|||+|.||.|.+.+... .+++..+..++.|++.++.|||+.||+||||||+|+|+..... +..+|++|||++..
T Consensus 110 ~~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~ 188 (382)
T KOG0032|consen 110 SVYLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKF 188 (382)
T ss_pred eEEEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceE
Confidence 999999999999999999887 4999999999999999999999999999999999999987544 45899999999999
Q ss_pred cCCCCcccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHH
Q 010013 221 FKPGDVFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (520)
Q Consensus 221 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (520)
...+......+||+.|+|||++. ..|+..+||||+||++|.|++|.+||++.........+..+.+.+....|+.++..
T Consensus 189 ~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~ 268 (382)
T KOG0032|consen 189 IKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISES 268 (382)
T ss_pred ccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHH
Confidence 88877788899999999999998 67999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHcCCccccCCCCCCCcccHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHHHHhhHHHHh
Q 010013 300 AKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMF 379 (520)
Q Consensus 300 ~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~l~~~F 379 (520)
++++|..||..||.+|+|+.++|+|||+.......+.........+.+++..++++++.....+...++ +..+..+|
T Consensus 269 akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 345 (382)
T KOG0032|consen 269 AKDFIRKLLEFDPRKRLTAAQALQHPWIKSIGEATNIPLDISVLSRSKQFLSMSKLKKLALRVLAESLS---ISGLKEMF 345 (382)
T ss_pred HHHHHHHhcccCcccCCCHHHHhcCccccCCcccccccccchhhhhHHHHHHHHHHHHHHHHHHhhhhh---HHHHHHHH
Confidence 999999999999999999999999999998777777777777788888999999998887777777666 78889999
Q ss_pred cccCCCCC
Q 010013 380 KSMDTDNS 387 (520)
Q Consensus 380 ~~~D~~~~ 387 (520)
..+|.+++
T Consensus 346 ~~~~~~~~ 353 (382)
T KOG0032|consen 346 KLMDTDNN 353 (382)
T ss_pred Hhhccccc
Confidence 99999887
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-55 Score=403.58 Aligned_cols=257 Identities=28% Similarity=0.434 Sum_probs=227.6
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC-eEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH-SVNL 145 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~-~~~l 145 (520)
.+...++.||+|..|+||+++|+.|++.+|+|++.. ..++...+++.+|+++++.++ ||+||.+||.|..++ .++|
T Consensus 79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~--~~~~~~~~Qi~rEl~il~~~~-spyIV~~ygaF~~~~~~isI 155 (364)
T KOG0581|consen 79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILL--NIDPALQKQILRELEILRSCQ-SPYIVGFYGAFYSNGEEISI 155 (364)
T ss_pred HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecc--cCCHHHHHHHHHHHHHHhhCC-CCCeeeEeEEEEeCCceEEe
Confidence 456667899999999999999999999999999942 235566788999999999997 999999999999988 4999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
+||||.||+|.+.+...+++++.....++.++++||.|||+ ++||||||||+|||+++ .+.|||||||.+..+..+
T Consensus 156 ~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNs---kGeVKicDFGVS~~lvnS 232 (364)
T KOG0581|consen 156 CMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNS---KGEVKICDFGVSGILVNS 232 (364)
T ss_pred ehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeecc---CCCEEeccccccHHhhhh
Confidence 99999999999999998999999999999999999999995 99999999999999964 666999999999987655
Q ss_pred CcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCC-----CHHHHHHHHHcCCCCCCCCCCCCCCH
Q 010013 225 DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGE-----TEQSIFDAILRGHIDFSSDPWPNISS 298 (520)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (520)
...+++||..|||||.+.+ .|+.++||||||++++|+++|+.||... ...+++..|..+..+-.+. ..+|+
T Consensus 233 -~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~--~~fS~ 309 (364)
T KOG0581|consen 233 -IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPE--GEFSP 309 (364)
T ss_pred -hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCc--ccCCH
Confidence 5578899999999999986 5999999999999999999999999874 5677788887754433221 24899
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 299 ~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
++++||..||++||.+|||+.|+|+|||++....
T Consensus 310 ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~ 343 (364)
T KOG0581|consen 310 EFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFED 343 (364)
T ss_pred HHHHHHHHHhcCCcccCCCHHHHhcCHHHhhccc
Confidence 9999999999999999999999999999986543
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-54 Score=414.54 Aligned_cols=259 Identities=34% Similarity=0.646 Sum_probs=240.0
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
-..+|.+++.||+|+|++|++|+.+.+++.||||++.++....+.-.+.+.+|-.+|.+|.+||.|++|+-.|+|...+|
T Consensus 71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLY 150 (604)
T KOG0592|consen 71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLY 150 (604)
T ss_pred ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceE
Confidence 34679999999999999999999999999999999998887777777888999999999988999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
+|+||+++|+|.++|.+.+.|++..++.++.+|+.||.|||++|||||||||+|||+ +.+++++|+|||.|+.+.+.
T Consensus 151 FvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILL---d~dmhikITDFGsAK~l~~~ 227 (604)
T KOG0592|consen 151 FVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILL---DKDGHIKITDFGSAKILSPS 227 (604)
T ss_pred EEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeE---cCCCcEEEeeccccccCChh
Confidence 999999999999999999999999999999999999999999999999999999999 67889999999999987532
Q ss_pred Cc--------------ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC
Q 010013 225 DV--------------FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289 (520)
Q Consensus 225 ~~--------------~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~ 289 (520)
.. ...++||-.|.+||++.. ..++.+|||+|||+||+|+.|.+||.+.++..++++|+...+.|+
T Consensus 228 ~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp 307 (604)
T KOG0592|consen 228 QKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFP 307 (604)
T ss_pred hccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCC
Confidence 11 144799999999999975 578999999999999999999999999999999999999988887
Q ss_pred CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 290 SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 290 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
. ++++.+++||.++|..||++|+|+.||.+||||...
T Consensus 308 ~----~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~V 344 (604)
T KOG0592|consen 308 E----GFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGV 344 (604)
T ss_pred C----CCCHHHHHHHHHHHccCccccccHHHHhhCcccccC
Confidence 5 678999999999999999999999999999999854
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-54 Score=400.84 Aligned_cols=264 Identities=36% Similarity=0.677 Sum_probs=240.1
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
..++|.+.++||+|+||+||+|+++.++..||||.+.+..+ ++...+.+..|+.+|+.++ |||||.+++++..++++|
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l-~~k~~e~L~~Ei~iLkel~-H~nIV~l~d~~~~~~~i~ 85 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL-NKKLVELLLSEIKILKELK-HPNIVRLLDCIEDDDFIY 85 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc-CHHHHHHHHHHHHHHHhcC-CcceeeEEEEEecCCeEE
Confidence 34679999999999999999999999999999999987654 5667788999999999999 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCC---CCeeEeeccccccc
Q 010013 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAED---SPLKATDFGLSVFF 221 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~---~~~kl~Dfg~a~~~ 221 (520)
+|||||.||+|.+++.+.+.+++..+..++.||+.||++||+++||||||||+|||++....+ ..+||+|||+|+.+
T Consensus 86 lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L 165 (429)
T KOG0595|consen 86 LVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL 165 (429)
T ss_pred EEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence 999999999999999999999999999999999999999999999999999999999875333 67999999999999
Q ss_pred CCCCcccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHH
Q 010013 222 KPGDVFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300 (520)
Q Consensus 222 ~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (520)
.++....+.+|+|.|||||++. ++|+.|+|+||+|+++|++++|+.||...+..+++..+.++....+..+ ..++..+
T Consensus 166 ~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~-~~~s~~~ 244 (429)
T KOG0595|consen 166 QPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLP-AELSNPL 244 (429)
T ss_pred CchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchh-hhccCch
Confidence 9888888999999999999985 6799999999999999999999999999999999888877765544332 3456677
Q ss_pred HHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 301 ~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
.+++...|+.+|.+|.+..+-+.|++.....
T Consensus 245 ~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p 275 (429)
T KOG0595|consen 245 RELLISLLQRNPKDRISFEDFFDHPFLAANP 275 (429)
T ss_pred hhhhhHHHhcCccccCchHHhhhhhhcccCc
Confidence 7999999999999999999999999997654
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-54 Score=394.40 Aligned_cols=258 Identities=34% Similarity=0.667 Sum_probs=237.4
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.++|.+.+.||+|+||+||.++.++|++.||+|++.+.........+...+|..+|.++. ||.||+++-.|++.+.+|+
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~-hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIK-HPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCC-CCcEeeeEEecccCCeEEE
Confidence 367999999999999999999999999999999999888777777888999999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc-CCC
Q 010013 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF-KPG 224 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~-~~~ 224 (520)
|+||+.||.|..+|.+.+.+++..+.-++..|+.||.|||++|||||||||+|||+ +.+++++|+|||+++.. ..+
T Consensus 103 Vld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILL---d~~GHi~LtDFgL~k~~~~~~ 179 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILL---DEQGHIKLTDFGLCKEDLKDG 179 (357)
T ss_pred EEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeee---cCCCcEEEeccccchhcccCC
Confidence 99999999999999999999999999999999999999999999999999999999 67899999999999954 344
Q ss_pred CcccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHH
Q 010013 225 DVFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (520)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (520)
....+++||+.|||||++. ..|+..+|.||||+++|+|++|.+||.+.+.....+.|..+....+. ..++.+++++
T Consensus 180 ~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p---~~ls~~ardl 256 (357)
T KOG0598|consen 180 DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPP---GYLSEEARDL 256 (357)
T ss_pred CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCC---ccCCHHHHHH
Confidence 5556789999999999886 56999999999999999999999999999999999999988744433 2478999999
Q ss_pred HHHhcccCCCCCC----CHHHHHcCCccccC
Q 010013 304 VKKMLHADPKERL----SAAEVLNHPWMRVD 330 (520)
Q Consensus 304 i~~~l~~dp~~Rp----s~~~~l~~~~~~~~ 330 (520)
++++|+.||++|. .+.++-+||||...
T Consensus 257 l~~LL~rdp~~RLg~~~d~~~ik~HpfF~~i 287 (357)
T KOG0598|consen 257 LKKLLKRDPRQRLGGPGDAEEIKRHPFFKGI 287 (357)
T ss_pred HHHHhccCHHHhcCCCCChHHhhcCcccccC
Confidence 9999999999996 78999999999853
|
|
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-54 Score=378.75 Aligned_cols=263 Identities=36% Similarity=0.676 Sum_probs=241.7
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccC-----CcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI-----NRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~ 139 (520)
+-..|.-.+.||.|..++|.++.++.+|+.+|+|++....-. .....+.-++|+.||+++.+||+|+++.++|+.
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes 94 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES 94 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence 445677778999999999999999999999999998632211 112245678899999999999999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccc
Q 010013 140 RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (520)
Q Consensus 140 ~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~ 219 (520)
+..+++|+|.|+.|.|.++|...-.+++....+|++|++.|+.|||.++||||||||+|||+ +++-++||+|||++.
T Consensus 95 ~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILl---ddn~~i~isDFGFa~ 171 (411)
T KOG0599|consen 95 DAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILL---DDNMNIKISDFGFAC 171 (411)
T ss_pred cchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheee---ccccceEEeccceee
Confidence 99999999999999999999998899999999999999999999999999999999999999 567789999999999
Q ss_pred ccCCCCcccccccCCCccCchhhcc-------cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCC
Q 010013 220 FFKPGDVFKDLVGSAYYVAPEVLRR-------NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292 (520)
Q Consensus 220 ~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 292 (520)
.+.+++.....+|||+|+|||.+.. .|+..+|+||+||++|.|+.|.+|||.....-++..|+.+.+.|..+.
T Consensus 172 ~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~spe 251 (411)
T KOG0599|consen 172 QLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPE 251 (411)
T ss_pred ccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcc
Confidence 9999999999999999999998752 478899999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 293 ~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
|.+++...++||.+||+.||.+|.|++|+|.||||...
T Consensus 252 Wadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~ 289 (411)
T KOG0599|consen 252 WADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQI 289 (411)
T ss_pred hhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHHH
Confidence 99999999999999999999999999999999999643
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-52 Score=407.33 Aligned_cols=260 Identities=35% Similarity=0.671 Sum_probs=242.2
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.+-|++++-||.|+.|.|-+|+|..||+.+|||++.+...........+.+|+-+|+-+. |||++++|+++++..++|+
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~-HpnVl~LydVwe~~~~lyl 89 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIE-HPNVLRLYDVWENKQHLYL 89 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhc-CCCeeeeeeeeccCceEEE
Confidence 355999999999999999999999999999999998775555556678999999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
|.||++||.|++++.+++++++.+++++++||+.|+.|+|..+|+||||||+|+|+ +..++|||+|||+|..-.++.
T Consensus 90 vlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLL---d~~~nIKIADFGMAsLe~~gk 166 (786)
T KOG0588|consen 90 VLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLL---DVKNNIKIADFGMASLEVPGK 166 (786)
T ss_pred EEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhh---hcccCEeeeccceeecccCCc
Confidence 99999999999999999999999999999999999999999999999999999999 455669999999999888888
Q ss_pred cccccccCCCccCchhhccc--CCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHH
Q 010013 226 VFKDLVGSAYYVAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (520)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~~--~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (520)
.+.+.||+|.|.|||++.|. -+.++||||+|||||.||+|+.||.+.+...++.++.+|.+..+. .+++++++|
T Consensus 167 lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MPs----~Is~eaQdL 242 (786)
T KOG0588|consen 167 LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMPS----NISSEAQDL 242 (786)
T ss_pred cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCCC----cCCHHHHHH
Confidence 88999999999999998764 478999999999999999999999999999999999999988774 789999999
Q ss_pred HHHhcccCCCCCCCHHHHHcCCccccCCCC
Q 010013 304 VKKMLHADPKERLSAAEVLNHPWMRVDGDA 333 (520)
Q Consensus 304 i~~~l~~dp~~Rps~~~~l~~~~~~~~~~~ 333 (520)
|.+||.+||++|+|.++|++|||++.....
T Consensus 243 Lr~ml~VDp~~RiT~~eI~kHP~l~g~~~~ 272 (786)
T KOG0588|consen 243 LRRMLDVDPSTRITTEEILKHPFLSGYTSL 272 (786)
T ss_pred HHHHhccCccccccHHHHhhCchhhcCCCC
Confidence 999999999999999999999999876554
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-51 Score=402.18 Aligned_cols=259 Identities=39% Similarity=0.726 Sum_probs=234.5
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCc--ccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR--DDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~--~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~ 141 (520)
...+.|.+++.||+|+||+|+.|.+..++..||+|++.+...... ...+.+.+|+.+++++..||||+++++++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 345789999999999999999999999999999997766422211 234667899999999998999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCC-CCeeEeecccccc
Q 010013 142 SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAED-SPLKATDFGLSVF 220 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~-~~~kl~Dfg~a~~ 220 (520)
.+|+|||||.||+|.+++.+.+++.+..+..+++||+.|+.|||++||+||||||+|||++ .+ +++||+|||++..
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld---~~~~~~Kl~DFG~s~~ 170 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLD---GNEGNLKLSDFGLSAI 170 (370)
T ss_pred eEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEec---CCCCCEEEeccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999995 34 7899999999998
Q ss_pred c-CCCCcccccccCCCccCchhhccc--C-CCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCC
Q 010013 221 F-KPGDVFKDLVGSAYYVAPEVLRRN--Y-GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (520)
Q Consensus 221 ~-~~~~~~~~~~gt~~y~aPE~~~~~--~-~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (520)
. .........+||+.|+|||++.+. | +.++||||+||+||.|++|..||.......++..+..+.+.++. .+
T Consensus 171 ~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~----~~ 246 (370)
T KOG0583|consen 171 SPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPS----YL 246 (370)
T ss_pred cCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCC----Cc
Confidence 8 466677889999999999999753 4 58999999999999999999999999988899999988887765 34
Q ss_pred -CHHHHHHHHHhcccCCCCCCCHHHHHcCCcccc
Q 010013 297 -SSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 297 -~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
+++++.|+.+||.+||.+|+|+.++++||||+.
T Consensus 247 ~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 247 LSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred CCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 999999999999999999999999999999997
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-52 Score=367.75 Aligned_cols=255 Identities=33% Similarity=0.653 Sum_probs=238.8
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
..++|.+.+.||.|+||.|-+++++.+|..+|+|++.+.......+.+...+|..+|+.+. ||+++++++.+.+..++|
T Consensus 42 ~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~-~PFlv~l~~t~~d~~~ly 120 (355)
T KOG0616|consen 42 SLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVS-HPFLVKLYGTFKDNSNLY 120 (355)
T ss_pred chhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhcc-CceeEEEEEeeccCCeEE
Confidence 3467999999999999999999999999999999999888877778888999999999999 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
+||||++||.|.+++.+.++++++.++-++.||+.||+|||+++|++|||||+|||+ +.++.+||+|||+|+.+...
T Consensus 121 mvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLl---D~~G~iKitDFGFAK~v~~r 197 (355)
T KOG0616|consen 121 MVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLL---DQNGHIKITDFGFAKRVSGR 197 (355)
T ss_pred EEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeee---ccCCcEEEEeccceEEecCc
Confidence 999999999999999999999999999999999999999999999999999999999 67889999999999987644
Q ss_pred CcccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHH
Q 010013 225 DVFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (520)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (520)
..+.+|||.|+|||++. ..++.++|.|||||++|||+.|.+||...+...++++|..+...++. .+++.+++|
T Consensus 198 --T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~----~fs~~~kdL 271 (355)
T KOG0616|consen 198 --TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPS----YFSSDAKDL 271 (355)
T ss_pred --EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCc----ccCHHHHHH
Confidence 46789999999999886 56999999999999999999999999999999999999999998875 678999999
Q ss_pred HHHhcccCCCCCC-----CHHHHHcCCcccc
Q 010013 304 VKKMLHADPKERL-----SAAEVLNHPWMRV 329 (520)
Q Consensus 304 i~~~l~~dp~~Rp-----s~~~~l~~~~~~~ 329 (520)
|.++|+.|-.+|. ...++.+||||+.
T Consensus 272 l~~LL~vD~t~R~gnlknG~~dIk~H~wF~~ 302 (355)
T KOG0616|consen 272 LKKLLQVDLTKRFGNLKNGVEDIKNHPWFKG 302 (355)
T ss_pred HHHHHhhhhHhhhcCcCCCccccccCccccc
Confidence 9999999999994 6789999999984
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-52 Score=372.62 Aligned_cols=257 Identities=28% Similarity=0.546 Sum_probs=221.5
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
+.|....++|+|+||.||+|++++||+.||||++..+. .++...+-..+|+++|++|. |||+|.++++|.....+++|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Ese-dd~~VkKIAlREIrmLKqLk-H~NLVnLiEVFrrkrklhLV 79 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESE-DDPVVKKIALREIRMLKQLK-HENLVNLIEVFRRKRKLHLV 79 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCC-ccHHHHHHHHHHHHHHHhcc-cchHHHHHHHHHhcceeEEE
Confidence 45888899999999999999999999999999986433 23444566789999999999 99999999999999999999
Q ss_pred EeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC-CC
Q 010013 147 MDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PG 224 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~-~~ 224 (520)
+|||+. ++.+.|.+. ..++...+..++.|++.|+.|+|+++++||||||+|||++ .++.+||||||+|+.+. ++
T Consensus 80 FE~~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit---~~gvvKLCDFGFAR~L~~pg 155 (396)
T KOG0593|consen 80 FEYCDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILIT---QNGVVKLCDFGFARTLSAPG 155 (396)
T ss_pred eeecch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEe---cCCcEEeccchhhHhhcCCc
Confidence 999966 555666554 4699999999999999999999999999999999999994 67889999999999987 77
Q ss_pred CcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC----------------
Q 010013 225 DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI---------------- 286 (520)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~---------------- 286 (520)
+.++..+.|.+|.|||.+.+ +|+..+||||+||++.||++|.+.|.+.++-+.+..|...-.
T Consensus 156 d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F 235 (396)
T KOG0593|consen 156 DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFF 235 (396)
T ss_pred chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCce
Confidence 88899999999999999876 599999999999999999999999999998776655532111
Q ss_pred ---CCCC--------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcccc
Q 010013 287 ---DFSS--------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 287 ---~~~~--------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
.++. ..++.++.-+.+|+..||+.||++|+|.+|+|.|+||..
T Consensus 236 ~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~ 289 (396)
T KOG0593|consen 236 HGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDG 289 (396)
T ss_pred eeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHH
Confidence 1111 123567788999999999999999999999999999953
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-51 Score=391.73 Aligned_cols=261 Identities=32% Similarity=0.565 Sum_probs=235.5
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
..++|.+++.||+||||.||+|+-+.||..+|+|++.+.......+++-++.|-.+|.... +|.||+||-.|++..++|
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~d-s~~vVKLyYsFQD~~~LY 217 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVD-SPWVVKLYYSFQDKEYLY 217 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcC-CCcEEEEEEEecCCCeeE
Confidence 4578999999999999999999999999999999999998888888999999999999965 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC-
Q 010013 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP- 223 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~- 223 (520)
|||||++||++..+|.+.+.|++..+..++.+++.|+..||+.|+|||||||+|+|+ +..+++||+|||++..+..
T Consensus 218 LiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLi---D~~GHiKLSDFGLs~gl~~~ 294 (550)
T KOG0605|consen 218 LIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLI---DAKGHIKLSDFGLSTGLDKK 294 (550)
T ss_pred EEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheee---cCCCCEeeccccccchhhhh
Confidence 999999999999999999999999999999999999999999999999999999999 6789999999999854210
Q ss_pred ---------------------CC-c-------------------------ccccccCCCccCchhhcc-cCCCcchhHHH
Q 010013 224 ---------------------GD-V-------------------------FKDLVGSAYYVAPEVLRR-NYGAEADIWSA 255 (520)
Q Consensus 224 ---------------------~~-~-------------------------~~~~~gt~~y~aPE~~~~-~~~~~~Dv~sl 255 (520)
.+ . ....+|||.|+|||++.+ .|+..+|.|||
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSL 374 (550)
T KOG0605|consen 295 HRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSL 374 (550)
T ss_pred hhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHH
Confidence 00 0 011479999999999864 59999999999
Q ss_pred HHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC---CHHHHHcCCccccC
Q 010013 256 GVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERL---SAAEVLNHPWMRVD 330 (520)
Q Consensus 256 G~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp---s~~~~l~~~~~~~~ 330 (520)
|||+||||.|.+||.+.+..+...+|.+....+..+.-..++.++++||.+||. ||++|. +++||.+||||+..
T Consensus 375 G~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v 451 (550)
T KOG0605|consen 375 GCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGV 451 (550)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccC
Confidence 999999999999999999999999999887555544445788999999999999 999998 59999999999864
|
|
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-51 Score=362.93 Aligned_cols=271 Identities=37% Similarity=0.696 Sum_probs=242.1
Q ss_pred ccccccceeec-ceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe-
Q 010013 62 MEDVRNTYIFG-RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED- 139 (520)
Q Consensus 62 ~~~~~~~y~~~-~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~- 139 (520)
...+.++|.+. +.||-|-.|.|-.+.++.|++.+|+|++.. ....++|+++-....+|||||.++++|+.
T Consensus 56 ~~~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D--------s~KARrEVeLHw~~s~h~~iV~IidVyeNs 127 (400)
T KOG0604|consen 56 EYSITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD--------SPKARREVELHWMASGHPHIVSIIDVYENS 127 (400)
T ss_pred cccchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc--------CHHHHhHhhhhhhhcCCCceEEeehhhhhh
Confidence 34567889885 568999999999999999999999999843 25677888887777889999999998864
Q ss_pred ---CCeEEEEEeccCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEee
Q 010013 140 ---RHSVNLIMDLCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATD 214 (520)
Q Consensus 140 ---~~~~~lv~e~~~g~~L~~~l~~~~~--l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~D 214 (520)
...+-+|||.++||.|++++...+. +++.++..|++||..|+.|||+.+|.||||||+|+|......+..+||+|
T Consensus 128 ~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtD 207 (400)
T KOG0604|consen 128 YQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTD 207 (400)
T ss_pred ccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecc
Confidence 4678899999999999999988765 99999999999999999999999999999999999999988899999999
Q ss_pred cccccccCCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCC----HHHHHHHHHcCCCCCC
Q 010013 215 FGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGET----EQSIFDAILRGHIDFS 289 (520)
Q Consensus 215 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~----~~~~~~~~~~~~~~~~ 289 (520)
||+|+.-.......+.+-||.|.|||+++. .|+..+|+||+||++|.|++|.+||.... ......+|..+.+.|+
T Consensus 208 fGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP 287 (400)
T KOG0604|consen 208 FGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFP 287 (400)
T ss_pred cccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCC
Confidence 999998766666677788999999999984 59999999999999999999999997754 3567788999999999
Q ss_pred CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCCCCCCcccH
Q 010013 290 SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDI 340 (520)
Q Consensus 290 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~~~~~~~~~ 340 (520)
.+.|..+|+..+++|+.+|+.+|.+|.|+++++.|||+.......+.++..
T Consensus 288 ~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~vp~tpl~t 338 (400)
T KOG0604|consen 288 EPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEAVPQTPLST 338 (400)
T ss_pred ChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccccCCCCCchh
Confidence 999999999999999999999999999999999999999887777666543
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-50 Score=394.62 Aligned_cols=258 Identities=30% Similarity=0.555 Sum_probs=237.8
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
..++|.+.+.||+|+||+|+++..+.+++.||||++++......+.++.+..|-+|+....+||.++.++..|+...++|
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 34679999999999999999999999999999999999998888999999999999999989999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC-C
Q 010013 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-P 223 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~-~ 223 (520)
+||||+.||++ .++...+.+++..+.-++..++.||.|||++||||||||.+|||+ +..+++||+|||+++..- .
T Consensus 446 fvmey~~Ggdm-~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLL---D~eGh~kiADFGlcKe~m~~ 521 (694)
T KOG0694|consen 446 FVMEYVAGGDL-MHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLL---DTEGHVKIADFGLCKEGMGQ 521 (694)
T ss_pred EEEEecCCCcE-EEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEE---cccCcEEecccccccccCCC
Confidence 99999999994 344455789999999999999999999999999999999999999 678899999999999754 4
Q ss_pred CCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHH
Q 010013 224 GDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (520)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (520)
+....+++|||.|+|||++.+ .|+..+|.|||||+||+|+.|+.||.+.++.++.+.|......++. .++.+...
T Consensus 522 g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~----~ls~ea~~ 597 (694)
T KOG0694|consen 522 GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPR----FLSKEAIA 597 (694)
T ss_pred CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCC----cccHHHHH
Confidence 556678999999999999976 5999999999999999999999999999999999999998877765 67999999
Q ss_pred HHHHhcccCCCCCCC-----HHHHHcCCccccC
Q 010013 303 IVKKMLHADPKERLS-----AAEVLNHPWMRVD 330 (520)
Q Consensus 303 li~~~l~~dp~~Rps-----~~~~l~~~~~~~~ 330 (520)
+++++|..+|++|.. +.+|..||||+..
T Consensus 598 il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i 630 (694)
T KOG0694|consen 598 IMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSI 630 (694)
T ss_pred HHHHHhccCcccccCCCCCCchhhhhCCccccC
Confidence 999999999999994 5889999999853
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-51 Score=387.50 Aligned_cols=264 Identities=30% Similarity=0.507 Sum_probs=227.1
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC-e
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH-S 142 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~-~ 142 (520)
.+-++|.+.++||.|+||.||+|+.+.+|..||||.++++ +...++.-. .||++.|++|+.|||||+|.+++.+.+ .
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~K-f~s~ee~~n-LREvksL~kln~hpniikL~Evi~d~~~~ 84 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKK-FYSWEECMN-LREVKSLRKLNPHPNIIKLKEVIRDNDRI 84 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhh-hccHHHHHH-HHHHHHHHhcCCCCcchhhHHHhhccCce
Confidence 3457899999999999999999999999999999998754 333332222 589999999999999999999998887 9
Q ss_pred EEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 143 VNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
+|+||||| ..+|+++++.. +.+++..+..|+.||++||+|+|.+|+.|||+||+|||+. ....+||+|||+|+.+
T Consensus 85 L~fVfE~M-d~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~---~~~~iKiaDFGLARev 160 (538)
T KOG0661|consen 85 LYFVFEFM-DCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILIS---GNDVIKIADFGLAREV 160 (538)
T ss_pred EeeeHHhh-hhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEec---ccceeEeccccccccc
Confidence 99999999 56999998765 4599999999999999999999999999999999999995 3667999999999999
Q ss_pred CCCCcccccccCCCccCchhhc--ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCC--------------
Q 010013 222 KPGDVFKDLVGSAYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH-------------- 285 (520)
Q Consensus 222 ~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~-------------- 285 (520)
.....++..+.|.+|+|||++- +.|+.+.||||+||+++|+++-++.|.|.++.+.+.+|..-.
T Consensus 161 ~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~L 240 (538)
T KOG0661|consen 161 RSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNL 240 (538)
T ss_pred ccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHH
Confidence 8888899999999999999874 569999999999999999999999999999877666663211
Q ss_pred -----CCCCCC-------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCCC
Q 010013 286 -----IDFSSD-------PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDA 333 (520)
Q Consensus 286 -----~~~~~~-------~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~~ 333 (520)
+.++.. .+++.++++.++|.+||..||++||||.|+|+||||+.....
T Consensus 241 a~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~~~ 300 (538)
T KOG0661|consen 241 ASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGRAS 300 (538)
T ss_pred HHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccccccccc
Confidence 111111 134678999999999999999999999999999999876543
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-50 Score=387.48 Aligned_cols=255 Identities=31% Similarity=0.568 Sum_probs=234.0
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+.+.||+|+||.||+|+.+.+.+.||+|.+.+... +...++.+++|++|++.|+ |||||.++++|+...++++|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr-~~k~l~~l~~ev~i~r~lk-Hpniv~m~esfEt~~~~~vV 79 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGR-NEKELKNLRQEVRILRSLK-HPNIVEMLESFETSAHLWVV 79 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCC-chHHHHHHHHHHHHHHhcC-CcchhhHHHhhcccceEEEE
Confidence 469999999999999999999999999999999987553 4456788999999999999 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC-
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~- 225 (520)
+|||.| +|..++...+.++++.+..++.+++.||.|||+++|+|||+||.|||+ +..+.+|+||||+|+....+.
T Consensus 80 te~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl---~~~~~~KlcdFg~Ar~m~~~t~ 155 (808)
T KOG0597|consen 80 TEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILL---EKGGTLKLCDFGLARAMSTNTS 155 (808)
T ss_pred ehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeee---cCCCceeechhhhhhhcccCce
Confidence 999977 999999999999999999999999999999999999999999999999 678899999999999886654
Q ss_pred cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Q 010013 226 VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (520)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (520)
..+...|||.|||||...+ .|+..+|+||+||++||+++|++||...+...+...|......++. ..+..+..|+
T Consensus 156 vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~----~~S~~f~nfl 231 (808)
T KOG0597|consen 156 VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPS----TASSSFVNFL 231 (808)
T ss_pred eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcc----cccHHHHHHH
Confidence 3456789999999999875 5999999999999999999999999999988899988887666554 7799999999
Q ss_pred HHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 305 KKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 305 ~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
..+|.+||.+|.|..+++.|||.+...
T Consensus 232 ~gLL~kdP~~RltW~~Ll~HpF~k~~~ 258 (808)
T KOG0597|consen 232 QGLLIKDPAQRLTWTDLLGHPFWKGKI 258 (808)
T ss_pred HHHhhcChhhcccHHHHhcChHHhhhh
Confidence 999999999999999999999997643
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-51 Score=358.97 Aligned_cols=246 Identities=28% Similarity=0.526 Sum_probs=215.5
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEE-EEEeC-CeE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKG-AYEDR-HSV 143 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~-~~~~~-~~~ 143 (520)
...|.+.++||.|+||.||++.+..+|..+|.|.+.... .+....+.+..|+.+|++|+ |||||++++ .+..+ ..+
T Consensus 18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~-md~k~rq~~v~Ei~lLkQL~-HpNIVqYy~~~f~~~~evl 95 (375)
T KOG0591|consen 18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGM-MDAKARQDCVKEISLLKQLN-HPNIVQYYAHSFIEDNEVL 95 (375)
T ss_pred HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhh-ccHHHHHHHHHHHHHHHhcC-CchHHHHHHHhhhccchhh
Confidence 456999999999999999999999999999999998443 45566788999999999999 999999998 44444 449
Q ss_pred EEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH--cC--CeeecCCCCcEEeecCCCCCCeeEeec
Q 010013 144 NLIMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHS--MG--VMHRDLKPENFLFSSSAEDSPLKATDF 215 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~----~~~l~~~~~~~i~~qi~~~l~~LH~--~~--ivH~Dlkp~NIll~~~~~~~~~kl~Df 215 (520)
+||||||.+|+|...++. ++.+++..+++++.|++.||.++|+ .+ |+||||||.||++ +.++.+||+||
T Consensus 96 nivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl---~~~gvvKLGDf 172 (375)
T KOG0591|consen 96 NIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFL---TANGVVKLGDF 172 (375)
T ss_pred HHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEE---cCCCceeeccc
Confidence 999999999999987754 4569999999999999999999998 45 9999999999999 56788999999
Q ss_pred ccccccCCCCc-ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCC
Q 010013 216 GLSVFFKPGDV-FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPW 293 (520)
Q Consensus 216 g~a~~~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 293 (520)
|+++.+..... ....+|||.||+||.+.+ .|+.++||||+||++|||+.-++||.+.+-.++-.+|.++.++..+ -
T Consensus 173 GL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p--~ 250 (375)
T KOG0591|consen 173 GLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLP--D 250 (375)
T ss_pred hhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCCc--H
Confidence 99999865543 346799999999999875 5999999999999999999999999999999999999998665322 1
Q ss_pred CCCCHHHHHHHHHhcccCCCCCCCH
Q 010013 294 PNISSSAKDIVKKMLHADPKERLSA 318 (520)
Q Consensus 294 ~~~~~~~~~li~~~l~~dp~~Rps~ 318 (520)
.-+|.++..+|..|+.+||+.||+.
T Consensus 251 ~~YS~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 251 EHYSTDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred HHhhhHHHHHHHHHccCCcccCCCc
Confidence 3578899999999999999999987
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-49 Score=370.68 Aligned_cols=263 Identities=34% Similarity=0.634 Sum_probs=227.5
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCc-----------ccHHHHHHHHHHHHhccCCCCeeE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR-----------DDVEDVRREVQIMHHLTGHRNIVE 132 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~-----------~~~~~~~~e~~~l~~l~~hp~iv~ 132 (520)
...+.|.+++.||+|.||.|-+|++..+++.||||++.+..+... ..++.+++|+.+|++|. |||||+
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~-H~nVV~ 172 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLH-HPNVVK 172 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcC-CcCeeE
Confidence 345789999999999999999999999999999999986554221 12478999999999999 999999
Q ss_pred EEEEEEeC--CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCe
Q 010013 133 LKGAYEDR--HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPL 210 (520)
Q Consensus 133 l~~~~~~~--~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~ 210 (520)
|+++..+. +.+|||+|||..|.+...--....+++.+++++++.++.||.|||.+|||||||||+|+|+ +.++++
T Consensus 173 LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl---~~~g~V 249 (576)
T KOG0585|consen 173 LIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLL---SSDGTV 249 (576)
T ss_pred EEEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEE---cCCCcE
Confidence 99999874 6799999999999885533222238999999999999999999999999999999999999 457899
Q ss_pred eEeecccccccCCC------CcccccccCCCccCchhhcc---c--CCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHH
Q 010013 211 KATDFGLSVFFKPG------DVFKDLVGSAYYVAPEVLRR---N--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFD 279 (520)
Q Consensus 211 kl~Dfg~a~~~~~~------~~~~~~~gt~~y~aPE~~~~---~--~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~ 279 (520)
||+|||.+.....+ ..+...+|||.|+|||.+.+ . .+.+.||||+||+||-|+.|+.||.+....++++
T Consensus 250 KIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~ 329 (576)
T KOG0585|consen 250 KISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFD 329 (576)
T ss_pred EeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHH
Confidence 99999999876322 23445789999999998754 1 4678999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 280 AILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
+|.+....++.. +.+.+.+++||.+||.+||++|.++.++..|||.....+
T Consensus 330 KIvn~pL~fP~~--pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g~ 380 (576)
T KOG0585|consen 330 KIVNDPLEFPEN--PEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDGD 380 (576)
T ss_pred HHhcCcccCCCc--ccccHHHHHHHHHHhhcChhheeehhhheecceeccCCC
Confidence 999988887765 367899999999999999999999999999999987644
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-48 Score=365.56 Aligned_cols=261 Identities=30% Similarity=0.459 Sum_probs=228.3
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.+.|.+...||.|..++||+|+...++..||||++..+...+ ..+.+++|++.|+.+. ||||++++..|..+..+|+
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~--~ld~l~kE~~~msl~~-HPNIv~~~~sFvv~~~LWv 101 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNN--DLDALRKEVQTMSLID-HPNIVTYHCSFVVDSELWV 101 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhh--hHHHHHHHHHHhhhcC-CCCcceEEEEEEecceeEE
Confidence 467999999999999999999999999999999997665433 3789999999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 146 IMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
||.||.+|++.+.+... ..+++..+..|++++++||.|||.+|.||||||+.|||+ +.++.|||+|||.+..+..
T Consensus 102 VmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi---~~dG~VkLadFgvsa~l~~ 178 (516)
T KOG0582|consen 102 VMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILI---DSDGTVKLADFGVSASLFD 178 (516)
T ss_pred eehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEE---cCCCcEEEcCceeeeeecc
Confidence 99999999999999764 349999999999999999999999999999999999999 5688899999998776543
Q ss_pred CC-----cccccccCCCccCchhhc---ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC------
Q 010013 224 GD-----VFKDLVGSAYYVAPEVLR---RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS------ 289 (520)
Q Consensus 224 ~~-----~~~~~~gt~~y~aPE~~~---~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~------ 289 (520)
.. .+..++||++|||||++. ..|+.|+||||||++..||.+|..||....+.+.+-.-.++.++.+
T Consensus 179 ~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~ 258 (516)
T KOG0582|consen 179 SGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLD 258 (516)
T ss_pred cCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCC
Confidence 22 125568999999999964 3599999999999999999999999999888887777666666422
Q ss_pred CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 290 SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 290 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
......++..++.+|..||..||.+|||+.++|+|+||+....
T Consensus 259 ~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~ 301 (516)
T KOG0582|consen 259 KDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAKS 301 (516)
T ss_pred hHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhccc
Confidence 2223456788999999999999999999999999999986543
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-49 Score=372.02 Aligned_cols=258 Identities=34% Similarity=0.569 Sum_probs=214.7
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC--eEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH--SVN 144 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~--~~~ 144 (520)
..|..++.||+|+||.||++.++++|..+|||.+.... ....+.+.+|+.+|++++ |||||+++|...... .++
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~---~~~~~~l~~Ei~iL~~l~-~p~IV~~~G~~~~~~~~~~~ 92 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELED---SPTSESLEREIRILSRLN-HPNIVQYYGSSSSRENDEYN 92 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeeccc---chhHHHHHHHHHHHHhCC-CCCEEeeCCccccccCeeeE
Confidence 45888899999999999999999999999999986542 122678999999999999 999999999755444 699
Q ss_pred EEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 145 LIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
++|||++||+|.+.+.+.+ .++++.+..+++||++||.|||++|||||||||+|||++.. ++.+||+|||.+.....
T Consensus 93 i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~--~~~~KlaDFG~a~~~~~ 170 (313)
T KOG0198|consen 93 IFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPS--NGDVKLADFGLAKKLES 170 (313)
T ss_pred eeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCC--CCeEEeccCcccccccc
Confidence 9999999999999999877 79999999999999999999999999999999999999531 57899999999987653
Q ss_pred ----CCcccccccCCCccCchhhccc--CCCcchhHHHHHHHHHHhhCCCCCCC-CCHHHHHHHHHcCCCCCCCCCCCCC
Q 010013 224 ----GDVFKDLVGSAYYVAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWG-ETEQSIFDAILRGHIDFSSDPWPNI 296 (520)
Q Consensus 224 ----~~~~~~~~gt~~y~aPE~~~~~--~~~~~Dv~slG~~l~~ll~g~~pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (520)
........||+.|||||++... ..+++|||||||++.||+||+.||.. .......-.+.... ..+ .....+
T Consensus 171 ~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~-~~P-~ip~~l 248 (313)
T KOG0198|consen 171 KGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGRED-SLP-EIPDSL 248 (313)
T ss_pred ccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccC-CCC-CCCccc
Confidence 1223457899999999998743 33499999999999999999999987 33333333333333 112 223468
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 297 SSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 297 ~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
|.++++||.+|+..+|++||||.++|+|||.+....
T Consensus 249 s~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~ 284 (313)
T KOG0198|consen 249 SDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI 284 (313)
T ss_pred CHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence 999999999999999999999999999999976543
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-49 Score=383.63 Aligned_cols=257 Identities=30% Similarity=0.541 Sum_probs=223.6
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
....|....+||+|+.|.||.|....+++.||||.+.... ....+-+.+|+.+|+.+. |+|||.+++.|...+.+|
T Consensus 271 P~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~---Q~~keLilnEi~Vm~~~~-H~NiVnfl~Sylv~deLW 346 (550)
T KOG0578|consen 271 PRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRK---QPKKELLLNEILVMRDLH-HPNIVNFLDSYLVGDELW 346 (550)
T ss_pred hhhhhcchhhhccccccceeeeeeccCCceEEEEEEEecc---CCchhhhHHHHHHHHhcc-chHHHHHHHHhcccceeE
Confidence 3456788889999999999999999999999999996543 233467899999999998 999999999998889999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
+||||++||+|.+.+.. ..+++.+++.|++.+++||+|||.+||+|||||.+|||++ .++.+||+|||++..+...
T Consensus 347 VVMEym~ggsLTDvVt~-~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~---~~g~vKltDFGFcaqi~~~ 422 (550)
T KOG0578|consen 347 VVMEYMEGGSLTDVVTK-TRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLT---MDGSVKLTDFGFCAQISEE 422 (550)
T ss_pred EEEeecCCCchhhhhhc-ccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEec---cCCcEEEeeeeeeeccccc
Confidence 99999999999887755 4599999999999999999999999999999999999995 5667999999999988655
Q ss_pred C-cccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHH
Q 010013 225 D-VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (520)
Q Consensus 225 ~-~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (520)
. .....+|||+|||||+.. ..|++++||||||++++||+-|++||........+..|.....+ ....+..+|+.+++
T Consensus 423 ~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P-~lk~~~klS~~~kd 501 (550)
T KOG0578|consen 423 QSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTP-KLKNPEKLSPELKD 501 (550)
T ss_pred cCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCC-CcCCccccCHHHHH
Confidence 4 456789999999999986 46999999999999999999999999987766655555544332 22334689999999
Q ss_pred HHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 303 IVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 303 li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
|+.+||..|+++|+++.++|+||||+..
T Consensus 502 FL~~cL~~dv~~RasA~eLL~HpFl~~a 529 (550)
T KOG0578|consen 502 FLDRCLVVDVEQRASAKELLEHPFLKMA 529 (550)
T ss_pred HHHHHhhcchhcCCCHHHHhcChhhhhc
Confidence 9999999999999999999999999643
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-49 Score=365.14 Aligned_cols=258 Identities=33% Similarity=0.655 Sum_probs=242.2
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~ 142 (520)
.+...+|.+.+.||+|.||.|-+|.....|+.||||.|.+....+...+-.+++|++||+.|+ ||||+.+|++|+..+.
T Consensus 49 hnlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLN-HPhII~IyEVFENkdK 127 (668)
T KOG0611|consen 49 HNLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLN-HPHIIQIYEVFENKDK 127 (668)
T ss_pred cchhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcC-CCceeehhhhhcCCce
Confidence 456678999999999999999999998899999999999988888888888999999999999 9999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
+.|||||..+|.|++++.+.+.|++.++..+++||+.|+.|+|.++++|||||.+|||+ +.++++||+|||++..+.
T Consensus 128 IvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILL---D~N~NiKIADFGLSNly~ 204 (668)
T KOG0611|consen 128 IVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILL---DQNNNIKIADFGLSNLYA 204 (668)
T ss_pred EEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheee---cCCCCeeeeccchhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999 678889999999999998
Q ss_pred CCCcccccccCCCccCchhhccc--CCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHH
Q 010013 223 PGDVFKDLVGSAYYVAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300 (520)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~~~--~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (520)
......+++|+|.|.+||+.++. -++.+|-|||||+||.|+.|.+||.+.+...+..+|.++.+.-+. -|..+
T Consensus 205 ~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP~-----~PSdA 279 (668)
T KOG0611|consen 205 DKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREPE-----TPSDA 279 (668)
T ss_pred cccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCCC-----CCchH
Confidence 88888999999999999999875 478999999999999999999999999999999999998776543 36789
Q ss_pred HHHHHHhcccCCCCCCCHHHHHcCCcccc
Q 010013 301 KDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 301 ~~li~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
.-||+.||.++|++|.|++++-.|-|..-
T Consensus 280 ~gLIRwmLmVNP~RRATieDiAsHWWvNw 308 (668)
T KOG0611|consen 280 SGLIRWMLMVNPERRATIEDIASHWWVNW 308 (668)
T ss_pred HHHHHHHHhcCcccchhHHHHhhhheeec
Confidence 99999999999999999999999999864
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-50 Score=344.90 Aligned_cols=257 Identities=33% Similarity=0.631 Sum_probs=236.1
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
...++|.+++.||.|-||.||+|+.+.++-.||+|++.++.........++++|++|-+.|+ ||||+++|++|.+...+
T Consensus 19 ~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~-hpnilrlY~~fhd~~ri 97 (281)
T KOG0580|consen 19 WTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLR-HPNILRLYGYFHDSKRI 97 (281)
T ss_pred cchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccC-CccHHhhhhheecccee
Confidence 34578999999999999999999999999999999998877655556678999999999999 99999999999999999
Q ss_pred EEEEeccCCCchHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 144 NLIMDLCAGGELFDRII--AKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~--~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
|+++||.++|+|+..|. ...++++..+..++.|++.||.|+|.++++||||||+|+|++ ..+.+||+|||.+...
T Consensus 98 yLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg---~~~~lkiAdfGwsV~~ 174 (281)
T KOG0580|consen 98 YLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLG---SAGELKIADFGWSVHA 174 (281)
T ss_pred EEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccC---CCCCeeccCCCceeec
Confidence 99999999999999998 567899999999999999999999999999999999999995 4566999999999875
Q ss_pred CCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHH
Q 010013 222 KPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300 (520)
Q Consensus 222 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (520)
. .......+||..|.+||+..+ ..+..+|+|++|++.||++.|.+||...+..+.+..|.+....++ +.++.++
T Consensus 175 p-~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p----~~is~~a 249 (281)
T KOG0580|consen 175 P-SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFP----STISGGA 249 (281)
T ss_pred C-CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCC----cccChhH
Confidence 5 445577899999999999875 489999999999999999999999999999999999999888776 4789999
Q ss_pred HHHHHHhcccCCCCCCCHHHHHcCCcccc
Q 010013 301 KDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 301 ~~li~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
.++|.+||..+|.+|.+..|++.|||+..
T Consensus 250 ~dlI~~ll~~~p~~r~~l~~v~~hpwI~a 278 (281)
T KOG0580|consen 250 ADLISRLLVKNPIERLALTEVMDHPWIVA 278 (281)
T ss_pred HHHHHHHhccCccccccHHHHhhhHHHHh
Confidence 99999999999999999999999999864
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-48 Score=368.33 Aligned_cols=261 Identities=28% Similarity=0.516 Sum_probs=224.8
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--Ce
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--HS 142 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~--~~ 142 (520)
..+.|..+++||+|.||.||+|++..||+.||+|++..... .+....-..+||.||++|. ||||++|.+...+. ..
T Consensus 115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~-~~~~~~t~~REI~ILr~l~-HpNIikL~eivt~~~~~s 192 (560)
T KOG0600|consen 115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNE-KEGFPITAIREIKILRRLD-HPNIIKLEEIVTSKLSGS 192 (560)
T ss_pred chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccC-CCcchHHHHHHHHHHHhcC-CCcccceeeEEEecCCce
Confidence 34668889999999999999999999999999999976543 2334556789999999999 99999999988765 78
Q ss_pred EEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 143 VNLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
+|+|+|||+. +|.-++...+ .+++.++..+++||+.||.|+|.+||+|||||.+|||+ +.++.+||+|||+|+++
T Consensus 193 iYlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLi---dn~G~LKiaDFGLAr~y 268 (560)
T KOG0600|consen 193 IYLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILI---DNNGVLKIADFGLARFY 268 (560)
T ss_pred EEEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEE---cCCCCEEeccccceeec
Confidence 9999999965 7877776643 69999999999999999999999999999999999999 56888999999999987
Q ss_pred CCCC--cccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCC---
Q 010013 222 KPGD--VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP--- 294 (520)
Q Consensus 222 ~~~~--~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~--- 294 (520)
.... .++..+-|.+|.|||++-| .|+..+|+||+||||.||++|++.|.+.++.+.+..|.+.........|+
T Consensus 269 ~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~k 348 (560)
T KOG0600|consen 269 TPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSK 348 (560)
T ss_pred cCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhcccccc
Confidence 6544 4677788999999998865 49999999999999999999999999999998888886544333333332
Q ss_pred ----------------------CCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 295 ----------------------NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 295 ----------------------~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
.+++...+|+..||..||.+|.||.++|+++||....
T Consensus 349 LP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~p 407 (560)
T KOG0600|consen 349 LPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTEP 407 (560)
T ss_pred CCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccccCC
Confidence 4578899999999999999999999999999995433
|
|
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-48 Score=358.93 Aligned_cols=271 Identities=32% Similarity=0.555 Sum_probs=228.8
Q ss_pred cccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe-
Q 010013 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED- 139 (520)
Q Consensus 61 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~- 139 (520)
....+...|...+.||+|+||.|+.+.++.+|..||||++. +.+.+....++..+|+++|++++ |+||+.+.+++..
T Consensus 16 ~~~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~-~~F~~~~~akRtlRElklLr~~~-HeNIi~l~di~~p~ 93 (359)
T KOG0660|consen 16 ELFEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKIL-NPFENQIDAKRTLRELKLLRHLR-HENIIGLLDIFRPP 93 (359)
T ss_pred eEEeccceecccccccCcceeeEEEEEEcCCCCEeehhhhh-hhhhchHHHHHHHHHHHHHHHhc-CCCcceEEeecccc
Confidence 33456677887899999999999999999999999999985 24556667889999999999999 9999999998865
Q ss_pred ----CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeec
Q 010013 140 ----RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDF 215 (520)
Q Consensus 140 ----~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Df 215 (520)
-+.+|+|+|++ +.+|...++.++.++...+..+++||+.||+|+|+.||+||||||+|++++ .+..+|||||
T Consensus 94 ~~~~f~DvYiV~elM-etDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n---~~c~lKI~DF 169 (359)
T KOG0660|consen 94 SRDKFNDVYLVFELM-ETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLN---ADCDLKICDF 169 (359)
T ss_pred cccccceeEEehhHH-hhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeec---cCCCEEeccc
Confidence 46799999999 678888888887799999999999999999999999999999999999995 4666899999
Q ss_pred ccccccCC---CCcccccccCCCccCchhhc--ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHc-------
Q 010013 216 GLSVFFKP---GDVFKDLVGSAYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR------- 283 (520)
Q Consensus 216 g~a~~~~~---~~~~~~~~gt~~y~aPE~~~--~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~------- 283 (520)
|+|+.... ....+..+.|..|.|||++- ..|+...||||+||++.||++|++.|.|.+....+..|..
T Consensus 170 GLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~ 249 (359)
T KOG0660|consen 170 GLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSE 249 (359)
T ss_pred cceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCH
Confidence 99998753 33456778899999999874 4599999999999999999999999988876444443321
Q ss_pred ----------------CCCCCCCC----CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCCCCCCc
Q 010013 284 ----------------GHIDFSSD----PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKP 337 (520)
Q Consensus 284 ----------------~~~~~~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~~~~~~ 337 (520)
.....+.. .+++.++.+.+|+.+||..||.+|+|++|+|+|||+....+..+.+
T Consensus 250 e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dEP 323 (359)
T KOG0660|consen 250 EDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDEP 323 (359)
T ss_pred HHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccCC
Confidence 11111211 2468899999999999999999999999999999999877776655
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-48 Score=340.29 Aligned_cols=259 Identities=32% Similarity=0.547 Sum_probs=221.4
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
.+|...+.||+|.||.||+|++..||+.||||++......+.- .-...+|++.|+.+. |+||+.++++|...+.+.+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi-~~talREIK~Lqel~-h~nIi~LiD~F~~~~~l~lV 79 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGI-NRTALREIKLLQELK-HPNIIELIDVFPHKSNLSLV 79 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCc-cHHHHHHHHHHHHcc-CcchhhhhhhccCCCceEEE
Confidence 4688899999999999999999999999999999866443222 244679999999999 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 147 MDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
+||++ .+|...++.+. .++...+..++.++++||+|||++.|+||||||.|+|+ +.++.+||+|||+|+.+.+..
T Consensus 80 fEfm~-tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLi---s~~g~lKiADFGLAr~f~~p~ 155 (318)
T KOG0659|consen 80 FEFMP-TDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLI---SSDGQLKIADFGLARFFGSPN 155 (318)
T ss_pred EEecc-ccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEE---cCCCcEEeecccchhccCCCC
Confidence 99995 58988887654 58999999999999999999999999999999999999 567889999999999986543
Q ss_pred -cccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCC---------
Q 010013 226 -VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPW--------- 293 (520)
Q Consensus 226 -~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--------- 293 (520)
.....+-|..|.|||.+-| .|+..+||||.||++.||+.|.+-|.+.++-+.+..|.+.-.......|
T Consensus 156 ~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY 235 (318)
T KOG0659|consen 156 RIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDY 235 (318)
T ss_pred cccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccH
Confidence 3333478999999998754 5999999999999999999999999999998888777553332222222
Q ss_pred ---------------CCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 294 ---------------PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 294 ---------------~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
+..+.++.+|+.+||..||.+|+|+.|+|+|+||....
T Consensus 236 ~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P 288 (318)
T KOG0659|consen 236 VKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLP 288 (318)
T ss_pred HHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCC
Confidence 34577889999999999999999999999999998643
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-47 Score=346.99 Aligned_cols=263 Identities=27% Similarity=0.415 Sum_probs=221.5
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe--CCeE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED--RHSV 143 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~--~~~~ 143 (520)
.+.|....+|++|+||.||+|+++.|++.||+|+++...-...--+ .-.+|+.+|.+++ |||||.+-.+... -+.+
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPI-tsLREIniLl~~~-H~NIV~vkEVVvG~~~d~i 152 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPI-TSLREINILLKAR-HPNIVEVKEVVVGSNMDKI 152 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcc-hhHHHHHHHHhcC-CCCeeeeEEEEecccccee
Confidence 4568899999999999999999999999999999976542222122 3458999999999 9999999887654 4679
Q ss_pred EEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 144 NLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
|+|||||+. +|.+.+...+ ++...++..+..|++.||+|||.+.|+||||||+|+|+ ...+.+||+|||+|+.+.
T Consensus 153 y~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm---~~~G~lKiaDFGLAR~yg 228 (419)
T KOG0663|consen 153 YIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLL---SHKGILKIADFGLAREYG 228 (419)
T ss_pred eeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheee---ccCCcEEecccchhhhhc
Confidence 999999965 8888887754 89999999999999999999999999999999999999 467889999999999986
Q ss_pred CC-CcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCC-----
Q 010013 223 PG-DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP----- 294 (520)
Q Consensus 223 ~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~----- 294 (520)
.. ..++..+-|..|.|||.+-+ .|+...|+||+|||+.||+++++.|.+.++.+.++.|.+.........|+
T Consensus 229 sp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~l 308 (419)
T KOG0663|consen 229 SPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSEL 308 (419)
T ss_pred CCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCcccc
Confidence 54 45677888999999998864 59999999999999999999999999999988888875433222222222
Q ss_pred -----------------------CCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCCCC
Q 010013 295 -----------------------NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDAS 334 (520)
Q Consensus 295 -----------------------~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~~~ 334 (520)
.++....+|++.+|..||.+|.||.|+|+|.||.......
T Consensus 309 p~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~p~ 371 (419)
T KOG0663|consen 309 PAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPLPI 371 (419)
T ss_pred chhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCCCCC
Confidence 1457888999999999999999999999999998654443
|
|
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-47 Score=376.26 Aligned_cols=254 Identities=33% Similarity=0.636 Sum_probs=226.1
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.+.|.+.+.||+|+||.||+|.++.+++.||+|++...........+.+.+|+.+++++. ||||+++++++.+++.+++
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~l 95 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELS-HPFIVNMMCSFQDENRVYF 95 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCC-CCCCCcEEEEEEcCCEEEE
Confidence 367999999999999999999999999999999997654444445677899999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
||||++|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 96 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll---~~~~~~kl~Dfg~~~~~~~~~ 172 (329)
T PTZ00263 96 LLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLL---DNKGHVKVTDFGFAKKVPDRT 172 (329)
T ss_pred EEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEE---CCCCCEEEeeccCceEcCCCc
Confidence 99999999999999988899999999999999999999999999999999999999 457789999999998764322
Q ss_pred cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Q 010013 226 VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (520)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (520)
....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+..+...++. .++..+++||
T Consensus 173 --~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~----~~~~~~~~li 246 (329)
T PTZ00263 173 --FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPN----WFDGRARDLV 246 (329)
T ss_pred --ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCCC----CCCHHHHHHH
Confidence 34579999999999865 4789999999999999999999999998888888888776654432 4788999999
Q ss_pred HHhcccCCCCCCC-----HHHHHcCCcccc
Q 010013 305 KKMLHADPKERLS-----AAEVLNHPWMRV 329 (520)
Q Consensus 305 ~~~l~~dp~~Rps-----~~~~l~~~~~~~ 329 (520)
.+||+.||.+||+ ++++++||||..
T Consensus 247 ~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~ 276 (329)
T PTZ00263 247 KGLLQTDHTKRLGTLKGGVADVKNHPYFHG 276 (329)
T ss_pred HHHhhcCHHHcCCCCCCCHHHHhcCCccCC
Confidence 9999999999997 799999999974
|
|
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-47 Score=353.23 Aligned_cols=259 Identities=32% Similarity=0.583 Sum_probs=233.4
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.++|++.++||.|.-|+||++..++++..+|+|++.+..........++..|-+||..+. ||.++.||..|+.+++.|+
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lD-HPFlPTLYa~fet~~~~cl 154 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLD-HPFLPTLYASFETDKYSCL 154 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcC-CCccchhhheeeccceeEE
Confidence 367899999999999999999999999999999999887776677788899999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 146 IMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
+||||+||+|..+++++ +.+++..++-++..++.||+|||..|||+|||||+|||| .++++|-|+||.++.....
T Consensus 155 ~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILv---redGHIMLsDFDLS~~~~~ 231 (459)
T KOG0610|consen 155 VMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILV---REDGHIMLSDFDLSLRCPV 231 (459)
T ss_pred EEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEE---ecCCcEEeeeccccccCCC
Confidence 99999999999888764 469999999999999999999999999999999999999 6789999999998654210
Q ss_pred ---------------------------------C-C-----------------------cccccccCCCccCchhhccc-
Q 010013 224 ---------------------------------G-D-----------------------VFKDLVGSAYYVAPEVLRRN- 245 (520)
Q Consensus 224 ---------------------------------~-~-----------------------~~~~~~gt~~y~aPE~~~~~- 245 (520)
. . ....++||-.|.|||++.|.
T Consensus 232 ~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~G 311 (459)
T KOG0610|consen 232 SPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEG 311 (459)
T ss_pred CCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCC
Confidence 0 0 01235799999999999864
Q ss_pred CCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC----HHHH
Q 010013 246 YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLS----AAEV 321 (520)
Q Consensus 246 ~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~~~ 321 (520)
.+.++|.|+|||++|||+.|..||.+.+..+.+.+|......++..+ .++..+++||+++|.+||.+|.. +.||
T Consensus 312 HgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~--~vs~~akDLIr~LLvKdP~kRlg~~rGA~eI 389 (459)
T KOG0610|consen 312 HGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEP--EVSSAAKDLIRKLLVKDPSKRLGSKRGAAEI 389 (459)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCC--cchhHHHHHHHHHhccChhhhhccccchHHh
Confidence 89999999999999999999999999999999999999888887754 78899999999999999999998 9999
Q ss_pred HcCCccccC
Q 010013 322 LNHPWMRVD 330 (520)
Q Consensus 322 l~~~~~~~~ 330 (520)
-+||||+..
T Consensus 390 K~HpFF~gV 398 (459)
T KOG0610|consen 390 KRHPFFEGV 398 (459)
T ss_pred hcCccccCC
Confidence 999999864
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-47 Score=370.22 Aligned_cols=253 Identities=30% Similarity=0.575 Sum_probs=224.3
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+.+.||+|+||.||+|.++.+++.||+|++...........+.+.+|+.+++++. ||||+++++++.+...+++|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv 79 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVS-HPFIIRLFWTEHDQRFLYML 79 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCC-CCcHhhhHhhhccCCeEEEE
Confidence 36899999999999999999999999999999987544333344567889999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCc
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 226 (520)
|||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~---~~~~~kl~Dfg~~~~~~~~-- 154 (291)
T cd05612 80 MEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLD---KEGHIKLTDFGFAKKLRDR-- 154 (291)
T ss_pred EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC---CCCCEEEEecCcchhccCC--
Confidence 99999999999999888999999999999999999999999999999999999994 5678999999999876432
Q ss_pred ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHH
Q 010013 227 FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305 (520)
Q Consensus 227 ~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 305 (520)
.....|++.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+..+...++. .++..++++|.
T Consensus 155 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~----~~~~~~~~li~ 230 (291)
T cd05612 155 TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPR----HLDLYAKDLIK 230 (291)
T ss_pred cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCCc----cCCHHHHHHHH
Confidence 234579999999999865 4789999999999999999999999998888888888877655443 46889999999
Q ss_pred HhcccCCCCCCC-----HHHHHcCCcccc
Q 010013 306 KMLHADPKERLS-----AAEVLNHPWMRV 329 (520)
Q Consensus 306 ~~l~~dp~~Rps-----~~~~l~~~~~~~ 329 (520)
+||..||.+||+ +.++++||||..
T Consensus 231 ~~l~~dp~~R~~~~~~~~~~~l~h~~~~~ 259 (291)
T cd05612 231 KLLVVDRTRRLGNMKNGADDVKNHRWFKS 259 (291)
T ss_pred HHcCCCHHHccCCccCCHHHHhcCccccC
Confidence 999999999995 999999999974
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-47 Score=373.80 Aligned_cols=250 Identities=32% Similarity=0.591 Sum_probs=220.3
Q ss_pred ceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 010013 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~g 152 (520)
+.||+|+||.||+|.++.+|+.||+|++.+...........+.+|+.+++++. ||||+++++++...+.+|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-hp~i~~~~~~~~~~~~~~lv~e~~~~ 79 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTR-HPFLTALKYSFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCC-CCCCCCEEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999999999999999997654444445567889999999998 99999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC-CCCcccccc
Q 010013 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLV 231 (520)
Q Consensus 153 ~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~~~ 231 (520)
++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++... .........
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~---~~~~~kl~DfG~a~~~~~~~~~~~~~~ 156 (323)
T cd05571 80 GELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLD---KDGHIKITDFGLCKEGISDGATMKTFC 156 (323)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEEC---CCCCEEEeeCCCCcccccCCCccccee
Confidence 99999998888999999999999999999999999999999999999994 56789999999987642 222334567
Q ss_pred cCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhccc
Q 010013 232 GSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310 (520)
Q Consensus 232 gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 310 (520)
||+.|+|||++.+ .++.++|||||||++|+|++|..||...........+......++ ..++.++.++|.+||..
T Consensus 157 gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p----~~~~~~~~~li~~~L~~ 232 (323)
T cd05571 157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP----RTLSPEAKSLLAGLLKK 232 (323)
T ss_pred cCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHccC
Confidence 9999999999864 589999999999999999999999998888887777776655443 36789999999999999
Q ss_pred CCCCCC-----CHHHHHcCCccccC
Q 010013 311 DPKERL-----SAAEVLNHPWMRVD 330 (520)
Q Consensus 311 dp~~Rp-----s~~~~l~~~~~~~~ 330 (520)
||++|| ++.++++||||...
T Consensus 233 dP~~R~~~~~~~~~~ll~h~~f~~~ 257 (323)
T cd05571 233 DPKQRLGGGPEDAKEIMEHRFFASI 257 (323)
T ss_pred CHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 999999 89999999999753
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-47 Score=364.76 Aligned_cols=258 Identities=28% Similarity=0.476 Sum_probs=215.8
Q ss_pred eeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 010013 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMD 148 (520)
Q Consensus 69 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e 148 (520)
|++.+.||+|+||.||+|.+..+++.||+|.+.............+.+|+.+++++. |++|+++++++.+.+..++|||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVN-SRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcC-CCcEEEEEEEEccCCeEEEEEE
Confidence 778899999999999999999999999999987654433334456789999999998 9999999999999999999999
Q ss_pred ccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCc
Q 010013 149 LCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226 (520)
Q Consensus 149 ~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 226 (520)
|+++|+|.+.+... ..+++..+..++.|++.||.|||+.||+||||||+|||+ +.++.++|+|||++........
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill---~~~~~~kl~Dfg~~~~~~~~~~ 157 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILL---DDRGHIRISDLGLAVQIPEGET 157 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEE---CCCCCEEEeeCCCcEEcCCCCe
Confidence 99999998877643 368999999999999999999999999999999999999 4567899999999987654444
Q ss_pred ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHH
Q 010013 227 FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305 (520)
Q Consensus 227 ~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 305 (520)
.....|++.|+|||++.+ .++.++|||||||++|+|++|+.||...........+..............++..+.+|+.
T Consensus 158 ~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~ 237 (285)
T cd05631 158 VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICR 237 (285)
T ss_pred ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCccCCHHHHHHHH
Confidence 455679999999999864 5899999999999999999999999876543222222221111122223467899999999
Q ss_pred HhcccCCCCCCC-----HHHHHcCCccccC
Q 010013 306 KMLHADPKERLS-----AAEVLNHPWMRVD 330 (520)
Q Consensus 306 ~~l~~dp~~Rps-----~~~~l~~~~~~~~ 330 (520)
+||+.||++||+ ++++++||||...
T Consensus 238 ~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05631 238 MLLTKNPKERLGCRGNGAAGVKQHPIFKNI 267 (285)
T ss_pred HHhhcCHHHhcCCCCCCHHHHhcCHhhcCC
Confidence 999999999997 8999999999753
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-46 Score=375.26 Aligned_cols=259 Identities=28% Similarity=0.499 Sum_probs=220.5
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+.+.||+|+||+||+|.++.+++.||+|++.+...........+.+|+.++.++. ||||+++++.+.+...+|+|
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~-~~~iv~~~~~~~~~~~~~lv 79 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEAD-SLWVVKMFYSFQDKLNLYLI 79 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCC-CCCcceEEEEEecCCeEEEE
Confidence 36899999999999999999999999999999997654434445567889999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC-
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~- 225 (520)
|||++||+|.+++.+.+.+++..+..++.|++.||.|||++||+||||||+|||++ .++.+||+|||++.......
T Consensus 80 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~---~~~~vkL~DFGla~~~~~~~~ 156 (363)
T cd05628 80 MEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLD---SKGHVKLSDFGLCTGLKKAHR 156 (363)
T ss_pred EcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEEC---CCCCEEEeeccCccccccccc
Confidence 99999999999999888999999999999999999999999999999999999994 56789999999987543210
Q ss_pred -----------------------------------cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCC
Q 010013 226 -----------------------------------VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPF 269 (520)
Q Consensus 226 -----------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf 269 (520)
.....+||+.|+|||++.+ .++.++|||||||++|+|++|..||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf 236 (363)
T cd05628 157 TEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF 236 (363)
T ss_pred ccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCC
Confidence 0123579999999999864 5899999999999999999999999
Q ss_pred CCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCC---CCCCHHHHHcCCccccC
Q 010013 270 WGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPK---ERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~---~Rps~~~~l~~~~~~~~ 330 (520)
.+....+....+.........+....+++.++++|.+|+. +|. .||+++++++||||+..
T Consensus 237 ~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~ 299 (363)
T cd05628 237 CSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGV 299 (363)
T ss_pred CCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCC
Confidence 9988888888877644333332334578999999999765 444 46899999999999854
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-46 Score=370.71 Aligned_cols=257 Identities=24% Similarity=0.399 Sum_probs=207.9
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
..+.|.+++.||+|+||.||+|.+..+++.||||++.... .....+.+.+|+.+++++. |+||+++++++...+.++
T Consensus 72 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~ 148 (353)
T PLN00034 72 SLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH--EDTVRRQICREIEILRDVN-HPNVVKCHDMFDHNGEIQ 148 (353)
T ss_pred CHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC--cHHHHHHHHHHHHHHHhCC-CCCcceeeeEeccCCeEE
Confidence 3467888999999999999999999999999999985432 2234567889999999998 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
+||||+.+++|.+. ...++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 149 lv~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~~~~kL~DfG~~~~~~~~ 221 (353)
T PLN00034 149 VLLEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLIN---SAKNVKIADFGVSRILAQT 221 (353)
T ss_pred EEEecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc---CCCCEEEcccccceecccc
Confidence 99999999998643 3457788889999999999999999999999999999994 5678999999999876432
Q ss_pred C-cccccccCCCccCchhhcc------cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 010013 225 D-VFKDLVGSAYYVAPEVLRR------NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (520)
Q Consensus 225 ~-~~~~~~gt~~y~aPE~~~~------~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (520)
. ......||..|+|||++.. ..+.++|||||||++|+|++|+.||...........+..............++
T Consensus 222 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (353)
T PLN00034 222 MDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATAS 301 (353)
T ss_pred cccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccC
Confidence 2 2244579999999998742 23568999999999999999999997443222222111111111122234678
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 298 ~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
.++.+||.+||+.||++|||+.|+|+||||....
T Consensus 302 ~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~ 335 (353)
T PLN00034 302 REFRHFISCCLQREPAKRWSAMQLLQHPFILRAQ 335 (353)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhcCcccccCC
Confidence 9999999999999999999999999999998653
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-46 Score=365.33 Aligned_cols=248 Identities=27% Similarity=0.433 Sum_probs=212.1
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC-eEEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH-SVNLI 146 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~-~~~lv 146 (520)
...+.+.||+|+||+||+|.++.+ ..||+|++......... .+.+.+|+.+|.+++ |||||+++|++.... .+++|
T Consensus 42 ~l~~~~~iG~G~~g~V~~~~~~g~-~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~-HpNIV~f~G~~~~~~~~~~iV 118 (362)
T KOG0192|consen 42 ELPIEEVLGSGSFGTVYKGKWRGT-DVVAVKIISDPDFDDES-RKAFRREASLLSRLR-HPNIVQFYGACTSPPGSLCIV 118 (362)
T ss_pred HhhhhhhcccCCceeEEEEEeCCc-eeEEEEEecchhcChHH-HHHHHHHHHHHHhCC-CCCeeeEEEEEcCCCCceEEE
Confidence 345567799999999999999753 22999999765544433 778999999999999 999999999999887 79999
Q ss_pred EeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHcC-CeeecCCCCcEEeecCCCCC-CeeEeecccccccC
Q 010013 147 MDLCAGGELFDRIIA--KGHYSERAAANLCRQMVTVVHYCHSMG-VMHRDLKPENFLFSSSAEDS-PLKATDFGLSVFFK 222 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~--~~~l~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIll~~~~~~~-~~kl~Dfg~a~~~~ 222 (520)
|||+++|+|..++.. ++.++...+..++.+|+.||.|||+++ ||||||||+|||++ .+. ++||+|||+++...
T Consensus 119 tEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~---~~~~~~KI~DFGlsr~~~ 195 (362)
T KOG0192|consen 119 TEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVD---LKGKTLKIADFGLSREKV 195 (362)
T ss_pred EEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEc---CCCCEEEECCCccceeec
Confidence 999999999999988 678999999999999999999999999 99999999999995 454 89999999998876
Q ss_pred CC-CcccccccCCCccCchhhcc---cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCH
Q 010013 223 PG-DVFKDLVGSAYYVAPEVLRR---NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298 (520)
Q Consensus 223 ~~-~~~~~~~gt~~y~aPE~~~~---~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (520)
.. ...+...||+.|||||++.+ .|+.++||||||+++|||+||+.||.+.........+.........+ ..+++
T Consensus 196 ~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p--~~~~~ 273 (362)
T KOG0192|consen 196 ISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIP--KECPP 273 (362)
T ss_pred cccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCC--ccCCH
Confidence 54 33444789999999999984 39999999999999999999999999988866666665443332221 24899
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 299 SAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 299 ~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.+..++.+||+.||++||+..+++.
T Consensus 274 ~l~~l~~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 274 HLSSLMERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred HHHHHHHHhCCCCCCcCCCHHHHHH
Confidence 9999999999999999999998865
|
|
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-46 Score=371.87 Aligned_cols=257 Identities=31% Similarity=0.505 Sum_probs=223.9
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+.+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.++..+. ||||+++++++...+..|+|
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~iv~~~~~~~~~~~~~lv 79 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTK-SEWLVKLLYAFQDDEYLYLA 79 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCC-CCCCccEEEEEEcCCEEEEE
Confidence 36999999999999999999999999999999997654433345567889999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCc
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 226 (520)
|||++|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..... .
T Consensus 80 ~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kL~Dfg~a~~~~~--~ 154 (333)
T cd05600 80 MEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLI---DASGHIKLTDFGLSKGIVT--Y 154 (333)
T ss_pred EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---CCCCCEEEEeCcCCccccc--c
Confidence 9999999999999888889999999999999999999999999999999999999 4567899999999986543 2
Q ss_pred ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCC----CCCCHHHH
Q 010013 227 FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPW----PNISSSAK 301 (520)
Q Consensus 227 ~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 301 (520)
.....||+.|+|||++.+ .++.++|||||||++|+|++|..||......+....+......+....+ ..++.++.
T Consensus 155 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~ 234 (333)
T cd05600 155 ANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAW 234 (333)
T ss_pred cCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHH
Confidence 345679999999999864 5889999999999999999999999988887777766554322222211 25689999
Q ss_pred HHHHHhcccCCCCCCCHHHHHcCCcccc
Q 010013 302 DIVKKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 302 ~li~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
++|.+||..+|++|||+.++++||||..
T Consensus 235 ~li~~~l~~~~~rr~s~~~ll~h~~~~~ 262 (333)
T cd05600 235 DLITKLINDPSRRFGSLEDIKNHPFFKE 262 (333)
T ss_pred HHHHHHhhChhhhcCCHHHHHhCcccCC
Confidence 9999999999999999999999999984
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-47 Score=344.68 Aligned_cols=266 Identities=36% Similarity=0.656 Sum_probs=235.1
Q ss_pred cccceee-cceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 65 VRNTYIF-GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 65 ~~~~y~~-~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
+.+-|++ .+.||+|+|+.|-.+....+|..||||++.+. ......++.+|++++.++++|+||++|+++|+++...
T Consensus 75 F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq---~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~F 151 (463)
T KOG0607|consen 75 FEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ---PGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRF 151 (463)
T ss_pred HHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcC---CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceE
Confidence 3445666 46789999999999999999999999999765 3355688999999999999999999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
|+|||.+.||.|..++.+...+++.++.++.+.|+.||.+||.+||.||||||+|||....+.-.-+|||||.+...+..
T Consensus 152 YLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~ 231 (463)
T KOG0607|consen 152 YLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKL 231 (463)
T ss_pred EEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeecccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999997655566799999998765432
Q ss_pred CC--------cccccccCCCccCchhhc---c---cCCCcchhHHHHHHHHHHhhCCCCCCCCC---------------H
Q 010013 224 GD--------VFKDLVGSAYYVAPEVLR---R---NYGAEADIWSAGVILYILLSGVPPFWGET---------------E 274 (520)
Q Consensus 224 ~~--------~~~~~~gt~~y~aPE~~~---~---~~~~~~Dv~slG~~l~~ll~g~~pf~~~~---------------~ 274 (520)
.. ...+.+|+..|||||+.. + .|+.++|.|||||++|.|++|.+||.+.- .
T Consensus 232 ~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ 311 (463)
T KOG0607|consen 232 NNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQ 311 (463)
T ss_pred CCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHH
Confidence 21 233457888999999752 2 48999999999999999999999996542 2
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCCC
Q 010013 275 QSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDA 333 (520)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~~ 333 (520)
+.+++.|..+.+.|+...|..+|.+.+++++.+|..|+.+|.++.++++|||++.....
T Consensus 312 ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~e 370 (463)
T KOG0607|consen 312 NKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAPE 370 (463)
T ss_pred HHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccchh
Confidence 57889999999999999999999999999999999999999999999999999876554
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-48 Score=366.13 Aligned_cols=254 Identities=30% Similarity=0.489 Sum_probs=225.0
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
..|+..+.||+|+||.||+|.+..+++.||+|++.... ....++.+.+|+.+|.++. ++||.++|+.|..+..++++
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~--~~deIediqqei~~Ls~~~-~~~it~yygsyl~g~~Lwii 89 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEE--AEDEIEDIQQEISVLSQCD-SPNITEYYGSYLKGTKLWII 89 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhh--cchhhHHHHHHHHHHHhcC-cchHHhhhhheeecccHHHH
Confidence 45777899999999999999999999999999997654 3455788999999999999 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCc
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 226 (520)
||||.||++.+.+...+.+.+..+.-++++++.||.|||..+.+|||||+.|||+. .++.+||+|||.+........
T Consensus 90 Mey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s---~~g~vkl~DfgVa~ql~~~~~ 166 (467)
T KOG0201|consen 90 MEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLS---ESGDVKLADFGVAGQLTNTVK 166 (467)
T ss_pred HHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEe---ccCcEEEEecceeeeeechhh
Confidence 99999999999999888889999999999999999999999999999999999995 457899999999998765443
Q ss_pred -ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Q 010013 227 -FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (520)
Q Consensus 227 -~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (520)
..+++|||.|||||++++ .|+.++||||||++.+||++|.+|+....+...+..|-+..++... ..+++.+++||
T Consensus 167 rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP~L~---~~~S~~~kEFV 243 (467)
T KOG0201|consen 167 RRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPPRLD---GDFSPPFKEFV 243 (467)
T ss_pred ccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCCccc---cccCHHHHHHH
Confidence 367899999999999986 6999999999999999999999999887775555444443333222 36789999999
Q ss_pred HHhcccCCCCCCCHHHHHcCCcccc
Q 010013 305 KKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 305 ~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
..||..||+.||||.++|+|+|++.
T Consensus 244 ~~CL~k~P~~RpsA~~LLKh~FIk~ 268 (467)
T KOG0201|consen 244 EACLDKNPEFRPSAKELLKHKFIKR 268 (467)
T ss_pred HHHhhcCcccCcCHHHHhhhHHHHh
Confidence 9999999999999999999999987
|
|
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-46 Score=376.05 Aligned_cols=259 Identities=29% Similarity=0.550 Sum_probs=223.5
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+.+.||+|+||.||+|.+..+++.||||++.............+.+|+.++..+. ||||+++++++.++..+++|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~-h~~iv~~~~~~~~~~~~~lv 79 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEAD-NPWVVKLYYSFQDENYLYLI 79 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCCcceEEEEEcCCeEEEE
Confidence 36899999999999999999999999999999997654434445567889999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC-
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~- 225 (520)
|||++||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.++|+|||++..+....
T Consensus 80 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~---~~~~~~kl~Dfg~~~~~~~~~~ 156 (364)
T cd05599 80 MEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLL---DAKGHIKLSDFGLCTGLKKSHR 156 (364)
T ss_pred ECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE---CCCCCEEEeecccceecccccc
Confidence 9999999999999988889999999999999999999999999999999999999 457789999999987543211
Q ss_pred --------------------------------------cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCC
Q 010013 226 --------------------------------------VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGV 266 (520)
Q Consensus 226 --------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~ 266 (520)
.....+||+.|+|||++.+ .++.++|||||||++|+|++|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~ 236 (364)
T cd05599 157 TEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGY 236 (364)
T ss_pred ccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCC
Confidence 0012469999999998864 5899999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC---HHHHHcCCccccC
Q 010013 267 PPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLS---AAEVLNHPWMRVD 330 (520)
Q Consensus 267 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps---~~~~l~~~~~~~~ 330 (520)
.||.+....+....+......+.......+++.+.++|.+||. +|.+|++ +.++|+||||+..
T Consensus 237 ~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~ 302 (364)
T cd05599 237 PPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGV 302 (364)
T ss_pred CCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence 9999988877777776654443333334678999999999996 9999998 9999999999753
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-46 Score=370.12 Aligned_cols=254 Identities=32% Similarity=0.593 Sum_probs=224.5
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCC-cEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTK-QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~-~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
.++|.+.+.||+|+||.||+|.++.++ ..||+|.+...........+.+.+|+.+++.+. ||||+++++++.+.+.++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~Iv~~~~~~~~~~~~~ 107 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYIN-HPFCVNLYGSFKDESYLY 107 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC-CCCCcceEEEEEeCCEEE
Confidence 467999999999999999999977654 689999987654444445677889999999998 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
+||||++||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 108 lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl---~~~~~ikL~DFG~a~~~~~~ 184 (340)
T PTZ00426 108 LVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLL---DKDGFIKMTDFGFAKVVDTR 184 (340)
T ss_pred EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEE---CCCCCEEEecCCCCeecCCC
Confidence 999999999999999988899999999999999999999999999999999999999 45778999999999876432
Q ss_pred CcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHH
Q 010013 225 DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (520)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (520)
.....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+..+...++ +.++..+.++
T Consensus 185 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~l 258 (340)
T PTZ00426 185 --TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFP----KFLDNNCKHL 258 (340)
T ss_pred --cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHHH
Confidence 234679999999999865 488999999999999999999999999888888888887765543 3578999999
Q ss_pred HHHhcccCCCCCC-----CHHHHHcCCcccc
Q 010013 304 VKKMLHADPKERL-----SAAEVLNHPWMRV 329 (520)
Q Consensus 304 i~~~l~~dp~~Rp-----s~~~~l~~~~~~~ 329 (520)
|.+||+.||++|+ |++++++||||..
T Consensus 259 i~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~ 289 (340)
T PTZ00426 259 MKKLLSHDLTKRYGNLKKGAQNVKEHPWFGN 289 (340)
T ss_pred HHHHcccCHHHcCCCCCCCHHHHHcCCCcCC
Confidence 9999999999995 8999999999975
|
|
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-46 Score=366.10 Aligned_cols=247 Identities=30% Similarity=0.588 Sum_probs=217.7
Q ss_pred eeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCCCc
Q 010013 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGE 154 (520)
Q Consensus 75 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~g~~ 154 (520)
||+|+||.||+|.+..+++.||+|++.............+.+|+.++.++. ||||+++++++...+..++||||++|++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 79 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVN-CPFIVPLKFSFQSPEKLYLVLAFINGGE 79 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCcEeceeeEEecCCeEEEEEcCCCCCc
Confidence 799999999999999999999999987654444455677889999999998 9999999999999999999999999999
Q ss_pred hHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC-CCcccccccC
Q 010013 155 LFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-GDVFKDLVGS 233 (520)
Q Consensus 155 L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~gt 233 (520)
|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..... ........||
T Consensus 80 L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt 156 (312)
T cd05585 80 LFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILL---DYQGHIALCDFGLCKLNMKDDDKTNTFCGT 156 (312)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEE---CCCCcEEEEECcccccCccCCCccccccCC
Confidence 99999888889999999999999999999999999999999999999 4567899999999886432 2223446799
Q ss_pred CCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCC
Q 010013 234 AYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312 (520)
Q Consensus 234 ~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp 312 (520)
+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+......++ ..+++.+.++|.+||..||
T Consensus 157 ~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~L~~dp 232 (312)
T cd05585 157 PEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFP----DGFDRDAKDLLIGLLSRDP 232 (312)
T ss_pred cccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCC----CcCCHHHHHHHHHHcCCCH
Confidence 99999999865 488999999999999999999999999888888887777655443 3678999999999999999
Q ss_pred CCCC---CHHHHHcCCcccc
Q 010013 313 KERL---SAAEVLNHPWMRV 329 (520)
Q Consensus 313 ~~Rp---s~~~~l~~~~~~~ 329 (520)
++|| ++.++|+||||..
T Consensus 233 ~~R~~~~~~~e~l~hp~~~~ 252 (312)
T cd05585 233 TRRLGYNGAQEIKNHPFFSQ 252 (312)
T ss_pred HHcCCCCCHHHHHcCCCcCC
Confidence 9997 5899999999975
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-46 Score=374.29 Aligned_cols=258 Identities=30% Similarity=0.528 Sum_probs=218.9
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 147 (520)
.|.+++.||+|+||+||+|.++.+++.||+|++...........+.+.+|+.+++++. ||||+++++++.+.+.+++||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~-h~~iv~l~~~~~~~~~~~lv~ 80 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEAD-NEWVVKLYYSFQDKDNLYFVM 80 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcC-CCCeeeeEEEEecCCEEEEEE
Confidence 5889999999999999999999999999999997655545555677899999999998 999999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC--
Q 010013 148 DLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD-- 225 (520)
Q Consensus 148 e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-- 225 (520)
||++||+|.+++.+.+.+++..+..++.||+.||.|||+.||+||||||+|||++ .++.+||+|||++..+....
T Consensus 81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~---~~~~~kL~DFGl~~~~~~~~~~ 157 (381)
T cd05626 81 DYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILID---LDGHIKLTDFGLCTGFRWTHNS 157 (381)
T ss_pred ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEEC---CCCCEEEeeCcCCccccccccc
Confidence 9999999999999888899999999999999999999999999999999999994 56789999999975431000
Q ss_pred ----------------------------------------------cccccccCCCccCchhhcc-cCCCcchhHHHHHH
Q 010013 226 ----------------------------------------------VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVI 258 (520)
Q Consensus 226 ----------------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~ 258 (520)
.....+||+.|+|||++.+ .++.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~i 237 (381)
T cd05626 158 KYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVI 237 (381)
T ss_pred ccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhH
Confidence 0123479999999999864 58999999999999
Q ss_pred HHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhc--ccCCCCCCCHHHHHcCCcccc
Q 010013 259 LYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKML--HADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 259 l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l--~~dp~~Rps~~~~l~~~~~~~ 329 (520)
+|+|++|..||...........+..............+++++.+||.+|+ ..++..|+++.++++||||..
T Consensus 238 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~ 310 (381)
T cd05626 238 LFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSE 310 (381)
T ss_pred HHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCC
Confidence 99999999999988776666666543333333334568999999999955 455556999999999999974
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-46 Score=366.91 Aligned_cols=249 Identities=31% Similarity=0.580 Sum_probs=218.8
Q ss_pred ceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 010013 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~g 152 (520)
+.||+|+||.||++.+..+++.||+|++.+...........+.+|+.+++.+. ||||+++++++...+.+++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv~Ey~~~ 79 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTR-HPFLTSLKYSFQTKDRLCFVMEYVNG 79 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCCcceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999999999999999997655444455677889999999998 99999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC-CCcccccc
Q 010013 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-GDVFKDLV 231 (520)
Q Consensus 153 ~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~ 231 (520)
++|..++...+.+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..... ........
T Consensus 80 g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~---~~~~~kL~DfG~~~~~~~~~~~~~~~~ 156 (328)
T cd05593 80 GELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLD---KDGHIKITDFGLCKEGITDAATMKTFC 156 (328)
T ss_pred CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEEC---CCCcEEEecCcCCccCCCccccccccc
Confidence 99999998888899999999999999999999999999999999999994 567899999999876422 22234467
Q ss_pred cCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhccc
Q 010013 232 GSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310 (520)
Q Consensus 232 gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 310 (520)
||+.|+|||++.+ .++.++|||||||++|+|++|..||...........+......++ ..++.++.++|.+||..
T Consensus 157 gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p----~~~~~~~~~li~~~L~~ 232 (328)
T cd05593 157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFP----RTLSADAKSLLSGLLIK 232 (328)
T ss_pred CCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCC----CCCCHHHHHHHHHHcCC
Confidence 9999999999864 589999999999999999999999998888777777766555443 36789999999999999
Q ss_pred CCCCCC-----CHHHHHcCCcccc
Q 010013 311 DPKERL-----SAAEVLNHPWMRV 329 (520)
Q Consensus 311 dp~~Rp-----s~~~~l~~~~~~~ 329 (520)
||++|+ ++.++++||||..
T Consensus 233 dP~~R~~~~~~~~~~il~h~~~~~ 256 (328)
T cd05593 233 DPNKRLGGGPDDAKEIMRHSFFTG 256 (328)
T ss_pred CHHHcCCCCCCCHHHHhcCCCcCC
Confidence 999997 8999999999974
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-46 Score=365.40 Aligned_cols=250 Identities=29% Similarity=0.554 Sum_probs=219.3
Q ss_pred ceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 010013 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~g 152 (520)
+.||+|+||.||+|.++.+++.||+|++.+.........+.+..|..++..+..||||+++++++...+.+|+||||++|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999999999999999987654434445667788999998886699999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC-CCCcccccc
Q 010013 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLV 231 (520)
Q Consensus 153 ~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~~~ 231 (520)
++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.... .........
T Consensus 81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli---~~~~~~kL~DfG~~~~~~~~~~~~~~~~ 157 (320)
T cd05590 81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLL---DHEGHCKLADFGMCKEGIFNGKTTSTFC 157 (320)
T ss_pred chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEE---CCCCcEEEeeCCCCeecCcCCCcccccc
Confidence 9999999888899999999999999999999999999999999999999 456789999999987642 222334567
Q ss_pred cCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhccc
Q 010013 232 GSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310 (520)
Q Consensus 232 gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 310 (520)
||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+......++ ..++.++.++|.+||+.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~L~~ 233 (320)
T cd05590 158 GTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP----TWLSQDAVDILKAFMTK 233 (320)
T ss_pred cCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHHHHHHHccc
Confidence 9999999999864 488999999999999999999999999988888888877655443 35789999999999999
Q ss_pred CCCCCCCH------HHHHcCCcccc
Q 010013 311 DPKERLSA------AEVLNHPWMRV 329 (520)
Q Consensus 311 dp~~Rps~------~~~l~~~~~~~ 329 (520)
||++||++ +++++||||..
T Consensus 234 dP~~R~~~~~~~~~~~~~~h~~f~~ 258 (320)
T cd05590 234 NPTMRLGSLTLGGEEAILRHPFFKE 258 (320)
T ss_pred CHHHCCCCCCCCCHHHHHcCCCcCC
Confidence 99999998 99999999974
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-46 Score=365.89 Aligned_cols=249 Identities=33% Similarity=0.599 Sum_probs=218.8
Q ss_pred ceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 010013 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~g 152 (520)
+.||+|+||.||++.++.+|..||+|++.............+.+|+.+++++. ||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR-HPFLTALKYAFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCC-CCCCcceeeEEecCCEEEEEEeCCCC
Confidence 46999999999999999999999999997654444445667788999999998 99999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC-CCcccccc
Q 010013 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-GDVFKDLV 231 (520)
Q Consensus 153 ~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~ 231 (520)
++|..++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..... ........
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 156 (323)
T cd05595 80 GELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFC 156 (323)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE---cCCCCEEecccHHhccccCCCCcccccc
Confidence 9999999888889999999999999999999999999999999999999 4567899999999876422 22334467
Q ss_pred cCCCccCchhhc-ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhccc
Q 010013 232 GSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310 (520)
Q Consensus 232 gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 310 (520)
||+.|+|||++. +.++.++|||||||++|+|++|..||...........+......++ ..+++.+.++|.+||..
T Consensus 157 gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p----~~~~~~~~~li~~~L~~ 232 (323)
T cd05595 157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP----RTLSPEAKSLLAGLLKK 232 (323)
T ss_pred CCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHHHHHHHccC
Confidence 999999999986 4589999999999999999999999998888777777766655443 36789999999999999
Q ss_pred CCCCCC-----CHHHHHcCCcccc
Q 010013 311 DPKERL-----SAAEVLNHPWMRV 329 (520)
Q Consensus 311 dp~~Rp-----s~~~~l~~~~~~~ 329 (520)
||++|| ++.++++||||..
T Consensus 233 dP~~R~~~~~~~~~~~l~h~~~~~ 256 (323)
T cd05595 233 DPKQRLGGGPSDAKEVMEHRFFLS 256 (323)
T ss_pred CHHHhCCCCCCCHHHHHcCCCcCC
Confidence 999998 9999999999975
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-46 Score=374.64 Aligned_cols=258 Identities=28% Similarity=0.532 Sum_probs=219.0
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+.+.||+|+||.||+|.++.+++.||+|++.+.........+.+.+|+.+++++. ||||+++++++.+...+|+|
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~~~~~~~~~~~~~lv 79 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESD-SPWVVSLYYSFQDAQYLYLI 79 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCC-CCCcceEEEEEEcCCeeEEE
Confidence 36899999999999999999999999999999987654434445677889999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC-
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~- 225 (520)
|||++||+|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.+||+|||+++.+....
T Consensus 80 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll---~~~~~~kl~DfGla~~~~~~~~ 156 (377)
T cd05629 80 MEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILI---DRGGHIKLSDFGLSTGFHKQHD 156 (377)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---CCCCCEEEeecccccccccccc
Confidence 9999999999999888889999999999999999999999999999999999999 456789999999986321100
Q ss_pred -----------------------------------------------cccccccCCCccCchhhcc-cCCCcchhHHHHH
Q 010013 226 -----------------------------------------------VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGV 257 (520)
Q Consensus 226 -----------------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~ 257 (520)
.....+||+.|+|||++.+ .++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv 236 (377)
T cd05629 157 SAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGA 236 (377)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecch
Confidence 0012469999999999864 5899999999999
Q ss_pred HHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCC---CCHHHHHcCCcccc
Q 010013 258 ILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKER---LSAAEVLNHPWMRV 329 (520)
Q Consensus 258 ~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R---ps~~~~l~~~~~~~ 329 (520)
++|+|++|..||.+....+....+......+..+....++.++.++|.+||. +|.+| +|+.++++||||..
T Consensus 237 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~ 310 (377)
T cd05629 237 IMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRG 310 (377)
T ss_pred hhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCC
Confidence 9999999999999888777777776543333322334578999999999997 66665 59999999999974
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-46 Score=375.28 Aligned_cols=258 Identities=30% Similarity=0.549 Sum_probs=220.9
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+.+.||+|+||.||+|++..+++.||+|++.+.........+.+.+|+.+++++. ||||+++++.+.+++.+++|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-h~~iv~~~~~~~~~~~~~lv 79 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEAD-NEWVVKLYYSFQDKDNLYFV 79 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCC-CCCcceEEEEEEcCCEEEEE
Confidence 36999999999999999999999999999999987554433444567889999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC--
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG-- 224 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~-- 224 (520)
|||++||+|.+++.+.+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..+...
T Consensus 80 ~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill---~~~~~ikL~DFG~a~~~~~~~~ 156 (376)
T cd05598 80 MDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHD 156 (376)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEE---CCCCCEEEEeCCCCcccccccc
Confidence 9999999999999888889999999999999999999999999999999999999 45678999999997532100
Q ss_pred ------------------------------------------CcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHH
Q 010013 225 ------------------------------------------DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYI 261 (520)
Q Consensus 225 ------------------------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ 261 (520)
......+||+.|+|||++.+ .++.++|||||||++|+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilye 236 (376)
T cd05598 157 SKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 236 (376)
T ss_pred ccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeee
Confidence 00113479999999999865 58899999999999999
Q ss_pred HhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC---CHHHHHcCCcccc
Q 010013 262 LLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERL---SAAEVLNHPWMRV 329 (520)
Q Consensus 262 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp---s~~~~l~~~~~~~ 329 (520)
|++|+.||.+....+....+..............++..+.++|.+|+ .+|.+|+ |+.++++||||+.
T Consensus 237 ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~ 306 (376)
T cd05598 237 MLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKG 306 (376)
T ss_pred hhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCC
Confidence 99999999988877766666554444433344578999999999987 5999999 9999999999975
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-46 Score=372.20 Aligned_cols=258 Identities=34% Similarity=0.631 Sum_probs=225.0
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+.+.||+|+||.||+|.+..+++.||+|++.............+..|+.++..+. ||||+++++++.+++.+++|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv 79 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADAD-SPWIVKLYYSFQDEEHLYLV 79 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcC-CCCccchhhheecCCeEEEE
Confidence 36999999999999999999999999999999997654444455677899999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC-
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~- 225 (520)
|||++|++|.+++.+.+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 80 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll---~~~~~~kL~Dfg~~~~~~~~~~ 156 (350)
T cd05573 80 MEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILI---DADGHIKLADFGLCKKMNKAKD 156 (350)
T ss_pred EcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEeecCCCCccCcccCc
Confidence 9999999999999888889999999999999999999999999999999999999 456789999999998764332
Q ss_pred -----------------------------cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHH
Q 010013 226 -----------------------------VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQ 275 (520)
Q Consensus 226 -----------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~ 275 (520)
......||+.|+|||++.+ .++.++|||||||++|+|++|+.||......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~ 236 (350)
T cd05573 157 REYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQ 236 (350)
T ss_pred ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHH
Confidence 2234568999999999865 5899999999999999999999999998887
Q ss_pred HHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-HHHHHcCCcccc
Q 010013 276 SIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLS-AAEVLNHPWMRV 329 (520)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-~~~~l~~~~~~~ 329 (520)
.....+.........+....+++.+.++|.+||. +|.+||+ +.++|+||||+.
T Consensus 237 ~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~ 290 (350)
T cd05573 237 ETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKG 290 (350)
T ss_pred HHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCC
Confidence 7777777633333332334579999999999997 9999999 999999999975
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-46 Score=373.78 Aligned_cols=257 Identities=32% Similarity=0.581 Sum_probs=220.7
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 147 (520)
.|.+++.||+|+||.||+|.+..+++.+|+|++.+.........+.+.+|+.+++++. ||||+++++.+.+.+.+|+||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~-h~~iv~~~~~~~~~~~~~lv~ 80 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEAD-NEWVVRLYYSFQDKDNLYFVM 80 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCC-CCcCCeEEEEEEeCCEEEEEE
Confidence 5889999999999999999999999999999987654434445677889999999998 999999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC---
Q 010013 148 DLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG--- 224 (520)
Q Consensus 148 e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~--- 224 (520)
||++||+|.+++.+.+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..+...
T Consensus 81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl---~~~g~~kL~DFGla~~~~~~~~~ 157 (382)
T cd05625 81 DYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHDS 157 (382)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEEeECCCCccccccccc
Confidence 999999999999888889999999999999999999999999999999999999 45778999999997532100
Q ss_pred ---------------------------------------------CcccccccCCCccCchhhcc-cCCCcchhHHHHHH
Q 010013 225 ---------------------------------------------DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVI 258 (520)
Q Consensus 225 ---------------------------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~ 258 (520)
......+||+.|+|||++.+ .++.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvi 237 (382)
T cd05625 158 KYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 237 (382)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHH
Confidence 00123468999999998864 58999999999999
Q ss_pred HHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC---HHHHHcCCcccc
Q 010013 259 LYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLS---AAEVLNHPWMRV 329 (520)
Q Consensus 259 l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps---~~~~l~~~~~~~ 329 (520)
+|+|++|+.||.+....+....+.........+....+++++.++|.+|+ .+|++|++ +.++++||||+.
T Consensus 238 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~ 310 (382)
T cd05625 238 LYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKT 310 (382)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCC
Confidence 99999999999988877766666654444444444578999999999987 59999997 999999999975
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-46 Score=363.56 Aligned_cols=255 Identities=28% Similarity=0.543 Sum_probs=222.8
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 147 (520)
+|.+.+.||+|+||.||+|.++.+++.||+|++.+.........+.+..|+.++..+..|++|+++++++...+.+|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 48899999999999999999999999999999976544344456778889999999985567899999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC-CCCc
Q 010013 148 DLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDV 226 (520)
Q Consensus 148 e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~-~~~~ 226 (520)
||++|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.... ....
T Consensus 81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~---~~~~~kL~Dfg~~~~~~~~~~~ 157 (324)
T cd05587 81 EYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLD---AEGHIKIADFGMCKENIFGGKT 157 (324)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEc---CCCCEEEeecCcceecCCCCCc
Confidence 9999999999998888899999999999999999999999999999999999994 56789999999987532 2223
Q ss_pred ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHH
Q 010013 227 FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305 (520)
Q Consensus 227 ~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 305 (520)
.....||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+....+....+......++ ..++..+.+++.
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~ 233 (324)
T cd05587 158 TRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYP----KSLSKEAVSICK 233 (324)
T ss_pred eeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHH
Confidence 344679999999999865 488999999999999999999999999888888888877655443 367899999999
Q ss_pred HhcccCCCCCCCH-----HHHHcCCcccc
Q 010013 306 KMLHADPKERLSA-----AEVLNHPWMRV 329 (520)
Q Consensus 306 ~~l~~dp~~Rps~-----~~~l~~~~~~~ 329 (520)
+||..||.+|++. +++++||||..
T Consensus 234 ~~l~~~P~~R~~~~~~~~~~~~~hp~~~~ 262 (324)
T cd05587 234 GLLTKHPAKRLGCGPTGERDIREHAFFRR 262 (324)
T ss_pred HHhhcCHHHcCCCCCCCHHHHhcCCCcCC
Confidence 9999999999986 89999999975
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-46 Score=369.33 Aligned_cols=260 Identities=31% Similarity=0.516 Sum_probs=224.1
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
..++|.+.+.||+|+||.||+|.++.+++.||+|++.+.........+.+.+|+.+++.+. ||||+++++++.++..++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~-h~~iv~~~~~~~~~~~~~ 119 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHAN-SEWIVQLHYAFQDDKYLY 119 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC-CCCcceEEEEEecCCEEE
Confidence 3467999999999999999999999999999999997544433344566788999999998 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
+||||++||+|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 120 lv~Ey~~gg~L~~~l~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl---~~~~~~kL~DfG~~~~~~~~ 195 (370)
T cd05596 120 MVMEYMPGGDLVNLMSN-YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMDAN 195 (370)
T ss_pred EEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE---cCCCCEEEEeccceeeccCC
Confidence 99999999999988765 468999999999999999999999999999999999999 45778999999999876433
Q ss_pred C--cccccccCCCccCchhhcc-----cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 010013 225 D--VFKDLVGSAYYVAPEVLRR-----NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (520)
Q Consensus 225 ~--~~~~~~gt~~y~aPE~~~~-----~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (520)
. ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+......+..+....++
T Consensus 196 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s 275 (370)
T cd05596 196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEIS 275 (370)
T ss_pred CcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCC
Confidence 2 1234579999999998753 37889999999999999999999999988888888887655444333334689
Q ss_pred HHHHHHHHHhcccCCCC--CCCHHHHHcCCcccc
Q 010013 298 SSAKDIVKKMLHADPKE--RLSAAEVLNHPWMRV 329 (520)
Q Consensus 298 ~~~~~li~~~l~~dp~~--Rps~~~~l~~~~~~~ 329 (520)
..+.++|.+||..+|++ |+|+.++++||||+.
T Consensus 276 ~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~ 309 (370)
T cd05596 276 KQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKN 309 (370)
T ss_pred HHHHHHHHHHccChhhccCCCCHHHHhcCcccCC
Confidence 99999999999999988 999999999999975
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-46 Score=363.30 Aligned_cols=250 Identities=27% Similarity=0.535 Sum_probs=219.7
Q ss_pred ceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 010013 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~g 152 (520)
+.||+|+||.||+|.++.+++.||+|++.+.........+.+..|..++..+.+||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999999999999999997654444455667788999998876799999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC-CCcccccc
Q 010013 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-GDVFKDLV 231 (520)
Q Consensus 153 ~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~ 231 (520)
++|...+...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..... ........
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 157 (321)
T cd05591 81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILL---DAEGHCKLADFGMCKEGILNGVTTTTFC 157 (321)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEEeecccceecccCCccccccc
Confidence 9999999888889999999999999999999999999999999999999 4567899999999876432 22234457
Q ss_pred cCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhccc
Q 010013 232 GSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310 (520)
Q Consensus 232 gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 310 (520)
||+.|+|||++.+ .++.++|||||||++|+|++|+.||...........+......++ ..++.++.++|.+||..
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~ll~~~L~~ 233 (321)
T cd05591 158 GTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYP----VWLSKEAVSILKAFMTK 233 (321)
T ss_pred cCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhcc
Confidence 8999999999865 589999999999999999999999999998888888887665443 24689999999999999
Q ss_pred CCCCCC-------CHHHHHcCCcccc
Q 010013 311 DPKERL-------SAAEVLNHPWMRV 329 (520)
Q Consensus 311 dp~~Rp-------s~~~~l~~~~~~~ 329 (520)
||++|| ++.++++||||..
T Consensus 234 dp~~R~~~~~~~~~~~~~~~hp~~~~ 259 (321)
T cd05591 234 NPNKRLGCVASQGGEDAIKQHPFFKE 259 (321)
T ss_pred CHHHcCCCCCCCCCHHHHhcCCccCC
Confidence 999999 9999999999964
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-45 Score=356.02 Aligned_cols=254 Identities=28% Similarity=0.448 Sum_probs=210.8
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+.+.||+|+||.||+|.++.++..||+|++..... ......+.+|+.+++++. ||||+++++++......++|
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv 81 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKNLK-HANIVTLHDIIHTERCLTLV 81 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc--CCcchhHHHHHHHHHhCC-CCCEeeEEEEEcCCCeEEEE
Confidence 569999999999999999999999999999999864321 222356778999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC-
Q 010013 147 MDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG- 224 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~- 224 (520)
|||+.+ +|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 82 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~---~~~~~kl~DfG~~~~~~~~~ 157 (288)
T cd07871 82 FEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLIN---EKGELKLADFGLARAKSVPT 157 (288)
T ss_pred EeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC---CCCCEEECcCcceeeccCCC
Confidence 999975 8988886644 579999999999999999999999999999999999994 5677999999998765322
Q ss_pred CcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCC--------------
Q 010013 225 DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDF-------------- 288 (520)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-------------- 288 (520)
.......+++.|+|||++.+ .++.++||||+||++|+|++|+.||.+....+....+.......
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T cd07871 158 KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEF 237 (288)
T ss_pred ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhh
Confidence 22344578999999998753 47899999999999999999999998877666555443211100
Q ss_pred -----CC-------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 289 -----SS-------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 289 -----~~-------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
+. ...+.++.++.+||.+||..||.+|||++|+|+||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 238 RSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred hccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 00 0123567899999999999999999999999999998
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-45 Score=361.64 Aligned_cols=255 Identities=28% Similarity=0.524 Sum_probs=223.4
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 147 (520)
+|.+.+.||+|+||.||+|.++.+++.||+|++.+.........+.+..|..++..+..|++|+++++++...+.+++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 48889999999999999999999999999999976544344445667788888888877899999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC-CCc
Q 010013 148 DLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-GDV 226 (520)
Q Consensus 148 e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~-~~~ 226 (520)
||+++|+|.+.+...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..... ...
T Consensus 81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill---~~~~~~kL~DfG~~~~~~~~~~~ 157 (323)
T cd05616 81 EYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENMWDGVT 157 (323)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEE---CCCCcEEEccCCCceecCCCCCc
Confidence 999999999999888889999999999999999999999999999999999999 4567899999999876432 223
Q ss_pred ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHH
Q 010013 227 FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305 (520)
Q Consensus 227 ~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 305 (520)
.....||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.........+......++ ..++.++.+++.
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li~ 233 (323)
T cd05616 158 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP----KSMSKEAVAICK 233 (323)
T ss_pred cccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----CcCCHHHHHHHH
Confidence 345679999999999864 589999999999999999999999999888888888887665544 357899999999
Q ss_pred HhcccCCCCCCCH-----HHHHcCCcccc
Q 010013 306 KMLHADPKERLSA-----AEVLNHPWMRV 329 (520)
Q Consensus 306 ~~l~~dp~~Rps~-----~~~l~~~~~~~ 329 (520)
+||+.+|++|+++ .++++||||..
T Consensus 234 ~~l~~~p~~R~~~~~~~~~~i~~h~~~~~ 262 (323)
T cd05616 234 GLMTKHPGKRLGCGPEGERDIKEHAFFRY 262 (323)
T ss_pred HHcccCHHhcCCCCCCCHHHHhcCCCcCC
Confidence 9999999999984 89999999974
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-45 Score=367.29 Aligned_cols=262 Identities=29% Similarity=0.502 Sum_probs=222.2
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
...++|.+.+.||+|+||.||++.++.+++.+|+|++.+.........+.+.+|+.+++.+. ||||+++++++.++..+
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~-hp~iv~~~~~~~~~~~~ 118 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN-SPWVVQLFCAFQDDKYL 118 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCEE
Confidence 34578999999999999999999999999999999987544433344566889999999998 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
|+||||++||+|.+++... .+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.....
T Consensus 119 ~lv~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl---~~~~~~kL~DFG~a~~~~~ 194 (370)
T cd05621 119 YMVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLL---DKHGHLKLADFGTCMKMDE 194 (370)
T ss_pred EEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE---CCCCCEEEEecccceeccc
Confidence 9999999999999988654 68999999999999999999999999999999999999 4567899999999987643
Q ss_pred CCc--ccccccCCCccCchhhcc-----cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCC
Q 010013 224 GDV--FKDLVGSAYYVAPEVLRR-----NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (520)
Q Consensus 224 ~~~--~~~~~gt~~y~aPE~~~~-----~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (520)
... .....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+......+..+....+
T Consensus 195 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~ 274 (370)
T cd05621 195 TGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEI 274 (370)
T ss_pred CCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccC
Confidence 321 235679999999999853 2778999999999999999999999998887777777765443333333467
Q ss_pred CHHHHHHHHHhcccCCCC--CCCHHHHHcCCccccC
Q 010013 297 SSSAKDIVKKMLHADPKE--RLSAAEVLNHPWMRVD 330 (520)
Q Consensus 297 ~~~~~~li~~~l~~dp~~--Rps~~~~l~~~~~~~~ 330 (520)
+..+++++.+||..++.+ |+|+.++++||||+..
T Consensus 275 s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~ 310 (370)
T cd05621 275 SKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND 310 (370)
T ss_pred CHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence 899999999999855543 8899999999999753
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-45 Score=362.28 Aligned_cols=250 Identities=28% Similarity=0.562 Sum_probs=213.0
Q ss_pred ceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 010013 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~g 152 (520)
+.||+|+||.||+|.+..+++.||+|++.+.........+.+.+|..++.++.+||||+++++++.+...+|+||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999999999999999997655444455677889999999996799999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc-CCCCcccccc
Q 010013 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF-KPGDVFKDLV 231 (520)
Q Consensus 153 ~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~-~~~~~~~~~~ 231 (520)
++|.+++.+.+++++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++... ..........
T Consensus 81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~---~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 157 (329)
T cd05588 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLD---AEGHIKLTDYGMCKEGIRPGDTTSTFC 157 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC---CCCCEEECcCccccccccCCCcccccc
Confidence 99999998888999999999999999999999999999999999999994 5678999999998753 2233344567
Q ss_pred cCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCC---------HHHHHHHHHcCCCCCCCCCCCCCCHHHH
Q 010013 232 GSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGET---------EQSIFDAILRGHIDFSSDPWPNISSSAK 301 (520)
Q Consensus 232 gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (520)
||+.|+|||++.+ .++.++|||||||++|+|++|+.||.... .......+......++ ..++..+.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----~~~~~~~~ 233 (329)
T cd05588 158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIP----RSLSVKAS 233 (329)
T ss_pred CCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCC----CCCCHHHH
Confidence 9999999999865 58899999999999999999999995321 1223444444444333 35789999
Q ss_pred HHHHHhcccCCCCCCC------HHHHHcCCcccc
Q 010013 302 DIVKKMLHADPKERLS------AAEVLNHPWMRV 329 (520)
Q Consensus 302 ~li~~~l~~dp~~Rps------~~~~l~~~~~~~ 329 (520)
++|.+||+.||.+|+| +.++++||||..
T Consensus 234 ~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~ 267 (329)
T cd05588 234 SVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRN 267 (329)
T ss_pred HHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence 9999999999999997 789999999964
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-46 Score=353.33 Aligned_cols=261 Identities=36% Similarity=0.622 Sum_probs=238.2
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
.+.+-|.+.+.||+|-|+.|-+|+|.-||..||||++.+..+... .-..+.+|++.|+-++ |||||+||++......+
T Consensus 15 kIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~-st~hlfqEVRCMKLVQ-HpNiVRLYEViDTQTKl 92 (864)
T KOG4717|consen 15 KIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTL-STGHLFQEVRCMKLVQ-HPNIVRLYEVIDTQTKL 92 (864)
T ss_pred ceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchh-hhhHHHHHHHHHHHhc-CcCeeeeeehhcccceE
Confidence 466789999999999999999999999999999999988776433 3355778999998888 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 144 NLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
|+|+|+-.+|+|++++.+. ..+.+..+.+++.||+.|+.|+|+..+|||||||+|+.+. ..-+.+||.|||++..+.
T Consensus 93 yLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFF--EKlGlVKLTDFGFSNkf~ 170 (864)
T KOG4717|consen 93 YLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFF--EKLGLVKLTDFGFSNKFQ 170 (864)
T ss_pred EEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEe--eecCceEeeeccccccCC
Confidence 9999999999999999875 4699999999999999999999999999999999999886 467889999999999999
Q ss_pred CCCcccccccCCCccCchhhccc-C-CCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHH
Q 010013 223 PGDVFKDLVGSAYYVAPEVLRRN-Y-GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300 (520)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~~~-~-~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (520)
++......+|+..|.|||++-+. | .+++||||||||||.|++|++||...++.+.+-.|+...+..+. .++.++
T Consensus 171 PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPs----hvS~eC 246 (864)
T KOG4717|consen 171 PGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPS----HVSKEC 246 (864)
T ss_pred CcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCch----hhhHHH
Confidence 99999999999999999998654 5 47899999999999999999999999999999999998887764 678999
Q ss_pred HHHHHHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 301 ~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
++||..||..||.+|.|.++|..++|++....
T Consensus 247 rdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~ 278 (864)
T KOG4717|consen 247 RDLIQSMLVRDPKKRASLEEIVSTSWLQAGDR 278 (864)
T ss_pred HHHHHHHHhcCchhhccHHHHhccccccCCCC
Confidence 99999999999999999999999999986443
|
|
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-45 Score=355.68 Aligned_cols=256 Identities=30% Similarity=0.490 Sum_probs=211.4
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+.+.||+|+||.||+|+++.+++.+|+|++..... .....+.+.+|+.+++++. ||||+++++++...+.+++|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 78 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEE-NEEVKETTLRELKMLRTLK-QENIVELKEAFRRRGKLYLV 78 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccc-cccchhhHHHHHHHHHhCC-CccccchhhhEecCCEEEEE
Confidence 369999999999999999999999999999999865432 2334567889999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC-
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~- 225 (520)
|||++++.+..+......+++..+..++.||+.||.|||+.||+||||||+||+++ .++.+||+|||++.......
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~---~~~~~kl~Dfg~~~~~~~~~~ 155 (287)
T cd07848 79 FEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLIS---HNDVLKLCDFGFARNLSEGSN 155 (287)
T ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCcEEEeeccCccccccccc
Confidence 99999877765554556799999999999999999999999999999999999994 56789999999998764322
Q ss_pred -cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCC----------------
Q 010013 226 -VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID---------------- 287 (520)
Q Consensus 226 -~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~---------------- 287 (520)
......|++.|+|||++.+ .++.++|||||||++|+|++|++||.+.+..+....+.....+
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
T cd07848 156 ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFH 235 (287)
T ss_pred ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhc
Confidence 2234578999999998864 5889999999999999999999999887654443333221100
Q ss_pred ---CCC---------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 288 ---FSS---------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 288 ---~~~---------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
++. .....++..+.+||.+||+.||++|||++++|+||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 236 GLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred ccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 000 0012367889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-46 Score=364.11 Aligned_cols=249 Identities=32% Similarity=0.594 Sum_probs=218.2
Q ss_pred ceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 010013 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~g 152 (520)
+.||+|+||.||++.+..+++.||+|++.+...........+..|++++..+. ||||+++++++...+.+++||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~-hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR-HPFLTALKYSFQTHDRLCFVMEYANG 79 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999999999999999997654444445567788999999998 99999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeecCCCCcEEeecCCCCCCeeEeecccccccC-CCCccccc
Q 010013 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDL 230 (520)
Q Consensus 153 ~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~~ 230 (520)
++|..++...+.+++..+..++.||+.||.|||+ .||+||||||+|||+ +.++.+||+|||++.... ........
T Consensus 80 ~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll---~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 156 (325)
T cd05594 80 GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTF 156 (325)
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEE---CCCCCEEEecCCCCeecCCCCcccccc
Confidence 9999999888889999999999999999999997 799999999999999 456789999999987543 22233446
Q ss_pred ccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcc
Q 010013 231 VGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309 (520)
Q Consensus 231 ~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 309 (520)
.||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+......++ ..+++++.++|.+||.
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~li~~~L~ 232 (325)
T cd05594 157 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP----RTLSPEAKSLLSGLLK 232 (325)
T ss_pred cCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHHHHHHHhh
Confidence 79999999999864 589999999999999999999999998888777777766655443 3578999999999999
Q ss_pred cCCCCCC-----CHHHHHcCCcccc
Q 010013 310 ADPKERL-----SAAEVLNHPWMRV 329 (520)
Q Consensus 310 ~dp~~Rp-----s~~~~l~~~~~~~ 329 (520)
.||++|+ ++.++++||||..
T Consensus 233 ~dP~~R~~~~~~~~~~il~h~~~~~ 257 (325)
T cd05594 233 KDPKQRLGGGPDDAKEIMQHKFFAG 257 (325)
T ss_pred cCHHHhCCCCCCCHHHHhcCCCcCC
Confidence 9999997 9999999999975
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-45 Score=359.35 Aligned_cols=250 Identities=28% Similarity=0.527 Sum_probs=215.6
Q ss_pred ceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 010013 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~g 152 (520)
+.||+|+||.||+|.++.+|..||+|++.+.........+.+..|..++..+..||||+++++++.+.+.+|+||||+.|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 47999999999999999999999999997644333344566778888888775699999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC-CCcccccc
Q 010013 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-GDVFKDLV 231 (520)
Q Consensus 153 ~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~ 231 (520)
++|..++...+.+++..+..++.||+.||.|||++||+||||||+|||++ .++.++|+|||++..... ........
T Consensus 81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (316)
T cd05620 81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLD---RDGHIKIADFGMCKENVFGDNRASTFC 157 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC---CCCCEEeCccCCCeecccCCCceeccC
Confidence 99999998888899999999999999999999999999999999999994 567899999999875322 22334567
Q ss_pred cCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhccc
Q 010013 232 GSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310 (520)
Q Consensus 232 gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 310 (520)
||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+......++ ..++.+++++|.+||+.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~ 233 (316)
T cd05620 158 GTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYP----RWITKESKDILEKLFER 233 (316)
T ss_pred CCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----CCCCHHHHHHHHHHccC
Confidence 9999999999864 588999999999999999999999999888887777766544333 24789999999999999
Q ss_pred CCCCCCCH-HHHHcCCcccc
Q 010013 311 DPKERLSA-AEVLNHPWMRV 329 (520)
Q Consensus 311 dp~~Rps~-~~~l~~~~~~~ 329 (520)
||++||++ +++++||||..
T Consensus 234 dP~~R~~~~~~~~~h~~f~~ 253 (316)
T cd05620 234 DPTRRLGVVGNIRGHPFFKT 253 (316)
T ss_pred CHHHcCCChHHHHcCCCcCC
Confidence 99999998 58889999975
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-45 Score=325.24 Aligned_cols=258 Identities=25% Similarity=0.381 Sum_probs=221.4
Q ss_pred eeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 010013 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMD 148 (520)
Q Consensus 69 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e 148 (520)
..++..||+|+.|.||+++++.+|..+|||.+... .+.+..+++...+.++.....+|+||+-+|+|..+..++|.||
T Consensus 94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt--~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMe 171 (391)
T KOG0983|consen 94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRT--GNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICME 171 (391)
T ss_pred hhhHHhhcCCCccceEEEEEcccceEEEEEeeccc--CCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHH
Confidence 44567799999999999999999999999998654 3566778899999999888789999999999999999999999
Q ss_pred ccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCc
Q 010013 149 LCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226 (520)
Q Consensus 149 ~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~-~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 226 (520)
.+. ..+..++.+ ++++++..+-++...+++||.||.+ +||+|||+||+|||+ ++.+++||||||++-++..+..
T Consensus 172 lMs-~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILl---De~GniKlCDFGIsGrlvdSkA 247 (391)
T KOG0983|consen 172 LMS-TCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL---DERGNIKLCDFGISGRLVDSKA 247 (391)
T ss_pred HHH-HHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEE---ccCCCEEeecccccceeecccc
Confidence 883 344444443 4679999999999999999999985 589999999999999 6788999999999999888887
Q ss_pred ccccccCCCccCchhhc----ccCCCcchhHHHHHHHHHHhhCCCCCCCC-CHHHHHHHHHcCCCCCCCCCCCCCCHHHH
Q 010013 227 FKDLVGSAYYVAPEVLR----RNYGAEADIWSAGVILYILLSGVPPFWGE-TEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (520)
Q Consensus 227 ~~~~~gt~~y~aPE~~~----~~~~~~~Dv~slG~~l~~ll~g~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (520)
.+...|.+.|||||.+. ..|+.++||||||++++||.||+.||.+. .+-+.+..+.+...+ ....-..+++.++
T Consensus 248 htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP-~L~~~~gFSp~F~ 326 (391)
T KOG0983|consen 248 HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPP-LLPGHMGFSPDFQ 326 (391)
T ss_pred cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCC-CCCcccCcCHHHH
Confidence 78889999999999885 34889999999999999999999999884 456677777764442 2223345899999
Q ss_pred HHHHHhcccCCCCCCCHHHHHcCCccccCCCC
Q 010013 302 DIVKKMLHADPKERLSAAEVLNHPWMRVDGDA 333 (520)
Q Consensus 302 ~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~~ 333 (520)
+|+..||..|+.+||...++|+|||+......
T Consensus 327 ~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye~a 358 (391)
T KOG0983|consen 327 SFVKDCLTKDHRKRPKYNKLLEHPFIKRYETA 358 (391)
T ss_pred HHHHHHhhcCcccCcchHHHhcCcceeecchh
Confidence 99999999999999999999999999876543
|
|
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-46 Score=365.19 Aligned_cols=258 Identities=30% Similarity=0.497 Sum_probs=222.7
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+.+.||+|+||.||+|.++.+++.||+|++...........+.+.+|+.+++.+. ||||+++++++.+.+..++|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~-~~~i~~~~~~~~~~~~~~lv 79 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISN-SPWIPQLQYAFQDKDNLYLV 79 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCCcceeeEEecCCeEEEE
Confidence 36899999999999999999999999999999997654434445677889999999987 99999999999999999999
Q ss_pred EeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 147 MDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
|||++|++|.+++.+. +.+++..+..++.||+.||.|||+.||+||||||+|||+ +.++.+||+|||++.......
T Consensus 80 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll---~~~~~~kL~Dfg~a~~~~~~~ 156 (330)
T cd05601 80 MEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLI---DRTGHIKLADFGSAARLTANK 156 (330)
T ss_pred ECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEE---CCCCCEEeccCCCCeECCCCC
Confidence 9999999999999876 679999999999999999999999999999999999999 457789999999998765433
Q ss_pred cc--cccccCCCccCchhhc-------ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCC
Q 010013 226 VF--KDLVGSAYYVAPEVLR-------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (520)
Q Consensus 226 ~~--~~~~gt~~y~aPE~~~-------~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (520)
.. ....||+.|+|||++. ..++.++|||||||++|+|++|..||...........+.........+..+.+
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 236 (330)
T cd05601 157 MVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKV 236 (330)
T ss_pred ceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCC
Confidence 22 2346899999999875 24678999999999999999999999988877777777665433322233468
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHHcCCcccc
Q 010013 297 SSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 297 ~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
+..+.+||.+||. +|.+|||+.++++||||..
T Consensus 237 ~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~ 268 (330)
T cd05601 237 SSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSK 268 (330)
T ss_pred CHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCC
Confidence 8999999999998 9999999999999999975
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-45 Score=359.60 Aligned_cols=250 Identities=30% Similarity=0.572 Sum_probs=218.9
Q ss_pred ceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 010013 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~g 152 (520)
+.||+|+||.||+|.++.+++.||+|++.+.........+.+..|..++..+..||||+++++++...+.+++||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999999999999999997654444445677788999999886699999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC-CCcccccc
Q 010013 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-GDVFKDLV 231 (520)
Q Consensus 153 ~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~ 231 (520)
++|..++.+.+.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++..... ........
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (318)
T cd05570 81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLL---DSEGHIKIADFGMCKEGILGGVTTSTFC 157 (318)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEE---CCCCcEEecccCCCeecCcCCCccccee
Confidence 9999999888899999999999999999999999999999999999999 4567899999999875322 22233457
Q ss_pred cCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhccc
Q 010013 232 GSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310 (520)
Q Consensus 232 gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 310 (520)
|++.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+......++ ..++..+.++|.+||..
T Consensus 158 g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~l~~ 233 (318)
T cd05570 158 GTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYP----RWLSKEAKSILKSFLTK 233 (318)
T ss_pred cCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC----CcCCHHHHHHHHHHccC
Confidence 8999999999864 588999999999999999999999998888887777776655433 35789999999999999
Q ss_pred CCCCCCCH-----HHHHcCCcccc
Q 010013 311 DPKERLSA-----AEVLNHPWMRV 329 (520)
Q Consensus 311 dp~~Rps~-----~~~l~~~~~~~ 329 (520)
||++|||+ .++++||||..
T Consensus 234 dP~~R~s~~~~~~~~ll~~~~~~~ 257 (318)
T cd05570 234 NPEKRLGCLPTGEQDIKGHPFFRE 257 (318)
T ss_pred CHHHcCCCCCCCHHHHhcCCCcCC
Confidence 99999999 99999999975
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-45 Score=367.48 Aligned_cols=259 Identities=30% Similarity=0.541 Sum_probs=221.2
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
+.|.+.+.||+|+||.||+|.++.+++.||+|++.............+.+|+.++..+. ||+|+++++.+.+.+.+|+|
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~iv~~~~~~~~~~~~~lv 79 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEAD-GAWVVKMFYSFQDKRNLYLI 79 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCEEEEE
Confidence 36889999999999999999999999999999997654444455677889999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC-
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~- 225 (520)
|||++||+|.+++.+.+.+++..+..++.|++.||.|||++||+||||||+|||+ +.++.++|+|||++.......
T Consensus 80 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli---~~~~~vkL~DfG~~~~~~~~~~ 156 (360)
T cd05627 80 MEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLL---DAKGHVKLSDFGLCTGLKKAHR 156 (360)
T ss_pred EeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEE---CCCCCEEEeeccCCcccccccc
Confidence 9999999999999888899999999999999999999999999999999999999 457789999999987542110
Q ss_pred -----------------------------------cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCC
Q 010013 226 -----------------------------------VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPF 269 (520)
Q Consensus 226 -----------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf 269 (520)
.....+||+.|+|||++.+ .++.++|||||||++|+|++|..||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf 236 (360)
T cd05627 157 TEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF 236 (360)
T ss_pred cccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCC
Confidence 0113479999999999864 5899999999999999999999999
Q ss_pred CCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC---CHHHHHcCCccccC
Q 010013 270 WGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERL---SAAEVLNHPWMRVD 330 (520)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp---s~~~~l~~~~~~~~ 330 (520)
.+.........+.........+....+++.++++|.+|+. +|.+|+ ++.++++||||...
T Consensus 237 ~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~~ 299 (360)
T cd05627 237 CSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFFEGV 299 (360)
T ss_pred CCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCCC
Confidence 9988888777776543322222223578999999999874 999998 58999999999853
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-45 Score=358.49 Aligned_cols=250 Identities=32% Similarity=0.573 Sum_probs=215.1
Q ss_pred ceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 010013 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~g 152 (520)
+.||+|+||.||+|.+..+++.||+|++...........+.+..|..++..+..||||+++++++...+.+++||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999999999999999997654333444566677778887765699999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC-Ccccccc
Q 010013 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG-DVFKDLV 231 (520)
Q Consensus 153 ~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~ 231 (520)
++|..++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++...... .......
T Consensus 81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill---~~~~~~kL~Dfg~a~~~~~~~~~~~~~~ 157 (316)
T cd05592 81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLL---DKDGHIKIADFGMCKENMNGEGKASTFC 157 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEE---CCCCCEEEccCcCCeECCCCCCcccccc
Confidence 9999999888889999999999999999999999999999999999999 45678999999999865322 2334567
Q ss_pred cCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhccc
Q 010013 232 GSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310 (520)
Q Consensus 232 gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 310 (520)
||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+......++ ..++.++.++|.+||..
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~ll~~~l~~ 233 (316)
T cd05592 158 GTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFP----RWISKEAKDCLSKLFER 233 (316)
T ss_pred CCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHccC
Confidence 9999999999865 488999999999999999999999999888887777765544332 35789999999999999
Q ss_pred CCCCCCCH-HHHHcCCcccc
Q 010013 311 DPKERLSA-AEVLNHPWMRV 329 (520)
Q Consensus 311 dp~~Rps~-~~~l~~~~~~~ 329 (520)
+|++||++ .++++||||..
T Consensus 234 ~P~~R~~~~~~l~~h~~~~~ 253 (316)
T cd05592 234 DPTKRLGVDGDIRQHPFFRG 253 (316)
T ss_pred CHHHcCCChHHHHcCcccCC
Confidence 99999986 48889999974
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-46 Score=357.74 Aligned_cols=261 Identities=33% Similarity=0.620 Sum_probs=234.1
Q ss_pred cccceee--cceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 010013 65 VRNTYIF--GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (520)
Q Consensus 65 ~~~~y~~--~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~ 142 (520)
+..-|.| .+.||+|.||+||-|.++.+|+.||||+|.+..+..+ ....+++|+.||+++. ||.||.+.-.|+..+.
T Consensus 560 ~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~k-qesqlR~EVaILq~l~-HPGiV~le~M~ET~er 637 (888)
T KOG4236|consen 560 ISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTK-QESQLRNEVAILQNLH-HPGIVNLECMFETPER 637 (888)
T ss_pred HHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCc-hHHHHHHHHHHHHhcC-CCCeeEEEEeecCCce
Confidence 4445665 3689999999999999999999999999998777544 4488999999999998 9999999999999999
Q ss_pred EEEEEeccCCCchHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccc
Q 010013 143 VNLIMDLCAGGELFDRII--AKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~--~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 220 (520)
+++|||.+.| ++.+.+. +++++++.....++.||+.||.|||-+||+|+||||+|||+.+.+.-..+||||||+|+.
T Consensus 638 vFVVMEKl~G-DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARi 716 (888)
T KOG4236|consen 638 VFVVMEKLHG-DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARI 716 (888)
T ss_pred EEEEehhhcc-hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceee
Confidence 9999999966 5555443 467899999999999999999999999999999999999999887778899999999999
Q ss_pred cCCCCcccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHH
Q 010013 221 FKPGDVFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (520)
Q Consensus 221 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (520)
+....-....+|||.|+|||++. +.|.+.-|+||.||++|--++|..||.. ++++-++|.+..+-++..+|..++.+
T Consensus 717 IgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNE--dEdIndQIQNAaFMyPp~PW~eis~~ 794 (888)
T KOG4236|consen 717 IGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNE--DEDINDQIQNAAFMYPPNPWSEISPE 794 (888)
T ss_pred cchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCC--ccchhHHhhccccccCCCchhhcCHH
Confidence 88766667789999999999986 5699999999999999999999999954 45677888888999999999999999
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 300 AKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 300 ~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
+.+||..+|++.-.+|.|+++.|.|||++..
T Consensus 795 AidlIn~LLqVkm~kRysvdk~lsh~Wlq~y 825 (888)
T KOG4236|consen 795 AIDLINNLLQVKMRKRYSVDKSLSHPWLQDY 825 (888)
T ss_pred HHHHHHHHHHHHHHHhcchHhhccchhhhcc
Confidence 9999999999999999999999999999854
|
|
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-45 Score=358.55 Aligned_cols=252 Identities=31% Similarity=0.548 Sum_probs=216.8
Q ss_pred eeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHH---hccCCCCeeEEEEEEEeCCeEEE
Q 010013 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH---HLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 69 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~---~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
|.+.+.||+|+||.||+|.+..+++.||||++.+.........+.+.+|++++. ++. ||||+++++++...+..|+
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~-hp~i~~~~~~~~~~~~~~l 79 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSER-HPFLVNLFACFQTEDHVCF 79 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccC-CCChhceeeEEEcCCEEEE
Confidence 678899999999999999999999999999997654334445567777777664 444 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC-C
Q 010013 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-G 224 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~-~ 224 (520)
||||++|++|...+.. +.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++..... .
T Consensus 80 v~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill---~~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05589 80 VMEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLL---DTEGFVKIADFGLCKEGMGFG 155 (324)
T ss_pred EEcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEE---CCCCcEEeCcccCCccCCCCC
Confidence 9999999999887754 579999999999999999999999999999999999999 4567899999999875432 2
Q ss_pred CcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHH
Q 010013 225 DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (520)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (520)
.......|++.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+......++ ..++..+.++
T Consensus 156 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~l 231 (324)
T cd05589 156 DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYP----RFLSREAISI 231 (324)
T ss_pred CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----CCCCHHHHHH
Confidence 22345679999999999865 588999999999999999999999999888888887777655443 3578999999
Q ss_pred HHHhcccCCCCCC-----CHHHHHcCCcccc
Q 010013 304 VKKMLHADPKERL-----SAAEVLNHPWMRV 329 (520)
Q Consensus 304 i~~~l~~dp~~Rp-----s~~~~l~~~~~~~ 329 (520)
|.+||+.||++|| ++.++++||||..
T Consensus 232 i~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~ 262 (324)
T cd05589 232 MRRLLRRNPERRLGSGEKDAEDVKKQPFFRD 262 (324)
T ss_pred HHHHhhcCHhHcCCCCCCCHHHHhhCCCcCC
Confidence 9999999999999 7999999999974
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-45 Score=358.27 Aligned_cols=250 Identities=29% Similarity=0.563 Sum_probs=212.0
Q ss_pred ceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 010013 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~g 152 (520)
+.||+|+||.||+|.++.+++.+|+|++.+.........+.+..|+.++.++.+||||+++++++...+.+++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999999999999999997654444455667889999998886699999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC-CCCcccccc
Q 010013 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLV 231 (520)
Q Consensus 153 ~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~~~ 231 (520)
++|..++...+.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++.... .........
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili---~~~~~~kL~DfG~~~~~~~~~~~~~~~~ 157 (329)
T cd05618 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSTFC 157 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE---CCCCCEEEeeCCccccccCCCCcccccc
Confidence 9999999888889999999999999999999999999999999999999 456789999999987642 223334567
Q ss_pred cCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCC---------CHHHHHHHHHcCCCCCCCCCCCCCCHHHH
Q 010013 232 GSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGE---------TEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (520)
Q Consensus 232 gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (520)
||+.|+|||++.+ .++.++|||||||++|+|++|..||... ........+......++ ..++..+.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p----~~~~~~~~ 233 (329)
T cd05618 158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP----RSLSVKAA 233 (329)
T ss_pred CCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCC----CCCCHHHH
Confidence 9999999999865 4889999999999999999999999521 12223344444444333 35789999
Q ss_pred HHHHHhcccCCCCCCC------HHHHHcCCcccc
Q 010013 302 DIVKKMLHADPKERLS------AAEVLNHPWMRV 329 (520)
Q Consensus 302 ~li~~~l~~dp~~Rps------~~~~l~~~~~~~ 329 (520)
++|.+||+.||++||| +.++++||||+.
T Consensus 234 ~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~ 267 (329)
T cd05618 234 SVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 267 (329)
T ss_pred HHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence 9999999999999998 589999999964
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-45 Score=355.39 Aligned_cols=251 Identities=29% Similarity=0.506 Sum_probs=215.2
Q ss_pred ceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 010013 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~g 152 (520)
+.||+|+||.||+|.+..+++.||+|++...........+....|..++..+..||||+++++++.+.+.+++||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 47999999999999999999999999997654333334566777888888765599999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC-CCcccccc
Q 010013 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-GDVFKDLV 231 (520)
Q Consensus 153 ~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~ 231 (520)
|+|.+++.....+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..... ........
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (316)
T cd05619 81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLD---TDGHIKIADFGMCKENMLGDAKTCTFC 157 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEEC---CCCCEEEccCCcceECCCCCCceeeec
Confidence 99999998888899999999999999999999999999999999999994 567899999999875422 22234567
Q ss_pred cCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhccc
Q 010013 232 GSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310 (520)
Q Consensus 232 gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 310 (520)
||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+......++ ..++..+.++|.+||+.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~l~~ 233 (316)
T cd05619 158 GTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYP----RWLTREAKDILVKLFVR 233 (316)
T ss_pred CCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----ccCCHHHHHHHHHHhcc
Confidence 9999999999864 589999999999999999999999998888777777765543322 24788999999999999
Q ss_pred CCCCCCCHH-HHHcCCccccC
Q 010013 311 DPKERLSAA-EVLNHPWMRVD 330 (520)
Q Consensus 311 dp~~Rps~~-~~l~~~~~~~~ 330 (520)
||++||++. ++++||||...
T Consensus 234 ~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05619 234 EPERRLGVKGDIRQHPFFREI 254 (316)
T ss_pred CHhhcCCChHHHHcCcccCCC
Confidence 999999996 89999999753
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-45 Score=336.02 Aligned_cols=260 Identities=30% Similarity=0.474 Sum_probs=218.8
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCC-eeEEEEEEEeCC---
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN-IVELKGAYEDRH--- 141 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~-iv~l~~~~~~~~--- 141 (520)
...|...++||+|+||+||+|+.+.+|+.||+|++...... +-.-....+|+.+|+.|+ |+| |+.+++++...+
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~-EG~P~taiREisllk~L~-~~~~iv~L~dv~~~~~~~~ 87 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE-EGVPSTAIREISLLKRLS-HANHIVRLHDVIHTSNNHR 87 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc-cCCCchhhHHHHHHHHhC-CCcceEEEEeeeeeccccc
Confidence 34577788999999999999999999999999999754321 112245679999999999 999 999999998877
Q ss_pred ---eEEEEEeccCCCchHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEee
Q 010013 142 ---SVNLIMDLCAGGELFDRIIAKG----HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATD 214 (520)
Q Consensus 142 ---~~~lv~e~~~g~~L~~~l~~~~----~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~D 214 (520)
.+++|+||+ .-+|..++.... .++...++.++.||+.||+|||++||+||||||+|||++ ..+.+||+|
T Consensus 88 ~~~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~---~~G~lKlaD 163 (323)
T KOG0594|consen 88 GIGKLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLIS---SSGVLKLAD 163 (323)
T ss_pred ccceEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEEC---CCCcEeeec
Confidence 899999999 559999887754 578899999999999999999999999999999999995 578899999
Q ss_pred cccccccC-CCCcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCC
Q 010013 215 FGLSVFFK-PGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291 (520)
Q Consensus 215 fg~a~~~~-~~~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 291 (520)
||+|+... +...++..++|..|+|||++-+ .|+...||||+||++.||++++..|.+.++.+.+..|.+-.......
T Consensus 164 FGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~ 243 (323)
T KOG0594|consen 164 FGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEK 243 (323)
T ss_pred cchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCcc
Confidence 99999876 4445777889999999998754 49999999999999999999999999999987777775432222222
Q ss_pred CCC--------------------------CCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 292 PWP--------------------------NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 292 ~~~--------------------------~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
.|+ ..+.+..+++.+||+.+|.+|.|+..+|+||||....
T Consensus 244 ~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~ 309 (323)
T KOG0594|consen 244 DWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELP 309 (323)
T ss_pred CCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccc
Confidence 222 2345889999999999999999999999999998654
|
|
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-45 Score=355.90 Aligned_cols=255 Identities=27% Similarity=0.535 Sum_probs=222.1
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 147 (520)
+|.+.+.||+|+||.||+|.++.+++.||+|++.+.........+.+..|..++..+.+|++|+++++++...+.+|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 37788999999999999999999999999999876544344455677889999998886788999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC-c
Q 010013 148 DLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD-V 226 (520)
Q Consensus 148 e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-~ 226 (520)
||++||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++....... .
T Consensus 81 Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~---~~~~ikL~Dfg~~~~~~~~~~~ 157 (323)
T cd05615 81 EYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLD---SEGHIKIADFGMCKEHMVDGVT 157 (323)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC---CCCCEEEeccccccccCCCCcc
Confidence 9999999999998888999999999999999999999999999999999999994 56789999999987643222 2
Q ss_pred ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHH
Q 010013 227 FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305 (520)
Q Consensus 227 ~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 305 (520)
.....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+......++ ..++..+.+++.
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~li~ 233 (323)
T cd05615 158 TRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYP----KSLSKEAVSICK 233 (323)
T ss_pred ccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----ccCCHHHHHHHH
Confidence 334569999999999864 588999999999999999999999999888888888877665443 357899999999
Q ss_pred HhcccCCCCCCC-----HHHHHcCCcccc
Q 010013 306 KMLHADPKERLS-----AAEVLNHPWMRV 329 (520)
Q Consensus 306 ~~l~~dp~~Rps-----~~~~l~~~~~~~ 329 (520)
+||+.+|.+|++ ..++++||||+.
T Consensus 234 ~~l~~~p~~R~~~~~~~~~~i~~h~~f~~ 262 (323)
T cd05615 234 GLMTKHPSKRLGCGPEGERDIREHAFFRR 262 (323)
T ss_pred HHcccCHhhCCCCCCCCHHHHhcCcccCC
Confidence 999999999997 578999999975
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-45 Score=350.07 Aligned_cols=258 Identities=29% Similarity=0.497 Sum_probs=216.1
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 147 (520)
.|++.+.||+|+||.||++.+..+++.||+|++.............+.+|+.++++++ ||||+++++.+..++..++||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~ 79 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN-SRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcC-CCCEeeeeeeecCCCeEEEEE
Confidence 3788899999999999999999899999999987544333333456778999999998 999999999999999999999
Q ss_pred eccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 148 DLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 148 e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
||++|++|.+++... ..+++..+..++.|++.||.|||+.|++||||||+||++ ++++.++|+|||++.......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05605 80 TLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILL---DDYGHIRISDLGLAVEIPEGE 156 (285)
T ss_pred eccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEE---CCCCCEEEeeCCCceecCCCC
Confidence 999999999887653 458999999999999999999999999999999999999 456789999999998765444
Q ss_pred cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Q 010013 226 VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (520)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (520)
......|++.|+|||++.+ .++.++||||+||++|++++|..||.+.........+..............++..+.+++
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 236 (285)
T cd05605 157 TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSIC 236 (285)
T ss_pred ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcccCHHHHHHH
Confidence 4445678999999999864 588899999999999999999999988765443333322222222222346789999999
Q ss_pred HHhcccCCCCCC-----CHHHHHcCCcccc
Q 010013 305 KKMLHADPKERL-----SAAEVLNHPWMRV 329 (520)
Q Consensus 305 ~~~l~~dp~~Rp-----s~~~~l~~~~~~~ 329 (520)
.+||..||++|| +++++++||||..
T Consensus 237 ~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~ 266 (285)
T cd05605 237 RQLLTKDPGFRLGCRGEGAEEVKAHPFFRT 266 (285)
T ss_pred HHHccCCHHHhcCCCCCCHHHHhcCcCccC
Confidence 999999999999 8999999999974
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-45 Score=362.13 Aligned_cols=261 Identities=30% Similarity=0.496 Sum_probs=221.5
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
..++|.+.+.||+|+||.||+|.++.+++.+|+|++.+.........+.+.+|+.+++.+. ||||+++++++.++..++
T Consensus 41 ~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~-hp~iv~~~~~~~~~~~~~ 119 (371)
T cd05622 41 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN-SPWVVQLFYAFQDDRYLY 119 (371)
T ss_pred chhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCC-CCCCCeEEEEEEcCCEEE
Confidence 3478999999999999999999999999999999986544333344566788999999998 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
+||||++||+|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 120 lv~Ey~~gg~L~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~---~~~~ikL~DfG~a~~~~~~ 195 (371)
T cd05622 120 MVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD---KSGHLKLADFGTCMKMNKE 195 (371)
T ss_pred EEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEC---CCCCEEEEeCCceeEcCcC
Confidence 99999999999988765 4689999999999999999999999999999999999994 5678999999999876432
Q ss_pred C--cccccccCCCccCchhhcc-----cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 010013 225 D--VFKDLVGSAYYVAPEVLRR-----NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (520)
Q Consensus 225 ~--~~~~~~gt~~y~aPE~~~~-----~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (520)
. ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+..............++
T Consensus 196 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s 275 (371)
T cd05622 196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDIS 275 (371)
T ss_pred CcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCC
Confidence 2 1234579999999999853 27889999999999999999999999988888888887654443333345789
Q ss_pred HHHHHHHHHhcccCCCC--CCCHHHHHcCCccccC
Q 010013 298 SSAKDIVKKMLHADPKE--RLSAAEVLNHPWMRVD 330 (520)
Q Consensus 298 ~~~~~li~~~l~~dp~~--Rps~~~~l~~~~~~~~ 330 (520)
..++++|.+||..++.+ |+++.++++|+||+..
T Consensus 276 ~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~ 310 (371)
T cd05622 276 KEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 310 (371)
T ss_pred HHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence 99999999999844433 7899999999999753
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-45 Score=360.70 Aligned_cols=255 Identities=30% Similarity=0.562 Sum_probs=213.8
Q ss_pred ceeecceeeccCCeEEEEEEEc---CCCcEEEEEEecccccC-CcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHK---DTKQQFACKSISSRKLI-NRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~---~~~~~~avK~~~~~~~~-~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
.|.+.+.||+|+||.||++.+. .+++.||+|++.+.... .....+.+..|+.+++++.+||+|+++++++...+.+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 4889999999999999999874 46899999998654322 2233466889999999997799999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
++||||++||+|.+++.+.+.+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.....
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~---~~~~~kl~DfG~~~~~~~ 157 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLD---SEGHVVLTDFGLSKEFLS 157 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEEC---CCCCEEEeeCcCCccccc
Confidence 99999999999999998888899999999999999999999999999999999999994 567899999999986533
Q ss_pred CC--cccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCC----HHHHHHHHHcCCCCCCCCCCCC
Q 010013 224 GD--VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGET----EQSIFDAILRGHIDFSSDPWPN 295 (520)
Q Consensus 224 ~~--~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~----~~~~~~~~~~~~~~~~~~~~~~ 295 (520)
.. ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.... .......+......+ ...
T Consensus 158 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~----~~~ 233 (332)
T cd05614 158 EEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPF----PSF 233 (332)
T ss_pred cCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCCC----CCC
Confidence 22 2234579999999999864 37889999999999999999999996432 233444444433322 246
Q ss_pred CCHHHHHHHHHhcccCCCCCC-----CHHHHHcCCcccc
Q 010013 296 ISSSAKDIVKKMLHADPKERL-----SAAEVLNHPWMRV 329 (520)
Q Consensus 296 ~~~~~~~li~~~l~~dp~~Rp-----s~~~~l~~~~~~~ 329 (520)
++..+.+++.+||+.||++|| ++.++++||||+.
T Consensus 234 ~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~ 272 (332)
T cd05614 234 IGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKG 272 (332)
T ss_pred CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCC
Confidence 789999999999999999999 8889999999975
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-44 Score=370.05 Aligned_cols=260 Identities=23% Similarity=0.364 Sum_probs=205.2
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhcc-----CCCCeeEEEEEEE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT-----GHRNIVELKGAYE 138 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~-----~hp~iv~l~~~~~ 138 (520)
...++|.+.+.||+|+||+||+|.+..+++.||||++.... ........|+.+++.+. .|++++++++++.
T Consensus 126 ~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~ 201 (467)
T PTZ00284 126 VSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP----KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201 (467)
T ss_pred cCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch----hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence 34578999999999999999999999999999999985321 22344567888887775 2446889999887
Q ss_pred eC-CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeecCCCCcEEeecCCC----------
Q 010013 139 DR-HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAE---------- 206 (520)
Q Consensus 139 ~~-~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~ivH~Dlkp~NIll~~~~~---------- 206 (520)
.. .++++||+++ |++|.+++.+.+.+++..+..++.||+.||.|||+ .|||||||||+|||++..+.
T Consensus 202 ~~~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~ 280 (467)
T PTZ00284 202 NETGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRAL 280 (467)
T ss_pred cCCceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCccccccccccc
Confidence 64 5789999988 77999999888899999999999999999999998 59999999999999964321
Q ss_pred ---CCCeeEeecccccccCCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHH
Q 010013 207 ---DSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL 282 (520)
Q Consensus 207 ---~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~ 282 (520)
...+||+|||.+.... ......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+....+....+.
T Consensus 281 ~~~~~~vkl~DfG~~~~~~--~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~ 358 (467)
T PTZ00284 281 PPDPCRVRICDLGGCCDER--HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLME 358 (467)
T ss_pred CCCCceEEECCCCccccCc--cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence 1259999999876532 22345689999999999865 58999999999999999999999998877655444332
Q ss_pred cCCCCCCCC------------------------------------CCC--CCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 283 RGHIDFSSD------------------------------------PWP--NISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 283 ~~~~~~~~~------------------------------------~~~--~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
.....++.. .+. ..+..+.+||.+||+.||++|||++|+|+|
T Consensus 359 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~H 438 (467)
T PTZ00284 359 KTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTH 438 (467)
T ss_pred HHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcC
Confidence 211110000 000 013567899999999999999999999999
Q ss_pred CccccC
Q 010013 325 PWMRVD 330 (520)
Q Consensus 325 ~~~~~~ 330 (520)
|||...
T Consensus 439 p~~~~~ 444 (467)
T PTZ00284 439 PYVLKY 444 (467)
T ss_pred cccccc
Confidence 999864
|
|
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-44 Score=351.70 Aligned_cols=258 Identities=26% Similarity=0.427 Sum_probs=207.0
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.++|.+.+.||+|+||.||+|.++.+++.||+|++..... ......+.+|+.+++++. ||||+++++++.+....++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~l 80 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE--EGTPFTAIREASLLKGLK-HANIVLLHDIIHTKETLTL 80 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc--cccchhHHHHHHHHhhCC-CCCcCeEEEEEecCCeEEE
Confidence 4679999999999999999999999999999999864332 122345678999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC-
Q 010013 146 IMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP- 223 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~- 223 (520)
||||+. ++|.+.+... +.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.....
T Consensus 81 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~ 156 (303)
T cd07869 81 VFEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLI---SDTGELKLADFGLARAKSVP 156 (303)
T ss_pred EEECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEECCCCcceeccCC
Confidence 999995 5777777654 568999999999999999999999999999999999999 4567899999999875432
Q ss_pred CCcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCH-HHHHHHHHcCCCC-------------
Q 010013 224 GDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETE-QSIFDAILRGHID------------- 287 (520)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~-~~~~~~~~~~~~~------------- 287 (520)
........|++.|+|||++.+ .++.++|||||||++|+|++|..||.+... ......+......
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (303)
T cd07869 157 SHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLP 236 (303)
T ss_pred CccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcc
Confidence 222344578999999998753 478899999999999999999999987543 2222222110000
Q ss_pred -CCCCC------------C--CCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 288 -FSSDP------------W--PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 288 -~~~~~------------~--~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
+.... + ...+..+.+|+.+||+.||++|||+.++|+||||+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~ 294 (303)
T cd07869 237 HFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDL 294 (303)
T ss_pred ccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccC
Confidence 00000 0 1245678999999999999999999999999999753
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-44 Score=357.82 Aligned_cols=259 Identities=29% Similarity=0.467 Sum_probs=210.4
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC-----Ce
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR-----HS 142 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~-----~~ 142 (520)
+|.+.+.||+|+||.||+|.++.++..||+|.+.... ........+.+|+.++++++ ||||+++++++... ..
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~~~~ 78 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVF-EHVSDATRILREIKLLRLLR-HPDIVEIKHIMLPPSRREFKD 78 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhh-ccchhHHHHHHHHHHHHhCC-CCCEeeecceEeccCCCCCce
Confidence 5899999999999999999999999999999986422 22233456889999999998 99999999987543 35
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
+|+||||+. ++|.+.+.....+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++...
T Consensus 79 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll---~~~~~~kL~Dfg~~~~~~ 154 (338)
T cd07859 79 IYVVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILA---NADCKLKICDFGLARVAF 154 (338)
T ss_pred EEEEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCcEEEccCccccccc
Confidence 899999994 6899999888889999999999999999999999999999999999999 457789999999998643
Q ss_pred CCC----cccccccCCCccCchhhcc---cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHc------------
Q 010013 223 PGD----VFKDLVGSAYYVAPEVLRR---NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR------------ 283 (520)
Q Consensus 223 ~~~----~~~~~~gt~~y~aPE~~~~---~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~------------ 283 (520)
... ......|++.|+|||++.+ .++.++|||||||++|+|++|++||.+.........+..
T Consensus 155 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (338)
T cd07859 155 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISR 234 (338)
T ss_pred cccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence 211 1234579999999998753 588899999999999999999999987654332221110
Q ss_pred ---------------CCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 284 ---------------GHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 284 ---------------~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
.........++.+++.+.+++.+||..||++|||+.++|+||||+....
T Consensus 235 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~ 298 (338)
T cd07859 235 VRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAK 298 (338)
T ss_pred hhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCc
Confidence 0000111123467889999999999999999999999999999976544
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-45 Score=356.89 Aligned_cols=249 Identities=29% Similarity=0.583 Sum_probs=213.1
Q ss_pred ceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHH-HHHhccCCCCeeEEEEEEEeCCeEEEEEeccC
Q 010013 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQ-IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCA 151 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~-~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~ 151 (520)
+.||+|+||+||+|.++.+|+.||+|++.+...........+..|.. +++.+. ||||+++++++...+..++||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~-hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVK-HPFLVGLHYSFQTADKLYFVLDYVN 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCC-CCCCCCeeEEEEeCCEEEEEEcCCC
Confidence 46999999999999999999999999987654333333445555555 456676 9999999999999999999999999
Q ss_pred CCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC-CCccccc
Q 010013 152 GGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-GDVFKDL 230 (520)
Q Consensus 152 g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~ 230 (520)
|++|..++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..... .......
T Consensus 80 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll---~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 156 (323)
T cd05575 80 GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILL---DSQGHVVLTDFGLCKEGIEHSKTTSTF 156 (323)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEE---CCCCcEEEeccCCCcccccCCCccccc
Confidence 99999999888889999999999999999999999999999999999999 4567899999999876422 2233456
Q ss_pred ccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcc
Q 010013 231 VGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309 (520)
Q Consensus 231 ~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 309 (520)
.||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+........ +.++..+.++|.+||+
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~l~ 232 (323)
T cd05575 157 CGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLK----PNISVSARHLLEGLLQ 232 (323)
T ss_pred cCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhh
Confidence 79999999998864 588999999999999999999999999888888887776654432 4678999999999999
Q ss_pred cCCCCCCCH----HHHHcCCcccc
Q 010013 310 ADPKERLSA----AEVLNHPWMRV 329 (520)
Q Consensus 310 ~dp~~Rps~----~~~l~~~~~~~ 329 (520)
.||.+||++ .++++||||..
T Consensus 233 ~~p~~R~~~~~~~~~il~~~~~~~ 256 (323)
T cd05575 233 KDRTKRLGAKDDFLEIKNHVFFSS 256 (323)
T ss_pred cCHHhCCCCCCCHHHHHcCCCcCC
Confidence 999999988 69999999975
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-44 Score=355.67 Aligned_cols=249 Identities=34% Similarity=0.619 Sum_probs=215.7
Q ss_pred ceeeccCCeEEEEEEEc---CCCcEEEEEEecccccC-CcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 010013 73 RELGRGQFGVTYLVTHK---DTKQQFACKSISSRKLI-NRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMD 148 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~---~~~~~~avK~~~~~~~~-~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e 148 (520)
+.||+|+||.||++... .+++.||+|++...... .......+.+|+.+++.+. ||||+++++++..++.+|+|||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVK-HPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCC-CCchhceeeEEecCCeEEEEEe
Confidence 68999999999999874 46889999998754321 2233456788999999998 9999999999999999999999
Q ss_pred ccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC-Ccc
Q 010013 149 LCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG-DVF 227 (520)
Q Consensus 149 ~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~-~~~ 227 (520)
|++|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++..... ...
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~ 157 (323)
T cd05584 81 YLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILL---DAQGHVKLTDFGLCKESIHEGTVT 157 (323)
T ss_pred CCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCCEEEeeCcCCeecccCCCcc
Confidence 99999999999988889999999999999999999999999999999999999 45678999999998754322 223
Q ss_pred cccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHH
Q 010013 228 KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306 (520)
Q Consensus 228 ~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 306 (520)
....|++.|+|||++.+ .++.++|||||||++|+|++|..||...........+..+...++ +.++..+.++|.+
T Consensus 158 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~ 233 (323)
T cd05584 158 HTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLP----PYLTPEARDLLKK 233 (323)
T ss_pred cccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHH
Confidence 34579999999999864 478899999999999999999999999888888888877655443 3578999999999
Q ss_pred hcccCCCCCC-----CHHHHHcCCcccc
Q 010013 307 MLHADPKERL-----SAAEVLNHPWMRV 329 (520)
Q Consensus 307 ~l~~dp~~Rp-----s~~~~l~~~~~~~ 329 (520)
||+.+|++|| ++.++++||||..
T Consensus 234 ~l~~~p~~R~~~~~~~~~~l~~h~~~~~ 261 (323)
T cd05584 234 LLKRNPSSRLGAGPGDAAEVQSHPFFRH 261 (323)
T ss_pred HcccCHhHcCCCCCCCHHHHhcCCCcCC
Confidence 9999999999 8999999999975
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-44 Score=348.05 Aligned_cols=251 Identities=28% Similarity=0.470 Sum_probs=206.5
Q ss_pred eeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCCCc
Q 010013 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGE 154 (520)
Q Consensus 75 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~g~~ 154 (520)
||+|+||+||++.++.+++.+|+|.+...........+.+..|+.+++.+. ||||+++.+++.....+++||||++||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~g~ 79 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVH-SRFIVSLAYAFQTKTDLCLVMTIMNGGD 79 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCC-CCcEeeeeEEEcCCCeEEEEEeCCCCCC
Confidence 799999999999999999999999987654433334566788999999998 9999999999999999999999999999
Q ss_pred hHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC-cccc
Q 010013 155 LFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD-VFKD 229 (520)
Q Consensus 155 L~~~l~~----~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~ 229 (520)
|...+.. ...+++..+..++.||+.||.|||++||+||||||+||++ +.++.++|+|||++....... ....
T Consensus 80 L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~~l~dfg~~~~~~~~~~~~~~ 156 (280)
T cd05608 80 LRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLL---DNDGNVRISDLGLAVELKDGQSKTKG 156 (280)
T ss_pred HHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEeeCccceecCCCCccccc
Confidence 9887743 3468999999999999999999999999999999999999 456789999999998764432 2234
Q ss_pred cccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhc
Q 010013 230 LVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKML 308 (520)
Q Consensus 230 ~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 308 (520)
..|++.|+|||++.+ .++.++|||||||++|+|++|+.||...........+............+.++..+.+++.+||
T Consensus 157 ~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 236 (280)
T cd05608 157 YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEALL 236 (280)
T ss_pred cCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCcccCCHHHHHHHHHHh
Confidence 578999999999864 5889999999999999999999999765432211112111111111222467899999999999
Q ss_pred ccCCCCCC-----CHHHHHcCCcccc
Q 010013 309 HADPKERL-----SAAEVLNHPWMRV 329 (520)
Q Consensus 309 ~~dp~~Rp-----s~~~~l~~~~~~~ 329 (520)
+.||++|| |++++++||||+.
T Consensus 237 ~~~P~~R~~~~~~~~~~~l~h~~~~~ 262 (280)
T cd05608 237 AKDPEKRLGFRDGNCDGLRTHPLFRD 262 (280)
T ss_pred cCCHHHhcCCCCCCHHHHhcChhhhc
Confidence 99999999 8899999999975
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-44 Score=347.39 Aligned_cols=256 Identities=25% Similarity=0.404 Sum_probs=207.4
Q ss_pred cceeecceeeccCCeEEEEEEEcC-CCcEEEEEEecccccCCcccHHHHHHHHHHHHhcc--CCCCeeEEEEEEE-----
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKD-TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT--GHRNIVELKGAYE----- 138 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~--~hp~iv~l~~~~~----- 138 (520)
++|.+.+.||+|+||.||+|.+.. +++.+|+|.+..... .......+.+|+.+++.+. .||||+++++++.
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~ 79 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTG-EEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 79 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccC-CCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence 369999999999999999999854 468899998865332 2222345667888877764 3999999999875
Q ss_pred eCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecc
Q 010013 139 DRHSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (520)
Q Consensus 139 ~~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg 216 (520)
....+++||||+. ++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||
T Consensus 80 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~---~~~~~kl~Dfg 155 (290)
T cd07862 80 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVT---SSGQIKLADFG 155 (290)
T ss_pred CCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEc---CCCCEEEcccc
Confidence 3456899999996 5898888653 3589999999999999999999999999999999999994 56789999999
Q ss_pred cccccCCCCcccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCC-----
Q 010013 217 LSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSS----- 290 (520)
Q Consensus 217 ~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~----- 290 (520)
++.............|++.|+|||++. ..++.++|||||||++|+|++|.+||.+....+.+..+.........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~ 235 (290)
T cd07862 156 LARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR 235 (290)
T ss_pred ceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchh
Confidence 998765444445567899999999885 45889999999999999999999999988877666665432111000
Q ss_pred ------------------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 291 ------------------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 291 ------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
...+.++..+.+++.+||+.||++|||+.++|+||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 236 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred hhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 0123567889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-44 Score=354.05 Aligned_cols=250 Identities=28% Similarity=0.537 Sum_probs=212.6
Q ss_pred ceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 010013 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~g 152 (520)
+.||+|+||.||+|.++.+++.+|+|++.+.........+.+.+|+.++.++..||+|+.+++++.+.+.+|+||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 47999999999999999999999999997655444455677889999999997799999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC-CCCcccccc
Q 010013 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLV 231 (520)
Q Consensus 153 ~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~~~ 231 (520)
++|..++...+.+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.... ........+
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (327)
T cd05617 81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLD---ADGHIKLTDYGMCKEGLGPGDTTSTFC 157 (327)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEe---CCCCEEEeccccceeccCCCCceeccc
Confidence 99999998888899999999999999999999999999999999999994 56779999999987532 233344567
Q ss_pred cCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCC-------CHHHHHHHHHcCCCCCCCCCCCCCCHHHHHH
Q 010013 232 GSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGE-------TEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (520)
Q Consensus 232 gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (520)
||+.|+|||++.+ .++.++|||||||++|+|++|..||... ........+......++ ..++..+.++
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p----~~~~~~~~~l 233 (327)
T cd05617 158 GTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIP----RFLSVKASHV 233 (327)
T ss_pred CCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCC----CCCCHHHHHH
Confidence 9999999999864 5889999999999999999999999542 12233444444333322 3578999999
Q ss_pred HHHhcccCCCCCCC------HHHHHcCCcccc
Q 010013 304 VKKMLHADPKERLS------AAEVLNHPWMRV 329 (520)
Q Consensus 304 i~~~l~~dp~~Rps------~~~~l~~~~~~~ 329 (520)
+.+||..||++|++ +.++++||||..
T Consensus 234 i~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~ 265 (327)
T cd05617 234 LKGFLNKDPKERLGCQPQTGFSDIKSHTFFRS 265 (327)
T ss_pred HHHHhccCHHHcCCCCCCCCHHHHHcCCCCCC
Confidence 99999999999998 579999999975
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-45 Score=338.06 Aligned_cols=258 Identities=31% Similarity=0.503 Sum_probs=215.2
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--C-
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--H- 141 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~--~- 141 (520)
..-.|.-.+.+|+|+||.||+|....+++.+|||+.-.+.. .-.+|+++|+.+. |||||++.-+|... .
T Consensus 22 ~~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r-------~knrEl~im~~l~-HpNIV~L~~~f~~~~~~d 93 (364)
T KOG0658|consen 22 VEISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR-------YKNRELQIMRKLD-HPNIVRLLYFFSSSTESD 93 (364)
T ss_pred eEEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC-------cCcHHHHHHHhcC-CcCeeeEEEEEEecCCCc
Confidence 44458888999999999999999999999999998754432 2247999999988 99999998877532 2
Q ss_pred --eEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeec
Q 010013 142 --SVNLIMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDF 215 (520)
Q Consensus 142 --~~~lv~e~~~g~~L~~~l~~----~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Df 215 (520)
+..+||||++. +|...+.. +.+++.-.++-+..||+.||.|||+.||+||||||+|+|++ .+.+.+|||||
T Consensus 94 ~~~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD--~~tg~LKicDF 170 (364)
T KOG0658|consen 94 EVYLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVD--PDTGVLKICDF 170 (364)
T ss_pred hhHHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEc--CCCCeEEeccC
Confidence 45689999965 89888874 56799999999999999999999999999999999999997 45789999999
Q ss_pred ccccccCCCCcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCC--------
Q 010013 216 GLSVFFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH-------- 285 (520)
Q Consensus 216 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~-------- 285 (520)
|.|+.+..++......-|..|+|||.+-+ .|+.+.||||.||++.||+-|++.|.|.+..+.+..|.+--
T Consensus 171 GSAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I 250 (364)
T KOG0658|consen 171 GSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDI 250 (364)
T ss_pred CcceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 99999988877777788999999998754 59999999999999999999999999988876666653210
Q ss_pred ------------CCCCCCC-----CCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCCC
Q 010013 286 ------------IDFSSDP-----WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDA 333 (520)
Q Consensus 286 ------------~~~~~~~-----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~~ 333 (520)
..+.... ...+++++.+|+.++|..+|++|.++.|+|.||||......
T Consensus 251 ~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 251 KSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP 315 (364)
T ss_pred hhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence 1111111 23578999999999999999999999999999999754443
|
|
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-44 Score=352.49 Aligned_cols=259 Identities=25% Similarity=0.366 Sum_probs=216.2
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.++|.+.+.||+|+||.||++.++.++..+|+|++.... .....+.+.+|++++++++ ||||+++++++...+..++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~l 80 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECN-SPYIVGFYGAFYSDGEISI 80 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCC-CCCCCeEEEEEEECCEEEE
Confidence 467999999999999999999999999999999986432 2334567899999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHc-CCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM-GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
||||++|++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+|||++ .++.+||+|||++......
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg~~~~~~~~ 157 (331)
T cd06649 81 CMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVN---SRGEIKLCDFGVSGQLIDS 157 (331)
T ss_pred EeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEc---CCCcEEEccCccccccccc
Confidence 999999999999998888899999999999999999999986 699999999999994 5677999999998865432
Q ss_pred CcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC-----------------
Q 010013 225 DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI----------------- 286 (520)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~----------------- 286 (520)
......|++.|+|||++.+ .++.++|||||||++|+|++|+.||......+....+.....
T Consensus 158 -~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (331)
T cd06649 158 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPP 236 (331)
T ss_pred -ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccc
Confidence 2344578999999999865 488999999999999999999999976655443322211000
Q ss_pred ---------------------------CCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 287 ---------------------------DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 287 ---------------------------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
..+......++.++.+||.+||..||++|||+.++|+||||+...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 308 (331)
T cd06649 237 GRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSE 308 (331)
T ss_pred cccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhcc
Confidence 000111124678999999999999999999999999999998543
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-44 Score=353.33 Aligned_cols=259 Identities=27% Similarity=0.527 Sum_probs=217.1
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+.+.||+|+||.||++.++.+++.||+|++.+.........+.+.+|+.++..+. ||||+++++++.+++++|+|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv 79 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGD-RRWITNLHYAFQDENNLYLV 79 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCC-CCCCCceEEEEecCCeEEEE
Confidence 46999999999999999999999999999999987544333444567889999999987 99999999999999999999
Q ss_pred EeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 147 MDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
|||++|++|.+++.+ ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~ 156 (331)
T cd05597 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLL---DKNGHIRLADFGSCLRLLADG 156 (331)
T ss_pred EecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEE---CCCCCEEEEECCceeecCCCC
Confidence 999999999999976 4579999999999999999999999999999999999999 456789999999987654332
Q ss_pred c--ccccccCCCccCchhhc------ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC-CCCCCCC
Q 010013 226 V--FKDLVGSAYYVAPEVLR------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS-SDPWPNI 296 (520)
Q Consensus 226 ~--~~~~~gt~~y~aPE~~~------~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 296 (520)
. .....||+.|+|||++. +.++.++|||||||++|+|++|+.||.+....+....+......+. ......+
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 236 (331)
T cd05597 157 TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDV 236 (331)
T ss_pred CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCC
Confidence 2 12346899999999985 2367899999999999999999999998887777766655432222 1123458
Q ss_pred CHHHHHHHHHhcccCCCC--CCCHHHHHcCCcccc
Q 010013 297 SSSAKDIVKKMLHADPKE--RLSAAEVLNHPWMRV 329 (520)
Q Consensus 297 ~~~~~~li~~~l~~dp~~--Rps~~~~l~~~~~~~ 329 (520)
+..++++|.+||..++++ |+++.++++||||..
T Consensus 237 ~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~ 271 (331)
T cd05597 237 SEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEG 271 (331)
T ss_pred CHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCC
Confidence 999999999998664444 789999999999964
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-44 Score=366.17 Aligned_cols=255 Identities=27% Similarity=0.430 Sum_probs=206.8
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC----
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR---- 140 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~---- 140 (520)
...+|.+++.||+|+||.||+|.+..+++.||||++.... ....+|+.+++.++ ||||+++++++...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l~-h~niv~l~~~~~~~~~~~ 135 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-------QYKNRELLIMKNLN-HINIIFLKDYYYTECFKK 135 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHhcC-CCCCcceeeeEeeccccc
Confidence 3467999999999999999999999999999999885321 23457999999998 99999999876432
Q ss_pred ----CeEEEEEeccCCCchHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeE
Q 010013 141 ----HSVNLIMDLCAGGELFDRII----AKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKA 212 (520)
Q Consensus 141 ----~~~~lv~e~~~g~~L~~~l~----~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl 212 (520)
..+++||||+++ +|.+.+. ....+++..+..++.||+.||.|||++||+||||||+|||++. .+..+||
T Consensus 136 ~~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~--~~~~vkL 212 (440)
T PTZ00036 136 NEKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDP--NTHTLKL 212 (440)
T ss_pred CCCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcC--CCCceee
Confidence 257799999975 6766554 3457999999999999999999999999999999999999952 3346999
Q ss_pred eecccccccCCCCcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCC-----
Q 010013 213 TDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH----- 285 (520)
Q Consensus 213 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~----- 285 (520)
+|||+++............||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+....+.+..+....
T Consensus 213 ~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~ 292 (440)
T PTZ00036 213 CDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTE 292 (440)
T ss_pred eccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence 99999987765554455678999999998753 58999999999999999999999999887655554443211
Q ss_pred ------------CCCCCC--------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 286 ------------IDFSSD--------PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 286 ------------~~~~~~--------~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
..++.. .....+.++.+||.+||..||.+|||+.|+|+||||...
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~ 357 (440)
T PTZ00036 293 DQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDL 357 (440)
T ss_pred HHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhh
Confidence 011110 012357899999999999999999999999999999753
|
|
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-45 Score=358.39 Aligned_cols=249 Identities=31% Similarity=0.561 Sum_probs=214.1
Q ss_pred eeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhcc--CCCCeeEEEEEEEeCCeEEEEEeccCC
Q 010013 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT--GHRNIVELKGAYEDRHSVNLIMDLCAG 152 (520)
Q Consensus 75 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~--~hp~iv~l~~~~~~~~~~~lv~e~~~g 152 (520)
||+|+||+||+|.++.+++.||+|++.+..............|..++.++. +||||+++++++.....+|+||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999999999999999987544333333445556777776664 699999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC-CCcccccc
Q 010013 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-GDVFKDLV 231 (520)
Q Consensus 153 ~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~ 231 (520)
++|.+++.+.+.+++..+..++.||+.||.|||++||+||||||+|||++ .++.++|+|||++..... ........
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~---~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 157 (330)
T cd05586 81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLD---ATGHIALCDFGLSKANLTDNKTTNTFC 157 (330)
T ss_pred ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC---CCCCEEEecCCcCcCCCCCCCCccCcc
Confidence 99999998888999999999999999999999999999999999999994 567899999999876432 22334567
Q ss_pred cCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcc
Q 010013 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309 (520)
Q Consensus 232 gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 309 (520)
||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+..+...++. ..++..+.++|.+||.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~li~~~L~ 234 (330)
T cd05586 158 GTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPK---NVLSDEGRQFVKGLLN 234 (330)
T ss_pred CCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCC---ccCCHHHHHHHHHHcC
Confidence 9999999998853 4789999999999999999999999998888888887776655443 3578999999999999
Q ss_pred cCCCCCC----CHHHHHcCCcccc
Q 010013 310 ADPKERL----SAAEVLNHPWMRV 329 (520)
Q Consensus 310 ~dp~~Rp----s~~~~l~~~~~~~ 329 (520)
.||++|| ++.++++||||..
T Consensus 235 ~~P~~R~~~~~~~~~ll~h~~~~~ 258 (330)
T cd05586 235 RNPQHRLGAHRDAVELKEHPFFAD 258 (330)
T ss_pred CCHHHCCCCCCCHHHHhcCccccC
Confidence 9999998 7999999999974
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-44 Score=349.96 Aligned_cols=245 Identities=27% Similarity=0.467 Sum_probs=212.6
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
++.+.+++.||+|-||.||.|.+..+ ..||+|.+..... ..+.+.+|+++|++|+ |++||++++++..++.+||
T Consensus 205 r~~l~l~~~LG~G~FG~V~~g~~~~~-~~vavk~ik~~~m----~~~~f~~Ea~iMk~L~-H~~lV~l~gV~~~~~piyI 278 (468)
T KOG0197|consen 205 REELKLIRELGSGQFGEVWLGKWNGS-TKVAVKTIKEGSM----SPEAFLREAQIMKKLR-HEKLVKLYGVCTKQEPIYI 278 (468)
T ss_pred HHHHHHHHHhcCCccceEEEEEEcCC-CcccceEEecccc----ChhHHHHHHHHHHhCc-ccCeEEEEEEEecCCceEE
Confidence 34567789999999999999999764 5799999875433 2367889999999999 9999999999999889999
Q ss_pred EEeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 146 IMDLCAGGELFDRIIA--KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~--~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
||||++.|+|.++|.. ...+.....+.++.|||+|++||+++++|||||-..|||| +++..+||+|||+|+....
T Consensus 279 VtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV---~~~~~vKIsDFGLAr~~~d 355 (468)
T KOG0197|consen 279 VTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILV---DEDLVVKISDFGLARLIGD 355 (468)
T ss_pred EEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheee---ccCceEEEcccccccccCC
Confidence 9999999999999987 4569999999999999999999999999999999999999 5678999999999996544
Q ss_pred CCccccccc--CCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHH
Q 010013 224 GDVFKDLVG--SAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (520)
Q Consensus 224 ~~~~~~~~g--t~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (520)
+.......+ ...|.|||.+. +.++.++|||||||+|||++| |+.||.+.+..+.++.+.++..-..+ +.+|..
T Consensus 356 ~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P---~~CP~~ 432 (468)
T KOG0197|consen 356 DEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRP---EGCPDE 432 (468)
T ss_pred CceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCC---CCCCHH
Confidence 332222212 34699999987 569999999999999999999 99999999999999999988654433 579999
Q ss_pred HHHHHHHhcccCCCCCCCHHHHH
Q 010013 300 AKDIVKKMLHADPKERLSAAEVL 322 (520)
Q Consensus 300 ~~~li~~~l~~dp~~Rps~~~~l 322 (520)
+.+++..||+.+|++|||++.+.
T Consensus 433 vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 433 VYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred HHHHHHHHhhCCcccCCCHHHHH
Confidence 99999999999999999998654
|
|
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-44 Score=353.75 Aligned_cols=249 Identities=29% Similarity=0.566 Sum_probs=212.8
Q ss_pred ceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHH-HHhccCCCCeeEEEEEEEeCCeEEEEEeccC
Q 010013 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI-MHHLTGHRNIVELKGAYEDRHSVNLIMDLCA 151 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~-l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~ 151 (520)
+.||+|+||.||+|.++.+|+.+|+|++.+...........+..|..+ ++.+. ||||+++++++...+..++||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~-hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVK-HPFLVGLHYSFQTTEKLYFVLDFVN 79 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCC-CCCCccEEEEEecCCEEEEEEcCCC
Confidence 469999999999999999999999999876543333344555566554 55666 9999999999999999999999999
Q ss_pred CCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC-CCccccc
Q 010013 152 GGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-GDVFKDL 230 (520)
Q Consensus 152 g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~ 230 (520)
|++|..++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..... .......
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll---~~~~~~kL~DfG~~~~~~~~~~~~~~~ 156 (325)
T cd05604 80 GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILL---DSQGHVVLTDFGLCKEGIAQSDTTTTF 156 (325)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE---CCCCCEEEeecCCcccCCCCCCCcccc
Confidence 99999999888899999999999999999999999999999999999999 4567899999999875422 2233456
Q ss_pred ccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcc
Q 010013 231 VGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309 (520)
Q Consensus 231 ~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 309 (520)
.|++.|+|||++.+ .++.++|||||||++|+|++|..||......+....+........ +.++..+.++|.+||.
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ll~~ll~ 232 (325)
T cd05604 157 CGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLR----PGASLTAWSILEELLE 232 (325)
T ss_pred cCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCC----CCCCHHHHHHHHHHhc
Confidence 79999999999865 588999999999999999999999999888888777776544332 3678999999999999
Q ss_pred cCCCCCCCH----HHHHcCCcccc
Q 010013 310 ADPKERLSA----AEVLNHPWMRV 329 (520)
Q Consensus 310 ~dp~~Rps~----~~~l~~~~~~~ 329 (520)
.+|.+||++ .++++||||..
T Consensus 233 ~~p~~R~~~~~~~~~i~~h~~f~~ 256 (325)
T cd05604 233 KDRQRRLGAKEDFLEIQEHPFFES 256 (325)
T ss_pred cCHHhcCCCCCCHHHHhcCCCcCC
Confidence 999999977 59999999975
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-44 Score=357.20 Aligned_cols=253 Identities=23% Similarity=0.365 Sum_probs=205.6
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
..+|.+.+.||+|+||.||+|.+..+++.||+|... ...+.+|+.++++++ ||||+++++++......++
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~---------~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~l 160 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ---------RGGTATEAHILRAIN-HPSIIQLKGTFTYNKFTCL 160 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh---------hhhhHHHHHHHHhCC-CCCCCCEeEEEEECCeeEE
Confidence 367999999999999999999999999999999653 234678999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC-
Q 010013 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG- 224 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~- 224 (520)
|+|++. ++|..++.....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 161 v~e~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~---~~~~vkL~DFG~a~~~~~~~ 236 (391)
T PHA03212 161 ILPRYK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFIN---HPGDVCLGDFGAACFPVDIN 236 (391)
T ss_pred EEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEc---CCCCEEEEeCCccccccccc
Confidence 999994 68999888888899999999999999999999999999999999999994 5677999999999754221
Q ss_pred -CcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCC-------HHHHHHHHHcC-----------
Q 010013 225 -DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGET-------EQSIFDAILRG----------- 284 (520)
Q Consensus 225 -~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~-------~~~~~~~~~~~----------- 284 (520)
.......||+.|+|||++.+ .++.++|||||||++|+|++|..||.... ....+..+...
T Consensus 237 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~ 316 (391)
T PHA03212 237 ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPID 316 (391)
T ss_pred ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcc
Confidence 22334679999999999864 58999999999999999999998875421 11111111110
Q ss_pred ---------------CCC--CCCCCC---CCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 285 ---------------HID--FSSDPW---PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 285 ---------------~~~--~~~~~~---~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
... .....| ..++.++.+||.+||+.||++|||+.|+|+||||+....
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~~ 384 (391)
T PHA03212 317 AQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIPD 384 (391)
T ss_pred hhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCCC
Confidence 000 000011 135678999999999999999999999999999986443
|
|
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-44 Score=353.38 Aligned_cols=248 Identities=31% Similarity=0.554 Sum_probs=215.1
Q ss_pred ceeeccCCeEEEEEEEc---CCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEec
Q 010013 73 RELGRGQFGVTYLVTHK---DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDL 149 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~---~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~ 149 (520)
+.||+|+||.||++.+. .+|+.+|+|++..... .......+..|+.+++++. ||||+++++++..++..|+||||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~ 79 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATL-KVRDRVRTKMERDILAEVN-HPFIVKLHYAFQTEGKLYLILDF 79 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHhCC-CCCcccEEEEEEcCCEEEEEEcC
Confidence 67999999999999863 5789999999875432 2223456778999999998 99999999999999999999999
Q ss_pred cCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC-Cccc
Q 010013 150 CAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG-DVFK 228 (520)
Q Consensus 150 ~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~-~~~~ 228 (520)
+++++|.+++.+...+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||++...... ....
T Consensus 80 ~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kL~Dfg~~~~~~~~~~~~~ 156 (318)
T cd05582 80 LRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD---EEGHIKLTDFGLSKESIDHEKKAY 156 (318)
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEEC---CCCcEEEeeccCCcccCCCCCcee
Confidence 99999999998888899999999999999999999999999999999999994 5677999999998865433 2233
Q ss_pred ccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHh
Q 010013 229 DLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKM 307 (520)
Q Consensus 229 ~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 307 (520)
...|++.|+|||++.+ .++.++|||||||++|+|++|+.||...........+......++ ..++..+.++|.+|
T Consensus 157 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~li~~~ 232 (318)
T cd05582 157 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMP----QFLSPEAQSLLRAL 232 (318)
T ss_pred cccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHH
Confidence 4679999999999864 478899999999999999999999999888888877776655443 35789999999999
Q ss_pred cccCCCCCCC-----HHHHHcCCcccc
Q 010013 308 LHADPKERLS-----AAEVLNHPWMRV 329 (520)
Q Consensus 308 l~~dp~~Rps-----~~~~l~~~~~~~ 329 (520)
|+.||++||| +.++++||||..
T Consensus 233 l~~~P~~R~~a~~~~~~~~~~~~~~~~ 259 (318)
T cd05582 233 FKRNPANRLGAGPDGVEEIKRHPFFST 259 (318)
T ss_pred hhcCHhHcCCCCCCCHHHHhCCCCcCC
Confidence 9999999999 778999999975
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-45 Score=350.24 Aligned_cols=256 Identities=32% Similarity=0.565 Sum_probs=229.4
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe-EEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS-VNL 145 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~-~~l 145 (520)
+.|..++.+|+|+||.+++++++..++.+|+|.+....... ...+...+|+.+++++. |||||.+.+.|..++. ++|
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~-~~r~~A~~E~~lis~~~-hP~iv~y~ds~~~~~~~l~I 81 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTE-PERRSAIQEMDLLSKLL-HPNIVEYKDSFEEDGQLLCI 81 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCc-hhhHHHHHHHHHHHhcc-CCCeeeeccchhcCCceEEE
Confidence 56899999999999999999999999999999997655433 33457789999999998 9999999999988877 999
Q ss_pred EEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 146 IMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
||+||+||+|.+.+.+.+ .++++.+..|+.||+.|+.|||+++|+|||||+.||+++ .+..|||+|||+|+...+
T Consensus 82 vm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Niflt---k~~~VkLgDfGlaK~l~~ 158 (426)
T KOG0589|consen 82 VMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLT---KDKKVKLGDFGLAKILNP 158 (426)
T ss_pred EEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhcc---ccCceeecchhhhhhcCC
Confidence 999999999999997754 589999999999999999999999999999999999995 566689999999999987
Q ss_pred CC-cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHH
Q 010013 224 GD-VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (520)
Q Consensus 224 ~~-~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (520)
.. .....+|||.|++||++.+ .|+.|+|||||||.+|||++-+++|...+...+..++.++...... ...+.+++
T Consensus 159 ~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp---~~ys~el~ 235 (426)
T KOG0589|consen 159 EDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLP---SMYSSELR 235 (426)
T ss_pred chhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCC---ccccHHHH
Confidence 76 5667899999999999975 6999999999999999999999999999999999999988743322 46789999
Q ss_pred HHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 302 DIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 302 ~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
.+|..||..+|..||++.++|.+|.+...
T Consensus 236 ~lv~~~l~~~P~~RPsa~~LL~~P~l~~~ 264 (426)
T KOG0589|consen 236 SLVKSMLRKNPEHRPSALELLRRPHLLRY 264 (426)
T ss_pred HHHHHHhhcCCccCCCHHHHhhChhhhhH
Confidence 99999999999999999999999888743
|
|
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-44 Score=343.79 Aligned_cols=255 Identities=29% Similarity=0.521 Sum_probs=212.6
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 147 (520)
.|++.+.||+|+||.||++.+..+++.+|+|.+...........+.+.+|+.++++++ |++|+.+++.+.+.+..++||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-~~~i~~~~~~~~~~~~~~lv~ 79 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVN-SRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCC-CCCeeeeeEEEecCCEEEEEE
Confidence 3777899999999999999999999999999987654433334456778999999998 999999999999999999999
Q ss_pred eccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 148 DLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 148 e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
||++|++|.+.+... ..+++..+..++.|++.||.|||+.||+||||||+||+++ .++.++|+|||++.......
T Consensus 80 e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~---~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05630 80 TLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLD---DHGHIRISDLGLAVHVPEGQ 156 (285)
T ss_pred EecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEEC---CCCCEEEeeccceeecCCCc
Confidence 999999999888654 3589999999999999999999999999999999999994 56779999999998765444
Q ss_pred cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHH---HHHHHHHcCCCCCCCCCCCCCCHHHH
Q 010013 226 VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQ---SIFDAILRGHIDFSSDPWPNISSSAK 301 (520)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (520)
......|++.|+|||++.+ .++.++||||+||++|+|++|..||...... .....+... ........+++.+.
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 233 (285)
T cd05630 157 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE---VQEEYSEKFSPDAR 233 (285)
T ss_pred cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhh---hhhhcCccCCHHHH
Confidence 4445579999999999864 5889999999999999999999999865432 112222111 11122346789999
Q ss_pred HHHHHhcccCCCCCCC-----HHHHHcCCcccc
Q 010013 302 DIVKKMLHADPKERLS-----AAEVLNHPWMRV 329 (520)
Q Consensus 302 ~li~~~l~~dp~~Rps-----~~~~l~~~~~~~ 329 (520)
+|+.+||+.||++||| +.++++||||..
T Consensus 234 ~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~ 266 (285)
T cd05630 234 SLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQ 266 (285)
T ss_pred HHHHHHhhcCHHHccCCCCCchHHHHcChhhhc
Confidence 9999999999999999 999999999974
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-44 Score=351.28 Aligned_cols=249 Identities=29% Similarity=0.576 Sum_probs=211.1
Q ss_pred ceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHH-HHHhccCCCCeeEEEEEEEeCCeEEEEEeccC
Q 010013 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQ-IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCA 151 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~-~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~ 151 (520)
+.||+|+||.||+|++..+++.||+|++.+...........+..|.. +++.+. ||||+++++++...+.+|+||||++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~-h~~Iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK-HPFLVGLHFSFQTADKLYFVLDYIN 79 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCC-CCCCCceeEEEEcCCeEEEEEeCCC
Confidence 46999999999999999999999999987543322223334444444 456676 9999999999999999999999999
Q ss_pred CCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC-CCccccc
Q 010013 152 GGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-GDVFKDL 230 (520)
Q Consensus 152 g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~ 230 (520)
|++|.+.+...+.+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..... .......
T Consensus 80 ~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~---~~~~~kl~DfG~a~~~~~~~~~~~~~ 156 (325)
T cd05602 80 GGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLD---SQGHIVLTDFGLCKENIEHNGTTSTF 156 (325)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC---CCCCEEEccCCCCcccccCCCCcccc
Confidence 999999998888899999999999999999999999999999999999994 567899999999876432 2233456
Q ss_pred ccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcc
Q 010013 231 VGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309 (520)
Q Consensus 231 ~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 309 (520)
.||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+......+ .+.++..+.++|.+||+
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~li~~~l~ 232 (325)
T cd05602 157 CGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQL----KPNITNSARHLLEGLLQ 232 (325)
T ss_pred cCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCC----CCCCCHHHHHHHHHHcc
Confidence 79999999998865 48899999999999999999999999988888877776654432 24688999999999999
Q ss_pred cCCCCCCCHH----HHHcCCcccc
Q 010013 310 ADPKERLSAA----EVLNHPWMRV 329 (520)
Q Consensus 310 ~dp~~Rps~~----~~l~~~~~~~ 329 (520)
.+|.+||++. ++++|+||..
T Consensus 233 ~~p~~R~~~~~~~~~i~~~~~~~~ 256 (325)
T cd05602 233 KDRTKRLGAKDDFMEIKNHIFFSP 256 (325)
T ss_pred cCHHHCCCCCCCHHHHhcCcccCC
Confidence 9999999876 8999999964
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-44 Score=350.37 Aligned_cols=259 Identities=25% Similarity=0.502 Sum_probs=218.4
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+.+.||+|+||.||++.++.+++.||+|++.+...........+..|..++..+. |++|+++++++.+.+..|+|
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~l~~~~~~~~~~~lv 79 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGD-CQWITTLHYAFQDENYLYLV 79 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCEEEEE
Confidence 46999999999999999999999999999999986543333334556788999999887 99999999999999999999
Q ss_pred EeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 147 MDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
|||++||+|.+++.+ ...+++..+..++.|++.||.|||++||+||||||+|||++ .++.+||+|||++.......
T Consensus 80 ~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~---~~~~~kl~DfG~a~~~~~~~ 156 (331)
T cd05624 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLD---MNGHIRLADFGSCLKMNQDG 156 (331)
T ss_pred EeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEc---CCCCEEEEeccceeeccCCC
Confidence 999999999999987 46799999999999999999999999999999999999994 56779999999998764332
Q ss_pred cc--cccccCCCccCchhhcc------cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC-CCCCCCC
Q 010013 226 VF--KDLVGSAYYVAPEVLRR------NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS-SDPWPNI 296 (520)
Q Consensus 226 ~~--~~~~gt~~y~aPE~~~~------~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 296 (520)
.. ....||+.|+|||++.+ .++.++|||||||++|+|++|+.||......+....+......+. ...+..+
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~ 236 (331)
T cd05624 157 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDV 236 (331)
T ss_pred ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccC
Confidence 21 23569999999998863 478899999999999999999999998887777777765443222 1223567
Q ss_pred CHHHHHHHHHhcccCCCC--CCCHHHHHcCCcccc
Q 010013 297 SSSAKDIVKKMLHADPKE--RLSAAEVLNHPWMRV 329 (520)
Q Consensus 297 ~~~~~~li~~~l~~dp~~--Rps~~~~l~~~~~~~ 329 (520)
+..+.+++.+||..++++ |++++++++||||+.
T Consensus 237 ~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~ 271 (331)
T cd05624 237 SEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEG 271 (331)
T ss_pred CHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCC
Confidence 899999999999876554 569999999999974
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-44 Score=350.00 Aligned_cols=249 Identities=29% Similarity=0.563 Sum_probs=211.5
Q ss_pred ceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHH-HHHhccCCCCeeEEEEEEEeCCeEEEEEeccC
Q 010013 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQ-IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCA 151 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~-~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~ 151 (520)
+.||+|+||.||+|.+..+++.||+|++.+...........+..|.. +++.+. ||||+++++++.+.+..|+||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~-h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLK-HPFLVGLHYSFQTAEKLYFVLDYVN 79 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCC-CCCccceeeEEEcCCEEEEEEcCCC
Confidence 46999999999999999999999999987654333333445555554 567776 9999999999999999999999999
Q ss_pred CCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC-CCCccccc
Q 010013 152 GGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDL 230 (520)
Q Consensus 152 g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~~ 230 (520)
|++|...+.....+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++.... ........
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 156 (321)
T cd05603 80 GGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILL---DSQGHVVLTDFGLCKEGVEPEETTSTF 156 (321)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE---CCCCCEEEccCCCCccCCCCCCccccc
Confidence 99999999888889999999999999999999999999999999999999 456789999999987632 22233456
Q ss_pred ccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcc
Q 010013 231 VGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309 (520)
Q Consensus 231 ~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 309 (520)
.||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+......++ +..+..+.++|.+||+
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~l~ 232 (321)
T cd05603 157 CGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLP----GGKTVAACDLLVGLLH 232 (321)
T ss_pred cCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHHHHHHHcc
Confidence 79999999999864 588999999999999999999999999888777777776544433 3568899999999999
Q ss_pred cCCCCCCCH----HHHHcCCcccc
Q 010013 310 ADPKERLSA----AEVLNHPWMRV 329 (520)
Q Consensus 310 ~dp~~Rps~----~~~l~~~~~~~ 329 (520)
.+|.+||++ .++++|+||..
T Consensus 233 ~~p~~R~~~~~~~~~~~~~~~~~~ 256 (321)
T cd05603 233 KDQRRRLGAKADFLEIKNHVFFSP 256 (321)
T ss_pred CCHhhcCCCCCCHHHHhCCCCcCC
Confidence 999999976 59999999974
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-43 Score=349.34 Aligned_cols=259 Identities=25% Similarity=0.499 Sum_probs=217.9
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+.+.||+|+||.||++.++.+++.+|+|++.+...........+..|+.++..+. |++|+++++++.+.+.+++|
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv 79 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGD-NQWITTLHYAFQDENNLYLV 79 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCC-CCCEeeEEEEEecCCEEEEE
Confidence 36899999999999999999999999999999986543333334456888999999987 99999999999999999999
Q ss_pred EeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 147 MDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
|||+++|+|.+++.+ ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 80 ~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili---~~~~~~kL~DfG~a~~~~~~~ 156 (332)
T cd05623 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM---DMNGHIRLADFGSCLKLMEDG 156 (332)
T ss_pred EeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE---CCCCCEEEeecchheecccCC
Confidence 999999999999977 4679999999999999999999999999999999999999 456789999999987653322
Q ss_pred c--ccccccCCCccCchhhc------ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCC-CCCCCC
Q 010013 226 V--FKDLVGSAYYVAPEVLR------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSS-DPWPNI 296 (520)
Q Consensus 226 ~--~~~~~gt~~y~aPE~~~------~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 296 (520)
. .....||+.|+|||++. +.++.++|||||||++|+|++|+.||......+....+......+.. .....+
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~ 236 (332)
T cd05623 157 TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDV 236 (332)
T ss_pred cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccC
Confidence 1 22357999999999874 24788999999999999999999999998887777777665433221 123468
Q ss_pred CHHHHHHHHHhcccCCCC--CCCHHHHHcCCcccc
Q 010013 297 SSSAKDIVKKMLHADPKE--RLSAAEVLNHPWMRV 329 (520)
Q Consensus 297 ~~~~~~li~~~l~~dp~~--Rps~~~~l~~~~~~~ 329 (520)
+..+.+++.+||..++++ |+++.++++||||..
T Consensus 237 s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~ 271 (332)
T cd05623 237 SEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTG 271 (332)
T ss_pred CHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCC
Confidence 999999999999665544 689999999999975
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-43 Score=340.19 Aligned_cols=248 Identities=28% Similarity=0.507 Sum_probs=206.6
Q ss_pred eeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCCCc
Q 010013 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGE 154 (520)
Q Consensus 75 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~g~~ 154 (520)
||+|+||.||++.++.+|+.+|+|.+.............+..|+.+++++. ||||+++++++..+..+++||||++|++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~i~~~~~~~~~~~~~~lv~e~~~g~~ 79 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVN-SPFIVNLAYAFESKTHLCLVMSLMNGGD 79 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcC-CCcEEEEEEEEecCCeEEEEEecCCCCC
Confidence 799999999999999999999999987544333333445667999999997 9999999999999999999999999999
Q ss_pred hHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCccccccc
Q 010013 155 LFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVG 232 (520)
Q Consensus 155 L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~g 232 (520)
|.+++...+ .+++..+..++.||+.||.|||+.|++||||||+||+++ .++.++|+|||++.............|
T Consensus 80 L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~---~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 156 (277)
T cd05607 80 LKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLD---DQGNCRLSDLGLAVELKDGKTITQRAG 156 (277)
T ss_pred HHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEc---CCCCEEEeeceeeeecCCCceeeccCC
Confidence 998886543 488999999999999999999999999999999999994 567899999999987655444445678
Q ss_pred CCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCH----HHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHh
Q 010013 233 SAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETE----QSIFDAILRGHIDFSSDPWPNISSSAKDIVKKM 307 (520)
Q Consensus 233 t~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 307 (520)
++.|+|||++.+ .++.++|||||||++|+|++|..||..... .............. ....++.++++++.+|
T Consensus 157 ~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~ 233 (277)
T cd05607 157 TNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKF---EHQNFTEESKDICRLF 233 (277)
T ss_pred CCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccccc---ccccCCHHHHHHHHHH
Confidence 999999998864 588999999999999999999999976433 22333333322222 2246789999999999
Q ss_pred cccCCCCCCCH----HHHHcCCcccc
Q 010013 308 LHADPKERLSA----AEVLNHPWMRV 329 (520)
Q Consensus 308 l~~dp~~Rps~----~~~l~~~~~~~ 329 (520)
|+.||++||++ .++++||||+.
T Consensus 234 L~~~P~~R~~~~~~~~~~~~h~~f~~ 259 (277)
T cd05607 234 LAKKPEDRLGSREKNDDPRKHEFFKT 259 (277)
T ss_pred hccCHhhCCCCccchhhhhcChhhcC
Confidence 99999999999 67889999975
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-44 Score=352.75 Aligned_cols=260 Identities=29% Similarity=0.466 Sum_probs=217.1
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCC-----CCeeEEEEEE
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH-----RNIVELKGAY 137 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~h-----p~iv~l~~~~ 137 (520)
+.+..+|.+.+.||+|+||.|.+|.+..|++.||||+++.. +....+...|+.+|..|+.| -|||+++++|
T Consensus 182 d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~----k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F 257 (586)
T KOG0667|consen 182 DHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK----KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYF 257 (586)
T ss_pred ceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccC----hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecc
Confidence 44566899999999999999999999999999999999753 34556778899999999843 4899999999
Q ss_pred EeCCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeec
Q 010013 138 EDRHSVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDF 215 (520)
Q Consensus 138 ~~~~~~~lv~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Df 215 (520)
...++.|||+|++ ..+|.++++.++ .++...++.++.||+.||..||+.||||+||||+||||.... ...|||+||
T Consensus 258 ~fr~HlciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~-r~~vKVIDF 335 (586)
T KOG0667|consen 258 YFRNHLCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPK-RSRIKVIDF 335 (586)
T ss_pred ccccceeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCC-cCceeEEec
Confidence 9999999999999 669999998764 589999999999999999999999999999999999998644 348999999
Q ss_pred ccccccCCCCcccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC--------
Q 010013 216 GLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI-------- 286 (520)
Q Consensus 216 g~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~-------- 286 (520)
|.|...... .-..+.+..|+|||++- ..|+.+.||||||||+.||++|.+.|.+.++.+.+..|..-..
T Consensus 336 GSSc~~~q~--vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~ 413 (586)
T KOG0667|consen 336 GSSCFESQR--VYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLD 413 (586)
T ss_pred ccccccCCc--ceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 999986432 23677899999999875 5699999999999999999999999999998776666532100
Q ss_pred -------CCCC-C-------------------------------CCC------------CCCHHHHHHHHHhcccCCCCC
Q 010013 287 -------DFSS-D-------------------------------PWP------------NISSSAKDIVKKMLHADPKER 315 (520)
Q Consensus 287 -------~~~~-~-------------------------------~~~------------~~~~~~~~li~~~l~~dp~~R 315 (520)
-+.. . ..+ .-...+.++|.+||..||.+|
T Consensus 414 ~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R 493 (586)
T KOG0667|consen 414 TAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAER 493 (586)
T ss_pred hccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhc
Confidence 0000 0 000 112457899999999999999
Q ss_pred CCHHHHHcCCccccC
Q 010013 316 LSAAEVLNHPWMRVD 330 (520)
Q Consensus 316 ps~~~~l~~~~~~~~ 330 (520)
+|+.++|+||||...
T Consensus 494 ~tp~qal~Hpfl~~~ 508 (586)
T KOG0667|consen 494 ITPAQALNHPFLTGT 508 (586)
T ss_pred CCHHHHhcCcccccc
Confidence 999999999999844
|
|
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-44 Score=350.07 Aligned_cols=259 Identities=35% Similarity=0.622 Sum_probs=236.9
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
....|.+.+.||+|.|++|.+|.+..++..||||++.+... +....+.+.+|+++|+.|. |||||+++.+.+....+|
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~l-n~~~~~k~~rev~imk~l~-HPnIvkl~~v~~t~~~ly 131 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQL-NPSKRQKLGREVDIMKSLN-HPNIVKLFSVIETEATLY 131 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhccc-ChHHHHHHHHHHHHHHhcC-CcceeeeeeeeeecceeE
Confidence 34679999999999999999999999999999999987665 4445566999999999999 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
+||||+.+|.+.+++.+.+++.+..+..++.|++.|++|||+++|||||||++|||+ +.+-++||+|||++..+..+
T Consensus 132 lV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL---~~~mnikIaDfgfS~~~~~~ 208 (596)
T KOG0586|consen 132 LVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILL---DENMNIKIADFGFSTFFDYG 208 (596)
T ss_pred EEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhccc---ccccceeeeccccceeeccc
Confidence 999999999999999999999999999999999999999999999999999999999 55667999999999999888
Q ss_pred CcccccccCCCccCchhhccc--CCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHH
Q 010013 225 DVFKDLVGSAYYVAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (520)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~~--~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (520)
....+.+|++.|.|||++.+. .++++|+||+|+++|.|+.|.+||.+..-.+.......+.+..+. .++.++.+
T Consensus 209 ~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~----~ms~dce~ 284 (596)
T KOG0586|consen 209 LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPF----YMSCDCED 284 (596)
T ss_pred ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeecccc----eeechhHH
Confidence 888899999999999999753 578999999999999999999999999988888888888776655 45789999
Q ss_pred HHHHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 303 IVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 303 li~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
+|+++|-++|.+|++.+++++|.|......
T Consensus 285 lLrk~lvl~Pskr~~~dqim~~~W~n~~~~ 314 (596)
T KOG0586|consen 285 LLRKFLVLNPSKRGPCDQIMKDRWRNDLLE 314 (596)
T ss_pred HHHHhhccCccccCCHHHhhhhcccchhhh
Confidence 999999999999999999999999975443
|
|
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-43 Score=340.45 Aligned_cols=258 Identities=29% Similarity=0.504 Sum_probs=216.7
Q ss_pred eeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 010013 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMD 148 (520)
Q Consensus 69 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e 148 (520)
|+..+.||+|+||+||+|.+..+++.+|+|.+.............+.+|+.++++++ |+||+.+++.+..++..++|||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~-~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVN-SQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcC-CcCceeEEEEEecCCEEEEEEE
Confidence 677889999999999999999999999999986654433333456788999999998 9999999999999999999999
Q ss_pred ccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCc
Q 010013 149 LCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226 (520)
Q Consensus 149 ~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 226 (520)
|+++++|.+.+... ..+++..+..++.|++.||.|||+.||+||||||+||+++ .++.++|+|||++........
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~---~~~~~kl~Dfg~~~~~~~~~~ 157 (285)
T cd05632 81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLD---DYGHIRISDLGLAVKIPEGES 157 (285)
T ss_pred eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEC---CCCCEEEecCCcceecCCCCc
Confidence 99999998888653 3699999999999999999999999999999999999994 566799999999976544433
Q ss_pred ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHH
Q 010013 227 FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305 (520)
Q Consensus 227 ~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 305 (520)
.....|++.|+|||.+. ..++.++|+|||||++|+|++|..||...........+............+.++..+.+|+.
T Consensus 158 ~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 237 (285)
T cd05632 158 IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICK 237 (285)
T ss_pred ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHH
Confidence 44567899999999885 45889999999999999999999999887665444444332222222233567899999999
Q ss_pred HhcccCCCCCCC-----HHHHHcCCccccC
Q 010013 306 KMLHADPKERLS-----AAEVLNHPWMRVD 330 (520)
Q Consensus 306 ~~l~~dp~~Rps-----~~~~l~~~~~~~~ 330 (520)
+||+.||++||| +.++++|+||...
T Consensus 238 ~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05632 238 MLLTKDPKQRLGCQEEGAGEVKRHPFFRNM 267 (285)
T ss_pred HHccCCHhHcCCCcccChHHHHcChhhhcC
Confidence 999999999999 8999999999754
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-43 Score=340.72 Aligned_cols=257 Identities=27% Similarity=0.459 Sum_probs=207.0
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
...|.+.+.||+||.+.||++...+. +.||+|.+.... .+...+..+..|+..|.+|.+|.+||+||+|-..++++|+
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~-~iyalkkv~~~~-~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYm 437 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDK-QIYALKKVVLLE-ADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYM 437 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCC-cchhhhHHHHhh-cCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEE
Confidence 35699999999999999999988654 567777665433 2455678899999999999999999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 146 IMDLCAGGELFDRIIAKGH-YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~~-l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
||||- ..+|..+|.++.. ++.-.+..+.+||+.|+.++|++||||.||||.|+|+. .+.+||+|||+|..+.+.
T Consensus 438 vmE~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV----kG~LKLIDFGIA~aI~~D 512 (677)
T KOG0596|consen 438 VMECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV----KGRLKLIDFGIANAIQPD 512 (677)
T ss_pred Eeecc-cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE----eeeEEeeeechhcccCcc
Confidence 99975 5799998887655 34357888999999999999999999999999999995 678999999999988654
Q ss_pred C---cccccccCCCccCchhhcc------------cCCCcchhHHHHHHHHHHhhCCCCCCCCC-HHHHHHHHHcCCCCC
Q 010013 225 D---VFKDLVGSAYYVAPEVLRR------------NYGAEADIWSAGVILYILLSGVPPFWGET-EQSIFDAILRGHIDF 288 (520)
Q Consensus 225 ~---~~~~~~gt~~y~aPE~~~~------------~~~~~~Dv~slG~~l~~ll~g~~pf~~~~-~~~~~~~~~~~~~~~ 288 (520)
. .....+||+.||+||.+.. ..++++|||||||+||+|+.|+.||.... ...-+..|.......
T Consensus 513 TTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~I 592 (677)
T KOG0596|consen 513 TTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEI 592 (677)
T ss_pred ccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccc
Confidence 3 2345789999999998731 15689999999999999999999997654 223333444332222
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 289 SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 289 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
..+..+. ..++.+++..||..||++|||+.++|+|||++..
T Consensus 593 efp~~~~-~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~~ 633 (677)
T KOG0596|consen 593 EFPDIPE-NDELIDVMKCCLARDPKKRWSIPELLQHPFLQIQ 633 (677)
T ss_pred cccCCCC-chHHHHHHHHHHhcCcccCCCcHHHhcCcccccc
Confidence 2111111 2338999999999999999999999999999863
|
|
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-43 Score=341.17 Aligned_cols=255 Identities=28% Similarity=0.440 Sum_probs=206.2
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhcc--CCCCeeEEEEEEEe-----C
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT--GHRNIVELKGAYED-----R 140 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~--~hp~iv~l~~~~~~-----~ 140 (520)
+|.+.+.||+|+||.||+|.++.+++.+|+|.+...... ......+.+|+.+++.+. +||||+++++++.. .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNE-DGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCC-CCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 488999999999999999999999999999998653321 122234567777777764 49999999998764 3
Q ss_pred CeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccc
Q 010013 141 HSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218 (520)
Q Consensus 141 ~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a 218 (520)
..+++||||+.+ +|.+++... ..+++..+..++.|++.||.|||+.||+||||||+||+++ .++.+||+|||++
T Consensus 80 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~---~~~~~kl~dfg~~ 155 (288)
T cd07863 80 TKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVT---SGGQVKLADFGLA 155 (288)
T ss_pred ceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CCCCEEECccCcc
Confidence 458999999975 888888664 3489999999999999999999999999999999999994 5677999999999
Q ss_pred cccCCCCcccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCC----------
Q 010013 219 VFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID---------- 287 (520)
Q Consensus 219 ~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~---------- 287 (520)
.............|++.|+|||++. ..++.++|||||||++|+|++|.+||.+.........+......
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07863 156 RIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDV 235 (288)
T ss_pred ccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccc
Confidence 8765444444567899999999885 45899999999999999999999999887766555444321100
Q ss_pred ------CC-------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 288 ------FS-------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 288 ------~~-------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
+. ....+.++..+.++|.+||+.||++|||+.+++.||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 236 TLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred cccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 00 01124578889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-43 Score=349.24 Aligned_cols=259 Identities=29% Similarity=0.448 Sum_probs=208.1
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC--
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH-- 141 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~-- 141 (520)
.+.++|.+.+.||+|+||.||+|.+..+|..+|+|++.... ........+.+|+.+++.++ ||||+++++++....
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~ 95 (359)
T cd07876 18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPF-QNQTHAKRAYRELVLLKCVN-HKNIISLLNVFTPQKSL 95 (359)
T ss_pred hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccc-cchhHHHHHHHHHHHHHhCC-CCCEeeeeeeeccCCCc
Confidence 45678999999999999999999999999999999986432 23344567889999999998 999999999986543
Q ss_pred ----eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccc
Q 010013 142 ----SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (520)
Q Consensus 142 ----~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~ 217 (520)
.+|+||||+.+ +|.+.+. ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+
T Consensus 96 ~~~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~---~~~~~kl~Dfg~ 169 (359)
T cd07876 96 EEFQDVYLVMELMDA-NLCQVIH--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---SDCTLKILDFGL 169 (359)
T ss_pred cccceeEEEEeCCCc-CHHHHHh--ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC---CCCCEEEecCCC
Confidence 57999999965 5666553 3588999999999999999999999999999999999994 567899999999
Q ss_pred ccccCCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHc-------------
Q 010013 218 SVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR------------- 283 (520)
Q Consensus 218 a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~------------- 283 (520)
+.............||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+..
T Consensus 170 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (359)
T cd07876 170 ARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRL 249 (359)
T ss_pred ccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHH
Confidence 987654444455678999999999865 588999999999999999999999987664333222111
Q ss_pred ---------CCCCCCC----------------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 284 ---------GHIDFSS----------------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 284 ---------~~~~~~~----------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
.....+. ......++.+++||.+||..||++|||+.|+|+||||...
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~ 321 (359)
T cd07876 250 QPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVW 321 (359)
T ss_pred HHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhhh
Confidence 1111100 0011246789999999999999999999999999999753
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-43 Score=344.18 Aligned_cols=258 Identities=29% Similarity=0.463 Sum_probs=211.8
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+.+.||+|+||.||+|.++.++..+|+|.+..... ......+.+|+.++++++ ||||+++++++..++..++|
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 82 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKDLK-HANIVTLHDIVHTDKSLTLV 82 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc--CCcchhHHHHHHHHHhCC-CCCcceEEEEEeeCCeEEEE
Confidence 569999999999999999999999999999999865432 222345778999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 147 MDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
|||+++ +|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||++.......
T Consensus 83 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~---~~~~~kl~Dfg~~~~~~~~~ 158 (309)
T cd07872 83 FEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLIN---ERGELKLADFGLARAKSVPT 158 (309)
T ss_pred EeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEECccccceecCCCc
Confidence 999975 888877654 4589999999999999999999999999999999999994 56779999999987643222
Q ss_pred -cccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC----------------
Q 010013 226 -VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI---------------- 286 (520)
Q Consensus 226 -~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~---------------- 286 (520)
......+++.|+|||.+.+ .++.++|||||||++|+|++|+.||.+....+....+.....
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
T cd07872 159 KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEF 238 (309)
T ss_pred cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhh
Confidence 2234567899999998753 478899999999999999999999988776554444432110
Q ss_pred ---CCCC-------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 287 ---DFSS-------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 287 ---~~~~-------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
.++. ...+.++.++.++|.+||+.||.+|||+.++|+||||+...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~ 293 (309)
T cd07872 239 KNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG 293 (309)
T ss_pred hhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence 0000 11235788999999999999999999999999999998643
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-44 Score=324.75 Aligned_cols=256 Identities=32% Similarity=0.585 Sum_probs=237.2
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+.+.||+|.||.|-+++.+.+++.||+|++++..........--..|-++|+..+ ||.+..+--.|+..+.+|+|
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~-HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCR-HPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhcc-CcHHHHhhhhhccCceEEEE
Confidence 67889999999999999999999999999999999888777777777788999999999 99999998889999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc-CCCC
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF-KPGD 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~-~~~~ 225 (520)
|||..||.|.-+|.+...+++..+..+...|+.||.|||+++||+||||.+|.|+ +.++++||+|||+++.- ..+.
T Consensus 247 MeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlL---DkDGHIKitDFGLCKE~I~~g~ 323 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLL---DKDGHIKITDFGLCKEEIKYGD 323 (516)
T ss_pred EEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhhee---ccCCceEeeecccchhcccccc
Confidence 9999999999999999899999999999999999999999999999999999999 67899999999999863 4455
Q ss_pred cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Q 010013 226 VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (520)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (520)
....++|||.|+|||++.. .|++.+|.|.+||++|||++|+.||.......++..|.-....|+. .++++++.|+
T Consensus 324 t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr----~ls~eAktLL 399 (516)
T KOG0690|consen 324 TTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPR----TLSPEAKTLL 399 (516)
T ss_pred eeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCc----cCCHHHHHHH
Confidence 6778999999999999975 5999999999999999999999999999999999999998888876 6799999999
Q ss_pred HHhcccCCCCCC-----CHHHHHcCCccccC
Q 010013 305 KKMLHADPKERL-----SAAEVLNHPWMRVD 330 (520)
Q Consensus 305 ~~~l~~dp~~Rp-----s~~~~l~~~~~~~~ 330 (520)
..+|..||.+|. .+.++.+|+||...
T Consensus 400 sGLL~kdP~kRLGgGpdDakEi~~h~FF~~v 430 (516)
T KOG0690|consen 400 SGLLKKDPKKRLGGGPDDAKEIMRHRFFASV 430 (516)
T ss_pred HHHhhcChHhhcCCCchhHHHHHhhhhhccC
Confidence 999999999998 58999999999743
|
|
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-43 Score=348.64 Aligned_cols=259 Identities=28% Similarity=0.439 Sum_probs=210.4
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC---
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--- 140 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~--- 140 (520)
.+.++|.+.+.||+|+||.||+|.+..+++.+|||++.... ........+.+|+.+++.+. ||||+++++++...
T Consensus 21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~ii~~~~~~~~~~~~ 98 (364)
T cd07875 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN-HKNIIGLLNVFTPQKSL 98 (364)
T ss_pred chhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccc-cCchhHHHHHHHHHHHHhcC-CCCccccceeecccccc
Confidence 45678999999999999999999999999999999986432 23344567889999999998 99999999987543
Q ss_pred ---CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccc
Q 010013 141 ---HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (520)
Q Consensus 141 ---~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~ 217 (520)
..+|+||||+.+ +|.+.+.. .+++..+..++.|++.||.|||++||+||||||+|||++ .++.+||+|||+
T Consensus 99 ~~~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~~kL~DfG~ 172 (364)
T cd07875 99 EEFQDVYIVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---SDCTLKILDFGL 172 (364)
T ss_pred cccCeEEEEEeCCCC-CHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEEC---CCCcEEEEeCCC
Confidence 357999999965 67666643 588999999999999999999999999999999999994 567899999999
Q ss_pred ccccCCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCC---------
Q 010013 218 SVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID--------- 287 (520)
Q Consensus 218 a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~--------- 287 (520)
++............||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.........+......
T Consensus 173 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (364)
T cd07875 173 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL 252 (364)
T ss_pred ccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhh
Confidence 987654444455678999999999865 5889999999999999999999999887765555444321110
Q ss_pred -------------CC----------------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 288 -------------FS----------------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 288 -------------~~----------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
+. .......+..+++||.+||+.||++|||+.++|+||||...
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~ 324 (364)
T cd07875 253 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 324 (364)
T ss_pred hHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccccc
Confidence 00 00011234678999999999999999999999999999753
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-43 Score=344.89 Aligned_cols=256 Identities=25% Similarity=0.384 Sum_probs=213.0
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.++|.+.+.||+|+||.||++.+..++..+|+|.+.... .....+.+.+|+++++++. ||||+++++++.+.+.+++
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~l 80 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECN-SPYIVGFYGAFYSDGEISI 80 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCC-CCcccceeEEEEECCEEEE
Confidence 468999999999999999999999999999999886432 2334567899999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHc-CCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM-GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
||||++|++|.+++...+.+++..+..++.|++.||.|||+. +++|+||||+|||++ .++.+||+|||++......
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~---~~~~~kL~Dfg~~~~~~~~ 157 (333)
T cd06650 81 CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN---SRGEIKLCDFGVSGQLIDS 157 (333)
T ss_pred EEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEc---CCCCEEEeeCCcchhhhhh
Confidence 999999999999998888899999999999999999999985 799999999999994 4667999999998765322
Q ss_pred CcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHH---------------------
Q 010013 225 DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL--------------------- 282 (520)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~--------------------- 282 (520)
......|++.|+|||++.+ .++.++|||||||++|++++|+.||...........+.
T Consensus 158 -~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (333)
T cd06650 158 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGR 236 (333)
T ss_pred -ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccc
Confidence 2234578999999999865 48889999999999999999999997655433322110
Q ss_pred -----------------------cCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 283 -----------------------RGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 283 -----------------------~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
.... +......++.++++||.+||+.||++|||+.++++||||+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 305 (333)
T cd06650 237 PLSSYGPDSRPPMAIFELLDYIVNEPP--PKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 305 (333)
T ss_pred hhhhhcccccccccHHHHHHHHhcCCC--ccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence 0000 000111357889999999999999999999999999999754
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-45 Score=354.80 Aligned_cols=259 Identities=29% Similarity=0.496 Sum_probs=225.4
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
..+.|.|+..||.|+||.||+|..+.++-..|.|+|.. ...+.++.+.-|+.||..|. ||+||+|++.|..++.++
T Consensus 30 P~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIet---kseEELEDylVEIeILa~Cd-HP~ivkLl~ayy~enkLw 105 (1187)
T KOG0579|consen 30 PRDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIET---KSEEELEDYLVEIEILAECD-HPVIVKLLSAYYFENKLW 105 (1187)
T ss_pred HHHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcc---cchhHHhhhhhhhhhhhcCC-ChHHHHHHHHHhccCceE
Confidence 45678999999999999999999999988888999853 34567888999999999998 999999999998899999
Q ss_pred EEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC-
Q 010013 145 LIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK- 222 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~- 222 (520)
|+.|||.||-+...+.. ...|++.++..+++|++.||.|||+++|||||||..|||+. -++.++|+|||.+....
T Consensus 106 iliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~T---ldGdirLADFGVSAKn~~ 182 (1187)
T KOG0579|consen 106 ILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLT---LDGDIRLADFGVSAKNKS 182 (1187)
T ss_pred EEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEE---ecCcEeeecccccccchh
Confidence 99999999999887766 45699999999999999999999999999999999999995 45669999999976543
Q ss_pred CCCcccccccCCCccCchhhc------ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCC
Q 010013 223 PGDVFKDLVGSAYYVAPEVLR------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (520)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~------~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (520)
.......++|||+|||||+.. .+|+.++||||||++|.+|..+.+|....+...++-.|.+..++....+ ...
T Consensus 183 t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqP-S~W 261 (1187)
T KOG0579|consen 183 TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQP-SHW 261 (1187)
T ss_pred HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCc-chh
Confidence 223446789999999999863 3589999999999999999999999988888888878877665543332 456
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 297 SSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 297 ~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
+..+.+|+.+||..||..||++.++|+||||+...
T Consensus 262 s~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~ 296 (1187)
T KOG0579|consen 262 SRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAP 296 (1187)
T ss_pred hhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCC
Confidence 78999999999999999999999999999998654
|
|
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-43 Score=360.39 Aligned_cols=253 Identities=28% Similarity=0.463 Sum_probs=217.6
Q ss_pred cceeecceeeccCCeEEEEEEEcCC-CcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDT-KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
..|.+.+.||+|++|.||+|....+ +..+|+|.+... .......+++|+.+++.+. ||||+++++++..++.+|+
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~---~~~~~~~~~~E~~~l~~l~-Hpniv~~~~~~~~~~~~~l 142 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN---DERQAAYARSELHCLAACD-HFGIVKHFDDFKSDDKLLL 142 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC---CHHHHHHHHHHHHHHHhCC-CCCEeEEEEEEEECCEEEE
Confidence 4499999999999999999998877 788888876432 2334466788999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 146 IMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~----~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
||||++||+|.+++.. ..++++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++...
T Consensus 143 v~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~---~~~~~kL~DFgla~~~ 219 (478)
T PTZ00267 143 IMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLM---PTGIIKLGDFGFSKQY 219 (478)
T ss_pred EEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEEC---CCCcEEEEeCcCceec
Confidence 9999999999887753 34689999999999999999999999999999999999994 5678999999999876
Q ss_pred CCCC---cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 010013 222 KPGD---VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (520)
Q Consensus 222 ~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (520)
.... .....+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+..+..... ...++
T Consensus 220 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~---~~~~s 296 (478)
T PTZ00267 220 SDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDPF---PCPVS 296 (478)
T ss_pred CCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC---CccCC
Confidence 4332 1234579999999999864 488999999999999999999999998888888887776654321 13578
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHcCCcccc
Q 010013 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 298 ~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
..+.++|.+||..+|++|||+.+++.|+|++.
T Consensus 297 ~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~ 328 (478)
T PTZ00267 297 SGMKALLDPLLSKNPALRPTTQQLLHTEFLKY 328 (478)
T ss_pred HHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence 99999999999999999999999999999964
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-44 Score=346.39 Aligned_cols=250 Identities=24% Similarity=0.439 Sum_probs=210.6
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
..+...++.+||+|.||+||+|.|.++ ||||++..... +++.++.|+.|+.++++-+ |.||+-++|++..+.. .
T Consensus 390 p~~ev~l~~rIGsGsFGtV~Rg~whGd---VAVK~Lnv~~p-t~~qlqaFKnEVa~lkkTR-H~NIlLFMG~~~~p~~-A 463 (678)
T KOG0193|consen 390 PPEEVLLGERIGSGSFGTVYRGRWHGD---VAVKLLNVDDP-TPEQLQAFKNEVAVLKKTR-HENILLFMGACMNPPL-A 463 (678)
T ss_pred CHHHhhccceeccccccceeecccccc---eEEEEEecCCC-CHHHHHHHHHHHHHHhhcc-hhhheeeehhhcCCce-e
Confidence 345567889999999999999999764 99999976543 5568899999999999999 9999999999988877 9
Q ss_pred EEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC-
Q 010013 145 LIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK- 222 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~- 222 (520)
||+.+|+|.+|+.+++-. ..|.....+.|++||++|+.|||.++|||||||..||++ .+++.|||+|||++....
T Consensus 464 IiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl---~~~~kVkIgDFGLatvk~~ 540 (678)
T KOG0193|consen 464 IITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFL---HEDLKVKIGDFGLATVKTR 540 (678)
T ss_pred eeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEE---ccCCcEEEecccceeeeee
Confidence 999999999999999654 468999999999999999999999999999999999999 566889999999987532
Q ss_pred --CCCcccccccCCCccCchhhcc----cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC-CCCCCC
Q 010013 223 --PGDVFKDLVGSAYYVAPEVLRR----NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS-SDPWPN 295 (520)
Q Consensus 223 --~~~~~~~~~gt~~y~aPE~~~~----~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~ 295 (520)
.........|...|||||+++. .|+..+|||||||++|||++|..||.......++-.+-++..... .....+
T Consensus 541 w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~s~ 620 (678)
T KOG0193|consen 541 WSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIRSN 620 (678)
T ss_pred eccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchhhhcc
Confidence 2233445568889999999862 489999999999999999999999996666655555555532221 223357
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 296 ISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 296 ~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
+++++++|+..||..++++||++.++|.
T Consensus 621 ~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 621 CPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred CHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 7889999999999999999999999986
|
|
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-43 Score=360.90 Aligned_cols=257 Identities=31% Similarity=0.524 Sum_probs=219.0
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC---
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH--- 141 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~--- 141 (520)
..++|.+.+.||+|+||+||+|.+..+++.||||++..... .......+.+|+.++..+. |+||+++++.+....
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~~~-h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM-SEADKNRAQAEVCCLLNCD-FFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHhcCC-CCcEEEeecceecccccC
Confidence 44689999999999999999999999999999999865433 3344567889999999998 999999987764322
Q ss_pred -----eEEEEEeccCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeE
Q 010013 142 -----SVNLIMDLCAGGELFDRIIAK----GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKA 212 (520)
Q Consensus 142 -----~~~lv~e~~~g~~L~~~l~~~----~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl 212 (520)
.+++||||+++|+|.+++... ..+++..+..++.|++.||.|||+.||+||||||+|||++ .++.+||
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~---~~~~vkL 184 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLC---SNGLVKL 184 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEe---CCCCEEE
Confidence 378999999999999988652 4689999999999999999999999999999999999994 5678999
Q ss_pred eecccccccCCC---CcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCC
Q 010013 213 TDFGLSVFFKPG---DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDF 288 (520)
Q Consensus 213 ~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~ 288 (520)
+|||+++..... .......||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+....+....+..+....
T Consensus 185 ~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~ 264 (496)
T PTZ00283 185 GDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDP 264 (496)
T ss_pred EecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCC
Confidence 999999865432 12234679999999999875 58999999999999999999999999988888777777655432
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcccc
Q 010013 289 SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 289 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
..+.+++.+.+++.+||+.||++|||+.++++|||++.
T Consensus 265 ---~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~ 302 (496)
T PTZ00283 265 ---LPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKL 302 (496)
T ss_pred ---CCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence 22467899999999999999999999999999999874
|
|
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-44 Score=338.55 Aligned_cols=254 Identities=37% Similarity=0.673 Sum_probs=211.2
Q ss_pred eeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 010013 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMD 148 (520)
Q Consensus 69 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e 148 (520)
|++++.||+|+||+||++.+..+++.+|+|++....... .......+|+.+++++. ||||+++++++......++|||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~~v~~ 78 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEE-EEREENIREIKILRRLR-HPNIVQILDVFQDDNYLYIVME 78 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHH-HHHHHHHHHHHHHHHHT-BTTBCHEEEEEEESSEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccc-cccchhhhhhhcccccc-cccccccccccccccccccccc
Confidence 788999999999999999999999999999997653211 12223456999999996 9999999999999999999999
Q ss_pred ccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc-CCCCcc
Q 010013 149 LCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF-KPGDVF 227 (520)
Q Consensus 149 ~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~-~~~~~~ 227 (520)
++.+++|.+++...+.++...+..++.||+.||.+||++|++|+||||+||+++ .++.++|+|||.+... ......
T Consensus 79 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~---~~~~~~l~Dfg~~~~~~~~~~~~ 155 (260)
T PF00069_consen 79 YCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLD---ENGEVKLIDFGSSVKLSENNENF 155 (260)
T ss_dssp EETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEES---TTSEEEESSGTTTEESTSTTSEB
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccc
Confidence 999999999998788899999999999999999999999999999999999994 5677999999999863 233344
Q ss_pred cccccCCCccCchhhc--ccCCCcchhHHHHHHHHHHhhCCCCCCCCCH---HHHHHHHHcCCCCCCCCCCCCCCHHHHH
Q 010013 228 KDLVGSAYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETE---QSIFDAILRGHIDFSSDPWPNISSSAKD 302 (520)
Q Consensus 228 ~~~~gt~~y~aPE~~~--~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (520)
....+++.|+|||++. ..++.++||||||+++|+|++|..||..... ......................+..+.+
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 235 (260)
T PF00069_consen 156 NPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRD 235 (260)
T ss_dssp SSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHH
Confidence 5667899999999987 4589999999999999999999999988732 2333333222221111111223489999
Q ss_pred HHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 303 IVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 303 li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
+|.+||+.||++|||+.++++||||
T Consensus 236 li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 236 LIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp HHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred HHHHHccCChhHCcCHHHHhcCCCC
Confidence 9999999999999999999999998
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-43 Score=370.80 Aligned_cols=265 Identities=32% Similarity=0.539 Sum_probs=217.5
Q ss_pred cccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe-
Q 010013 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED- 139 (520)
Q Consensus 61 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~- 139 (520)
..+...++|.+.+.||+|+||+||+|.++.++..+|+|++..... .......+..|+.++++|. |||||+++++|..
T Consensus 7 ~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l-~e~~~~~~~~EI~IL~~L~-HPNIVrl~d~f~de 84 (1021)
T PTZ00266 7 DGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGL-KEREKSQLVIEVNVMRELK-HKNIVRYIDRFLNK 84 (1021)
T ss_pred CCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEecccc-CHHHHHHHHHHHHHHHHcC-CCCcCeEEEEEEec
Confidence 345566789999999999999999999999999999999865433 3344577889999999998 9999999998854
Q ss_pred -CCeEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHc-------CCeeecCCCCcEEeecC---
Q 010013 140 -RHSVNLIMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSM-------GVMHRDLKPENFLFSSS--- 204 (520)
Q Consensus 140 -~~~~~lv~e~~~g~~L~~~l~~----~~~l~~~~~~~i~~qi~~~l~~LH~~-------~ivH~Dlkp~NIll~~~--- 204 (520)
...+||||||+++++|.++|.. .+.+++..++.|+.||+.||.|||+. +||||||||+|||+...
T Consensus 85 ~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~ 164 (1021)
T PTZ00266 85 ANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRH 164 (1021)
T ss_pred CCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccc
Confidence 4679999999999999998865 35799999999999999999999985 49999999999999642
Q ss_pred -----------CCCCCeeEeecccccccCCCCcccccccCCCccCchhhcc---cCCCcchhHHHHHHHHHHhhCCCCCC
Q 010013 205 -----------AEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR---NYGAEADIWSAGVILYILLSGVPPFW 270 (520)
Q Consensus 205 -----------~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~Dv~slG~~l~~ll~g~~pf~ 270 (520)
+....+||+|||++.............||+.|+|||++.+ .++.++|||||||+||+|++|..||.
T Consensus 165 lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~ 244 (1021)
T PTZ00266 165 IGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFH 244 (1021)
T ss_pred cccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCC
Confidence 1234589999999987654444445679999999998842 47889999999999999999999997
Q ss_pred CCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 271 GETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
.......+......... .+....+..+.+||..||..+|.+|||+.|+|.|+|+...
T Consensus 245 ~~~~~~qli~~lk~~p~---lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i 301 (1021)
T PTZ00266 245 KANNFSQLISELKRGPD---LPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNV 301 (1021)
T ss_pred cCCcHHHHHHHHhcCCC---CCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence 66543333332222222 2234578999999999999999999999999999999744
|
|
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-42 Score=336.86 Aligned_cols=254 Identities=35% Similarity=0.677 Sum_probs=223.7
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
+.|.+.+.||+|+||.||++.+..+++.+|+|++...........+.+.+|+++++++. ||||+++++++.....+++|
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v 79 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIR-HPFLVNLYGSFQDDSNLYLV 79 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCccceeeEEEcCCeEEEE
Confidence 36899999999999999999999999999999987655444455677899999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCc
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 226 (520)
|||+++++|.+++...+.+++..+..++.||+.||.|||+.|++|+||+|+||+++ .++.+||+|||++......
T Consensus 80 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~---~~~~~kl~dfg~~~~~~~~-- 154 (290)
T cd05580 80 MEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLD---SDGYIKITDFGFAKRVKGR-- 154 (290)
T ss_pred EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEC---CCCCEEEeeCCCccccCCC--
Confidence 99999999999998888999999999999999999999999999999999999994 5677999999999876543
Q ss_pred ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHH
Q 010013 227 FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305 (520)
Q Consensus 227 ~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 305 (520)
.....|++.|+|||.+.+ .++.++||||||+++|+|++|..||...........+..+...++ ..++..++++|.
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~ 230 (290)
T cd05580 155 TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFP----SFFSPDAKDLIR 230 (290)
T ss_pred CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCC----ccCCHHHHHHHH
Confidence 334578999999998754 578899999999999999999999988877777777766554443 356899999999
Q ss_pred HhcccCCCCCC-----CHHHHHcCCccccC
Q 010013 306 KMLHADPKERL-----SAAEVLNHPWMRVD 330 (520)
Q Consensus 306 ~~l~~dp~~Rp-----s~~~~l~~~~~~~~ 330 (520)
+||..+|.+|+ +++++++||||...
T Consensus 231 ~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 260 (290)
T cd05580 231 NLLQVDLTKRLGNLKNGVNDIKNHPWFAGI 260 (290)
T ss_pred HHccCCHHHccCcccCCHHHHHcCcccccC
Confidence 99999999999 99999999999753
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-43 Score=350.81 Aligned_cols=257 Identities=28% Similarity=0.441 Sum_probs=211.9
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC-----e
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH-----S 142 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~-----~ 142 (520)
.|.+++.||+|+||.||+|.+..+++.||+|++... .......+.+.+|+.+++.++ ||||+++++++.... .
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 78 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNV-FQNLVSCKRVFRELKMLCFFK-HDNVLSALDILQPPHIDPFEE 78 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEecccc-ccchHHHHHHHHHHHHHHhCC-CCCcCCHhheecCCCccccce
Confidence 377889999999999999999999999999988542 223334567889999999998 999999999998776 7
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
.|+||||+. ++|.+.+...+.+++..+..++.||+.||.|||+.||+||||||+|||+ +.++.+||+|||++....
T Consensus 79 ~~lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili---~~~~~~kL~Dfg~a~~~~ 154 (372)
T cd07853 79 IYVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLV---NSNCVLKICDFGLARVEE 154 (372)
T ss_pred EEEEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEE---CCCCCEEeccccceeecc
Confidence 899999996 5888888888889999999999999999999999999999999999999 456789999999998653
Q ss_pred CCC--cccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC--------------
Q 010013 223 PGD--VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG-------------- 284 (520)
Q Consensus 223 ~~~--~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~-------------- 284 (520)
... ......+++.|+|||.+.+ .++.++|||||||++|+|++|+.||.+.........+...
T Consensus 155 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 234 (372)
T cd07853 155 PDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACE 234 (372)
T ss_pred cCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhH
Confidence 322 2234467899999998864 3788999999999999999999999887765544443221
Q ss_pred ---------CCCCCC-----CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 285 ---------HIDFSS-----DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 285 ---------~~~~~~-----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
....+. ......++++.+||.+||+.||++|||+.++|+||||...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~ 294 (372)
T cd07853 235 GARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEG 294 (372)
T ss_pred HHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCC
Confidence 111000 1123457899999999999999999999999999999754
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-43 Score=347.57 Aligned_cols=260 Identities=28% Similarity=0.432 Sum_probs=209.3
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC---
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--- 140 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~--- 140 (520)
.+.++|.+.+.||+|+||.||+|.+..+++.+|+|++.... ........+.+|+.+++.+. ||||+++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~ 91 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN-HKNIISLLNVFTPQKSL 91 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcc-cChHHHHHHHHHHHHHHHhC-CCchhceeeeeeccccc
Confidence 45678999999999999999999999999999999986432 23334567788999999998 99999999988643
Q ss_pred ---CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccc
Q 010013 141 ---HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (520)
Q Consensus 141 ---~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~ 217 (520)
...++||||+.+ +|.+.+.. .+++..+..++.|++.||.|||++||+||||||+|||++ .++.+||+|||+
T Consensus 92 ~~~~~~~lv~e~~~~-~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~---~~~~~kl~Dfg~ 165 (355)
T cd07874 92 EEFQDVYLVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---SDCTLKILDFGL 165 (355)
T ss_pred cccceeEEEhhhhcc-cHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEC---CCCCEEEeeCcc
Confidence 357999999965 66666643 588999999999999999999999999999999999994 567899999999
Q ss_pred ccccCCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCC-----------
Q 010013 218 SVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH----------- 285 (520)
Q Consensus 218 a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~----------- 285 (520)
++............||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+....+....+....
T Consensus 166 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (355)
T cd07874 166 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 245 (355)
T ss_pred cccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence 987655444455679999999999865 58899999999999999999999998776544333221110
Q ss_pred -----------CCC----------------CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 286 -----------IDF----------------SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 286 -----------~~~----------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
... ........+..+++||.+||..||++|||+.|+|+||||....
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~~ 318 (355)
T cd07874 246 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVWY 318 (355)
T ss_pred cHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhccc
Confidence 000 0001122456789999999999999999999999999997543
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-45 Score=329.05 Aligned_cols=255 Identities=23% Similarity=0.439 Sum_probs=217.9
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
+.|.+.++||+|+||.||+|.|+.+|+.+|||.+... ..++.+..|+.+|+++. .|++|++||.|.....++||
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-----sDLQEIIKEISIMQQC~-S~yVVKYYGSYFK~sDLWIV 106 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-----TDLQEIIKEISIMQQCK-SKYVVKYYGSYFKHSDLWIV 106 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc-----chHHHHHHHHHHHHHcC-CchhhhhhhhhccCCceEee
Confidence 3488899999999999999999999999999988543 45788999999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 147 MDLCAGGELFDRII-AKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~-~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
||||..|++.+.+. +++++++.++..+++..++||.|||...-+|||||..|||++ -+++.||+|||.|..+....
T Consensus 107 MEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLN---T~G~AKLADFGVAGQLTDTM 183 (502)
T KOG0574|consen 107 MEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLN---TDGIAKLADFGVAGQLTDTM 183 (502)
T ss_pred hhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEc---ccchhhhhhccccchhhhhH
Confidence 99999999999885 456799999999999999999999999999999999999995 46789999999998875443
Q ss_pred -cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHH
Q 010013 226 -VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (520)
Q Consensus 226 -~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (520)
..++.+|||.|||||++.. .|+.++||||||++..||.-|++||.+..+....-.|-....+ ........+.++.++
T Consensus 184 AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPP-TF~KPE~WS~~F~DF 262 (502)
T KOG0574|consen 184 AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPP-TFKKPEEWSSEFNDF 262 (502)
T ss_pred HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCCC-CCCChHhhhhHHHHH
Confidence 3356789999999999975 5999999999999999999999999876654332222222111 111123457889999
Q ss_pred HHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 304 VKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 304 i~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
+++||-.+|++|-|+.++++|||++...
T Consensus 263 i~~CLiK~PE~R~TA~~L~~H~FiknA~ 290 (502)
T KOG0574|consen 263 IRSCLIKKPEERKTALRLCEHTFIKNAP 290 (502)
T ss_pred HHHHhcCCHHHHHHHHHHhhhhhhcCCC
Confidence 9999999999999999999999998654
|
|
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-42 Score=329.70 Aligned_cols=255 Identities=28% Similarity=0.477 Sum_probs=215.1
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCC--cccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN--RDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~--~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
+.|.+.+.||+|++|.||.|.+..+++.+|+|.+....... ....+.+.+|+.+++++. ||||+++++++......+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~ 80 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQ-HERIVQYYGCLRDDETLS 80 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCC-CCCeeeeEEEEccCCeEE
Confidence 45889999999999999999999999999999986443211 223467889999999998 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
+|+||++|++|.+.+...+.+++..+..++.|++.||.|||+.|++|+||+|+||+++ .++.++|+|||++......
T Consensus 81 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~---~~~~~~l~dfg~~~~~~~~ 157 (263)
T cd06625 81 IFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRD---SAGNVKLGDFGASKRLQTI 157 (263)
T ss_pred EEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEeecccceecccc
Confidence 9999999999999998888899999999999999999999999999999999999994 5677999999998765432
Q ss_pred Ccc----cccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHH
Q 010013 225 DVF----KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (520)
Q Consensus 225 ~~~----~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (520)
... ....|+..|+|||.+.+ .++.++||||||+++|++++|+.||...........+....... .....++..
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 235 (263)
T cd06625 158 CSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNP--QLPSHVSPD 235 (263)
T ss_pred ccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCC--CCCccCCHH
Confidence 111 23467889999999865 47899999999999999999999998766555444443332221 122467899
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 300 AKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 300 ~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
+.+++.+||..+|++|||+.++++|+||
T Consensus 236 ~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 236 ARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred HHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 9999999999999999999999999997
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-43 Score=342.04 Aligned_cols=255 Identities=27% Similarity=0.477 Sum_probs=220.9
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
..|.-.+.||.|+||.||-|++..+...||||++........+..+.+..|+..|++++ |||++.+-|+|..+...|+|
T Consensus 26 klf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~-HPntieYkgCyLre~TaWLV 104 (948)
T KOG0577|consen 26 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLR-HPNTIEYKGCYLREHTAWLV 104 (948)
T ss_pred HHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhcc-CCCcccccceeeccchHHHH
Confidence 45666789999999999999999999999999998766555555678999999999999 99999999999999999999
Q ss_pred EeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 147 MDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
||||-| +-.|++.- ++++.+-.+..|+.+.+.||+|||+++.||||||..|||+ .+.+.|||+|||.|....+.
T Consensus 105 MEYClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILL---se~g~VKLaDFGSAsi~~PA- 179 (948)
T KOG0577|consen 105 MEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILL---SEPGLVKLADFGSASIMAPA- 179 (948)
T ss_pred HHHHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEe---cCCCeeeeccccchhhcCch-
Confidence 999965 66666643 4579999999999999999999999999999999999999 56888999999999876543
Q ss_pred cccccccCCCccCchhhc----ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHH
Q 010013 226 VFKDLVGSAYYVAPEVLR----RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (520)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~----~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (520)
..++|||.|||||++- |.|+-++|||||||+..+|.-.++|+...+....+..|..+..+.... +..+..++
T Consensus 180 --nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLqs--~eWS~~F~ 255 (948)
T KOG0577|consen 180 --NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQS--NEWSDYFR 255 (948)
T ss_pred --hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCCC--chhHHHHH
Confidence 5689999999999873 679999999999999999999999988777666666666554433321 34578899
Q ss_pred HHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 302 DIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 302 ~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
.|+..||+.-|.+|||.+++|+|+|.....
T Consensus 256 ~Fvd~CLqKipqeRptse~ll~H~fv~R~R 285 (948)
T KOG0577|consen 256 NFVDSCLQKIPQERPTSEELLKHRFVLRER 285 (948)
T ss_pred HHHHHHHhhCcccCCcHHHHhhcchhccCC
Confidence 999999999999999999999999998654
|
|
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-42 Score=335.08 Aligned_cols=258 Identities=28% Similarity=0.470 Sum_probs=211.7
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+.+.||+|+||.||+|.++.+++.||+|.+..... ......+.+|+.+++++. ||||+++++++..++..++|
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~nI~~~~~~~~~~~~~~lv 82 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDLK-HANIVTLHDIIHTEKSLTLV 82 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc--cCchhHHHHHHHHHHhcC-CCCcceEEEEEecCCeEEEE
Confidence 579999999999999999999999999999999864332 222345778999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 147 MDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
|||+. ++|.+.+... ..+++..+..++.||+.||.|||+.||+|+||||+||+++ .++.++|+|||++.......
T Consensus 83 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~dfg~~~~~~~~~ 158 (301)
T cd07873 83 FEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLIN---ERGELKLADFGLARAKSIPT 158 (301)
T ss_pred Eeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEEC---CCCcEEECcCcchhccCCCC
Confidence 99996 5888887654 4689999999999999999999999999999999999994 56779999999987643222
Q ss_pred -cccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCC---------------
Q 010013 226 -VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID--------------- 287 (520)
Q Consensus 226 -~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~--------------- 287 (520)
......+++.|+|||++.+ .++.++|||||||++|+|++|++||......+....+......
T Consensus 159 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (301)
T cd07873 159 KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEF 238 (301)
T ss_pred CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccc
Confidence 2234467899999998754 4788999999999999999999999887765554443321110
Q ss_pred ----CCC-------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 288 ----FSS-------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 288 ----~~~-------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
.+. ...+.++..+.+||.+||+.||.+|||+.++|+||||+...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~ 293 (301)
T cd07873 239 KSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLG 293 (301)
T ss_pred cccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence 000 01135788999999999999999999999999999997554
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-42 Score=343.82 Aligned_cols=254 Identities=25% Similarity=0.417 Sum_probs=204.6
Q ss_pred ccccceeecceeeccCCeEEEEEEEcC--CCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKD--TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~--~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~ 141 (520)
.+..+|.+.+.||+|+||.||+|.... ++..||+|.+... ....+|+.++++++ ||||+++++++....
T Consensus 89 ~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--------~~~~~E~~il~~l~-h~~iv~~~~~~~~~~ 159 (392)
T PHA03207 89 VVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--------KTPGREIDILKTIS-HRAIINLIHAYRWKS 159 (392)
T ss_pred hccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc--------ccHHHHHHHHHhcC-CCCccceeeeEeeCC
Confidence 345679999999999999999998653 4678999987532 23568999999998 999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 142 SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
.+++|||++. ++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.++|+|||++...
T Consensus 160 ~~~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill---~~~~~~~l~DfG~a~~~ 235 (392)
T PHA03207 160 TVCMVMPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFL---DEPENAVLGDFGAACKL 235 (392)
T ss_pred EEEEEehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---cCCCCEEEccCcccccc
Confidence 9999999995 6888888777889999999999999999999999999999999999999 45678999999999765
Q ss_pred CCCCc---ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCH---HHHHHHHHcC----CCCCCC
Q 010013 222 KPGDV---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETE---QSIFDAILRG----HIDFSS 290 (520)
Q Consensus 222 ~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~---~~~~~~~~~~----~~~~~~ 290 (520)
..... .....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+... ...+..+.+. ...++.
T Consensus 236 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~ 315 (392)
T PHA03207 236 DAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQ 315 (392)
T ss_pred CcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCC
Confidence 43221 224579999999999874 588999999999999999999999976532 1111111110 000000
Q ss_pred --------------------CC------CCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 291 --------------------DP------WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 291 --------------------~~------~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
.. ...++.++.++|.+||..||++|||+.++|.||||...
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~ 381 (392)
T PHA03207 316 NGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKE 381 (392)
T ss_pred ccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhcc
Confidence 00 01346788999999999999999999999999999753
|
|
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-42 Score=328.44 Aligned_cols=256 Identities=30% Similarity=0.504 Sum_probs=217.5
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+.+.||.|++|.||+|.+..+++.+|+|.+.... .......+.+|+.+++.+. ||||+++++++.++...++|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v 77 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE--AEDEIEDIQQEIQFLSQCR-SPYITKYYGSFLKGSKLWII 77 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc--cchHHHHHHHHHHHHHHcC-CCCeeeeeEEEEECCeEEEE
Confidence 36889999999999999999999999999999986432 2334567889999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC-C
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG-D 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~-~ 225 (520)
+||+++++|.+++... ++++..+..++.|++.||.|||+.+++|+||+|+||+++ .++.++|+|||++...... .
T Consensus 78 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~---~~~~~~l~d~g~~~~~~~~~~ 153 (274)
T cd06609 78 MEYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLS---EEGDVKLADFGVSGQLTSTMS 153 (274)
T ss_pred EEeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC---CCCCEEEcccccceeeccccc
Confidence 9999999999988765 899999999999999999999999999999999999994 5678999999999876543 2
Q ss_pred cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Q 010013 226 VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (520)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (520)
......+++.|+|||.+.+ .++.++||||||+++|+|++|..||...........+.....+... ...++..+.+++
T Consensus 154 ~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l 231 (274)
T cd06609 154 KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLE--GNKFSKPFKDFV 231 (274)
T ss_pred ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCCCc--ccccCHHHHHHH
Confidence 2334578889999998864 4889999999999999999999999877665555544444222111 122788999999
Q ss_pred HHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 305 KKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 305 ~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
.+||..+|++|||++++++||||....
T Consensus 232 ~~~l~~~p~~Rpt~~~il~~~~~~~~~ 258 (274)
T cd06609 232 SLCLNKDPKERPSAKELLKHKFIKKAK 258 (274)
T ss_pred HHHhhCChhhCcCHHHHhhChhhcCCC
Confidence 999999999999999999999998654
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-42 Score=326.61 Aligned_cols=253 Identities=30% Similarity=0.531 Sum_probs=213.3
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCc------ccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR------DDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~------~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~ 141 (520)
+|.+++.||+|++|.||+|.+..+++.+|+|.+........ ...+.+.+|+.+++++. ||||+++++++...+
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~ 79 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQ-HENIVQYLGSSLDAD 79 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcC-CCCeeeEEEEEEeCC
Confidence 47888999999999999999988899999998865432221 22356889999999998 999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 142 SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
..++||||+++++|.+++...+.+++..+..++.|++.||.|||+.|++||||+|+||++ +.++.++|+|||.+...
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~---~~~~~~~l~dfg~~~~~ 156 (267)
T cd06628 80 HLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILV---DNKGGIKISDFGISKKL 156 (267)
T ss_pred ccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEE---cCCCCEEecccCCCccc
Confidence 999999999999999999888889999999999999999999999999999999999999 45678999999998876
Q ss_pred CCCC-------cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCC
Q 010013 222 KPGD-------VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPW 293 (520)
Q Consensus 222 ~~~~-------~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 293 (520)
.... ......|+..|+|||.+.+ .++.++|||||||++|+|++|..||...........+..... ....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~ 233 (267)
T cd06628 157 EANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENAS---PEIP 233 (267)
T ss_pred ccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCC---CcCC
Confidence 4211 1123457889999998864 478899999999999999999999987765544444433221 1122
Q ss_pred CCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 294 PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 294 ~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
..++..+.++|.+||+.+|++||++.++++||||
T Consensus 234 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 234 SNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred cccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 4678999999999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-42 Score=330.71 Aligned_cols=256 Identities=28% Similarity=0.519 Sum_probs=212.3
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+.+.||+|++|.||+|.++.+++.||+|++..... .....+.+.+|+.+++++. ||||+++++++.....+++|
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~v 78 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESED-DPVIKKIALREIRMLKQLK-HPNLVNLIEVFRRKRKLHLV 78 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeeccc-CccccHHHHHHHHHHHhCC-CCCEeeeeeEEeeCCEEEEE
Confidence 468999999999999999999999999999998864322 2223456789999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC-
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~- 225 (520)
|||++++.|..++.....+++..+..++.||+.||.|||+.|++|+||||+||+++ .++.++|+|||++.......
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07847 79 FEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILIT---KQGQIKLCDFGFARILTGPGD 155 (286)
T ss_pred EeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEc---CCCcEEECccccceecCCCcc
Confidence 99999988887777767899999999999999999999999999999999999994 56779999999998765433
Q ss_pred cccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC-----------------
Q 010013 226 VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI----------------- 286 (520)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~----------------- 286 (520)
......++..|+|||.+.+ .++.++||||||+++|+|++|..||.+....+....+.....
T Consensus 156 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T cd07847 156 DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFK 235 (286)
T ss_pred cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccc
Confidence 2334567889999998754 478899999999999999999999988766544433321100
Q ss_pred --CCCC--------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 287 --DFSS--------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 287 --~~~~--------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
..+. ..++.++..+.+|+.+||..+|++|||+.+++.||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 236 GLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred cccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 0000 0124568899999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-42 Score=328.84 Aligned_cols=254 Identities=29% Similarity=0.477 Sum_probs=212.4
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.++|.+.+.||+|+||.||+|.+..+++.+|+|++.... ......+.+|+.+++.+. ||||+++++++...+.+++
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~~~~l~-h~~ii~~~~~~~~~~~~~l 83 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP---GEDFAVVQQEIIMMKDCK-HSNIVAYFGSYLRRDKLWI 83 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc---hhHHHHHHHHHHHHHhCC-CCCeeeEEEEEEeCCEEEE
Confidence 457999999999999999999999999999999986432 233456788999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
||||+++++|.+++...+.+++..+..++.|++.||.|||+.|++|+||||+||+++ .++.++|+|||++.......
T Consensus 84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~---~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06645 84 CMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLT---DNGHVKLADFGVSAQITATI 160 (267)
T ss_pred EEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEECcceeeeEccCcc
Confidence 999999999999998888999999999999999999999999999999999999994 56679999999987653221
Q ss_pred -cccccccCCCccCchhhc----ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCC-CCCCCCCHH
Q 010013 226 -VFKDLVGSAYYVAPEVLR----RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSS-DPWPNISSS 299 (520)
Q Consensus 226 -~~~~~~gt~~y~aPE~~~----~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 299 (520)
......|++.|+|||++. +.++.++|||||||++|+|++|..||...................+. .....++..
T Consensus 161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (267)
T cd06645 161 AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNS 240 (267)
T ss_pred cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHH
Confidence 223457899999999873 34788999999999999999999999765544333333333222111 111256789
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHcCCc
Q 010013 300 AKDIVKKMLHADPKERLSAAEVLNHPW 326 (520)
Q Consensus 300 ~~~li~~~l~~dp~~Rps~~~~l~~~~ 326 (520)
+.+++.+||..+|++|||+.++++|||
T Consensus 241 ~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 241 FHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred HHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 999999999999999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-42 Score=342.95 Aligned_cols=249 Identities=23% Similarity=0.346 Sum_probs=198.0
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
..|.+.+.||+|+||.||+|.+..++..||+|+.... ....|+.++++++ ||||+++++++......++|
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---------~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 135 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---------TTLIEAMLLQNVN-HPSVIRMKDTLVSGAITCMV 135 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---------ccHHHHHHHHhCC-CCCCcChhheEEeCCeeEEE
Confidence 4699999999999999999999999999999975322 2346899999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 147 MDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
||++. ++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +..+.+||+|||++.......
T Consensus 136 ~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill---~~~~~~kl~DfG~a~~~~~~~ 211 (357)
T PHA03209 136 LPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFI---NDVDQVCIGDLGAAQFPVVAP 211 (357)
T ss_pred EEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEEecCccccccccCc
Confidence 99995 588887765 4569999999999999999999999999999999999999 456779999999997644333
Q ss_pred cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCC-CCCCH----------HHHHHHHHcCC---CCCCC
Q 010013 226 VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPF-WGETE----------QSIFDAILRGH---IDFSS 290 (520)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf-~~~~~----------~~~~~~~~~~~---~~~~~ 290 (520)
......||+.|+|||++.+ .++.++|||||||++|+|+++..|+ ..... ..+...+.... ..++.
T Consensus 212 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 291 (357)
T PHA03209 212 AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPR 291 (357)
T ss_pred ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCC
Confidence 3345679999999998864 5899999999999999999865444 32211 01111111000 00000
Q ss_pred --------------------------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcccc
Q 010013 291 --------------------------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 291 --------------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
.....++..+.++|.+||+.||++|||+.|+|+||||+.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 292 DPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred CCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence 001245677888999999999999999999999999974
|
|
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-42 Score=327.73 Aligned_cols=255 Identities=25% Similarity=0.471 Sum_probs=211.4
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC---
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--- 140 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~--- 140 (520)
+..+.|.+.+.||+|+||.||+|.+..+++.+|+|++.... .....+.+|+.+++++.+||||+++++++...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 78 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 78 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCC
Confidence 44578999999999999999999999999999999985432 23467889999999996699999999998653
Q ss_pred ---CeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeec
Q 010013 141 ---HSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDF 215 (520)
Q Consensus 141 ---~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Df 215 (520)
..+++||||+.+++|.+++... ..+++..+..++.|++.||.|||++||+|+||||+||+++ +++.++|+||
T Consensus 79 ~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~---~~~~~~l~Df 155 (272)
T cd06637 79 GMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT---ENAEVKLVDF 155 (272)
T ss_pred CCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEEC---CCCCEEEccC
Confidence 4689999999999999988763 4689999999999999999999999999999999999994 5677999999
Q ss_pred ccccccCCCC-cccccccCCCccCchhhc------ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCC
Q 010013 216 GLSVFFKPGD-VFKDLVGSAYYVAPEVLR------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDF 288 (520)
Q Consensus 216 g~a~~~~~~~-~~~~~~gt~~y~aPE~~~------~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~ 288 (520)
|++....... ......|++.|+|||++. ..++.++|||||||++|+|++|..||...........+.... .
T Consensus 156 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~--~ 233 (272)
T cd06637 156 GVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNP--A 233 (272)
T ss_pred CCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCC--C
Confidence 9988654321 233457899999999874 247789999999999999999999997766544444333322 1
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 289 SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 289 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
.......++..+.+|+.+||..+|++|||+.++++||||
T Consensus 234 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 234 PRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred CCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 122234678999999999999999999999999999997
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-42 Score=335.46 Aligned_cols=258 Identities=34% Similarity=0.607 Sum_probs=220.6
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+.+.||+|++|.||+|.+..+++.+|+|.+...........+.+..|+.+++++. ||||+++++.+......++|
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv 79 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLD-HPFLPTLYASFQTETYLCLV 79 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCC-CCCchhheeeeecCCEEEEE
Confidence 36899999999999999999999999999999997655433345677899999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 147 MDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
|||+.|++|.+++... ..+++..+..++.|++.||.|||+.|++|+||||+||+++ .++.++|+|||++......
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~~l~dfg~~~~~~~~ 156 (316)
T cd05574 80 MDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLH---ESGHIMLSDFDLSKQSDVE 156 (316)
T ss_pred EEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEc---CCCCEEEeecchhhccccc
Confidence 9999999999988754 4689999999999999999999999999999999999994 5678999999998764321
Q ss_pred C------------------------------cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCC
Q 010013 225 D------------------------------VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGET 273 (520)
Q Consensus 225 ~------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~ 273 (520)
. ......|+..|+|||++.+ .++.++||||||+++|+|++|..||.+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~ 236 (316)
T cd05574 157 PPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN 236 (316)
T ss_pred ccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 1 1113467889999998864 47889999999999999999999998888
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC----HHHHHcCCccccC
Q 010013 274 EQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLS----AAEVLNHPWMRVD 330 (520)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~~~l~~~~~~~~ 330 (520)
.......+......++.. ..++..+.++|.+||..+|++||| ++++|+||||+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~ 295 (316)
T cd05574 237 RDETFSNILKKEVTFPGS--PPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGV 295 (316)
T ss_pred hHHHHHHHhcCCccCCCc--cccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcC
Confidence 777776666554443332 237899999999999999999999 9999999999754
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=344.92 Aligned_cols=250 Identities=23% Similarity=0.393 Sum_probs=202.1
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
...|.+.+.||+|+||.||+|.+..+++.||||... ...+.+|++++++++ |||||++++++...+..++
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~---------~~~~~~E~~iL~~L~-HpnIv~l~~~~~~~~~~~l 237 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW---------YASSVHEARLLRRLS-HPAVLALLDVRVVGGLTCL 237 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc---------ccCHHHHHHHHHHCC-CCCCCcEEEEEEECCEEEE
Confidence 457999999999999999999999999999999642 133568999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 146 IMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
|||++. ++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.....
T Consensus 238 v~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~---~~~~vkL~DFGla~~~~~~ 313 (461)
T PHA03211 238 VLPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVN---GPEDICLGDFGAACFARGS 313 (461)
T ss_pred EEEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEEC---CCCCEEEcccCCceecccc
Confidence 999995 6888887654 4699999999999999999999999999999999999994 5667999999999865432
Q ss_pred C---cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCC--------HHHHHHHHHcCCCC---C-
Q 010013 225 D---VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGET--------EQSIFDAILRGHID---F- 288 (520)
Q Consensus 225 ~---~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~--------~~~~~~~~~~~~~~---~- 288 (520)
. ......||+.|+|||++.+ .++.++|||||||++|+|++|..|+.... ...+...+...... +
T Consensus 314 ~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~ 393 (461)
T PHA03211 314 WSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFP 393 (461)
T ss_pred cccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCC
Confidence 2 1223579999999999864 48999999999999999999876653321 22333333322211 0
Q ss_pred -----------------------CCCCC---CCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcccc
Q 010013 289 -----------------------SSDPW---PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 289 -----------------------~~~~~---~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
....| ..++..+.+||.+||+.||.+|||+.|+|+||||+.
T Consensus 394 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 394 QHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred CCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 00111 135668999999999999999999999999999963
|
|
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-42 Score=332.96 Aligned_cols=256 Identities=26% Similarity=0.388 Sum_probs=212.2
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 147 (520)
.|.+.+.||+|+||.||++.+..++..+|+|.+.... .......+.+|+++++++. ||||+++++++..++.+++||
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~ 78 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI--KPAIRNQIIRELKVLHECN-SPYIVGFYGAFYSDGEISICM 78 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc--CHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEeeCCEEEEEe
Confidence 5899999999999999999999999999999876432 2334566889999999997 999999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCc
Q 010013 148 DLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226 (520)
Q Consensus 148 e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 226 (520)
||++|++|.+++...+.+++..+..++.|++.||.|||+ .+++|+||||+||+++ .++.++|+|||++...... .
T Consensus 79 ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~~-~ 154 (308)
T cd06615 79 EHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVN---SRGEIKLCDFGVSGQLIDS-M 154 (308)
T ss_pred eccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEe---cCCcEEEccCCCccccccc-c
Confidence 999999999999888889999999999999999999997 5999999999999994 4677999999998765332 2
Q ss_pred ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCC-----------------
Q 010013 227 FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDF----------------- 288 (520)
Q Consensus 227 ~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~----------------- 288 (520)
.....|++.|+|||.+.+ .++.++||||||+++|++++|..||...........+.......
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (308)
T cd06615 155 ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSP 234 (308)
T ss_pred cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCcc
Confidence 244578999999998864 47889999999999999999999997655433322221111000
Q ss_pred -----------------CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 289 -----------------SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 289 -----------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
+..+...++.++.+++.+||..+|++|||+.++++||||...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 235 RPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred chhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence 001112367889999999999999999999999999999764
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=331.91 Aligned_cols=257 Identities=31% Similarity=0.574 Sum_probs=220.1
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 147 (520)
.|.+.+.||+|+||.||++.+..+++.||+|.+...........+.+.+|+.+++.+. ||||+++++.+..++.+++||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAE-NPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCC-CCCeeeeEEEEecCCEEEEEE
Confidence 5889999999999999999999999999999987554333344567889999999998 999999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC--
Q 010013 148 DLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD-- 225 (520)
Q Consensus 148 e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-- 225 (520)
||++|++|.+++...+.+++..+..++.|++.||.|||++|++||||||+||++ +.++.++|+|||+++......
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll---~~~~~~~l~dfg~~~~~~~~~~~ 157 (305)
T cd05609 81 EYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLI---TSMGHIKLTDFGLSKIGLMSLTT 157 (305)
T ss_pred ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEE---CCCCCEEEeeCCCccccCcCccc
Confidence 999999999999888889999999999999999999999999999999999999 456789999999886421100
Q ss_pred --------------cccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCC
Q 010013 226 --------------VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSS 290 (520)
Q Consensus 226 --------------~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~ 290 (520)
......++..|+|||.+. ..++.++||||||+++|++++|..||.+....+....+.......+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 237 (305)
T cd05609 158 NLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPE 237 (305)
T ss_pred cccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCC
Confidence 011235788899999875 45889999999999999999999999988887777777766544443
Q ss_pred CCCCCCCHHHHHHHHHhcccCCCCCCC---HHHHHcCCcccc
Q 010013 291 DPWPNISSSAKDIVKKMLHADPKERLS---AAEVLNHPWMRV 329 (520)
Q Consensus 291 ~~~~~~~~~~~~li~~~l~~dp~~Rps---~~~~l~~~~~~~ 329 (520)
.. ..++..+.++|.+||+.+|++||+ +.++|+||||..
T Consensus 238 ~~-~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~ 278 (305)
T cd05609 238 GD-EALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLG 278 (305)
T ss_pred cc-ccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccC
Confidence 32 267899999999999999999997 799999999965
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-42 Score=343.35 Aligned_cols=260 Identities=28% Similarity=0.455 Sum_probs=209.7
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC---
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--- 140 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~--- 140 (520)
.+.++|.+.+.||+|+||.||+|.+..+++.||+|++..... .....+.+.+|+.+++++. ||||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~ 89 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQ-SLIHARRTYRELRLLKHMK-HENVIGLLDVFTPATSI 89 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhh-hhHHHHHHHHHHHHHHhcC-CCchhhhhhhhcccccc
Confidence 456789999999999999999999999999999999864321 2233456778999999998 99999999887543
Q ss_pred ---CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccc
Q 010013 141 ---HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (520)
Q Consensus 141 ---~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~ 217 (520)
...|++++++ +++|.+++. .+.+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||+
T Consensus 90 ~~~~~~~~~~~~~-~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~---~~~~~kl~Dfg~ 164 (343)
T cd07878 90 ENFNEVYLVTNLM-GADLNNIVK-CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVN---EDCELRILDFGL 164 (343)
T ss_pred cccCcEEEEeecC-CCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEEC---CCCCEEEcCCcc
Confidence 4578999988 778877664 45799999999999999999999999999999999999994 567899999999
Q ss_pred ccccCCCCcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC---------
Q 010013 218 SVFFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI--------- 286 (520)
Q Consensus 218 a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~--------- 286 (520)
+..... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+.....
T Consensus 165 ~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (343)
T cd07878 165 ARQADD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKK 242 (343)
T ss_pred ceecCC--CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 987543 2344578999999998864 478899999999999999999999987665444433322100
Q ss_pred --------------CCCC----CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 287 --------------DFSS----DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 287 --------------~~~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
..+. ..+...++.+.+||.+||..||++|||+.++|+||||.....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~~ 306 (343)
T cd07878 243 ISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYHD 306 (343)
T ss_pred cchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccCC
Confidence 0000 011245677899999999999999999999999999976443
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-42 Score=340.33 Aligned_cols=250 Identities=24% Similarity=0.370 Sum_probs=200.1
Q ss_pred ccceeecceeeccCCeEEEEEEEc-----CCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHK-----DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~ 140 (520)
.++|.+.+.||+|+||.||+|.+. .++..||+|++.... .....+.+.+|+.++.++..||||+++++++...
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA--TASEHKALMSELKILIHIGNHLNVVNLLGACTKP 83 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc--chHHHHHHHHHHHHHHHhccCcceeeEEeEecCC
Confidence 467999999999999999999853 345689999986432 2234567889999999995599999999988754
Q ss_pred -CeEEEEEeccCCCchHHHHHhc---------------------------------------------------------
Q 010013 141 -HSVNLIMDLCAGGELFDRIIAK--------------------------------------------------------- 162 (520)
Q Consensus 141 -~~~~lv~e~~~g~~L~~~l~~~--------------------------------------------------------- 162 (520)
..+++||||+++|+|.+++...
T Consensus 84 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (338)
T cd05102 84 NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQET 163 (338)
T ss_pred CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhc
Confidence 4689999999999999988642
Q ss_pred -----CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCc---ccccccCC
Q 010013 163 -----GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSA 234 (520)
Q Consensus 163 -----~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~ 234 (520)
.++++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++....... .....+++
T Consensus 164 ~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~---~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~ 240 (338)
T cd05102 164 DDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKDPDYVRKGSARLPL 240 (338)
T ss_pred cccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEc---CCCcEEEeecccccccccCcchhcccCCCCCc
Confidence 2477888999999999999999999999999999999994 567899999999986533221 12234567
Q ss_pred CccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccC
Q 010013 235 YYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQ-SIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311 (520)
Q Consensus 235 ~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d 311 (520)
.|+|||++. ..++.++|||||||++|+|++ |..||.+.... .....+..+.... ....+++.+.+++.+||+.|
T Consensus 241 ~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~d 317 (338)
T cd05102 241 KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMR---APENATPEIYRIMLACWQGD 317 (338)
T ss_pred cccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCC---CCCCCCHHHHHHHHHHccCC
Confidence 899999875 458999999999999999997 99999875533 3333333332211 12467899999999999999
Q ss_pred CCCCCCHHHHHc
Q 010013 312 PKERLSAAEVLN 323 (520)
Q Consensus 312 p~~Rps~~~~l~ 323 (520)
|++|||+.++++
T Consensus 318 p~~RPs~~el~~ 329 (338)
T cd05102 318 PKERPTFSALVE 329 (338)
T ss_pred hhhCcCHHHHHH
Confidence 999999999976
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=329.76 Aligned_cols=259 Identities=27% Similarity=0.486 Sum_probs=216.5
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
...+|.+.+.||+|+||.||+|.+..+++.+|+|.+..... ...+.+.+|+.+++.+. ||||+++++.+......+
T Consensus 18 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~---~~~~~~~~e~~~l~~~~-h~~v~~~~~~~~~~~~~~ 93 (296)
T cd06654 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMRENK-NPNIVNYLDSYLVGDELW 93 (296)
T ss_pred cccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhCC-CCCEeeEEEEEEeCCEEE
Confidence 44689999999999999999999999999999998865332 23467889999999997 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
+||||++|++|.+++.. ..+++..+..++.|++.||.|||+.||+||||||+||++ +.++.++|+|||++......
T Consensus 94 lv~e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill---~~~~~~kl~dfg~~~~~~~~ 169 (296)
T cd06654 94 VVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPE 169 (296)
T ss_pred EeecccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---cCCCCEEECccccchhcccc
Confidence 99999999999998754 468999999999999999999999999999999999999 45678999999998865433
Q ss_pred C-cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHH
Q 010013 225 D-VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (520)
Q Consensus 225 ~-~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (520)
. ......|++.|+|||.+.+ .++.++|||||||++|+|++|+.||...........+...... .......++..+.+
T Consensus 170 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~ 248 (296)
T cd06654 170 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP-ELQNPEKLSAIFRD 248 (296)
T ss_pred ccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCC-CCCCccccCHHHHH
Confidence 2 1233578899999998865 4789999999999999999999999887664443333322211 11122467889999
Q ss_pred HHHHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 303 IVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 303 li~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
++.+||..+|++|||+.++++||||.....
T Consensus 249 li~~~l~~~p~~Rpt~~eil~~~~~~~~~~ 278 (296)
T cd06654 249 FLNRCLDMDVEKRGSAKELLQHQFLKIAKP 278 (296)
T ss_pred HHHHHCcCCcccCcCHHHHhhChhhhccCC
Confidence 999999999999999999999999986543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-42 Score=337.36 Aligned_cols=249 Identities=27% Similarity=0.471 Sum_probs=192.8
Q ss_pred cceeeccCCeEEEEEEEcC--CCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe--CCeEEEEE
Q 010013 72 GRELGRGQFGVTYLVTHKD--TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED--RHSVNLIM 147 (520)
Q Consensus 72 ~~~lg~G~~g~Vy~~~~~~--~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~--~~~~~lv~ 147 (520)
+++||+|+||.||+|.++. +++.+|+|.+.... ....+.+|+.+++++. ||||+++++++.. ...++++|
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-----ISMSACREIALLRELK-HPNVISLQKVFLSHADRKVWLLF 79 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC-----CcHHHHHHHHHHHhcC-CCCCcceeeeEecCCCcEEEEEE
Confidence 4689999999999999763 57889999886432 2245778999999998 9999999998854 56789999
Q ss_pred eccCCCchHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecC-CCCCCeeEeeccc
Q 010013 148 DLCAGGELFDRIIAK---------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSS-AEDSPLKATDFGL 217 (520)
Q Consensus 148 e~~~g~~L~~~l~~~---------~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~-~~~~~~kl~Dfg~ 217 (520)
||+. ++|.+.+... ..+++..+..++.||+.||.|||++||+||||||+|||+... +..+.+||+|||+
T Consensus 80 e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07868 80 DYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred eccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCc
Confidence 9985 5787776532 248999999999999999999999999999999999999643 3456899999999
Q ss_pred ccccCCCC----cccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHH---------HHHHHHH
Q 010013 218 SVFFKPGD----VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQ---------SIFDAIL 282 (520)
Q Consensus 218 a~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~---------~~~~~~~ 282 (520)
++...... ......||+.|+|||++.+ .++.++||||+||++|+|++|++||...... .....+.
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~ 238 (317)
T cd07868 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIF 238 (317)
T ss_pred eeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHH
Confidence 98764321 2234678999999998854 4789999999999999999999999654321 1111111
Q ss_pred cCCCC--------------------------CC--------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 283 RGHID--------------------------FS--------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 283 ~~~~~--------------------------~~--------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
..... .. .......+..+.+||.+||+.||++|||++|+|+||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 239 NVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred HhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 10000 00 00001235678899999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-42 Score=329.41 Aligned_cols=254 Identities=30% Similarity=0.459 Sum_probs=207.2
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 147 (520)
+|.+.+.||+|++|.||+|.++.++..||+|.+..... .....+.+.+|+.+++++. ||||+++++++.++..+++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~ 78 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESE-EEGVPSTAIREISLLKELQ-HPNIVCLQDVLMQESRLYLIF 78 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccc-cCCchHHHHHHHHHHHhcC-CCCEeeeEEEEeeCCeEEEEE
Confidence 48889999999999999999999999999999864322 2233467889999999998 999999999999999999999
Q ss_pred eccCCCchHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 148 DLCAGGELFDRIIAK---GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 148 e~~~g~~L~~~l~~~---~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
||++ ++|.+++... ..+++..++.++.||+.||.|||+.|++|+||||+||+++ .++.++|+|||++......
T Consensus 79 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~~ 154 (285)
T cd07861 79 EFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLID---NKGVIKLADFGLARAFGIP 154 (285)
T ss_pred ecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEc---CCCcEEECcccceeecCCC
Confidence 9997 5888877542 4689999999999999999999999999999999999994 5678999999998765322
Q ss_pred C-cccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC---------------
Q 010013 225 D-VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI--------------- 286 (520)
Q Consensus 225 ~-~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~--------------- 286 (520)
. ......+++.|+|||++.+ .++.++|||||||++|+|++|+.||.+.........+.....
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (285)
T cd07861 155 VRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPD 234 (285)
T ss_pred cccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHH
Confidence 2 2233467889999998754 368899999999999999999999987665433322211100
Q ss_pred ----------CCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 287 ----------DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 287 ----------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
.........+++++.++|.+||..||++|||+.++++||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 235 YKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred HHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 00011124578999999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-42 Score=327.15 Aligned_cols=254 Identities=28% Similarity=0.470 Sum_probs=211.0
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.++|.+.+.||+|+||.||+|.++.+++.+|+|++.... ......+.+|+.+++++. ||||+++++++...+.+++
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~~e~~~l~~~~-h~~ii~~~~~~~~~~~~~i 83 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP---GDDFSLIQQEIFMVKECK-HCNIVAYFGSYLSREKLWI 83 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc---cchHHHHHHHHHHHHhcC-CCCeeeeeEEEEeCCEEEE
Confidence 467999999999999999999999999999999986432 233456889999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
||||+++++|.+++...+.+++..+..++.|++.||.|||+.||+||||+|+||++ +.++.++|+|||++.......
T Consensus 84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill---~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06646 84 CMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILL---TDNGDVKLADFGVAAKITATI 160 (267)
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---CCCCCEEECcCccceeecccc
Confidence 99999999999999888889999999999999999999999999999999999999 456679999999998764322
Q ss_pred -cccccccCCCccCchhhc----ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCC-CCCCCCCHH
Q 010013 226 -VFKDLVGSAYYVAPEVLR----RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSS-DPWPNISSS 299 (520)
Q Consensus 226 -~~~~~~gt~~y~aPE~~~----~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 299 (520)
......|++.|+|||.+. ..++.++|||||||++|+|++|..||...........+.......+. .....++..
T Consensus 161 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (267)
T cd06646 161 AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSST 240 (267)
T ss_pred cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHH
Confidence 223456889999999873 33678999999999999999999999665543332222222222111 111356889
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHcCCc
Q 010013 300 AKDIVKKMLHADPKERLSAAEVLNHPW 326 (520)
Q Consensus 300 ~~~li~~~l~~dp~~Rps~~~~l~~~~ 326 (520)
+.+++.+||..+|++|||++++|+|+|
T Consensus 241 ~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 241 FHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred HHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 999999999999999999999999987
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=327.21 Aligned_cols=256 Identities=29% Similarity=0.499 Sum_probs=215.3
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 147 (520)
.|.+.+.||+|+||.||+|.+..++..+++|.+... .....+.+.+|+.+++.+. ||||+++++++...+..++||
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~-h~~ii~~~~~~~~~~~~~~v~ 81 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK---SEEELEDYMVEIDILASCD-HPNIVKLLDAFYYENNLWILI 81 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC---CHHHHHHHHHHHHHHHHCC-CCCeeeEEEEEeeCCEEEEEE
Confidence 478889999999999999999999999999988543 2344567889999999998 999999999999999999999
Q ss_pred eccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC-C
Q 010013 148 DLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG-D 225 (520)
Q Consensus 148 e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~-~ 225 (520)
||+++++|...+.+ ..++++..+..++.|++.||.|||+.|++||||||+||+++ .++.++|+|||++...... .
T Consensus 82 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~---~~~~~kl~dfg~~~~~~~~~~ 158 (282)
T cd06643 82 EFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFT---LDGDIKLADFGVSAKNTRTIQ 158 (282)
T ss_pred EecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEc---cCCCEEEcccccccccccccc
Confidence 99999999887765 45799999999999999999999999999999999999994 5677999999998765322 1
Q ss_pred cccccccCCCccCchhhc------ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHH
Q 010013 226 VFKDLVGSAYYVAPEVLR------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (520)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~------~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (520)
......+++.|+|||++. ..++.++|||||||++|+|++|.+||...........+......... ....++..
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 237 (282)
T cd06643 159 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLA-QPSRWSSE 237 (282)
T ss_pred ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCC-CccccCHH
Confidence 223456899999999873 23678999999999999999999999887766665555544332211 12357899
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 300 AKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 300 ~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
+.++|.+||+.+|++|||+.++++||||....
T Consensus 238 ~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 269 (282)
T cd06643 238 FKDFLKKCLEKNVDARWTTTQLLQHPFVTVNS 269 (282)
T ss_pred HHHHHHHHccCChhhCcCHHHHhcCCCEeccC
Confidence 99999999999999999999999999998643
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=327.75 Aligned_cols=241 Identities=18% Similarity=0.248 Sum_probs=206.2
Q ss_pred ceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe----CCeEEEEEe
Q 010013 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED----RHSVNLIMD 148 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~----~~~~~lv~e 148 (520)
..||+|++|.||+|.+ +|+.||+|.+...........+.+.+|+.+|++++ ||||+++++++.+ ...+++|||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~~~g~~~~~~~~~~~~~lv~E 102 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRID-SNNILKIYGFIIDIVDDLPRLSLILE 102 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcC-CCCEEEEeeeEEecccCCCceEEEEE
Confidence 5689999999999998 57899999987654333333577889999999998 9999999999876 457899999
Q ss_pred ccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHc-CCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCcc
Q 010013 149 LCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM-GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF 227 (520)
Q Consensus 149 ~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~ 227 (520)
|++||+|.+++.+.+.+++.....++.|++.||.|||+. +++||||||+||++ +.++.+||+|||+++......
T Consensus 103 y~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill---~~~~~~kl~dfg~~~~~~~~~-- 177 (283)
T PHA02988 103 YCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLV---TENYKLKIICHGLEKILSSPP-- 177 (283)
T ss_pred eCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEE---CCCCcEEEcccchHhhhcccc--
Confidence 999999999998888899999999999999999999984 99999999999999 456789999999988654322
Q ss_pred cccccCCCccCchhhcc---cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Q 010013 228 KDLVGSAYYVAPEVLRR---NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (520)
Q Consensus 228 ~~~~gt~~y~aPE~~~~---~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (520)
....|++.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+......+..+ ..++..+.+++
T Consensus 178 ~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~~l~~li 255 (283)
T PHA02988 178 FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLP--LDCPLEIKCIV 255 (283)
T ss_pred ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCC--CcCcHHHHHHH
Confidence 23468899999999864 58999999999999999999999999888877777776554443321 25789999999
Q ss_pred HHhcccCCCCCCCHHHHHc
Q 010013 305 KKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 305 ~~~l~~dp~~Rps~~~~l~ 323 (520)
.+||+.||++|||+.++++
T Consensus 256 ~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 256 EACTSHDSIKRPNIKEILY 274 (283)
T ss_pred HHHhcCCcccCcCHHHHHH
Confidence 9999999999999999985
|
|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-43 Score=365.36 Aligned_cols=259 Identities=31% Similarity=0.534 Sum_probs=231.4
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
-+++|.+.+.||+|+||.|.+++++.|++.||.|++.+-.......-..|+.|-.+|.... .+-|+.+.-.|.++.++|
T Consensus 73 ~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~n-s~Wiv~LhyAFQD~~~LY 151 (1317)
T KOG0612|consen 73 KAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGN-SEWIVQLHYAFQDERYLY 151 (1317)
T ss_pred CHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCC-cHHHHHHHHHhcCccceE
Confidence 4578999999999999999999999999999999998755554455677889999998877 899999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
+||||++||+|..++.+..++++..+..++..|+.||.-||+.|+|||||||+|||+ +..|++||+|||.+..+...
T Consensus 152 lVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLl---d~~GHikLADFGsClkm~~d 228 (1317)
T KOG0612|consen 152 LVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLL---DKSGHIKLADFGSCLKMDAD 228 (1317)
T ss_pred EEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEe---cccCcEeeccchhHHhcCCC
Confidence 999999999999999998899999999999999999999999999999999999999 67899999999999887644
Q ss_pred C--cccccccCCCccCchhhc------ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCC
Q 010013 225 D--VFKDLVGSAYYVAPEVLR------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG--HIDFSSDPWP 294 (520)
Q Consensus 225 ~--~~~~~~gt~~y~aPE~~~------~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~ 294 (520)
. .....+|||.|.|||++. +.|++.+|.||+||++|||+.|..||...+--+.+.+|+.- .+.|| .-.
T Consensus 229 G~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP--~~~ 306 (1317)
T KOG0612|consen 229 GTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFP--DET 306 (1317)
T ss_pred CcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCC--ccc
Confidence 3 234568999999999984 35899999999999999999999999999999999999876 45555 234
Q ss_pred CCCHHHHHHHHHhcccCCCCCCC---HHHHHcCCccccC
Q 010013 295 NISSSAKDIVKKMLHADPKERLS---AAEVLNHPWMRVD 330 (520)
Q Consensus 295 ~~~~~~~~li~~~l~~dp~~Rps---~~~~l~~~~~~~~ 330 (520)
.+|+++++||.+++. +|+.|.. ++++..||||...
T Consensus 307 ~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~ 344 (1317)
T KOG0612|consen 307 DVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGI 344 (1317)
T ss_pred ccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCC
Confidence 699999999999995 7889998 9999999999864
|
|
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-41 Score=324.53 Aligned_cols=251 Identities=31% Similarity=0.530 Sum_probs=213.1
Q ss_pred ceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 010013 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~g 152 (520)
+.||+|+||.||+|.+..+++.+|+|.+.+...........+..|..++.....|||++++++++..++.+++||||++|
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 57999999999999999999999999986544322333344556666655554599999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCccccccc
Q 010013 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVG 232 (520)
Q Consensus 153 ~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~g 232 (520)
++|.+++...+.+++..+..++.|++.||.|||+.|++|+||+|+||+++ .++.++|+|||++..... .....|
T Consensus 82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~---~~~~~~ 155 (260)
T cd05611 82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLID---QTGHLKLTDFGLSRNGLE---NKKFVG 155 (260)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCcEEEeecccceeccc---cccCCC
Confidence 99999998888899999999999999999999999999999999999994 567799999999876432 234568
Q ss_pred CCCccCchhhccc-CCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccC
Q 010013 233 SAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311 (520)
Q Consensus 233 t~~y~aPE~~~~~-~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d 311 (520)
++.|+|||.+.+. ++.++||||||+++|+|++|..||...........+......++......+++.+.+++.+||..+
T Consensus 156 ~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 235 (260)
T cd05611 156 TPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMD 235 (260)
T ss_pred CcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCC
Confidence 8899999988654 788999999999999999999999888887777777766655554444578999999999999999
Q ss_pred CCCCCC---HHHHHcCCcccc
Q 010013 312 PKERLS---AAEVLNHPWMRV 329 (520)
Q Consensus 312 p~~Rps---~~~~l~~~~~~~ 329 (520)
|++||| +.|+|+||||..
T Consensus 236 p~~R~~~~~~~~~l~~~~~~~ 256 (260)
T cd05611 236 PAKRLGANGYQEIKSHPFFKS 256 (260)
T ss_pred HHHccCCCcHHHHHcChHhhc
Confidence 999994 579999999964
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-41 Score=321.72 Aligned_cols=252 Identities=24% Similarity=0.466 Sum_probs=217.4
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 147 (520)
.|.+.+.||+|++|.||+|.++.+++.+++|.+..... .....+.+.+|+.++++++ ||||+++++++...+..++||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKM-NRREREEAIDEARVLAKLD-SSYIIRYYESFLDKGKLNIVM 78 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhC-CHHHHHHHHHHHHHHHhcC-CCCeehheeeeccCCEEEEEE
Confidence 37888999999999999999999999999999865433 2345677889999999998 999999999999999999999
Q ss_pred eccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 148 DLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 148 e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
||++|++|.+++... ..+++..+..++.|++.||.|||+.|++|+||||+||+++ .++.++|+|||++.......
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~---~~~~~~l~df~~~~~~~~~~ 155 (256)
T cd08529 79 EYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLD---AYDNVKIGDLGVAKLLSDNT 155 (256)
T ss_pred EeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEe---CCCCEEEcccccceeccCcc
Confidence 999999999998764 5689999999999999999999999999999999999995 46779999999988765433
Q ss_pred c-ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHH
Q 010013 226 V-FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (520)
Q Consensus 226 ~-~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (520)
. .....|++.|+|||++.+ .++.++||||||+++++|++|+.||...........+..+...... ..++..+.++
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 232 (256)
T cd08529 156 NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVS---QMYSQQLAQL 232 (256)
T ss_pred chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCc---cccCHHHHHH
Confidence 2 234568899999998864 4788999999999999999999999888877777766665433221 2578899999
Q ss_pred HHHhcccCCCCCCCHHHHHcCCcc
Q 010013 304 VKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 304 i~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
+.+||+.+|++||++.++++|||+
T Consensus 233 i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 233 IDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred HHHHccCCcccCcCHHHHhhCCCC
Confidence 999999999999999999999995
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=324.40 Aligned_cols=255 Identities=29% Similarity=0.479 Sum_probs=215.7
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+++.||.|+||+||+|....++..+|+|++...... ...+.+.+|+.+++.+. |+||+++++.+...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~iv 77 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQ--TSVDELRKEVQAMSQCN-HPNVVKYYTSFVVGDELWLV 77 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcc--hHHHHHHHHHHHHHhcC-CCCEEEEEEEEeeCCEEEEE
Confidence 3689999999999999999999888999999998644322 25677899999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 147 MDLCAGGELFDRIIAK---GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~---~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
||+++|++|.+.+... ..+++..+..++.|++.||.+||+.|++|+||+|+||+++ +++.++|+|||++.....
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~---~~~~~~l~df~~~~~~~~ 154 (267)
T cd06610 78 MPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLG---EDGSVKIADFGVSASLAD 154 (267)
T ss_pred EeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEc---CCCCEEEcccchHHHhcc
Confidence 9999999999998764 4589999999999999999999999999999999999994 567799999999877654
Q ss_pred CCcc-----cccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCC--CCC
Q 010013 224 GDVF-----KDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD--PWP 294 (520)
Q Consensus 224 ~~~~-----~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~ 294 (520)
.... ....|+..|+|||.+.. .++.++|+|||||++|+|++|+.||...................... .+.
T Consensus 155 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (267)
T cd06610 155 GGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYK 234 (267)
T ss_pred CccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccc
Confidence 3221 33468899999998754 48889999999999999999999998877665555554443221111 124
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 295 NISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 295 ~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
.+++.+.+++.+||..||++|||+.++++||||
T Consensus 235 ~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 235 KYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred cccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 678999999999999999999999999999997
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=329.93 Aligned_cols=263 Identities=29% Similarity=0.493 Sum_probs=217.5
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
+...+|.+.+.||+|+||.||+|.+..+++.||+|.+..... ...+.+.+|+.+++.+. ||||+++++++..++..
T Consensus 16 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~ 91 (297)
T cd06656 16 DPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ---PKKELIINEILVMRENK-NPNIVNYLDSYLVGDEL 91 (297)
T ss_pred ChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc---chHHHHHHHHHHHHhCC-CCCEeeEEEEEecCCEE
Confidence 345789999999999999999999998999999999864332 23466889999999998 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
++||||+++++|.+++.+ ..+++..+..++.|++.||.|||+.|++||||||+||++ +.++.++|+|||++.....
T Consensus 92 ~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili---~~~~~~~l~Dfg~~~~~~~ 167 (297)
T cd06656 92 WVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITP 167 (297)
T ss_pred EEeecccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEECcCccceEccC
Confidence 999999999999998754 468999999999999999999999999999999999999 4567899999999887543
Q ss_pred CCc-ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHH
Q 010013 224 GDV-FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (520)
Q Consensus 224 ~~~-~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (520)
... .....+++.|+|||.+.+ .++.++|||||||++|++++|..||.+.........+.....+ .......++..+.
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 246 (297)
T cd06656 168 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTP-ELQNPERLSAVFR 246 (297)
T ss_pred CccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCC-CCCCccccCHHHH
Confidence 322 233568899999998864 4789999999999999999999999876553332222222111 1112246788999
Q ss_pred HHHHHhcccCCCCCCCHHHHHcCCccccCCCCCC
Q 010013 302 DIVKKMLHADPKERLSAAEVLNHPWMRVDGDASD 335 (520)
Q Consensus 302 ~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~~~~ 335 (520)
+++.+||..+|++|||+.++++||||+.......
T Consensus 247 ~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~~ 280 (297)
T cd06656 247 DFLNRCLEMDVDRRGSAKELLQHPFLKLAKPLSS 280 (297)
T ss_pred HHHHHHccCChhhCcCHHHHhcCchhcccccccc
Confidence 9999999999999999999999999987655443
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-42 Score=351.97 Aligned_cols=253 Identities=29% Similarity=0.463 Sum_probs=211.5
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEE-EEEe--
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKG-AYED-- 139 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~-~~~~-- 139 (520)
+--.-+++|.+.|.+|||+.||+|.+...|..||+|++... ++..++.+.+|+.+|++|.+|+|||.++| ....
T Consensus 33 ~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~---de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~ 109 (738)
T KOG1989|consen 33 TVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN---DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRS 109 (738)
T ss_pred EECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC---CHHHHHHHHHHHHHHHHhcCCCceeeEecccccccc
Confidence 33345688899999999999999999988899999998533 56778899999999999999999999999 3321
Q ss_pred ----CCeEEEEEeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHcC--CeeecCCCCcEEeecCCCCCCee
Q 010013 140 ----RHSVNLIMDLCAGGELFDRIIA--KGHYSERAAANLCRQMVTVVHYCHSMG--VMHRDLKPENFLFSSSAEDSPLK 211 (520)
Q Consensus 140 ----~~~~~lv~e~~~g~~L~~~l~~--~~~l~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~k 211 (520)
...+.|+||||.||.|.+++.. ..+|++.++++|++++++|+.+||... |||||||-+|||++ .++++|
T Consensus 110 ~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls---~~g~~K 186 (738)
T KOG1989|consen 110 SNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLS---ADGNYK 186 (738)
T ss_pred CCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEc---CCCCEE
Confidence 1357799999999999999974 346999999999999999999999998 99999999999994 567899
Q ss_pred EeecccccccCCCC-cc---------cccccCCCccCchhhc----ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHH
Q 010013 212 ATDFGLSVFFKPGD-VF---------KDLVGSAYYVAPEVLR----RNYGAEADIWSAGVILYILLSGVPPFWGETEQSI 277 (520)
Q Consensus 212 l~Dfg~a~~~~~~~-~~---------~~~~gt~~y~aPE~~~----~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~ 277 (520)
|||||.+....... .. -....|+.|+|||++. ...+.|+|||||||+||-|+....||......
T Consensus 187 LCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l-- 264 (738)
T KOG1989|consen 187 LCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL-- 264 (738)
T ss_pred eCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce--
Confidence 99999987543221 11 1124699999999874 35899999999999999999999999876543
Q ss_pred HHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 278 FDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
.|..+.+.++.. +.++..+.+||..||++||++||++.|++.+-+-
T Consensus 265 --aIlng~Y~~P~~--p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~ 310 (738)
T KOG1989|consen 265 --AILNGNYSFPPF--PNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFE 310 (738)
T ss_pred --eEEeccccCCCC--ccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHH
Confidence 466777777653 6889999999999999999999999999876443
|
|
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-42 Score=327.04 Aligned_cols=252 Identities=32% Similarity=0.555 Sum_probs=217.5
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 147 (520)
.|.+.+.||.|+||.||+|.+..+++.+|+|++.+.........+.+.+|+++++++. ||||+++++++..+...++|+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 79 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELN-HPFLVNLWYSFQDEENMYLVV 79 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCC-CCChHHHHHhhcCCCeEEEEE
Confidence 4889999999999999999999899999999997655444455678999999999998 999999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCcc
Q 010013 148 DLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF 227 (520)
Q Consensus 148 e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~ 227 (520)
||+.|++|.+.+....++++..+..++.||+.||.|||++|++|+||+|+||+++ +++.++|+|||.+.........
T Consensus 80 e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~---~~~~~~l~d~~~~~~~~~~~~~ 156 (258)
T cd05578 80 DLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLD---EQGHVHITDFNIATKVTPDTLT 156 (258)
T ss_pred eCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEc---CCCCEEEeecccccccCCCccc
Confidence 9999999999998877899999999999999999999999999999999999994 5677999999999876554444
Q ss_pred cccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCH---HHHHHHHHcCCCCCCCCCCCCCCHHHHHH
Q 010013 228 KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETE---QSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (520)
Q Consensus 228 ~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (520)
....|+..|+|||.+.. .++.++|+||||+++|++++|..||..... ............ ...+.++..+.++
T Consensus 157 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 232 (258)
T cd05578 157 TSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADV----LYPATWSTEAIDA 232 (258)
T ss_pred cccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhccccc----cCcccCcHHHHHH
Confidence 55678889999999864 478999999999999999999999987763 333322222212 2224678999999
Q ss_pred HHHhcccCCCCCCCH--HHHHcCCcc
Q 010013 304 VKKMLHADPKERLSA--AEVLNHPWM 327 (520)
Q Consensus 304 i~~~l~~dp~~Rps~--~~~l~~~~~ 327 (520)
|.+||..||.+||++ .++++||||
T Consensus 233 i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 233 INKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred HHHHccCChhHcCCccHHHHhcCCCC
Confidence 999999999999999 999999998
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-41 Score=328.19 Aligned_cols=258 Identities=29% Similarity=0.487 Sum_probs=216.1
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
..+.|++.+.||.|+||.||+|.+..++..+++|.+... .....+.+.+|+.+++.+. ||||+++++.+..++..+
T Consensus 10 ~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 85 (292)
T cd06644 10 PNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYMVEIEILATCN-HPYIVKLLGAFYWDGKLW 85 (292)
T ss_pred cchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC---CHHHHHHHHHHHHHHHhCC-CCcEeeeEEEEEeCCeEE
Confidence 346799999999999999999999999999999998543 3344677889999999998 999999999999999999
Q ss_pred EEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 145 LIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
+||||++|++|...+.+ ...+++..+..++.|++.||.|||+.|++||||||+||+++ .++.++|+|||++.....
T Consensus 86 lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~kl~dfg~~~~~~~ 162 (292)
T cd06644 86 IMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLT---LDGDIKLADFGVSAKNVK 162 (292)
T ss_pred EEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEc---CCCCEEEccCccceeccc
Confidence 99999999999887755 45689999999999999999999999999999999999994 467799999999876432
Q ss_pred C-CcccccccCCCccCchhhc------ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCC
Q 010013 224 G-DVFKDLVGSAYYVAPEVLR------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (520)
Q Consensus 224 ~-~~~~~~~gt~~y~aPE~~~------~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (520)
. .......+++.|+|||++. ..++.++|||||||++|+|++|..||...........+.....+.. .....+
T Consensus 163 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 241 (292)
T cd06644 163 TLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTL-SQPSKW 241 (292)
T ss_pred cccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCccC-CCCccc
Confidence 2 1223456889999999873 2367889999999999999999999988776655555544332211 112467
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 297 SSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 297 ~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
+..+.++|.+||..+|++||++.++++||||...
T Consensus 242 ~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 275 (292)
T cd06644 242 SMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSV 275 (292)
T ss_pred CHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 8899999999999999999999999999999754
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=327.30 Aligned_cols=257 Identities=33% Similarity=0.507 Sum_probs=217.6
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.++|.+.+.||.|+||.||+|.+..++..+|+|.+... .....+.+.+|+.++++++ ||||+++++++..+...++
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l 79 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE---SEEELEDFMVEIDILSECK-HPNIVGLYEAYFYENKLWI 79 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC---CHHHHHHHHHHHHHHHhCC-CCceeEEEEEEecCCeEEE
Confidence 46799999999999999999999888999999998543 3344567889999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 146 IMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
||||+++++|.+++... ..+++..+..++.|++.||.|||+.||+|+||+|+||++ +.++.++|+|||++......
T Consensus 80 v~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili---~~~~~~~l~d~g~~~~~~~~ 156 (280)
T cd06611 80 LIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILL---TLDGDVKLADFGVSAKNKST 156 (280)
T ss_pred EeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE---CCCCCEEEccCccchhhccc
Confidence 99999999999988764 569999999999999999999999999999999999999 45678999999988765322
Q ss_pred C-cccccccCCCccCchhhc------ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 010013 225 D-VFKDLVGSAYYVAPEVLR------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (520)
Q Consensus 225 ~-~~~~~~gt~~y~aPE~~~------~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (520)
. ......+++.|+|||.+. ..++.++||||||+++|+|++|..||...........+.....+... ....++
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 235 (280)
T cd06611 157 LQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLD-QPSKWS 235 (280)
T ss_pred ccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcC-CcccCC
Confidence 2 223456889999999874 23677999999999999999999999887766666666554332211 123578
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 298 ~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
..+.++|.+||+.+|.+|||+.++|+||||...
T Consensus 236 ~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (280)
T cd06611 236 SSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ 268 (280)
T ss_pred HHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence 899999999999999999999999999999754
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-41 Score=320.50 Aligned_cols=252 Identities=25% Similarity=0.530 Sum_probs=212.9
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe-CCeEEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED-RHSVNLI 146 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~-~~~~~lv 146 (520)
.|.+.+.||.|++|.||++.++.+++.+|+|.+..... .....+.+.+|+.++++++ |||++++++.+.. ...++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~lv 78 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNA-SRRERKAAEQEAQLLSQLK-HPNIVAYRESWEGEDGLLYIV 78 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhc-CHHHHHHHHHHHHHHHhCC-CCCeeeeeeeecCCCCEEEEE
Confidence 48899999999999999999999999999999864332 2334567889999999998 9999999988764 4568999
Q ss_pred EeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 147 MDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
|||+++++|.+++... ..+++..+..++.|++.||.+||+.|++|+||||+||+++ .++.++|+|||++......
T Consensus 79 ~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~---~~~~~~l~df~~~~~~~~~ 155 (257)
T cd08223 79 MGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLT---RTNIIKVGDLGIARVLENQ 155 (257)
T ss_pred ecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEe---cCCcEEEecccceEEeccc
Confidence 9999999999988763 4589999999999999999999999999999999999994 5678999999998876432
Q ss_pred C-cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHH
Q 010013 225 D-VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (520)
Q Consensus 225 ~-~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (520)
. ......+++.|+|||++.+ .++.++||||||++++++++|+.||...........+..+.... ....+++.+.+
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 232 (257)
T cd08223 156 CDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPP---MPKDYSPELGE 232 (257)
T ss_pred CCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCC---CccccCHHHHH
Confidence 2 2234568899999998864 47889999999999999999999998877666666665544322 12467899999
Q ss_pred HHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 303 IVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 303 li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
++.+||..+|++|||+.++++||||
T Consensus 233 li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 233 LIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred HHHHHhccCcccCCCHHHHhcCCCC
Confidence 9999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-42 Score=327.71 Aligned_cols=251 Identities=31% Similarity=0.522 Sum_probs=209.0
Q ss_pred eeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCCCc
Q 010013 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGE 154 (520)
Q Consensus 75 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~g~~ 154 (520)
||+|+||+||+|.+..+|+.+|+|.+.............+..|+.++++++ ||||+++++++...+..|+||||+++++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVS-SRFIVSLAYAFETKDDLCLVMTLMNGGD 79 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCC-CCCEeeeeeEEecCCeEEEEEecCCCCc
Confidence 699999999999999999999999987544333334556778999999998 9999999999999999999999999999
Q ss_pred hHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCccccccc
Q 010013 155 LFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVG 232 (520)
Q Consensus 155 L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~g 232 (520)
|.+++...+ .+++..+..++.|++.||.|||+.|++||||+|+||++ +.++.++|+|||.+.............+
T Consensus 80 L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 156 (277)
T cd05577 80 LKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLL---DDHGNVRISDLGLAVELKGGKKIKGRAG 156 (277)
T ss_pred HHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEEccCcchhhhccCCccccccC
Confidence 999987765 69999999999999999999999999999999999999 4567899999999887654333344567
Q ss_pred CCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccC
Q 010013 233 SAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311 (520)
Q Consensus 233 t~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d 311 (520)
+..|+|||.+.+ .++.++||||||+++|+|++|+.||...........+............+.+++.+.++|.+||+.+
T Consensus 157 ~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 236 (277)
T cd05577 157 TPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKD 236 (277)
T ss_pred CCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHHHccCC
Confidence 889999998754 4788999999999999999999999776542222222222222222233467899999999999999
Q ss_pred CCCCC-----CHHHHHcCCcccc
Q 010013 312 PKERL-----SAAEVLNHPWMRV 329 (520)
Q Consensus 312 p~~Rp-----s~~~~l~~~~~~~ 329 (520)
|++|| ++.++++||||..
T Consensus 237 p~~R~~~~~~~~~~ll~h~~~~~ 259 (277)
T cd05577 237 PEKRLGCRGGSADEVREHPLFKD 259 (277)
T ss_pred hhHccCCCcccHHHHHhChhhhc
Confidence 99999 8999999999964
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-41 Score=323.12 Aligned_cols=254 Identities=27% Similarity=0.454 Sum_probs=211.0
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccC---CcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI---NRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~---~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
+|.+++.||+|+||.||+|... +++.+|+|.+...... .....+.+.+|+.++++++ |+||+++++++.+....+
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~ 78 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTN-QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLK-HVNIVQYLGTCLDDNTIS 78 (265)
T ss_pred CccccceEeccCCeEEEEEEEc-CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcC-CCCEeeEeeEeecCCeEE
Confidence 4788999999999999999874 6789999988643211 1223466889999999998 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC-
Q 010013 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP- 223 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~- 223 (520)
+||||++|++|.+++.+.+++++..+..++.|++.||.|||+.|++|+||+|+||+++ .++.++|+|||++.....
T Consensus 79 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~~ 155 (265)
T cd06631 79 IFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLM---PNGIIKLIDFGCARRLAWV 155 (265)
T ss_pred EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEEC---CCCeEEeccchhhHhhhhc
Confidence 9999999999999998888899999999999999999999999999999999999994 567899999999876421
Q ss_pred ------CCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCC
Q 010013 224 ------GDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (520)
Q Consensus 224 ------~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (520)
........|+..|+|||.+.+ .++.++||||||+++|+|++|..||...........+.......+. ....+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 234 (265)
T cd06631 156 GLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPR-LPDSF 234 (265)
T ss_pred cccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCC-CCCCC
Confidence 111233568899999999865 4788999999999999999999999876654444333332222221 22467
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 297 SSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 297 ~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
+..+.++|.+||..+|++||++.++|+||||
T Consensus 235 ~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 235 SAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred CHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 8999999999999999999999999999997
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-43 Score=329.88 Aligned_cols=259 Identities=29% Similarity=0.503 Sum_probs=226.8
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
+.|+..+.||+||||.||-++.+.||+.||+|.+.+..............|-.+|.+++ .+.||.+--.|+..+.+++|
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~-s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVS-SPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhc-cCcEEEEeeeecCCCceEEE
Confidence 56788899999999999999999999999999988766655555667789999999998 89999998899999999999
Q ss_pred EeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 147 MDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
+..|.||+|.=+|.+.+ .+++..+.-++.+|+.||.+||+.+||+|||||+|||+ ++.++++|+|+|+|..+..+
T Consensus 264 LtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILL---Dd~GhvRISDLGLAvei~~g 340 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILL---DDHGHVRISDLGLAVEIPEG 340 (591)
T ss_pred EEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheee---ccCCCeEeeccceEEecCCC
Confidence 99999999988887766 69999999999999999999999999999999999999 67899999999999999988
Q ss_pred CcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHH
Q 010013 225 DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (520)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (520)
......+||.+|||||+++. .|+...|.|||||++|+|+.|+.||.......-.+.+.+....-+......+|++++++
T Consensus 341 ~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~~kFS~eaksl 420 (591)
T KOG0986|consen 341 KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYSDKFSEEAKSL 420 (591)
T ss_pred CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcccccCHHHHHH
Confidence 88888899999999999974 59999999999999999999999998765543333333333333333335789999999
Q ss_pred HHHhcccCCCCCC-----CHHHHHcCCcccc
Q 010013 304 VKKMLHADPKERL-----SAAEVLNHPWMRV 329 (520)
Q Consensus 304 i~~~l~~dp~~Rp-----s~~~~l~~~~~~~ 329 (520)
++.+|+.||++|. .++++.+||||+.
T Consensus 421 c~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~ 451 (591)
T KOG0986|consen 421 CEGLLTKDPEKRLGCRGEGAQEVKEHPFFKD 451 (591)
T ss_pred HHHHHccCHHHhccCCCcCcchhhhCccccc
Confidence 9999999999998 5779999999985
|
|
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-41 Score=327.17 Aligned_cols=257 Identities=28% Similarity=0.504 Sum_probs=217.5
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
.+|.+.+.||.|++|.||+|.+..+++.+|+|.+.... ....+.+.+|+.+++.+. ||||+++++++...+.+++|
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 94 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQK---QPKKELIINEILVMKELK-NPNIVNFLDSFLVGDELFVV 94 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEeccc---CchHHHHHHHHHHHHhcC-CCceeeeeeeEecCceEEEE
Confidence 56999999999999999999999999999999885432 233567889999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCc
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 226 (520)
+||+++++|..++.. ..+++..+..++.|++.||.|||+.|++|+||||+||++ +.++.++|+|||++........
T Consensus 95 ~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili---~~~~~~kl~dfg~~~~~~~~~~ 170 (296)
T cd06655 95 MEYLAGGSLTDVVTE-TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLL---GMDGSVKLTDFGFCAQITPEQS 170 (296)
T ss_pred EEecCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEccCccchhcccccc
Confidence 999999999987754 468999999999999999999999999999999999999 4567899999999886543322
Q ss_pred -ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Q 010013 227 -FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (520)
Q Consensus 227 -~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (520)
.....+++.|+|||.+.+ .++.++|||||||++|++++|..||...........+....... ......++..+.++|
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li 249 (296)
T cd06655 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPE-LQNPEKLSPIFRDFL 249 (296)
T ss_pred cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcc-cCCcccCCHHHHHHH
Confidence 233468889999998864 48889999999999999999999998877655544444332221 122356789999999
Q ss_pred HHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 305 KKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 305 ~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
.+||..+|++|||+.+++.||||+....
T Consensus 250 ~~~l~~dp~~Rpt~~~il~~~~~~~~~~ 277 (296)
T cd06655 250 NRCLEMDVEKRGSAKELLQHPFLKLAKP 277 (296)
T ss_pred HHHhhcChhhCCCHHHHhhChHhhhccc
Confidence 9999999999999999999999986544
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-41 Score=320.88 Aligned_cols=253 Identities=25% Similarity=0.454 Sum_probs=217.5
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 147 (520)
+|.+.+.||+|+||.||++.+..+++.+|+|.+..... .....+.+.+|+.++++++ ||||+++++.+...+..++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQM-TKDERLAAQNECQVLKLLS-HPNIIEYYENFLEDKALMIVM 78 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEecccc-ccHHHHHHHHHHHHHhhCC-CCchhheeeeEecCCEEEEEE
Confidence 48889999999999999999999999999999875443 3344677899999999998 999999999999999999999
Q ss_pred eccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 148 DLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 148 e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
||+++++|.+++... ..+++..+..++.|++.||.|||++|++|+||+|+||+++. .+..++|+|||.+.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~--~~~~~~l~d~~~~~~~~~~~ 156 (256)
T cd08220 79 EYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDK--HKMVVKIGDFGISKILSSKS 156 (256)
T ss_pred ecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCEEEEccCCCceecCCCc
Confidence 999999999999764 35899999999999999999999999999999999999952 34568999999998775544
Q ss_pred cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Q 010013 226 VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (520)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (520)
......|+..|+|||.+.+ .++.++||||||+++|+|++|..||...........+....... ....++..+.+++
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li 233 (256)
T cd08220 157 KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAP---ISDRYSPDLRQLI 233 (256)
T ss_pred cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCC---CCCCcCHHHHHHH
Confidence 4444678899999999864 47889999999999999999999998877766666665543321 1235789999999
Q ss_pred HHhcccCCCCCCCHHHHHcCCcc
Q 010013 305 KKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 305 ~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
.+||..+|++|||+.++++||||
T Consensus 234 ~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 234 LSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred HHHccCChhhCCCHHHHhhCCCC
Confidence 99999999999999999999996
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-41 Score=322.92 Aligned_cols=249 Identities=33% Similarity=0.622 Sum_probs=214.2
Q ss_pred eeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCCCc
Q 010013 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGE 154 (520)
Q Consensus 75 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~g~~ 154 (520)
||.|++|.||+|.+..+++.+|+|++.+.........+.+.+|+.+++++. ||||+++++.+.++...++||||+++++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECN-HPFIVKLYRTFKDKKYIYMLMEYCLGGE 79 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCC-CCCEeeeeeeEEcCCccEEEEecCCCCc
Confidence 699999999999999889999999997655444455678999999999997 9999999999999999999999999999
Q ss_pred hHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCcccccccCC
Q 010013 155 LFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSA 234 (520)
Q Consensus 155 L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~ 234 (520)
|.+++.+...+++..+..++.||+.||.|||++|++|+||+|+||+++ .++.++|+|||.+.............|++
T Consensus 80 L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~---~~~~~~l~df~~~~~~~~~~~~~~~~~~~ 156 (262)
T cd05572 80 LWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLD---SNGYVKLVDFGFAKKLKSGQKTWTFCGTP 156 (262)
T ss_pred HHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEc---CCCCEEEeeCCcccccCcccccccccCCc
Confidence 999998888899999999999999999999999999999999999994 46789999999998775443333456889
Q ss_pred CccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCC--HHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccC
Q 010013 235 YYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGET--EQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311 (520)
Q Consensus 235 ~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d 311 (520)
.|+|||.+.. .++.++|+||+|+++|++++|..||.... .......+..+......+ ..++..+.++|.+||..+
T Consensus 157 ~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~l~~~ 234 (262)
T cd05572 157 EYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFP--NYIDKAAKDLIKQLLRRN 234 (262)
T ss_pred CccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCC--cccCHHHHHHHHHHccCC
Confidence 9999998754 58899999999999999999999998776 555566655322222211 244889999999999999
Q ss_pred CCCCCC-----HHHHHcCCcccc
Q 010013 312 PKERLS-----AAEVLNHPWMRV 329 (520)
Q Consensus 312 p~~Rps-----~~~~l~~~~~~~ 329 (520)
|++||+ +.|+++||||+.
T Consensus 235 p~~R~~~~~~~~~~l~~~~~~~~ 257 (262)
T cd05572 235 PEERLGNLKGGIKDIKKHKWFNG 257 (262)
T ss_pred hhhCcCCcccCHHHHhcChhhhC
Confidence 999999 999999999974
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-42 Score=330.58 Aligned_cols=254 Identities=27% Similarity=0.519 Sum_probs=205.5
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 147 (520)
+|.+.+.||+|+||.||+|.+..+|..+|+|.+..... .......+.+|+.+++++. ||||+++++++.+...+++|+
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~-~~~~~~~~~~ei~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 78 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELK-HKNIVRLYDVLHSDKKLTLVF 78 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccc-cccCccchhHHHHHHHhcC-CCCeeeHHHHhccCCceEEEE
Confidence 48889999999999999999999999999999865332 2223356778999999998 999999999999999999999
Q ss_pred eccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC-
Q 010013 148 DLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (520)
Q Consensus 148 e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~- 225 (520)
||+.+ +|.+.+.. .+.+++..+..++.||+.||.|||++|++||||||+||+++ .++.++|+|||++.......
T Consensus 79 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~---~~~~~~l~dfg~~~~~~~~~~ 154 (284)
T cd07839 79 EYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLIN---KNGELKLADFGLARAFGIPVR 154 (284)
T ss_pred ecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEc---CCCcEEECccchhhccCCCCC
Confidence 99964 78787765 46799999999999999999999999999999999999994 56779999999988654322
Q ss_pred cccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCC-CCCHHHHHHHHHcCCC--------------C-
Q 010013 226 VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFW-GETEQSIFDAILRGHI--------------D- 287 (520)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~-~~~~~~~~~~~~~~~~--------------~- 287 (520)
......+++.|+|||++.+ .++.++|||||||++|+|++|..||. +....+.+..+..... .
T Consensus 155 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07839 155 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDY 234 (284)
T ss_pred CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccc
Confidence 2234567889999998754 36889999999999999999988854 4443333333321100 0
Q ss_pred --CC--------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 288 --FS--------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 288 --~~--------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
++ ....+.+++.+.++|.+||+.||.+|||+.++++||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 235 KPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred cccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 00 01123578899999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-43 Score=342.36 Aligned_cols=252 Identities=27% Similarity=0.492 Sum_probs=213.3
Q ss_pred eeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCCC
Q 010013 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGG 153 (520)
Q Consensus 74 ~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~g~ 153 (520)
.||+|.||+||.|++..|...+|||.+..+ +....+-+..|+.+-++|+ |.|||+++|.+..+++.-|.||.++||
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpek---dsr~~QPLhEEIaLH~~Lr-HkNIVrYLGs~senGf~kIFMEqVPGG 657 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEK---DSREVQPLHEEIALHSTLR-HKNIVRYLGSVSENGFFKIFMEQVPGG 657 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccc---cchhhccHHHHHHHHHHHh-hHhHHHHhhccCCCCeEEEEeecCCCC
Confidence 489999999999999999999999998643 2345567889999999999 999999999999999999999999999
Q ss_pred chHHHHHhc-CCC--CHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC-cccc
Q 010013 154 ELFDRIIAK-GHY--SERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD-VFKD 229 (520)
Q Consensus 154 ~L~~~l~~~-~~l--~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~ 229 (520)
+|.++|..+ +++ .+.++..+.+||++||.|||++.|||||||-+|+|++. -.+.+||+|||.++.+..-. ...+
T Consensus 658 SLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNT--ySGvlKISDFGTsKRLAginP~TET 735 (1226)
T KOG4279|consen 658 SLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNT--YSGVLKISDFGTSKRLAGINPCTET 735 (1226)
T ss_pred cHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEee--ccceEEecccccchhhccCCccccc
Confidence 999998764 677 78889999999999999999999999999999999984 57889999999998875332 3456
Q ss_pred cccCCCccCchhhcc---cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHH
Q 010013 230 LVGSAYYVAPEVLRR---NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306 (520)
Q Consensus 230 ~~gt~~y~aPE~~~~---~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 306 (520)
+.||..|||||++.. .|+..+|||||||++.||.||++||........ ....-+.+..-++....++.+++.+|.+
T Consensus 736 FTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA-AMFkVGmyKvHP~iPeelsaeak~Filr 814 (1226)
T KOG4279|consen 736 FTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA-AMFKVGMYKVHPPIPEELSAEAKNFILR 814 (1226)
T ss_pred cccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH-hhhhhcceecCCCCcHHHHHHHHHHHHH
Confidence 889999999999852 499999999999999999999999965443221 1122233333333335778999999999
Q ss_pred hcccCCCCCCCHHHHHcCCccccCCC
Q 010013 307 MLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 307 ~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
|+.+||.+||++.++|++||++....
T Consensus 815 cFepd~~~R~sA~~LL~DpFlq~~~k 840 (1226)
T KOG4279|consen 815 CFEPDPCDRPSAKDLLQDPFLQHNNK 840 (1226)
T ss_pred HcCCCcccCccHHHhccCcccccCCC
Confidence 99999999999999999999987633
|
|
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-43 Score=340.24 Aligned_cols=257 Identities=25% Similarity=0.473 Sum_probs=223.4
Q ss_pred cce-eecceeeccCCeEEEEEEEcCCCcEEEEEEecccc-cCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe--
Q 010013 67 NTY-IFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRK-LINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS-- 142 (520)
Q Consensus 67 ~~y-~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~-~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~-- 142 (520)
++| ++...||+|+|-+||+|.+..+|..||--.++.+. ...+..++++..|+++|+.|. ||||+++|+++.+...
T Consensus 39 gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~-H~NIirfy~SW~d~~n~~ 117 (632)
T KOG0584|consen 39 GRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLK-HPNIIRFYDSWVDTDNKT 117 (632)
T ss_pred CceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCC-CCceeeeeeheecCCCce
Confidence 445 34578999999999999999999888864443322 234556799999999999999 9999999999987554
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcC--CeeecCCCCcEEeecCCCCCCeeEeecccccc
Q 010013 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG--VMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 220 (520)
+.+|+|++..|+|..++++.++++...+..|++||++||.|||++. |+|||||.+||+++ +..+.|||+|+|+|..
T Consensus 118 in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFin--G~~G~VKIGDLGLAtl 195 (632)
T KOG0584|consen 118 INFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVN--GNLGEVKIGDLGLATL 195 (632)
T ss_pred eeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEc--CCcCceeecchhHHHH
Confidence 8899999999999999999999999999999999999999999885 99999999999998 5678899999999998
Q ss_pred cCCCCcccccccCCCccCchhhcccCCCcchhHHHHHHHHHHhhCCCCCCC-CCHHHHHHHHHcCCCCCCCCCCCCCCHH
Q 010013 221 FKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWG-ETEQSIFDAILRGHIDFSSDPWPNISSS 299 (520)
Q Consensus 221 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~Dv~slG~~l~~ll~g~~pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (520)
...+.. ...+|||.|||||++...|+..+||||||+.++||+|+.+||.. .+...+++++..|..+-.....+ .++
T Consensus 196 ~r~s~a-ksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~--dPe 272 (632)
T KOG0584|consen 196 LRKSHA-KSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVK--DPE 272 (632)
T ss_pred hhcccc-ceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccC--CHH
Confidence 765543 34799999999999999999999999999999999999999954 56788899998887655443322 689
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 300 AKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 300 ~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
+++||.+||.. .++|||+.|+|+||||...
T Consensus 273 vr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 273 VREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred HHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 99999999999 8999999999999999875
|
|
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-41 Score=320.66 Aligned_cols=251 Identities=28% Similarity=0.476 Sum_probs=212.7
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+.+.||+|+||.||+|.+..+++.+++|.+.... ..+.+.+|+.+++++. ||||+++++++......|++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~l~ 76 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE-----DLQEIIKEISILKQCD-SPYIVKYYGSYFKNTDLWIV 76 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH-----HHHHHHHHHHHHHhCC-CCcEeeeeeeeecCCcEEEE
Confidence 57999999999999999999999889999999985432 1578999999999997 99999999999999999999
Q ss_pred EeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 147 MDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
+||+++++|.+++.. ...+++..+..++.|++.||.|||+.|++|+||+|+||+++ .++.++|+|||++.......
T Consensus 77 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~---~~~~~~l~dfg~~~~~~~~~ 153 (256)
T cd06612 77 MEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLN---EEGQAKLADFGVSGQLTDTM 153 (256)
T ss_pred EecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEC---CCCcEEEcccccchhcccCc
Confidence 999999999998865 45689999999999999999999999999999999999994 56679999999988765433
Q ss_pred -cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHH
Q 010013 226 -VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (520)
Q Consensus 226 -~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (520)
......++..|+|||++.+ .++.++||||||+++|+|++|+.||...........+....... ......++..+.++
T Consensus 154 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 232 (256)
T cd06612 154 AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPT-LSDPEKWSPEFNDF 232 (256)
T ss_pred cccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCC-CCchhhcCHHHHHH
Confidence 2233458889999999865 47889999999999999999999998766654443333222111 11123567899999
Q ss_pred HHHhcccCCCCCCCHHHHHcCCcc
Q 010013 304 VKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 304 i~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
+.+||+.+|++|||+.++|+||||
T Consensus 233 i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 233 VKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred HHHHHhcChhhCcCHHHHhcCCCC
Confidence 999999999999999999999997
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-41 Score=326.83 Aligned_cols=260 Identities=26% Similarity=0.411 Sum_probs=213.4
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+.+.||+|+||.||+|.+..++..+|+|.+... ........+.+|+.+++++. ||||+++++.+...+..++|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~--~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv 77 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLE--LDESKFNQIIMELDILHKAV-SPYIVDFYGAFFIEGAVYMC 77 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecc--cCHHHHHHHHHHHHHHHhcC-CCcHHhhhhheecCCeEEEE
Confidence 3688999999999999999999989999999988542 12334567889999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH-cCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 147 MDLCAGGELFDRIIAK---GHYSERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~---~~l~~~~~~~i~~qi~~~l~~LH~-~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
|||++|++|..++... ..+++..+..++.||+.||.|||+ .|++|+||||+||+++ .++.++|+|||++....
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~ 154 (286)
T cd06622 78 MEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVN---GNGQVKLCDFGVSGNLV 154 (286)
T ss_pred EeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEEC---CCCCEEEeecCCccccc
Confidence 9999999998887663 378999999999999999999997 5999999999999995 46779999999987653
Q ss_pred CCCcccccccCCCccCchhhcc-------cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCC
Q 010013 223 PGDVFKDLVGSAYYVAPEVLRR-------NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295 (520)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (520)
.. ......+++.|+|||.+.+ .++.++|||||||++|+|++|..||...........+............+.
T Consensus 155 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd06622 155 AS-LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSG 233 (286)
T ss_pred CC-ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcc
Confidence 32 2233467889999998743 247899999999999999999999977655444333222111111222345
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCCC
Q 010013 296 ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDA 333 (520)
Q Consensus 296 ~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~~ 333 (520)
++.++.++|.+||..+|++||++.++++||||......
T Consensus 234 ~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~~~ 271 (286)
T cd06622 234 YSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNA 271 (286)
T ss_pred cCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhccCC
Confidence 88999999999999999999999999999999866543
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-41 Score=320.82 Aligned_cols=254 Identities=28% Similarity=0.497 Sum_probs=208.6
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccC--CcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe--CCeE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI--NRDDVEDVRREVQIMHHLTGHRNIVELKGAYED--RHSV 143 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~--~~~~ 143 (520)
.|.+.+.||+|+||.||+|.+..++..+|+|.+...... .....+.+.+|+.++++++ ||||+++++++.. ....
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQ-HERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcC-CCCeeeEEEEEEcCCCCEE
Confidence 588899999999999999999999999999988643321 2233567889999999998 9999999998875 4678
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
++++||+++++|.+++...+.+++..+..++.|++.||.|||+.|++||||+|+||+++ .++.++|+|||++.....
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~---~~~~~~l~dfg~~~~~~~ 158 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRD---SAGNVKLGDFGASKRLQT 158 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC---CCCCEEEccCCCcccccc
Confidence 89999999999999998888899999999999999999999999999999999999994 566799999999876532
Q ss_pred C----CcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCH
Q 010013 224 G----DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298 (520)
Q Consensus 224 ~----~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (520)
. .......++..|+|||.+.+ .++.++|||||||++|+|++|+.||...........+...... ......+++
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 236 (266)
T cd06651 159 ICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTN--PQLPSHISE 236 (266)
T ss_pred ccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCC--CCCchhcCH
Confidence 1 11223468889999998864 4788999999999999999999999876554444333322211 111235678
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHcCCccc
Q 010013 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (520)
Q Consensus 299 ~~~~li~~~l~~dp~~Rps~~~~l~~~~~~ 328 (520)
.+.+++ +||..+|++|||++++++||||+
T Consensus 237 ~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 237 HARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred HHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 889998 67778999999999999999996
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-41 Score=323.43 Aligned_cols=250 Identities=24% Similarity=0.401 Sum_probs=206.9
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 147 (520)
+|.+.+.||+|+||.||+|.+..+++.+|+|.+.... .......+.+|+.+++++. ||||+++++++...+..++||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~ 78 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI--TVELQKQIMSELEILYKCD-SPYIIGFYGAFFVENRISICT 78 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC--ChHHHHHHHHHHHHHHhCC-CCCeeeEEEEEEECCEEEEEE
Confidence 5788899999999999999999999999999986432 2334467889999999998 999999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCcc
Q 010013 148 DLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF 227 (520)
Q Consensus 148 e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~ 227 (520)
||+++++|..+ ..+++..+..++.|++.||.|||+.||+|+||||+||+++ .++.++|+|||++...... ..
T Consensus 79 e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~---~~~~~~l~dfg~~~~~~~~-~~ 150 (279)
T cd06619 79 EFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVN---TRGQVKLCDFGVSTQLVNS-IA 150 (279)
T ss_pred ecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEEC---CCCCEEEeeCCcceecccc-cc
Confidence 99999998643 3578999999999999999999999999999999999994 5678999999999865432 23
Q ss_pred cccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCH-------HHHHHHHHcCCCCCCCCCCCCCCHH
Q 010013 228 KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETE-------QSIFDAILRGHIDFSSDPWPNISSS 299 (520)
Q Consensus 228 ~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (520)
....|+..|+|||++.+ .++.++||||||+++|+|++|..||..... ......+..... ........++.
T Consensus 151 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 228 (279)
T cd06619 151 KTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDP--PVLPVGQFSEK 228 (279)
T ss_pred cCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCC--CCCCCCcCCHH
Confidence 44578999999998864 588999999999999999999999965321 122222222211 11122457889
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 300 AKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 300 ~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
+.+++.+||+.+|++||+++++++||||...
T Consensus 229 ~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~ 259 (279)
T cd06619 229 FVHFITQCMRKQPKERPAPENLMDHPFIVQY 259 (279)
T ss_pred HHHHHHHHhhCChhhCCCHHHHhcCcccccc
Confidence 9999999999999999999999999999754
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-41 Score=323.34 Aligned_cols=259 Identities=25% Similarity=0.420 Sum_probs=212.6
Q ss_pred ccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC-
Q 010013 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR- 140 (520)
Q Consensus 62 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~- 140 (520)
.....++|.+.+.||+|+||.||+|....+++.+|+|++.... .....+.+|+.+++++.+|||++++++++...
T Consensus 17 ~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~ 92 (291)
T cd06639 17 LGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS----DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKAD 92 (291)
T ss_pred CCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc----cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEecc
Confidence 3345678999999999999999999999999999999985432 22356788999999996699999999988653
Q ss_pred ----CeEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeE
Q 010013 141 ----HSVNLIMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKA 212 (520)
Q Consensus 141 ----~~~~lv~e~~~g~~L~~~l~~----~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl 212 (520)
..+++||||++|++|.+++.. ...+++..+..++.|++.||.|||+.|++|+||||+||+++ .++.+||
T Consensus 93 ~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~---~~~~~kl 169 (291)
T cd06639 93 KLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLT---TEGGVKL 169 (291)
T ss_pred ccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEc---CCCCEEE
Confidence 468999999999999987753 45789999999999999999999999999999999999994 4667999
Q ss_pred eecccccccCCCC-cccccccCCCccCchhhcc------cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCC
Q 010013 213 TDFGLSVFFKPGD-VFKDLVGSAYYVAPEVLRR------NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH 285 (520)
Q Consensus 213 ~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~------~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~ 285 (520)
+|||++....... ......|+..|+|||.+.. .++.++|||||||++|+|++|+.||...........+....
T Consensus 170 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~ 249 (291)
T cd06639 170 VDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNP 249 (291)
T ss_pred eecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCC
Confidence 9999988754322 2233568889999998753 25789999999999999999999998876655555554433
Q ss_pred CCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccc
Q 010013 286 IDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (520)
Q Consensus 286 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~ 328 (520)
..... ....++..+.++|.+||+.+|++||++.++++||||+
T Consensus 250 ~~~~~-~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 250 PPTLL-HPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred CCCCC-cccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 22111 1235678899999999999999999999999999995
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-41 Score=317.32 Aligned_cols=252 Identities=29% Similarity=0.519 Sum_probs=218.8
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 147 (520)
+|++.+.||.|+||.||.+....+++.+++|.+..... .......+.+|+.++++++ |+||+++++++.+.+..+++|
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~~~ 78 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRL-SEKERRDALNEIVILSLLQ-HPNIIAYYNHFMDDNTLLIEM 78 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeeccc-chhHHHHHHHHHHHHHhCC-CCCeeEEEeEEecCCeEEEEE
Confidence 58899999999999999999999999999998864432 2344567889999999998 999999999999999999999
Q ss_pred eccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 148 DLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 148 e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
||+++++|.+.+.+. ..+++..+..++.|++.||.|||+.|++|+||+|+||+++ +++.+||+|||++.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~---~~~~~kl~d~~~~~~~~~~~ 155 (256)
T cd08221 79 EYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLT---KAGLIKLGDFGISKILGSEY 155 (256)
T ss_pred EecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEe---CCCCEEECcCcceEEccccc
Confidence 999999999998765 4689999999999999999999999999999999999995 46679999999988764333
Q ss_pred -cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHH
Q 010013 226 -VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (520)
Q Consensus 226 -~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (520)
......|++.|+|||.+.+ .++.++||||||+++|+|++|..||......+....+..+...... ..++..+.++
T Consensus 156 ~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 232 (256)
T cd08221 156 SMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVV---SVYSSELISL 232 (256)
T ss_pred ccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCc---cccCHHHHHH
Confidence 2344578999999998764 4788999999999999999999999988887777777765543322 5678999999
Q ss_pred HHHhcccCCCCCCCHHHHHcCCcc
Q 010013 304 VKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 304 i~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
+.+||..+|++|||+.++|+|+|+
T Consensus 233 i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 233 VHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred HHHHcccCcccCCCHHHHhhCcCC
Confidence 999999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-41 Score=321.71 Aligned_cols=256 Identities=27% Similarity=0.483 Sum_probs=211.9
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCC-------cccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN-------RDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-------~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~ 140 (520)
+|.+.+.||+|+||.||+|....+++.+|+|.+....... ....+.+.+|+.+++++. ||||+++++++...
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~ 80 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLD-HLNIVQYLGFETTE 80 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcC-CCCcceEEEEeccC
Confidence 4888999999999999999999899999999875321111 112356788999999998 99999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccc
Q 010013 141 HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (520)
Q Consensus 141 ~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 220 (520)
+..++||||+++++|.+++.+.+.+++..+..++.||+.||.|||+.|++||||+|+||+++ .++.++|+|||++..
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~---~~~~~~l~d~~~~~~ 157 (272)
T cd06629 81 EYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVD---ADGICKISDFGISKK 157 (272)
T ss_pred CceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEc---CCCeEEEeecccccc
Confidence 99999999999999999998888899999999999999999999999999999999999994 567899999999876
Q ss_pred cCCCC---cccccccCCCccCchhhcc---cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC--CCCCCCCC
Q 010013 221 FKPGD---VFKDLVGSAYYVAPEVLRR---NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG--HIDFSSDP 292 (520)
Q Consensus 221 ~~~~~---~~~~~~gt~~y~aPE~~~~---~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~--~~~~~~~~ 292 (520)
..... ......|+..|+|||.+.. .++.++|+||||+++|++++|..||...........+... ...++...
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (272)
T cd06629 158 SDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDV 237 (272)
T ss_pred ccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccc
Confidence 53211 1223467889999998753 3688999999999999999999999765554433333222 22233333
Q ss_pred CCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 293 ~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
.+.++..+.+++.+||.++|++|||+.++|+||||
T Consensus 238 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 238 SMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred cccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 35678999999999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-41 Score=332.06 Aligned_cols=254 Identities=23% Similarity=0.334 Sum_probs=202.7
Q ss_pred ecceeecc--CCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 010013 71 FGRELGRG--QFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMD 148 (520)
Q Consensus 71 ~~~~lg~G--~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e 148 (520)
+.+.||+| +|++||++.++.+|+.||+|.+..... .....+.+.+|+.+++.+. ||||+++++++..++..++|||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~-hpniv~~~~~~~~~~~~~lv~e 79 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC-TNEMVTFLQGELHVSKLFN-HPNIVPYRATFIADNELWVVTS 79 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhc-cHHHHHHHHHHHHHHHhcC-CCCeeeEEEEEEECCEEEEEEe
Confidence 46789999 789999999999999999999865432 2234466888999999998 9999999999999999999999
Q ss_pred ccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC-
Q 010013 149 LCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (520)
Q Consensus 149 ~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~- 225 (520)
|+++++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||+++ .++.++++||+.+.......
T Consensus 80 ~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~---~~~~~~l~~~~~~~~~~~~~~ 156 (327)
T cd08227 80 FMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILIS---VDGKVYLSGLRSNLSMINHGQ 156 (327)
T ss_pred ccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEe---cCCcEEEcccchhhccccccc
Confidence 99999999988653 4589999999999999999999999999999999999995 46679999998654332111
Q ss_pred -------cccccccCCCccCchhhcc---cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC------
Q 010013 226 -------VFKDLVGSAYYVAPEVLRR---NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS------ 289 (520)
Q Consensus 226 -------~~~~~~gt~~y~aPE~~~~---~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~------ 289 (520)
......++..|+|||++.+ .++.++|||||||++|+|++|..||..............+..+..
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (327)
T cd08227 157 RLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTI 236 (327)
T ss_pred cccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccch
Confidence 0112346778999999863 478999999999999999999999977654443333222211100
Q ss_pred ------------------------------------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcccc
Q 010013 290 ------------------------------------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 290 ------------------------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
......+++.+.+||.+||+.||++|||++++|+||||+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~ 312 (327)
T cd08227 237 PAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ 312 (327)
T ss_pred hhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhh
Confidence 0001134678999999999999999999999999999974
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-41 Score=327.74 Aligned_cols=261 Identities=28% Similarity=0.478 Sum_probs=214.2
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccC--CcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI--NRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
+|.+.+.||+|++|.||+|.+..+++.||+|.+...... .......+..|+.+++++. |+||+++++++.+....++
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~l 79 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELK-HPNIIGLLDVFGHKSNINL 79 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcC-CCCChhhhheeecCCEEEE
Confidence 488889999999999999999988999999998754432 1223355778999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 146 IMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
||||+ +++|.+++.... .+++..+..++.||+.||.|||++|++|+||+|+||+++ .++.++|+|||++......
T Consensus 80 v~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~---~~~~~~l~dfg~~~~~~~~ 155 (298)
T cd07841 80 VFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIA---SDGVLKLADFGLARSFGSP 155 (298)
T ss_pred EEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEc---CCCCEEEccceeeeeccCC
Confidence 99999 899999998766 799999999999999999999999999999999999995 5677999999999876443
Q ss_pred C-cccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC------------
Q 010013 225 D-VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS------------ 289 (520)
Q Consensus 225 ~-~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~------------ 289 (520)
. ......+++.|+|||.+.+ .++.++|||||||++|++++|.+||.+....+....+........
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (298)
T cd07841 156 NRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPD 235 (298)
T ss_pred CccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccc
Confidence 2 2333456888999998753 478899999999999999999888877766554444432110000
Q ss_pred ------------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCCC
Q 010013 290 ------------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDA 333 (520)
Q Consensus 290 ------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~~ 333 (520)
...+...+..+.++|.+||..+|++|||+.++|+|+||+.....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~~ 291 (298)
T cd07841 236 YVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAP 291 (298)
T ss_pred cccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCCC
Confidence 00123457889999999999999999999999999999875543
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-41 Score=347.83 Aligned_cols=263 Identities=22% Similarity=0.311 Sum_probs=194.2
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCC-cEEEEE--------------EecccccCCcccHHHHHHHHHHHHhccCC
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTK-QQFACK--------------SISSRKLINRDDVEDVRREVQIMHHLTGH 127 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~-~~~avK--------------~~~~~~~~~~~~~~~~~~e~~~l~~l~~h 127 (520)
..+.++|.+++.||+|+||+||+|..+... ...++| .+.+...........+.+|+.+|+++. |
T Consensus 144 ~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~-H 222 (501)
T PHA03210 144 DEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLN-H 222 (501)
T ss_pred hhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCC-C
Confidence 345678999999999999999998765432 222222 111111112223456889999999998 9
Q ss_pred CCeeEEEEEEEeCCeEEEEEeccCCCchHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEee
Q 010013 128 RNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-----GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFS 202 (520)
Q Consensus 128 p~iv~l~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~ 202 (520)
|||+++++++...+..|+|++++. ++|.+++... .......+..++.||+.||.|||++||+||||||+|||++
T Consensus 223 pnIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~ 301 (501)
T PHA03210 223 ENILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLN 301 (501)
T ss_pred CCcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC
Confidence 999999999999999999999994 5777776543 2234667888999999999999999999999999999994
Q ss_pred cCCCCCCeeEeecccccccCCCCc--ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCC-CC--HHH
Q 010013 203 SSAEDSPLKATDFGLSVFFKPGDV--FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWG-ET--EQS 276 (520)
Q Consensus 203 ~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~-~~--~~~ 276 (520)
.++.+||+|||++..+..... .....||+.|+|||++.+ .++.++|||||||++|+|++|..++.. .. ...
T Consensus 302 ---~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~ 378 (501)
T PHA03210 302 ---CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGK 378 (501)
T ss_pred ---CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHH
Confidence 567799999999987643322 224579999999999864 589999999999999999998765432 21 111
Q ss_pred HHHHHHcCC----CCCCC------------------C------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccc
Q 010013 277 IFDAILRGH----IDFSS------------------D------PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (520)
Q Consensus 277 ~~~~~~~~~----~~~~~------------------~------~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~ 328 (520)
.+..+.... ..++. . ....++..+.++|.+||+.||++|||+.|+|+||||.
T Consensus 379 ~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~ 458 (501)
T PHA03210 379 QLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFS 458 (501)
T ss_pred HHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhh
Confidence 111111110 00000 0 0013567788899999999999999999999999997
Q ss_pred cC
Q 010013 329 VD 330 (520)
Q Consensus 329 ~~ 330 (520)
..
T Consensus 459 ~~ 460 (501)
T PHA03210 459 AE 460 (501)
T ss_pred cC
Confidence 54
|
|
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-41 Score=325.64 Aligned_cols=255 Identities=31% Similarity=0.553 Sum_probs=212.3
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 147 (520)
+|.+.+.||+|+||.||+|.+..+|..+|+|++..... .....+.+.+|+.+++++. ||||+++++++..+...++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~-~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~~v~ 78 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRL-EGGIPNQALREIKALQACQ-HPYVVKLLDVFPHGSGFVLVM 78 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccc-cchhhHHHHHHHHHHHhCC-CCCCcceeeEEecCCeeEEEe
Confidence 48899999999999999999998999999999865432 2234567889999999998 999999999999999999999
Q ss_pred eccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC-
Q 010013 148 DLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (520)
Q Consensus 148 e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~- 225 (520)
||+ +++|.+++.. ...+++..+..++.||+.||.|||+.|++|+||||+||+++ .++.++|+|||.+.......
T Consensus 79 e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~---~~~~~~l~dfg~~~~~~~~~~ 154 (286)
T cd07832 79 EYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLIS---ADGVLKIADFGLARLFSEEEP 154 (286)
T ss_pred ccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEc---CCCcEEEeeeeecccccCCCC
Confidence 999 9999998865 45689999999999999999999999999999999999994 46779999999988764332
Q ss_pred -cccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC----------------
Q 010013 226 -VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI---------------- 286 (520)
Q Consensus 226 -~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~---------------- 286 (520)
......|+..|+|||.+.+ .++.++||||+|+++|+|++|.+||.+.........+.....
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07832 155 RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDY 234 (286)
T ss_pred CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchh
Confidence 2344578999999998753 368899999999999999999988887766554444332110
Q ss_pred ---CCCC-------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccc
Q 010013 287 ---DFSS-------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (520)
Q Consensus 287 ---~~~~-------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~ 328 (520)
.++. ..++..+..+.++|.+||..+|++|||++++|+||||.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 235 NKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred hcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 0000 01235678999999999999999999999999999983
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-41 Score=318.06 Aligned_cols=252 Identities=25% Similarity=0.556 Sum_probs=216.5
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 147 (520)
+|++.+.||+|+||.||++.+..+|+.+|+|.+..... .....+.+.+|+.+++++. ||||+++++++...+..++||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKM-SPKEREESRKEVAVLSNMK-HPNIVQYQESFEENGNLYIVM 78 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhC-ChHHHHHHHHHHHHHHhCC-CCCeeeeEeeecCCCeEEEEE
Confidence 58899999999999999999999999999999864332 2234567889999999998 999999999999999999999
Q ss_pred eccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 148 DLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 148 e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
||+.+++|.+.+.... .+++..+..++.|++.||.|||++|++|+||+|+||+++ .++.++|+|||.+.......
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~---~~~~~~l~d~~~~~~~~~~~ 155 (256)
T cd08218 79 DYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLT---KDGTIKLGDFGIARVLNSTV 155 (256)
T ss_pred ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc---CCCCEEEeeccceeecCcch
Confidence 9999999999887643 578999999999999999999999999999999999994 46679999999998764332
Q ss_pred c-ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHH
Q 010013 226 V-FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (520)
Q Consensus 226 ~-~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (520)
. .....|++.|+|||++.+ .++.++|+|||||+++++++|..||......+....+..+..... ...++..+.++
T Consensus 156 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l 232 (256)
T cd08218 156 ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPV---SSHYSYDLRNL 232 (256)
T ss_pred hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCCC---cccCCHHHHHH
Confidence 2 223468889999999864 478899999999999999999999988877777777766554322 24678999999
Q ss_pred HHHhcccCCCCCCCHHHHHcCCcc
Q 010013 304 VKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 304 i~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
|.+||+.+|++||++.++++||||
T Consensus 233 i~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 233 VSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred HHHHhhCChhhCcCHHHHhhCcCC
Confidence 999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-41 Score=325.42 Aligned_cols=258 Identities=28% Similarity=0.429 Sum_probs=207.6
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe----
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS---- 142 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~---- 142 (520)
++|.+.+.||+|+||.||+|.+..+++.||+|.+..... .......+.+|+.+++++.+||||+++++++.....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 79 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMD-EEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKP 79 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhcc-ccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCc
Confidence 368999999999999999999999999999998765322 222345678899999999868999999999877665
Q ss_pred -EEEEEeccCCCchHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecc
Q 010013 143 -VNLIMDLCAGGELFDRIIAK-----GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (520)
Q Consensus 143 -~~lv~e~~~g~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg 216 (520)
.|+||||+++ +|.+++... ..+++..+..++.||+.||.|||++|++||||+|+||+++. .++.+||+|||
T Consensus 80 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~--~~~~~kl~dfg 156 (295)
T cd07837 80 SLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDK--QKGLLKIADLG 156 (295)
T ss_pred eEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEec--CCCeEEEeecc
Confidence 8999999986 788877543 35799999999999999999999999999999999999953 26789999999
Q ss_pred cccccCCC-CcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC----
Q 010013 217 LSVFFKPG-DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS---- 289 (520)
Q Consensus 217 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~---- 289 (520)
++...... .......+++.|+|||.+.+ .++.++||||||+++|+|++|..||.+.........+........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (295)
T cd07837 157 LGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVW 236 (295)
T ss_pred cceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhC
Confidence 98865322 12233457888999998753 478899999999999999999999988766554443322110000
Q ss_pred --------------------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccc
Q 010013 290 --------------------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (520)
Q Consensus 290 --------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~ 328 (520)
....+.++..+.++|.+||.++|.+|||+.++|.||||+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 237 PGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred cchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 001245788999999999999999999999999999985
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-41 Score=323.87 Aligned_cols=254 Identities=26% Similarity=0.459 Sum_probs=209.2
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe-----
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED----- 139 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~----- 139 (520)
..+.|.+.+.||.|+||.||+|.+..+++.+|+|++.... .....+..|+.+++++..||||+++++++..
T Consensus 14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 89 (282)
T cd06636 14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE----DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPG 89 (282)
T ss_pred hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh----HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccC
Confidence 4467999999999999999999999999999999875432 2345688899999999669999999998853
Q ss_pred -CCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecc
Q 010013 140 -RHSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (520)
Q Consensus 140 -~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg 216 (520)
...++++|||+++++|.+++... ..+++..+..++.||+.||.|||+.||+|+||+|+||+++ .++.++|+|||
T Consensus 90 ~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~---~~~~~~l~dfg 166 (282)
T cd06636 90 HDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLT---ENAEVKLVDFG 166 (282)
T ss_pred CCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEeeCc
Confidence 46789999999999999988653 4588999999999999999999999999999999999994 56779999999
Q ss_pred cccccCCC-CcccccccCCCccCchhhc------ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC
Q 010013 217 LSVFFKPG-DVFKDLVGSAYYVAPEVLR------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289 (520)
Q Consensus 217 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~------~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~ 289 (520)
++...... .......|++.|+|||.+. ..++.++|||||||++|+|++|..||...........+..... .
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~--~ 244 (282)
T cd06636 167 VSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPP--P 244 (282)
T ss_pred chhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCCC--C
Confidence 98765322 1223456899999999874 2477899999999999999999999977665444433333221 1
Q ss_pred CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 290 SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 290 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
......++..+.++|.+||+.||.+|||+.++|+||||
T Consensus 245 ~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 245 KLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred CCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 11224578999999999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=327.54 Aligned_cols=256 Identities=27% Similarity=0.491 Sum_probs=211.5
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
+.|.+.+.||+|+||.||+|.++.+++.+|+|.+..... .....+.+.+|+.+++++. ||||+++++++..+...++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 78 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESED-DKMVKKIAMREIRMLKQLR-HENLVNLIEVFRRKKRLYLV 78 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccC-cchhhHHHHHHHHHHHhcC-CcchhhHHHhcccCCeEEEE
Confidence 368899999999999999999998899999998865432 2234566889999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC-
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~- 225 (520)
|||+++++|..+......+++..+..++.||+.||.|||+.|++|+||+|+||++ ++++.++|+|||++.......
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~---~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07846 79 FEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILV---SQSGVVKLCDFGFARTLAAPGE 155 (286)
T ss_pred EecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---CCCCcEEEEeeeeeeeccCCcc
Confidence 9999999888877666679999999999999999999999999999999999999 456789999999988754332
Q ss_pred cccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCC----------------
Q 010013 226 VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID---------------- 287 (520)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~---------------- 287 (520)
......++..|+|||.+.+ .++.++||||||+++|+|++|.+||......+....+......
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T cd07846 156 VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFA 235 (286)
T ss_pred ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhh
Confidence 2234568889999998754 3678999999999999999999999776654433332211000
Q ss_pred ---CCC--------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 288 ---FSS--------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 288 ---~~~--------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
.+. ..++.++..+.+++.+||..+|++||++.++++||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 236 GMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred ccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 000 0134678899999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-41 Score=323.32 Aligned_cols=252 Identities=27% Similarity=0.418 Sum_probs=200.3
Q ss_pred eeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhc--cCCCCeeEEEEEEEeCCeEEEEEeccC
Q 010013 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHL--TGHRNIVELKGAYEDRHSVNLIMDLCA 151 (520)
Q Consensus 74 ~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l--~~hp~iv~l~~~~~~~~~~~lv~e~~~ 151 (520)
.||+|+||.||++.+..+++.+|+|.+.+.............+|..+++.+ ..||+|+.+++++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999999999999999998754432222223334444444333 249999999999999999999999999
Q ss_pred CCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCcccccc
Q 010013 152 GGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231 (520)
Q Consensus 152 g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 231 (520)
|++|.+++...+.+++..+..++.|++.||.|||++|++||||||+||++ +.++.++|+|||++....... .....
T Consensus 81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~---~~~~~~~l~dfg~~~~~~~~~-~~~~~ 156 (279)
T cd05633 81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKK-PHASV 156 (279)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEE---CCCCCEEEccCCcceeccccC-ccCcC
Confidence 99999999888889999999999999999999999999999999999999 456789999999987654322 23346
Q ss_pred cCCCccCchhhc--ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcc
Q 010013 232 GSAYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309 (520)
Q Consensus 232 gt~~y~aPE~~~--~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 309 (520)
|++.|+|||.+. ..++.++||||+||++|+|++|..||........ ..+............+.++..+.++|.+||.
T Consensus 157 ~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 235 (279)
T cd05633 157 GTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMTLTVNVELPDSFSPELKSLLEGLLQ 235 (279)
T ss_pred CCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH-HHHHHHhhcCCcCCccccCHHHHHHHHHHhc
Confidence 899999999875 2478899999999999999999999975432111 1111111112222234678999999999999
Q ss_pred cCCCCCC-----CHHHHHcCCccccC
Q 010013 310 ADPKERL-----SAAEVLNHPWMRVD 330 (520)
Q Consensus 310 ~dp~~Rp-----s~~~~l~~~~~~~~ 330 (520)
.||.+|| |+.++++||||+..
T Consensus 236 ~~p~~R~~~~~~~~~~~~~h~~~~~~ 261 (279)
T cd05633 236 RDVSKRLGCLGRGAQEVKEHVFFKGI 261 (279)
T ss_pred CCHHHhcCCCCCCHHHHHhCccccCC
Confidence 9999999 69999999999864
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-41 Score=318.86 Aligned_cols=254 Identities=30% Similarity=0.518 Sum_probs=214.8
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.++|.+.+.||+|+||.||+|.+..+++.+++|++.... ....+.+.+|+.++++++ ||||+++++++.+.+.+++
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~l 77 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP---GDDFEIIQQEISMLKECR-HPNIVAYFGSYLRRDKLWI 77 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc---hhhHHHHHHHHHHHHhCC-CCChhceEEEEEeCCEEEE
Confidence 367999999999999999999999889999999986432 235678899999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 146 IMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
+|||+++++|.+++... ..+++..+..++.|++.||.|||++|++|+||+|+||+++ .++.++|+|||.+......
T Consensus 78 ~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~---~~~~~~l~d~g~~~~~~~~ 154 (262)
T cd06613 78 VMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLT---EDGDVKLADFGVSAQLTAT 154 (262)
T ss_pred EEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEEC---CCCCEEECccccchhhhhh
Confidence 99999999999988776 6899999999999999999999999999999999999994 5677999999998875432
Q ss_pred C-cccccccCCCccCchhhcc----cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCC-CCCCCCCH
Q 010013 225 D-VFKDLVGSAYYVAPEVLRR----NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSS-DPWPNISS 298 (520)
Q Consensus 225 ~-~~~~~~gt~~y~aPE~~~~----~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 298 (520)
. ......++..|+|||.+.+ .++.++||||||+++|+|++|..||...........+......... .....++.
T Consensus 155 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (262)
T cd06613 155 IAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSP 234 (262)
T ss_pred hhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhH
Confidence 2 2234568889999998753 5788999999999999999999999887765555444443222111 11234578
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHcCCc
Q 010013 299 SAKDIVKKMLHADPKERLSAAEVLNHPW 326 (520)
Q Consensus 299 ~~~~li~~~l~~dp~~Rps~~~~l~~~~ 326 (520)
.+.+++.+||..+|.+|||+.+++.|+|
T Consensus 235 ~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 235 VFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred HHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 8999999999999999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-43 Score=334.73 Aligned_cols=235 Identities=26% Similarity=0.442 Sum_probs=202.9
Q ss_pred ceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 010013 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~g 152 (520)
+-||+|+.|.||+|+.+ ++.||||++. +.-..+|+-|++|. ||||+.+.|+|.....+|||||||..
T Consensus 130 eWlGSGaQGAVF~Grl~--netVAVKKV~----------elkETdIKHLRkLk-H~NII~FkGVCtqsPcyCIiMEfCa~ 196 (904)
T KOG4721|consen 130 EWLGSGAQGAVFLGRLH--NETVAVKKVR----------ELKETDIKHLRKLK-HPNIITFKGVCTQSPCYCIIMEFCAQ 196 (904)
T ss_pred hhhccCcccceeeeecc--CceehhHHHh----------hhhhhhHHHHHhcc-CcceeeEeeeecCCceeEEeeecccc
Confidence 56999999999999986 4789999873 22246788899999 99999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCccccccc
Q 010013 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVG 232 (520)
Q Consensus 153 ~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~g 232 (520)
|.|...|+..++++......|..+|+.|+.|||.+.|||||||.-|||+.. +..|||+|||.++....-.....++|
T Consensus 197 GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~---~d~VKIsDFGTS~e~~~~STkMSFaG 273 (904)
T KOG4721|consen 197 GQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISY---DDVVKISDFGTSKELSDKSTKMSFAG 273 (904)
T ss_pred ccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeec---cceEEeccccchHhhhhhhhhhhhhh
Confidence 999999999999999999999999999999999999999999999999964 55699999999998765555567899
Q ss_pred CCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccC
Q 010013 233 SAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311 (520)
Q Consensus 233 t~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d 311 (520)
|..|||||+++. ..+.|+|||||||+|||||||..||.+.....++--+-.+...++. ...+|..++-||++||+-.
T Consensus 274 TVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~Lpv--PstcP~GfklL~Kqcw~sK 351 (904)
T KOG4721|consen 274 TVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPV--PSTCPDGFKLLLKQCWNSK 351 (904)
T ss_pred hHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccC--cccCchHHHHHHHHHHhcC
Confidence 999999999974 5899999999999999999999999776654433222222333332 2478999999999999999
Q ss_pred CCCCCCHHHHHcCC
Q 010013 312 PKERLSAAEVLNHP 325 (520)
Q Consensus 312 p~~Rps~~~~l~~~ 325 (520)
|..|||+.++|.|-
T Consensus 352 pRNRPSFrqil~Hl 365 (904)
T KOG4721|consen 352 PRNRPSFRQILLHL 365 (904)
T ss_pred CCCCccHHHHHHHH
Confidence 99999999999984
|
|
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-41 Score=322.26 Aligned_cols=255 Identities=26% Similarity=0.473 Sum_probs=214.6
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
..|...+.||.|+||.||+|.+..++..+|+|.+.... .....+.+.+|+.+++++. ||||+++++++.++..+++|
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 80 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE--AEDEIEDIQQEITVLSQCD-SPYVTKYYGSYLKGTKLWII 80 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccc--cHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEECCEEEEE
Confidence 45888899999999999999999889999999886432 1234577889999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCc
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 226 (520)
|||++|++|.+++.. +++++..+..++.|++.||.|||+.+++|+||+|+||+++ .++.++|+|||++........
T Consensus 81 ~e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~---~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06640 81 MEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLS---EQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred EecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEc---CCCCEEEcccccceeccCCcc
Confidence 999999999998764 5789999999999999999999999999999999999994 566799999999977643321
Q ss_pred -ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Q 010013 227 -FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (520)
Q Consensus 227 -~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (520)
.....++..|+|||.+.+ .++.++|+|||||++|+|++|..||...........+..... ......++..+.+++
T Consensus 157 ~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li 233 (277)
T cd06640 157 KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNP---PTLTGEFSKPFKEFI 233 (277)
T ss_pred ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCCC---CCCchhhhHHHHHHH
Confidence 223467889999998864 478899999999999999999999987766555544433222 112235678899999
Q ss_pred HHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 305 KKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 305 ~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
.+||..+|++||++.++++|+||....
T Consensus 234 ~~~l~~~p~~Rp~~~~il~~~~~~~~~ 260 (277)
T cd06640 234 DACLNKDPSFRPTAKELLKHKFIVKNA 260 (277)
T ss_pred HHHcccCcccCcCHHHHHhChHhhhcc
Confidence 999999999999999999999997543
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-41 Score=322.73 Aligned_cols=258 Identities=25% Similarity=0.428 Sum_probs=209.0
Q ss_pred ccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEE---
Q 010013 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE--- 138 (520)
Q Consensus 62 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~--- 138 (520)
.....++|.+.+.||+|+||.||+|.++.+++.+|+|++.... .....+.+|+.+++++.+||||+++++++.
T Consensus 13 ~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 88 (286)
T cd06638 13 FPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH----DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKD 88 (286)
T ss_pred CCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc----chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecc
Confidence 3446688999999999999999999999999999999875422 123567889999999966999999999873
Q ss_pred --eCCeEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeE
Q 010013 139 --DRHSVNLIMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKA 212 (520)
Q Consensus 139 --~~~~~~lv~e~~~g~~L~~~l~~----~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl 212 (520)
.+...++||||++|++|.+.+.. ...+++..+..++.|++.||.|||+.+++||||||+||+++ .++.++|
T Consensus 89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~---~~~~~kl 165 (286)
T cd06638 89 VKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLT---TEGGVKL 165 (286)
T ss_pred cCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEEC---CCCCEEE
Confidence 45679999999999999887643 34688999999999999999999999999999999999994 4667999
Q ss_pred eecccccccCCCC-cccccccCCCccCchhhc------ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCC
Q 010013 213 TDFGLSVFFKPGD-VFKDLVGSAYYVAPEVLR------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH 285 (520)
Q Consensus 213 ~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~------~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~ 285 (520)
+|||++....... ......|++.|+|||++. ..++.++|||||||++|+|++|..||...........+....
T Consensus 166 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~ 245 (286)
T cd06638 166 VDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNP 245 (286)
T ss_pred ccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccC
Confidence 9999988754322 223456899999999874 237889999999999999999999998776544433332221
Q ss_pred CCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 286 IDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 286 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
.. .......++..+.+++.+||+.+|++|||+.++++|+||
T Consensus 246 ~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 246 PP-TLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred CC-cccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 11 111112457889999999999999999999999999997
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-41 Score=320.22 Aligned_cols=248 Identities=27% Similarity=0.467 Sum_probs=200.2
Q ss_pred ccceeeccee--eccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 66 RNTYIFGREL--GRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 66 ~~~y~~~~~l--g~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
.+.|.+.+.+ |+|+||.||++.++.++..+|+|.+....... .|+.....+.+||||+++++.+...+.+
T Consensus 13 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--------~e~~~~~~~~~h~~iv~~~~~~~~~~~~ 84 (267)
T PHA03390 13 LKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA--------IEPMVHQLMKDNPNFIKLYYSVTTLKGH 84 (267)
T ss_pred HHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch--------hhHHHHHHhhcCCCEEEEEEEEecCCee
Confidence 3567776666 99999999999999999999999986543211 1222222233599999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCC-CeeEeecccccccC
Q 010013 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDS-PLKATDFGLSVFFK 222 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~-~~kl~Dfg~a~~~~ 222 (520)
++||||+++++|.+++.....+++..+..++.||+.||.|||+.|++||||||+||+++. ++ .++|+|||++....
T Consensus 85 ~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~---~~~~~~l~dfg~~~~~~ 161 (267)
T PHA03390 85 VLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDR---AKDRIYLCDYGLCKIIG 161 (267)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeC---CCCeEEEecCccceecC
Confidence 999999999999999988888999999999999999999999999999999999999963 33 79999999987654
Q ss_pred CCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHH-HHHHHcCCCCCCCCCCCCCCHHH
Q 010013 223 PGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSI-FDAILRGHIDFSSDPWPNISSSA 300 (520)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 300 (520)
.. ....++..|+|||++.+ .++.++||||||+++|+|++|..||........ ...+.... ......++.+++.+
T Consensus 162 ~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 237 (267)
T PHA03390 162 TP---SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QKKLPFIKNVSKNA 237 (267)
T ss_pred CC---ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-cccCCcccccCHHH
Confidence 32 23468899999999864 588899999999999999999999976543322 11111111 12222334689999
Q ss_pred HHHHHHhcccCCCCCCC-HHHHHcCCccc
Q 010013 301 KDIVKKMLHADPKERLS-AAEVLNHPWMR 328 (520)
Q Consensus 301 ~~li~~~l~~dp~~Rps-~~~~l~~~~~~ 328 (520)
.++|.+||+.+|.+||+ ++++|+||||+
T Consensus 238 ~~li~~~l~~~p~~R~~~~~~~l~h~~~~ 266 (267)
T PHA03390 238 NDFVQSMLKYNINYRLTNYNEIIKHPFLK 266 (267)
T ss_pred HHHHHHHhccChhhCCchHHHHhcCCccc
Confidence 99999999999999996 69999999996
|
|
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-41 Score=322.21 Aligned_cols=258 Identities=27% Similarity=0.499 Sum_probs=210.5
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCC---cccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN---RDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~---~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
.|+.++.||+|++|.||+|.+..+++.+|+|++....... ....+.+.+|+.++++++ ||||+++++++.+.+..+
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~ 79 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLN-HPHIIRMLGATCEDSHFN 79 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcC-CCceehhhceeccCCeEE
Confidence 3788899999999999999999999999999986433111 123567899999999998 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
+||||++|++|.+++.+.+++++..+..++.||+.||.|||++|++|+||+|+||+++. .+..++|+|||.+......
T Consensus 80 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~--~~~~~~l~dfg~~~~~~~~ 157 (268)
T cd06630 80 LFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDS--TGQRLRIADFGAAARLAAK 157 (268)
T ss_pred EEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCEEEEcccccccccccc
Confidence 99999999999999988888999999999999999999999999999999999999953 2346999999998776432
Q ss_pred C-----cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCCCCC
Q 010013 225 D-----VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG-HIDFSSDPWPNIS 297 (520)
Q Consensus 225 ~-----~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 297 (520)
. ......|+..|+|||.+.+ .++.++||||+|+++++|++|..||...........+... .........+.++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (268)
T cd06630 158 GTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLS 237 (268)
T ss_pred cccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhC
Confidence 1 1123467889999998864 5788999999999999999999999654432222222111 0111111223578
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHcCCccc
Q 010013 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (520)
Q Consensus 298 ~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~ 328 (520)
+.+.+++.+||..+|++|||+.++++||||+
T Consensus 238 ~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 238 PGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred HHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 8999999999999999999999999999985
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=316.99 Aligned_cols=255 Identities=29% Similarity=0.499 Sum_probs=209.7
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEeccccc--CCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--Ce
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKL--INRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--HS 142 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~--~~ 142 (520)
..|.+++.||+|+||.||+|.+..++..||+|.+..... ......+.+.+|+.+++++. ||||+++++++.+. ..
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~ 80 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLL-HERIVQYYGCLRDPMERT 80 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcC-CCCeeeEEeEeccCCCce
Confidence 468999999999999999999999999999998754321 12234567889999999998 99999999988763 56
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
++++|||++|++|.+++.+...+++..+..++.|++.||.|||+.|++|+||||+||+++ .++.++|+|||.+....
T Consensus 81 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~---~~~~~~l~Dfg~~~~~~ 157 (265)
T cd06652 81 LSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRD---SVGNVKLGDFGASKRLQ 157 (265)
T ss_pred EEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEec---CCCCEEECcCccccccc
Confidence 889999999999999998878899999999999999999999999999999999999994 56789999999987653
Q ss_pred CC----CcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 010013 223 PG----DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (520)
Q Consensus 223 ~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (520)
.. .......|+..|+|||.+.+ .++.++|||||||++|+|++|+.||...........+...... ......++
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 235 (265)
T cd06652 158 TICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTN--PVLPPHVS 235 (265)
T ss_pred cccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCC--CCCchhhC
Confidence 21 11233568889999998754 4788999999999999999999999876554444443322211 11123567
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHcCCccc
Q 010013 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (520)
Q Consensus 298 ~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~ 328 (520)
..+.++|.+||. +|++||+++++++|||+.
T Consensus 236 ~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 236 DHCRDFLKRIFV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred HHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence 889999999995 999999999999999973
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-40 Score=320.15 Aligned_cols=255 Identities=27% Similarity=0.477 Sum_probs=211.0
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC---
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH--- 141 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~--- 141 (520)
..++|.+.+.||+|++|.||+|.++.+++.+++|++.... ...+.+.+|+.+++++..||||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 79 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE----DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPG 79 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc----hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCC
Confidence 4578999999999999999999999889999999986432 234678899999999966999999999987644
Q ss_pred ---eEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEee
Q 010013 142 ---SVNLIMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATD 214 (520)
Q Consensus 142 ---~~~lv~e~~~g~~L~~~l~~----~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~D 214 (520)
.+++||||+++++|.+++.. ...+++..+..++.|++.||.|||+.|++|+||+|+||+++ .++.++|+|
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~---~~~~~~l~d 156 (275)
T cd06608 80 NDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLT---KNAEVKLVD 156 (275)
T ss_pred cceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEc---cCCeEEECC
Confidence 58999999999999988765 35799999999999999999999999999999999999994 567799999
Q ss_pred cccccccCCCC-cccccccCCCccCchhhcc------cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCC
Q 010013 215 FGLSVFFKPGD-VFKDLVGSAYYVAPEVLRR------NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID 287 (520)
Q Consensus 215 fg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~------~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~ 287 (520)
||.+....... ......|++.|+|||++.. .++.++||||||+++|++++|..||...........+......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 236 (275)
T cd06608 157 FGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPP 236 (275)
T ss_pred CccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCC
Confidence 99987654322 2234568899999998742 3677899999999999999999999876655555555443322
Q ss_pred CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 288 FSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 288 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
. ......++..++++|.+||..||++|||+.++++|||+
T Consensus 237 ~-~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 237 T-LKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred C-CCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 1 11112467899999999999999999999999999996
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=316.14 Aligned_cols=254 Identities=30% Similarity=0.494 Sum_probs=214.9
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEeccccc--CCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKL--INRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
+|+..+.||+|++|.||+|....++..+++|.+..... ......+.+.+|+.+++.+. ||||+++++++.+...+++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~l 79 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQ-HPNIVQYLGTEREEDNLYI 79 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcC-CCCchheeeeEecCCeEEE
Confidence 47788999999999999999998899999999864332 12334577899999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
++||+++++|.+++.+.+.+++..+..++.||+.||.|||+.|++|+||+|+||+++ .++.+||+|||.+.......
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~---~~~~~kl~d~~~~~~~~~~~ 156 (258)
T cd06632 80 FLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVD---TNGVVKLADFGMAKQVVEFS 156 (258)
T ss_pred EEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEccCccceeccccc
Confidence 999999999999998888899999999999999999999999999999999999994 56789999999988765443
Q ss_pred cccccccCCCccCchhhcc-c-CCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHH
Q 010013 226 VFKDLVGSAYYVAPEVLRR-N-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (520)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~-~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (520)
......|++.|+|||.+.. . ++.++|+||||+++|+|++|..||...........+..... . ......+++.+.++
T Consensus 157 ~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~l 234 (258)
T cd06632 157 FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKE-L-PPIPDHLSDEAKDF 234 (258)
T ss_pred cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhccc-C-CCcCCCcCHHHHHH
Confidence 3345678899999998753 3 78899999999999999999999977665444444433111 1 11224678999999
Q ss_pred HHHhcccCCCCCCCHHHHHcCCcc
Q 010013 304 VKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 304 i~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
+.+||..+|++|||+.+++.|||+
T Consensus 235 i~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 235 ILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred HHHHhhcCcccCcCHHHHhcCCCC
Confidence 999999999999999999999996
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-41 Score=322.14 Aligned_cols=252 Identities=29% Similarity=0.500 Sum_probs=205.8
Q ss_pred eeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--CeEEEE
Q 010013 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--HSVNLI 146 (520)
Q Consensus 69 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~--~~~~lv 146 (520)
|++.+.||+|+||.||+|.+..+++.+|+|++..... .... ....+|+.++.++.+||||+++++++.+. +..++|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~~~-~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFK-SLEQ-VNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccC-Cchh-hhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 6788999999999999999999999999998865321 2222 23457889999997799999999999987 899999
Q ss_pred EeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 147 MDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
|||+.+ +|.+.+.. ...+++..+..++.|++.||.|||+.|++||||+|+||+++ . +.+||+|||++.......
T Consensus 79 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~---~-~~~kl~dfg~~~~~~~~~ 153 (282)
T cd07831 79 FELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIK---D-DILKLADFGSCRGIYSKP 153 (282)
T ss_pred EecCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEc---C-CCeEEEecccccccccCC
Confidence 999974 78787765 35689999999999999999999999999999999999995 3 789999999998765444
Q ss_pred cccccccCCCccCchhhc--ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCC------------------
Q 010013 226 VFKDLVGSAYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH------------------ 285 (520)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~--~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~------------------ 285 (520)
......+++.|+|||.+. +.++.++|||||||++|+|++|..||.+.+..+....+....
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (282)
T cd07831 154 PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMN 233 (282)
T ss_pred CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhccccccc
Confidence 444566889999999764 346889999999999999999999998876655444332211
Q ss_pred CCCCCC-------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 286 IDFSSD-------PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 286 ~~~~~~-------~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
..++.. ..+.++..+.++|.+||.++|++|||+.++++||||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 234 YNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred ccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 001100 013568999999999999999999999999999997
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=316.86 Aligned_cols=254 Identities=28% Similarity=0.501 Sum_probs=213.3
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 147 (520)
+|.+.+.||+|+||.||+|.+..+++.+++|.+..... .....+.+..|+.++++++ |+||+++++++...+.+++|+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDN-DPKTIKEIADEMKVLELLK-HPNLVKYYGVEVHREKVYIFM 78 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECccc-chHHHHHHHHHHHHHHhCC-CCChhheeeeEecCCEEEEEE
Confidence 58899999999999999999998899999999875433 2346678999999999998 999999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCc-
Q 010013 148 DLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV- 226 (520)
Q Consensus 148 e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~- 226 (520)
||+++++|.+++.....+++..+..++.|++.||.|||+.|++|+||+|+||+++ .++.+||+|||.+........
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~---~~~~~kl~d~g~~~~~~~~~~~ 155 (264)
T cd06626 79 EYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLD---HNGVIKLGDFGCAVKLKNNTTT 155 (264)
T ss_pred ecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEcccccccccCCCCCc
Confidence 9999999999998877799999999999999999999999999999999999994 577899999999887643322
Q ss_pred ----ccccccCCCccCchhhcc-c---CCCcchhHHHHHHHHHHhhCCCCCCCCCH-HHHHHHHHcCCCCCCCCCCCCCC
Q 010013 227 ----FKDLVGSAYYVAPEVLRR-N---YGAEADIWSAGVILYILLSGVPPFWGETE-QSIFDAILRGHIDFSSDPWPNIS 297 (520)
Q Consensus 227 ----~~~~~gt~~y~aPE~~~~-~---~~~~~Dv~slG~~l~~ll~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 297 (520)
.....+++.|+|||.+.+ . .+.++||||||+++|++++|..||..... ......+.. ......+.+..++
T Consensus 156 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 234 (264)
T cd06626 156 MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA-GHKPPIPDSLQLS 234 (264)
T ss_pred ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc-CCCCCCCcccccC
Confidence 123467889999998863 2 68899999999999999999999976532 223322332 2222222334568
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 298 ~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
..+.++|.+||+.+|++|||+.+++.|||+
T Consensus 235 ~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 235 PEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred HHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 999999999999999999999999999996
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-41 Score=326.03 Aligned_cols=260 Identities=27% Similarity=0.429 Sum_probs=211.1
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--CeE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--HSV 143 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~--~~~ 143 (520)
.+.|.+.+.||+|+||.||+|.++.+|+.||+|++..... .......+.+|+.+++++. |+||+++++++... +.+
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~ 83 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNE-RDGIPISSLREITLLLNLR-HPNIVELKEVVVGKHLDSI 83 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccC-CCCCcchhhHHHHHHHhCC-CCCCcceEEEEecCCCCeE
Confidence 3679999999999999999999999999999999864332 1122234568999999998 99999999998754 568
Q ss_pred EEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 144 NLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
++||||+.+ +|.+.+.. ...+++..+..++.||+.||.|||+.|++||||||+||+++ .++.+||+|||.+....
T Consensus 84 ~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~---~~~~~kL~dfg~~~~~~ 159 (309)
T cd07845 84 FLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLT---DKGCLKIADFGLARTYG 159 (309)
T ss_pred EEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CCCCEEECccceeeecC
Confidence 999999965 78887765 35689999999999999999999999999999999999994 56789999999998765
Q ss_pred CCC-cccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCC------------
Q 010013 223 PGD-VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID------------ 287 (520)
Q Consensus 223 ~~~-~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~------------ 287 (520)
... ......+++.|+|||.+.+ .++.++|||||||++|+|++|..||...+.......+......
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
T cd07845 160 LPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDL 239 (309)
T ss_pred CccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcc
Confidence 332 2233456788999998753 4788999999999999999999999988877766655442111
Q ss_pred -------CCCCC-------CCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 288 -------FSSDP-------WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 288 -------~~~~~-------~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
..... ...+++.+.++|.+||+.||++|||+.++|+||||+...
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~ 297 (309)
T cd07845 240 PLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKP 297 (309)
T ss_pred cccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCC
Confidence 00000 123578899999999999999999999999999998543
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-40 Score=322.65 Aligned_cols=257 Identities=28% Similarity=0.493 Sum_probs=214.1
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
....|.+.+.||+|+||.||+|.+..+++.||+|.+...........+.+.+|+.+++.+. ||||+++.+++.+.+..+
T Consensus 13 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~~~~~~~~~~~~~ 91 (307)
T cd06607 13 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLR-HPNTIEYKGCYLREHTAW 91 (307)
T ss_pred cchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCC-CCCEEEEEEEEEeCCeEE
Confidence 3466999999999999999999999899999999986544334444567889999999998 999999999999999999
Q ss_pred EEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 145 LIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
+||||+. |++.+.+.. .+.+++..+..++.|++.||.|||+.|++|+||+|+||++ +.++.++|+|||++.....
T Consensus 92 lv~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~---~~~~~~kL~dfg~~~~~~~ 167 (307)
T cd06607 92 LVMEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILL---TEPGTVKLADFGSASLVSP 167 (307)
T ss_pred EEHHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEE---CCCCCEEEeecCcceecCC
Confidence 9999997 466666654 4579999999999999999999999999999999999999 4567899999999876543
Q ss_pred CCcccccccCCCccCchhhc----ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHH
Q 010013 224 GDVFKDLVGSAYYVAPEVLR----RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (520)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~----~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (520)
. ....+++.|+|||++. +.++.++||||||+++|+|++|..||.+.........+...... ......++..
T Consensus 168 ~---~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 242 (307)
T cd06607 168 A---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSP--TLSSNDWSDY 242 (307)
T ss_pred C---CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCCC--CCCchhhCHH
Confidence 2 3356888999999873 34788999999999999999999999887765554444433221 1111346789
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 300 AKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 300 ~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
+.++|.+||..+|++||++.+++.||||....
T Consensus 243 ~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 274 (307)
T cd06607 243 FRNFVDSCLQKIPQDRPSSEELLKHRFVLRER 274 (307)
T ss_pred HHHHHHHHhcCChhhCcCHHHHhcChhhcccC
Confidence 99999999999999999999999999998643
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-41 Score=321.34 Aligned_cols=254 Identities=29% Similarity=0.448 Sum_probs=212.5
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 147 (520)
+|.+.+.||+|+||.||+|.++.+++.+|+|.+..... ....+.+.+|+.+++++. ||||+++++.+.....+++++
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~ 78 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN--EAIQKQILRELDILHKCN-SPYIVGFYGAFYNNGDISICM 78 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC--hHHHHHHHHHHHHHHHCC-CCchhhhheeeecCCEEEEEE
Confidence 57888999999999999999999999999998865432 244567889999999998 999999999999999999999
Q ss_pred eccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH-cCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 148 DLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 148 e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~-~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
||+++++|.+++... ..+++..+..++.|++.||.|||+ .|++|+||||+||+++ .++.++|+|||.+.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~---~~~~~~l~d~g~~~~~~~~~ 155 (265)
T cd06605 79 EYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVN---SRGQIKLCDFGVSGQLVNSL 155 (265)
T ss_pred EecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEEC---CCCCEEEeecccchhhHHHH
Confidence 999999999998776 789999999999999999999999 9999999999999994 46779999999987654322
Q ss_pred cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCC-----HHHHHHHHHcCCCCCCCCCCCCCCHH
Q 010013 226 VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGET-----EQSIFDAILRGHIDFSSDPWPNISSS 299 (520)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (520)
. ....++..|+|||.+.+ .++.++||||||+++|++++|..||.... .......+....... .+...++..
T Consensus 156 ~-~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 232 (265)
T cd06605 156 A-KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPR--LPSGKFSPD 232 (265)
T ss_pred h-hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCC--CChhhcCHH
Confidence 2 22678889999998864 48889999999999999999999996542 223333333322211 111127889
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 300 AKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 300 ~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
+.++|.+||..+|++|||+.+++.||||+..
T Consensus 233 ~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~ 263 (265)
T cd06605 233 FQDFVNLCLIKDPRERPSYKELLEHPFIKKY 263 (265)
T ss_pred HHHHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence 9999999999999999999999999999764
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-41 Score=335.52 Aligned_cols=251 Identities=26% Similarity=0.404 Sum_probs=202.4
Q ss_pred ccceeecceeeccCCeEEEEEEE-----cCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTH-----KDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~ 140 (520)
.++|.+++.||+|+||.||+|.+ ..++..||+|++.... .....+.+.+|+.++..+..||||+++++++...
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~ 111 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHINIVNLLGACTVG 111 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc--CcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccC
Confidence 45799999999999999999974 3456789999986432 2234567889999999995599999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHhcC---------------------------------------------------------
Q 010013 141 HSVNLIMDLCAGGELFDRIIAKG--------------------------------------------------------- 163 (520)
Q Consensus 141 ~~~~lv~e~~~g~~L~~~l~~~~--------------------------------------------------------- 163 (520)
+..++||||++||+|.+++....
T Consensus 112 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (375)
T cd05104 112 GPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRS 191 (375)
T ss_pred CcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccc
Confidence 99999999999999999886432
Q ss_pred ------------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 164 ------------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 164 ------------------~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
.+++..+..++.||+.||.|||++||+||||||+|||++ .+..+||+|||++.......
T Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~---~~~~~kl~DfG~a~~~~~~~ 268 (375)
T cd05104 192 GSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLT---HGRITKICDFGLARDIRNDS 268 (375)
T ss_pred ceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEE---CCCcEEEecCccceeccCcc
Confidence 467888999999999999999999999999999999995 46679999999998764322
Q ss_pred cc---cccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCCCCHH
Q 010013 226 VF---KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQ-SIFDAILRGHIDFSSDPWPNISSS 299 (520)
Q Consensus 226 ~~---~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 299 (520)
.. ....++..|+|||.+.+ .++.++|||||||++|+|++ |..||...... .....+..+.... .....+.+
T Consensus 269 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 345 (375)
T cd05104 269 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRML---SPECAPSE 345 (375)
T ss_pred cccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCC---CCCCCCHH
Confidence 11 12234567999998864 58999999999999999998 89999776543 3344343332211 12346789
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 300 AKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 300 ~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
+.+++.+||+.||++|||+.++++.
T Consensus 346 l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 346 MYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred HHHHHHHHccCChhHCcCHHHHHHH
Confidence 9999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=318.34 Aligned_cols=248 Identities=18% Similarity=0.330 Sum_probs=207.2
Q ss_pred cceeecceeeccCCeEEEEEEEc---CCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHK---DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
..|.+.+.||+|+||.||+|.++ ..+..+|+|.+.... .......+.+|+.+++++. ||||+++++++..++..
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~ 81 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC--SDKQRRGFLAEALTLGQFD-HSNIVRLEGVITRGNTM 81 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC--CHHHHHHHHHHHHHHhcCC-CCCcCeEEEEEecCCCc
Confidence 56999999999999999999875 346789999886432 2233467889999999997 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 144 NLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
++||||+++++|.+++... ..+++..+..++.||+.||.|||++|++||||||+||+++ .++.++++|||.+....
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~---~~~~~~l~dfg~~~~~~ 158 (266)
T cd05064 82 MIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVN---SDLVCKISGFRRLQEDK 158 (266)
T ss_pred EEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEc---CCCcEEECCCccccccc
Confidence 9999999999999988764 5789999999999999999999999999999999999994 56789999999876543
Q ss_pred CCCccc--ccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCH
Q 010013 223 PGDVFK--DLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298 (520)
Q Consensus 223 ~~~~~~--~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (520)
...... ...++..|+|||.+. +.++.++|||||||++|++++ |..||++.........+..+... + ....++.
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~-~--~~~~~~~ 235 (266)
T cd05064 159 SEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRL-P--APRNCPN 235 (266)
T ss_pred ccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCC-C--CCCCCCH
Confidence 222111 223467899999875 458899999999999999775 99999998888777777655322 1 2356889
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 299 SAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 299 ~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.+.+++.+||+.+|++|||+.++++
T Consensus 236 ~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 236 LLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred HHHHHHHHHcCCCchhCCCHHHHHH
Confidence 9999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-41 Score=325.48 Aligned_cols=261 Identities=30% Similarity=0.539 Sum_probs=216.4
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
..+.|.....||+|+||.||++.+..++..+|||.+... .....+.+.+|+.+++.+. ||||+++++.+...+..+
T Consensus 20 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~-h~~ii~~~~~~~~~~~~~ 95 (292)
T cd06658 20 PREYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLR---KQQRRELLFNEVVIMRDYH-HENVVDMYNSYLVGDELW 95 (292)
T ss_pred hHHHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecc---hHHHHHHHHHHHHHHHhCC-CCcHHHHHHheecCCeEE
Confidence 345566678899999999999999989999999988542 2234567889999999998 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
+||||+++++|.+++.. +.+++..+..++.||+.||.|||++||+||||||+||+++ .++.++|+|||++......
T Consensus 96 lv~e~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~---~~~~~kL~dfg~~~~~~~~ 171 (292)
T cd06658 96 VVMEFLEGGALTDIVTH-TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLT---SDGRIKLSDFGFCAQVSKE 171 (292)
T ss_pred EEEeCCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc---CCCCEEEccCcchhhcccc
Confidence 99999999999887744 5689999999999999999999999999999999999994 5678999999998765322
Q ss_pred C-cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHH
Q 010013 225 D-VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (520)
Q Consensus 225 ~-~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (520)
. ......|++.|+|||.+.+ .++.++||||||+++|+|++|..||...........+...... .......++..+.+
T Consensus 172 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 250 (292)
T cd06658 172 VPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPP-RVKDSHKVSSVLRG 250 (292)
T ss_pred cccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC-ccccccccCHHHHH
Confidence 2 2233568899999998864 5888999999999999999999999887766655554433221 11122356889999
Q ss_pred HHHHhcccCCCCCCCHHHHHcCCccccCCCCC
Q 010013 303 IVKKMLHADPKERLSAAEVLNHPWMRVDGDAS 334 (520)
Q Consensus 303 li~~~l~~dp~~Rps~~~~l~~~~~~~~~~~~ 334 (520)
++.+||..+|++|||+.++++||||......+
T Consensus 251 li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~~ 282 (292)
T cd06658 251 FLDLMLVREPSQRATAQELLQHPFLKLAGPPS 282 (292)
T ss_pred HHHHHccCChhHCcCHHHHhhChhhhccCCcc
Confidence 99999999999999999999999998665544
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-40 Score=316.28 Aligned_cols=252 Identities=29% Similarity=0.524 Sum_probs=215.2
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe--CCeEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED--RHSVNL 145 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~--~~~~~l 145 (520)
+|.+.+.||.|+||.||+|.+..+++.+|+|.+..... .....+.+..|+.+++++. ||||+++++++.. ....++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~~ 78 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM-TEKEKQQLVSEVNILRELK-HPNIVRYYDRIIDRSNQTLYI 78 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHHhcC-CCccceeeeeeecCCCCEEEE
Confidence 48889999999999999999999999999999865433 3444577889999999998 9999999997753 456899
Q ss_pred EEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-----HcCCeeecCCCCcEEeecCCCCCCeeEeecc
Q 010013 146 IMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCH-----SMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~----~~~l~~~~~~~i~~qi~~~l~~LH-----~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg 216 (520)
+|||+++++|.+++.. ..++++..+..++.||+.||.||| +.+++|+||+|+||+++ .++.+||+|||
T Consensus 79 ~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~---~~~~~kl~d~g 155 (265)
T cd08217 79 VMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLD---ANNNVKLGDFG 155 (265)
T ss_pred EehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEe---cCCCEEEeccc
Confidence 9999999999998865 357899999999999999999999 88999999999999994 46789999999
Q ss_pred cccccCCCCc-ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCC
Q 010013 217 LSVFFKPGDV-FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP 294 (520)
Q Consensus 217 ~a~~~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (520)
++........ .....+++.|+|||.+.+ .++.++|+||||+++++|++|..||...........+..+..... ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~ 232 (265)
T cd08217 156 LAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRRI---PY 232 (265)
T ss_pred ccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCCCCC---cc
Confidence 9987654432 344578999999999864 478899999999999999999999998877776666665543221 23
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 295 NISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 295 ~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
.++..+.+++.+||..+|++|||+.++++|||+
T Consensus 233 ~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 233 RYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred ccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 678999999999999999999999999999995
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-41 Score=327.38 Aligned_cols=249 Identities=28% Similarity=0.481 Sum_probs=191.2
Q ss_pred cceeeccCCeEEEEEEEcC--CCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEE--eCCeEEEEE
Q 010013 72 GRELGRGQFGVTYLVTHKD--TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE--DRHSVNLIM 147 (520)
Q Consensus 72 ~~~lg~G~~g~Vy~~~~~~--~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~--~~~~~~lv~ 147 (520)
+.+||+|+||.||+|.++. ++..+|+|.+.... ....+.+|+.+++++. ||||+++++++. .+...++||
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-----~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-----ISMSACREIALLRELK-HPNVIALQKVFLSHSDRKVWLLF 79 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC-----CcHHHHHHHHHHHhCC-CCCeeeEEEEEeccCCCeEEEEE
Confidence 4689999999999999764 56889999885432 2245778999999998 999999999885 356789999
Q ss_pred eccCCCchHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecC-CCCCCeeEeeccc
Q 010013 148 DLCAGGELFDRIIAK---------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSS-AEDSPLKATDFGL 217 (520)
Q Consensus 148 e~~~g~~L~~~l~~~---------~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~-~~~~~~kl~Dfg~ 217 (520)
||+.+ +|.+.+... ..+++..+..++.||+.||.|||+.||+||||||+|||+... +.++.+||+|||+
T Consensus 80 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07867 80 DYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred eeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccc
Confidence 99864 777766421 248899999999999999999999999999999999999543 3456899999999
Q ss_pred ccccCCCC----cccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHH---------HHHHHHH
Q 010013 218 SVFFKPGD----VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQ---------SIFDAIL 282 (520)
Q Consensus 218 a~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~---------~~~~~~~ 282 (520)
++...... ......||+.|+|||++.+ .++.++|||||||++|+|++|.+||...... .....+.
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~ 238 (317)
T cd07867 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIF 238 (317)
T ss_pred eeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHH
Confidence 98764322 2234578999999998854 4789999999999999999999999654321 0111110
Q ss_pred cCCC--------------C-------C-----C--------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 283 RGHI--------------D-------F-----S--------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 283 ~~~~--------------~-------~-----~--------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
.... . + . .......+..+.+|+.+||..||.+|||+.|+|+||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 239 SVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred HhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 0000 0 0 0 00001235668899999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-41 Score=324.18 Aligned_cols=255 Identities=27% Similarity=0.436 Sum_probs=208.8
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--CeEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--HSVN 144 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~--~~~~ 144 (520)
+.|.+.+.||+|+||.||+|.+..+++.+|+|.+...... ......+.+|+.+++++. ||||+++++++... ...+
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~~~ 82 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-EGFPITSLREINILLKLQ-HPNIVTVKEVVVGSNLDKIY 82 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-ccchhhHHHHHHHHHhcC-CCCEEEEEEEEEecCCCcEE
Confidence 4699999999999999999999999999999998654322 223345678999999998 99999999998877 8999
Q ss_pred EEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 145 LIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
+||||+.+ +|.+.+.... .+++..+..++.||+.||.|||++|++|+||||+||+++ .++.++|+|||++.....
T Consensus 83 lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~---~~~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 83 MVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLN---NRGILKICDFGLAREYGS 158 (293)
T ss_pred EEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEEC---CCCcEEEeecCceeeccC
Confidence 99999975 8988887644 589999999999999999999999999999999999994 567899999999887654
Q ss_pred C-CcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCC-------------
Q 010013 224 G-DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID------------- 287 (520)
Q Consensus 224 ~-~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~------------- 287 (520)
. .......+++.|+|||.+.+ .++.++|+||||+++|+|++|..||...........+......
T Consensus 159 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (293)
T cd07843 159 PLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELP 238 (293)
T ss_pred CccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccc
Confidence 3 22334567889999998854 3688999999999999999999999877765554443221100
Q ss_pred -------------CCCCCCCC--CCHHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 288 -------------FSSDPWPN--ISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 288 -------------~~~~~~~~--~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
.....++. +++.+.++|.+||+.+|++|||+.|+|+||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 239 GAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred hhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 00011222 48889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-41 Score=322.75 Aligned_cols=254 Identities=29% Similarity=0.470 Sum_probs=207.2
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 147 (520)
.|++.+.||.|++|.||+|.++.+++.+|+|.+..... .....+.+.+|++++++++ ||||+++++++.+.+..++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~ 78 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELN-HPNIVKLLDVIHTENKLYLVF 78 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEcccccc-ccccchHHHHHHHHHHhcC-CCCCcchhhhcccCCcEEEEe
Confidence 37889999999999999999999999999998864332 2233467889999999998 999999999999999999999
Q ss_pred eccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 148 DLCAGGELFDRIIA--KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 148 e~~~g~~L~~~l~~--~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
||+. ++|.+++.. ...+++..+..++.|++.||.|||+.|++|+||+|+||+++ .++.+||+|||++.......
T Consensus 79 e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~---~~~~~~l~dfg~~~~~~~~~ 154 (284)
T cd07860 79 EFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFGLARAFGVPV 154 (284)
T ss_pred eccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEEeeccchhhcccCc
Confidence 9995 588888765 35689999999999999999999999999999999999994 56789999999987654322
Q ss_pred -cccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCC---------------
Q 010013 226 -VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID--------------- 287 (520)
Q Consensus 226 -~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~--------------- 287 (520)
......+++.|+|||.+.+ .++.++||||||+++|+|++|+.||.+.........+......
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07860 155 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDY 234 (284)
T ss_pred cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHH
Confidence 2233457889999998754 2578899999999999999999999877654433332221100
Q ss_pred ---CC-------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 288 ---FS-------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 288 ---~~-------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
++ ....+.++..++++|.+||+.||++|||++++|+||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 235 KPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred HhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 00 00123578899999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=323.22 Aligned_cols=252 Identities=23% Similarity=0.346 Sum_probs=202.0
Q ss_pred ccceeecceeeccCCeEEEEEEEcC----------------CCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCC
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKD----------------TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN 129 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~----------------~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~ 129 (520)
.++|.+.+.||+|+||.||+|.+.. ++..||+|++.... .......+.+|+.++.++. |||
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~n 80 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA--NKNARNDFLKEVKILSRLK-DPN 80 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC--CHHHHHHHHHHHHHHhhcC-CCC
Confidence 4679999999999999999998642 34579999886432 2334567889999999998 999
Q ss_pred eeEEEEEEEeCCeEEEEEeccCCCchHHHHHhcC-------------------CCCHHHHHHHHHHHHHHHHHHHHcCCe
Q 010013 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKG-------------------HYSERAAANLCRQMVTVVHYCHSMGVM 190 (520)
Q Consensus 130 iv~l~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-------------------~l~~~~~~~i~~qi~~~l~~LH~~~iv 190 (520)
|+++++++.+.+..++||||+++++|.+++.... .+++..+..++.||+.||.|||+.||+
T Consensus 81 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~iv 160 (304)
T cd05096 81 IIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFV 160 (304)
T ss_pred eeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 9999999999999999999999999999886531 367788999999999999999999999
Q ss_pred eecCCCCcEEeecCCCCCCeeEeecccccccCCCCc---ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh--
Q 010013 191 HRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-- 264 (520)
Q Consensus 191 H~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-- 264 (520)
||||||+|||++ .++.+||+|||++........ .....++..|+|||++. +.++.++||||||+++|+|++
T Consensus 161 H~dlkp~Nill~---~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~ 237 (304)
T cd05096 161 HRDLATRNCLVG---ENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLC 237 (304)
T ss_pred ccCcchhheEEc---CCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHcc
Confidence 999999999994 567899999999986543321 12234577899999875 458999999999999999986
Q ss_pred CCCCCCCCCHHHHHHHHHcC----CCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 265 GVPPFWGETEQSIFDAILRG----HIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 265 g~~pf~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
+..||...........+... .........+.++..+.+++.+||..+|++|||+.++.+
T Consensus 238 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~ 300 (304)
T cd05096 238 KEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHA 300 (304)
T ss_pred CCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence 66788877666555443221 111111122467899999999999999999999999953
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-42 Score=317.49 Aligned_cols=257 Identities=30% Similarity=0.550 Sum_probs=232.2
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
.+|.+...||.|+||.|.+|..+.+...||||++++.........+.-..|-++|.-...-|.++++..+|+.-+.+|+|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 56899999999999999999999999999999999887777777777777888887666678999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc-CCCC
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF-KPGD 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~-~~~~ 225 (520)
|||+.||+|.=++++-+++.++.+.-++..|+-||-+||++||++||||.+|||+ +..+++||+|||+++.- ..+.
T Consensus 429 MEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmL---d~eGHiKi~DFGmcKEni~~~~ 505 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIFDGV 505 (683)
T ss_pred EEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEe---ccCCceEeeecccccccccCCc
Confidence 9999999999999999999999999999999999999999999999999999999 56889999999999864 3344
Q ss_pred cccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Q 010013 226 VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (520)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (520)
...+++|||.|+|||++. ..|+..+|.||+||+||||+.|++||.+..+.++...|+.....++. .+|.++.+++
T Consensus 506 TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPK----slSkEAv~ic 581 (683)
T KOG0696|consen 506 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPK----SLSKEAVAIC 581 (683)
T ss_pred ceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCcc----cccHHHHHHH
Confidence 556789999999999886 56999999999999999999999999999999999999988777664 6799999999
Q ss_pred HHhcccCCCCCCC-----HHHHHcCCccccC
Q 010013 305 KKMLHADPKERLS-----AAEVLNHPWMRVD 330 (520)
Q Consensus 305 ~~~l~~dp~~Rps-----~~~~l~~~~~~~~ 330 (520)
..+|...|.+|.. -+++-.||||+..
T Consensus 582 kg~ltK~P~kRLGcg~~ge~di~~H~FFR~i 612 (683)
T KOG0696|consen 582 KGLLTKHPGKRLGCGPEGERDIREHPFFRRI 612 (683)
T ss_pred HHHhhcCCccccCCCCccccchhhCcchhhc
Confidence 9999999999984 3688899999753
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-41 Score=327.04 Aligned_cols=262 Identities=24% Similarity=0.349 Sum_probs=206.8
Q ss_pred cccccCCcccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEE
Q 010013 54 VGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133 (520)
Q Consensus 54 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l 133 (520)
...+...+....++.|.-...||+|+||.||+|...++ ..||||++....... ...|.+|+.++.+++ |||+|+|
T Consensus 62 ~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~-~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~-H~Nlv~L 136 (361)
T KOG1187|consen 62 LRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDG-TVVAVKRLSSNSGQG---EREFLNEVEILSRLR-HPNLVKL 136 (361)
T ss_pred cceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCC-CEEEEEEecCCCCcc---hhHHHHHHHHHhcCC-CcCcccE
Confidence 34455566677788899899999999999999999764 899999876543211 355999999999999 9999999
Q ss_pred EEEEEeCC-eEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcC---CeeecCCCCcEEeecCCCC
Q 010013 134 KGAYEDRH-SVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMG---VMHRDLKPENFLFSSSAED 207 (520)
Q Consensus 134 ~~~~~~~~-~~~lv~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~ 207 (520)
+|||.+.+ ...+|+||+++|+|.++|.... +++|..+.+|+.++++||+|||+.. |+||||||+|||+ +++
T Consensus 137 lGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILL---D~~ 213 (361)
T KOG1187|consen 137 LGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILL---DED 213 (361)
T ss_pred EEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeE---CCC
Confidence 99999888 5999999999999999998765 8999999999999999999999854 9999999999999 678
Q ss_pred CCeeEeecccccccCC-CCccccc-ccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhhCCCCCCCCC---HHHHHH--
Q 010013 208 SPLKATDFGLSVFFKP-GDVFKDL-VGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGET---EQSIFD-- 279 (520)
Q Consensus 208 ~~~kl~Dfg~a~~~~~-~~~~~~~-~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~---~~~~~~-- 279 (520)
..+||+|||+|+.... ....... .||.+|+|||++. +..+.++|||||||+|+||+||+.|..... ......
T Consensus 214 ~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~ 293 (361)
T KOG1187|consen 214 FNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWA 293 (361)
T ss_pred CCEEccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHH
Confidence 8999999999976554 3333333 8999999999986 578999999999999999999998876432 111111
Q ss_pred --HHHcCCC-CCCCCCC--CCCC-----HHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 280 --AILRGHI-DFSSDPW--PNIS-----SSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 280 --~~~~~~~-~~~~~~~--~~~~-----~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.+..+.. .+.++.+ ...+ ..+..+..+|++.+|.+||++.|+++
T Consensus 294 ~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 294 KPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK 347 (361)
T ss_pred HHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence 1222111 1111111 1222 23557788999999999999999754
|
|
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-40 Score=319.76 Aligned_cols=257 Identities=25% Similarity=0.343 Sum_probs=204.8
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+.+.||+|+||.||+|.++.+|+.||+|.+..... ......+..|+.++.+..+||||+++++++..++..+++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv 78 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVN--SQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWIC 78 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCC--cHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEE
Confidence 368899999999999999999999999999999865322 122344556777655555599999999999999999999
Q ss_pred EeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHc-CCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 147 MDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSM-GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~----~~~l~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
|||++ ++|.+.+.. ...+++..+..++.||+.||.|||++ +++||||||+||++ +.++.+||+|||++...
T Consensus 79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~---~~~~~~kl~dfg~~~~~ 154 (283)
T cd06617 79 MEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLI---NRNGQVKLCDFGISGYL 154 (283)
T ss_pred hhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEE---CCCCCEEEeeccccccc
Confidence 99996 577766643 34689999999999999999999997 99999999999999 45678999999999876
Q ss_pred CCCCcccccccCCCccCchhhcc-----cCCCcchhHHHHHHHHHHhhCCCCCCCCC-HHHHHHHHHcCCCCCCCCCCCC
Q 010013 222 KPGDVFKDLVGSAYYVAPEVLRR-----NYGAEADIWSAGVILYILLSGVPPFWGET-EQSIFDAILRGHIDFSSDPWPN 295 (520)
Q Consensus 222 ~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~Dv~slG~~l~~ll~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~ 295 (520)
..........|+..|+|||.+.+ .++.++|+|||||++|+|++|+.||.... ..+....+...... ..+...
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~ 232 (283)
T cd06617 155 VDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSP--QLPAEK 232 (283)
T ss_pred ccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCC--CCCccc
Confidence 44333334568889999998743 36789999999999999999999996532 22223333322111 111235
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 296 ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 296 ~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
+|.++.++|.+||..+|++|||+.++++||||....
T Consensus 233 ~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 268 (283)
T cd06617 233 FSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHL 268 (283)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcc
Confidence 789999999999999999999999999999998654
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-41 Score=333.99 Aligned_cols=251 Identities=25% Similarity=0.397 Sum_probs=202.5
Q ss_pred ccceeecceeeccCCeEEEEEEEcCC-----CcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDT-----KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~ 140 (520)
.++|.+++.||+|+||.||+|.+..+ +..||+|.+.... .....+.+.+|+.+++.+..||||+++++++...
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~ 114 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA--HTDEREALMSELKILSHLGQHKNIVNLLGACTHG 114 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC--CHHHHHHHHHHHHHHHhhccCCceeeEeeEecCC
Confidence 45799999999999999999986543 3579999986432 2233567889999999995599999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHhc----------------------------------------------------------
Q 010013 141 HSVNLIMDLCAGGELFDRIIAK---------------------------------------------------------- 162 (520)
Q Consensus 141 ~~~~lv~e~~~g~~L~~~l~~~---------------------------------------------------------- 162 (520)
+.+++||||+++|+|.+++...
T Consensus 115 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (374)
T cd05106 115 GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS 194 (374)
T ss_pred CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence 9999999999999999988542
Q ss_pred ------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCcc---
Q 010013 163 ------------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF--- 227 (520)
Q Consensus 163 ------------~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~--- 227 (520)
.++++..+..++.||+.||.|||++||+||||||+|||++ ++..+||+|||++.........
T Consensus 195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~---~~~~~kL~DfGla~~~~~~~~~~~~ 271 (374)
T cd05106 195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLT---DGRVAKICDFGLARDIMNDSNYVVK 271 (374)
T ss_pred ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEe---CCCeEEEeeceeeeeccCCcceeec
Confidence 2477888999999999999999999999999999999994 5677999999999865432211
Q ss_pred cccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHH
Q 010013 228 KDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305 (520)
Q Consensus 228 ~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 305 (520)
....+++.|+|||++. ..++.++|||||||++|+|++ |+.||..................... ...+++++.+++.
T Consensus 272 ~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~ 349 (374)
T cd05106 272 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSR--PDFAPPEIYSIMK 349 (374)
T ss_pred cCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccC--CCCCCHHHHHHHH
Confidence 1223456799999875 458999999999999999997 99999876554433333333322221 1346899999999
Q ss_pred HhcccCCCCCCCHHHHHc
Q 010013 306 KMLHADPKERLSAAEVLN 323 (520)
Q Consensus 306 ~~l~~dp~~Rps~~~~l~ 323 (520)
+||+.||++|||+.++++
T Consensus 350 ~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 350 MCWNLEPTERPTFSQISQ 367 (374)
T ss_pred HHcCCChhhCcCHHHHHH
Confidence 999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=320.89 Aligned_cols=249 Identities=24% Similarity=0.397 Sum_probs=210.4
Q ss_pred cceeecceeeccCCeEEEEEEEcCCC-----cEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTK-----QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~ 141 (520)
++|.+.+.||+|+||.||+|.+...+ ..+|+|.+.... .......+.+|+.+++++. ||||+++++++....
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~--~~~~~~~~~~ei~~l~~l~-h~~i~~~~~~~~~~~ 81 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA--EPKVQQEFRQEAELMSDLQ-HPNIVCLLGVCTKEQ 81 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC--CHHHHHHHHHHHHHHHhcC-CcccceEEEEEcCCC
Confidence 46889999999999999999986554 679999885432 2334567889999999998 999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCC
Q 010013 142 SVNLIMDLCAGGELFDRIIAK----------------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA 205 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~l~~~----------------~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~ 205 (520)
..+++|||+++++|.+++... ..+++..+..++.|++.||.|||++|++|+||||+||+++
T Consensus 82 ~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~--- 158 (283)
T cd05048 82 PTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVG--- 158 (283)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEc---
Confidence 999999999999999998764 4578899999999999999999999999999999999994
Q ss_pred CCCCeeEeecccccccCCCC---cccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHH
Q 010013 206 EDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDA 280 (520)
Q Consensus 206 ~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~ 280 (520)
+++.++|+|||++....... ......+++.|+|||.+. +.++.++|||||||++|+|++ |..||.+....+....
T Consensus 159 ~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~ 238 (283)
T cd05048 159 EGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEM 238 (283)
T ss_pred CCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 56779999999998653322 122345678899999875 568999999999999999998 9999999888888777
Q ss_pred HHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 281 ILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
+........ ...++..+.+|+.+||+.||.+|||+.+++++
T Consensus 239 i~~~~~~~~---~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 239 IRSRQLLPC---PEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred HHcCCcCCC---cccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 766543322 24688999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=316.98 Aligned_cols=251 Identities=27% Similarity=0.505 Sum_probs=208.9
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+.+.||+|+||.||+|.++.+++.+|+|.+.............+.+|+.++++++ ||||+++++++...+..++|
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLN-HPNVIKYLDSFIEDNELNIV 80 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCC-CcceeeeeeeEEECCeEEEE
Confidence 56999999999999999999999999999999886544444455567889999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 147 MDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~----~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
+||+++++|.+++.. ...+++..+..++.||+.||.|||++|++|+||||+||+++ .++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~---~~~~~~l~d~g~~~~~~ 157 (267)
T cd08228 81 LELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFIT---ATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEc---CCCCEEECccccceecc
Confidence 999999999887753 34589999999999999999999999999999999999994 56679999999988764
Q ss_pred CCC-cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCH--HHHHHHHHcCCCCCCCCCCCCCCH
Q 010013 223 PGD-VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETE--QSIFDAILRGHIDFSSDPWPNISS 298 (520)
Q Consensus 223 ~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 298 (520)
... ......|++.|+|||.+.+ .++.++|+||||+++|+|++|..||..... ......+.... .+......++.
T Consensus 158 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 235 (267)
T cd08228 158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCD--YPPLPTEHYSE 235 (267)
T ss_pred chhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCC--CCCCChhhcCH
Confidence 322 1233568889999998764 478899999999999999999999965432 33444443322 22222345778
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 299 SAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 299 ~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.+.+++.+||..+|++|||+.++++
T Consensus 236 ~~~~li~~cl~~~p~~Rp~~~~vl~ 260 (267)
T cd08228 236 KLRELVSMCIYPDPDQRPDIGYVHQ 260 (267)
T ss_pred HHHHHHHHHCCCCcccCcCHHHHHH
Confidence 9999999999999999999999987
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=331.20 Aligned_cols=261 Identities=30% Similarity=0.447 Sum_probs=209.3
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC---
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--- 140 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~--- 140 (520)
.+.++|.+.+.||+|+||.||+|.+..+++.+|+|.+.... ......+.+.+|+.+++++. ||||+++++++...
T Consensus 13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~ 90 (353)
T cd07850 13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPF-QNVTHAKRAYRELVLMKLVN-HKNIIGLLNVFTPQKSL 90 (353)
T ss_pred hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccc-cChhHHHHHHHHHHHHHhcC-CCCCcceeeeeccCCCc
Confidence 45688999999999999999999999999999999885432 23334566788999999998 99999999988643
Q ss_pred ---CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccc
Q 010013 141 ---HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (520)
Q Consensus 141 ---~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~ 217 (520)
...|+||||+. ++|.+.+... +++..+..++.|++.||.|||++||+||||||+||+++ .++.+||+|||+
T Consensus 91 ~~~~~~~lv~e~~~-~~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~---~~~~~kL~Dfg~ 164 (353)
T cd07850 91 EEFQDVYLVMELMD-ANLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---SDCTLKILDFGL 164 (353)
T ss_pred cccCcEEEEEeccC-CCHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC---CCCCEEEccCcc
Confidence 35799999995 4888877543 89999999999999999999999999999999999994 567899999999
Q ss_pred ccccCCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCC-----------
Q 010013 218 SVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH----------- 285 (520)
Q Consensus 218 a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~----------- 285 (520)
+.............+++.|+|||.+.+ .++.++|||||||++|+|++|+.||...........+....
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (353)
T cd07850 165 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRL 244 (353)
T ss_pred ceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHh
Confidence 987654444445568899999998764 58999999999999999999999998766443333322100
Q ss_pred -----------CCCC---------CC--------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 286 -----------IDFS---------SD--------PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 286 -----------~~~~---------~~--------~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
.... .. .....+..+.++|.+||+.||++|||+.++|+||||.....
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~~~ 319 (353)
T cd07850 245 QPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVWYD 319 (353)
T ss_pred hhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhccC
Confidence 0000 00 01134567899999999999999999999999999975433
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-40 Score=320.72 Aligned_cols=260 Identities=28% Similarity=0.470 Sum_probs=210.1
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+.+.||+|++|.||+|.++.+++.+|+|.+..... .....+.+.+|+.+++++. ||||+++++++.+...+++|
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 79 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQE-DEGVPSTAIREISLLKEMQ-HGNIVRLQDVVHSEKRLYLV 79 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccc-cccchHHHHHHHHHHHhcc-CCCEeeEEEEEecCCeEEEE
Confidence 469999999999999999999999999999998865432 2233466888999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 147 MDLCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~--l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
|||++ ++|.+.+..... +++..+..++.||+.||.|||++|++|+||+|+||+++. .+..+||+|||++......
T Consensus 80 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~--~~~~~kl~dfg~~~~~~~~ 156 (294)
T PLN00009 80 FEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDR--RTNALKLADFGLARAFGIP 156 (294)
T ss_pred Eeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEEC--CCCEEEEcccccccccCCC
Confidence 99995 578887765443 578889999999999999999999999999999999963 3456999999999765322
Q ss_pred -CcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCC-------------
Q 010013 225 -DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDF------------- 288 (520)
Q Consensus 225 -~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~------------- 288 (520)
.......+++.|+|||.+.+ .++.++||||||+++|+|++|..||......+....+.......
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (294)
T PLN00009 157 VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPD 236 (294)
T ss_pred ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchh
Confidence 12234467889999998754 47889999999999999999999998776655444432211000
Q ss_pred --------CC----CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 289 --------SS----DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 289 --------~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
.. ...+.++..+.+++.+||+.+|++||++.++++||||....
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~ 291 (294)
T PLN00009 237 YKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLG 291 (294)
T ss_pred hhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHHh
Confidence 00 01245788999999999999999999999999999998543
|
|
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=321.97 Aligned_cols=256 Identities=33% Similarity=0.526 Sum_probs=211.0
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+.+.||+|+||.||+|.+..+++.||+|++..... .....+.+.+|+++++++. |+||+++++++..++..++|
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~iv 78 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED-DEDVKKTALREVKVLRQLR-HENIVNLKEAFRRKGRLYLV 78 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc-cccchhHHHHHHHHHHhcC-CCCeeehhheEEECCEEEEE
Confidence 369999999999999999999999999999998864332 3344578899999999999 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC-
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~- 225 (520)
|||++++.+.....+...+++..+..++.||+.||.|||+.|++|+||+|+||+++ +++.+||+|||++.......
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~---~~~~~kl~d~g~~~~~~~~~~ 155 (288)
T cd07833 79 FEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVS---ESGVLKLCDFGFARALRARPA 155 (288)
T ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCCEEEEeeecccccCCCcc
Confidence 99999877766666666799999999999999999999999999999999999994 57789999999988765433
Q ss_pred -cccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC----------------
Q 010013 226 -VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI---------------- 286 (520)
Q Consensus 226 -~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~---------------- 286 (520)
......++..|+|||++.+ .++.++||||||+++|++++|..||.+....+....+.....
T Consensus 156 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07833 156 SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRF 235 (288)
T ss_pred ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccc
Confidence 2344567889999998753 478899999999999999999999987665443332221000
Q ss_pred ---CCCC---------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 287 ---DFSS---------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 287 ---~~~~---------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
.+.. .....++..+.++|.+||..+|++|||+.++++||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 236 AGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred cccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 0000 0011248889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=350.70 Aligned_cols=253 Identities=28% Similarity=0.370 Sum_probs=205.7
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+.+.||+|+||.||+|.+..+++.||+|++...........+++.+|+.+++++. ||||+++++++.+++..++|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~-HPNIVkl~~v~~d~~~lyLV 80 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLI-HPGIVPVYSICSDGDPVYYT 80 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCC-CcCcCeEEEEEeeCCEEEEE
Confidence 57999999999999999999999999999999987544333444567899999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeec
Q 010013 147 MDLCAGGELFDRIIAK-----------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDF 215 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~-----------~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Df 215 (520)
|||++|++|.+++... ..++...+..++.||+.||.|||++||+||||||+||++ +.++.++|+||
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILL---d~dg~vKLiDF 157 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILL---GLFGEVVILDW 157 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEE---cCCCCEEEEec
Confidence 9999999999988642 235567788999999999999999999999999999999 45677999999
Q ss_pred ccccccCCCC-------------------cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHH
Q 010013 216 GLSVFFKPGD-------------------VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQ 275 (520)
Q Consensus 216 g~a~~~~~~~-------------------~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~ 275 (520)
|++....... .....+||+.|+|||++.+ .++.++|||||||++|+|++|..||......
T Consensus 158 GLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ 237 (932)
T PRK13184 158 GAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGR 237 (932)
T ss_pred CcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchh
Confidence 9998652100 0112469999999998864 5889999999999999999999999876544
Q ss_pred HHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 276 SIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
........ ..+....++..+++.+.+++.+||..||++||+..+.+.+
T Consensus 238 ki~~~~~i-~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~ 285 (932)
T PRK13184 238 KISYRDVI-LSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQ 285 (932)
T ss_pred hhhhhhhc-cChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 33322111 1111122335788999999999999999999987776644
|
|
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-40 Score=317.44 Aligned_cols=256 Identities=30% Similarity=0.531 Sum_probs=213.4
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhcc--CCCCeeEEEEEEEeCCeEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT--GHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~--~hp~iv~l~~~~~~~~~~~l 145 (520)
.|.+.+.||+|+||.||+|.+..+++.+|+|.+.... .....+.+.+|+.+++++. .|||++++++++......++
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT--PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC--CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence 4788899999999999999999999999999886432 2334567889999999996 59999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
||||++|++|.+++.. +.+++..+..++.|++.||.|||+.|++|+||+|+||+++ .++.++|+|||.+.......
T Consensus 80 v~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~---~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06917 80 IMEYAEGGSVRTLMKA-GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVT---NTGNVKLCDFGVAALLNQNS 155 (277)
T ss_pred EEecCCCCcHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEc---CCCCEEEccCCceeecCCCc
Confidence 9999999999988755 4799999999999999999999999999999999999995 46789999999988765433
Q ss_pred -cccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHH
Q 010013 226 -VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (520)
Q Consensus 226 -~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (520)
......|+..|+|||.+.+ .++.++||||||+++|+|++|..||...........+.... .+......++.++.+
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 233 (277)
T cd06917 156 SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSK--PPRLEDNGYSKLLRE 233 (277)
T ss_pred cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccCC--CCCCCcccCCHHHHH
Confidence 2234568899999998754 36889999999999999999999998776554443332221 111112237889999
Q ss_pred HHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 303 IVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 303 li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
++.+||..||++||++.++++|+||+...
T Consensus 234 ~i~~~l~~~p~~R~~~~~il~~~~~~~~~ 262 (277)
T cd06917 234 FVAACLDEEPKERLSAEELLKSKWIKAHS 262 (277)
T ss_pred HHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence 99999999999999999999999997543
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-40 Score=319.85 Aligned_cols=257 Identities=24% Similarity=0.351 Sum_probs=213.7
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|++.+.||+|+||+||++.+..+++.+|+|++.... .....+.+.+|+.+++.+. ||||+++++++.....+++|
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 81 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA--KSSVRKQILRELQIMHECR-SPYIVSFYGAFLNENNICMC 81 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC--cchHHHHHHHHHHHHHHcC-CCCcceEeeeEecCCEEEEE
Confidence 57899999999999999999999999999999875432 2334577899999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
|||+++++|.+++...+.+++..+..++.+++.||.|||+ .|++|+||+|+||++ +.++.++|+|||++......
T Consensus 82 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~---~~~~~~~l~d~gl~~~~~~~- 157 (284)
T cd06620 82 MEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILV---NSRGQIKLCDFGVSGELINS- 157 (284)
T ss_pred EecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEE---CCCCcEEEccCCcccchhhh-
Confidence 9999999999998888889999999999999999999997 699999999999999 45678999999998764322
Q ss_pred cccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHH-----------HHHHHHHcCCCCCCCCCC
Q 010013 226 VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQ-----------SIFDAILRGHIDFSSDPW 293 (520)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~-----------~~~~~~~~~~~~~~~~~~ 293 (520)
......|+..|+|||++. +.++.++|||||||++|++++|..||...... .....+...... ....
T Consensus 158 ~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 235 (284)
T cd06620 158 IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPP--RLPS 235 (284)
T ss_pred ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCC--CCCc
Confidence 123457899999999875 46888999999999999999999999765442 222222222111 1111
Q ss_pred CCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 294 PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 294 ~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
..++..+.+|+.+||..||++|||+.++++|+||.....
T Consensus 236 ~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~~~ 274 (284)
T cd06620 236 SDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQALR 274 (284)
T ss_pred hhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccc
Confidence 247889999999999999999999999999999975443
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-40 Score=314.66 Aligned_cols=254 Identities=29% Similarity=0.466 Sum_probs=217.1
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 147 (520)
.|.+.+.||+|++|.||+|.+..+++.+++|++..... ....+.+.+|+..+.++. ||||+++++++......++||
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~--~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGD--EEFRKQLLRELKTLRSCE-SPYVVKCYGAFYKEGEISIVL 78 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcc--hHHHHHHHHHHHHHHhcC-CCCeeeEEEEEccCCeEEEEE
Confidence 58889999999999999999999999999999865432 134577899999999998 999999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCc
Q 010013 148 DLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226 (520)
Q Consensus 148 e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 226 (520)
||+++++|.+++.....+++..+..++.|++.||.|||+ .|++|+||+|+||+++ .++.++|+|||.+........
T Consensus 79 e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~---~~~~~~l~df~~~~~~~~~~~ 155 (264)
T cd06623 79 EYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLIN---SKGEVKIADFGISKVLENTLD 155 (264)
T ss_pred EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEEC---CCCCEEEccCccceecccCCC
Confidence 999999999999888889999999999999999999999 9999999999999994 567899999999887654332
Q ss_pred c-cccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCC---CHHHHHHHHHcCCCCCCCCCCCC-CCHHH
Q 010013 227 F-KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGE---TEQSIFDAILRGHIDFSSDPWPN-ISSSA 300 (520)
Q Consensus 227 ~-~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 300 (520)
. ....++..|+|||.+.. .++.++|+||||+++|+|++|..||... ...+....+........ ... ++..+
T Consensus 156 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l 232 (264)
T cd06623 156 QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSL---PAEEFSPEF 232 (264)
T ss_pred cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCCC---CcccCCHHH
Confidence 2 24567889999998864 4788999999999999999999999776 34444555543322211 123 78999
Q ss_pred HHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 301 ~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
.++|.+||..+|++|||+.++++|||++..
T Consensus 233 ~~li~~~l~~~p~~R~~~~~ll~~~~~~~~ 262 (264)
T cd06623 233 RDFISACLQKDPKKRPSAAELLQHPFIKKA 262 (264)
T ss_pred HHHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence 999999999999999999999999999753
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-40 Score=317.34 Aligned_cols=257 Identities=31% Similarity=0.538 Sum_probs=216.0
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
..|...+.||+|++|.||++.+..+++.+++|++... .....+.+.+|+.+++.+. ||||+++++++...+..+++
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~~~-h~~vv~~~~~~~~~~~~~~v 94 (285)
T cd06648 19 SYLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLR---KQQRRELLFNEVVIMRDYQ-HPNIVEMYSSYLVGDELWVV 94 (285)
T ss_pred HhhhcceEeccCCCeEEEEEEECCCCCEEEEEEEecc---chhHHHHHHHHHHHHHHcC-CCChheEEEEEEcCCeEEEE
Confidence 3455568999999999999999988999999987532 2233466889999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC-
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~- 225 (520)
+||++|++|.+++.. ++++...+..++.|++.||.|||++|++||||+|+||++ +.++.++|+|||.+.......
T Consensus 95 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~~l~d~g~~~~~~~~~~ 170 (285)
T cd06648 95 MEFLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILL---TSDGRVKLSDFGFCAQVSKEVP 170 (285)
T ss_pred EeccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEE---cCCCcEEEcccccchhhccCCc
Confidence 999999999998877 679999999999999999999999999999999999999 456789999999887653221
Q ss_pred cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Q 010013 226 VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (520)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (520)
......|++.|+|||.+.+ .++.++||||||+++|+|++|..||...........+......... ....++..+.+++
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li 249 (285)
T cd06648 171 RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLK-NLHKVSPRLRSFL 249 (285)
T ss_pred ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCc-ccccCCHHHHHHH
Confidence 2233468899999999865 4888999999999999999999999887766666666554322221 2234789999999
Q ss_pred HHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 305 KKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 305 ~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
.+||+.+|++|||+.++++||||+....
T Consensus 250 ~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 277 (285)
T cd06648 250 DRMLVRDPAQRATAAELLNHPFLAKAGP 277 (285)
T ss_pred HHHcccChhhCcCHHHHccCcccccCCC
Confidence 9999999999999999999999987654
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-41 Score=321.58 Aligned_cols=254 Identities=35% Similarity=0.698 Sum_probs=220.0
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+.+.||+|+||.||+|.+..+++.+|+|++...........+.+.+|+.+++++.+||||+++++++...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 36899999999999999999999999999999987654444444567889999999997799999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC-
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~- 225 (520)
||++++++|.+.+.+.+.+++..+..++.|++.||.+||+.|++|+||+|+||+++ .++.++|+|||.+.......
T Consensus 81 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~---~~~~~~l~df~~~~~~~~~~~ 157 (280)
T cd05581 81 LEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLD---KDMHIKITDFGTAKVLDPNSS 157 (280)
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC---CCCCEEecCCccccccCCccc
Confidence 99999999999998888899999999999999999999999999999999999994 56789999999988654322
Q ss_pred --------------------cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC
Q 010013 226 --------------------VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG 284 (520)
Q Consensus 226 --------------------~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~ 284 (520)
......++..|+|||.+.. .++.++||||||++++++++|..||...........+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~ 237 (280)
T cd05581 158 PESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKL 237 (280)
T ss_pred cccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhc
Confidence 1123457889999998764 4788999999999999999999999888776666666654
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH----HHHHcCCcc
Q 010013 285 HIDFSSDPWPNISSSAKDIVKKMLHADPKERLSA----AEVLNHPWM 327 (520)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~----~~~l~~~~~ 327 (520)
...++ ..+++.+.++|.+||+.+|++|||+ .++|+||||
T Consensus 238 ~~~~~----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 238 EYSFP----PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred CCCCC----CccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 44333 3568999999999999999999999 999999997
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-40 Score=319.06 Aligned_cols=254 Identities=30% Similarity=0.483 Sum_probs=203.2
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
+.|.+.+.||+|++|.||+|.++.+++.||+|.+..... ......+.+|+.+++++. ||||+++++++.+....++|
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 81 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHE--EGAPFTAIREASLLKDLK-HANIVTLHDIIHTKKTLTLV 81 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccc--cCCchhHHHHHHHHhhCC-CcceeeEEEEEecCCeEEEE
Confidence 579999999999999999999998899999999864322 112244668999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC-
Q 010013 147 MDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG- 224 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~- 224 (520)
|||+.+ +|.+++... ..+++..+..++.|++.||.|||+.|++||||||+||+++ .++.+||+|||++......
T Consensus 82 ~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~~~~~~~~ 157 (291)
T cd07844 82 FEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLIS---ERGELKLADFGLARAKSVPS 157 (291)
T ss_pred EecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEc---CCCCEEECccccccccCCCC
Confidence 999975 898888764 4689999999999999999999999999999999999994 5677999999998754321
Q ss_pred CcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCC-HHHHHHHHHcCCCC--------------
Q 010013 225 DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGET-EQSIFDAILRGHID-------------- 287 (520)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~-~~~~~~~~~~~~~~-------------- 287 (520)
.......++..|+|||.+.+ .++.++||||+|+++|+|++|..||.+.. ..+....+.+....
T Consensus 158 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (291)
T cd07844 158 KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPE 237 (291)
T ss_pred ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccc
Confidence 11223356888999998753 47889999999999999999999997665 22222222110000
Q ss_pred -----CC-------CCCCCCCC--HHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 288 -----FS-------SDPWPNIS--SSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 288 -----~~-------~~~~~~~~--~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
.. ....+.++ ..+.+++.+||+.+|++|||+.++|+||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 238 FKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred cccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 00 00112334 788999999999999999999999999998
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=328.14 Aligned_cols=261 Identities=31% Similarity=0.517 Sum_probs=207.6
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC----
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR---- 140 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~---- 140 (520)
+.++|.+.+.||+|+||.||+|.+..+|+.||+|.+.... .......+.+|+.++++++ ||||+++++++...
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 79 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE--HQTFCQRTLREIKILRRFK-HENIIGILDIIRPPSFES 79 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc--cchhHHHHHHHHHHHHhCC-CCCcCchhheeecccccc
Confidence 4578999999999999999999999999999999985321 2234466788999999998 99999999886543
Q ss_pred -CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccc
Q 010013 141 -HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (520)
Q Consensus 141 -~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~ 219 (520)
...++|+||+.+ +|.+.+. .+.+++..+..++.|++.||.|||+.||+||||||+||++ +.++.+||+|||++.
T Consensus 80 ~~~~~lv~e~~~~-~l~~~~~-~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill---~~~~~~kl~dfg~~~ 154 (336)
T cd07849 80 FNDVYIVQELMET-DLYKLIK-TQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTNCDLKICDFGLAR 154 (336)
T ss_pred cceEEEEehhccc-CHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---CCCCCEEECccccee
Confidence 358999999964 7877664 4579999999999999999999999999999999999999 456779999999987
Q ss_pred ccCCCC----cccccccCCCccCchhhc--ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCC--------
Q 010013 220 FFKPGD----VFKDLVGSAYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH-------- 285 (520)
Q Consensus 220 ~~~~~~----~~~~~~gt~~y~aPE~~~--~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~-------- 285 (520)
...... ......|++.|+|||.+. ..++.++|||||||++|+|++|+.||.+.........+....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 234 (336)
T cd07849 155 IADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDL 234 (336)
T ss_pred eccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHH
Confidence 653322 112356889999999864 347889999999999999999999997765433222211100
Q ss_pred --------------CCC-CC----CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCCC
Q 010013 286 --------------IDF-SS----DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDA 333 (520)
Q Consensus 286 --------------~~~-~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~~ 333 (520)
... .. ...+.++..+.+++.+||+.+|++|||+.++++||||......
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~~ 301 (336)
T cd07849 235 NCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHDP 301 (336)
T ss_pred HHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCCC
Confidence 000 00 0123567889999999999999999999999999999876554
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-41 Score=321.84 Aligned_cols=255 Identities=27% Similarity=0.455 Sum_probs=213.1
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.+.|...+.||+|+||.||+|.+..++..+|+|.+.... .....+.+.+|+.+++++. ||||+++++++..+..+++
T Consensus 3 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l 79 (277)
T cd06642 3 EELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE--AEDEIEDIQQEITVLSQCD-SPYITRYYGSYLKGTKLWI 79 (277)
T ss_pred HHHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEecccc--chHHHHHHHHHHHHHHcCC-CCccHhhhcccccCCceEE
Confidence 356888899999999999999999889999999886432 2234567899999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
||||+++++|.+++.. +.+++..+..++.|++.||.|||++|++|+||+|+||+++ .++.++|+|||++.......
T Consensus 80 v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~---~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06642 80 IMEYLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLS---EQGDVKLADFGVAGQLTDTQ 155 (277)
T ss_pred EEEccCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEe---CCCCEEEccccccccccCcc
Confidence 9999999999987754 5789999999999999999999999999999999999994 56779999999987764332
Q ss_pred -cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHH
Q 010013 226 -VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (520)
Q Consensus 226 -~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (520)
......|+..|+|||++.+ .++.++|||||||++|++++|..||...........+...... .....++..+.++
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l 232 (277)
T cd06642 156 IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPP---TLEGQYSKPFKEF 232 (277)
T ss_pred hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCCCC---CCCcccCHHHHHH
Confidence 1223467889999999865 4788999999999999999999999766554444443332211 1123567899999
Q ss_pred HHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 304 VKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 304 i~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
+.+||+.+|++|||+.++++||||...
T Consensus 233 i~~~l~~~p~~Rp~~~~il~~~~~~~~ 259 (277)
T cd06642 233 VEACLNKDPRFRPTAKELLKHKFITRY 259 (277)
T ss_pred HHHHccCCcccCcCHHHHHHhHHHHHH
Confidence 999999999999999999999999754
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=317.24 Aligned_cols=249 Identities=35% Similarity=0.629 Sum_probs=216.0
Q ss_pred eeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCCCc
Q 010013 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGE 154 (520)
Q Consensus 75 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~g~~ 154 (520)
||.|+||.||++.+..+++.+++|.+...........+.+.+|+.+++++. ||||+++++.+..+...|++|||+++++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQ-SPYVVKLYYSFQGKKNLYLVMEYLPGGD 79 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCC-CcchhHHHHheecCcEEEEEEecCCCCc
Confidence 689999999999999889999999987655444455678999999999998 9999999999999999999999999999
Q ss_pred hHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC---------
Q 010013 155 LFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD--------- 225 (520)
Q Consensus 155 L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~--------- 225 (520)
|.+++.+.+.+++..+..++.||+.||.|||+.|++|+||+|+||+++ .++.++|+|||++.......
T Consensus 80 L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 156 (265)
T cd05579 80 LASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILID---SNGHLKLTDFGLSKVGLVRRQINLNDDEK 156 (265)
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEc---CCCCEEEEecccchhcccCcccccccccc
Confidence 999998877899999999999999999999999999999999999994 56789999999987653321
Q ss_pred cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Q 010013 226 VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (520)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (520)
......++..|+|||.+.. ..+.++||||||+++|++++|..||...........+..+...++.. ..++..+.+++
T Consensus 157 ~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i 234 (265)
T cd05579 157 EDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPED--VEVSDEAIDLI 234 (265)
T ss_pred cccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCcc--ccCCHHHHHHH
Confidence 1233467889999998764 47889999999999999999999999888888777777655444332 23589999999
Q ss_pred HHhcccCCCCCCCH---HHHHcCCcccc
Q 010013 305 KKMLHADPKERLSA---AEVLNHPWMRV 329 (520)
Q Consensus 305 ~~~l~~dp~~Rps~---~~~l~~~~~~~ 329 (520)
.+||+.+|++|||+ .++|+||||..
T Consensus 235 ~~~l~~~p~~Rpt~~~~~~~l~~~~~~~ 262 (265)
T cd05579 235 SKLLVPDPEKRLGAKSIEEIKNHPFFKG 262 (265)
T ss_pred HHHhcCCHhhcCCCccHHHHhcCccccC
Confidence 99999999999999 99999999973
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=321.24 Aligned_cols=258 Identities=23% Similarity=0.339 Sum_probs=206.5
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|...+.||+|+||.||++.+..+++.+|+|.+..... ......+.+|+.++.++.+||||+++++++..++..+++
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~ 81 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVD--EKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWIC 81 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccC--hHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEE
Confidence 346677899999999999999999999999999865432 134567889999999997799999999999999999999
Q ss_pred EeccCCCchHHH---HH--hcCCCCHHHHHHHHHHHHHHHHHHHHc-CCeeecCCCCcEEeecCCCCCCeeEeecccccc
Q 010013 147 MDLCAGGELFDR---II--AKGHYSERAAANLCRQMVTVVHYCHSM-GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (520)
Q Consensus 147 ~e~~~g~~L~~~---l~--~~~~l~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 220 (520)
|||+.+ ++.+. +. ..+.+++..+..++.|++.||+|||+. |++||||||+||+++ .++.++|+|||++..
T Consensus 82 ~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~---~~~~~kl~dfg~~~~ 157 (288)
T cd06616 82 MELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLD---RNGNIKLCDFGISGQ 157 (288)
T ss_pred EecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEc---cCCcEEEeecchhHH
Confidence 999854 54443 22 235799999999999999999999974 999999999999994 466799999999987
Q ss_pred cCCCCcccccccCCCccCchhhcc----cCCCcchhHHHHHHHHHHhhCCCCCCCCCH-HHHHHHHHcCCC-CCCCCCCC
Q 010013 221 FKPGDVFKDLVGSAYYVAPEVLRR----NYGAEADIWSAGVILYILLSGVPPFWGETE-QSIFDAILRGHI-DFSSDPWP 294 (520)
Q Consensus 221 ~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~-~~~~~~~~~~~~-~~~~~~~~ 294 (520)
...........|++.|+|||.+.+ .++.++|||||||++|+|++|+.||..... .+....+..+.. ........
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T cd06616 158 LVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEER 237 (288)
T ss_pred hccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCC
Confidence 654433344568899999998864 478899999999999999999999976542 122222222221 12222223
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 295 NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 295 ~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
.++..+.+|+.+||+.+|++|||+.++++||||+..
T Consensus 238 ~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~ 273 (288)
T cd06616 238 EFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDY 273 (288)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhch
Confidence 578999999999999999999999999999999753
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-40 Score=316.64 Aligned_cols=248 Identities=28% Similarity=0.438 Sum_probs=200.8
Q ss_pred eeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHH---HHhccCCCCeeEEEEEEEeCCeEEEEEecc
Q 010013 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI---MHHLTGHRNIVELKGAYEDRHSVNLIMDLC 150 (520)
Q Consensus 74 ~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~---l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~ 150 (520)
.||+|+||.||+|.+..+++.||+|.+.+..............|..+ ++... ||+|+.+++++...+..++||||+
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~v~e~~ 79 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD-CPFIVCMSYAFHTPDKLSFILDLM 79 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCC-CCcEeeeeeeeecCCEEEEEEecC
Confidence 48999999999999999999999999876543222222233344333 33344 999999999999999999999999
Q ss_pred CCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCccccc
Q 010013 151 AGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL 230 (520)
Q Consensus 151 ~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 230 (520)
+|++|..++...+.+++..+..++.|++.||.|||+.+++||||||+||+++ .++.++|+|||++....... ....
T Consensus 80 ~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~---~~~~~kl~dfg~~~~~~~~~-~~~~ 155 (278)
T cd05606 80 NGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD---EHGHVRISDLGLACDFSKKK-PHAS 155 (278)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEEC---CCCCEEEccCcCccccCccC-CcCc
Confidence 9999999998888899999999999999999999999999999999999994 56779999999987654322 2345
Q ss_pred ccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCC---HHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHH
Q 010013 231 VGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGET---EQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305 (520)
Q Consensus 231 ~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 305 (520)
.|+..|+|||.+.+ .++.++||||+|+++|+|++|..||.... .............. ....++..+.+++.
T Consensus 156 ~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~s~~~~~li~ 231 (278)
T cd05606 156 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVE----LPDSFSPELRSLLE 231 (278)
T ss_pred CCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCC----CCCcCCHHHHHHHH
Confidence 78999999999853 47899999999999999999999997763 22322222222222 22356899999999
Q ss_pred HhcccCCCCCC-----CHHHHHcCCccccC
Q 010013 306 KMLHADPKERL-----SAAEVLNHPWMRVD 330 (520)
Q Consensus 306 ~~l~~dp~~Rp-----s~~~~l~~~~~~~~ 330 (520)
+||..+|.+|| ++.++++||||+..
T Consensus 232 ~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~ 261 (278)
T cd05606 232 GLLQRDVNRRLGCLGRGAQEVKEHPFFRSL 261 (278)
T ss_pred HHhhcCHHhccCCCCCCHHHHHhCccccCC
Confidence 99999999999 99999999999754
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=328.52 Aligned_cols=263 Identities=29% Similarity=0.488 Sum_probs=212.3
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC----
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR---- 140 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~---- 140 (520)
+..+|.+.+.||+|+||.||+|.+..+++.||+|.+.... ........+.+|+.+++.+. ||||+++++++...
T Consensus 3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~ni~~~~~~~~~~~~~~ 80 (337)
T cd07858 3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAF-DNRIDAKRTLREIKLLRHLD-HENVIAIKDIMPPPHREA 80 (337)
T ss_pred cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccc-cccchhHHHHHHHHHHHhcC-CCCccchHHheecccccc
Confidence 4568999999999999999999999999999999986432 23334456778999999998 99999999987644
Q ss_pred -CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccc
Q 010013 141 -HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (520)
Q Consensus 141 -~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~ 219 (520)
...++|+||+. ++|.+++...+.+++..+..++.|++.||.|||++|++||||||+||+++ .++.+||+|||++.
T Consensus 81 ~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~---~~~~~kL~Dfg~~~ 156 (337)
T cd07858 81 FNDVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLN---ANCDLKICDFGLAR 156 (337)
T ss_pred cCcEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc---CCCCEEECcCcccc
Confidence 35899999995 68999888888899999999999999999999999999999999999994 46779999999998
Q ss_pred ccCCC-CcccccccCCCccCchhhc--ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCC-----------
Q 010013 220 FFKPG-DVFKDLVGSAYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH----------- 285 (520)
Q Consensus 220 ~~~~~-~~~~~~~gt~~y~aPE~~~--~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~----------- 285 (520)
..... .......++..|+|||.+. ..++.++|||||||++|+|++|+.||.+.........+....
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (337)
T cd07858 157 TTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFI 236 (337)
T ss_pred ccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhc
Confidence 76433 2223446788999999875 358899999999999999999999997765433222221100
Q ss_pred ------------CCCC----CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCCC
Q 010013 286 ------------IDFS----SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDA 333 (520)
Q Consensus 286 ------------~~~~----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~~ 333 (520)
.... ....+.++..+.++|.+||+.+|++|||+.++|+||||......
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~ 300 (337)
T cd07858 237 RNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDP 300 (337)
T ss_pred CchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCc
Confidence 0000 01134678999999999999999999999999999999765443
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-41 Score=330.21 Aligned_cols=246 Identities=35% Similarity=0.563 Sum_probs=213.4
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
.+.+.|.+...+|.|+|+.|-.+.++.+++.+++|++.+... ...+|+.++....+||||+++.+.+.++.+.
T Consensus 319 ~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~-------~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~ 391 (612)
T KOG0603|consen 319 PFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD-------DNQDEIPISLLVRDHPNIVKSHDVYEDGKEI 391 (612)
T ss_pred CcchhhccccccCCCCccceeeeeccccccchhheecccccc-------ccccccchhhhhcCCCcceeecceecCCcee
Confidence 366789999999999999999999999999999999976522 2346777777788899999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
|+|||.+.|+-+.+.+...+.+. ..+..|+.+|+.|+.|||++|+|||||||+|||+. +..++++|+|||.++....
T Consensus 392 ~~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~--~~~g~lrltyFG~a~~~~~ 468 (612)
T KOG0603|consen 392 YLVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLD--GSAGHLRLTYFGFWSELER 468 (612)
T ss_pred eeeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeec--CCCCcEEEEEechhhhCch
Confidence 99999999999999887766555 78888999999999999999999999999999995 3567899999999998765
Q ss_pred CCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCCCCHHHH
Q 010013 224 GDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQ-SIFDAILRGHIDFSSDPWPNISSSAK 301 (520)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (520)
. ....+-|..|.|||++.. .|+.++|+||||++||+||+|+.||...... ++...+..+... ..+|..++
T Consensus 469 ~--~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s------~~vS~~AK 540 (612)
T KOG0603|consen 469 S--CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKFS------ECVSDEAK 540 (612)
T ss_pred h--hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCccc------cccCHHHH
Confidence 4 334456889999999975 5999999999999999999999999887665 555555444332 57899999
Q ss_pred HHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 302 DIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 302 ~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
+||+.||++||.+||++.+++.||||
T Consensus 541 dLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 541 DLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred HHHHHhccCChhhCcChhhhccCcch
Confidence 99999999999999999999999999
|
|
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-40 Score=322.59 Aligned_cols=250 Identities=26% Similarity=0.371 Sum_probs=203.1
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcE--EEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQ--FACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~--~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
+.|.+.+.||+|+||.||+|.++.++.. +|+|.+.. .........+.+|+.++.++.+||||+++++++...+.++
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~--~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~ 84 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE--YASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 84 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecc--cCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCce
Confidence 4688999999999999999999877754 46666542 2233345678899999999955999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCC
Q 010013 145 LIMDLCAGGELFDRIIAKG----------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDS 208 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~----------------~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~ 208 (520)
+||||+++++|.+++...+ .+++..+..++.||+.||.|||++|++||||||+|||++ .++
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~---~~~ 161 (303)
T cd05088 85 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---ENY 161 (303)
T ss_pred EEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEec---CCC
Confidence 9999999999999987542 478999999999999999999999999999999999994 567
Q ss_pred CeeEeecccccccCCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCC
Q 010013 209 PLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHI 286 (520)
Q Consensus 209 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~ 286 (520)
.+||+|||++.............++..|+|||.+.+ .++.++|||||||++|+|++ |..||.+....+....+.....
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~ 241 (303)
T cd05088 162 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 241 (303)
T ss_pred cEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCc
Confidence 799999999864322111111234567999998864 47899999999999999998 9999988777666665543311
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 287 DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 287 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
......++..+.+++.+||+.+|++|||+.++|++
T Consensus 242 ---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 242 ---LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred ---CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 11223578899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-40 Score=312.13 Aligned_cols=248 Identities=30% Similarity=0.540 Sum_probs=212.3
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 147 (520)
+|.+.+.||+|+||.||++.+..+++.+|+|.+.... .....+.+.+|+.+++.+. ||||+++++.+.+...+++||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 77 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK--SSSAVEDSRKEAVLLAKMK-HPNIVAFKESFEADGHLYIVM 77 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc--chHHHHHHHHHHHHHHhCC-CCCcceEEEEEEECCEEEEEE
Confidence 4888999999999999999999999999999985432 2234577889999999998 999999999999999999999
Q ss_pred eccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 148 DLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 148 e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
||+++++|.+++... ..+++..+..++.||+.||.|||++|++|+||||+||++ +.++.++|+|||.+.......
T Consensus 78 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili---~~~~~~~l~dfg~~~~~~~~~ 154 (255)
T cd08219 78 EYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFL---TQNGKVKLGDFGSARLLTSPG 154 (255)
T ss_pred eeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEE---CCCCcEEEcccCcceeecccc
Confidence 999999999988653 458999999999999999999999999999999999999 456779999999987664322
Q ss_pred -cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHH
Q 010013 226 -VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (520)
Q Consensus 226 -~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (520)
......|++.|+|||++.+ .++.++|+||||+++|+|++|..||...........+..+...... ..++..+.++
T Consensus 155 ~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l 231 (255)
T cd08219 155 AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPLP---SHYSYELRSL 231 (255)
T ss_pred cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCCCC---cccCHHHHHH
Confidence 2234568899999999864 4888999999999999999999999988877776666655443222 3578899999
Q ss_pred HHHhcccCCCCCCCHHHHHcC
Q 010013 304 VKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 304 i~~~l~~dp~~Rps~~~~l~~ 324 (520)
+.+||..||++|||+.++++-
T Consensus 232 i~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 232 IKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred HHHHHhCCcccCCCHHHHhhc
Confidence 999999999999999999874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-40 Score=313.96 Aligned_cols=253 Identities=26% Similarity=0.512 Sum_probs=213.8
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 147 (520)
+|.+.+.||+|+||.||+|.++.+|..+|+|.+..... .....+.+.+|+.++++++ ||||+++++.+......++|+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~ 78 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKM-PVKEKEASKKEVILLAKMK-HPNIVTFFASFQENGRLFIVM 78 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhc-cchhhHHHHHHHHHHHhCC-CCChhhhhheeccCCeEEEEE
Confidence 48889999999999999999999999999999865432 2234567889999999998 999999999999999999999
Q ss_pred eccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 148 DLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 148 e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
||+++++|.+++.... .+++..+..++.|++.||.|||+.+++|+||||+||+++. +...++|+|||.+.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~--~~~~~~l~d~~~~~~~~~~~ 156 (257)
T cd08225 79 EYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSK--NGMVAKLGDFGIARQLNDSM 156 (257)
T ss_pred ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcC--CCCeEEecccccchhccCCc
Confidence 9999999999887643 4799999999999999999999999999999999999953 23457999999988764332
Q ss_pred c-ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHH
Q 010013 226 V-FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (520)
Q Consensus 226 ~-~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (520)
. .....|++.|+|||.+.. .++.++|+||||++++++++|..||......+....+....... ..+.++..+.++
T Consensus 157 ~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 233 (257)
T cd08225 157 ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAP---ISPNFSRDLRSL 233 (257)
T ss_pred ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCCC---CCCCCCHHHHHH
Confidence 2 223468899999998764 58899999999999999999999998777666655555443322 124678899999
Q ss_pred HHHhcccCCCCCCCHHHHHcCCcc
Q 010013 304 VKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 304 i~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
+.+||..+|++|||+.++++||||
T Consensus 234 i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 234 ISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred HHHHhccChhhCcCHHHHhhCCCC
Confidence 999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=312.89 Aligned_cols=265 Identities=26% Similarity=0.428 Sum_probs=213.5
Q ss_pred CCcccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCC-C----CeeEE
Q 010013 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH-R----NIVEL 133 (520)
Q Consensus 59 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~h-p----~iv~l 133 (520)
......+..+|.+.+.+|+|.||.|..+.+..++..||||+++.-. ...+..+-|+++|.++..+ | -+|++
T Consensus 81 ~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~----kYreAa~iEi~vLqki~~~DP~g~~rcv~m 156 (415)
T KOG0671|consen 81 YQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD----KYREAALIEIEVLQKINESDPNGKFRCVQM 156 (415)
T ss_pred EEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH----HHhhHHHHHHHHHHHHHhcCCCCceEEEee
Confidence 3445667899999999999999999999999999999999986322 3446677899999999522 3 47889
Q ss_pred EEEEEeCCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCC------
Q 010013 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA------ 205 (520)
Q Consensus 134 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~------ 205 (520)
.++|+..++.|||+|.+ |-++.+.|..++ +++...+..+++||+.++++||+.+++|.||||+|||+.+..
T Consensus 157 ~~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~ 235 (415)
T KOG0671|consen 157 RDWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYN 235 (415)
T ss_pred ehhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEec
Confidence 99999999999999998 779999998765 588999999999999999999999999999999999997421
Q ss_pred -----------CCCCeeEeecccccccCCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCC
Q 010013 206 -----------EDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGET 273 (520)
Q Consensus 206 -----------~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~ 273 (520)
.+..|+|+|||.|...... .+..+.|..|.|||++-+ +|+..+||||+||||+||++|...|++..
T Consensus 236 ~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~--hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHe 313 (415)
T KOG0671|consen 236 PKKKVCFIRPLKSTAIKVIDFGSATFDHEH--HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHE 313 (415)
T ss_pred cCCccceeccCCCcceEEEecCCcceeccC--cceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCC
Confidence 2456999999999875433 366788999999998765 79999999999999999999999998877
Q ss_pred HHHHH---HHHHc------------------CCCCCCCCCCCC---------------------CCHHHHHHHHHhcccC
Q 010013 274 EQSIF---DAILR------------------GHIDFSSDPWPN---------------------ISSSAKDIVKKMLHAD 311 (520)
Q Consensus 274 ~~~~~---~~~~~------------------~~~~~~~~~~~~---------------------~~~~~~~li~~~l~~d 311 (520)
+.+.+ +.|.. +...++....+. .-..+.+||++||..|
T Consensus 314 n~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fD 393 (415)
T KOG0671|consen 314 NLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFD 393 (415)
T ss_pred cHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccC
Confidence 55533 22211 111111100000 1235779999999999
Q ss_pred CCCCCCHHHHHcCCccccC
Q 010013 312 PKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 312 p~~Rps~~~~l~~~~~~~~ 330 (520)
|.+|+|+.|+|.||||...
T Consensus 394 P~~RiTl~EAL~HpFF~~~ 412 (415)
T KOG0671|consen 394 PARRITLREALSHPFFARL 412 (415)
T ss_pred ccccccHHHHhcCHHhhcC
Confidence 9999999999999999854
|
|
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-40 Score=315.33 Aligned_cols=254 Identities=26% Similarity=0.454 Sum_probs=214.2
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
+-|.+.+.||+|+||.||+|.+..++..+|+|.+..... ....+.+.+|+.+++++. ||||+++++++..+...++|
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 80 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCD-SPYVTKYYGSYLKDTKLWII 80 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHHHhcC-CCCEeEEEEEEEeCCeEEEE
Confidence 457888999999999999999988899999998754322 234567889999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC-
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~- 225 (520)
|||+++++|.+++.. ..+++..+..++.|++.|+.+||+.|++|+||+|+||+++ .++.++|+|||++.......
T Consensus 81 ~e~~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~---~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06641 81 MEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQI 156 (277)
T ss_pred EEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEEC---CCCCEEEeecccceecccchh
Confidence 999999999988754 5689999999999999999999999999999999999994 56779999999987654322
Q ss_pred cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Q 010013 226 VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (520)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (520)
......++..|+|||.+.. .++.++|+|||||++|++++|..||...........+.....+. ....++..+.+++
T Consensus 157 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i 233 (277)
T cd06641 157 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPPT---LEGNYSKPLKEFV 233 (277)
T ss_pred hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCCCC---CCcccCHHHHHHH
Confidence 1233467889999998864 47889999999999999999999998776665555554432221 1235788999999
Q ss_pred HHhcccCCCCCCCHHHHHcCCccccC
Q 010013 305 KKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 305 ~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
.+||+.+|++||++.++++||||...
T Consensus 234 ~~~l~~~p~~Rp~~~~~l~~~~~~~~ 259 (277)
T cd06641 234 EACLNKEPSFRPTAKELLKHKFIVRF 259 (277)
T ss_pred HHHccCChhhCcCHHHHHhCHHHhhh
Confidence 99999999999999999999999864
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-40 Score=318.26 Aligned_cols=253 Identities=28% Similarity=0.496 Sum_probs=207.3
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 147 (520)
+|.+.+.||.|++|.||+|.+..+|..||+|.+..... ....+.+.+|+.+++++. ||||+++++++.+.+..++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 77 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE--EGTPSTAIREISLMKELK-HENIVRLHDVIHTENKLMLVF 77 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc--ccchHHHHHHHHHHHhhc-CCCEeeeeeeEeeCCcEEEEE
Confidence 48889999999999999999999999999999865432 223466778999999998 999999999999999999999
Q ss_pred eccCCCchHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 148 DLCAGGELFDRIIAK---GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 148 e~~~g~~L~~~l~~~---~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
||+++ +|.+++... ..+++..+..++.|++.||.|||+.|++||||||+||+++ +++.++|+|||++......
T Consensus 78 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~---~~~~~~l~d~g~~~~~~~~ 153 (284)
T cd07836 78 EYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLIN---KRGELKLADFGLARAFGIP 153 (284)
T ss_pred ecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEC---CCCcEEEeecchhhhhcCC
Confidence 99975 888877654 3589999999999999999999999999999999999994 5677999999998765322
Q ss_pred C-cccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCC-------------
Q 010013 225 D-VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDF------------- 288 (520)
Q Consensus 225 ~-~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~------------- 288 (520)
. ......+++.|++||.+.+ .++.++||||||+++|+|++|+.||.+....+....+.......
T Consensus 154 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07836 154 VNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPE 233 (284)
T ss_pred ccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCch
Confidence 1 2233457889999998754 36889999999999999999999998877655444433211000
Q ss_pred -----CC-------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 289 -----SS-------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 289 -----~~-------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
+. ...+.++..+.+++.+||+.||++||++.++++||||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 234 YKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred hcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 00 0012457889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-40 Score=321.84 Aligned_cols=256 Identities=27% Similarity=0.448 Sum_probs=203.0
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC----
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH---- 141 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~---- 141 (520)
-++|.+.+.||+|+||.||+|.+..+++.||+|.+..... .......+.+|+.+++++. ||||+++++++....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~ 88 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENE-KEGFPITALREIKILQLLK-HENVVNLIEICRTKATPYN 88 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCC-cCCchhHHHHHHHHHHhCC-CCCccceEEEEeccccccc
Confidence 3579999999999999999999999999999998864322 2222345678999999998 999999999886543
Q ss_pred ----eEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecc
Q 010013 142 ----SVNLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (520)
Q Consensus 142 ----~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg 216 (520)
..++||||+.+ +|.+.+.... .+++..+..++.||+.||.|||++|++|+||||+||++ +.++.+||+|||
T Consensus 89 ~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~---~~~~~~kl~dfg 164 (310)
T cd07865 89 RYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILI---TKDGILKLADFG 164 (310)
T ss_pred CCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE---CCCCcEEECcCC
Confidence 45999999964 7877776543 68999999999999999999999999999999999999 456789999999
Q ss_pred cccccCCCC-----cccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC
Q 010013 217 LSVFFKPGD-----VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289 (520)
Q Consensus 217 ~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~ 289 (520)
++....... ......++..|+|||.+.+ .++.++||||||+++|+|++|..||.+.........+......++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (310)
T cd07865 165 LARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSIT 244 (310)
T ss_pred CcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 998653322 1123457888999998754 368899999999999999999999988776544443332111111
Q ss_pred CCC----------------------------CCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 290 SDP----------------------------WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 290 ~~~----------------------------~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
... ....+..+.++|.+||..||.+|||++++|+||||
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 245 PEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred hhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 000 00125678899999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-40 Score=313.25 Aligned_cols=249 Identities=28% Similarity=0.487 Sum_probs=202.4
Q ss_pred ecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEecc
Q 010013 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLC 150 (520)
Q Consensus 71 ~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~ 150 (520)
....||+|+||.||+|.+..++..+|+|.+.... ....+.+.+|+.++++++ |+||+++++++..++..++|+||+
T Consensus 12 ~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~ 87 (268)
T cd06624 12 ERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD---SRYVQPLHEEIALHSYLK-HRNIVQYLGSDSENGFFKIFMEQV 87 (268)
T ss_pred ceEEEecCCceEEEEeEecCCCcEEEEEEecCCC---HHHHHHHHHHHHHHHhcC-CCCeeeeeeeeccCCEEEEEEecC
Confidence 3468999999999999999999999999875432 234567899999999998 999999999999999999999999
Q ss_pred CCCchHHHHHhc-CCC--CHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC-c
Q 010013 151 AGGELFDRIIAK-GHY--SERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD-V 226 (520)
Q Consensus 151 ~g~~L~~~l~~~-~~l--~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-~ 226 (520)
++++|.+.+... ..+ ++..+..++.||+.||.|||+.||+||||||+||+++. ..+.++|+|||.+....... .
T Consensus 88 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~--~~~~~~l~dfg~~~~~~~~~~~ 165 (268)
T cd06624 88 PGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNT--YSGVVKISDFGTSKRLAGINPC 165 (268)
T ss_pred CCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC--CCCeEEEecchhheecccCCCc
Confidence 999999988764 445 88889999999999999999999999999999999953 24579999999987654322 2
Q ss_pred ccccccCCCccCchhhcc---cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHH-HHHHHcCCCCCCCCCCCCCCHHHHH
Q 010013 227 FKDLVGSAYYVAPEVLRR---NYGAEADIWSAGVILYILLSGVPPFWGETEQSI-FDAILRGHIDFSSDPWPNISSSAKD 302 (520)
Q Consensus 227 ~~~~~gt~~y~aPE~~~~---~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (520)
.....|++.|+|||.+.+ .++.++||||||+++|+|++|..||........ ...... ..........++..+.+
T Consensus 166 ~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 243 (268)
T cd06624 166 TETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGM--FKIHPEIPESLSAEAKN 243 (268)
T ss_pred cccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhh--hccCCCCCcccCHHHHH
Confidence 233468899999998753 378899999999999999999999975432211 111110 01111112357889999
Q ss_pred HHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 303 IVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 303 li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
++.+||..+|++|||+.+++.||||
T Consensus 244 li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 244 FILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred HHHHHcCCCchhCCCHHHHHhCCCC
Confidence 9999999999999999999999997
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-40 Score=315.50 Aligned_cols=253 Identities=24% Similarity=0.393 Sum_probs=209.6
Q ss_pred ccceeecceeeccCCeEEEEEEEcC-----CCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKD-----TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~ 140 (520)
.+.|.+.+.||+|++|.||+|.+.. ++..+|+|.+.... .......+.+|+.++++++ |+||+++++++.+.
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~ 81 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC--SEQDESDFLMEALIMSKFN-HQNIVRLIGVSFER 81 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEccC
Confidence 3669999999999999999999987 67889999875322 2233456888999999998 99999999999988
Q ss_pred CeEEEEEeccCCCchHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEe
Q 010013 141 HSVNLIMDLCAGGELFDRIIAKG-------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKAT 213 (520)
Q Consensus 141 ~~~~lv~e~~~g~~L~~~l~~~~-------~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~ 213 (520)
+..++||||++|++|.+++...+ .+++..+..++.||+.||.|||++|++||||||+||+++..+....+||+
T Consensus 82 ~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 82 LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred CCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEec
Confidence 99999999999999999987653 48899999999999999999999999999999999999765555679999
Q ss_pred ecccccccCCCCcc---cccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCC
Q 010013 214 DFGLSVFFKPGDVF---KDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDF 288 (520)
Q Consensus 214 Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~ 288 (520)
|||+++........ .....+..|+|||++. +.++.++|||||||++|+|++ |..||.+.........+......
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~- 240 (277)
T cd05036 162 DFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGRL- 240 (277)
T ss_pred cCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC-
Confidence 99999876322211 1223356799999875 458999999999999999997 99999988877776665543221
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 289 SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 289 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
.....++..+.+++.+||+.+|++|||+.++++|
T Consensus 241 --~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 241 --DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred --CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 1124678999999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-40 Score=320.16 Aligned_cols=258 Identities=30% Similarity=0.548 Sum_probs=215.9
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
+..|.....||+|+||.||+|.+..+++.+|+|.+.... ....+.+.+|+.+++.+. ||||+++++++..++..++
T Consensus 20 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~-hp~i~~~~~~~~~~~~~~i 95 (297)
T cd06659 20 RSLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRK---QQRRELLFNEVVIMRDYQ-HQNVVEMYKSYLVGEELWV 95 (297)
T ss_pred hhhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecc---cchHHHHHHHHHHHHhCC-CCchhhhhhheeeCCeEEE
Confidence 344666678999999999999999889999999985432 233466889999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
||||+++++|.+.+.. ..+++..+..++.|++.||.|||+.|++||||||+||++ +.++.++|+|||++.......
T Consensus 96 v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill---~~~~~~kL~dfg~~~~~~~~~ 171 (297)
T cd06659 96 LMEFLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILL---TLDGRVKLSDFGFCAQISKDV 171 (297)
T ss_pred EEecCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEE---ccCCcEEEeechhHhhccccc
Confidence 9999999999886644 568999999999999999999999999999999999999 456789999999987654322
Q ss_pred -cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHH
Q 010013 226 -VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (520)
Q Consensus 226 -~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (520)
......|++.|+|||.+.+ .++.++|||||||++|+|++|+.||...........+...... ....+..++..+.++
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~ 250 (297)
T cd06659 172 PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPP-KLKNAHKISPVLRDF 250 (297)
T ss_pred ccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCC-CccccCCCCHHHHHH
Confidence 2234568999999999864 5889999999999999999999999887766665555443222 222335678899999
Q ss_pred HHHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 304 VKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 304 i~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
|.+||+.+|++||++.++++||||.....
T Consensus 251 i~~~l~~~P~~Rps~~~ll~~~~~~~~~~ 279 (297)
T cd06659 251 LERMLTREPQERATAQELLDHPFLLQTGL 279 (297)
T ss_pred HHHHhcCCcccCcCHHHHhhChhhccCCC
Confidence 99999999999999999999999986543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-39 Score=316.59 Aligned_cols=257 Identities=27% Similarity=0.469 Sum_probs=215.3
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
....|...+.||+|+||.||+|.+..++..+|+|.+.............+.+|+.+++++. |||++++++++..+...+
T Consensus 23 ~~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~ 101 (317)
T cd06635 23 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIK-HPNSIEYKGCYLREHTAW 101 (317)
T ss_pred chhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCC-CCCEEEEEEEEeeCCeEE
Confidence 3345888999999999999999999899999999987554444445567889999999998 999999999999999999
Q ss_pred EEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 145 LIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
+||||+.| +|.+.+.. ..++++..+..++.|++.||.|||++|++||||+|+||+++ .++.++|+|||++.....
T Consensus 102 lv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~---~~~~~kl~dfg~~~~~~~ 177 (317)
T cd06635 102 LVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLT---EPGQVKLADFGSASIASP 177 (317)
T ss_pred EEEeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEEC---CCCCEEEecCCCccccCC
Confidence 99999975 77776654 55689999999999999999999999999999999999994 567899999999876443
Q ss_pred CCcccccccCCCccCchhhc----ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHH
Q 010013 224 GDVFKDLVGSAYYVAPEVLR----RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (520)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~----~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (520)
. ....|++.|+|||.+. +.++.++|||||||++|+|++|..||...........+........ ....++..
T Consensus 178 ~---~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 252 (317)
T cd06635 178 A---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTL--QSNEWSDY 252 (317)
T ss_pred c---ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCC--CCccccHH
Confidence 2 3456889999999863 3578899999999999999999999988776665555554433221 12356789
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 300 AKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 300 ~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
+.+++.+||+.+|.+||++.++++|+|+....
T Consensus 253 l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 284 (317)
T cd06635 253 FRNFVDSCLQKIPQDRPTSEELLKHMFVLRER 284 (317)
T ss_pred HHHHHHHHccCCcccCcCHHHHHhChhhhccC
Confidence 99999999999999999999999999996543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-40 Score=318.24 Aligned_cols=253 Identities=30% Similarity=0.471 Sum_probs=207.5
Q ss_pred eeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 010013 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMD 148 (520)
Q Consensus 69 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e 148 (520)
|.+.+.||.|++|.||+|.++.+|..||+|++..... .....+.+.+|+.++++++ ||||+++++++.++...+++||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~-~~~iv~~~~~~~~~~~~~iv~e 78 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETE-DEGVPSTAIREISLLKELN-HPNIVRLLDVVHSENKLYLVFE 78 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccc-cccchhHHHHHHHHHHhcC-CCCccCHhheeccCCeEEEEEe
Confidence 5678999999999999999999999999999865432 2233456788999999998 9999999999999999999999
Q ss_pred ccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC-
Q 010013 149 LCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (520)
Q Consensus 149 ~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~- 225 (520)
|+. ++|.+++.... .+++..+..++.|++.||.|||+++++||||+|+||+++ .++.++|+|||++.......
T Consensus 79 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~---~~~~~~l~df~~~~~~~~~~~ 154 (283)
T cd07835 79 FLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLID---REGALKLADFGLARAFGVPVR 154 (283)
T ss_pred ccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEc---CCCcEEEeecccccccCCCcc
Confidence 995 68999887765 689999999999999999999999999999999999995 46789999999997653222
Q ss_pred cccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC-----------------
Q 010013 226 VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI----------------- 286 (520)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~----------------- 286 (520)
......+++.|+|||++.+ .++.++||||||+++|+|++|..||...........+.+...
T Consensus 155 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd07835 155 TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYK 234 (283)
T ss_pred ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhh
Confidence 2233456889999998754 368899999999999999999999987765443333222100
Q ss_pred --------CCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 287 --------DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 287 --------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
.......+.++..+.++|.+||+++|.+|||+.++++||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 235 PTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred hhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 00011134677899999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=314.93 Aligned_cols=257 Identities=28% Similarity=0.456 Sum_probs=207.7
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe--CCeEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED--RHSVN 144 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~--~~~~~ 144 (520)
++|...+.||.|++|.||+|.+..+++.+|+|.+.... .......+.+|+++++++. ||||+++++++.+ .+.++
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~~ 77 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDP--NPDLQKQILRELEINKSCK-SPYIVKYYGAFLDESSSSIG 77 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCC--chHHHHHHHHHHHHHHhCC-CCCeeeeeeEEEccCCCeEE
Confidence 35888999999999999999999999999999986432 2234567889999999998 9999999998865 34789
Q ss_pred EEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccc
Q 010013 145 LIMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~----~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 220 (520)
+||||++|++|.+++.. ...+++..+..++.||+.||.|||+.|++|+||+|+||+++ .++.++|+|||++..
T Consensus 78 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~---~~~~~~l~dfg~~~~ 154 (287)
T cd06621 78 IAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLT---RKGQVKLCDFGVSGE 154 (287)
T ss_pred EEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEe---cCCeEEEeecccccc
Confidence 99999999999887643 34589999999999999999999999999999999999994 466799999999876
Q ss_pred cCCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCC-----CHHHHHHHHHcCCCCC-CCCCC
Q 010013 221 FKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGE-----TEQSIFDAILRGHIDF-SSDPW 293 (520)
Q Consensus 221 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~-----~~~~~~~~~~~~~~~~-~~~~~ 293 (520)
..... .....++..|+|||.+.+ .++.++||||||+++|+|++|..||... ...+....+....... .....
T Consensus 155 ~~~~~-~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd06621 155 LVNSL-AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPG 233 (287)
T ss_pred ccccc-cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCC
Confidence 54322 123467889999998864 5889999999999999999999999765 2233444443322211 11111
Q ss_pred --CCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 294 --PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 294 --~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
...++.+.+++.+||..+|++|||+.|+++||||+..
T Consensus 234 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~ 272 (287)
T cd06621 234 NGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQ 272 (287)
T ss_pred CCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcccccc
Confidence 1346789999999999999999999999999999644
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=317.23 Aligned_cols=256 Identities=29% Similarity=0.494 Sum_probs=213.3
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.+.|...+.||+|+||.||+|.+..++..+++|.+...........+.+.+|+.+++.++ |||++++++++.+....++
T Consensus 20 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~l 98 (313)
T cd06633 20 EEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLK-HPNTIEYKGCYLKEHTAWL 98 (313)
T ss_pred HHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCC-CCCCccEEEEEEeCCEEEE
Confidence 345777788999999999999999999999999987554444444567889999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 146 IMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
||||+. +++.+.+.. ..++++..+..++.||+.||.|||++|++|+||+|+||++. .++.++|+|||++.....
T Consensus 99 v~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~---~~~~~kL~dfg~~~~~~~- 173 (313)
T cd06633 99 VMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLT---EPGQVKLADFGSASKSSP- 173 (313)
T ss_pred EEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEEC---CCCCEEEeecCCCcccCC-
Confidence 999996 477777654 45689999999999999999999999999999999999994 567799999999865322
Q ss_pred CcccccccCCCccCchhhc----ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHH
Q 010013 225 DVFKDLVGSAYYVAPEVLR----RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300 (520)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~----~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (520)
.....|+..|+|||.+. +.++.++|||||||++|+|++|..||...........+.....+ ....+.++..+
T Consensus 174 --~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l 249 (313)
T cd06633 174 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSP--TLQSNEWTDSF 249 (313)
T ss_pred --CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCC--CCCccccCHHH
Confidence 23457889999999873 45788999999999999999999999887665555554443222 11224567889
Q ss_pred HHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 301 ~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
++++.+||+.+|++||++.++++||||....
T Consensus 250 ~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~ 280 (313)
T cd06633 250 RGFVDYCLQKIPQERPASAELLRHDFVRRDR 280 (313)
T ss_pred HHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence 9999999999999999999999999998643
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-42 Score=297.10 Aligned_cols=250 Identities=25% Similarity=0.380 Sum_probs=205.2
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe-----C
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED-----R 140 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~-----~ 140 (520)
.++|++.+.||+|||+.||+++...++..||+|++.-. ..+..+...+|+..-++++ |||+++++++... .
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~---~~~~~e~~~rEid~~rkf~-s~~vl~l~dh~l~~~~D~~ 95 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCH---SQEDIEEALREIDNHRKFN-SPNVLRLVDHQLREEKDGK 95 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeecc---chHHHHHHHHHHHHHHhhC-CcchHHHHHHHHHhhccCc
Confidence 47899999999999999999999999999999998543 2456788999999999998 9999999887533 3
Q ss_pred CeEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcC--CeeecCCCCcEEeecCCCCCCeeEee
Q 010013 141 HSVNLIMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSMG--VMHRDLKPENFLFSSSAEDSPLKATD 214 (520)
Q Consensus 141 ~~~~lv~e~~~g~~L~~~l~~----~~~l~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~kl~D 214 (520)
+..|++++|...|+|.+.+.. +..+++..+..|+.+|++||.+||+.. ++||||||.|||++ +.+.++|+|
T Consensus 96 ~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls---~~~~~vl~D 172 (302)
T KOG2345|consen 96 HEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLS---DSGLPVLMD 172 (302)
T ss_pred eeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEec---CCCceEEEe
Confidence 459999999999999998854 236999999999999999999999998 99999999999995 467799999
Q ss_pred cccccccCCC----C------cccccccCCCccCchhhc----ccCCCcchhHHHHHHHHHHhhCCCCCCCCCH--HHHH
Q 010013 215 FGLSVFFKPG----D------VFKDLVGSAYYVAPEVLR----RNYGAEADIWSAGVILYILLSGVPPFWGETE--QSIF 278 (520)
Q Consensus 215 fg~a~~~~~~----~------~~~~~~gt~~y~aPE~~~----~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~--~~~~ 278 (520)
||.+....-. . .+....-|..|.|||.+. ...+.++|||||||+||.|+.|..||...-. ..+.
T Consensus 173 ~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSla 252 (302)
T KOG2345|consen 173 LGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLA 252 (302)
T ss_pred ccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEE
Confidence 9998765311 0 112234588899999985 2478899999999999999999999953221 1112
Q ss_pred HHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 279 DAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
-.+.++.+.++... .+|+.+.++|..||++||.+||++.+++.+
T Consensus 253 LAv~n~q~s~P~~~--~yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 253 LAVQNAQISIPNSS--RYSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred EeeeccccccCCCC--CccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 22345556666543 489999999999999999999999999864
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=327.29 Aligned_cols=253 Identities=23% Similarity=0.417 Sum_probs=214.4
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCc---E-EEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQ---Q-FACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~---~-~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~ 140 (520)
..++..+.++||+|+||.||+|..+..+. . ||+|............+..+.+|+++|++++ |||||++||+....
T Consensus 155 ~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~-H~NVVr~yGVa~~~ 233 (474)
T KOG0194|consen 155 SHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLN-HPNVVRFYGVAVLE 233 (474)
T ss_pred eccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCC-CCCEEEEEEEEcCC
Confidence 34556677999999999999999875422 3 8999887544456677889999999999998 99999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccc
Q 010013 141 HSVNLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (520)
Q Consensus 141 ~~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~ 219 (520)
..+++|||+|.||+|.++|.+.+ .++..+...++.+.+.||+|||+++++||||-..|+|++ .+..+||+|||+++
T Consensus 234 ~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~---~~~~vKISDFGLs~ 310 (474)
T KOG0194|consen 234 EPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYS---KKGVVKISDFGLSR 310 (474)
T ss_pred CccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheec---CCCeEEeCcccccc
Confidence 99999999999999999999887 499999999999999999999999999999999999994 45668999999988
Q ss_pred ccCCCCccc-ccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCC
Q 010013 220 FFKPGDVFK-DLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (520)
Q Consensus 220 ~~~~~~~~~-~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (520)
....-.... ...-...|+|||.+. +.++.++|||||||++||+++ |..||.+....+....+....+..+.+ ...
T Consensus 311 ~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~--~~~ 388 (474)
T KOG0194|consen 311 AGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIP--SKT 388 (474)
T ss_pred CCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCC--CCC
Confidence 753111111 112346799999987 459999999999999999999 899999999999999996555444432 366
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 297 SSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 297 ~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
|..+..++.+|+..+|++|||+.++.+
T Consensus 389 p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 389 PKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred HHHHHHHHHHhccCChhhccCHHHHHH
Confidence 889999999999999999999999865
|
|
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-40 Score=318.64 Aligned_cols=258 Identities=28% Similarity=0.507 Sum_probs=214.1
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.++|.+.+.||+|+||.||++....++..+|+|.+.... ....+.+.+|+.+++++. ||||+++++++...+..++
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~-hp~i~~~~~~~~~~~~~~l 93 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ---QPKKELIINEILVMRENK-HPNIVNYLDSYLVGDELWV 93 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc---chHHHHHHHHHHHHhhcC-CCCeeehhheeeeCCcEEE
Confidence 468999999999999999999998889999999985332 233467889999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
|+||+++++|.+++.+ ..+++..+..++.|++.||.|||++|++|+||+|+||+++ .++.++|+|||++.......
T Consensus 94 v~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~---~~~~~kL~dfg~~~~~~~~~ 169 (293)
T cd06647 94 VMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG---MDGSVKLTDFGFCAQITPEQ 169 (293)
T ss_pred EEecCCCCcHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEc---CCCCEEEccCcceecccccc
Confidence 9999999999998765 3688999999999999999999999999999999999994 56789999999887654332
Q ss_pred -cccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHH
Q 010013 226 -VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (520)
Q Consensus 226 -~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (520)
......|++.|+|||.+. +.++.++||||||+++|++++|..||...........+.....+ .......++..+.++
T Consensus 170 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l 248 (293)
T cd06647 170 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTP-ELQNPEKLSAIFRDF 248 (293)
T ss_pred cccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCC-CCCCccccCHHHHHH
Confidence 223346888999999875 45788999999999999999999999876654433333222111 111234568899999
Q ss_pred HHHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 304 VKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 304 i~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
+.+||..+|++||++.+++.|+||+....
T Consensus 249 i~~~l~~~p~~Rp~~~~il~h~~~~~~~~ 277 (293)
T cd06647 249 LNRCLEMDVEKRGSAKELLQHPFLKIAKP 277 (293)
T ss_pred HHHHccCChhhCcCHHHHhcCHHHhcCcc
Confidence 99999999999999999999999986553
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-40 Score=316.00 Aligned_cols=248 Identities=25% Similarity=0.448 Sum_probs=209.5
Q ss_pred cceeecceeeccCCeEEEEEEEcC-----CCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKD-----TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~ 141 (520)
++|.+.+.||+|+||.||+|.+.. ++..+|+|.+.... .....+.+.+|+++++++. ||||+++++++....
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~ 81 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA--SNDARKDFEREAELLTNFQ-HENIVKFYGVCTEGD 81 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC--CHHHHHHHHHHHHHHHhcC-CCCchheeeEEecCC
Confidence 568899999999999999998753 35789999986432 2224578899999999998 999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCC
Q 010013 142 SVNLIMDLCAGGELFDRIIAKG--------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAED 207 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~l~~~~--------------~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~ 207 (520)
..++||||+++++|.+++...+ .+++..+..++.|++.||.|||++|++||||||+||+++ .+
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~---~~ 158 (280)
T cd05049 82 PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVG---YD 158 (280)
T ss_pred CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEc---CC
Confidence 9999999999999999987542 378899999999999999999999999999999999994 56
Q ss_pred CCeeEeecccccccCCCCc---ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHH
Q 010013 208 SPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAIL 282 (520)
Q Consensus 208 ~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~ 282 (520)
+.++|+|||++........ .....+++.|+|||++. +.++.++|||||||++|+|++ |..||......+....+.
T Consensus 159 ~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~ 238 (280)
T cd05049 159 LVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECIT 238 (280)
T ss_pred CeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence 7899999999876533221 12334567899999886 458899999999999999998 999999888888777777
Q ss_pred cCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 283 RGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.+...... ..++..+.+++.+||..||++|||+.++++
T Consensus 239 ~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 239 QGRLLQRP---RTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred cCCcCCCC---CCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 65543322 467899999999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-40 Score=314.35 Aligned_cols=251 Identities=26% Similarity=0.498 Sum_probs=208.2
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
+.|.+.+.||+|++|.||+|.+..++..+|+|.+...........+.+.+|+.+++.+. ||||+++++++..++..+++
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN-HPNVIKYYASFIEDNELNIV 80 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHcc-CCchhhhhheeEeCCeEEEE
Confidence 46889999999999999999999899999999886544434445567889999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 147 MDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~----~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
|||+++++|.+++.. ...+++..+..++.||+.||.|||++|++|+||||+||+++ .++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~---~~~~~~l~dfg~~~~~~ 157 (267)
T cd08229 81 LELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFIT---ATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCCEEECcchhhhccc
Confidence 999999999988763 34689999999999999999999999999999999999994 56779999999987764
Q ss_pred CCC-cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCH--HHHHHHHHcCCCCCCCCCCCCCCH
Q 010013 223 PGD-VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETE--QSIFDAILRGHIDFSSDPWPNISS 298 (520)
Q Consensus 223 ~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 298 (520)
... ......|++.|+|||.+.+ .++.++||||||+++|+|++|..||.+... ......+.... .+......++.
T Consensus 158 ~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 235 (267)
T cd08229 158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD--YPPLPSDHYSE 235 (267)
T ss_pred cCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCC--CCCCCcccccH
Confidence 322 2234568899999998864 478899999999999999999999976543 23333333322 22223346788
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 299 SAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 299 ~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.+.+++.+||..+|++|||+.++++
T Consensus 236 ~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 236 ELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred HHHHHHHHhcCCCcccCCCHHHHHH
Confidence 9999999999999999999998865
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-40 Score=323.86 Aligned_cols=261 Identities=29% Similarity=0.463 Sum_probs=211.9
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC-
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH- 141 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~- 141 (520)
..+.++|.+.+.||+|+||.||+|.+..++..||+|++.... ......+.+.+|+.+++++. ||||+++++++....
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~ 88 (343)
T cd07880 11 WEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMK-HENVIGLLDVFTPDLS 88 (343)
T ss_pred hccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc-cchHHHHHHHHHHHHHHhcC-CCCccceeeeecCCcc
Confidence 446788999999999999999999999999999999885432 22333456889999999998 999999999987543
Q ss_pred -----eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecc
Q 010013 142 -----SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (520)
Q Consensus 142 -----~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg 216 (520)
.+++||||+ |++|.+++. ...+++..+..++.||+.||.|||+.||+||||||+||+++ .++.++|+|||
T Consensus 89 ~~~~~~~~lv~e~~-~~~l~~~~~-~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~---~~~~~kl~dfg 163 (343)
T cd07880 89 LDRFHDFYLVMPFM-GTDLGKLMK-HEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVN---EDCELKILDFG 163 (343)
T ss_pred ccccceEEEEEecC-CCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEeecc
Confidence 468999998 778877665 45799999999999999999999999999999999999994 56779999999
Q ss_pred cccccCCCCcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCC-------
Q 010013 217 LSVFFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID------- 287 (520)
Q Consensus 217 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~------- 287 (520)
++...... .....+++.|+|||.+.+ .++.++|+||||+++|++++|..||.+.........+......
T Consensus 164 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (343)
T cd07880 164 LARQTDSE--MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQ 241 (343)
T ss_pred cccccccC--ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 99865432 234567899999998864 4788999999999999999999999877654443333221110
Q ss_pred ----------------CC----CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 288 ----------------FS----SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 288 ----------------~~----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
+. ...++.++..+.++|.+||+.||++|||+.++++||||+....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~ 306 (343)
T cd07880 242 KLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHD 306 (343)
T ss_pred hhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcC
Confidence 00 0112467888999999999999999999999999999986543
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-40 Score=322.74 Aligned_cols=264 Identities=30% Similarity=0.436 Sum_probs=212.9
Q ss_pred cccceee-cceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcc-----------cHHHHHHHHHHHHhccCCCCeeE
Q 010013 65 VRNTYIF-GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRD-----------DVEDVRREVQIMHHLTGHRNIVE 132 (520)
Q Consensus 65 ~~~~y~~-~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~-----------~~~~~~~e~~~l~~l~~hp~iv~ 132 (520)
+.++|.. .+.||+|+||.||+|.++.+++.||+|++......... ....+.+|+.+++++. ||||++
T Consensus 6 ~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~ 84 (335)
T PTZ00024 6 ISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIK-HENIMG 84 (335)
T ss_pred cccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCC-Ccceee
Confidence 4567864 57799999999999999999999999998654322100 1124678999999998 999999
Q ss_pred EEEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeE
Q 010013 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKA 212 (520)
Q Consensus 133 l~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl 212 (520)
+++++..++..++||||+. ++|.+++.....+++..+..++.|++.||.|||+.|++|+||+|+||+++ .++.++|
T Consensus 85 ~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~---~~~~~kl 160 (335)
T PTZ00024 85 LVDVYVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFIN---SKGICKI 160 (335)
T ss_pred eeEEEecCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEEC---CCCCEEE
Confidence 9999999999999999996 58999998888899999999999999999999999999999999999994 5678999
Q ss_pred eecccccccCCC---------------CcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHH
Q 010013 213 TDFGLSVFFKPG---------------DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQ 275 (520)
Q Consensus 213 ~Dfg~a~~~~~~---------------~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~ 275 (520)
+|||.+...... .......+++.|+|||.+.+ .++.++|||||||++|+|++|..||.+....
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~ 240 (335)
T PTZ00024 161 ADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEI 240 (335)
T ss_pred CCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 999998765411 11123356788999998854 3688999999999999999999999888776
Q ss_pred HHHHHHHcCCCCCCCC------------------------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 276 SIFDAILRGHIDFSSD------------------------PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 276 ~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
+.+..+.......... ..+..+..+.++|.+||..+|++|||++++|.||||+...
T Consensus 241 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~ 320 (335)
T PTZ00024 241 DQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDP 320 (335)
T ss_pred HHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCCC
Confidence 6555443311100000 1134578899999999999999999999999999998664
Q ss_pred CC
Q 010013 332 DA 333 (520)
Q Consensus 332 ~~ 333 (520)
..
T Consensus 321 ~~ 322 (335)
T PTZ00024 321 LP 322 (335)
T ss_pred CC
Confidence 43
|
|
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-40 Score=326.27 Aligned_cols=264 Identities=28% Similarity=0.454 Sum_probs=212.6
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEE----eC
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE----DR 140 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~----~~ 140 (520)
+.++|.+.+.||+|+||.||+|.++.+|+.||+|++.... ......+.+.+|+.+++++. ||||+++++++. ..
T Consensus 3 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~-~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~ 80 (334)
T cd07855 3 VGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAF-DVPTLAKRTLRELKILRHFK-HDNIIAIRDILRPPGADF 80 (334)
T ss_pred hhhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEecccc-ccccchHHHHHHHHHHHhcC-CCCccCHHHhccccCCCC
Confidence 3477999999999999999999999999999999986532 22334567888999999998 999999998875 34
Q ss_pred CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccc
Q 010013 141 HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (520)
Q Consensus 141 ~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 220 (520)
..+++||||+. ++|.+.+...+.+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||++..
T Consensus 81 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~---~~~~~kl~dfg~~~~ 156 (334)
T cd07855 81 KDVYVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVN---EDCELRIGDFGMARG 156 (334)
T ss_pred ceEEEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCcEEeccccccee
Confidence 57899999995 58999888778899999999999999999999999999999999999994 577899999999876
Q ss_pred cCCCC-----cccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC---------
Q 010013 221 FKPGD-----VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG--------- 284 (520)
Q Consensus 221 ~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~--------- 284 (520)
..... ......|+..|+|||.+.+ .++.++|||||||++|+|++|+.||.+.........+...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~ 236 (334)
T cd07855 157 LSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVL 236 (334)
T ss_pred ecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhh
Confidence 53221 1123478899999998753 4789999999999999999999999776543322221110
Q ss_pred --------------CCCCCCC----CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCCCC
Q 010013 285 --------------HIDFSSD----PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDAS 334 (520)
Q Consensus 285 --------------~~~~~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~~~ 334 (520)
....... .++.++..+.++|.+||+.+|++|||+.+++.||||.......
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~~ 304 (334)
T cd07855 237 NRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDPD 304 (334)
T ss_pred hhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCCc
Confidence 0000011 1245789999999999999999999999999999997654443
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-40 Score=316.09 Aligned_cols=253 Identities=30% Similarity=0.497 Sum_probs=209.4
Q ss_pred eeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--CeEEEE
Q 010013 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--HSVNLI 146 (520)
Q Consensus 69 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~--~~~~lv 146 (520)
|.+.+.||+|++|.||+|.+..+++.+|+|.+.... ........+.+|+.+++++. |||++++++++... +..++|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~lv 78 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKLR-HPNIVRLKEIVTSKGKGSIYMV 78 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhcc-CCCeeeheeeEecCCCCcEEEE
Confidence 678899999999999999999999999999997643 23334466889999999998 99999999999888 899999
Q ss_pred EeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 147 MDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
|||+++ +|.+.+... ..+++..+..++.||+.||.|||+.|++|+||+|+||++ ++++.++|+|||++.......
T Consensus 79 ~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~---~~~~~~~l~d~g~~~~~~~~~ 154 (287)
T cd07840 79 FEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILI---NNDGVLKLADFGLARPYTKRN 154 (287)
T ss_pred eccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEE---cCCCCEEEccccceeeccCCC
Confidence 999975 888888665 579999999999999999999999999999999999999 457789999999998765432
Q ss_pred --cccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCC---------
Q 010013 226 --VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP--------- 292 (520)
Q Consensus 226 --~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--------- 292 (520)
......++..|+|||.+.+ .++.++||||||+++|+|++|+.||...........+...........
T Consensus 155 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07840 155 SADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPW 234 (287)
T ss_pred cccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchh
Confidence 2233456888999997653 478899999999999999999999988776655555443211111110
Q ss_pred -----------------CCC-CCHHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 293 -----------------WPN-ISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 293 -----------------~~~-~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
+.. ++..+.+++.+||..+|++|||+.++++||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 235 FENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred hhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 112 37889999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-39 Score=308.90 Aligned_cols=254 Identities=28% Similarity=0.483 Sum_probs=210.9
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccc--cCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--Ce
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRK--LINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--HS 142 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~--~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~--~~ 142 (520)
..|.+.+.||+|+||.||+|.+..++..+|+|.+.... .........+.+|+.+++++. ||||+++++++.+. ..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~-h~~i~~~~~~~~~~~~~~ 80 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLR-HDRIVQYYGCLRDPEEKK 80 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcC-CCCcceEEEEEEcCCCCE
Confidence 46999999999999999999999999999999875321 122344567899999999998 99999999998764 56
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
+++++||+++++|.+++...+.+++..+..++.|++.||.|||+.|++|+||||+||+++ .++.++|+|||++....
T Consensus 81 ~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~---~~~~~~l~dfg~~~~~~ 157 (264)
T cd06653 81 LSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRD---SAGNVKLGDFGASKRIQ 157 (264)
T ss_pred EEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc---CCCCEEECccccccccc
Confidence 889999999999999998877899999999999999999999999999999999999994 56779999999998653
Q ss_pred CC----CcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 010013 223 PG----DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (520)
Q Consensus 223 ~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (520)
.. .......|+..|+|||.+.+ .++.++|+|||||++|+|++|+.||...........+..... .......++
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~p~~~~ 235 (264)
T cd06653 158 TICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPT--KPMLPDGVS 235 (264)
T ss_pred cccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCC--CCCCCcccC
Confidence 21 11233568899999998865 478899999999999999999999987765554444432221 122235678
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 298 ~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
..+.+++.+||. +|..|||+.++++|||.
T Consensus 236 ~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 236 DACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred HHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 999999999999 57999999999999984
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=307.19 Aligned_cols=252 Identities=31% Similarity=0.540 Sum_probs=216.4
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 147 (520)
+|.+.+.||+|++|.||++.+..+++.+++|.+..... .....+.+.+|+++++++. |||++++++++.+....+++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~ 78 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKI-KEEALKSIMQEIDLLKNLK-HPNIVKYIGSIETSDSLYIIL 78 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHHhCC-CCCccEEEEEEEeCCEEEEEE
Confidence 48889999999999999999998899999999876543 2345678999999999998 999999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCc-
Q 010013 148 DLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV- 226 (520)
Q Consensus 148 e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~- 226 (520)
||+++++|.+++.....+++..+..++.|++.||.+||+.|++||||+|+||+++ .++.++|+|||.+........
T Consensus 79 e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~---~~~~~~l~d~~~~~~~~~~~~~ 155 (254)
T cd06627 79 EYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTT---KDGVVKLADFGVATKLNDVSKD 155 (254)
T ss_pred ecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEC---CCCCEEEeccccceecCCCccc
Confidence 9999999999998888899999999999999999999999999999999999995 467899999999987654332
Q ss_pred ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHH
Q 010013 227 FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305 (520)
Q Consensus 227 ~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 305 (520)
.....++..|+|||.+.+ .++.++||||+|+++|+|++|..||.................. ...+.++..+.+++.
T Consensus 156 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~ 232 (254)
T cd06627 156 DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHP---PLPEGISPELKDFLM 232 (254)
T ss_pred ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCCC---CCCCCCCHHHHHHHH
Confidence 234568889999998764 4788999999999999999999999877655444444332221 122467899999999
Q ss_pred HhcccCCCCCCCHHHHHcCCcc
Q 010013 306 KMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 306 ~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
+||..+|++|||+.++++||||
T Consensus 233 ~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 233 QCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred HHHhCChhhCcCHHHHhcCCCC
Confidence 9999999999999999999997
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=315.02 Aligned_cols=255 Identities=27% Similarity=0.447 Sum_probs=202.0
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.+.|.+.+.||+|+||.||+|.++.++..+|+|.+..... ......+.+|+.+++.+. |+||+++++++..+...++
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~l 80 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE--EGVPFTAIREASLLKGLK-HANIVLLHDIIHTKETLTF 80 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc--CCCcHHHHHHHHHHHhcC-CCCEeEEEEEEecCCeEEE
Confidence 3679999999999999999999999999999999865432 122345678999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 146 IMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
||||+. ++|.+.+.. ...+++..+..++.|++.||.|||+.||+|+||||+||+++ .++.++|+|||++......
T Consensus 81 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~---~~~~~~l~Dfg~~~~~~~~ 156 (291)
T cd07870 81 VFEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLIS---YLGELKLADFGLARAKSIP 156 (291)
T ss_pred EEeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEc---CCCcEEEeccccccccCCC
Confidence 999995 677776654 35688889999999999999999999999999999999994 5677999999998764322
Q ss_pred -CcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHH-HHHHHHHcCC--------------C
Q 010013 225 -DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQ-SIFDAILRGH--------------I 286 (520)
Q Consensus 225 -~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~-~~~~~~~~~~--------------~ 286 (520)
.......+++.|+|||.+.+ .++.++||||||+++|+|++|..||...... +....+.... .
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (291)
T cd07870 157 SQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLP 236 (291)
T ss_pred CCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcc
Confidence 12234467889999998854 4788999999999999999999999765532 1111111000 0
Q ss_pred CCCC------------CCCC--CCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 287 DFSS------------DPWP--NISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 287 ~~~~------------~~~~--~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
.+.. ..+. ..+..+.+++.+||..||.+|||+.+++.||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 237 NYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred cccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 0000 0001 125789999999999999999999999999997
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=308.66 Aligned_cols=252 Identities=31% Similarity=0.581 Sum_probs=217.4
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 147 (520)
+|.+.+.||.|+||.||++.+..++..+|+|++..... .....+.+.+|+++++.++ |||++++.+.+......++|+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~~~lv~ 78 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM-SEKEREDALNEVKILKKLN-HPNIIKYYESFEEKGKLCIVM 78 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccC-ChHHHHHHHHHHHHHHhcC-CCChhheEEEEecCCEEEEEE
Confidence 48889999999999999999998899999999865432 2345567889999999998 999999999999999999999
Q ss_pred eccCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 148 DLCAGGELFDRIIAK----GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 148 e~~~g~~L~~~l~~~----~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
||+++++|.+.+.+. ..+++..+..++.+++.||.+||+.|++|+||+|+||+++ .++.++|+|||.+.....
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~---~~~~~~l~d~~~~~~~~~ 155 (258)
T cd08215 79 EYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLT---SNGLVKLGDFGISKVLSS 155 (258)
T ss_pred EecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEc---CCCcEEECCccceeeccc
Confidence 999999999988764 6799999999999999999999999999999999999994 567899999999987644
Q ss_pred CC-cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHH
Q 010013 224 GD-VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (520)
Q Consensus 224 ~~-~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (520)
.. ......|++.|+|||.+.+ .++.++|+||+|+++++|++|..||.................... ...++..+.
T Consensus 156 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 232 (258)
T cd08215 156 TVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPI---PSQYSSELR 232 (258)
T ss_pred CcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCCC---CCCCCHHHH
Confidence 32 2234568899999998754 478899999999999999999999988877776666655433221 236789999
Q ss_pred HHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 302 DIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 302 ~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
+++.+||..+|++|||+.++|+||||
T Consensus 233 ~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 233 NLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred HHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 99999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=308.73 Aligned_cols=245 Identities=25% Similarity=0.460 Sum_probs=206.4
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+.+.||+|+||.||++.++. +..+|+|.+.... ...+.+.+|+.+++++. ||||+++++++......++|
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~~----~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~iv 77 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRA-QIKVAIKAINEGA----MSEEDFIEEAKVMMKLS-HPKLVQLYGVCTQQKPLYIV 77 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEecc-CceEEEEecccCC----ccHHHHHHHHHHHHHCC-CCCceeEEEEEccCCCEEEE
Confidence 468889999999999999998865 4679999875432 22357888999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 147 MDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
|||+++++|.+++... +.+++..+..++.|++.||.|||++|++|+||||+||+++ .++.+||+|||.+.......
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~---~~~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05114 78 TEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVS---STGVVKVSDFGMTRYVLDDE 154 (256)
T ss_pred EEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEc---CCCeEEECCCCCccccCCCc
Confidence 9999999999988753 4689999999999999999999999999999999999994 56779999999988654322
Q ss_pred cc--cccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHH
Q 010013 226 VF--KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (520)
Q Consensus 226 ~~--~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (520)
.. ....++..|+|||.+.+ .++.++||||||+++|+|++ |+.||......+....+..+...... ...+..+.
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~ 231 (256)
T cd05114 155 YTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRP---KLASMTVY 231 (256)
T ss_pred eeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCC---CCCCHHHH
Confidence 21 12234567999998864 58899999999999999999 99999988888888877765443222 34578899
Q ss_pred HHHHHhcccCCCCCCCHHHHHc
Q 010013 302 DIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 302 ~li~~~l~~dp~~Rps~~~~l~ 323 (520)
+++.+||..+|++|||+.++++
T Consensus 232 ~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 232 EVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred HHHHHHccCCcccCcCHHHHHH
Confidence 9999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-40 Score=317.10 Aligned_cols=249 Identities=24% Similarity=0.347 Sum_probs=203.9
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCc--EEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQ--QFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~--~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
++|.+.+.||+|+||.||+|..+.++. .+++|.+.. .......+.+.+|+.++.++..||||+++++++.....++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~--~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 79 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKE--FASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY 79 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccc--cCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence 468999999999999999999887664 467887652 1223345678899999999966999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCC
Q 010013 145 LIMDLCAGGELFDRIIAKG----------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDS 208 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~----------------~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~ 208 (520)
+||||+++++|.+++.... .+++..+..++.||+.||.|||++|++||||||+|||++ .+.
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~---~~~ 156 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVG---ENL 156 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEEC---CCC
Confidence 9999999999999986532 478899999999999999999999999999999999994 567
Q ss_pred CeeEeecccccccCCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCC
Q 010013 209 PLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHI 286 (520)
Q Consensus 209 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~ 286 (520)
.+||+|||++..............+..|+|||.+.+ .++.++|||||||++|+|++ |..||...........+..+..
T Consensus 157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~ 236 (297)
T cd05089 157 ASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 236 (297)
T ss_pred eEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCC
Confidence 799999999865322111111223457999998764 58899999999999999997 9999998888777776655422
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 287 DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 287 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
. .....++..+.+++.+||..+|.+|||++++++
T Consensus 237 ~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 270 (297)
T cd05089 237 M---EKPRNCDDEVYELMRQCWRDRPYERPPFAQISV 270 (297)
T ss_pred C---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 1 122467899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=314.67 Aligned_cols=247 Identities=23% Similarity=0.426 Sum_probs=207.4
Q ss_pred cceeecceeeccCCeEEEEEEEc-----CCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHK-----DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~ 141 (520)
..|.+.+.||+|+||.||++... .++..+|+|.+... .....+.+.+|+.+++++. ||||+++++++...+
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~---~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~ 80 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNLQ-HEHIVKFYGVCVEGD 80 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc---CHHHHHHHHHHHHHHHhCC-CCCcceEEEEEecCC
Confidence 56899999999999999999863 34567899987532 2334567899999999998 999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCC
Q 010013 142 SVNLIMDLCAGGELFDRIIAKG-------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDS 208 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~l~~~~-------------~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~ 208 (520)
.+++||||+++++|.+++...+ .+++..+..++.|++.||.|||++|++||||||+||+++ .++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~---~~~ 157 (288)
T cd05093 81 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVG---ENL 157 (288)
T ss_pred ccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEc---cCC
Confidence 9999999999999999887543 389999999999999999999999999999999999994 567
Q ss_pred CeeEeecccccccCCCCc---ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHc
Q 010013 209 PLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILR 283 (520)
Q Consensus 209 ~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~ 283 (520)
.++|+|||++........ .....+++.|+|||.+.+ .++.++|||||||++|+|++ |..||...........+..
T Consensus 158 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~ 237 (288)
T cd05093 158 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ 237 (288)
T ss_pred cEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence 899999999986533221 122345678999998864 58899999999999999998 9999988888777777776
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 284 GHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
+..... ...++..+.+++.+||+.+|.+|||+.+++.
T Consensus 238 ~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 238 GRVLQR---PRTCPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred CCcCCC---CCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 653322 1357889999999999999999999999854
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-40 Score=324.47 Aligned_cols=259 Identities=31% Similarity=0.494 Sum_probs=208.1
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC----
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR---- 140 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~---- 140 (520)
+..+|.+.+.||.|+||.||+|.++.+++.||+|.+..... ...+.+.+|+.++++++ ||||+++++++...
T Consensus 3 ~~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~---~~~~~~~~Ei~~l~~l~-h~~i~~~~~~~~~~~~~~ 78 (342)
T cd07854 3 LGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP---QSVKHALREIKIIRRLD-HDNIVKVYEVLGPSGSDL 78 (342)
T ss_pred cCcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC---chHHHHHHHHHHHHhcC-CCcchhhHhhhccccccc
Confidence 45789999999999999999999999999999999864432 44567889999999997 99999999876543
Q ss_pred ----------CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCe
Q 010013 141 ----------HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPL 210 (520)
Q Consensus 141 ----------~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~ 210 (520)
...++||||+. ++|.+.+.. +.+++..+..++.||+.||.|||+.|++||||||+||+++. .+..+
T Consensus 79 ~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~--~~~~~ 154 (342)
T cd07854 79 TEDVGSLTELNSVYIVQEYME-TDLANVLEQ-GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINT--EDLVL 154 (342)
T ss_pred ccccccccccceEEEEeeccc-ccHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcC--CCceE
Confidence 35789999996 588877653 57999999999999999999999999999999999999953 45578
Q ss_pred eEeecccccccCCCC----cccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC
Q 010013 211 KATDFGLSVFFKPGD----VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG 284 (520)
Q Consensus 211 kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~ 284 (520)
+|+|||.+....... ......++..|+|||.+.+ .++.++|||||||++|+|++|..||...........+...
T Consensus 155 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~ 234 (342)
T cd07854 155 KIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILES 234 (342)
T ss_pred EECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 999999987653221 1123357889999998643 4788999999999999999999999877655444433221
Q ss_pred CCC----------------------CC----CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 285 HID----------------------FS----SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 285 ~~~----------------------~~----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
... .. ....+.++.++.++|.+||..||++|||+.++|+||||+...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~~ 307 (342)
T cd07854 235 VPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCYS 307 (342)
T ss_pred cCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCcccccc
Confidence 100 00 001235788999999999999999999999999999998543
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-39 Score=307.65 Aligned_cols=253 Identities=33% Similarity=0.557 Sum_probs=214.4
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--CeEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--HSVNL 145 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~--~~~~l 145 (520)
+|++.+.||+|++|.||+|.+..+++.+++|++..... .....+.+.+|+.+++++. ||||+++++.+... ..+++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~l 78 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGD-SEEELEALEREIRILSSLQ-HPNIVRYYGSERDEEKNTLNI 78 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeecccc-chHHHHHHHHHHHHHHHcC-CCCEeeEEEEEecCCCCeEEE
Confidence 47888999999999999999998999999999865432 2345678999999999998 99999999999988 89999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
++||+++++|.+++.+...+++..+..++.|++.||.|||+.|++|+||+|+||+++ .++.++|+|||.+.......
T Consensus 79 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~---~~~~~~l~d~~~~~~~~~~~ 155 (260)
T cd06606 79 FLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVD---SDGVVKLADFGCAKRLGDIE 155 (260)
T ss_pred EEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEc---CCCCEEEcccccEEeccccc
Confidence 999999999999998888999999999999999999999999999999999999995 46789999999998876544
Q ss_pred c---ccccccCCCccCchhhccc-CCCcchhHHHHHHHHHHhhCCCCCCCCC-HHHHHHHHHcCCCCCCCCCCCCCCHHH
Q 010013 226 V---FKDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGET-EQSIFDAILRGHIDFSSDPWPNISSSA 300 (520)
Q Consensus 226 ~---~~~~~gt~~y~aPE~~~~~-~~~~~Dv~slG~~l~~ll~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (520)
. .....++..|+|||.+.+. .+.++||||||+++++|++|..||.... .......+.... ........++..+
T Consensus 156 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l 233 (260)
T cd06606 156 TGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSG--EPPEIPEHLSEEA 233 (260)
T ss_pred ccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccC--CCcCCCcccCHHH
Confidence 2 3445788999999988654 8899999999999999999999998765 222222222111 1111224568999
Q ss_pred HHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 301 KDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 301 ~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
.+++.+||..+|++||++.++++||||
T Consensus 234 ~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 234 KDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred HHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 999999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=310.12 Aligned_cols=246 Identities=22% Similarity=0.393 Sum_probs=208.2
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
..|.+.+.||+|+||.||+|.++.+++.+|+|.+... ....+.+.+|+.+++++. ||||+++++++..+..+++|
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~----~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 80 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYII 80 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC----chHHHHHHHHHHHHHhCC-CCChhheEEEEcCCCCcEEE
Confidence 4588899999999999999999999999999988643 223567889999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 147 MDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
|||+++++|.+++... ..+++..+..++.|++.||.|||++|++||||||+||++ ++++.+||+|||++......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~---~~~~~~kl~df~~~~~~~~~ 157 (263)
T cd05052 81 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLMTGD 157 (263)
T ss_pred EEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEE---cCCCcEEeCCCccccccccc
Confidence 9999999999988654 358999999999999999999999999999999999999 45678999999999876433
Q ss_pred Cccc--ccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHH
Q 010013 225 DVFK--DLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300 (520)
Q Consensus 225 ~~~~--~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (520)
.... ...++..|+|||.+.+ .++.++|||||||++|+|++ |..||.+....+....+...... .....++..+
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 234 (263)
T cd05052 158 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRM---ERPEGCPPKV 234 (263)
T ss_pred eeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCC---CCCCCCCHHH
Confidence 2111 1233567999998764 58889999999999999998 99999888877777766654221 2224678999
Q ss_pred HHHHHHhcccCCCCCCCHHHHHc
Q 010013 301 KDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 301 ~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.+++.+||..+|++|||+.++++
T Consensus 235 ~~li~~cl~~~p~~Rp~~~~l~~ 257 (263)
T cd05052 235 YELMRACWQWNPSDRPSFAEIHQ 257 (263)
T ss_pred HHHHHHHccCCcccCCCHHHHHH
Confidence 99999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=313.09 Aligned_cols=251 Identities=22% Similarity=0.377 Sum_probs=206.6
Q ss_pred cccceeecceeeccCCeEEEEEEEcC-----CCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKD-----TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~ 139 (520)
..++|++.+.||+|+||.||+|.++. ++..+|+|++.... .......+.+|+.+++.++ ||||+++++++..
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l~-~~~iv~~~~~~~~ 80 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFN-CHHVVRLLGVVSQ 80 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCC-CCCeeeEEEEEcC
Confidence 45779999999999999999998753 35679999875422 2223456889999999998 9999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCC
Q 010013 140 RHSVNLIMDLCAGGELFDRIIAKG----------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP 209 (520)
Q Consensus 140 ~~~~~lv~e~~~g~~L~~~l~~~~----------~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~ 209 (520)
....++||||+++++|.+++.+.. .+++..+..++.|++.||.|||+.|++|+||||+||+++ .++.
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~---~~~~ 157 (277)
T cd05062 81 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFT 157 (277)
T ss_pred CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEc---CCCC
Confidence 999999999999999999886532 357788999999999999999999999999999999994 5678
Q ss_pred eeEeecccccccCCCCcc---cccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcC
Q 010013 210 LKATDFGLSVFFKPGDVF---KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRG 284 (520)
Q Consensus 210 ~kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~ 284 (520)
++|+|||++......... ....+++.|+|||.+.+ .++.++|||||||++|+|++ |..||.+.........+...
T Consensus 158 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~ 237 (277)
T cd05062 158 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEG 237 (277)
T ss_pred EEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence 999999998765432211 12345678999998864 58999999999999999999 78999888877777766655
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 285 HIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
..... ...++..+.+++.+||+.+|++|||+.+++++
T Consensus 238 ~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 238 GLLDK---PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred CcCCC---CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 43222 24578899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-40 Score=309.27 Aligned_cols=245 Identities=37% Similarity=0.711 Sum_probs=214.3
Q ss_pred eeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCCCc
Q 010013 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGE 154 (520)
Q Consensus 75 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~g~~ 154 (520)
||+|+||.||++.+..+++.+|+|.+...........+.+..|+.+++++. ||||+++++.+..+...++||||+++++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 79 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRIN-HPFIVKLHYAFQTEEKLYLVLEYAPGGE 79 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcC-CCcHHHHHHHeecCCeeEEEEecCCCCc
Confidence 699999999999999889999999987665544445678899999999998 9999999999999999999999999999
Q ss_pred hHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC-CcccccccC
Q 010013 155 LFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG-DVFKDLVGS 233 (520)
Q Consensus 155 L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt 233 (520)
|.+++.....+++..+..++.|++.||.|||+.+++|+||+|+||+++ .++.++|+|||.+...... .......++
T Consensus 80 L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~---~~~~~~l~d~~~~~~~~~~~~~~~~~~~~ 156 (250)
T cd05123 80 LFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLD---ADGHIKLTDFGLAKELSSEGSRTNTFCGT 156 (250)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEc---CCCcEEEeecCcceecccCCCcccCCcCC
Confidence 999998888899999999999999999999999999999999999994 4667999999998876443 233445688
Q ss_pred CCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCC
Q 010013 234 AYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312 (520)
Q Consensus 234 ~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp 312 (520)
..|+|||...+ ..+.++|+||||+++|++++|..||...........+......++ ..++..+.+++.+||..||
T Consensus 157 ~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~i~~~l~~~p 232 (250)
T cd05123 157 PEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFP----EFLSPEARDLISGLLQKDP 232 (250)
T ss_pred ccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHHHHHHHhcCCH
Confidence 89999998864 478899999999999999999999988877666666665443333 3458899999999999999
Q ss_pred CCCCCH---HHHHcCCcc
Q 010013 313 KERLSA---AEVLNHPWM 327 (520)
Q Consensus 313 ~~Rps~---~~~l~~~~~ 327 (520)
++|||+ .++++||||
T Consensus 233 ~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 233 TKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred hhCCCcccHHHHHhCCCC
Confidence 999999 999999998
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-39 Score=305.84 Aligned_cols=251 Identities=31% Similarity=0.547 Sum_probs=212.8
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 147 (520)
+|.+.+.||+|++|.||++.+..++..+++|++..... ...+.+.+|+.+++++. ||||+++++++......++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~l~~ 76 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKCK-HPNIVKYYGSYLKKDELWIVM 76 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhCC-CCCEeEEEEEEecCCeEEEEE
Confidence 47888999999999999999998899999999865432 35578899999999999 999999999999999999999
Q ss_pred eccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCc
Q 010013 148 DLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226 (520)
Q Consensus 148 e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 226 (520)
||++|++|.+++... ..+++..+..++.|++.||.+||+.|++||||+|+||+++ .++.++|+|||.+........
T Consensus 77 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~---~~~~~~l~d~~~~~~~~~~~~ 153 (253)
T cd05122 77 EFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLT---SDGEVKLIDFGLSAQLSDTKA 153 (253)
T ss_pred ecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEc---cCCeEEEeecccccccccccc
Confidence 999999999988776 5799999999999999999999999999999999999994 467799999999987765432
Q ss_pred ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHH
Q 010013 227 FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305 (520)
Q Consensus 227 ~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 305 (520)
.....++..|+|||.+.+ .++.++||||||+++|++++|..||..................... ....++..+.++|.
T Consensus 154 ~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~ 232 (253)
T cd05122 154 RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLR-NPEKWSDEFKDFLK 232 (253)
T ss_pred ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCcC-cccccCHHHHHHHH
Confidence 345578899999998864 4788999999999999999999999877554444444332221111 11234789999999
Q ss_pred HhcccCCCCCCCHHHHHcCCc
Q 010013 306 KMLHADPKERLSAAEVLNHPW 326 (520)
Q Consensus 306 ~~l~~dp~~Rps~~~~l~~~~ 326 (520)
+||..||++|||+.++|+|||
T Consensus 233 ~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 233 KCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred HHccCChhhCCCHHHHhcCCC
Confidence 999999999999999999998
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-40 Score=321.38 Aligned_cols=258 Identities=29% Similarity=0.490 Sum_probs=203.0
Q ss_pred ceeecceeeccCCeEEEEEEEcC--CCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--CeE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKD--TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--HSV 143 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~--~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~--~~~ 143 (520)
+|.+.+.||+|+||.||+|.+.. +++.||+|.+...........+.+.+|+.++++++ ||||+++++++.+. ..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~ 79 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELK-HENVVSLVEVFLEHADKSV 79 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcC-CCCccceEEEEeCCCCceE
Confidence 48889999999999999999988 88999999987643222334467788999999998 99999999999988 889
Q ss_pred EEEEeccCCCchHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeec-CCCCCCeeEeeccc
Q 010013 144 NLIMDLCAGGELFDRIIAK-----GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSS-SAEDSPLKATDFGL 217 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~-~~~~~~~kl~Dfg~ 217 (520)
++||||+++ +|.+.+... ..+++..+..++.||+.||.|||+.||+||||||+||+++. ++.++.+||+|||+
T Consensus 80 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~ 158 (316)
T cd07842 80 YLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGL 158 (316)
T ss_pred EEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCcc
Confidence 999999965 676666432 26899999999999999999999999999999999999954 12267899999999
Q ss_pred ccccCCCC----cccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHH---------HHHHHH
Q 010013 218 SVFFKPGD----VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQS---------IFDAIL 282 (520)
Q Consensus 218 a~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~---------~~~~~~ 282 (520)
+....... ......+++.|+|||.+.+ .++.++|||||||++++|++|.+||.+..... ....+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (316)
T cd07842 159 ARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIF 238 (316)
T ss_pred ccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHH
Confidence 88754322 1233467889999998754 47889999999999999999999997654321 011110
Q ss_pred c--------------------------CCCCCCC-------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 283 R--------------------------GHIDFSS-------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 283 ~--------------------------~~~~~~~-------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
. ....++. ..+...+..+.+++.+||+.||++|||+.++++||||
T Consensus 239 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 239 EVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred HHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 0 0000000 0011456789999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=327.30 Aligned_cols=252 Identities=25% Similarity=0.377 Sum_probs=202.9
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCC-----CcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDT-----KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE 138 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~ 138 (520)
.-.++|.+++.||+|+||.||+|.+... +..||+|++.... .....+.+.+|+.+++++..||||+++++++.
T Consensus 34 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~ 111 (400)
T cd05105 34 FPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA--RSSEKQALMSELKIMTHLGPHLNIVNLLGACT 111 (400)
T ss_pred ccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEc
Confidence 3457899999999999999999987533 3469999986432 22345678999999999966999999999999
Q ss_pred eCCeEEEEEeccCCCchHHHHHhc--------------------------------------------------------
Q 010013 139 DRHSVNLIMDLCAGGELFDRIIAK-------------------------------------------------------- 162 (520)
Q Consensus 139 ~~~~~~lv~e~~~g~~L~~~l~~~-------------------------------------------------------- 162 (520)
..+..++|||||++|+|.+++...
T Consensus 112 ~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (400)
T cd05105 112 KSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPM 191 (400)
T ss_pred cCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchh
Confidence 999999999999999999887542
Q ss_pred ----------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEee
Q 010013 163 ----------------------------------------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFS 202 (520)
Q Consensus 163 ----------------------------------------~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~ 202 (520)
..+++..+..++.||+.||.|||+.||+||||||+|||++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~ 271 (400)
T cd05105 192 LEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLA 271 (400)
T ss_pred hhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEe
Confidence 2367788899999999999999999999999999999995
Q ss_pred cCCCCCCeeEeecccccccCCCCc---ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHH-
Q 010013 203 SSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQS- 276 (520)
Q Consensus 203 ~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~- 276 (520)
.+..+||+|||++........ .....+++.|+|||.+.+ .++.++|||||||++|+|++ |..||.......
T Consensus 272 ---~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~ 348 (400)
T cd05105 272 ---QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST 348 (400)
T ss_pred ---CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH
Confidence 466799999999986543221 122346788999998754 58999999999999999997 999997754433
Q ss_pred HHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
....+..+ .... ....++..+.+++.+||+.+|++|||+.++.+
T Consensus 349 ~~~~~~~~-~~~~--~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 349 FYNKIKSG-YRMA--KPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred HHHHHhcC-CCCC--CCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence 33333333 2222 22467899999999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-40 Score=324.78 Aligned_cols=264 Identities=29% Similarity=0.470 Sum_probs=214.9
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~ 142 (520)
..+.++|.+.+.||+|++|.||+|.+..+++.||+|++.... ......+.+.+|+.+++++. ||||+++++++...+.
T Consensus 11 ~~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~ 88 (343)
T cd07851 11 WEVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPF-QSAIHAKRTYRELRLLKHMD-HENVIGLLDVFTPASS 88 (343)
T ss_pred ecccCceEEEEEeccCCceEEEEEEECCCCcEEEEEeccccc-chhhHHHHHHHHHHHHHhcc-CCCHHHHHHHhhcccc
Confidence 346788999999999999999999999999999999876432 22234466778999999997 9999999988766554
Q ss_pred ------EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecc
Q 010013 143 ------VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (520)
Q Consensus 143 ------~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg 216 (520)
.++|+||+ +++|.+++.. .++++..+..++.||+.||.|||+.||+||||||+||+++ .++.++|+|||
T Consensus 89 ~~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~---~~~~~kL~dfg 163 (343)
T cd07851 89 LEDFQDVYLVTHLM-GADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN---EDCELKILDFG 163 (343)
T ss_pred ccccccEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCCEEEcccc
Confidence 89999998 6799887765 5799999999999999999999999999999999999994 56779999999
Q ss_pred cccccCCCCcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC-----
Q 010013 217 LSVFFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS----- 289 (520)
Q Consensus 217 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~----- 289 (520)
++...... .....+++.|+|||.+.+ .++.++|||||||++|++++|+.||.+......+..+.......+
T Consensus 164 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 241 (343)
T cd07851 164 LARHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQ 241 (343)
T ss_pred cccccccc--ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHh
Confidence 99875432 334567889999998754 478899999999999999999999987776555554433211000
Q ss_pred ------------------C----CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCCCCC
Q 010013 290 ------------------S----DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASD 335 (520)
Q Consensus 290 ------------------~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~~~~ 335 (520)
. ..+..++..+.++|.+||..+|++|||+.++++||||........
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~~~ 309 (343)
T cd07851 242 KISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDPED 309 (343)
T ss_pred hccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCCcc
Confidence 0 011346889999999999999999999999999999987655443
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-40 Score=316.35 Aligned_cols=256 Identities=30% Similarity=0.561 Sum_probs=212.3
Q ss_pred ceeecceeeccCCeEEEEEEEc---CCCcEEEEEEecccccCC-cccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHK---DTKQQFACKSISSRKLIN-RDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~---~~~~~~avK~~~~~~~~~-~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
.|++.+.||.|+||.||+|.+. .+|..||+|++....... ....+.+.+|+.+++++.+|+||+.+++.+..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 3788999999999999999875 468999999986543222 223466889999999997799999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
++||||+++++|.+++.....+++..+..++.|++.||.|||+.|++||||+|+|||++ .++.+||+|||++.....
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~~~~~~ 157 (290)
T cd05613 81 HLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLD---SNGHVVLTDFGLSKEFHE 157 (290)
T ss_pred EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEC---CCCCEEEeeCccceeccc
Confidence 99999999999999998888899999999999999999999999999999999999994 567899999999887643
Q ss_pred CC--cccccccCCCccCchhhcc---cCCCcchhHHHHHHHHHHhhCCCCCCCCCH----HHHHHHHHcCCCCCCCCCCC
Q 010013 224 GD--VFKDLVGSAYYVAPEVLRR---NYGAEADIWSAGVILYILLSGVPPFWGETE----QSIFDAILRGHIDFSSDPWP 294 (520)
Q Consensus 224 ~~--~~~~~~gt~~y~aPE~~~~---~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~ 294 (520)
.. ......|+..|+|||.+.. .++.++||||||+++|+|++|..||..... ......+......++ +
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~ 233 (290)
T cd05613 158 DEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYP----Q 233 (290)
T ss_pred ccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCCCC----c
Confidence 22 2224568899999998753 367899999999999999999999964332 333333433333222 3
Q ss_pred CCCHHHHHHHHHhcccCCCCCC-----CHHHHHcCCccccC
Q 010013 295 NISSSAKDIVKKMLHADPKERL-----SAAEVLNHPWMRVD 330 (520)
Q Consensus 295 ~~~~~~~~li~~~l~~dp~~Rp-----s~~~~l~~~~~~~~ 330 (520)
.++..+.+++.+||..+|++|| +++++++||||+..
T Consensus 234 ~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 274 (290)
T cd05613 234 EMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKI 274 (290)
T ss_pred cCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccC
Confidence 5788999999999999999997 89999999999754
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-39 Score=312.85 Aligned_cols=257 Identities=32% Similarity=0.528 Sum_probs=218.0
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
...+.|.+.+.||+|++|.||+|.+..++..+++|++..... ..+.+.+|+.+++.+. |+||+++++++......
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~ 90 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDCK-HPNIVDYYDSYLVGDEL 90 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHCC-CCCeeEEEEEEEECCEE
Confidence 455679999999999999999999998899999999864322 4567889999999998 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 144 NLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
++|+||++|++|.+++.... .+++..+..++.|++.||.|||+.|++|+||+|+||+++ .++.++|+|||++....
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~---~~~~~~l~d~~~~~~~~ 167 (286)
T cd06614 91 WVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLS---KDGSVKLADFGFAAQLT 167 (286)
T ss_pred EEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEc---CCCCEEECccchhhhhc
Confidence 99999999999999998876 899999999999999999999999999999999999994 56679999999887654
Q ss_pred CCC-cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHH
Q 010013 223 PGD-VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300 (520)
Q Consensus 223 ~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (520)
... ......+++.|+|||.+.+ .++.++||||||+++|+|++|..||...........+....... ......++..+
T Consensus 168 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l 246 (286)
T cd06614 168 KEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPP-LKNPEKWSPEF 246 (286)
T ss_pred cchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCC-CcchhhCCHHH
Confidence 322 2233457889999998764 47899999999999999999999998877655555544333221 11223478999
Q ss_pred HHHHHHhcccCCCCCCCHHHHHcCCcccc
Q 010013 301 KDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 301 ~~li~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
.++|.+||+.+|.+|||+.++++|+||..
T Consensus 247 ~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 275 (286)
T cd06614 247 KDFLNKCLVKDPEKRPSAEELLQHPFLKK 275 (286)
T ss_pred HHHHHHHhccChhhCcCHHHHhhChHhhc
Confidence 99999999999999999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-39 Score=309.41 Aligned_cols=251 Identities=26% Similarity=0.511 Sum_probs=209.2
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+.+.||+|+||.||+|.+..+|+.+|+|.+...........+.+.+|+.+++++. |+||+++++++...+..++|
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~-~~~i~~~~~~~~~~~~~~lv 80 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD-HPNVIKYLASFIENNELNIV 80 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCC-CCCeeeeeeeeecCCeEEEE
Confidence 57999999999999999999999899999999987544444445678999999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 147 MDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~----~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
|||+++++|.+++.. ...+++..+..++.|++.||.|||+.|++||||+|+||+++ .++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~---~~~~~~l~d~~~~~~~~ 157 (267)
T cd08224 81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFIT---ATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEEC---CCCcEEEeccceeeecc
Confidence 999999999988854 34589999999999999999999999999999999999994 56779999999987654
Q ss_pred CCC-cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCC--HHHHHHHHHcCCCCCCCCCCCCCCH
Q 010013 223 PGD-VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGET--EQSIFDAILRGHIDFSSDPWPNISS 298 (520)
Q Consensus 223 ~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (520)
... ......+++.|+|||.+.+ .++.++|||||||++|+|++|..||.... .....+.+..+.. ...+...++.
T Consensus 158 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 235 (267)
T cd08224 158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDY--PPLPADHYSE 235 (267)
T ss_pred CCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCC--CCCChhhcCH
Confidence 322 2233568889999998764 48889999999999999999999996543 2334444443322 1222236788
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 299 SAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 299 ~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.+.++|.+||..+|++|||+.++++
T Consensus 236 ~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 236 ELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred HHHHHHHHHcCCCcccCCCHHHHHH
Confidence 9999999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-40 Score=324.51 Aligned_cols=262 Identities=31% Similarity=0.490 Sum_probs=218.0
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC-----e
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH-----S 142 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~-----~ 142 (520)
+|.+.+.||+|++|.||+|.+..+++.+|+|.+.... ......+.+.+|+.+++.+. ||||+++++++.... .
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~~ 78 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVF-DDLIDAKRILREIKLLRHLR-HENIIGLLDILRPPSPEDFND 78 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeecccc-ccchhhhhHHHHHHHHHhcC-CcchhhhhhhhcccCcccccc
Confidence 5889999999999999999999889999999986432 22344577899999999998 999999999987765 7
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
.|+||||+. ++|.+.+.+...+++..+..++.||+.||.+||+.||+||||||+||+++ .++.++|+|||.+....
T Consensus 79 ~~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~---~~~~~~L~dfg~~~~~~ 154 (330)
T cd07834 79 VYIVTELME-TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVN---SNCDLKICDFGLARGVD 154 (330)
T ss_pred eEEEecchh-hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEcccCceEeec
Confidence 899999997 58989888877899999999999999999999999999999999999994 56789999999998765
Q ss_pred CCC----cccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCC-----
Q 010013 223 PGD----VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD----- 291 (520)
Q Consensus 223 ~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~----- 291 (520)
... ......+++.|+|||.+.+ .++.++||||||+++|+|++|..||.+....+....+..........
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 234 (330)
T cd07834 155 PDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFI 234 (330)
T ss_pred ccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhc
Confidence 432 2344568899999998854 47889999999999999999999998887766555554321111100
Q ss_pred ----------------------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCCCCC
Q 010013 292 ----------------------PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASD 335 (520)
Q Consensus 292 ----------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~~~~ 335 (520)
..+.++..+.++|.+||+.+|++|||+.++++||||+.....+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~~~ 300 (330)
T cd07834 235 TSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDPED 300 (330)
T ss_pred cccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccccc
Confidence 12346889999999999999999999999999999986655443
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=312.70 Aligned_cols=256 Identities=23% Similarity=0.377 Sum_probs=208.8
Q ss_pred cccceeecceeeccCCeEEEEEEEcC-----CCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKD-----TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~ 139 (520)
..++|.+.+.||+|+||.||+|.++. .+..+|+|.+.... .......+.+|+.+++.+. ||||+++++++..
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~ 80 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA--SLRERIEFLNEASVMKGFT-CHHVVRLLGVVSK 80 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC--CHHHHHHHHHHHHHHHhCC-CCCeeeEEEEEcC
Confidence 35789999999999999999997653 24579999875332 2223345788999999998 9999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCC
Q 010013 140 RHSVNLIMDLCAGGELFDRIIAKG----------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP 209 (520)
Q Consensus 140 ~~~~~lv~e~~~g~~L~~~l~~~~----------~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~ 209 (520)
....++||||+++|+|.+++...+ .++...+..++.|++.||.|||++|++||||||+||+++ .++.
T Consensus 81 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~---~~~~ 157 (288)
T cd05061 81 GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVA---HDFT 157 (288)
T ss_pred CCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEc---CCCc
Confidence 999999999999999999996532 346678899999999999999999999999999999994 5678
Q ss_pred eeEeecccccccCCCCc---ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcC
Q 010013 210 LKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRG 284 (520)
Q Consensus 210 ~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~ 284 (520)
++|+|||+++....... .....++..|+|||.+. +.++.++|||||||++|++++ |..||.+....+....+..+
T Consensus 158 ~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~ 237 (288)
T cd05061 158 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG 237 (288)
T ss_pred EEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence 99999999886533221 11224567899999876 458899999999999999998 78999888877777666554
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc------CCcccc
Q 010013 285 HIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN------HPWMRV 329 (520)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~------~~~~~~ 329 (520)
..... ...+++.+.+++.+||+.+|++|||+.++++ ||||..
T Consensus 238 ~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~ 285 (288)
T cd05061 238 GYLDQ---PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPE 285 (288)
T ss_pred CCCCC---CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCC
Confidence 33211 1356789999999999999999999999986 888864
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-39 Score=307.72 Aligned_cols=242 Identities=25% Similarity=0.344 Sum_probs=201.5
Q ss_pred ceeeccCCeEEEEEEE--cCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEecc
Q 010013 73 RELGRGQFGVTYLVTH--KDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLC 150 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~--~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~ 150 (520)
+.||+|+||.||+|.+ ..++..+|+|++.... ......+.+.+|+.+++.+. ||||+++++++. ....++||||+
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~-~~~~~lv~e~~ 77 (257)
T cd05116 1 GELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN-NDPALKDELLREANVMQQLD-NPYIVRMIGICE-AESWMLVMELA 77 (257)
T ss_pred CcCCCcCCcceEEeEEecCCCceEEEEEEccCCC-CcHHHHHHHHHHHHHHHhCC-CCCcceEEEEEc-CCCcEEEEecC
Confidence 3689999999999975 4567899999886432 23345677899999999998 999999999875 45678999999
Q ss_pred CCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCcc---
Q 010013 151 AGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF--- 227 (520)
Q Consensus 151 ~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~--- 227 (520)
++++|.+++...+.+++..+..++.|++.||.|||++|++||||||+||+++ .+..+||+|||++.........
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~---~~~~~kl~Dfg~~~~~~~~~~~~~~ 154 (257)
T cd05116 78 ELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLV---TQHYAKISDFGLSKALGADENYYKA 154 (257)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEc---CCCeEEECCCccccccCCCCCeeee
Confidence 9999999998888899999999999999999999999999999999999994 5677999999999876433211
Q ss_pred -cccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Q 010013 228 -KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (520)
Q Consensus 228 -~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (520)
....+++.|+|||.+.. .++.++|||||||++|++++ |..||......+....+..+.... ....+++++.++|
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~~---~~~~~~~~l~~li 231 (257)
T cd05116 155 KTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERME---CPQRCPPEMYDLM 231 (257)
T ss_pred cCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCC---CCCCCCHHHHHHH
Confidence 12234578999998864 57889999999999999998 999998888777777776654321 2246889999999
Q ss_pred HHhcccCCCCCCCHHHHHc
Q 010013 305 KKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 305 ~~~l~~dp~~Rps~~~~l~ 323 (520)
.+||+.||++||++.+|.+
T Consensus 232 ~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 232 KLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred HHHhccCchhCcCHHHHHH
Confidence 9999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-42 Score=325.41 Aligned_cols=258 Identities=30% Similarity=0.532 Sum_probs=236.2
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
..+.++..||-||||.|-++........+|+|++++.+.....+.+-+..|-+||..++ .|.||++|..|.+..++|++
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~-s~fIvrLYrTfrd~kyvYmL 498 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECR-SDFIVRLYRTFRDSKYVYML 498 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcC-chHHHHHHHHhccchhhhhh
Confidence 34556678999999999999887665669999999988888888888999999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCc
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 226 (520)
||-|-||.|...|...+.+.+.++..++..+++|+.|||++|||+|||||+|.++ +.++-+||.|||+|+.+..+..
T Consensus 499 mEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllL---d~~Gy~KLVDFGFAKki~~g~K 575 (732)
T KOG0614|consen 499 MEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLL---DNRGYLKLVDFGFAKKIGSGRK 575 (732)
T ss_pred HHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheee---ccCCceEEeehhhHHHhccCCc
Confidence 9999999999999999999999999999999999999999999999999999999 5678899999999999998888
Q ss_pred ccccccCCCccCchhh-cccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHH
Q 010013 227 FKDLVGSAYYVAPEVL-RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305 (520)
Q Consensus 227 ~~~~~gt~~y~aPE~~-~~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 305 (520)
..+++|||.|.|||++ +...+.++|.||||+++|||++|.+||.+.++...+..|.++.-.+..+ ..++....+||+
T Consensus 576 TwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~P--r~I~k~a~~Lik 653 (732)
T KOG0614|consen 576 TWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFP--RRITKTATDLIK 653 (732)
T ss_pred eeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcc--cccchhHHHHHH
Confidence 8899999999999975 6778999999999999999999999999999999999999886554433 478899999999
Q ss_pred HhcccCCCCCCC-----HHHHHcCCccccC
Q 010013 306 KMLHADPKERLS-----AAEVLNHPWMRVD 330 (520)
Q Consensus 306 ~~l~~dp~~Rps-----~~~~l~~~~~~~~ 330 (520)
++...+|.+|.. +.+|-+|.||...
T Consensus 654 ~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gf 683 (732)
T KOG0614|consen 654 KLCRDNPTERLGYQKGGINDIKKHRWFEGF 683 (732)
T ss_pred HHHhcCcHhhhccccCChHHHHhhhhhhcC
Confidence 999999999995 8999999999854
|
|
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=318.58 Aligned_cols=248 Identities=23% Similarity=0.337 Sum_probs=203.2
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcE----EEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQ----FACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~----~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~ 142 (520)
.+|++.+.||+|+||.||+|.+..++.. ||+|.+.... .....+.+.+|+.+++.+. ||||+++++++... .
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~-h~niv~~~g~~~~~-~ 82 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVD-NPHVCRLLGICLTS-T 82 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC--CHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEcCC-C
Confidence 5699999999999999999998766554 8999875321 2334567889999999998 99999999998764 5
Q ss_pred EEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 143 VNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
.++|+||+++|+|.+.+... ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++..
T Consensus 83 ~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~---~~~~~kl~DfG~a~~~ 159 (316)
T cd05108 83 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVK---TPQHVKITDFGLAKLL 159 (316)
T ss_pred ceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEec---CCCcEEEccccccccc
Confidence 67999999999999999874 4589999999999999999999999999999999999994 5677999999999876
Q ss_pred CCCCcc---cccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCC
Q 010013 222 KPGDVF---KDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (520)
Q Consensus 222 ~~~~~~---~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (520)
...... ....++..|+|||.+. ..++.++|||||||++|+|++ |..||.+....+....+.... .++. .+.+
T Consensus 160 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~~--~~~~ 236 (316)
T cd05108 160 GADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQ--PPIC 236 (316)
T ss_pred cCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCCC-CCCC--CCCC
Confidence 533221 1223456799999876 458999999999999999997 999998877666555444332 2222 2457
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 297 SSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 297 ~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
+..+.+++.+||..+|++|||+.+++.+
T Consensus 237 ~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 237 TIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 8899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-40 Score=297.86 Aligned_cols=257 Identities=27% Similarity=0.539 Sum_probs=229.2
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
..+|.+.+.||+|+|++|.+++++.|.+.||+|++++..+...+.++.+..|-.++.+..+||.+|-+..+|..+..+++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 46799999999999999999999999999999999998888888899999999999999999999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccc-cCCC
Q 010013 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF-FKPG 224 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~-~~~~ 224 (520)
|.||++||+|.-++.+.++++++.+..+...|+.||.|||++||++||||.+|+|+ +..+++||+|+|+++. +.++
T Consensus 329 vieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvll---daeghikltdygmcke~l~~g 405 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLL---DAEGHIKLTDYGMCKEGLGPG 405 (593)
T ss_pred EEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEE---ccCCceeecccchhhcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999 5678899999999986 4567
Q ss_pred CcccccccCCCccCchhhccc-CCCcchhHHHHHHHHHHhhCCCCCCC--------CCHHHHHHHHHcCCCCCCCCCCCC
Q 010013 225 DVFKDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWG--------ETEQSIFDAILRGHIDFSSDPWPN 295 (520)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~~-~~~~~Dv~slG~~l~~ll~g~~pf~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 295 (520)
+..++++|||.|.|||++++. |+..+|.|+|||+++||+.|+.||.- +.+.-+++.|....+..+. .
T Consensus 406 d~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiripr----s 481 (593)
T KOG0695|consen 406 DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPR----S 481 (593)
T ss_pred cccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccc----e
Confidence 777889999999999999875 99999999999999999999999942 1222344555655555543 4
Q ss_pred CCHHHHHHHHHhcccCCCCCC------CHHHHHcCCcccc
Q 010013 296 ISSSAKDIVKKMLHADPKERL------SAAEVLNHPWMRV 329 (520)
Q Consensus 296 ~~~~~~~li~~~l~~dp~~Rp------s~~~~l~~~~~~~ 329 (520)
++-.+..++...|++||.+|. ...++..|+||..
T Consensus 482 lsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~ 521 (593)
T KOG0695|consen 482 LSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRS 521 (593)
T ss_pred eehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhh
Confidence 577788999999999999997 4689999999974
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-40 Score=333.67 Aligned_cols=248 Identities=27% Similarity=0.496 Sum_probs=215.3
Q ss_pred ccceeecceeeccCCeEEEEEEEcC-----CCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKD-----TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~ 140 (520)
+....+.+.||+|+||+||+|+... ....||||.++... .....+.|++|++++..|+ |||||+|+|+|..+
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a--~~~~~~dF~REaeLla~l~-H~nIVrLlGVC~~~ 561 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA--ENQARQDFRREAELLAELQ-HPNIVRLLGVCREG 561 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc--cHHHHHHHHHHHHHHHhcc-CCCeEEEEEEEccC
Confidence 4556677999999999999998643 34779999986543 3345688999999999999 99999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCC
Q 010013 141 HSVNLIMDLCAGGELFDRIIAKG--------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAE 206 (520)
Q Consensus 141 ~~~~lv~e~~~g~~L~~~l~~~~--------------~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~ 206 (520)
+.+++|+||+..|+|.++|.... +|+..+...|+.||+.|+.||-++.+|||||-..|+|| ++
T Consensus 562 ~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLV---ge 638 (774)
T KOG1026|consen 562 DPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLV---GE 638 (774)
T ss_pred CeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhcee---cc
Confidence 99999999999999999996431 28889999999999999999999999999999999999 67
Q ss_pred CCCeeEeecccccccCCCCccccc---ccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHH
Q 010013 207 DSPLKATDFGLSVFFKPGDVFKDL---VGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAI 281 (520)
Q Consensus 207 ~~~~kl~Dfg~a~~~~~~~~~~~~---~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~ 281 (520)
+..|||+|||+++.+-..+.+.-. .-..+|||||.+. +.++.++||||+||+|||+++ |..||.+.+.++.++.+
T Consensus 639 ~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i 718 (774)
T KOG1026|consen 639 NLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECI 718 (774)
T ss_pred ceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHH
Confidence 888999999999987655543322 2346899999765 679999999999999999998 99999999999999999
Q ss_pred HcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHH
Q 010013 282 LRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVL 322 (520)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l 322 (520)
..+.. ++. ..++|.++.+|+..||+.+|.+||++.||-
T Consensus 719 ~~g~l-L~~--Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~ 756 (774)
T KOG1026|consen 719 RAGQL-LSC--PENCPTEVYSLMLECWNENPKRRPSFKEIH 756 (774)
T ss_pred HcCCc-ccC--CCCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence 99887 333 368999999999999999999999999984
|
|
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=307.03 Aligned_cols=242 Identities=25% Similarity=0.388 Sum_probs=200.6
Q ss_pred ceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 010013 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~g 152 (520)
+.||+|+||.||+|.++.+++.+|+|.+.... .......+.+|+.+++++. ||||+++++++......++||||+++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~ 77 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL--PPDLKAKFLQEARILKQYS-HPNIVRLIGVCTQKQPIYIVMELVQG 77 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccC--CHHHHHHHHHHHHHHHhCC-CCCcceEEEEEcCCCCeEEEEeeccC
Confidence 46999999999999999899999999875321 2334567899999999998 99999999999999999999999999
Q ss_pred CchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCccc---
Q 010013 153 GELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFK--- 228 (520)
Q Consensus 153 ~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~--- 228 (520)
++|.+++...+ .+++..+..++.|++.||.|||++|++||||||+||+++ .++.+||+|||++..........
T Consensus 78 ~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~~~~~~~~~~~~~~ 154 (252)
T cd05084 78 GDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVT---EKNVLKISDFGMSREEEDGVYASTGG 154 (252)
T ss_pred CcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEc---CCCcEEECccccCcccccccccccCC
Confidence 99999987644 589999999999999999999999999999999999994 56679999999987654321111
Q ss_pred ccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHH
Q 010013 229 DLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306 (520)
Q Consensus 229 ~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 306 (520)
...++..|+|||.+.+ .++.++||||||+++|++++ |..||...........+....... ....++..+.+++.+
T Consensus 155 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~ 231 (252)
T cd05084 155 MKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLP---CPELCPDAVYRLMER 231 (252)
T ss_pred CCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCC---CcccCCHHHHHHHHH
Confidence 1122456999998764 58889999999999999998 999998777766666555432221 224568999999999
Q ss_pred hcccCCCCCCCHHHHHc
Q 010013 307 MLHADPKERLSAAEVLN 323 (520)
Q Consensus 307 ~l~~dp~~Rps~~~~l~ 323 (520)
||..+|++|||+.++++
T Consensus 232 ~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 232 CWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred HcCCChhhCcCHHHHHH
Confidence 99999999999999975
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-39 Score=312.19 Aligned_cols=254 Identities=29% Similarity=0.470 Sum_probs=206.8
Q ss_pred eeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhcc--CCCCeeEEEEEEEeCCe----
Q 010013 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT--GHRNIVELKGAYEDRHS---- 142 (520)
Q Consensus 69 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~--~hp~iv~l~~~~~~~~~---- 142 (520)
|++.+.||+|+||.||+|.++.+++.+|+|.+..... .......+.+|+.+++++. .||||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLS-EEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccc-cchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 6788999999999999999998899999999864432 2222345667888887774 39999999999988776
Q ss_pred -EEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccc
Q 010013 143 -VNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (520)
Q Consensus 143 -~~lv~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~ 219 (520)
++++|||+.+ +|.+++.... .+++..+..++.|++.||.|||+.|++|+||+|+||+++ .++.++|+|||.+.
T Consensus 80 ~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~---~~~~~~l~dfg~~~ 155 (287)
T cd07838 80 KLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVT---SDGQVKIADFGLAR 155 (287)
T ss_pred eeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEc---cCCCEEEeccCcce
Confidence 9999999975 7888887643 489999999999999999999999999999999999995 45789999999998
Q ss_pred ccCCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCC-----CC----
Q 010013 220 FFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID-----FS---- 289 (520)
Q Consensus 220 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~-----~~---- 289 (520)
............++..|+|||.+.+ .++.++|||||||++|+|++|.+||.+....+....+...... ++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
T cd07838 156 IYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVS 235 (287)
T ss_pred eccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcc
Confidence 7654444444567889999998864 4788999999999999999999999888776665555431100 00
Q ss_pred --------------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 290 --------------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 290 --------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
....+.++..+.++|.+||+.||++||++.++++||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 236 LPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred cchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 00012456788999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-39 Score=306.46 Aligned_cols=246 Identities=22% Similarity=0.411 Sum_probs=206.7
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+.+.||+|+||.||+|.+.. +..+|+|.+..... ..+.+.+|+.+++++. ||||+++++++......++|
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~----~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 77 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSM----SEDEFIEEAKVMMKLS-HEKLVQLYGVCTKQRPIYIV 77 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcc----cHHHHHHHHHHHhcCC-CCCeeeEEEEEccCCCcEEE
Confidence 468999999999999999998765 45699998864322 2366889999999998 99999999999988999999
Q ss_pred EeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 147 MDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
|||+.+++|.+++... ..+++..+..++.||+.||.|||+.|++|+||||+||+++ .++.+||+|||.++......
T Consensus 78 ~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~---~~~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05113 78 TEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVD---DQGCVKVSDFGLSRYVLDDE 154 (256)
T ss_pred EEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEc---CCCCEEECCCccceecCCCc
Confidence 9999999999988764 4689999999999999999999999999999999999994 56779999999988654332
Q ss_pred ccc--ccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHH
Q 010013 226 VFK--DLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (520)
Q Consensus 226 ~~~--~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (520)
... ...++..|+|||.+. +.++.++||||||+++|+|++ |..||...........+..+...... ...+..+.
T Consensus 155 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 231 (256)
T cd05113 155 YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYRP---HLASEKVY 231 (256)
T ss_pred eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCCC---CCCCHHHH
Confidence 211 123456799999986 458889999999999999998 99999888777777777665443322 34578999
Q ss_pred HHHHHhcccCCCCCCCHHHHHcC
Q 010013 302 DIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 302 ~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
+++.+||+.+|++|||+.+++++
T Consensus 232 ~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 232 AIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred HHHHHHcCCCcccCCCHHHHHHh
Confidence 99999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-39 Score=313.58 Aligned_cols=257 Identities=26% Similarity=0.455 Sum_probs=213.0
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
....|...+.||+|+||.||+|.++.++..+|+|.+.............+.+|+.+++.+. |+|++++++++......+
T Consensus 13 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 91 (308)
T cd06634 13 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQYRGCYLREHTAW 91 (308)
T ss_pred cHHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCC-CCCcccEEEEEEcCCeeE
Confidence 3456888899999999999999999999999999986543333344567888999999998 999999999999999999
Q ss_pred EEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 145 LIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
+||||+. ++|.+.+.. ...+++..+..++.|++.||.|||+.|++||||+|+||+++ .++.++|+|||++.....
T Consensus 92 lv~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~~~~~~ 167 (308)
T cd06634 92 LVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS---EPGLVKLGDFGSASIMAP 167 (308)
T ss_pred EEEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEEC---CCCcEEECCcccceeecC
Confidence 9999996 577776654 45689999999999999999999999999999999999994 467899999999887543
Q ss_pred CCcccccccCCCccCchhhc----ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHH
Q 010013 224 GDVFKDLVGSAYYVAPEVLR----RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (520)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~----~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (520)
. ....+++.|+|||.+. +.++.++|||||||++|+|++|..||...........+........ ....++..
T Consensus 168 ~---~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 242 (308)
T cd06634 168 A---NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPAL--QSGHWSEY 242 (308)
T ss_pred c---ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCc--CcccccHH
Confidence 2 3346888999999874 3478899999999999999999999987665544444444332211 12357889
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 300 AKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 300 ~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
+.++|.+||..+|++||++.++++|||+....
T Consensus 243 ~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~ 274 (308)
T cd06634 243 FRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 274 (308)
T ss_pred HHHHHHHHhhCCcccCCCHHHHhhCccccccC
Confidence 99999999999999999999999999998653
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-40 Score=273.23 Aligned_cols=256 Identities=28% Similarity=0.527 Sum_probs=214.0
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 147 (520)
.|.-.++||+|.||+||+|+++.+++.||+|.+...... .-.-....+|+.+|+.+. |.|||+++++...++.+-+|+
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrldddd-egvpssalreicllkelk-hknivrl~dvlhsdkkltlvf 80 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDD-EGVPSSALREICLLKELK-HKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCC-CCCcHHHHHHHHHHHHhh-hcceeehhhhhccCceeEEeH
Confidence 466678999999999999999999999999998754321 112356789999999998 999999999999999999999
Q ss_pred eccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC-
Q 010013 148 DLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (520)
Q Consensus 148 e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~- 225 (520)
|||. .+|..+... ++.++.+.+..++.|++.||.++|++++.||||||+|.|++ .++.+||.|||+++.+.-.-
T Consensus 81 e~cd-qdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin---~ngelkladfglarafgipvr 156 (292)
T KOG0662|consen 81 EFCD-QDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLIN---RNGELKLADFGLARAFGIPVR 156 (292)
T ss_pred HHhh-HHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEec---cCCcEEecccchhhhcCCceE
Confidence 9994 578777765 56799999999999999999999999999999999999995 57779999999999875432
Q ss_pred cccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCC--------
Q 010013 226 VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWP-------- 294 (520)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-------- 294 (520)
-++..+-|..|.+|.++-+ -|+...|+||.||++.|+.. |++.|.+..-.+.+..|.+.........|+
T Consensus 157 cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdy 236 (292)
T KOG0662|consen 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDY 236 (292)
T ss_pred eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCC
Confidence 3455677999999998754 38999999999999999987 888899988777777775433322222222
Q ss_pred -----------------CCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcccc
Q 010013 295 -----------------NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 295 -----------------~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
.++..-+++++++|.-+|.+|++++++|+||||..
T Consensus 237 k~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d 288 (292)
T KOG0662|consen 237 KPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSD 288 (292)
T ss_pred cccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCccccc
Confidence 34566789999999999999999999999999974
|
|
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-39 Score=311.52 Aligned_cols=249 Identities=23% Similarity=0.390 Sum_probs=206.0
Q ss_pred cceeecceeeccCCeEEEEEEEc----CCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHK----DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~----~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~ 142 (520)
+.|++.+.||+|+||.||+|.+. .++..+|+|.+.... .......+.+|+.+++++. ||||+++++++.....
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~ 81 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN--NPQQWGEFQQEASLMAELH-HPNIVCLLGVVTQEQP 81 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCC-CCCeeeEEEEEecCCc
Confidence 46889999999999999999863 345789999886422 2334467889999999998 9999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCC
Q 010013 143 VNLIMDLCAGGELFDRIIAK-----------------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA 205 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~-----------------~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~ 205 (520)
.++||||+++++|.+++... ..+++..+..++.|++.||.|||++|++||||||+||+++
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~--- 158 (283)
T cd05090 82 VCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIG--- 158 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEc---
Confidence 99999999999999988532 2478889999999999999999999999999999999994
Q ss_pred CCCCeeEeecccccccCCCC---cccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHH
Q 010013 206 EDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDA 280 (520)
Q Consensus 206 ~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~ 280 (520)
.+..+||+|||++....... ......++..|+|||.+. +.++.++||||||+++|+|++ |..||.+.........
T Consensus 159 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~ 238 (283)
T cd05090 159 EQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEM 238 (283)
T ss_pred CCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 56679999999998654322 112334567799999886 458899999999999999998 9999988777666666
Q ss_pred HHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 281 ILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
+....... ....++..+.+++.+||+.+|.+||++.+++++
T Consensus 239 ~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 239 VRKRQLLP---CSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred HHcCCcCC---CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 65543221 224678999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-39 Score=307.97 Aligned_cols=249 Identities=22% Similarity=0.391 Sum_probs=208.0
Q ss_pred cceeecceeeccCCeEEEEEEEcCC---CcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDT---KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
++|++.+.||+|+||.||+|.++.+ ...+|+|.+.... .......+.+|+.++++++ ||||+++++++...+..
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 80 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS--SDKQRLDFLTEASIMGQFD-HPNIIRLEGVVTKSRPV 80 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC--ChHHHHHHHHHHHHHHhCC-CCCcceEeEEEecCCce
Confidence 5689999999999999999998654 4579999876432 2334466888999999998 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 144 NLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
++||||+++++|.+++... +.+++..+..++.|++.||.|||++||+|+||||+||+++ .++.++|+|||++....
T Consensus 81 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~---~~~~~~l~dfg~~~~~~ 157 (266)
T cd05033 81 MIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVN---SNLVCKVSDFGLSRRLE 157 (266)
T ss_pred EEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEc---CCCCEEECccchhhccc
Confidence 9999999999999998764 4689999999999999999999999999999999999994 56779999999998764
Q ss_pred CCC-ccc--ccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 010013 223 PGD-VFK--DLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (520)
Q Consensus 223 ~~~-~~~--~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (520)
... ... ...+++.|+|||.+.+ .++.++||||||+++|++++ |..||...........+....... ....++
T Consensus 158 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~ 234 (266)
T cd05033 158 DSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLP---PPMDCP 234 (266)
T ss_pred ccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCC---CCCCCC
Confidence 211 111 1234568999998864 58899999999999999998 999998888777777776543221 124678
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 298 SSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 298 ~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
..+.+++.+||+.+|++||++.+++++
T Consensus 235 ~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 235 SALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred HHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-39 Score=315.31 Aligned_cols=251 Identities=26% Similarity=0.442 Sum_probs=206.4
Q ss_pred ccceeecceeeccCCeEEEEEEEcC-------CCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKD-------TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE 138 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~-------~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~ 138 (520)
.++|.+++.||+|+||.||++.+.. +...+|+|.+.... .......+.+|+.+++++.+||||+++++++.
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGACT 94 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC--ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe
Confidence 4679999999999999999998753 23569999886432 23345678889999999966999999999999
Q ss_pred eCCeEEEEEeccCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEee
Q 010013 139 DRHSVNLIMDLCAGGELFDRIIAKG----------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFS 202 (520)
Q Consensus 139 ~~~~~~lv~e~~~g~~L~~~l~~~~----------------~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~ 202 (520)
..+..++||||+++++|.+++...+ .+++..+..++.|++.||.|||++|++||||||+||+++
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~ 174 (307)
T cd05098 95 QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT 174 (307)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEc
Confidence 9999999999999999999997642 478899999999999999999999999999999999994
Q ss_pred cCCCCCCeeEeecccccccCCCCcc---cccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHH
Q 010013 203 SSAEDSPLKATDFGLSVFFKPGDVF---KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSI 277 (520)
Q Consensus 203 ~~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~ 277 (520)
.++.+||+|||.+......... ....+++.|+|||.+.+ .++.++|||||||++|+|++ |..||.+....+.
T Consensus 175 ---~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~ 251 (307)
T cd05098 175 ---EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 251 (307)
T ss_pred ---CCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHH
Confidence 5678999999998765432211 11234568999998764 48899999999999999998 8999988877776
Q ss_pred HHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 278 FDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
...+...... .....++..+.+++.+||+.+|++|||+.+++++
T Consensus 252 ~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~ 295 (307)
T cd05098 252 FKLLKEGHRM---DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 295 (307)
T ss_pred HHHHHcCCCC---CCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 6666554321 1224678999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-39 Score=318.71 Aligned_cols=260 Identities=30% Similarity=0.478 Sum_probs=208.3
Q ss_pred ceeecceeeccCCeEEEEEEEcCC--CcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe----CC
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDT--KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED----RH 141 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~----~~ 141 (520)
+|.+.+.||+|+||.||++.+..+ +..+|+|.+.... ......+.+.+|+.+++++.+||||+++++.... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVF-SKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccc-ccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 488899999999999999999887 8999999986422 2223356678899999999779999999986432 25
Q ss_pred eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 142 SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
.++++++++. ++|.+.+.....+++..+..++.||+.||.|||+.|++||||||+||+++ .++.++|+|||++...
T Consensus 80 ~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~---~~~~~kl~Dfg~a~~~ 155 (332)
T cd07857 80 ELYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVN---ADCELKICDFGLARGF 155 (332)
T ss_pred cEEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEc---CCCCEEeCcCCCceec
Confidence 6788999985 68999998888899999999999999999999999999999999999994 5677999999999865
Q ss_pred CCCC-----cccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCC---------
Q 010013 222 KPGD-----VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH--------- 285 (520)
Q Consensus 222 ~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~--------- 285 (520)
.... ......|++.|+|||.+.+ .++.++||||+||++|++++|.+||...........+....
T Consensus 156 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (332)
T cd07857 156 SENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLS 235 (332)
T ss_pred ccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 4321 1233578999999998753 47889999999999999999999998766443333222110
Q ss_pred ------------------CCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 286 ------------------IDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 286 ------------------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
.......++.++..+.+++.+||+.+|++|||+.+++.|||+....+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~~ 300 (332)
T cd07857 236 RIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWHD 300 (332)
T ss_pred hhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhcC
Confidence 00001123456889999999999999999999999999999976544
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=315.77 Aligned_cols=258 Identities=29% Similarity=0.515 Sum_probs=208.6
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC--
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH-- 141 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~-- 141 (520)
...+.|.+.+.||+|+||.||+|.++.+++.||+|.+..... .......+.+|+.++++++ ||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~~e~~~~~~l~-h~~i~~~~~~~~~~~~~ 81 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNE-KEGFPITAIREIKILRQLN-HRNIVNLKEIVTDKQDA 81 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccc-ccCchHHHHHHHHHHHhCC-CCCeeeeeheecCcchh
Confidence 345789999999999999999999999999999999864322 2223356778999999998 999999999887654
Q ss_pred --------eEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeE
Q 010013 142 --------SVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKA 212 (520)
Q Consensus 142 --------~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl 212 (520)
.+++|+||+++ ++...+... ..+++..+..++.||+.||.|||+.||+|+||||+||++ ++++.+||
T Consensus 82 ~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili---~~~~~~kl 157 (302)
T cd07864 82 LDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILL---NNKGQIKL 157 (302)
T ss_pred hhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCcEEe
Confidence 79999999976 676666553 468999999999999999999999999999999999999 45678999
Q ss_pred eecccccccCCCC--cccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCC
Q 010013 213 TDFGLSVFFKPGD--VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDF 288 (520)
Q Consensus 213 ~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~ 288 (520)
+|||.+....... ......++..|+|||.+.+ .++.++|||||||++|+|++|++||...........+.......
T Consensus 158 ~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~ 237 (302)
T cd07864 158 ADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSP 237 (302)
T ss_pred CcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence 9999998764322 1223356788999998753 36889999999999999999999998776655544443321100
Q ss_pred C--------------------------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 289 S--------------------------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 289 ~--------------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
. ...+..++..+.+++.+||+.+|++|||+.+++.||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 238 CPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred ChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 0 01123578999999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-40 Score=310.64 Aligned_cols=245 Identities=29% Similarity=0.491 Sum_probs=200.4
Q ss_pred eecceeeccCCeEEEEEEEc----CCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 70 IFGRELGRGQFGVTYLVTHK----DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 70 ~~~~~lg~G~~g~Vy~~~~~----~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.+.+.||.|+||.||+|.+. ..+..|+||.+.. .......+.+.+|++.+++++ ||||+++++++...+..++
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~--~~~~~~~~~~~~e~~~l~~l~-h~ni~~~~g~~~~~~~~~l 78 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKP--SSSEEEEEEFLNEIQILRKLR-HPNIVKLYGFCIENEPLFL 78 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEEST--TSSHHHHHHHHHHHHHHHTHS-BTTBE-EEEEEESSSSEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecc--ccccccceeeeeccccccccc-ccccccccccccccccccc
Confidence 35689999999999999998 3467899999843 223445788999999999996 9999999999998888999
Q ss_pred EEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 146 IMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
||||+++|+|.+++... ..+++..+..|+.||+.||.|||+++++|++|+++||+++ .++.+||+|||++.....
T Consensus 79 v~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~---~~~~~Kl~~f~~~~~~~~ 155 (259)
T PF07714_consen 79 VMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLD---SNGQVKLSDFGLSRPISE 155 (259)
T ss_dssp EEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEE---TTTEEEEESTTTGEETTT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccc
Confidence 99999999999999886 6799999999999999999999999999999999999995 466899999999987632
Q ss_pred CCcc---cccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCH
Q 010013 224 GDVF---KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298 (520)
Q Consensus 224 ~~~~---~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (520)
.... ....+...|+|||.+.. .++.++||||||+++||+++ |+.||......+....+..+..... ...++.
T Consensus 156 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 232 (259)
T PF07714_consen 156 KSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLPI---PDNCPK 232 (259)
T ss_dssp SSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETTS---BTTSBH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccee---ccchhH
Confidence 2211 22346678999999864 48999999999999999999 7899998888888888755544221 246789
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 299 SAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 299 ~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.+.+++.+||..+|++|||+.++++
T Consensus 233 ~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 233 DIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp HHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHh
Confidence 9999999999999999999999975
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-39 Score=312.45 Aligned_cols=255 Identities=29% Similarity=0.527 Sum_probs=212.4
Q ss_pred eeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 010013 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMD 148 (520)
Q Consensus 69 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e 148 (520)
|.....||+|+||.||++....++..+|+|.+... .....+.+.+|+.+++.+. ||||+++++++...+..++|||
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e 97 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLR---KQQRRELLFNEVVIMRDYQ-HENVVEMYNSYLVGDELWVVME 97 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEeccc---chhHHHHHHHHHHHHHhcC-CcchhheeeEEEeCCEEEEEEe
Confidence 44457899999999999999999999999987432 2234567889999999998 9999999999999999999999
Q ss_pred ccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC-cc
Q 010013 149 LCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD-VF 227 (520)
Q Consensus 149 ~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-~~ 227 (520)
|+++++|.+++. .+.+++..+..++.|++.||.|||+.|++|+||+|+||+++ .++.++|+|||++....... ..
T Consensus 98 ~~~~~~L~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~---~~~~~~l~dfg~~~~~~~~~~~~ 173 (292)
T cd06657 98 FLEGGALTDIVT-HTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRR 173 (292)
T ss_pred cCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEEcccccceecccccccc
Confidence 999999988664 45689999999999999999999999999999999999994 56779999999987654322 22
Q ss_pred cccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHH
Q 010013 228 KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306 (520)
Q Consensus 228 ~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 306 (520)
....|++.|+|||.+.+ .++.++|+||+|+++|+|++|..||.+.........+...... .......++..+.+++.+
T Consensus 174 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~ 252 (292)
T cd06657 174 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-KLKNLHKVSPSLKGFLDR 252 (292)
T ss_pred cccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCc-ccCCcccCCHHHHHHHHH
Confidence 33568899999998864 4788999999999999999999999887766555554433221 111234678999999999
Q ss_pred hcccCCCCCCCHHHHHcCCccccCCC
Q 010013 307 MLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 307 ~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
||..+|.+||++.++|+||||.....
T Consensus 253 ~l~~~P~~R~~~~~ll~~~~~~~~~~ 278 (292)
T cd06657 253 LLVRDPAQRATAAELLKHPFLAKAGP 278 (292)
T ss_pred HHhCCcccCcCHHHHhcChHHhccCC
Confidence 99999999999999999999986653
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-39 Score=306.91 Aligned_cols=243 Identities=25% Similarity=0.428 Sum_probs=208.9
Q ss_pred ceeeccCCeEEEEEEEcCC---CcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEec
Q 010013 73 RELGRGQFGVTYLVTHKDT---KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDL 149 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~~---~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~ 149 (520)
+.||+|+||.||+|.+... +..+++|.+...... ...+.+.+|+.+++.+. |+||+++++++.....+++||||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~e~ 77 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASE--EERKDFLKEARVMKKLG-HPNVVRLLGVCTEEEPLYLVLEY 77 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccch--hHHHHHHHHHHHHhhcC-CCChheeeeeecCCCceEEEEEe
Confidence 4699999999999999865 889999998654321 24678899999999998 99999999999999999999999
Q ss_pred cCCCchHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccc
Q 010013 150 CAGGELFDRIIAK---------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (520)
Q Consensus 150 ~~g~~L~~~l~~~---------~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 220 (520)
+++++|.+++... ..+++..+..++.|++.||.|||++|++|+||+|+||+++ .++.++|+|||.+..
T Consensus 78 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~---~~~~~~l~dfg~~~~ 154 (262)
T cd00192 78 MEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVG---EDLVVKISDFGLSRD 154 (262)
T ss_pred ccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEEC---CCCcEEEcccccccc
Confidence 9999999999875 6799999999999999999999999999999999999994 567899999999987
Q ss_pred cCCCC---cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCC
Q 010013 221 FKPGD---VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295 (520)
Q Consensus 221 ~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (520)
..... ......+++.|+|||.+.. .++.++||||||+++|+|++ |..||...........+..+... .....
T Consensus 155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~ 231 (262)
T cd00192 155 VYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRL---PKPEY 231 (262)
T ss_pred cccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC---CCCcc
Confidence 65432 2234467889999998864 58899999999999999999 69999988887777777653322 12246
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 296 ISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 296 ~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
++..+.+++.+||..+|++|||+.+++++
T Consensus 232 ~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 232 CPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred CChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 68999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=320.89 Aligned_cols=251 Identities=24% Similarity=0.372 Sum_probs=200.4
Q ss_pred ccceeecceeeccCCeEEEEEEEcC-----CCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe-
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKD-----TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED- 139 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~- 139 (520)
.++|++.+.||+|+||.||+|.+.. +++.||+|++.... .....+.+.+|+.++.++..||||+++++++..
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~ 83 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA--TASEYKALMTELKILIHIGHHLNVVNLLGACTKP 83 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC--CHHHHHHHHHHHHHHHhhccCcchhheeeeEecC
Confidence 4689999999999999999997543 35789999885322 223346678899999999559999999998764
Q ss_pred CCeEEEEEeccCCCchHHHHHhc---------------------------------------------------------
Q 010013 140 RHSVNLIMDLCAGGELFDRIIAK--------------------------------------------------------- 162 (520)
Q Consensus 140 ~~~~~lv~e~~~g~~L~~~l~~~--------------------------------------------------------- 162 (520)
+..++++|||+++++|.+++...
T Consensus 84 ~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (337)
T cd05054 84 GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGD 163 (337)
T ss_pred CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhh
Confidence 46788999999999999888542
Q ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCc---ccccccCCC
Q 010013 163 ----GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAY 235 (520)
Q Consensus 163 ----~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~ 235 (520)
.++++..+..++.||+.||.|||++||+||||||+|||++ .++.++|+|||++..+..... .....++..
T Consensus 164 ~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~---~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~ 240 (337)
T cd05054 164 ELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKDPDYVRKGDARLPLK 240 (337)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEe---CCCcEEEeccccchhcccCcchhhccCCCCCcc
Confidence 2578999999999999999999999999999999999995 466799999999987633221 122345678
Q ss_pred ccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHH-HHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCC
Q 010013 236 YVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSI-FDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312 (520)
Q Consensus 236 y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp 312 (520)
|+|||++. ..++.++|||||||++|+|++ |..||.+....+. ...+..+.... . ....++++.+++.+||+.+|
T Consensus 241 y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~l~~~cl~~~p 317 (337)
T cd05054 241 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMR-A--PEYATPEIYSIMLDCWHNNP 317 (337)
T ss_pred ccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCC-C--CccCCHHHHHHHHHHccCCh
Confidence 99999875 458999999999999999998 9999987554333 33333322211 1 13567899999999999999
Q ss_pred CCCCCHHHHHcC
Q 010013 313 KERLSAAEVLNH 324 (520)
Q Consensus 313 ~~Rps~~~~l~~ 324 (520)
++||++.++++|
T Consensus 318 ~~RPs~~ell~~ 329 (337)
T cd05054 318 EDRPTFSELVEI 329 (337)
T ss_pred hhCcCHHHHHHH
Confidence 999999999874
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=321.47 Aligned_cols=263 Identities=30% Similarity=0.495 Sum_probs=211.9
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe--CC
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED--RH 141 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~--~~ 141 (520)
.+.++|.+.+.||+|+||.||+|.+..+++.+|+|.+... .........+.+|+.+++++.+||||+++++++.. ..
T Consensus 4 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~-~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~ 82 (337)
T cd07852 4 HILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDA-FRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDK 82 (337)
T ss_pred hhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccc-cCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCc
Confidence 4567899999999999999999999988999999988543 22333445677899999999349999999998864 34
Q ss_pred eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 142 SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
..++||||+. ++|.+.+... .+++..+..++.||+.||.|||+.||+|+||||+||++ +.++.+||+|||++...
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill---~~~~~~kl~d~g~~~~~ 157 (337)
T cd07852 83 DIYLVFEYME-TDLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILL---NSDCRVKLADFGLARSL 157 (337)
T ss_pred eEEEEecccc-cCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCcEEEeeccchhcc
Confidence 6899999996 5898887665 78999999999999999999999999999999999999 46778999999999865
Q ss_pred CCCC------cccccccCCCccCchhhc--ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCC--------
Q 010013 222 KPGD------VFKDLVGSAYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH-------- 285 (520)
Q Consensus 222 ~~~~------~~~~~~gt~~y~aPE~~~--~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~-------- 285 (520)
.... ......|++.|+|||.+. ..++.++||||||+++|+|++|+.||.+.........+....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 237 (337)
T cd07852 158 SELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDI 237 (337)
T ss_pred ccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 4322 223356889999999874 347889999999999999999999998766544433322211
Q ss_pred -------------------CCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 286 -------------------IDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 286 -------------------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
........+.++..+.++|.+||+.+|++|||+.++++|||++....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~ 303 (337)
T cd07852 238 ESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHN 303 (337)
T ss_pred HHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhcc
Confidence 11111123457889999999999999999999999999999976543
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-39 Score=306.58 Aligned_cols=246 Identities=24% Similarity=0.402 Sum_probs=207.0
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.++|++.++||+|+||.||+|.+.. +..+|+|.+.... ...+.+.+|+.+++++. ||||+++++++...+..++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~-~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l 78 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNN-STKVAVKTLKPGT----MSVQAFLEEANLMKTLQ-HDKLVRLYAVVTKEEPIYI 78 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecC-CceEEEEEccCCc----hhHHHHHHHHHHHHhCC-CCCeeeEEEEEcCCCCcEE
Confidence 3679999999999999999998754 5779999875432 23567889999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 146 IMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
+|||+++++|.+++... ..+++..+..++.|++.||.|||+.|++||||||+||+++ .++.++|+|||++.....
T Consensus 79 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~---~~~~~~l~dfg~~~~~~~ 155 (261)
T cd05072 79 ITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVS---ESLMCKIADFGLARVIED 155 (261)
T ss_pred EEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEec---CCCcEEECCCccceecCC
Confidence 99999999999988653 4588999999999999999999999999999999999994 567899999999987643
Q ss_pred CCc--ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHH
Q 010013 224 GDV--FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (520)
Q Consensus 224 ~~~--~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (520)
... .....++..|+|||.+. +.++.++|||||||++|+|++ |..||...........+..... . .....++..
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~ 232 (261)
T cd05072 156 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYR-M--PRMENCPDE 232 (261)
T ss_pred CceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCC-C--CCCCCCCHH
Confidence 221 12234567899999886 458889999999999999998 9999988887777777665432 1 223467899
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHc
Q 010013 300 AKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 300 ~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
+.+++.+||..+|++|||+.++++
T Consensus 233 ~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 233 LYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred HHHHHHHHccCCcccCcCHHHHHH
Confidence 999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-39 Score=312.82 Aligned_cols=252 Identities=24% Similarity=0.415 Sum_probs=208.6
Q ss_pred cccceeecceeeccCCeEEEEEEEcCC-----CcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDT-----KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~ 139 (520)
..++|.+.+.||+|+||.||++.++.. ...+|+|.+.... .......+.+|+.+++++.+||||+++++++..
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 87 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ 87 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC--CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC
Confidence 446799999999999999999998643 3689999886432 233446688999999999559999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeec
Q 010013 140 RHSVNLIMDLCAGGELFDRIIAK----------------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSS 203 (520)
Q Consensus 140 ~~~~~lv~e~~~g~~L~~~l~~~----------------~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~ 203 (520)
.+.++++|||+++++|.+++... ..+++..+..++.|++.||.|||+.||+||||||+||+++
T Consensus 88 ~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~- 166 (293)
T cd05053 88 EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVT- 166 (293)
T ss_pred CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEc-
Confidence 99999999999999999998642 3588999999999999999999999999999999999994
Q ss_pred CCCCCCeeEeecccccccCCCCcc---cccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHH
Q 010013 204 SAEDSPLKATDFGLSVFFKPGDVF---KDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIF 278 (520)
Q Consensus 204 ~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~ 278 (520)
.++.+||+|||+++........ ....++..|+|||.+. ..++.++|||||||++|++++ |..||.+....+..
T Consensus 167 --~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~ 244 (293)
T cd05053 167 --EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELF 244 (293)
T ss_pred --CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHH
Confidence 5678999999999876433211 1223456799999875 458899999999999999997 99999888877777
Q ss_pred HHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 279 DAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
..+....... ....++..+.+|+.+||..+|++|||+.+++++
T Consensus 245 ~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 245 KLLKEGYRME---KPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred HHHHcCCcCC---CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 7666543221 123668899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-41 Score=299.09 Aligned_cols=259 Identities=22% Similarity=0.307 Sum_probs=214.3
Q ss_pred eecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEec
Q 010013 70 IFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDL 149 (520)
Q Consensus 70 ~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~ 149 (520)
+-...||.|+||+|++..++.+|+..|||.+..... ....++++.|.....+-.++||||++||....++..||.||+
T Consensus 67 qdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~--~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMEL 144 (361)
T KOG1006|consen 67 QDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI--EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMEL 144 (361)
T ss_pred HHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc--hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHH
Confidence 334679999999999999999999999999975432 345577889998888888899999999999999999999999
Q ss_pred cCCCchHHHH-----HhcCCCCHHHHHHHHHHHHHHHHHHH-HcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 150 CAGGELFDRI-----IAKGHYSERAAANLCRQMVTVVHYCH-SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 150 ~~g~~L~~~l-----~~~~~l~~~~~~~i~~qi~~~l~~LH-~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
+ ..+|..+. .++..+++..+..|....+.||.||- +.+|+|||+||+|||+ +..+.+||||||++-.+..
T Consensus 145 M-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILl---dr~G~vKLCDFGIcGqLv~ 220 (361)
T KOG1006|consen 145 M-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILL---DRHGDVKLCDFGICGQLVD 220 (361)
T ss_pred H-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEE---ecCCCEeeecccchHhHHH
Confidence 9 44654322 23567999999999999999999998 4689999999999999 5577799999999988766
Q ss_pred CCcccccccCCCccCchhhc---ccCCCcchhHHHHHHHHHHhhCCCCCCCCC-HHHHHHHHHcCCCCCCCCCC--CCCC
Q 010013 224 GDVFKDLVGSAYYVAPEVLR---RNYGAEADIWSAGVILYILLSGVPPFWGET-EQSIFDAILRGHIDFSSDPW--PNIS 297 (520)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~ 297 (520)
+-..+...|...|||||.+. ..|+.++||||||++|||+.||..||..-+ --+.+..+..+..+...... -.++
T Consensus 221 SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s 300 (361)
T KOG1006|consen 221 SIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYS 300 (361)
T ss_pred HHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccC
Confidence 65556678999999999885 348999999999999999999999996643 34455556666655433322 2478
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCCCC
Q 010013 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDAS 334 (520)
Q Consensus 298 ~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~~~ 334 (520)
..++.+|..||.+|.+.||...+++++||+.......
T Consensus 301 ~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~~~~ 337 (361)
T KOG1006|consen 301 FSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMYAVEG 337 (361)
T ss_pred HHHHHHHHHHhhcccccCcchhhhhcCchhhhhhhcC
Confidence 8999999999999999999999999999998765443
|
|
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-39 Score=312.52 Aligned_cols=252 Identities=23% Similarity=0.319 Sum_probs=206.9
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCC----------------cEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCC
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTK----------------QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN 129 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~----------------~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~ 129 (520)
.++|.+.+.||+|+||.||+|.+..++ ..+|+|.+.... .....+.+.+|+++++++. |||
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~-~~~ 80 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA--SDNAREDFLKEVKILSRLS-DPN 80 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhcC-CCC
Confidence 467999999999999999999876543 457999886432 2244677899999999998 999
Q ss_pred eeEEEEEEEeCCeEEEEEeccCCCchHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCc
Q 010013 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKG-----------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPEN 198 (520)
Q Consensus 130 iv~l~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-----------~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~N 198 (520)
|+++++++..+...+++||++++++|.+++.+.. .+++..+..++.|++.||.|||++|++|+||||+|
T Consensus 81 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~N 160 (296)
T cd05051 81 IARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRN 160 (296)
T ss_pred EeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhc
Confidence 9999999999999999999999999999987765 68999999999999999999999999999999999
Q ss_pred EEeecCCCCCCeeEeecccccccCCCCc---ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh--CCCCCCCC
Q 010013 199 FLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS--GVPPFWGE 272 (520)
Q Consensus 199 Ill~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~--g~~pf~~~ 272 (520)
|+++ .++.++|+|||++........ .....+++.|+|||.+.+ .++.++|||||||++|+|++ |..||...
T Consensus 161 ili~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~ 237 (296)
T cd05051 161 CLVG---KNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHL 237 (296)
T ss_pred eeec---CCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCc
Confidence 9994 457899999999886543321 123346778999998764 68999999999999999998 77888777
Q ss_pred CHHHHHHHHHcC----CCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 273 TEQSIFDAILRG----HIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 273 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
........+... .........+.++.++.+++.+||+.||++|||+.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 238 TDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred ChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 766666555432 111111122456789999999999999999999999965
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-39 Score=312.86 Aligned_cols=260 Identities=25% Similarity=0.363 Sum_probs=209.4
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
..+.|.+.+.||+|+||.||+|.+..+++.+|+|.+..... ......+..|+.++.++.+||||+++++++.+....+
T Consensus 13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~ 90 (296)
T cd06618 13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGN--KEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVF 90 (296)
T ss_pred CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCC--hHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEE
Confidence 34679999999999999999999998899999999864322 2234556678877777777999999999999999999
Q ss_pred EEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 145 LIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~-~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
++|||+. +++.+.+.. ...+++..+..++.|++.||.|||+ .||+||||+|+||++ +.++.+||+|||++....
T Consensus 91 ~v~e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill---~~~~~~kL~dfg~~~~~~ 166 (296)
T cd06618 91 ICMELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILL---DASGNVKLCDFGISGRLV 166 (296)
T ss_pred EEeeccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEE---cCCCCEEECccccchhcc
Confidence 9999985 467666654 4578999999999999999999997 699999999999999 456789999999988765
Q ss_pred CCCcccccccCCCccCchhhcc-----cCCCcchhHHHHHHHHHHhhCCCCCCCCCH-HHHHHHHHcCCCCCCCCCCCCC
Q 010013 223 PGDVFKDLVGSAYYVAPEVLRR-----NYGAEADIWSAGVILYILLSGVPPFWGETE-QSIFDAILRGHIDFSSDPWPNI 296 (520)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 296 (520)
.........+++.|+|||.+.+ .++.++||||||+++|+|++|+.||..... .+....+........ .....+
T Consensus 167 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 245 (296)
T cd06618 167 DSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSL-PPNEGF 245 (296)
T ss_pred CCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCC-CCCCCC
Confidence 4333344467889999998853 268899999999999999999999976432 334444443332211 111257
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 297 SSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 297 ~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
+..+.+++.+||+.||++||++.++++||||....
T Consensus 246 ~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 280 (296)
T cd06618 246 SPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYE 280 (296)
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHhcChhhhccc
Confidence 88999999999999999999999999999998644
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=298.52 Aligned_cols=264 Identities=29% Similarity=0.468 Sum_probs=207.7
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCC----cEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe-C
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTK----QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED-R 140 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~----~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~-~ 140 (520)
...|.+++.||+|.||.||+|..++++ ..+|||.+......+. .....-+|+.+++.+. ||||+.+..++.. +
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tG-iS~SAcREiaL~REl~-h~nvi~Lv~Vfl~~d 100 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTG-ISMSACREIALLRELK-HPNVISLVKVFLSHD 100 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCC-cCHHHHHHHHHHHHhc-CCcchhHHHHHhccC
Confidence 356999999999999999999776553 3789998875433222 2345678999999999 9999999998876 8
Q ss_pred CeEEEEEeccCCCchHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecC-CCCCCeeEee
Q 010013 141 HSVNLIMDLCAGGELFDRIIA-----KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSS-AEDSPLKATD 214 (520)
Q Consensus 141 ~~~~lv~e~~~g~~L~~~l~~-----~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~-~~~~~~kl~D 214 (520)
..+++++||.+. +|...++- ...++..++..|+.||+.|+.|||++.|+||||||.|||+..+ .+.+.|||+|
T Consensus 101 ~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaD 179 (438)
T KOG0666|consen 101 KKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIAD 179 (438)
T ss_pred ceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeec
Confidence 899999999965 78777742 2458999999999999999999999999999999999999754 2458999999
Q ss_pred cccccccCCC----CcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCH---------HHHHH
Q 010013 215 FGLSVFFKPG----DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETE---------QSIFD 279 (520)
Q Consensus 215 fg~a~~~~~~----~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~---------~~~~~ 279 (520)
||+++.+... ......+-|..|.|||.+-| .|+++.||||.||++.||++-++.|.+... .+.+.
T Consensus 180 lGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~ 259 (438)
T KOG0666|consen 180 LGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLD 259 (438)
T ss_pred ccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHH
Confidence 9999987533 13345677999999998864 599999999999999999999888866432 12333
Q ss_pred HHHcCCCCCCCCCCC---------------------------------CCCHHHHHHHHHhcccCCCCCCCHHHHHcCCc
Q 010013 280 AILRGHIDFSSDPWP---------------------------------NISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326 (520)
Q Consensus 280 ~~~~~~~~~~~~~~~---------------------------------~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~ 326 (520)
.|..-........|+ .-++...+|+.+||..||.+|.|++++|+|+|
T Consensus 260 rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~y 339 (438)
T KOG0666|consen 260 RIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPY 339 (438)
T ss_pred HHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccc
Confidence 333222111222222 12455789999999999999999999999999
Q ss_pred cccCCC
Q 010013 327 MRVDGD 332 (520)
Q Consensus 327 ~~~~~~ 332 (520)
|..+.-
T Consensus 340 F~~d~l 345 (438)
T KOG0666|consen 340 FTEDPL 345 (438)
T ss_pred cccCCC
Confidence 986643
|
|
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-39 Score=305.23 Aligned_cols=246 Identities=25% Similarity=0.455 Sum_probs=204.5
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
.+|++.+.||+|+||.||+|.++. +..+|+|++..... ..+.+.+|+.+++++. ||||+++++++...+..++|
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~-~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv 77 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRG-KIDVAIKMIREGAM----SEDDFIEEAKVMMKLS-HPNLVQLYGVCTKQRPIFIV 77 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecC-CccEEEEEeccCCC----CHHHHHHHHHHHHhCC-CCCEEEEEEEEcCCCceEEE
Confidence 358899999999999999998864 56799998754322 2356788999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 147 MDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
|||++|++|.+++... ..+++..+..++.||+.||.|||+.|++||||||+||+++ .++.+||+|||.++......
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~---~~~~~kl~dfg~~~~~~~~~ 154 (256)
T cd05059 78 TEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVG---EDNVVKVSDFGLARYVLDDQ 154 (256)
T ss_pred EecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEEC---CCCcEEECCcccceeccccc
Confidence 9999999999998764 4689999999999999999999999999999999999994 56789999999987654322
Q ss_pred ccc--ccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHH
Q 010013 226 VFK--DLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (520)
Q Consensus 226 ~~~--~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (520)
... ...++..|+|||.+. ..++.++||||||+++|++++ |..||......+....+....... ....++..+.
T Consensus 155 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 231 (256)
T cd05059 155 YTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRLY---RPKLAPTEVY 231 (256)
T ss_pred ccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcCC---CCCCCCHHHH
Confidence 111 112345799999876 458899999999999999999 899998887777776665542211 1235789999
Q ss_pred HHHHHhcccCCCCCCCHHHHHcC
Q 010013 302 DIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 302 ~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
+++.+||+.+|++|||+.++++.
T Consensus 232 ~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 232 TIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred HHHHHHhcCChhhCcCHHHHHHH
Confidence 99999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-39 Score=308.27 Aligned_cols=248 Identities=23% Similarity=0.369 Sum_probs=202.2
Q ss_pred eeecceeeccCCeEEEEEEEcCCCc--EEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe------C
Q 010013 69 YIFGRELGRGQFGVTYLVTHKDTKQ--QFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED------R 140 (520)
Q Consensus 69 y~~~~~lg~G~~g~Vy~~~~~~~~~--~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~------~ 140 (520)
|.+++.||+|+||.||+|.+..++. .+|+|.+.... ......+.+.+|+.+++.++ ||||+++++++.. .
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~ 78 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAI-CTRSEMEDFLSEAVCMKEFD-HPNVMRLIGVCLQTVESEGY 78 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCc-CCHHHHHHHHHHHHHHHhCC-CCCcceEEEEEccCCcccCC
Confidence 4577899999999999999987765 58999876432 23445677889999999998 9999999997643 2
Q ss_pred CeEEEEEeccCCCchHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEee
Q 010013 141 HSVNLIMDLCAGGELFDRIIA------KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATD 214 (520)
Q Consensus 141 ~~~~lv~e~~~g~~L~~~l~~------~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~D 214 (520)
...+++|||+.+++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|
T Consensus 79 ~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~D 155 (272)
T cd05075 79 PSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCML---NENMNVCVAD 155 (272)
T ss_pred CCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEE---cCCCCEEECC
Confidence 357899999999999887742 2348899999999999999999999999999999999999 4567899999
Q ss_pred cccccccCCCCcc---cccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCC
Q 010013 215 FGLSVFFKPGDVF---KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFS 289 (520)
Q Consensus 215 fg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~ 289 (520)
||++......... ....+++.|+|||.+.+ .++.++||||||+++|+|++ |..||.+.........+..+....
T Consensus 156 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~- 234 (272)
T cd05075 156 FGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLK- 234 (272)
T ss_pred CCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCC-
Confidence 9999876433211 12245678999998864 48899999999999999999 899998888777777776654321
Q ss_pred CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 290 SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 290 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
..+.++..+.+++.+||+.+|++|||+.+++++
T Consensus 235 --~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 235 --QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred --CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 124678899999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-39 Score=304.99 Aligned_cols=246 Identities=23% Similarity=0.366 Sum_probs=206.1
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.++|.+.+.||+|++|.||+|.+.. ++.||+|.+..... ..+.+.+|+.++++++ ||||+++++++...+..++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~-~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l 78 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNN-TTPVAVKTLKPGTM----DPKDFLAEAQIMKKLR-HPKLIQLYAVCTLEEPIYI 78 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecC-CeEEEEEeeCCCcc----cHHHHHHHHHHHHHCC-CCCccceeEEEecCCCeee
Confidence 4679999999999999999999764 57899999865332 3466889999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 146 IMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
||||+++++|.+++.... .+++..+..++.|++.||.+||+.|++||||||+||+++ .++.++|+|||++.....
T Consensus 79 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~~l~dfg~~~~~~~ 155 (261)
T cd05068 79 VTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVG---ENNICKVADFGLARVIKE 155 (261)
T ss_pred eeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEc---CCCCEEECCcceEEEccC
Confidence 999999999999987644 689999999999999999999999999999999999994 567799999999987653
Q ss_pred CCcc--cccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHH
Q 010013 224 GDVF--KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (520)
Q Consensus 224 ~~~~--~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (520)
.... .....+..|+|||.+.+ .++.++||||||+++|+|++ |+.||.+.........+..... .+ ....++..
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~ 232 (261)
T cd05068 156 DIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYR-MP--CPPGCPKE 232 (261)
T ss_pred CcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-CC--CCCcCCHH
Confidence 2211 11122357999998764 58889999999999999999 9999988887777766655422 11 22467899
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHc
Q 010013 300 AKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 300 ~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
+.+++.+||+.+|++||++.++++
T Consensus 233 ~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 233 LYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred HHHHHHHHhhcCcccCCCHHHHHH
Confidence 999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-39 Score=305.56 Aligned_cols=251 Identities=27% Similarity=0.484 Sum_probs=215.6
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 147 (520)
+|.+.+.||+|+||.||++.+..+++.+|+|.+..... .......+.+|+.++++++ ||||+++++++......++||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~ 78 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSM-SQKEREDAVNEIRILASVN-HPNIISYKEAFLDGNKLCIVM 78 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhc-cHHHHHHHHHHHHHHHhCC-CCCchhhhhhhccCCEEEEEe
Confidence 48889999999999999999999999999999865433 2334567788999999998 999999999999999999999
Q ss_pred eccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 148 DLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 148 e~~~g~~L~~~l~~----~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
||+++++|.+++.. ...+++..+..++.|++.||.|||+.|++|+||+|+||+++ .++.+||+|||++.....
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~---~~~~~kl~d~g~~~~~~~ 155 (256)
T cd08530 79 EYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLV---ANDLVKIGDLGISKVLKK 155 (256)
T ss_pred hhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEe---cCCcEEEeeccchhhhcc
Confidence 99999999998866 35689999999999999999999999999999999999995 466799999999987654
Q ss_pred CCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHH
Q 010013 224 GDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (520)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (520)
. ......+++.|+|||.+.+ .++.++|+||||+++|+|++|+.||...........+......... ..++.++.+
T Consensus 156 ~-~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 231 (256)
T cd08530 156 N-MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPIP---PIYSQDLQN 231 (256)
T ss_pred C-CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCc---hhhCHHHHH
Confidence 4 3334568899999999864 4788999999999999999999999988877766666554433221 367889999
Q ss_pred HHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 303 IVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 303 li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
++.+||+.+|++|||+.++++||++
T Consensus 232 li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 232 FIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred HHHHHcCCCcccCCCHHHHhcCCCC
Confidence 9999999999999999999999974
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-39 Score=342.56 Aligned_cols=149 Identities=30% Similarity=0.528 Sum_probs=136.9
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+.+.||+|+||.||+|.+..+++.||||++.............+..|+.++..+. ||||+++++++.....+|+|
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~-hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSK-SPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcC-CCCcCeEEEEEEECCEEEEE
Confidence 57999999999999999999999999999999997655545555678899999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccc
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~ 219 (520)
|||+.|++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++
T Consensus 83 mEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~---~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLIS---NEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEc---CCCCEEEEeCCCCc
Confidence 99999999999998888899999999999999999999999999999999999994 56789999999875
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-39 Score=311.37 Aligned_cols=248 Identities=22% Similarity=0.372 Sum_probs=207.5
Q ss_pred cceeecceeeccCCeEEEEEEEcCC-----CcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDT-----KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~ 141 (520)
.+|.+.+.||+|+||.||+|.+..+ +..+|+|++.... .....+.+.+|+.++..+. ||||+++++++....
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~-h~~iv~~~~~~~~~~ 81 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA--EGPLREEFKHEAMMRSRLQ-HPNIVCLLGVVTKEQ 81 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHhcCC-CCCcCeEEEEEcCCC
Confidence 4588899999999999999987543 5789999986432 2233466889999999998 999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCC
Q 010013 142 SVNLIMDLCAGGELFDRIIAK----------------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA 205 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~l~~~----------------~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~ 205 (520)
..++++||+.+++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||++.
T Consensus 82 ~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~--- 158 (283)
T cd05091 82 PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVF--- 158 (283)
T ss_pred ceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEec---
Confidence 999999999999999988532 3478888999999999999999999999999999999994
Q ss_pred CCCCeeEeecccccccCCCCc---ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHH
Q 010013 206 EDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDA 280 (520)
Q Consensus 206 ~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~ 280 (520)
++..+||+|||+++....... .....+++.|+|||.+. +.++.++|||||||++|+|++ |..||.+....+....
T Consensus 159 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~ 238 (283)
T cd05091 159 DKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEM 238 (283)
T ss_pred CCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 566799999999886543221 12334577899999875 568899999999999999998 8899988888888888
Q ss_pred HHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 281 ILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
+........ ...++..+.+++.+||+.+|++||++.+++.
T Consensus 239 i~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~ 278 (283)
T cd05091 239 IRNRQVLPC---PDDCPAWVYTLMLECWNEFPSRRPRFKDIHS 278 (283)
T ss_pred HHcCCcCCC---CCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 776654322 2467899999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-39 Score=308.52 Aligned_cols=249 Identities=21% Similarity=0.360 Sum_probs=207.3
Q ss_pred ccceeecceeeccCCeEEEEEEEcCC-----CcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDT-----KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~ 140 (520)
.++|.+.+.||+|+||.||+|.++.. +..+|+|.+.... .......+.+|+.+++.+. ||||+++++++...
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~ 81 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA--SMRERIEFLNEASVMKEFN-CHHVVRLLGVVSTG 81 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc--CHHHHHHHHHHHHHHHhCC-CCceeEEEEEEcCC
Confidence 46799999999999999999998754 3789999975432 2233456889999999998 99999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCe
Q 010013 141 HSVNLIMDLCAGGELFDRIIAKG----------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPL 210 (520)
Q Consensus 141 ~~~~lv~e~~~g~~L~~~l~~~~----------~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~ 210 (520)
...++||||+++++|.+++.... .+++..+..++.|++.||.|||+.|++||||||+||+++ .++.+
T Consensus 82 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~---~~~~~ 158 (277)
T cd05032 82 QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVA---EDLTV 158 (277)
T ss_pred CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEc---CCCCE
Confidence 99999999999999999886532 367889999999999999999999999999999999994 56789
Q ss_pred eEeecccccccCCCCc---ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCC
Q 010013 211 KATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285 (520)
Q Consensus 211 kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~ 285 (520)
||+|||+++....... .....++..|+|||.+. +.++.++|||||||++|++++ |..||...........+..+.
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~ 238 (277)
T cd05032 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGG 238 (277)
T ss_pred EECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcCC
Confidence 9999999886543321 12335678899999875 458899999999999999998 999998888777777766443
Q ss_pred CCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 286 IDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 286 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.... ...++..+.+++.+||+.+|++|||+.++++
T Consensus 239 ~~~~---~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 273 (277)
T cd05032 239 HLDL---PENCPDKLLELMRMCWQYNPKMRPTFLEIVS 273 (277)
T ss_pred CCCC---CCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 2211 2356899999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-39 Score=311.85 Aligned_cols=253 Identities=31% Similarity=0.502 Sum_probs=207.9
Q ss_pred eeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 010013 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMD 148 (520)
Q Consensus 69 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e 148 (520)
|.+.+.||+|++|.||+|....+++.+++|.+..... . .......+|+..++++.+||||+++++++.+++..++|||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~-~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFY-S-WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhcc-c-hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 6788999999999999999998899999998864322 1 1223445789999999879999999999999999999999
Q ss_pred ccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCc
Q 010013 149 LCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226 (520)
Q Consensus 149 ~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 226 (520)
|+ +++|.+.+.... .+++..+..++.|++.+|.|||++|++|+||+|+||++ +.++.++|+|||.+........
T Consensus 79 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i---~~~~~~~l~d~~~~~~~~~~~~ 154 (283)
T cd07830 79 YM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLV---SGPEVVKIADFGLAREIRSRPP 154 (283)
T ss_pred cC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE---cCCCCEEEeecccceeccCCCC
Confidence 99 789999887764 78999999999999999999999999999999999999 4577899999999987655444
Q ss_pred ccccccCCCccCchhhc--ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCC----------------
Q 010013 227 FKDLVGSAYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDF---------------- 288 (520)
Q Consensus 227 ~~~~~gt~~y~aPE~~~--~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~---------------- 288 (520)
.....++..|+|||.+. ..++.++|+||||+++++|++|++||......+....+.......
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd07830 155 YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLG 234 (283)
T ss_pred cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccc
Confidence 45567889999999874 347889999999999999999999998776554443332210000
Q ss_pred ---C-------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 289 ---S-------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 289 ---~-------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
+ ....+..+..+.++|++||+.+|++|||+.|++.||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 235 FRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred ccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 0 00112346889999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-39 Score=310.54 Aligned_cols=247 Identities=24% Similarity=0.423 Sum_probs=206.0
Q ss_pred cceeecceeeccCCeEEEEEEEcC-----CCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKD-----TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~ 141 (520)
.+|.+.+.||+|+||.||+|.+.. ++..+++|.+.... ....+.+.+|+.+++++. ||||+++++++....
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~ 80 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT---LAARKDFQREAELLTNLQ-HEHIVKFYGVCGDGD 80 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc---HHHHHHHHHHHHHHhcCC-CCCcceEEEEEccCC
Confidence 468899999999999999998643 35668888875322 233467889999999998 999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCC
Q 010013 142 SVNLIMDLCAGGELFDRIIAKG----------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA 205 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~l~~~~----------------~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~ 205 (520)
..++||||+++++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+||+++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~--- 157 (291)
T cd05094 81 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVG--- 157 (291)
T ss_pred ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEc---
Confidence 9999999999999999986542 378999999999999999999999999999999999994
Q ss_pred CCCCeeEeecccccccCCCCc---ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHH
Q 010013 206 EDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDA 280 (520)
Q Consensus 206 ~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~ 280 (520)
.++.++|+|||++........ .....+++.|+|||.+. ..++.++||||||+++|+|++ |..||......+..+.
T Consensus 158 ~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~ 237 (291)
T cd05094 158 ANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIEC 237 (291)
T ss_pred cCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 567899999999976543221 12345678899999876 457889999999999999998 9999988887777776
Q ss_pred HHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 281 ILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
+..+..... ...++..+.+++.+||+.+|++|||+.++++
T Consensus 238 ~~~~~~~~~---~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 238 ITQGRVLER---PRVCPKEVYDIMLGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred HhCCCCCCC---CccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 665544322 2356889999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=312.21 Aligned_cols=251 Identities=25% Similarity=0.413 Sum_probs=206.4
Q ss_pred cccceeecceeeccCCeEEEEEEEcC-------CCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKD-------TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAY 137 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-------~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~ 137 (520)
..++|.+++.||+|+||.||+|.+.. ....+|+|.+.... .......+.+|+.+++++..||||+++++++
T Consensus 10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 87 (314)
T cd05099 10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA--TDKDLADLISEMELMKLIGKHKNIINLLGVC 87 (314)
T ss_pred cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC--ChHHHHHHHHHHHHHHhccCCCCeeeEEEEE
Confidence 34689999999999999999998642 34578999876432 2334567889999999996699999999999
Q ss_pred EeCCeEEEEEeccCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEe
Q 010013 138 EDRHSVNLIMDLCAGGELFDRIIAK----------------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLF 201 (520)
Q Consensus 138 ~~~~~~~lv~e~~~g~~L~~~l~~~----------------~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll 201 (520)
...+.+++||||+++++|.+++... ..+++..+..++.||+.||.|||++|++||||||+||++
T Consensus 88 ~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill 167 (314)
T cd05099 88 TQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLV 167 (314)
T ss_pred ccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEE
Confidence 9999999999999999999998653 247889999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEeecccccccCCCCc---ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHH
Q 010013 202 SSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQS 276 (520)
Q Consensus 202 ~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~ 276 (520)
+ .++.+||+|||+++....... .....++..|+|||.+.+ .++.++||||||+++|++++ |..||.+....+
T Consensus 168 ~---~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~ 244 (314)
T cd05099 168 T---EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEE 244 (314)
T ss_pred c---CCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 4 567799999999986543221 112234567999998764 58899999999999999999 899998888777
Q ss_pred HHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
....+...... .....++..+.+++.+||..+|++|||+.++++
T Consensus 245 ~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 245 LFKLLREGHRM---DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred HHHHHHcCCCC---CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 77776654321 112467889999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=353.88 Aligned_cols=261 Identities=28% Similarity=0.474 Sum_probs=222.2
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~ 142 (520)
..+.-+|..+..||.|.||.||.|.+.+||...|+|.+.-.... ......+.+|+.+|..+. |||+|++||+-...+.
T Consensus 1231 snV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-~k~~~~i~eEm~vlE~ln-HpNlV~YyGVEvHRek 1308 (1509)
T KOG4645|consen 1231 SNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-HKTFKLIAEEMKVLEGLN-HPNLVRYYGVEVHREK 1308 (1509)
T ss_pred ccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-cccCcchHHHHHHHHhcc-CccccccCceeecHHH
Confidence 34555677788999999999999999999999999988654332 455677899999999999 9999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
++|.||||.||+|.+.+...+-.++.....+..|++.|+.|||++|||||||||.||++ +.++.+|++|||.|..+.
T Consensus 1309 v~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~L---d~~g~iK~~DFGsa~ki~ 1385 (1509)
T KOG4645|consen 1309 VYIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILL---DFNGLIKYGDFGSAVKIK 1385 (1509)
T ss_pred HHHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceee---ecCCcEEeecccceeEec
Confidence 99999999999999998887778888888899999999999999999999999999999 557789999999999876
Q ss_pred CCC-----cccccccCCCccCchhhcc----cCCCcchhHHHHHHHHHHhhCCCCCCCCC-HHHHHHHHHcCCCCCCCCC
Q 010013 223 PGD-----VFKDLVGSAYYVAPEVLRR----NYGAEADIWSAGVILYILLSGVPPFWGET-EQSIFDAILRGHIDFSSDP 292 (520)
Q Consensus 223 ~~~-----~~~~~~gt~~y~aPE~~~~----~~~~~~Dv~slG~~l~~ll~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~ 292 (520)
... .....+||+.|||||++.+ +...+.|||||||++.||+||+.||.... +-.+...+..+..+-.+
T Consensus 1386 ~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P-- 1463 (1509)
T KOG4645|consen 1386 NNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIP-- 1463 (1509)
T ss_pred CchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCc--
Confidence 542 3345789999999999854 35678999999999999999999996644 34555555555543322
Q ss_pred CCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 293 ~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
..++++.++||..||..||++|+++.|+|+|.|-+...
T Consensus 1464 -~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~~ 1501 (1509)
T KOG4645|consen 1464 -ERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSCT 1501 (1509)
T ss_pred -hhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhcccccc
Confidence 34899999999999999999999999999999987543
|
|
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-39 Score=318.06 Aligned_cols=253 Identities=21% Similarity=0.317 Sum_probs=200.2
Q ss_pred ceeecc--CCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEecc
Q 010013 73 RELGRG--QFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLC 150 (520)
Q Consensus 73 ~~lg~G--~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~ 150 (520)
..||.| +||+||++.+..+|+.||+|++..... .....+.+.+|+.+++.++ ||||+++++++..+...++||||+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~~~~l~-h~niv~~~~~~~~~~~~~~v~e~~ 81 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENC-TEEHLKALQNEVVLSHFFR-HPNIMTSWTVFTTGSWLWVISPFM 81 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccC-CHHHHHHHHHHHHHHHhCC-CCCcceEeeeEecCCceEEEEecc
Confidence 456666 999999999999999999999865432 2334578899999999898 999999999999999999999999
Q ss_pred CCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCc--
Q 010013 151 AGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV-- 226 (520)
Q Consensus 151 ~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~-- 226 (520)
.+++|.+++.+. ..+++..+..++.||+.||.|||+.|++||||||+||++. .++.++++||+.+........
T Consensus 82 ~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~---~~~~~~~~~~~~~~~~~~~~~~~ 158 (328)
T cd08226 82 AYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILIS---GDGLVSLSGLSHLYSLVRNGQKA 158 (328)
T ss_pred cCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEe---CCCcEEEechHHHhhhhccCccc
Confidence 999999988764 3589999999999999999999999999999999999995 466799999986543221110
Q ss_pred ------ccccccCCCccCchhhcc---cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC--------
Q 010013 227 ------FKDLVGSAYYVAPEVLRR---NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS-------- 289 (520)
Q Consensus 227 ------~~~~~gt~~y~aPE~~~~---~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~-------- 289 (520)
.....++..|+|||++.+ .++.++|||||||++|+|++|..||...................+
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (328)
T cd08226 159 KVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPC 238 (328)
T ss_pred cccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccch
Confidence 011234567999999864 368899999999999999999999987665444333322211000
Q ss_pred -----------------------------------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 290 -----------------------------------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 290 -----------------------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
......++..+.+|+++||..||++|||+.++|+||||...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~ 314 (328)
T cd08226 239 EESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQV 314 (328)
T ss_pred hhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHH
Confidence 00112356789999999999999999999999999999754
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-39 Score=306.11 Aligned_cols=243 Identities=26% Similarity=0.366 Sum_probs=197.6
Q ss_pred ceeeccCCeEEEEEEEcCCCc--EEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEecc
Q 010013 73 RELGRGQFGVTYLVTHKDTKQ--QFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLC 150 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~~~~--~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~ 150 (520)
+.||+|+||.||+|.++.++. .+++|.+... ......+.+.+|+.++.++..||||+++++++...+..++||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 78 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 78 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEcccc--CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeC
Confidence 368999999999999988775 4577776532 223345678899999999966999999999999999999999999
Q ss_pred CCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEee
Q 010013 151 AGGELFDRIIAKG----------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATD 214 (520)
Q Consensus 151 ~g~~L~~~l~~~~----------------~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~D 214 (520)
++++|.+++.... .+++..+..++.|++.||.|||++|++||||||+||++ +.++.+||+|
T Consensus 79 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili---~~~~~~kl~d 155 (270)
T cd05047 79 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENYVAKIAD 155 (270)
T ss_pred CCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEE---cCCCeEEECC
Confidence 9999999987543 47899999999999999999999999999999999999 4567899999
Q ss_pred cccccccCCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCC
Q 010013 215 FGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDP 292 (520)
Q Consensus 215 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 292 (520)
||++..............+..|+|||++.. .++.++|||||||++|+|++ |..||.+.........+...... ..
T Consensus 156 fgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~---~~ 232 (270)
T cd05047 156 FGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRL---EK 232 (270)
T ss_pred CCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCCCC---CC
Confidence 999864321111111233567999998864 58889999999999999997 99999887777766666543211 12
Q ss_pred CCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 293 ~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
...++..+.+++.+||..+|.+|||+.+++.
T Consensus 233 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 233 PLNCDDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred CCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 2357889999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-39 Score=306.94 Aligned_cols=248 Identities=22% Similarity=0.362 Sum_probs=203.5
Q ss_pred eeecceeeccCCeEEEEEEEcCC---CcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe---
Q 010013 69 YIFGRELGRGQFGVTYLVTHKDT---KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS--- 142 (520)
Q Consensus 69 y~~~~~lg~G~~g~Vy~~~~~~~---~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~--- 142 (520)
|.+++.||+|+||.||+|.+..+ +..+|+|.+..... .....+.+.+|+.+++.+. ||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~ 78 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIH-TYSEIEEFLSEAACMKDFD-HPNVMKLIGVCFEASSLQK 78 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcC-CHHHHHHHHHHHHHHHhCC-CCCeeeEEeeeccCCcccc
Confidence 56789999999999999988653 47899999864322 3344567899999999998 9999999998765443
Q ss_pred ---EEEEEeccCCCchHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEe
Q 010013 143 ---VNLIMDLCAGGELFDRIIAK------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKAT 213 (520)
Q Consensus 143 ---~~lv~e~~~g~~L~~~l~~~------~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~ 213 (520)
.+++|||+++++|...+... ..+++..+..++.|++.||.|||+.|++||||||+||+++ +++.+||+
T Consensus 79 ~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~ 155 (273)
T cd05035 79 IPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLR---EDMTVCVA 155 (273)
T ss_pred CcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEEC---CCCeEEEC
Confidence 79999999999999887542 3589999999999999999999999999999999999994 56789999
Q ss_pred ecccccccCCCCcc---cccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCC
Q 010013 214 DFGLSVFFKPGDVF---KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDF 288 (520)
Q Consensus 214 Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~ 288 (520)
|||+++........ ....++..|+|||.+.+ .++.++|||||||++|+|++ |..||.+....+..+.+..+....
T Consensus 156 dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~ 235 (273)
T cd05035 156 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLK 235 (273)
T ss_pred CccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 99999876433211 11234668999998864 58899999999999999999 999998888777777776553321
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 289 SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 289 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
....++..+.+++.+||..||++|||+.+++++
T Consensus 236 ---~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 236 ---QPEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred ---CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 124678999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-39 Score=310.60 Aligned_cols=252 Identities=27% Similarity=0.409 Sum_probs=204.5
Q ss_pred cccceeecceeeccCCeEEEEEEEc-----CCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHK-----DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~ 139 (520)
..++|.+.+.||+|+||.||++.+. .++..+|+|.+.... .....+.+.+|+.+++++.+||||+++++++..
T Consensus 33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 110 (302)
T cd05055 33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA--HSSEREALMSELKIMSHLGNHENIVNLLGACTI 110 (302)
T ss_pred cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC--ChHHHHHHHHHHHHHHhccCCCCcceEEEEEec
Confidence 3467999999999999999999753 345679999876432 223456789999999999559999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccc
Q 010013 140 RHSVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (520)
Q Consensus 140 ~~~~~lv~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~ 217 (520)
.+..++||||+++++|.+++.... .+++..+..++.|++.||.|||++|++|+||||+||+++ .+..++|+|||+
T Consensus 111 ~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~~l~dfg~ 187 (302)
T cd05055 111 GGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLT---HGKIVKICDFGL 187 (302)
T ss_pred CCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEc---CCCeEEECCCcc
Confidence 999999999999999999987643 389999999999999999999999999999999999994 567799999999
Q ss_pred ccccCCCCc---ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCC
Q 010013 218 SVFFKPGDV---FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDP 292 (520)
Q Consensus 218 a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 292 (520)
+........ .....+++.|+|||.+. +.++.++||||+||++|++++ |..||.................... .
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~--~ 265 (302)
T cd05055 188 ARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMA--Q 265 (302)
T ss_pred cccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCC--C
Confidence 986543221 11234567899999875 458899999999999999998 9999987665444433333222221 2
Q ss_pred CCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 293 ~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
....+..+.+++.+||..+|++|||+.++++
T Consensus 266 ~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 266 PEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred CCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 2356899999999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-39 Score=306.71 Aligned_cols=248 Identities=24% Similarity=0.385 Sum_probs=209.3
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
....|.+.+.||.|+||.||+|.++. +..+|+|++.... ......+.+|+.+++.++ ||||+++++++......+
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~ 78 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDD---LLKQQDFQKEVQALKRLR-HKHLISLFAVCSVGEPVY 78 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccc---hhhHHHHHHHHHHHhcCC-CcchhheeeeEecCCCeE
Confidence 34679999999999999999999988 7889999986432 223567889999999998 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 145 LIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
+||||+++++|.+++... ..+++..+..++.||+.||.|||++|++|+||+|+||+++ .++.+||+|||.+....
T Consensus 79 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~---~~~~~kl~d~g~~~~~~ 155 (261)
T cd05148 79 IITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVG---EDLVCKVADFGLARLIK 155 (261)
T ss_pred EEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEc---CCceEEEccccchhhcC
Confidence 999999999999998753 4589999999999999999999999999999999999994 56779999999998764
Q ss_pred CCCc-ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHH
Q 010013 223 PGDV-FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (520)
Q Consensus 223 ~~~~-~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (520)
.... .....++..|+|||.+. +.++.++||||||+++|+|++ |..||......+....+..+... + ....++..
T Consensus 156 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~ 232 (261)
T cd05148 156 EDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRM-P--CPAKCPQE 232 (261)
T ss_pred CccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcC-C--CCCCCCHH
Confidence 3221 12234567899999876 458889999999999999998 89999888877777776644221 1 12467899
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHc
Q 010013 300 AKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 300 ~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
+.+++.+||+.+|++|||+.++++
T Consensus 233 ~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 233 IYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred HHHHHHHHcCCCchhCcCHHHHHH
Confidence 999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=303.99 Aligned_cols=245 Identities=23% Similarity=0.402 Sum_probs=203.0
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.++|.+.+.||+|+||.||+|.+..+ ..+|+|.+..... ..+.+.+|+.+++++. ||||+++++.+. ....++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~----~~~~~~~E~~~l~~l~-~~~i~~~~~~~~-~~~~~l 77 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQLYAVVS-EEPIYI 77 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc----CHHHHHHHHHHHHhCC-CCCcceEEEEEC-CCCcEE
Confidence 36799999999999999999988765 4699999864322 2357889999999998 999999999875 456889
Q ss_pred EEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 146 IMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
||||+++++|.+++... ..+++..+..++.|++.||.|||+.|++|+||||+||+++ +++.++|+|||.+.....
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~---~~~~~~L~dfg~~~~~~~ 154 (262)
T cd05071 78 VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIED 154 (262)
T ss_pred EEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEc---CCCcEEeccCCceeeccc
Confidence 99999999999999763 3589999999999999999999999999999999999994 567799999999986643
Q ss_pred CCcc--cccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHH
Q 010013 224 GDVF--KDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (520)
Q Consensus 224 ~~~~--~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (520)
.... ....++..|+|||... +.++.++||||||+++|++++ |..||.+.........+...... + ....++..
T Consensus 155 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~ 231 (262)
T cd05071 155 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-P--CPPECPES 231 (262)
T ss_pred cccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCC-C--CccccCHH
Confidence 3211 1234567899999875 458899999999999999999 88999888777776666544321 1 12467899
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHc
Q 010013 300 AKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 300 ~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
+.+++.+||+.+|++|||+.++++
T Consensus 232 l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 232 LHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred HHHHHHHHccCCcccCCCHHHHHH
Confidence 999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=302.49 Aligned_cols=241 Identities=23% Similarity=0.357 Sum_probs=200.6
Q ss_pred ceeeccCCeEEEEEEEcCCC---cEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEec
Q 010013 73 RELGRGQFGVTYLVTHKDTK---QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDL 149 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~~~---~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~ 149 (520)
+.||+|+||.||+|.+..++ ..+|+|.+...... ...+.+.+|+.+++++. ||||+++++++. ...+++||||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~-~~~~~~v~e~ 76 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQLD-HPCIVRLIGVCK-GEPLMLVMEL 76 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhcC-CCCeeeEEEEEc-CCceEEEEEe
Confidence 47999999999999876554 78999998754432 34567889999999998 999999999876 4568999999
Q ss_pred cCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCcc-c
Q 010013 150 CAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF-K 228 (520)
Q Consensus 150 ~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~-~ 228 (520)
+++++|.+++.....+++..+..++.|++.||.|||+.|++|+||||+||+++ .++.+||+|||++......... .
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~---~~~~~kl~df~~~~~~~~~~~~~~ 153 (257)
T cd05060 77 APLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLV---NRHQAKISDFGMSRALGAGSDYYR 153 (257)
T ss_pred CCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEc---CCCcEEeccccccceeecCCcccc
Confidence 99999999998888899999999999999999999999999999999999994 5678999999999876433211 1
Q ss_pred ---ccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHH
Q 010013 229 ---DLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (520)
Q Consensus 229 ---~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (520)
...++..|+|||.+.+ .++.++||||||+++|++++ |..||......+....+...... .....++..+.++
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~l 230 (257)
T cd05060 154 ATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERL---PRPEECPQEIYSI 230 (257)
T ss_pred cccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcC---CCCCCCCHHHHHH
Confidence 1123457999998764 58899999999999999998 99999888777776666554322 1224678999999
Q ss_pred HHHhcccCCCCCCCHHHHHc
Q 010013 304 VKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 304 i~~~l~~dp~~Rps~~~~l~ 323 (520)
+.+||..+|++|||+.++++
T Consensus 231 i~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 231 MLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred HHHHhcCChhhCcCHHHHHH
Confidence 99999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=310.78 Aligned_cols=252 Identities=24% Similarity=0.398 Sum_probs=208.1
Q ss_pred cccceeecceeeccCCeEEEEEEEcC-------CCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKD-------TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAY 137 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-------~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~ 137 (520)
..++|.+.+.||+|+||.||+|.+.. .+..+|+|.+.... .......+.+|+.+++.+.+||||+++++++
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 90 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 90 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc--chHHHHHHHHHHHHHHhhccCCCchheeEEE
Confidence 45779999999999999999997532 24578999875432 2334567889999999995599999999999
Q ss_pred EeCCeEEEEEeccCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEe
Q 010013 138 EDRHSVNLIMDLCAGGELFDRIIAK----------------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLF 201 (520)
Q Consensus 138 ~~~~~~~lv~e~~~g~~L~~~l~~~----------------~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll 201 (520)
......++||||+++++|.+++.+. ..+++..+..++.||+.||.|||++|++||||||+||++
T Consensus 91 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili 170 (304)
T cd05101 91 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLV 170 (304)
T ss_pred ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEE
Confidence 9999999999999999999998764 246788899999999999999999999999999999999
Q ss_pred ecCCCCCCeeEeecccccccCCCCc---ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHH
Q 010013 202 SSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQS 276 (520)
Q Consensus 202 ~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~ 276 (520)
+ .++.+||+|||++........ .....+++.|+|||++.+ .++.++||||||+++|++++ |..||.+....+
T Consensus 171 ~---~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~ 247 (304)
T cd05101 171 T---ENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 247 (304)
T ss_pred c---CCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH
Confidence 4 567899999999987643221 122345678999998864 48899999999999999998 889998888888
Q ss_pred HHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
....+....... ....++..+.+++.+||+.+|++|||+.++++.
T Consensus 248 ~~~~~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 248 LFKLLKEGHRMD---KPANCTNELYMMMRDCWHAIPSHRPTFKQLVED 292 (304)
T ss_pred HHHHHHcCCcCC---CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 777776554322 124678999999999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-39 Score=314.43 Aligned_cols=256 Identities=25% Similarity=0.415 Sum_probs=203.9
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC-----
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR----- 140 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~----- 140 (520)
.++|.+.+.||+|+||.||+|.++.+++.+|+|.+..... .......+.+|+.++++++ ||||+++++++...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~ 84 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNE-KDGFPITALREIKILKKLK-HPNVVPLIDMAVERPDKSK 84 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccC-CCCcchhHHHHHHHHHhcC-CCCccchhhheeccccccc
Confidence 5789999999999999999999999999999998864332 1122345678999999998 99999999877443
Q ss_pred ---CeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecc
Q 010013 141 ---HSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (520)
Q Consensus 141 ---~~~~lv~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg 216 (520)
..+++||||+.+ +|...+.. ...+++..+..++.||+.||.|||++|++|+||||+||++ +.++.++|+|||
T Consensus 85 ~~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg 160 (311)
T cd07866 85 RKRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILI---DNQGILKIADFG 160 (311)
T ss_pred ccCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEECcCc
Confidence 357999999965 67666654 3479999999999999999999999999999999999999 456789999999
Q ss_pred cccccCCCCc------------ccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHH
Q 010013 217 LSVFFKPGDV------------FKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL 282 (520)
Q Consensus 217 ~a~~~~~~~~------------~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~ 282 (520)
++........ .....+++.|+|||.+.+ .++.++|||||||++|+|++|++||.+.........+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~ 240 (311)
T cd07866 161 LARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIF 240 (311)
T ss_pred cchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9876532211 122356888999998753 37889999999999999999999998877665555443
Q ss_pred cCCCCCCC--------------------------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 283 RGHIDFSS--------------------------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 283 ~~~~~~~~--------------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
........ ..+..+++.+.++|.+||..+|++|||+.++++||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 241 KLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred HHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 21110000 0112345788999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-39 Score=310.21 Aligned_cols=253 Identities=32% Similarity=0.552 Sum_probs=208.9
Q ss_pred eeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 010013 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMD 148 (520)
Q Consensus 69 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e 148 (520)
|.+.+.||+|++|.||+|.+..+++.+++|.+..... .......+.+|+.+++++. ||||+++++++.++...++|+|
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~e 78 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFE-SEGIPKTALREIKLLKELN-HPNIIKLLDVFRHKGDLYLVFE 78 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccc-cchhHHHHHHHHHHHHHhc-CCCcchHHHhhccCCCEEEEEe
Confidence 5677899999999999999998999999999865432 2234567889999999998 9999999999999999999999
Q ss_pred ccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC-c
Q 010013 149 LCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD-V 226 (520)
Q Consensus 149 ~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-~ 226 (520)
|+++ +|.+.+... ..+++..+..++.|++.||.|||+.|++|+||||+||+++ .++.++|+|||.+....... .
T Consensus 79 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~---~~~~~~l~df~~~~~~~~~~~~ 154 (283)
T cd05118 79 FMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLIN---TEGVLKLADFGLARSFGSPVRP 154 (283)
T ss_pred ccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEEC---CCCcEEEeeeeeeEecCCCccc
Confidence 9975 888877663 5799999999999999999999999999999999999994 56779999999998765443 2
Q ss_pred ccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCC-----------------
Q 010013 227 FKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID----------------- 287 (520)
Q Consensus 227 ~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~----------------- 287 (520)
.....++..|+|||.+.+ .++.++||||||+++|++++|+.||......+....+......
T Consensus 155 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd05118 155 YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYK 234 (283)
T ss_pred ccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhh
Confidence 334567889999998753 4788999999999999999999999877765444333221100
Q ss_pred --CC-------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 288 --FS-------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 288 --~~-------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
++ ...++.++..+.++|.+||.+||.+||++.++++||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 235 FSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred hhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 00 01123568899999999999999999999999999997
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=312.69 Aligned_cols=265 Identities=32% Similarity=0.521 Sum_probs=212.0
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe-CC
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED-RH 141 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~-~~ 141 (520)
..+.++|.+.+.||.|+||.||+|.+..+++.+|+|++.+.. ......+.+.+|+.+++++. ||||+++++++.. ..
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~ 83 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPF-STPVLAKRTYRELKLLKHLR-HENIISLSDIFISPLE 83 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccc-cccchhHHHHHHHHHHHhcC-CCCeeeEeeeEecCCC
Confidence 346788999999999999999999999999999999886432 22334567889999999998 9999999998865 56
Q ss_pred eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 142 SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
..++|+||+ +++|.+.+. ..++++..+..++.||+.||.|||+.|++||||+|+||++ +.++.++|+|||.+...
T Consensus 84 ~~~lv~e~~-~~~L~~~~~-~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili---~~~~~~~l~dfg~~~~~ 158 (328)
T cd07856 84 DIYFVTELL-GTDLHRLLT-SRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILI---NENCDLKICDFGLARIQ 158 (328)
T ss_pred cEEEEeehh-ccCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeE---CCCCCEEeCcccccccc
Confidence 789999998 568877665 4568899999999999999999999999999999999999 45678999999998864
Q ss_pred CCCCcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC---------------
Q 010013 222 KPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG--------------- 284 (520)
Q Consensus 222 ~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~--------------- 284 (520)
.. ......+++.|+|||.+.+ .++.++||||||+++|+|++|..||...........+.+.
T Consensus 159 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (328)
T cd07856 159 DP--QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSE 236 (328)
T ss_pred CC--CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccch
Confidence 32 2234567889999998754 4789999999999999999999999776543222111110
Q ss_pred ---------C--CCCC-CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCCCCCC
Q 010013 285 ---------H--IDFS-SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDK 336 (520)
Q Consensus 285 ---------~--~~~~-~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~~~~~ 336 (520)
. ...+ ....+.++..+.++|.+||..+|++|||+.+++.||||+........
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~~~~ 300 (328)
T cd07856 237 NTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDPTDE 300 (328)
T ss_pred hhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCCccc
Confidence 0 0000 01124578899999999999999999999999999999866555433
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=306.50 Aligned_cols=247 Identities=22% Similarity=0.320 Sum_probs=203.1
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCc----EEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQ----QFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~----~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~ 142 (520)
.+|.+.+.||+|+||+||+|.+..++. .||+|.+.... .....+.+.+|+.++..+. ||||+++++++.. ..
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~-~~ 82 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT--SPKANKEILDEAYVMAGVG-SPYVCRLLGICLT-ST 82 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC--CHHHHHHHHHHHHHHHhcC-CCCCceEEEEEcC-CC
Confidence 568999999999999999999877765 47899875432 2334567889999999998 9999999999875 45
Q ss_pred EEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 143 VNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
.++++||+++|+|.+.+... +.+++..+..++.|++.||.|||++|++||||||+|||+. +++.+||+|||+++..
T Consensus 83 ~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~---~~~~~kL~dfG~~~~~ 159 (279)
T cd05109 83 VQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVK---SPNHVKITDFGLARLL 159 (279)
T ss_pred cEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEc---CCCcEEECCCCceeec
Confidence 78999999999999998764 5699999999999999999999999999999999999994 4667999999999876
Q ss_pred CCCCcc---cccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCC
Q 010013 222 KPGDVF---KDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (520)
Q Consensus 222 ~~~~~~---~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (520)
...... ....+++.|+|||.+. ..++.++|||||||++|+|++ |..||...........+..+.... ....+
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~ 236 (279)
T cd05109 160 DIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLP---QPPIC 236 (279)
T ss_pred ccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCC---CCccC
Confidence 432211 1223467899999875 458899999999999999998 999998777766666555443221 12467
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 297 SSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 297 ~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
+..+.+++.+||..||++||++.++++
T Consensus 237 ~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 237 TIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 899999999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-39 Score=317.77 Aligned_cols=260 Identities=30% Similarity=0.487 Sum_probs=208.1
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC---
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--- 140 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~--- 140 (520)
.+..+|.+.+.||+|+||.||+|.+..+|+.+|+|++.... ........+.+|+.+++++. ||||+++++++...
T Consensus 12 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~ 89 (342)
T cd07879 12 ELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPF-QSEIFAKRAYRELTLLKHMQ-HENVIGLLDVFTSAVSG 89 (342)
T ss_pred ccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCcc-ccccchhHHHHHHHHHHhcC-CCCccchhheecccccC
Confidence 34578999999999999999999999899999999986432 22233456789999999998 99999999988654
Q ss_pred ---CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccc
Q 010013 141 ---HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (520)
Q Consensus 141 ---~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~ 217 (520)
..+++|+||+.. +|...+ ...+++..+..++.|++.||.|||+.|++||||||+||+++ .++.++|+|||+
T Consensus 90 ~~~~~~~lv~e~~~~-~l~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~---~~~~~kL~dfg~ 163 (342)
T cd07879 90 DEFQDFYLVMPYMQT-DLQKIM--GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVN---EDCELKILDFGL 163 (342)
T ss_pred CCCceEEEEeccccc-CHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEeeCCC
Confidence 346899999954 666544 34689999999999999999999999999999999999994 567899999999
Q ss_pred ccccCCCCcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCC----------
Q 010013 218 SVFFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH---------- 285 (520)
Q Consensus 218 a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~---------- 285 (520)
+..... ......+++.|+|||.+.+ .++.++|||||||++|+|++|+.||.+.........+....
T Consensus 164 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (342)
T cd07879 164 ARHADA--EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQK 241 (342)
T ss_pred CcCCCC--CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 886532 2234567889999998754 47889999999999999999999998876544443332210
Q ss_pred -------------CCCCC----CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCCC
Q 010013 286 -------------IDFSS----DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDA 333 (520)
Q Consensus 286 -------------~~~~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~~ 333 (520)
...+. ..++..+..+.++|.+||+.||++|||+.+++.||||+...+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~ 306 (342)
T cd07879 242 LEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDA 306 (342)
T ss_pred hcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccc
Confidence 00000 0124567889999999999999999999999999999865543
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=306.61 Aligned_cols=247 Identities=22% Similarity=0.399 Sum_probs=205.2
Q ss_pred cceeecceeeccCCeEEEEEEEc-----CCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHK-----DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~ 141 (520)
.+|.+.++||+|+||.||++... .++..+|+|.+... .....+.+.+|+++++.+. ||||+++++++....
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~ 80 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTVLQ-HQHIVRFYGVCTEGR 80 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC---CHHHHHHHHHHHHHHhcCC-CCCCceEEEEEecCC
Confidence 46788899999999999999743 34668899987532 2344567899999999997 999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCC
Q 010013 142 SVNLIMDLCAGGELFDRIIAKG---------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAE 206 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~l~~~~---------------~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~ 206 (520)
..+++|||+++++|.+++...+ .+++..+..++.||+.||.|||+.|++||||||+||+++ +
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~---~ 157 (280)
T cd05092 81 PLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVG---Q 157 (280)
T ss_pred ceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEc---C
Confidence 9999999999999999987643 478999999999999999999999999999999999994 5
Q ss_pred CCCeeEeecccccccCCCCc---ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHH
Q 010013 207 DSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAI 281 (520)
Q Consensus 207 ~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~ 281 (520)
++.+||+|||++........ .....+++.|+|||.+. ..++.++|||||||++|+|++ |.+||...........+
T Consensus 158 ~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~ 237 (280)
T cd05092 158 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECI 237 (280)
T ss_pred CCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHH
Confidence 67899999999876543221 11233567899999876 458899999999999999998 99999887777777666
Q ss_pred HcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 282 LRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
..+.... ....+++.+.+++.+||+.||++||++.++++
T Consensus 238 ~~~~~~~---~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 238 TQGRELE---RPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred HcCccCC---CCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 6553321 12467899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=305.39 Aligned_cols=247 Identities=23% Similarity=0.363 Sum_probs=201.3
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcE----EEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQ----FACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~----~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~ 142 (520)
++|++.+.||+|+||.||+|.+..++.. +++|.+... ........+..|+.++.++. ||||+++++++. ...
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~l~~l~-h~~iv~~~~~~~-~~~ 82 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR--SGRQTFQEITDHMLAMGSLD-HAYIVRLLGICP-GAS 82 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc--cchHHHHHHHHHHHHHhcCC-CCCcceEEEEEC-CCc
Confidence 5688999999999999999999877764 666665321 12233466778888899998 999999999875 456
Q ss_pred EEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 143 VNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
.++++||+++|+|.+++... +.+++..+..++.||+.||.|||++|++||||||+||++ +.++.+||+|||.++..
T Consensus 83 ~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili---~~~~~~kl~Dfg~~~~~ 159 (279)
T cd05111 83 LQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILL---KSDSIVQIADFGVADLL 159 (279)
T ss_pred cEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEE---cCCCcEEEcCCccceec
Confidence 78899999999999999764 568999999999999999999999999999999999999 45678999999999865
Q ss_pred CCCC---cccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCC
Q 010013 222 KPGD---VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (520)
Q Consensus 222 ~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (520)
.... ......++..|+|||.+. +.++.++|||||||++|++++ |..||.+.......+.+..+...... ..+
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~ 236 (279)
T cd05111 160 YPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERLAQP---QIC 236 (279)
T ss_pred cCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCC---CCC
Confidence 4332 122345677899999885 458999999999999999998 99999888776666655544332221 346
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 297 SSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 297 ~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
+..+..++.+||..+|++|||+.++++
T Consensus 237 ~~~~~~li~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 237 TIDVYMVMVKCWMIDENVRPTFKELAN 263 (279)
T ss_pred CHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 788999999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=301.23 Aligned_cols=240 Identities=24% Similarity=0.359 Sum_probs=197.3
Q ss_pred eeeccCCeEEEEEEEc--CCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccC
Q 010013 74 ELGRGQFGVTYLVTHK--DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCA 151 (520)
Q Consensus 74 ~lg~G~~g~Vy~~~~~--~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~ 151 (520)
.||+|+||.||+|.++ .++..+|+|++.... .....+.+.+|+.+++++. ||||+++++++. ....++||||++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~ii~~~~~~~-~~~~~lv~e~~~ 77 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN--EKSVRDEMMREAEIMHQLD-NPYIVRMIGVCE-AEALMLVMEMAS 77 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc--ChHHHHHHHHHHHHHHhcC-CCCeEEEEEEEc-CCCeEEEEEeCC
Confidence 4899999999999875 445679999886432 2334567899999999998 999999999886 457899999999
Q ss_pred CCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCcc---
Q 010013 152 GGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF--- 227 (520)
Q Consensus 152 g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~--- 227 (520)
+++|.+++.. ...+++..+..++.||+.||.|||++|++||||||+||+++ .+..+||+|||++.........
T Consensus 78 ~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~---~~~~~kl~dfg~~~~~~~~~~~~~~ 154 (257)
T cd05115 78 GGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLV---NQHYAKISDFGLSKALGADDSYYKA 154 (257)
T ss_pred CCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEc---CCCcEEeccCCccccccCCccceec
Confidence 9999998875 45789999999999999999999999999999999999994 5677999999999865433211
Q ss_pred -cccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Q 010013 228 -KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (520)
Q Consensus 228 -~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (520)
....+++.|+|||.+.. .++.++|||||||++|++++ |..||......+....+..+.... ....+++++.+++
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li 231 (257)
T cd05115 155 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRLD---CPAECPPEMYALM 231 (257)
T ss_pred cCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCC---CCCCCCHHHHHHH
Confidence 11223568999998764 58889999999999999996 999999888877777666554322 2246789999999
Q ss_pred HHhcccCCCCCCCHHHHHc
Q 010013 305 KKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 305 ~~~l~~dp~~Rps~~~~l~ 323 (520)
.+||..+|++||++.++++
T Consensus 232 ~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 232 KDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred HHHcCCChhhCcCHHHHHH
Confidence 9999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-39 Score=309.37 Aligned_cols=253 Identities=31% Similarity=0.529 Sum_probs=209.7
Q ss_pred eeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 010013 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMD 148 (520)
Q Consensus 69 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e 148 (520)
|.+.+.||+|++|.||+|.+..+++.+|+|.+.... ......+.+..|+.+++++. ||||+++++++.+....++|||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~~v~e 78 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN-EEEGIPSTALREISLLKELK-HPNIVKLLDVIHTERKLYLVFE 78 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEecccc-ccccccHHHHHHHHHHHhcC-CCCHHHHHhhhhcCCceEEEec
Confidence 567789999999999999999999999999987543 22334467788999999998 9999999999999999999999
Q ss_pred ccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC-c
Q 010013 149 LCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD-V 226 (520)
Q Consensus 149 ~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-~ 226 (520)
|++ ++|.+++.+. ..+++..+..++.|++.||.+||+.||+||||+|+||+++ +++.++|+|||.+....... .
T Consensus 79 ~~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~---~~~~~~l~d~g~~~~~~~~~~~ 154 (282)
T cd07829 79 YCD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILIN---RDGVLKLADFGLARAFGIPLRT 154 (282)
T ss_pred CcC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEc---CCCCEEEecCCcccccCCCccc
Confidence 997 5899998876 5799999999999999999999999999999999999994 57789999999988764332 2
Q ss_pred ccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC------------------
Q 010013 227 FKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI------------------ 286 (520)
Q Consensus 227 ~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~------------------ 286 (520)
.....++..|+|||.+.+ .++.++||||||+++|++++|..||...........+.....
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (282)
T cd07829 155 YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKP 234 (282)
T ss_pred cCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccc
Confidence 334456788999998753 578899999999999999999999988776554444322100
Q ss_pred CCC-------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 287 DFS-------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 287 ~~~-------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
.++ ...++.++..+.++|.+||..+|++||++.++++||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 235 TFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred cccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 000 01123557889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=303.63 Aligned_cols=248 Identities=22% Similarity=0.390 Sum_probs=206.3
Q ss_pred cceeecceeeccCCeEEEEEEEcCCC---cEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTK---QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~---~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
.+|++.+.||+|+||.||+|.++.++ ..+|+|.+.... .....+.+.+|+.+++++. ||||+++++++..++..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 80 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY--TEKQRRDFLSEASIMGQFD-HPNIIHLEGVVTKSKPV 80 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC--CHHHHHHHHHHHHHHHhCC-CCCcceEEEEEecCCcc
Confidence 56899999999999999999986544 378999885432 2234567899999999998 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 144 NLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
++||||+++++|.+++... +.+++..+..++.|++.||.|||++|++||||||+||+++ .++.++|+|||++....
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~---~~~~~~l~dfg~~~~~~ 157 (267)
T cd05066 81 MIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVN---SNLVCKVSDFGLSRVLE 157 (267)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEEC---CCCeEEeCCCCcccccc
Confidence 9999999999999998765 4689999999999999999999999999999999999994 56779999999998764
Q ss_pred CCCcc----cccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCC
Q 010013 223 PGDVF----KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (520)
Q Consensus 223 ~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (520)
..... ....++..|+|||.+.+ .++.++||||||+++|++++ |..||......+....+..... .+ ....+
T Consensus 158 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~-~~--~~~~~ 234 (267)
T cd05066 158 DDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYR-LP--APMDC 234 (267)
T ss_pred cccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCc-CC--CCCCC
Confidence 32211 11223567999999864 58999999999999999886 9999988877777776665422 22 22467
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 297 SSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 297 ~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
++.+.+++.+||+.+|++|||+.++++
T Consensus 235 ~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 235 PAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred CHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-39 Score=310.64 Aligned_cols=256 Identities=31% Similarity=0.546 Sum_probs=209.3
Q ss_pred ceeecceeeccCCeEEEEEEEc---CCCcEEEEEEecccccCC-cccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHK---DTKQQFACKSISSRKLIN-RDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~---~~~~~~avK~~~~~~~~~-~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
.|.+.+.||+|++|.||++.+. .++..+|+|.+.+..... ....+.+.+|+.++.++.+||||+++++.+..+...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 3788999999999999999864 357889999986543222 223466889999999997799999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
++||||+.+++|.+.+.....+++..+..++.|++.||.|||+.|++||||+|+||+++ .++.++|+|||++.....
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~ 157 (288)
T cd05583 81 HLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLD---SEGHVVLTDFGLSKEFLA 157 (288)
T ss_pred EEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC---CCCCEEEEECcccccccc
Confidence 99999999999999998877899999999999999999999999999999999999994 567799999999877543
Q ss_pred CCc--ccccccCCCccCchhhccc---CCCcchhHHHHHHHHHHhhCCCCCCCCC----HHHHHHHHHcCCCCCCCCCCC
Q 010013 224 GDV--FKDLVGSAYYVAPEVLRRN---YGAEADIWSAGVILYILLSGVPPFWGET----EQSIFDAILRGHIDFSSDPWP 294 (520)
Q Consensus 224 ~~~--~~~~~gt~~y~aPE~~~~~---~~~~~Dv~slG~~l~~ll~g~~pf~~~~----~~~~~~~~~~~~~~~~~~~~~ 294 (520)
... .....|++.|+|||.+.+. .+.++||||||+++|+|++|..||.... ..+....+....... ..
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~ 233 (288)
T cd05583 158 EEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPPF----PK 233 (288)
T ss_pred ccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCCCC----Cc
Confidence 321 1234688999999987543 6789999999999999999999995432 233333333333222 23
Q ss_pred CCCHHHHHHHHHhcccCCCCCCC---HHHHHcCCccccC
Q 010013 295 NISSSAKDIVKKMLHADPKERLS---AAEVLNHPWMRVD 330 (520)
Q Consensus 295 ~~~~~~~~li~~~l~~dp~~Rps---~~~~l~~~~~~~~ 330 (520)
.++..+.+++.+||+.+|++||| +.++|+||||+..
T Consensus 234 ~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~ 272 (288)
T cd05583 234 TMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGI 272 (288)
T ss_pred ccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccC
Confidence 57889999999999999999998 5677999999754
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=313.47 Aligned_cols=252 Identities=25% Similarity=0.402 Sum_probs=206.4
Q ss_pred cccceeecceeeccCCeEEEEEEEcCC-------CcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDT-------KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAY 137 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~-------~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~ 137 (520)
...+|.+++.||+|+||.||+|.+... +..+|+|.+... ......+.+.+|+.+++++.+||||+++++++
T Consensus 10 ~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 87 (334)
T cd05100 10 SRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD--ATDKDLSDLVSEMEMMKMIGKHKNIINLLGAC 87 (334)
T ss_pred CHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc--cCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEE
Confidence 446799999999999999999986432 236899987532 12334577889999999995599999999999
Q ss_pred EeCCeEEEEEeccCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEe
Q 010013 138 EDRHSVNLIMDLCAGGELFDRIIAKG----------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLF 201 (520)
Q Consensus 138 ~~~~~~~lv~e~~~g~~L~~~l~~~~----------------~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll 201 (520)
...+..+++|||+++++|.+++.+.. .++...+..++.||+.||.|||++|++||||||+||++
T Consensus 88 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill 167 (334)
T cd05100 88 TQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLV 167 (334)
T ss_pred ccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEE
Confidence 99999999999999999999987532 37788899999999999999999999999999999999
Q ss_pred ecCCCCCCeeEeecccccccCCCCc---ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHH
Q 010013 202 SSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQS 276 (520)
Q Consensus 202 ~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~ 276 (520)
+ .++.+||+|||+++....... .....++..|+|||++.+ .++.++||||||+++|+|++ |..||.+....+
T Consensus 168 ~---~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~ 244 (334)
T cd05100 168 T---EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 244 (334)
T ss_pred c---CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence 4 567799999999986543221 112234567999998864 58899999999999999998 899999888877
Q ss_pred HHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
....+....... ....++..+.+++.+||+.+|++|||+.+++++
T Consensus 245 ~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~ 289 (334)
T cd05100 245 LFKLLKEGHRMD---KPANCTHELYMIMRECWHAVPSQRPTFKQLVED 289 (334)
T ss_pred HHHHHHcCCCCC---CCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 777766543221 124668899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=315.92 Aligned_cols=262 Identities=27% Similarity=0.443 Sum_probs=209.1
Q ss_pred ccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC-
Q 010013 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR- 140 (520)
Q Consensus 62 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~- 140 (520)
...+.++|.+.+.||+|+||.||+|.+..+++.||+|++.... ......+.+.+|+.++++++ ||||+++++++...
T Consensus 12 ~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~Ei~~l~~l~-h~~iv~~~~~~~~~~ 89 (345)
T cd07877 12 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-QSIIHAKRTYRELRLLKHMK-HENVIGLLDVFTPAR 89 (345)
T ss_pred HhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcc-hhhHHHHHHHHHHHHHHHcC-CCcccceeeeeeecc
Confidence 3456789999999999999999999999899999999986432 12223466788999999998 99999999987643
Q ss_pred -----CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeec
Q 010013 141 -----HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDF 215 (520)
Q Consensus 141 -----~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Df 215 (520)
...+++++++ |++|.+.+.. ..+++..+..++.|++.||.|||+.||+||||||+||+++ .++.+||+||
T Consensus 90 ~~~~~~~~~lv~~~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~---~~~~~kl~df 164 (345)
T cd07877 90 SLEEFNDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDF 164 (345)
T ss_pred cccccccEEEEehhc-ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEc---CCCCEEEecc
Confidence 3477888877 7888776654 4699999999999999999999999999999999999994 5677999999
Q ss_pred ccccccCCCCcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC-------
Q 010013 216 GLSVFFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI------- 286 (520)
Q Consensus 216 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~------- 286 (520)
|++..... ......+++.|+|||.+.+ .++.++|||||||++|+|++|+.||...........+.....
T Consensus 165 g~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 242 (345)
T cd07877 165 GLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 242 (345)
T ss_pred cccccccc--cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 99886532 2234568899999998754 478899999999999999999999977665443333221110
Q ss_pred ----------------CCCC----CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 287 ----------------DFSS----DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 287 ----------------~~~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
..+. ..+...++.+.++|.+||+.||++|||+.++++||||+....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~ 308 (345)
T cd07877 243 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 308 (345)
T ss_pred hhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCC
Confidence 0000 111245788999999999999999999999999999985443
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-38 Score=331.53 Aligned_cols=256 Identities=29% Similarity=0.478 Sum_probs=205.1
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEE------
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE------ 138 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~------ 138 (520)
...+|...+.||+||||.||+++++-+|+.||||+|.... .......+.+|+..|.+|+ |||||+++..+.
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArLn-HpNVVRYysAWVEs~~~~ 553 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARLN-HPNVVRYYSAWVESTAEL 553 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhcC-CcceeeeehhhhccCCcc
Confidence 3456778899999999999999999999999999997643 3445677899999999999 999999985320
Q ss_pred ------------------------------------------------------------------------eC------
Q 010013 139 ------------------------------------------------------------------------DR------ 140 (520)
Q Consensus 139 ------------------------------------------------------------------------~~------ 140 (520)
++
T Consensus 554 ~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~t 633 (1351)
T KOG1035|consen 554 TVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNT 633 (1351)
T ss_pred ccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccc
Confidence 00
Q ss_pred -----------------------------------CeEEEEEeccCCCchHHHHHhcCCC-CHHHHHHHHHHHHHHHHHH
Q 010013 141 -----------------------------------HSVNLIMDLCAGGELFDRIIAKGHY-SERAAANLCRQMVTVVHYC 184 (520)
Q Consensus 141 -----------------------------------~~~~lv~e~~~g~~L~~~l~~~~~l-~~~~~~~i~~qi~~~l~~L 184 (520)
..+||-||||+..+|.+.+.++... ....+++++++|+.||.|+
T Consensus 634 S~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYI 713 (1351)
T KOG1035|consen 634 SDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYI 713 (1351)
T ss_pred cccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHH
Confidence 2467889999887777766665444 4678899999999999999
Q ss_pred HHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC------------------C-CCcccccccCCCccCchhhcc-
Q 010013 185 HSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK------------------P-GDVFKDLVGSAYYVAPEVLRR- 244 (520)
Q Consensus 185 H~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~------------------~-~~~~~~~~gt~~y~aPE~~~~- 244 (520)
|+.|||||||||.||+++ ....|||+|||+|.... . ....+..+||..|+|||++.+
T Consensus 714 H~~giIHRDLKP~NIFLd---~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~ 790 (1351)
T KOG1035|consen 714 HDQGIIHRDLKPRNIFLD---SRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDT 790 (1351)
T ss_pred HhCceeeccCCcceeEEc---CCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccc
Confidence 999999999999999994 67779999999998721 0 113456789999999999863
Q ss_pred ---cCCCcchhHHHHHHHHHHhhCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHH
Q 010013 245 ---NYGAEADIWSAGVILYILLSGVPPFWGETEQ-SIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAE 320 (520)
Q Consensus 245 ---~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ 320 (520)
.|+.|+|+|||||+++||+. ||....+. .++..+..+..+.+...+..--+.-..+|+.||+.||++||||.|
T Consensus 791 ~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~e 867 (1351)
T KOG1035|consen 791 SSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATE 867 (1351)
T ss_pred ccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHH
Confidence 48999999999999999985 67665543 345555666665553333333456778999999999999999999
Q ss_pred HHcCCcccc
Q 010013 321 VLNHPWMRV 329 (520)
Q Consensus 321 ~l~~~~~~~ 329 (520)
+|++.||-.
T Consensus 868 LL~s~llpp 876 (1351)
T KOG1035|consen 868 LLNSELLPP 876 (1351)
T ss_pred HhhccCCCc
Confidence 999999974
|
|
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=308.40 Aligned_cols=252 Identities=21% Similarity=0.317 Sum_probs=201.9
Q ss_pred ccceeecceeeccCCeEEEEEEEcCC--------------CcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCee
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDT--------------KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~--------------~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv 131 (520)
.++|.+.+.||+|+||.||+|.+..+ ...||+|.+.... .....+.+.+|++++++++ ||||+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~ei~~l~~l~-h~~i~ 80 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV--TKTARNDFLKEIKIMSRLK-NPNII 80 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC--CHHHHHHHHHHHHHHHhCC-CCCcC
Confidence 36799999999999999999987543 2358999886432 2334567899999999998 99999
Q ss_pred EEEEEEEeCCeEEEEEeccCCCchHHHHHhcC------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcE
Q 010013 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKG------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENF 199 (520)
Q Consensus 132 ~l~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~------------~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NI 199 (520)
++++++......++||||+++++|.+++.... .+++..+..++.|++.||.|||++|++|+||||+||
T Consensus 81 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Ni 160 (295)
T cd05097 81 RLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNC 160 (295)
T ss_pred eEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhE
Confidence 99999999999999999999999999886532 367889999999999999999999999999999999
Q ss_pred EeecCCCCCCeeEeecccccccCCCCc---ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh--CCCCCCCCC
Q 010013 200 LFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS--GVPPFWGET 273 (520)
Q Consensus 200 ll~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~--g~~pf~~~~ 273 (520)
+++ .++.+||+|||++........ .....++..|+|||.+. +.++.++|||||||++|+|++ |..||....
T Consensus 161 ll~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~ 237 (295)
T cd05097 161 LVG---NHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLS 237 (295)
T ss_pred EEc---CCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccC
Confidence 994 466799999999876543221 12234567899999875 458999999999999999988 678888776
Q ss_pred HHHHHHHHHcC----CCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 274 EQSIFDAILRG----HIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 274 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.......+... .........+.+++.+.+++.+||..+|++|||+.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 238 DEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred hHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 65555443221 111111122457899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-38 Score=300.23 Aligned_cols=242 Identities=23% Similarity=0.392 Sum_probs=206.1
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
+.|.+.+.||.|+||.||+|... |+.+|+|.+..... ..+.+.+|+.+++++. |+||+++++++.+....++|
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v 78 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST----AAQAFLAEASVMTTLR-HPNLVQLLGVVLQGNPLYIV 78 (256)
T ss_pred hhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh----HHHHHHHHHHHHHhcC-CcceeeeEEEEcCCCCeEEE
Confidence 56889999999999999999875 68899999864321 4577899999999998 99999999999989999999
Q ss_pred EeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 147 MDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
|||+++++|.+++.... .+++..+..++.|++.||.|||++|++|+||||+||+++ .++.++|+|||.+......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~---~~~~~~l~d~g~~~~~~~~ 155 (256)
T cd05039 79 TEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVS---EDLVAKVSDFGLAKEASQG 155 (256)
T ss_pred EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEe---CCCCEEEcccccccccccc
Confidence 99999999999987765 699999999999999999999999999999999999994 5678999999999876322
Q ss_pred CcccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHH
Q 010013 225 DVFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (520)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (520)
. ....++..|+|||.+. +.++.++||||||+++|++++ |..||...........+...... .....+++.+.+
T Consensus 156 ~--~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 230 (256)
T cd05039 156 Q--DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRM---EAPEGCPPEVYK 230 (256)
T ss_pred c--ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCCC---CCccCCCHHHHH
Confidence 2 2234456799999875 458889999999999999997 99999888877776666544221 122467899999
Q ss_pred HHHHhcccCCCCCCCHHHHHc
Q 010013 303 IVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 303 li~~~l~~dp~~Rps~~~~l~ 323 (520)
+|.+||..+|++|||+.++++
T Consensus 231 li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 231 VMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred HHHHHhccChhhCcCHHHHHH
Confidence 999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=303.30 Aligned_cols=248 Identities=23% Similarity=0.413 Sum_probs=206.1
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCc---EEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQ---QFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~---~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
..|++.+.||+|+||.||+|.++.++. .||+|.+... ........+..|+.+++++. ||||+++++++..+...
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~ 80 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSG--YTEKQRRDFLSEASIMGQFD-HPNIIHLEGVVTKSRPV 80 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCC--CCHHHHHHHHHHHHHHHhCC-CcCcceEEEEECCCCce
Confidence 458899999999999999999887654 5999988643 23344577999999999998 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 144 NLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
++||||+++++|.+++... +.+++..+..++.|++.||.|||++|++|+||||+||+++ .+..++|+|||++....
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~---~~~~~kl~dfg~~~~~~ 157 (269)
T cd05065 81 MIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVN---SNLVCKVSDFGLSRFLE 157 (269)
T ss_pred EEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEc---CCCcEEECCCccccccc
Confidence 9999999999999988764 5689999999999999999999999999999999999994 56789999999987654
Q ss_pred CCCcc---cccc---cCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCC
Q 010013 223 PGDVF---KDLV---GSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWP 294 (520)
Q Consensus 223 ~~~~~---~~~~---gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (520)
..... .... .+..|+|||.+. +.++.++|||||||++|++++ |..||......+....+.... ..+ ...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~-~~~--~~~ 234 (269)
T cd05065 158 DDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDY-RLP--PPM 234 (269)
T ss_pred cCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCC-cCC--Ccc
Confidence 32211 1111 134799999886 458899999999999999886 999999888777777665432 222 224
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 295 NISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 295 ~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.++..+.+++.+||..+|++||++.+++.
T Consensus 235 ~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 235 DCPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred cCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 67899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-38 Score=306.33 Aligned_cols=247 Identities=23% Similarity=0.372 Sum_probs=202.7
Q ss_pred ceeecceeeccCCeEEEEEEEcC-----CCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKD-----TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~ 142 (520)
+|.+.+.||+|+||.||+|.+.. ....+++|.+.... .....+.+.+|+.+++.+. ||||+++++.+...+.
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~ 77 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA--SSSELRDLLSEFNLLKQVN-HPHVIKLYGACSQDGP 77 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC--CHHHHHHHHHHHHHHhhCC-CCCEeeEEEEEecCCC
Confidence 47788999999999999998753 23568888875432 2233567889999999998 9999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhc------------------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCc
Q 010013 143 VNLIMDLCAGGELFDRIIAK------------------------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPEN 198 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~------------------------~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~N 198 (520)
.++++||+.+++|.+++... ..+++..+..++.|++.||.|||+.|++||||||+|
T Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~n 157 (290)
T cd05045 78 LLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARN 157 (290)
T ss_pred cEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhhe
Confidence 99999999999999987642 247889999999999999999999999999999999
Q ss_pred EEeecCCCCCCeeEeecccccccCCCCc---ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCC
Q 010013 199 FLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGET 273 (520)
Q Consensus 199 Ill~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~ 273 (520)
|++. +++.+||+|||++........ .....++..|+|||.+.+ .++.++||||||+++|+|++ |..||.+..
T Consensus 158 ill~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~ 234 (290)
T cd05045 158 VLVA---EGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA 234 (290)
T ss_pred EEEc---CCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 9994 567899999999886532221 122345678999998754 48899999999999999998 999998888
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 274 EQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.......+..... . .....++..+.+++.+||+.+|++||++.++++
T Consensus 235 ~~~~~~~~~~~~~-~--~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 235 PERLFNLLKTGYR-M--ERPENCSEEMYNLMLTCWKQEPDKRPTFADISK 281 (290)
T ss_pred HHHHHHHHhCCCC-C--CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 7777766554322 1 122467899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-38 Score=300.31 Aligned_cols=245 Identities=22% Similarity=0.390 Sum_probs=202.8
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.++|.+.+.||+|+||.||+|.+.. +..+|+|.+..... ..+.+.+|+.++++++ ||||+++++++. ....++
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~-~~~~~~k~~~~~~~----~~~~~~~E~~~l~~l~-~~~i~~~~~~~~-~~~~~l 77 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNG-NTKVAVKTLKPGTM----SPESFLEEAQIMKKLR-HDKLVQLYAVVS-EEPIYI 77 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecC-CceeEEEEecCCCC----CHHHHHHHHHHHHhcC-CCceEEEEeEEC-CCCcEE
Confidence 4679999999999999999998764 56799998865332 2356889999999998 999999999875 456889
Q ss_pred EEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 146 IMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
+|||+++++|.+++... ..+++..+..++.|++.||.|||+.|++|+||||+||+++ +++.++|+|||.+.....
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~---~~~~~~l~dfg~~~~~~~ 154 (260)
T cd05070 78 VTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVG---DGLVCKIADFGLARLIED 154 (260)
T ss_pred EEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEe---CCceEEeCCceeeeeccC
Confidence 99999999999988763 3589999999999999999999999999999999999995 466799999999987543
Q ss_pred CCcc--cccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHH
Q 010013 224 GDVF--KDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (520)
Q Consensus 224 ~~~~--~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (520)
.... ....++..|+|||.+. ..++.++||||||+++|+|++ |..||.+....+....+...... ......+..
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 231 (260)
T cd05070 155 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRM---PCPQDCPIS 231 (260)
T ss_pred cccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC---CCCCcCCHH
Confidence 2211 1223556799999875 458889999999999999999 89999888777777766554221 122467899
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHc
Q 010013 300 AKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 300 ~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
+.+++.+||.++|++|||+.++++
T Consensus 232 ~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 232 LHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred HHHHHHHHcccCcccCcCHHHHHH
Confidence 999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-38 Score=299.90 Aligned_cols=245 Identities=27% Similarity=0.464 Sum_probs=208.3
Q ss_pred eecceeeccCCeEEEEEEEcCCC----cEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 70 IFGRELGRGQFGVTYLVTHKDTK----QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 70 ~~~~~lg~G~~g~Vy~~~~~~~~----~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.+.+.||.|+||.||++.+...+ ..+|+|.+..... ....+.+..|+.+++.+. |+||+++++++.+.+..++
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~ 78 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD--EQQIEEFLREARIMRKLD-HPNIVKLLGVCTEEEPLMI 78 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC--hHHHHHHHHHHHHHHhcC-CCchheEEEEEcCCCeeEE
Confidence 56789999999999999998766 8899999864422 225678899999999996 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 146 IMDLCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~~--l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
+|||+++++|.+++..... +++..+..++.|++.||.+||+.|++|+||||+||+++ .++.++|+|||++.....
T Consensus 79 i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~---~~~~~~l~dfg~~~~~~~ 155 (258)
T smart00219 79 VMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVG---ENLVVKISDFGLSRDLYD 155 (258)
T ss_pred EEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEc---cCCeEEEcccCCceeccc
Confidence 9999999999999876554 99999999999999999999999999999999999994 566899999999987654
Q ss_pred CCccc--ccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHH
Q 010013 224 GDVFK--DLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (520)
Q Consensus 224 ~~~~~--~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (520)
..... ...+++.|+|||.+. ..++.++||||||+++++|++ |..||...........+........ ...++..
T Consensus 156 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 232 (258)
T smart00219 156 DDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRLPK---PENCPPE 232 (258)
T ss_pred ccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCC---CCcCCHH
Confidence 32222 123678899999885 458899999999999999998 8999988887777777766544322 2357899
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHc
Q 010013 300 AKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 300 ~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
+.+++.+||..+|++|||+.++++
T Consensus 233 ~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 233 IYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred HHHHHHHHCcCChhhCcCHHHHHh
Confidence 999999999999999999999986
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=306.29 Aligned_cols=249 Identities=24% Similarity=0.392 Sum_probs=206.2
Q ss_pred ccceeecceeeccCCeEEEEEEEcC-----CCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKD-----TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~ 140 (520)
.++|++.+.||+|+||.||+|.+.. ++..+|+|.+.... .......+.+|+.+++++. ||||+++++++..+
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~ei~~l~~l~-h~~iv~~~~~~~~~ 80 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFD-HPNIVKLLGVCAVG 80 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc--CHHHHHHHHHHHHHHHhcC-CCchheEEEEEcCC
Confidence 4679999999999999999998753 57889999886432 2233467889999999998 99999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHhcC----------------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCc
Q 010013 141 HSVNLIMDLCAGGELFDRIIAKG----------------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPEN 198 (520)
Q Consensus 141 ~~~~lv~e~~~g~~L~~~l~~~~----------------------~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~N 198 (520)
...++||||+++++|.+++.... .+++..+..++.||+.||.|||++|++||||||+|
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~n 160 (288)
T cd05050 81 KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRN 160 (288)
T ss_pred CccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhh
Confidence 99999999999999999986432 36788899999999999999999999999999999
Q ss_pred EEeecCCCCCCeeEeecccccccCCCCc---ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCC
Q 010013 199 FLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGET 273 (520)
Q Consensus 199 Ill~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~ 273 (520)
|+++ .++.++|+|||++........ ......+..|+|||.+. ..++.++|||||||++|+|++ |..||.+..
T Consensus 161 il~~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~ 237 (288)
T cd05050 161 CLVG---ENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMA 237 (288)
T ss_pred eEec---CCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 9994 567799999999876532221 11223466799999875 458899999999999999997 889998888
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 274 EQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
..+....+..+..... ...++..+.+++.+||+.+|++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 238 HEEVIYYVRDGNVLSC---PDNCPLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred HHHHHHHHhcCCCCCC---CCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 7777777665543211 2367899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-40 Score=317.24 Aligned_cols=257 Identities=32% Similarity=0.558 Sum_probs=221.7
Q ss_pred eeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 010013 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMD 148 (520)
Q Consensus 69 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e 148 (520)
|..++.||-|+||.|.+++..+|...||.|.+.+..+....++.-++.|-.||.... .+-||+||-.|.+.+++|+||+
T Consensus 631 Fvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEAD-n~WVVrLyySFQDkdnLYFVMd 709 (1034)
T KOG0608|consen 631 FVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEAD-NEWVVRLYYSFQDKDNLYFVMD 709 (1034)
T ss_pred eEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcC-CcceEEEEEEeccCCceEEEEe
Confidence 556788999999999999999999999999999888877777888899999999887 8999999999999999999999
Q ss_pred ccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC------
Q 010013 149 LCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK------ 222 (520)
Q Consensus 149 ~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~------ 222 (520)
|++||++.++|.+.+-+++..+..++..+.+|+.+.|..|+|||||||+|||+ +.+++|||+|||++.-+.
T Consensus 710 YIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILI---DrdGHIKLTDFGLCTGfRWTHdsk 786 (1034)
T KOG0608|consen 710 YIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHDSK 786 (1034)
T ss_pred ccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEE---ccCCceeeeeccccccceeccccc
Confidence 99999999999999999999999999999999999999999999999999999 678999999999986431
Q ss_pred ---CCC----------------------------------cccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh
Q 010013 223 ---PGD----------------------------------VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS 264 (520)
Q Consensus 223 ---~~~----------------------------------~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~ 264 (520)
.+. .....+||+.|+|||++. ..++..+|.||.|||||+|+.
T Consensus 787 YYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~ 866 (1034)
T KOG0608|consen 787 YYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLV 866 (1034)
T ss_pred cccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhh
Confidence 100 011247999999999986 469999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC---CHHHHHcCCccccC
Q 010013 265 GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERL---SAAEVLNHPWMRVD 330 (520)
Q Consensus 265 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp---s~~~~l~~~~~~~~ 330 (520)
|++||......+...++.+....+......++++++.++|.++.. +++.|. .++|+..||||+..
T Consensus 867 g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~-sad~RLGkng~d~vKaHpfFkgI 934 (1034)
T KOG0608|consen 867 GQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCC-SADSRLGKNGADQVKAHPFFKGI 934 (1034)
T ss_pred CCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhc-ChhhhhcccchhhhhcCcccccc
Confidence 999999888766655555444333333446889999999998764 678888 57789999999864
|
|
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-38 Score=301.49 Aligned_cols=248 Identities=22% Similarity=0.390 Sum_probs=206.1
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCc---EEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQ---QFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~---~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
+.|...+.||+|+||.||+|.++.++. .+|+|.+.... .....+.+..|+.+++++. ||||+++.+++...+..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 81 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY--TEKQRQDFLSEASIMGQFS-HHNIIRLEGVVTKFKPA 81 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHhcCC-CCCeeEEEEEEccCCCc
Confidence 468888999999999999999876554 78999885432 2334567889999999998 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 144 NLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
++||||+++++|.+++... +.+++..+..++.|++.||.|||+.|++|+||||+||+++ .+..+||+|||++....
T Consensus 82 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~---~~~~~kl~dfg~~~~~~ 158 (268)
T cd05063 82 MIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVN---SNLECKVSDFGLSRVLE 158 (268)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEc---CCCcEEECCCccceecc
Confidence 9999999999999988764 5689999999999999999999999999999999999994 56779999999988654
Q ss_pred CCCcc--c--ccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCC
Q 010013 223 PGDVF--K--DLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (520)
Q Consensus 223 ~~~~~--~--~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (520)
..... . ....+..|+|||.+. +.++.++|||||||++|++++ |..||......+....+...... + ....+
T Consensus 159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~-~--~~~~~ 235 (268)
T cd05063 159 DDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRL-P--APMDC 235 (268)
T ss_pred cccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCC-C--CCCCC
Confidence 32211 1 112345799999876 458899999999999999997 99999888877777777654321 1 22357
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 297 SSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 297 ~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
+..+.+++.+||+.+|++||++.++++
T Consensus 236 ~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 236 PSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred CHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-39 Score=304.00 Aligned_cols=252 Identities=30% Similarity=0.526 Sum_probs=208.1
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccC--CcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI--NRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
+|.+.+.||+|+||.||++.+..++..+++|++...... .......+.+|+.+++++. ||||+++++++.+....++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l 79 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLD-HPAIVKFHASFLERDAFCI 79 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCC-CCcHHHHHHHHhcCCceEE
Confidence 588999999999999999999877777777766532221 2223345678999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 146 IMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~----~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
||||+++++|.+.+.. ...+++..+..++.|++.||.|||+.|++|+||+|+||+++ ++.++|+|||++...
T Consensus 80 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~----~~~~~l~d~g~~~~~ 155 (260)
T cd08222 80 ITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLK----NNLLKIGDFGVSRLL 155 (260)
T ss_pred EEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEee----cCCEeecccCceeec
Confidence 9999999999888753 35689999999999999999999999999999999999995 345999999998776
Q ss_pred CCCC-cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHH
Q 010013 222 KPGD-VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (520)
Q Consensus 222 ~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (520)
.... ......|++.|+|||.+.+ .++.++|+||||+++|+|++|..||...........+..+..+.. ...++..
T Consensus 156 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 232 (260)
T cd08222 156 MGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSL---PETYSRQ 232 (260)
T ss_pred CCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCC---cchhcHH
Confidence 4332 2334568889999998754 478899999999999999999999987776666666554432221 2367889
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 300 AKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 300 ~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
+.++|.+||..+|++||++.++++||||
T Consensus 233 ~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 233 LNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred HHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 9999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-38 Score=299.37 Aligned_cols=244 Identities=23% Similarity=0.371 Sum_probs=202.3
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+...||+|++|.||+|.+..+ ..+|+|.+.... ...+.+.+|+.+++++. |||++++++++. .+..++|
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~----~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~-~~~~~~v 78 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGT----MMPEAFLQEAQIMKKLR-HDKLVPLYAVVS-EEPIYIV 78 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCC----ccHHHHHHHHHHHHhCC-CCCeeeEEEEEc-CCCcEEE
Confidence 6799999999999999999988765 468999875432 23467889999999998 999999999875 4568899
Q ss_pred EeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 147 MDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
|||+.+++|.+++.... .+++..+..++.|++.||.|||+.|++|+||||+||++ ++++.++|+|||.+......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill---~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05069 79 TEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILV---GDNLVCKIADFGLARLIEDN 155 (260)
T ss_pred EEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEE---cCCCeEEECCCccceEccCC
Confidence 99999999999987643 47899999999999999999999999999999999999 45678999999999865432
Q ss_pred Cc--ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHH
Q 010013 225 DV--FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300 (520)
Q Consensus 225 ~~--~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (520)
.. .....++..|+|||... +.++.++||||||+++|+|++ |..||.+....+....+...... .....++..+
T Consensus 156 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 232 (260)
T cd05069 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRM---PCPQGCPESL 232 (260)
T ss_pred cccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---CCCcccCHHH
Confidence 21 12234567899999876 458889999999999999999 99999888877777666554221 1224678999
Q ss_pred HHHHHHhcccCCCCCCCHHHHHc
Q 010013 301 KDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 301 ~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.+++.+||..+|++||+++++++
T Consensus 233 ~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 233 HELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred HHHHHHHccCCcccCcCHHHHHH
Confidence 99999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=317.89 Aligned_cols=253 Identities=24% Similarity=0.360 Sum_probs=203.0
Q ss_pred cccceeecceeeccCCeEEEEEEEcC-----CCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKD-----TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~ 139 (520)
..+.|.+++.||+|+||.||+|.++. ++..||+|++.... .....+.+.+|+.++.++..||||+++++++..
T Consensus 35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~ 112 (401)
T cd05107 35 PRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA--RSSEKQALMSELKIMSHLGPHLNIVNLLGACTK 112 (401)
T ss_pred cHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC--ChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEcc
Confidence 34668889999999999999999643 45689999996432 223345788999999999779999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHhcC--------------------------------------------------------
Q 010013 140 RHSVNLIMDLCAGGELFDRIIAKG-------------------------------------------------------- 163 (520)
Q Consensus 140 ~~~~~lv~e~~~g~~L~~~l~~~~-------------------------------------------------------- 163 (520)
.+..++||||+.+|+|.+++.+.+
T Consensus 113 ~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (401)
T cd05107 113 GGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPM 192 (401)
T ss_pred CCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccch
Confidence 999999999999999999886532
Q ss_pred ------------------------------------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEe
Q 010013 164 ------------------------------------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLF 201 (520)
Q Consensus 164 ------------------------------------------~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll 201 (520)
.+++..+..++.||+.||.|||+.|++||||||+|||+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl 272 (401)
T cd05107 193 QDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLI 272 (401)
T ss_pred hcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEE
Confidence 25667788899999999999999999999999999999
Q ss_pred ecCCCCCCeeEeecccccccCCCCc---ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHH
Q 010013 202 SSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQS 276 (520)
Q Consensus 202 ~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~ 276 (520)
+ .+..+||+|||+++....... .....+++.|+|||.+.+ .++.++|||||||++|+|++ |..||......+
T Consensus 273 ~---~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~ 349 (401)
T cd05107 273 C---EGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNE 349 (401)
T ss_pred e---CCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchH
Confidence 4 467799999999986532211 122356788999998864 48889999999999999998 899997765544
Q ss_pred HHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
............. ....++..+.+++.+||..+|++||++.++++.
T Consensus 350 ~~~~~~~~~~~~~--~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 350 QFYNAIKRGYRMA--KPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred HHHHHHHcCCCCC--CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 4333333222221 224578999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-38 Score=299.79 Aligned_cols=246 Identities=22% Similarity=0.358 Sum_probs=204.3
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
..++|.+.++||+|+||.||+|..+. ++.+|+|.+..... ..+.+.+|+.+++++. ||||+++++++. ....+
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~-~~~~a~K~~~~~~~----~~~~~~~E~~~l~~l~-h~~i~~~~~~~~-~~~~~ 76 (260)
T cd05067 4 PRETLKLVKKLGAGQFGEVWMGYYNG-HTKVAIKSLKQGSM----SPEAFLAEANLMKQLQ-HPRLVRLYAVVT-QEPIY 76 (260)
T ss_pred chHHceeeeeeccCccceEEeeecCC-CceEEEEEecCCCC----cHHHHHHHHHHHHhcC-CcCeeeEEEEEc-cCCcE
Confidence 35679999999999999999998754 67899998864332 3467889999999998 999999999874 45689
Q ss_pred EEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 145 LIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
++|||+.+++|.+++... ..+++..+..++.|++.||.|||+.|++||||||+||+++ .++.++|+|||++....
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~---~~~~~~l~dfg~~~~~~ 153 (260)
T cd05067 77 IITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVS---ETLCCKIADFGLARLIE 153 (260)
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEc---CCCCEEEccCcceeecC
Confidence 999999999999988653 3589999999999999999999999999999999999994 56789999999998764
Q ss_pred CCCc--ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCH
Q 010013 223 PGDV--FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298 (520)
Q Consensus 223 ~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (520)
.... .....++..|+|||.+.. .++.++||||||+++|++++ |+.||.+....+....+...... .....++.
T Consensus 154 ~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 230 (260)
T cd05067 154 DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRM---PRPDNCPE 230 (260)
T ss_pred CCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCC---CCCCCCCH
Confidence 2221 122345678999998864 57889999999999999999 99999888777776666544221 12245788
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 299 SAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 299 ~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.+.+++.+||..+|++|||++++++
T Consensus 231 ~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 231 ELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred HHHHHHHHHccCChhhCCCHHHHHH
Confidence 9999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-38 Score=299.06 Aligned_cols=247 Identities=24% Similarity=0.398 Sum_probs=207.4
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
..++|.+.+.||+|+||.||+|.+.. ++.+|+|.+.... ...+.+.+|+.+++++. ||||+++++++......+
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~~-~~~~~vK~~~~~~----~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 77 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWNG-TTKVAVKTLKPGT----MSPEAFLQEAQIMKKLR-HDKLVQLYAVCSEEEPIY 77 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEcC-CceEEEEEecCCc----cCHHHHHHHHHHHhhCC-CCCEeeeeeeeecCCceE
Confidence 35789999999999999999999764 5779999886433 23467889999999998 999999999999989999
Q ss_pred EEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 145 LIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
+||||+++++|.+++... ..+++..+..++.|++.||.|||++|++|+||||+||+++ .++.++|+|||.+....
T Consensus 78 ~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~---~~~~~~l~d~g~~~~~~ 154 (261)
T cd05034 78 IVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVG---ENLVCKIADFGLARLIE 154 (261)
T ss_pred EEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEc---CCCCEEECccccceecc
Confidence 999999999999998764 3689999999999999999999999999999999999994 56789999999988764
Q ss_pred CCCcc--cccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCH
Q 010013 223 PGDVF--KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298 (520)
Q Consensus 223 ~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (520)
..... ....++..|+|||.+.+ .++.++||||||+++|++++ |+.||.+.........+..+.... ....++.
T Consensus 155 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 231 (261)
T cd05034 155 DDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMP---RPPNCPE 231 (261)
T ss_pred chhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC---CCCCCCH
Confidence 32111 12234568999998864 58889999999999999998 999998888777777776543211 1235688
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 299 SAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 299 ~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.+.+++.+||..+|++||++.++++
T Consensus 232 ~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 232 ELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred HHHHHHHHHcccCcccCCCHHHHHH
Confidence 9999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=315.05 Aligned_cols=251 Identities=25% Similarity=0.393 Sum_probs=198.6
Q ss_pred ccceeecceeeccCCeEEEEEEEc-----CCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe-
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHK-----DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED- 139 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~- 139 (520)
.++|++++.||+|+||.||+|.+. .+++.||||++.... .......+.+|+.++.++.+||||+++++++..
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACTKP 83 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC--ChHHHHHHHHHHHHHHhccCCccHhhhcceeecC
Confidence 467999999999999999999853 457889999986432 223346788999999999769999999998764
Q ss_pred CCeEEEEEeccCCCchHHHHHhc---------------------------------------------------------
Q 010013 140 RHSVNLIMDLCAGGELFDRIIAK--------------------------------------------------------- 162 (520)
Q Consensus 140 ~~~~~lv~e~~~g~~L~~~l~~~--------------------------------------------------------- 162 (520)
+...++||||+++|+|.+++...
T Consensus 84 ~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (343)
T cd05103 84 GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 163 (343)
T ss_pred CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchh
Confidence 45688999999999999988642
Q ss_pred ----------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCc---ccc
Q 010013 163 ----------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV---FKD 229 (520)
Q Consensus 163 ----------~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~ 229 (520)
..+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||++........ ...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~---~~~~~kl~dfg~~~~~~~~~~~~~~~~ 240 (343)
T cd05103 164 EEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKDPDYVRKGD 240 (343)
T ss_pred hhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEc---CCCcEEEEecccccccccCcchhhcCC
Confidence 1367788889999999999999999999999999999994 567899999999886532211 112
Q ss_pred cccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCCCCHHHHHHHHH
Q 010013 230 LVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQ-SIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306 (520)
Q Consensus 230 ~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 306 (520)
..+++.|+|||.+. ..++.++||||||+++|++++ |..||...... .....+..+.. .... ..+++.+.+++.+
T Consensus 241 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~ 317 (343)
T cd05103 241 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR-MRAP--DYTTPEMYQTMLD 317 (343)
T ss_pred CCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCC-CCCC--CCCCHHHHHHHHH
Confidence 23566799999875 458899999999999999997 99999775433 33333333322 1111 2467899999999
Q ss_pred hcccCCCCCCCHHHHHcC
Q 010013 307 MLHADPKERLSAAEVLNH 324 (520)
Q Consensus 307 ~l~~dp~~Rps~~~~l~~ 324 (520)
||+.+|++|||+.++++|
T Consensus 318 cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 318 CWHGEPSQRPTFSELVEH 335 (343)
T ss_pred HccCChhhCcCHHHHHHH
Confidence 999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-40 Score=281.70 Aligned_cols=255 Identities=28% Similarity=0.545 Sum_probs=211.1
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--Ce
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--HS 142 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~--~~ 142 (520)
..++|.+.+++|+|-|+.||.|....+++.++||++++- ..+.+.+|+.||..|++||||++++++..+. ..
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV------kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Skt 109 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV------KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKT 109 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH------HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccC
Confidence 457899999999999999999999888999999998653 3478999999999999999999999998764 45
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
..+|+||+.+.+...+. ..++...+..++.+++.||.|+|+.||+|||+||.|++++ .....++|+|+|+|.+..
T Consensus 110 paLiFE~v~n~Dfk~ly---~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmId--h~~rkLrlIDWGLAEFYH 184 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQLY---PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMID--HELRKLRLIDWGLAEFYH 184 (338)
T ss_pred chhHhhhhccccHHHHh---hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeec--hhhceeeeeecchHhhcC
Confidence 77999999887664433 4688999999999999999999999999999999999997 456679999999999999
Q ss_pred CCCcccccccCCCccCchhhc--ccCCCcchhHHHHHHHHHHhhCCCCCCC-CCHHHHHHHHH-------------cCCC
Q 010013 223 PGDVFKDLVGSAYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWG-ETEQSIFDAIL-------------RGHI 286 (520)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~--~~~~~~~Dv~slG~~l~~ll~g~~pf~~-~~~~~~~~~~~-------------~~~~ 286 (520)
++...+-.+.+..|-.||.+. ..|+..-|+|||||++..|+..+.||.. .+..+.+-+|. +-..
T Consensus 185 p~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i 264 (338)
T KOG0668|consen 185 PGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQI 264 (338)
T ss_pred CCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHcc
Confidence 998888888999999999986 4588999999999999999999998743 33333222221 0001
Q ss_pred CC-----------CCCCC---------CCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 287 DF-----------SSDPW---------PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 287 ~~-----------~~~~~---------~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
.+ ...+| .-+++++.+|+.++|..|..+|+|+.|++.||||...
T Consensus 265 ~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~ 328 (338)
T KOG0668|consen 265 DLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPV 328 (338)
T ss_pred CCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHH
Confidence 10 11111 1246899999999999999999999999999999743
|
|
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-38 Score=299.00 Aligned_cols=242 Identities=26% Similarity=0.424 Sum_probs=202.1
Q ss_pred ceeeccCCeEEEEEEEcC-CC--cEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEec
Q 010013 73 RELGRGQFGVTYLVTHKD-TK--QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDL 149 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~-~~--~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~ 149 (520)
+.||+|++|.||+|.+.. ++ ..+|+|.+...... ...+.+.+|+.+++++. ||||+++++++.. ...++||||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~-~~~~~v~e~ 76 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLD-HENLIRLYGVVLT-HPLMMVTEL 76 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhcC-CCCccceeEEEcC-CeEEEEEEe
Confidence 468999999999999865 33 36899998764432 45678899999999998 9999999999988 899999999
Q ss_pred cCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCc-
Q 010013 150 CAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV- 226 (520)
Q Consensus 150 ~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~- 226 (520)
+++++|.+.+.... .+++..+..++.|++.||.|||++|++|+||||+||+++ .++.+||+|||++........
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~---~~~~~kl~dfg~~~~~~~~~~~ 153 (257)
T cd05040 77 APLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLA---SDDKVKIGDFGLMRALPQNEDH 153 (257)
T ss_pred cCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEe---cCCEEEeccccccccccccccc
Confidence 99999999997754 689999999999999999999999999999999999995 457899999999987643221
Q ss_pred ---ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHH
Q 010013 227 ---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (520)
Q Consensus 227 ---~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (520)
.....++..|+|||.+.. .++.++|||||||++|+|++ |..||......+....+......... ...++..+.
T Consensus 154 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 231 (257)
T cd05040 154 YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLER--PEACPQDIY 231 (257)
T ss_pred eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCC--CccCCHHHH
Confidence 112356778999998864 58899999999999999998 99999888777766666543222221 235789999
Q ss_pred HHHHHhcccCCCCCCCHHHHHc
Q 010013 302 DIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 302 ~li~~~l~~dp~~Rps~~~~l~ 323 (520)
+++.+||+.+|++|||+.++++
T Consensus 232 ~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 232 NVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred HHHHHHCCCCcccCCCHHHHHH
Confidence 9999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-38 Score=297.98 Aligned_cols=241 Identities=24% Similarity=0.400 Sum_probs=201.6
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEE-EeCCeEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAY-EDRHSVNL 145 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~-~~~~~~~l 145 (520)
.+|.+.+.||+|+||.||++... +..+|+|.+... ...+.+.+|+.+++++. |+|++++++++ ...+..++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~l 77 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-----ATAQAFLAEASVMTQLR-HSNLVQLLGVIVEEKGGLYI 77 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCC-----chHHHHHHHHHHHHhCC-CCCeeeEEEEEEcCCCceEE
Confidence 46889999999999999999774 678999987532 23467889999999998 99999999975 45567899
Q ss_pred EEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 146 IMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
+|||+++++|.+++...+ .+++..+..++.|++.||.|||++|++||||||+||++ ++++.+||+|||++.....
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~---~~~~~~kl~dfg~~~~~~~ 154 (256)
T cd05082 78 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEASS 154 (256)
T ss_pred EEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEE---cCCCcEEecCCccceeccc
Confidence 999999999999987644 38899999999999999999999999999999999999 4577899999999886533
Q ss_pred CCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHH
Q 010013 224 GDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (520)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (520)
.. ....++..|+|||++.+ .++.++|||||||++|+|++ |+.||...........+..+... ...+.+++.+.
T Consensus 155 ~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 229 (256)
T cd05082 155 TQ--DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM---DAPDGCPPVVY 229 (256)
T ss_pred cC--CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCC---CCCCCCCHHHH
Confidence 22 22344567999998864 48889999999999999997 99999888777776666554322 22346789999
Q ss_pred HHHHHhcccCCCCCCCHHHHHc
Q 010013 302 DIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 302 ~li~~~l~~dp~~Rps~~~~l~ 323 (520)
+++.+||+.+|++|||+.++++
T Consensus 230 ~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 230 DVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred HHHHHHhcCChhhCcCHHHHHH
Confidence 9999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-38 Score=301.31 Aligned_cols=247 Identities=24% Similarity=0.333 Sum_probs=205.4
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCc----EEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQ----QFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~----~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~ 142 (520)
.+|.+.+.||+|+||.||+|.++.+|. .+|+|.+..... ......+.+|+.++.++. ||||+++++++.. ..
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~-~~ 82 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS--PKANKEILDEAYVMASVD-HPHVVRLLGICLS-SQ 82 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC--HHHHHHHHHHHHHHHhCC-CCCcceEEEEEec-Cc
Confidence 578999999999999999999876654 588888754432 334567889999999998 9999999999887 78
Q ss_pred EEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 143 VNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
.++||||+++++|.+++... ..+++..+..++.||+.||.|||+.|++|+||||+||+++ .++.+||+|||.+...
T Consensus 83 ~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~---~~~~~kL~dfg~~~~~ 159 (279)
T cd05057 83 VQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVK---TPQHVKITDFGLAKLL 159 (279)
T ss_pred eEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEc---CCCeEEECCCcccccc
Confidence 89999999999999998774 4689999999999999999999999999999999999994 5667999999999876
Q ss_pred CCCCccc---ccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCC
Q 010013 222 KPGDVFK---DLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (520)
Q Consensus 222 ~~~~~~~---~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (520)
....... ...++..|+|||.+. ..++.++|+||||+++|++++ |..||.+....+....+..+... +. ....
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~-~~--~~~~ 236 (279)
T cd05057 160 DVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGERL-PQ--PPIC 236 (279)
T ss_pred cCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCCC-CC--CCCC
Confidence 5332211 122356799999875 458899999999999999998 99999988887777777654322 21 1346
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 297 SSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 297 ~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
+..+.+++.+||..+|++|||+.++++
T Consensus 237 ~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 237 TIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred CHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 789999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-38 Score=302.32 Aligned_cols=250 Identities=22% Similarity=0.432 Sum_probs=208.8
Q ss_pred cceeecceeeccCCeEEEEEEEcC-----CCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKD-----TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~ 141 (520)
++|.+.+.||+|+||.||+|..+. +.+.+++|.+.... .....+.+.+|+++++++. ||||+++++++.+..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~ 81 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK--DENLQSEFRRELDMFRKLS-HKNVVRLLGLCREAE 81 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc--chHHHHHHHHHHHHHHhcC-CcceeeeEEEECCCC
Confidence 578899999999999999999764 34678999875432 1224567899999999998 999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeE
Q 010013 142 SVNLIMDLCAGGELFDRIIAKG---------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKA 212 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~l~~~~---------~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl 212 (520)
..++||||+++++|.+++.... .+++..+..++.||+.||.|||+.||+||||||+||+++ .++.++|
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~---~~~~~~l 158 (275)
T cd05046 82 PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVS---SQREVKV 158 (275)
T ss_pred cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEe---CCCcEEE
Confidence 9999999999999999997765 689999999999999999999999999999999999994 4667999
Q ss_pred eecccccccCCCC--cccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCC
Q 010013 213 TDFGLSVFFKPGD--VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDF 288 (520)
Q Consensus 213 ~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~ 288 (520)
+|||++....... ......+++.|+|||.+. +.++.++||||||+++|++++ |..||...........+..+...+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~ 238 (275)
T cd05046 159 SLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLEL 238 (275)
T ss_pred cccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCC
Confidence 9999987543221 223345677899999875 457889999999999999998 889998877777777766554443
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 289 SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 289 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
.. ...++..+.+++.+||+.+|++|||+.+++..
T Consensus 239 ~~--~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 239 PV--PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred CC--CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 32 24678999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=310.24 Aligned_cols=254 Identities=24% Similarity=0.348 Sum_probs=198.5
Q ss_pred ecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEecc
Q 010013 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLC 150 (520)
Q Consensus 71 ~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~ 150 (520)
+++.+|.| |.||.+....+++.+|+|++.... ......+.+.+|+.+++.++ ||||+++++++...+..+++|||+
T Consensus 6 i~~~~~~~--~~v~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~~~Ei~~l~~l~-h~~i~~~~~~~~~~~~~~~~~e~~ 81 (314)
T cd08216 6 IGKCFEDL--MIVHLAKHKPTNTLVAVKKINLDS-CSKEDLKLLQQEIITSRQLQ-HPNILPYVTSFIVDSELYVVSPLM 81 (314)
T ss_pred hhHhhcCC--ceEEEEEecCCCCEEEEEEEeccc-cchhHHHHHHHHHHHHHhcC-CcchhhhhheeecCCeEEEEEecc
Confidence 34444444 556666666689999999987542 23445678999999999998 999999999999999999999999
Q ss_pred CCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC---
Q 010013 151 AGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD--- 225 (520)
Q Consensus 151 ~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~--- 225 (520)
++++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||+++ .++.+||+|||.+.......
T Consensus 82 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~---~~~~~kl~d~~~~~~~~~~~~~~ 158 (314)
T cd08216 82 AYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLS---GDGKVVLSGLRYSVSMIKHGKRQ 158 (314)
T ss_pred CCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEe---cCCceEEecCccceeeccccccc
Confidence 999999988763 4589999999999999999999999999999999999995 46779999999887553211
Q ss_pred -----cccccccCCCccCchhhcc---cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCC-------C-
Q 010013 226 -----VFKDLVGSAYYVAPEVLRR---NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDF-------S- 289 (520)
Q Consensus 226 -----~~~~~~gt~~y~aPE~~~~---~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-------~- 289 (520)
......++..|+|||++.+ .++.++|||||||++|+|++|..||..............+.... +
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (314)
T cd08216 159 RVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPL 238 (314)
T ss_pred cccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhh
Confidence 1123456778999999854 47889999999999999999999998765543332222211100 0
Q ss_pred ----------------------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 290 ----------------------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 290 ----------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
......++..+.+++.+||..||++|||+.++|+||||+...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~ 302 (314)
T cd08216 239 YEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCK 302 (314)
T ss_pred hcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhc
Confidence 000012346788999999999999999999999999998554
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-38 Score=303.03 Aligned_cols=247 Identities=25% Similarity=0.388 Sum_probs=194.8
Q ss_pred cce-eecceeeccCCeEEEEEE----EcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe--
Q 010013 67 NTY-IFGRELGRGQFGVTYLVT----HKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED-- 139 (520)
Q Consensus 67 ~~y-~~~~~lg~G~~g~Vy~~~----~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~-- 139 (520)
++| .+.+.||+|+||+||++. ...++..+|+|.+.... .......+.+|+.+++++. ||||+++++++..
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~ 79 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC--GQQNTSGWKKEINILKTLY-HENIVKYKGCCSEQG 79 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc--ChHHHHHHHHHHHHHHhCC-CCCEeeEEEEEecCC
Confidence 456 889999999999998865 33567889999986432 2234567889999999998 9999999998765
Q ss_pred CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccc
Q 010013 140 RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (520)
Q Consensus 140 ~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~ 219 (520)
...+++||||+++++|.+++... .+++..+..++.|++.||.|||++|++||||||+||+++ .++.++|+|||++.
T Consensus 80 ~~~~~lv~e~~~~~~l~~~~~~~-~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~~l~dfg~~~ 155 (283)
T cd05080 80 GKGLQLIMEYVPLGSLRDYLPKH-KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLD---NDRLVKIGDFGLAK 155 (283)
T ss_pred CceEEEEecCCCCCCHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEc---CCCcEEEeeccccc
Confidence 34689999999999999988664 699999999999999999999999999999999999994 56789999999998
Q ss_pred ccCCCCc----ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHH--H-------------HHH
Q 010013 220 FFKPGDV----FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQ--S-------------IFD 279 (520)
Q Consensus 220 ~~~~~~~----~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~--~-------------~~~ 279 (520)
....... .....++..|+|||.+. ..++.++||||||+++|+|++|..||...... + ...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (283)
T cd05080 156 AVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIE 235 (283)
T ss_pred ccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhh
Confidence 7643321 11224566799999886 45889999999999999999999998653321 0 000
Q ss_pred HHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 280 AILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.+... ... .....++..+.+++.+||+.+|++|||+.++++
T Consensus 236 ~~~~~-~~~--~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 236 LLERG-MRL--PCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred hhhcC-CCC--CCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 11111 111 112356889999999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-38 Score=296.48 Aligned_cols=246 Identities=26% Similarity=0.489 Sum_probs=205.9
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
..|.+.+.||+|+||.||+|.+.. +..+|+|.+..... ....+.+|+++++++. ||||+++++++......++|
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~-~~~~~~k~~~~~~~----~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v 77 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLE-KRKVAIKTIREGAM----SEEDFIEEAQVMMKLS-HPKLVQLYGVCTERSPICLV 77 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeC-CCeEEEEECCCCCC----CHHHHHHHHHHHHhCC-CCCeeeEEEEEccCCceEEE
Confidence 468889999999999999998864 67899998864322 2356889999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 147 MDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
|||+.+++|.+++... +.+++..+..++.|++.||.|||+.|++|+||||+||+++ .++.++|+|||.+.......
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~---~~~~~~l~d~g~~~~~~~~~ 154 (256)
T cd05112 78 FEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVG---ENQVVKVSDFGMTRFVLDDQ 154 (256)
T ss_pred EEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEc---CCCeEEECCCcceeecccCc
Confidence 9999999999988764 4689999999999999999999999999999999999994 56679999999987654322
Q ss_pred c--ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHH
Q 010013 226 V--FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (520)
Q Consensus 226 ~--~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (520)
. .....++..|+|||.+. +.++.++||||||+++|+|++ |..||...........+..+...... ...+..+.
T Consensus 155 ~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 231 (256)
T cd05112 155 YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYKP---RLASQSVY 231 (256)
T ss_pred ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCCC---CCCCHHHH
Confidence 1 11223456899999886 458889999999999999998 99999888877777777655333222 24578999
Q ss_pred HHHHHhcccCCCCCCCHHHHHcC
Q 010013 302 DIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 302 ~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
+++.+||+.+|++|||+.+++++
T Consensus 232 ~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 232 ELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred HHHHHHcccChhhCCCHHHHHHh
Confidence 99999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-38 Score=301.51 Aligned_cols=249 Identities=21% Similarity=0.293 Sum_probs=205.7
Q ss_pred ccceeecceeeccCCeEEEEEEEcC----CCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe-C
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKD----TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED-R 140 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~----~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~-~ 140 (520)
.++|.+.+.||+|+||.||+|.+.. ++..+++|.+... ......+.+.+|+.+++++. ||||+++++++.. +
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~ 81 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH--ASEIQVTLLLQESCLLYGLS-HQNILPILHVCIEDG 81 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC--CCHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEecCC
Confidence 4679999999999999999999876 3578899987532 23445677889999999997 9999999998765 5
Q ss_pred CeEEEEEeccCCCchHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeE
Q 010013 141 HSVNLIMDLCAGGELFDRIIAK--------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKA 212 (520)
Q Consensus 141 ~~~~lv~e~~~g~~L~~~l~~~--------~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl 212 (520)
...+++++|+++++|.+++... ..+++..+..++.|++.||.|||++|++|+||||+||+++ .+..+||
T Consensus 82 ~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~---~~~~~kl 158 (280)
T cd05043 82 EPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVID---EELQVKI 158 (280)
T ss_pred CCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEc---CCCcEEE
Confidence 7789999999999999988653 3588999999999999999999999999999999999994 5678999
Q ss_pred eecccccccCCCCcc---cccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCC
Q 010013 213 TDFGLSVFFKPGDVF---KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHID 287 (520)
Q Consensus 213 ~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~ 287 (520)
+|||+++.+...... ....++..|+|||++.+ .++.++||||||+++|++++ |+.||......+....+..+. .
T Consensus 159 ~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~ 237 (280)
T cd05043 159 TDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGY-R 237 (280)
T ss_pred CCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCC-C
Confidence 999999865433211 22345678999998864 48899999999999999999 999998877766666555432 2
Q ss_pred CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 288 FSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 288 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
+. ....+++.+.+++.+||..+|++|||+.++++
T Consensus 238 ~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 238 LA--QPINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred CC--CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 22 22457899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-38 Score=299.65 Aligned_cols=248 Identities=27% Similarity=0.396 Sum_probs=204.2
Q ss_pred ccceeecceeeccCCeEEEEEEEcCC---CcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDT---KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~ 142 (520)
..+|.+.+.||+|+||.||+|.+... ...+|+|.+.... .....+.+.+|+.+++++. ||||+++++++.+ ..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~-~~ 80 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT--SPSVREKFLQEAYIMRQFD-HPHIVKLIGVITE-NP 80 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC--CHHHHHHHHHHHHHHHhCC-CCchhceeEEEcC-CC
Confidence 35688999999999999999987654 3568999875432 2344567899999999998 9999999998875 45
Q ss_pred EEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 143 VNLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
.++||||+++++|.+++.... .+++..+..++.|++.||.|||+.|++|+||||+||+++ .++.++|+|||++...
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~---~~~~~~l~d~g~~~~~ 157 (270)
T cd05056 81 VWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVS---SPDCVKLGDFGLSRYL 157 (270)
T ss_pred cEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEe---cCCCeEEccCceeeec
Confidence 789999999999999997654 589999999999999999999999999999999999995 4667999999998876
Q ss_pred CCCCcc--cccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 010013 222 KPGDVF--KDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (520)
Q Consensus 222 ~~~~~~--~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (520)
...... ....+++.|+|||.+. ..++.++||||||+++|++++ |..||......+....+..+.... ..+.++
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~---~~~~~~ 234 (270)
T cd05056 158 EDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERLP---MPPNCP 234 (270)
T ss_pred ccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcCC---CCCCCC
Confidence 433221 1223456799999876 458899999999999999886 999998888777666665543321 235778
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 298 SSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 298 ~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
..+.+++.+||..+|++|||+.+++.
T Consensus 235 ~~~~~li~~~l~~~P~~Rpt~~~~~~ 260 (270)
T cd05056 235 PTLYSLMTKCWAYDPSKRPRFTELKA 260 (270)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=294.29 Aligned_cols=241 Identities=26% Similarity=0.396 Sum_probs=199.1
Q ss_pred ceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 010013 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~g 152 (520)
+.||+|+||.||+|... ++..+|+|.+.... .......+.+|+.+++++. ||||+++++++......++||||+++
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~ 76 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDL--PQELKIKFLSEARILKQYD-HPNIVKLIGVCTQRQPIYIVMELVPG 76 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcC--CHHHHHHHHHHHHHHHhCC-CCCcCeEEEEEecCCccEEEEECCCC
Confidence 46899999999999865 57889999876432 2233456889999999997 99999999999999999999999999
Q ss_pred CchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCcc--cc
Q 010013 153 GELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF--KD 229 (520)
Q Consensus 153 ~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~--~~ 229 (520)
++|.+++... ..+++..+..++.|++.||.|||++|++||||||+||+++ .++.+||+|||++......... ..
T Consensus 77 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~---~~~~~~l~d~g~~~~~~~~~~~~~~~ 153 (250)
T cd05085 77 GDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVG---ENNVLKISDFGMSRQEDDGIYSSSGL 153 (250)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEc---CCCeEEECCCccceeccccccccCCC
Confidence 9999988654 4589999999999999999999999999999999999994 5677999999998764332211 11
Q ss_pred cccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHh
Q 010013 230 LVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKM 307 (520)
Q Consensus 230 ~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 307 (520)
..+++.|+|||++.+ .++.++||||||+++|++++ |..||.+.........+...... .....++..+.+++.+|
T Consensus 154 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~ 230 (250)
T cd05085 154 KQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRM---SCPQKCPDDVYKVMQRC 230 (250)
T ss_pred CCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCC---CCCCCCCHHHHHHHHHH
Confidence 234567999998864 58889999999999999998 99999888777666666544321 12246789999999999
Q ss_pred cccCCCCCCCHHHHHc
Q 010013 308 LHADPKERLSAAEVLN 323 (520)
Q Consensus 308 l~~dp~~Rps~~~~l~ 323 (520)
|..+|++|||+.++++
T Consensus 231 l~~~p~~Rp~~~~l~~ 246 (250)
T cd05085 231 WDYKPENRPKFSELQK 246 (250)
T ss_pred cccCcccCCCHHHHHH
Confidence 9999999999999975
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-38 Score=303.42 Aligned_cols=252 Identities=22% Similarity=0.325 Sum_probs=200.2
Q ss_pred ccceeecceeeccCCeEEEEEEEcC----------------CCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCC
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKD----------------TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN 129 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~----------------~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~ 129 (520)
.++|.+.+.||+|+||.||++.+.. ++..+|+|.+.... .....+.+.+|+.+++++. |||
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~~E~~~l~~l~-~~~ 80 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA--NKNARNDFLKEIKIMSRLK-DPN 80 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCC-CCC
Confidence 3579999999999999999986542 34568999886432 2334567889999999998 999
Q ss_pred eeEEEEEEEeCCeEEEEEeccCCCchHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCc
Q 010013 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKG-----------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPEN 198 (520)
Q Consensus 130 iv~l~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-----------~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~N 198 (520)
|+++++++...+..++||||+++++|.+++.... .+++..+..++.|++.||.|||+.|++|+||||+|
T Consensus 81 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~N 160 (296)
T cd05095 81 IIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRN 160 (296)
T ss_pred cceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChhe
Confidence 9999999999999999999999999999887642 36778899999999999999999999999999999
Q ss_pred EEeecCCCCCCeeEeecccccccCCCCc---ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh--CCCCCCCC
Q 010013 199 FLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS--GVPPFWGE 272 (520)
Q Consensus 199 Ill~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~--g~~pf~~~ 272 (520)
|+++ .++.++|+|||++..+..... .....+++.|++||... +.++.++|||||||++|+|++ |..||...
T Consensus 161 ili~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~ 237 (296)
T cd05095 161 CLVG---KNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQL 237 (296)
T ss_pred EEEc---CCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcccc
Confidence 9994 567899999999886543221 11223467899999764 568999999999999999998 78899877
Q ss_pred CHHHHHHHHHc----CCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 273 TEQSIFDAILR----GHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 273 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
...+....... ............++..+.+++.+||+.||++|||+.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 238 SDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred ChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 66555443321 1111111112457799999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-38 Score=332.72 Aligned_cols=249 Identities=26% Similarity=0.436 Sum_probs=212.5
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCc-----EEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQ-----QFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~-----~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~ 140 (520)
.....+.+.||+|+||.||.|...+... .||+|.+.+. ........|.+|..+|+++. |||||+++|++.+.
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~--~~~~~~~~Fl~Ea~~m~~f~-HpNiv~liGv~l~~ 767 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL--SSEQEVSDFLKEALLMSKFD-HPNIVSLIGVCLDS 767 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc--CCHHHHHHHHHHHHHHhcCC-CcceeeEEEeecCC
Confidence 3456677899999999999998875433 3888888543 34556788999999999999 99999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEe
Q 010013 141 HSVNLIMDLCAGGELFDRIIAK-------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKAT 213 (520)
Q Consensus 141 ~~~~lv~e~~~g~~L~~~l~~~-------~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~ 213 (520)
...+|++|||+||+|..+|.+. ..++....+.++.+|++|+.||+++++|||||...|+|++ ....+||+
T Consensus 768 ~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~---~~r~VKIa 844 (1025)
T KOG1095|consen 768 GPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLD---ERRVVKIA 844 (1025)
T ss_pred CCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeec---ccCcEEEc
Confidence 9999999999999999999875 2488999999999999999999999999999999999994 56889999
Q ss_pred ecccccccCCCCcccc---cccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCC
Q 010013 214 DFGLSVFFKPGDVFKD---LVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDF 288 (520)
Q Consensus 214 Dfg~a~~~~~~~~~~~---~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~ 288 (520)
|||+|+.+...+.+.. ..-...|||||.+. +.++.++|||||||++||++| |..||.+.+..+++..+..+. .+
T Consensus 845 DFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~gg-RL 923 (1025)
T KOG1095|consen 845 DFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGG-RL 923 (1025)
T ss_pred ccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCC-cc
Confidence 9999996543332221 12235799999987 679999999999999999999 999999999999888666665 22
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 289 SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 289 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
+ +...+|..+.+++..||+.+|++||++..+++
T Consensus 924 ~--~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 924 D--PPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred C--CCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 2 23588999999999999999999999999987
|
|
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=293.90 Aligned_cols=241 Identities=27% Similarity=0.399 Sum_probs=200.2
Q ss_pred ceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 010013 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~g 152 (520)
+.||+|+||.||+|.+.. ++.||+|.+..... ......+.+|+.+++++. ||||+++++++......++||||+.|
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~--~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~e~~~~ 76 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLP--PDLKRKFLQEAEILKQYD-HPNIVKLIGVCVQKQPIYIVMELVPG 76 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCC--HHHHHHHHHHHHHHHhCC-CCCeEEEEEEEecCCCeEEEEEcCCC
Confidence 468999999999999987 89999998865432 234567899999999998 99999999999999999999999999
Q ss_pred CchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCcc---c
Q 010013 153 GELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF---K 228 (520)
Q Consensus 153 ~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~---~ 228 (520)
++|.+++... ..+++..+..++.+++.||.|||++|++||||+|+||+++ .++.++|+|||.+......... .
T Consensus 77 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~---~~~~~~l~d~g~~~~~~~~~~~~~~~ 153 (251)
T cd05041 77 GSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVG---ENNVLKISDFGMSREEEGGIYTVSDG 153 (251)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEc---CCCcEEEeeccccccccCCcceeccc
Confidence 9999998663 4689999999999999999999999999999999999994 5677999999998865422111 1
Q ss_pred ccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHH
Q 010013 229 DLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306 (520)
Q Consensus 229 ~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 306 (520)
...++..|+|||.+. +.++.++||||||+++|+|++ |..||...........+..... .. ....++..+.+++.+
T Consensus 154 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~li~~ 230 (251)
T cd05041 154 LKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYR-MP--APQLCPEEIYRLMLQ 230 (251)
T ss_pred cCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCC-CC--CCccCCHHHHHHHHH
Confidence 122356799999876 458899999999999999999 8999988776666666554321 11 124678999999999
Q ss_pred hcccCCCCCCCHHHHHc
Q 010013 307 MLHADPKERLSAAEVLN 323 (520)
Q Consensus 307 ~l~~dp~~Rps~~~~l~ 323 (520)
||..+|++|||+.++++
T Consensus 231 ~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 231 CWAYDPENRPSFSEIYN 247 (251)
T ss_pred HhccChhhCcCHHHHHH
Confidence 99999999999999986
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-38 Score=300.81 Aligned_cols=240 Identities=18% Similarity=0.297 Sum_probs=192.0
Q ss_pred ceeeccCCeEEEEEEEcCCCc-------EEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 73 RELGRGQFGVTYLVTHKDTKQ-------QFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~~~~-------~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
+.||+|+||.||+|.++.++. .+|+|.+.... ....+.+..|+.+++.+. ||||+++++++..+...++
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~~~-h~~iv~~~~~~~~~~~~~l 76 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH---RNYSESFFEAASMMSQLS-HKHLVLNYGVCVCGDESIM 76 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh---HHHHHHHHHHHHHHHhCC-CCChhheeeEEEeCCCcEE
Confidence 468999999999999866543 37777764322 233467888999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCC-----CCCeeEeeccccc
Q 010013 146 IMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAE-----DSPLKATDFGLSV 219 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~-----~~~~kl~Dfg~a~ 219 (520)
||||+++|+|.+++...+ .+++..+..++.||+.||.|||++||+||||||+||+++.++. ...++++|||++.
T Consensus 77 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 77 VQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred EEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 999999999999987654 5899999999999999999999999999999999999975322 1237999999987
Q ss_pred ccCCCCcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCC-CCCCCCCHHHHHHHHHcCCCCCCCCCCCCC
Q 010013 220 FFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGV-PPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (520)
Q Consensus 220 ~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~-~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (520)
..... ....+++.|+|||.+.+ .++.++||||||+++|+|++|. .||.......... +......++ ...
T Consensus 157 ~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~-~~~~~~~~~----~~~ 228 (258)
T cd05078 157 TVLPK---EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQ-FYEDRHQLP----APK 228 (258)
T ss_pred ccCCc---hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHH-HHHccccCC----CCC
Confidence 65432 23467889999999864 4788999999999999999984 6665555443332 222222222 234
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 297 SSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 297 ~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
+..+.+++.+||+.+|++|||++++++.
T Consensus 229 ~~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 229 WTELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred cHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 6789999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=294.33 Aligned_cols=246 Identities=22% Similarity=0.383 Sum_probs=203.4
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
..++|++.+.||+|+||.||++.+.. +..+|+|.+.... ...+.+.+|+.+++++. |+||+++++++.. ...+
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~~-~~~~~iK~~~~~~----~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~-~~~~ 76 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYNK-HTKVAVKTMKPGS----MSVEAFLAEANVMKTLQ-HDKLVKLHAVVTK-EPIY 76 (260)
T ss_pred cccceeEEeEecCccceEEEEEEecC-CccEEEEecCCCh----hHHHHHHHHHHHHHhcC-CCCcceEEEEEcC-CCeE
Confidence 35789999999999999999998654 4669999876432 23467889999999998 9999999999877 7789
Q ss_pred EEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 145 LIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
++|||+++++|.+++... ..+++..+..++.|++.||.|||+.|++|+||||+||+++ ..+.+||+|||.+....
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~---~~~~~~l~d~~~~~~~~ 153 (260)
T cd05073 77 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS---ASLVCKIADFGLARVIE 153 (260)
T ss_pred EEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEc---CCCcEEECCCcceeecc
Confidence 999999999999998763 3578889999999999999999999999999999999994 56789999999987654
Q ss_pred CCCcc--cccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCH
Q 010013 223 PGDVF--KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298 (520)
Q Consensus 223 ~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (520)
..... ....++..|+|||.+.. .++.++|+|||||++|++++ |..||.+.........+...... ......+.
T Consensus 154 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 230 (260)
T cd05073 154 DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRM---PRPENCPE 230 (260)
T ss_pred CCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCC---CCcccCCH
Confidence 32211 12235567999998864 47889999999999999999 99999888777766666544221 12246789
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 299 SAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 299 ~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.+.+++.+||+++|++||++.++++
T Consensus 231 ~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 231 ELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred HHHHHHHHHcccCcccCcCHHHHHH
Confidence 9999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-38 Score=301.56 Aligned_cols=248 Identities=25% Similarity=0.417 Sum_probs=197.7
Q ss_pred ceeecceeeccCCeEEEEEEE----cCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--C
Q 010013 68 TYIFGRELGRGQFGVTYLVTH----KDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--H 141 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~----~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~--~ 141 (520)
.|.+.+.||+|+||.||++.. +.++..||+|.+.... .....+.+.+|+.+++++. ||||+++++++... .
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 81 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLY-HENIVKYKGICTEDGGN 81 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc--cHHHHHHHHHHHHHHHhCC-CCCeeeeeeEEecCCCC
Confidence 478899999999999999974 4568899999986432 2334567899999999998 99999999998765 6
Q ss_pred eEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccc
Q 010013 142 SVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 220 (520)
..++||||++|++|.+++.+. ..+++..+..++.||+.||.|||++|++||||||+||+++ .++.++|+|||++..
T Consensus 82 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~---~~~~~~l~dfg~~~~ 158 (284)
T cd05079 82 GIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVE---SEHQVKIGDFGLTKA 158 (284)
T ss_pred ceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEc---CCCCEEECCCccccc
Confidence 789999999999999988664 3589999999999999999999999999999999999994 467799999999987
Q ss_pred cCCCCc----ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhhCCCCCCCCCH---------------HHHHHH
Q 010013 221 FKPGDV----FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETE---------------QSIFDA 280 (520)
Q Consensus 221 ~~~~~~----~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~---------------~~~~~~ 280 (520)
...... .....++..|+|||.+. ..++.++||||||+++|+|+++..|+..... ......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd05079 159 IETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRV 238 (284)
T ss_pred cccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHH
Confidence 643321 12345677899999875 4588999999999999999998766532111 111111
Q ss_pred HHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 281 ILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
+..+. .. ..+..++..+.+|+.+||+.+|++|||+.+++++
T Consensus 239 ~~~~~-~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 239 LEEGK-RL--PRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred HHcCc-cC--CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 22221 11 1234678999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-38 Score=299.80 Aligned_cols=239 Identities=17% Similarity=0.237 Sum_probs=190.6
Q ss_pred eeeccCCeEEEEEEEcCC------------------------CcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCC
Q 010013 74 ELGRGQFGVTYLVTHKDT------------------------KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN 129 (520)
Q Consensus 74 ~lg~G~~g~Vy~~~~~~~------------------------~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~ 129 (520)
.||+|+||.||+|....+ ...+|+|++.... ......+.+|+.+++.+. |||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~~~~l~-h~n 77 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH---RDIALAFFETASLMSQVS-HIH 77 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH---HHHHHHHHHHHHHHhcCC-CCC
Confidence 699999999999985322 2458888875432 223456788999999998 999
Q ss_pred eeEEEEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCC---
Q 010013 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA--- 205 (520)
Q Consensus 130 iv~l~~~~~~~~~~~lv~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~--- 205 (520)
|+++++++......++||||+++++|..++.. .+.+++..+..++.||+.||.|||++||+||||||+|||++..+
T Consensus 78 iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~ 157 (274)
T cd05076 78 LAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAE 157 (274)
T ss_pred eeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCccc
Confidence 99999999999999999999999999888865 45789999999999999999999999999999999999996422
Q ss_pred -CCCCeeEeecccccccCCCCcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHh-hCCCCCCCCCHHHHHHHH
Q 010013 206 -EDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILL-SGVPPFWGETEQSIFDAI 281 (520)
Q Consensus 206 -~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll-~g~~pf~~~~~~~~~~~~ 281 (520)
....+|++|||.+...... ....++..|+|||.+.+ .++.++|||||||++|+++ +|..||...........+
T Consensus 158 ~~~~~~kl~d~g~~~~~~~~---~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~ 234 (274)
T cd05076 158 GTSPFIKLSDPGVSFTALSR---EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERFY 234 (274)
T ss_pred CccceeeecCCccccccccc---cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHHH
Confidence 2335899999988654322 22357888999998854 4789999999999999985 699999877655443332
Q ss_pred HcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 282 LRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
.. ....+ ...++.+.++|.+||+.+|++|||+.++|++
T Consensus 235 ~~-~~~~~----~~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 235 EK-KHRLP----EPSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred Hh-ccCCC----CCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 22 22222 2345789999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=296.75 Aligned_cols=252 Identities=29% Similarity=0.503 Sum_probs=207.8
Q ss_pred ceeecceeeccCCeEEEEEEEcC-CCcEEEEEEeccccc-------CCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKD-TKQQFACKSISSRKL-------INRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~-~~~~~avK~~~~~~~-------~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~ 139 (520)
.|.+.+.||+|+||.||+|.+.. +++.+|+|.+..... ........+.+|+.++.+...||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 37888999999999999999987 678999998753321 1222345677889888764459999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeecCCCCcEEeecCCCCCCeeEee
Q 010013 140 RHSVNLIMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAEDSPLKATD 214 (520)
Q Consensus 140 ~~~~~lv~e~~~g~~L~~~l~~----~~~l~~~~~~~i~~qi~~~l~~LH~-~~ivH~Dlkp~NIll~~~~~~~~~kl~D 214 (520)
.+..++||||++|++|.+++.. ...+++..++.++.|++.||.|||+ .|++|+||+|+||++ +.++.++|+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~---~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIML---GEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEE---CCCCcEEEec
Confidence 9999999999999999887743 3468999999999999999999996 789999999999999 4567899999
Q ss_pred cccccccCCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCC
Q 010013 215 FGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPW 293 (520)
Q Consensus 215 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 293 (520)
||.+.............|+..|+|||.+.+ .++.++||||||+++|+|++|..||...........+........ ..
T Consensus 158 fg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~ 235 (269)
T cd08528 158 FGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPL--PE 235 (269)
T ss_pred ccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcC--Cc
Confidence 999987655444455678999999998864 488999999999999999999999988777666666655443321 12
Q ss_pred CCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 294 PNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 294 ~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
..++..+.+++.+||+.||++||++.++..+
T Consensus 236 ~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 236 GMYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred ccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 3568899999999999999999999998754
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-39 Score=319.19 Aligned_cols=202 Identities=31% Similarity=0.507 Sum_probs=178.5
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC------
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH------ 141 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~------ 141 (520)
.|...+.||+||||.||+++++.+|+.||||.+.... .....++.-+|+++|++|+ |||||++.++-++..
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~--~~r~~e~~~~EieilkKLn-h~NIVk~f~iee~~~~~~~~~ 90 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES--SLRPRERWCREIEILKKLN-HPNIVKLFDIEETKFLGLVTR 90 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhc--ccchHHHHHHHHHHHHHcC-chhhhhhcccCCccccCcccc
Confidence 3555689999999999999999999999999987644 3445688899999999999 999999999865443
Q ss_pred eEEEEEeccCCCchHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCC-CCCCeeEeeccc
Q 010013 142 SVNLIMDLCAGGELFDRIIAK---GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA-EDSPLKATDFGL 217 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~l~~~---~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~-~~~~~kl~Dfg~ 217 (520)
...+|||||.||+|...|.+. ..|++.+++.++..+..||.|||++|||||||||.||++.... .....||+|||.
T Consensus 91 ~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 91 LPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred cceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 466999999999999999653 4699999999999999999999999999999999999987543 455789999999
Q ss_pred ccccCCCCcccccccCCCccCchhhc--ccCCCcchhHHHHHHHHHHhhCCCCCCCC
Q 010013 218 SVFFKPGDVFKDLVGSAYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGE 272 (520)
Q Consensus 218 a~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~Dv~slG~~l~~ll~g~~pf~~~ 272 (520)
|+.+..+......+||+.|.+||++. +.|+.-+|.|||||++|+++||..||...
T Consensus 171 Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~ 227 (732)
T KOG4250|consen 171 ARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPF 227 (732)
T ss_pred cccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcC
Confidence 99998888889999999999999986 56889999999999999999999999554
|
|
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-38 Score=294.17 Aligned_cols=228 Identities=25% Similarity=0.361 Sum_probs=187.7
Q ss_pred cCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCCCchHH
Q 010013 78 GQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFD 157 (520)
Q Consensus 78 G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~g~~L~~ 157 (520)
|.+|.||++.++.+++.+|+|.+.... ...+|...+.... ||||+++++++.....+++||||++|++|.+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~--------~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS--------EYSRERLTIIPHC-VPNMVCLHKYIVSEDSVFLVLQHAEGGKLWS 74 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh--------hhhhHHHHHHhcC-CCceeehhhheecCCeEEEEEecCCCCCHHH
Confidence 899999999999999999999986542 1223444444555 9999999999999999999999999999999
Q ss_pred HHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCcccccccCCCcc
Q 010013 158 RIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV 237 (520)
Q Consensus 158 ~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~ 237 (520)
++.+...+++..+..++.|++.||.|||++|++||||||+||+++ .++.++|+|||.+...... .....++..|+
T Consensus 75 ~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~~l~df~~~~~~~~~--~~~~~~~~~y~ 149 (237)
T cd05576 75 HISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLD---DRGHIQLTYFSRWSEVEDS--CDGEAVENMYC 149 (237)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEc---CCCCEEEecccchhccccc--cccCCcCcccc
Confidence 998888899999999999999999999999999999999999994 5667999999987765432 23345677899
Q ss_pred Cchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC
Q 010013 238 APEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERL 316 (520)
Q Consensus 238 aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp 316 (520)
|||.+.+ .++.++||||+|+++|++++|..|+...... +. ....+. ..+.+++.+.++|.+||+.||++||
T Consensus 150 aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-----~~-~~~~~~--~~~~~~~~~~~li~~~l~~dp~~R~ 221 (237)
T cd05576 150 APEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG-----IN-THTTLN--IPEWVSEEARSLLQQLLQFNPTERL 221 (237)
T ss_pred CCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-----cc-cccccC--CcccCCHHHHHHHHHHccCCHHHhc
Confidence 9998864 4888999999999999999999887543321 00 011111 1135788999999999999999999
Q ss_pred CH-----HHHHcCCcc
Q 010013 317 SA-----AEVLNHPWM 327 (520)
Q Consensus 317 s~-----~~~l~~~~~ 327 (520)
|+ +++++||||
T Consensus 222 ~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 222 GAGVAGVEDIKSHPFF 237 (237)
T ss_pred CCCccchHHHHcCCCC
Confidence 86 999999997
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-37 Score=293.56 Aligned_cols=240 Identities=25% Similarity=0.420 Sum_probs=201.1
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+.+.||+|+||.||++.. +++.+|+|.+... ...+.+.+|+.++++++ ||||+++++++... ..++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~-----~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~-~~~~v 76 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCD-----VTAQAFLEETAVMTKLH-HKNLVRLLGVILHN-GLYIV 76 (254)
T ss_pred HHceeeeeeccCCCCceEeccc--CCCceEEEeecCc-----chHHHHHHHHHHHHhCC-CCCcCeEEEEEcCC-CcEEE
Confidence 5699999999999999999864 5788999988532 13467889999999998 99999999998654 47899
Q ss_pred EeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 147 MDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
|||+++++|.+++.... .+++..+..++.|++.||.|||+.|++||||||+||+++ .++.++|+|||++......
T Consensus 77 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~---~~~~~kl~Dfg~~~~~~~~ 153 (254)
T cd05083 77 MELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVS---EDGVAKVSDFGLARVGSMG 153 (254)
T ss_pred EECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEc---CCCcEEECCCccceecccc
Confidence 99999999999987643 488999999999999999999999999999999999994 5677999999998764322
Q ss_pred CcccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHH
Q 010013 225 DVFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (520)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (520)
......+..|+|||.+. +.++.++|+||||+++|+|++ |..||......+....+..+... .....++..+.+
T Consensus 154 --~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 228 (254)
T cd05083 154 --VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRM---EPPEGCPADVYV 228 (254)
T ss_pred --CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCC---CCCCcCCHHHHH
Confidence 12234456799999876 458899999999999999998 99999888877777766654322 123567899999
Q ss_pred HHHHhcccCCCCCCCHHHHHc
Q 010013 303 IVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 303 li~~~l~~dp~~Rps~~~~l~ 323 (520)
++.+||+.+|++||++.++++
T Consensus 229 li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 229 LMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred HHHHHcCCChhhCcCHHHHHH
Confidence 999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-37 Score=294.75 Aligned_cols=244 Identities=22% Similarity=0.332 Sum_probs=191.6
Q ss_pred ceeeccCCeEEEEEEEcC--CCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEecc
Q 010013 73 RELGRGQFGVTYLVTHKD--TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLC 150 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~--~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~ 150 (520)
+.||+|+||.||+|.... ++..+|+|.+.... .......+.+|+.++++++ ||||+++++++.+....++||||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~ 77 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSA--SVQEQMKFLEEAQPYRSLQ-HSNLLQCLGQCTEVTPYLLVMEFC 77 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhCC-CCCEeeEEEEEcCCCCcEEEEECC
Confidence 468999999999998653 45679999875432 1223356888999999998 999999999999999999999999
Q ss_pred CCCchHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 151 AGGELFDRIIAKG-----HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 151 ~g~~L~~~l~~~~-----~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
++++|.+++.... .+++..+..++.|++.||.|||+.|++|+||||+||+++ .+..+||+|||.+.......
T Consensus 78 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~---~~~~~kL~dfg~~~~~~~~~ 154 (269)
T cd05087 78 PLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLT---ADLTVKIGDYGLSHNKYKED 154 (269)
T ss_pred CCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEc---CCCcEEECCccccccccCcc
Confidence 9999999886532 356778889999999999999999999999999999994 56789999999987543222
Q ss_pred c---ccccccCCCccCchhhcc--------cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHc-CCCCCCCCC
Q 010013 226 V---FKDLVGSAYYVAPEVLRR--------NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILR-GHIDFSSDP 292 (520)
Q Consensus 226 ~---~~~~~gt~~y~aPE~~~~--------~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~-~~~~~~~~~ 292 (520)
. .....+++.|+|||++.+ .++.++||||||+++|+|++ |..||......+....... .....+...
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (269)
T cd05087 155 YYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPR 234 (269)
T ss_pred eeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCc
Confidence 1 123456788999998753 24789999999999999996 9999987665554433222 222222221
Q ss_pred -CCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 293 -WPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 293 -~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
....+..+.+++..|+ .+|++|||+++++.
T Consensus 235 ~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 235 LKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred cCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 1246788999999999 68999999999974
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=314.57 Aligned_cols=279 Identities=25% Similarity=0.411 Sum_probs=229.1
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe----
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED---- 139 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~---- 139 (520)
+-.+.|.|.+.||.|.+|.||++.++.+++..|+|+..... +..+.++.|..+|+.+..|||++.+|++|.-
T Consensus 16 dp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~----d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~ 91 (953)
T KOG0587|consen 16 DPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE----DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPG 91 (953)
T ss_pred CCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc----cccHHHHHHHHHHHhccCCCCcceEEEEEEEecCC
Confidence 34567999999999999999999999999999999986543 3346788999999999999999999998853
Q ss_pred -CCeEEEEEeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecc
Q 010013 140 -RHSVNLIMDLCAGGELFDRIIA--KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (520)
Q Consensus 140 -~~~~~lv~e~~~g~~L~~~l~~--~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg 216 (520)
++.+|+|||||.||+..|+++. ..++.|+.+++|++.++.||.+||++.++|||||-.|||++ .++.|||+|||
T Consensus 92 ~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT---~e~~VKLvDFG 168 (953)
T KOG0587|consen 92 NGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLT---ENAEVKLVDFG 168 (953)
T ss_pred CCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEe---ccCcEEEeeee
Confidence 5789999999999999998876 45799999999999999999999999999999999999995 56679999999
Q ss_pred cccccCCCC-cccccccCCCccCchhhcc------cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC
Q 010013 217 LSVFFKPGD-VFKDLVGSAYYVAPEVLRR------NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289 (520)
Q Consensus 217 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~~------~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~ 289 (520)
.+..+.... ...+.+|||.|||||++.. .|+.++|+||||++..||..|.+|+.+..+...+-.|-+..+ ..
T Consensus 169 vSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNPP-Pk 247 (953)
T KOG0587|consen 169 VSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPP-PK 247 (953)
T ss_pred eeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCCCC-cc
Confidence 998875433 3456789999999999852 377899999999999999999999988777665555544322 22
Q ss_pred CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCCCCCCcccHHHHHHHHHHHhhhHHH
Q 010013 290 SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLK 356 (520)
Q Consensus 290 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 356 (520)
...+...++++.++|..||..|-++||+..++|+|||+.... +..++-..++....+++-.
T Consensus 248 Lkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e~~------~e~qir~~ik~~~~~~r~~ 308 (953)
T KOG0587|consen 248 LKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITEQP------NERQVRIQIKDHIDRSRKK 308 (953)
T ss_pred ccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCcccccc------cHHHHHHHHHHHHhhccch
Confidence 233467789999999999999999999999999999998221 3333444455444444433
|
|
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-37 Score=294.96 Aligned_cols=244 Identities=21% Similarity=0.346 Sum_probs=191.7
Q ss_pred ceeeccCCeEEEEEEEcC--CCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEecc
Q 010013 73 RELGRGQFGVTYLVTHKD--TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLC 150 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~--~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~ 150 (520)
+.||+|+||.||+|.... ....+|+|.+.... .......+.+|+.+++.+. ||||+++++.+.....+++||||+
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~-h~nii~~~~~~~~~~~~~lv~e~~ 77 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASA--TPDEQLLFLQEVQPYRELN-HPNVLQCLGQCIESIPYLLVLEFC 77 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccC--ChHHHHHHHHHHHHHHhCC-CCCcceEEEEECCCCceEEEEEeC
Confidence 469999999999997543 34568888764322 2233456788999999997 999999999999999999999999
Q ss_pred CCCchHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 151 AGGELFDRIIAKG-----HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 151 ~g~~L~~~l~~~~-----~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
++|+|.+++.... ..++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||++.......
T Consensus 78 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~---~~~~~kl~dfg~~~~~~~~~ 154 (269)
T cd05042 78 PLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLT---ADLSVKIGDYGLALEQYPED 154 (269)
T ss_pred CCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEec---CCCcEEEeccccccccccch
Confidence 9999999987643 246778899999999999999999999999999999994 56789999999987543221
Q ss_pred c---ccccccCCCccCchhhcc--------cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcC-CCCCCCC-
Q 010013 226 V---FKDLVGSAYYVAPEVLRR--------NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRG-HIDFSSD- 291 (520)
Q Consensus 226 ~---~~~~~gt~~y~aPE~~~~--------~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~-~~~~~~~- 291 (520)
. .....+++.|+|||++.. .++.++|||||||++|+|++ |..||......+....+... ...++..
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (269)
T cd05042 155 YYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQ 234 (269)
T ss_pred heeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCc
Confidence 1 122345677999998642 36779999999999999999 78899887766655554333 2233222
Q ss_pred CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 292 PWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 292 ~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
....++..+.+++..|+ .||++|||+.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~ 265 (269)
T cd05042 235 LDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE 265 (269)
T ss_pred ccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence 12357888999999998 59999999999986
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=300.66 Aligned_cols=252 Identities=22% Similarity=0.374 Sum_probs=209.9
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
.++...+.++||+|-||.|-+|.... +..||+|.++... +......|.+|+++|.+|+ |||||+++++|..++.++
T Consensus 536 PRs~L~~~ekiGeGqFGEVhLCeveg-~lkVAVK~Lr~~a--~~~~r~~F~kEIkiLsqLk-hPNIveLvGVC~~DePic 611 (807)
T KOG1094|consen 536 PRSRLRFKEKIGEGQFGEVHLCEVEG-PLKVAVKILRPDA--TKNARNDFLKEIKILSRLK-HPNIVELLGVCVQDDPLC 611 (807)
T ss_pred chhheehhhhhcCcccceeEEEEecC-ceEEEEeecCccc--chhHHHHHHHHHHHHhccC-CCCeeEEEeeeecCCchH
Confidence 45667889999999999999998754 6889999997654 3444688999999999997 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 145 LIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
+|+||+++|+|.+++.++. .+.......|+.||+.|++||.+.++|||||.+.|+|+ +.++++||+|||+++.+-
T Consensus 612 mI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv---~~e~~iKiadfgmsR~ly 688 (807)
T KOG1094|consen 612 MITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLV---DGEFTIKIADFGMSRNLY 688 (807)
T ss_pred HHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceee---cCcccEEecCcccccccc
Confidence 9999999999999998873 33456667899999999999999999999999999999 678999999999999776
Q ss_pred CCCccc---ccccCCCccCchhh-cccCCCcchhHHHHHHHHHHhh--CCCCCCCCCHHHHHHHHHcCCCC----CCCCC
Q 010013 223 PGDVFK---DLVGSAYYVAPEVL-RRNYGAEADIWSAGVILYILLS--GVPPFWGETEQSIFDAILRGHID----FSSDP 292 (520)
Q Consensus 223 ~~~~~~---~~~gt~~y~aPE~~-~~~~~~~~Dv~slG~~l~~ll~--g~~pf~~~~~~~~~~~~~~~~~~----~~~~~ 292 (520)
.++.+. ..+-...|||||.+ .+.++.++|||+||+++||+++ ...||....+++..++....... .-...
T Consensus 689 sg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~ 768 (807)
T KOG1094|consen 689 SGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSR 768 (807)
T ss_pred cCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccC
Confidence 555332 23456789999965 6889999999999999999765 78999888888777765332111 11112
Q ss_pred CCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 293 ~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.+-+|..+.+++.+||..+.++|||.+++..
T Consensus 769 P~~cp~~lyelml~Cw~~es~~RPsFe~lh~ 799 (807)
T KOG1094|consen 769 PPACPQGLYELMLRCWRRESEQRPSFEQLHL 799 (807)
T ss_pred CCcCcHHHHHHHHHHhchhhhcCCCHHHHHH
Confidence 3467899999999999999999999999844
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-38 Score=324.07 Aligned_cols=342 Identities=20% Similarity=0.278 Sum_probs=217.0
Q ss_pred cccceeecceeeccCCeEEEEEEEcCC----CcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEE----
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDT----KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGA---- 136 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~----~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~---- 136 (520)
..++|.+.+.||+|+||.||+|.+..+ +..||+|++..... .+....+ .+++.. +.+++.++..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~-----~e~~~~e--~l~~~~-~~~~~~~~~~~~~~ 201 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA-----VEIWMNE--RVRRAC-PNSCADFVYGFLEP 201 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch-----hHHHHHH--HHHhhc-hhhHHHHHHhhhcc
Confidence 346899999999999999999999988 89999998753211 1111111 111111 2222222111
Q ss_pred --EEeCCeEEEEEeccCCCchHHHHHhcCC--------------------CCHHHHHHHHHHHHHHHHHHHHcCCeeecC
Q 010013 137 --YEDRHSVNLIMDLCAGGELFDRIIAKGH--------------------YSERAAANLCRQMVTVVHYCHSMGVMHRDL 194 (520)
Q Consensus 137 --~~~~~~~~lv~e~~~g~~L~~~l~~~~~--------------------l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dl 194 (520)
......+++||||+.+++|.+++..... .....+..++.||+.||.|||++||+||||
T Consensus 202 ~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDL 281 (566)
T PLN03225 202 VSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDV 281 (566)
T ss_pred cccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcC
Confidence 2456789999999999999998865421 123446689999999999999999999999
Q ss_pred CCCcEEeecCCCCCCeeEeecccccccCCCC--cccccccCCCccCchhhcc-----------------------cCCCc
Q 010013 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGD--VFKDLVGSAYYVAPEVLRR-----------------------NYGAE 249 (520)
Q Consensus 195 kp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~-----------------------~~~~~ 249 (520)
||+|||++. .++.+||+|||+++...... ......+++.|+|||.+.. .++.+
T Consensus 282 KP~NILl~~--~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k 359 (566)
T PLN03225 282 KPQNIIFSE--GSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDR 359 (566)
T ss_pred CHHHEEEeC--CCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCC
Confidence 999999952 35679999999998654322 2345678999999996531 13345
Q ss_pred chhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCC-------CC----------CCCCCCCHHHHHHHHHhcccCC
Q 010013 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDF-------SS----------DPWPNISSSAKDIVKKMLHADP 312 (520)
Q Consensus 250 ~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-------~~----------~~~~~~~~~~~~li~~~l~~dp 312 (520)
+|||||||++|+|+++..|+.... ......+....... .. ..+........+||.+||+.||
T Consensus 360 ~DVwSlGviL~el~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP 438 (566)
T PLN03225 360 FDIYSAGLIFLQMAFPNLRSDSNL-IQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKG 438 (566)
T ss_pred cccHHHHHHHHHHHhCcCCCchHH-HHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCc
Confidence 699999999999999776643221 11111111111100 00 0001123345689999999999
Q ss_pred CCCCCHHHHHcCCccccCCCCCCCcccHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHHHHhhHHHHhcccCCCCCCcccH
Q 010013 313 KERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITF 392 (520)
Q Consensus 313 ~~Rps~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~l~~~F~~~D~~~~g~i~~ 392 (520)
++|||+.++|+||||............... ++..... .+.-.+-.+.+...+..-..+.+|-.+.
T Consensus 439 ~kR~ta~e~L~Hpff~~~~~~~~~~~~~~~---~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~e 503 (566)
T PLN03225 439 RQRISAKAALAHPYFDREGLLGLSVMQNLR---LQLFRAT------------QQDYGEAAAWVVFLMAKSGTEKEGGFTE 503 (566)
T ss_pred ccCCCHHHHhCCcCcCCCCccccccccccc---cccchhh------------HHHHHHHHHHHHHHHHhcCCCCCCCccH
Confidence 999999999999999865432111110000 0000000 0000111122334444555667788888
Q ss_pred HHHhhhhhhcCCCCCHHHHH--HHHHHhcCCCCCceehhhhHHH
Q 010013 393 EELKAGLPKLGTRLSESEVR--QLMEAADVDGNGTIDYIEFITA 434 (520)
Q Consensus 393 ~e~~~~l~~~~~~~~~~~~~--~~~~~~d~~~~g~i~~~ef~~~ 434 (520)
.++..+...- .-.+...+ .+-...+.+..|..++.+++.-
T Consensus 504 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (566)
T PLN03225 504 AQLQELREKE--PKKKGSAQRNALASALRLQRKGVKTVARTVDE 545 (566)
T ss_pred HHHHHhhhhc--CcchhhhhhhhHHHHHhhhhhhhhhhhhhhhc
Confidence 8888866543 12233333 3677778888888888888763
|
|
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-37 Score=297.04 Aligned_cols=245 Identities=24% Similarity=0.399 Sum_probs=199.1
Q ss_pred ceeeccCCeEEEEEEEcCCC------cEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 73 RELGRGQFGVTYLVTHKDTK------QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~~~------~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
+.||+|+||.||+|.++... ..+|+|.+.... .......+.+|+.+++.+. ||||+++++++......++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v 77 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA--TDQEKKEFLKEAHLMSNFN-HPNIVKLLGVCLLNEPQYII 77 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc--chhhHHHHHHHHHHHHhcC-CCCeeeEeeeecCCCCeEEE
Confidence 46899999999999986543 679999875432 2234567889999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCC--CCCCeeEeeccc
Q 010013 147 MDLCAGGELFDRIIAK-------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA--EDSPLKATDFGL 217 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~-------~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~--~~~~~kl~Dfg~ 217 (520)
|||+++++|.+++... ..+++..+..++.|++.||.|||+.+++|+||||+||+++.+. ....++|+|||+
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 78 MELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred EeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 9999999999988642 2378899999999999999999999999999999999996533 223799999999
Q ss_pred ccccCCCCc---ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCC
Q 010013 218 SVFFKPGDV---FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDP 292 (520)
Q Consensus 218 a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 292 (520)
+........ .....++..|+|||.+. +.++.++|||||||++|+|++ |..||......+....+..+... ..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~---~~ 234 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGRL---QK 234 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCCcc---CC
Confidence 876543221 11234567899999886 458899999999999999998 99999887776666655443221 12
Q ss_pred CCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 293 ~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
...+|..+.+++.+||..+|++||++.++++
T Consensus 235 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 235 PENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred cccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 2467899999999999999999999999875
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-37 Score=295.20 Aligned_cols=237 Identities=19% Similarity=0.251 Sum_probs=190.4
Q ss_pred ceeeccCCeEEEEEEEcCCC----------cEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 010013 73 RELGRGQFGVTYLVTHKDTK----------QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~~~----------~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~ 142 (520)
+.||+|+||.||+|.++.++ ..+++|.+..... ....+.+|+.+++++. ||||+++++++.. ..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~----~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~-~~ 74 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR----DSLAFFETASLMSQLS-HKHLVKLYGVCVR-DE 74 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchh----hHHHHHHHHHHHHcCC-CcchhheeeEEec-CC
Confidence 46899999999999998776 3477777643321 1567889999999998 9999999999887 77
Q ss_pred EEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCC----CCCCeeEeeccc
Q 010013 143 VNLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA----EDSPLKATDFGL 217 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~----~~~~~kl~Dfg~ 217 (520)
.++||||+++++|.+++.... .+++..+..++.||+.||.|||++||+||||||+||+++... ....+||+|||+
T Consensus 75 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~ 154 (259)
T cd05037 75 NIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI 154 (259)
T ss_pred cEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCc
Confidence 899999999999999998766 799999999999999999999999999999999999996432 112699999999
Q ss_pred ccccCCCCcccccccCCCccCchhhcc---cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCC
Q 010013 218 SVFFKPGDVFKDLVGSAYYVAPEVLRR---NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPW 293 (520)
Q Consensus 218 a~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 293 (520)
+..... .....++..|+|||++.+ .++.++||||||+++|+|++ |..||............... ...+.
T Consensus 155 a~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~~-~~~~~--- 227 (259)
T cd05037 155 PITVLS---REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQDQ-HRLPM--- 227 (259)
T ss_pred cccccc---ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhcC-CCCCC---
Confidence 887543 223456778999999864 47889999999999999999 58888766543333333221 11111
Q ss_pred CCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 294 PNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 294 ~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.....+.+++.+||..+|++|||+.++++
T Consensus 228 -~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 228 -PDCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred -CCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 12378999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-37 Score=300.49 Aligned_cols=247 Identities=23% Similarity=0.344 Sum_probs=200.2
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCc----EEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQ----QFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~----~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~ 142 (520)
.+|+..+.||+|+||.||+|.+..++. .+|+|.+.... .......+.+|+.+++.+. ||||+++++++... .
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~-h~niv~~~~~~~~~-~ 82 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT--GPKANVEFMDEALIMASMD-HPHLVRLLGVCLSP-T 82 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC--CHHHHHHHHHHHHHHHhCC-CCCcccEEEEEcCC-C
Confidence 568888999999999999999887765 46888775432 2233446889999999998 99999999988654 4
Q ss_pred EEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 143 VNLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
.++++||+++|+|.+.+.... .+++..+..++.|++.||.|||++||+|+||||+||+++ .++.+||+|||++...
T Consensus 83 ~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~---~~~~~kL~Dfg~~~~~ 159 (303)
T cd05110 83 IQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVK---SPNHVKITDFGLARLL 159 (303)
T ss_pred ceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeec---CCCceEEccccccccc
Confidence 678999999999999987654 589999999999999999999999999999999999994 4667999999999876
Q ss_pred CCCCc---ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCC
Q 010013 222 KPGDV---FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (520)
Q Consensus 222 ~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (520)
..... .....++..|+|||.+. ..++.++||||||+++|++++ |..||.+.........+..+.. ++. .+.+
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~-~~~--~~~~ 236 (303)
T cd05110 160 EGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGER-LPQ--PPIC 236 (303)
T ss_pred cCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCC-CCC--CCCC
Confidence 43221 11233567899999876 458899999999999999997 9999988776655555544322 221 2456
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 297 SSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 297 ~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
+..+.+++.+||..+|++||++.++++
T Consensus 237 ~~~~~~li~~c~~~~p~~Rp~~~~l~~ 263 (303)
T cd05110 237 TIDVYMVMVKCWMIDADSRPKFKELAA 263 (303)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 889999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-37 Score=293.33 Aligned_cols=242 Identities=24% Similarity=0.375 Sum_probs=193.4
Q ss_pred ceeeccCCeEEEEEEEcC---CCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEE-eCCeEEEEEe
Q 010013 73 RELGRGQFGVTYLVTHKD---TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE-DRHSVNLIMD 148 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~-~~~~~~lv~e 148 (520)
+.||+|+||.||+|.+.. .+..+|+|.+... ......+.+.+|+.+++.+. ||||+++++++. .+...++|||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~lv~e 77 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI--TDLEEVEQFLKEGIIMKDFS-HPNVLSLLGICLPSEGSPLVVLP 77 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCcc--CCHHHHHHHHHHHHHHccCC-CCCcceEEEEeecCCCCcEEEEe
Confidence 468999999999998753 3457999987432 12334567889999999998 999999999765 4566889999
Q ss_pred ccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC--
Q 010013 149 LCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD-- 225 (520)
Q Consensus 149 ~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-- 225 (520)
|+.+++|.+++.+. ..+++..+..++.|++.||.|||+.|++||||||+|||++ .++.+||+|||++.......
T Consensus 78 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~---~~~~~kl~dfg~~~~~~~~~~~ 154 (262)
T cd05058 78 YMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLD---ESFTVKVADFGLARDIYDKEYY 154 (262)
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEc---CCCcEEECCccccccccCCcce
Confidence 99999999998764 3467888899999999999999999999999999999994 56779999999987653221
Q ss_pred ---cccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHH
Q 010013 226 ---VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300 (520)
Q Consensus 226 ---~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (520)
......++..|+|||.+. ..++.++|||||||++|+|++ |.+||...........+..+..... ...++..+
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 231 (262)
T cd05058 155 SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQ---PEYCPDPL 231 (262)
T ss_pred eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCC---CCcCCHHH
Confidence 111234567899999875 458889999999999999999 5677777766666666555432211 13568899
Q ss_pred HHHHHHhcccCCCCCCCHHHHHc
Q 010013 301 KDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 301 ~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.+++.+||..+|++||++.++++
T Consensus 232 ~~li~~cl~~~p~~Rp~~~~il~ 254 (262)
T cd05058 232 YEVMLSCWHPKPEMRPTFSELVS 254 (262)
T ss_pred HHHHHHHcCCChhhCCCHHHHHH
Confidence 99999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-37 Score=296.53 Aligned_cols=248 Identities=25% Similarity=0.415 Sum_probs=195.3
Q ss_pred cceeecceeeccCCeEEEEEEE----cCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe--C
Q 010013 67 NTYIFGRELGRGQFGVTYLVTH----KDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED--R 140 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~----~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~--~ 140 (520)
.+|++.+.||+|+||.||+|.. ..++..||+|.+... .....+.+.+|+++++++. ||||+++++++.. .
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~ 79 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS---TAEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSAGR 79 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhCC-CCCeeEEEEEEccCCC
Confidence 4688999999999999999974 456889999998543 2344567899999999998 9999999997643 4
Q ss_pred CeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccc
Q 010013 141 HSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (520)
Q Consensus 141 ~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~ 219 (520)
..+++||||+++++|.+++... ..+++..+..++.|++.||.|||++|++||||||+||++ +.++.+||+|||++.
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili---~~~~~~~l~dfg~~~ 156 (284)
T cd05081 80 RNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILV---ESENRVKIGDFGLTK 156 (284)
T ss_pred CceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEE---CCCCeEEECCCcccc
Confidence 5689999999999999998764 468999999999999999999999999999999999999 456779999999998
Q ss_pred ccCCCCcc----cccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHH---------------HHH
Q 010013 220 FFKPGDVF----KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQS---------------IFD 279 (520)
Q Consensus 220 ~~~~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~---------------~~~ 279 (520)
........ ....++..|+|||++.+ .++.++||||||+++|+|++|..|+....... ...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05081 157 VLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLI 236 (284)
T ss_pred cccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHH
Confidence 76433211 11223446999998864 58889999999999999999877754332110 001
Q ss_pred HHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 280 AILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.+......++ ....++..+.+++.+||..+|++|||+.++++
T Consensus 237 ~~~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05081 237 ELLKNNGRLP--APPGCPAEIYAIMKECWNNDPSQRPSFSELAL 278 (284)
T ss_pred HHHhcCCcCC--CCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 1111111111 22467899999999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-37 Score=293.01 Aligned_cols=240 Identities=18% Similarity=0.265 Sum_probs=190.2
Q ss_pred ceeeccCCeEEEEEEEcCC------------CcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 010013 73 RELGRGQFGVTYLVTHKDT------------KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~~------------~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~ 140 (520)
+.||+|+||.||+|..... ...+++|.+.... ......+..|+.+++.+. ||||+++++++...
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~l~~l~-hp~iv~~~~~~~~~ 76 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH---RDISLAFFETASMMRQVS-HKHIVLLYGVCVRD 76 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh---hhHHHHHHHHHHHHHhCC-CCCEeeEEEEEecC
Confidence 4689999999999985422 2358888875432 233456788999999998 99999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCC----CCCeeEeec
Q 010013 141 HSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAE----DSPLKATDF 215 (520)
Q Consensus 141 ~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~----~~~~kl~Df 215 (520)
...++||||+++++|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++..+. ...++++||
T Consensus 77 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 77 VENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred CCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 9999999999999998887653 56899999999999999999999999999999999999964221 123899999
Q ss_pred ccccccCCCCcccccccCCCccCchhhc--ccCCCcchhHHHHHHHHHHh-hCCCCCCCCCHHHHHHHHHcCCCCCCCCC
Q 010013 216 GLSVFFKPGDVFKDLVGSAYYVAPEVLR--RNYGAEADIWSAGVILYILL-SGVPPFWGETEQSIFDAILRGHIDFSSDP 292 (520)
Q Consensus 216 g~a~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~Dv~slG~~l~~ll-~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 292 (520)
|++...... ....++..|+|||.+. ..++.++|||||||++|+|+ +|..||......+.. .........
T Consensus 157 g~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~-~~~~~~~~~---- 228 (262)
T cd05077 157 GIPITVLSR---QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE-RFYEGQCML---- 228 (262)
T ss_pred CCCccccCc---ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH-HHHhcCccC----
Confidence 998765322 2346788999999875 35888999999999999998 588888765544332 222222221
Q ss_pred CCCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 293 ~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
....+.++.+++.+||+.||++||++.+++++
T Consensus 229 ~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 229 VTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred CCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 12346789999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=284.15 Aligned_cols=261 Identities=28% Similarity=0.485 Sum_probs=211.6
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe------
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED------ 139 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~------ 139 (520)
.+.|.-..+||+|.||.||+|+.+.+|+.||+|++....-.. -.-....+|+.+|..|. |+|++.+++.|..
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKe-GfpitalreikiL~~lk-Henv~nliEic~tk~Tp~~ 93 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKE-GFPITALREIKILQLLK-HENVVNLIEICRTKATPTN 93 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhcccc-CCcHHHHHHHHHHHHhc-chhHHHHHHHHhhccCCcc
Confidence 355777789999999999999999999999998765322111 11234568999999998 9999999887632
Q ss_pred --CCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecc
Q 010013 140 --RHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (520)
Q Consensus 140 --~~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg 216 (520)
...+|+||.+|+. +|.-.|... .+++..++.+++++++.||.|+|...|+|||+|+.|+|+ +.++.+||+|||
T Consensus 94 r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLI---t~dgilklADFG 169 (376)
T KOG0669|consen 94 RDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLI---TKDGILKLADFG 169 (376)
T ss_pred cccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEE---cCCceEEeeccc
Confidence 3458999999965 777777654 579999999999999999999999999999999999999 567899999999
Q ss_pred cccccCCCC-----cccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC
Q 010013 217 LSVFFKPGD-----VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289 (520)
Q Consensus 217 ~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~ 289 (520)
+++.+..++ .++..+-|..|.+||.+-+ .|+++.|||+.||++.+|.+|.+-+.+.++...+..|..-.....
T Consensus 170 lar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~t 249 (376)
T KOG0669|consen 170 LARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSIT 249 (376)
T ss_pred cccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCC
Confidence 997764322 2345567999999998764 599999999999999999999999999999887777754443333
Q ss_pred CCCCCCC-------------------------------CHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 290 SDPWPNI-------------------------------SSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 290 ~~~~~~~-------------------------------~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
..-||++ ..+..+|+.++|..||.+|+++.++|+|.||..+..
T Consensus 250 kevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~ 323 (376)
T KOG0669|consen 250 KEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPM 323 (376)
T ss_pred cccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCc
Confidence 3333322 246789999999999999999999999999986543
|
|
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-37 Score=297.38 Aligned_cols=249 Identities=16% Similarity=0.206 Sum_probs=185.8
Q ss_pred cccceeecceeeccCCeEEEEEEEcCC---CcEEEEEEecccccCCcccH--------HHHHHHHHHHHhccCCCCeeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDT---KQQFACKSISSRKLINRDDV--------EDVRREVQIMHHLTGHRNIVEL 133 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~~avK~~~~~~~~~~~~~--------~~~~~e~~~l~~l~~hp~iv~l 133 (520)
..++|.+.+.||+|+||.||+|.+..+ +..+|+|+............ .....+...+..+. |++|+++
T Consensus 10 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~-h~~i~~~ 88 (294)
T PHA02882 10 TGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNID-HLGIPKY 88 (294)
T ss_pred CCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCC-CCCCCcE
Confidence 346899999999999999999999877 66777776432211000000 01112233444555 9999999
Q ss_pred EEEEEeCC----eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCC
Q 010013 134 KGAYEDRH----SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP 209 (520)
Q Consensus 134 ~~~~~~~~----~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~ 209 (520)
++++.... ..+++++++. .++.+.+......++..+..++.|++.||.|||+++|+||||||+|||++ .++.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~---~~~~ 164 (294)
T PHA02882 89 YGCGSFKRCRMYYRFILLEKLV-ENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVD---GNNR 164 (294)
T ss_pred EEeeeEecCCceEEEEEEehhc-cCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCc
Confidence 98765443 4567888874 46666666655678899999999999999999999999999999999994 5677
Q ss_pred eeEeecccccccCCCC--------cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCH-HH---
Q 010013 210 LKATDFGLSVFFKPGD--------VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETE-QS--- 276 (520)
Q Consensus 210 ~kl~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~-~~--- 276 (520)
++|+|||+|+.+.... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+... ..
T Consensus 165 ~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~ 244 (294)
T PHA02882 165 GYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIH 244 (294)
T ss_pred EEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHH
Confidence 9999999998653211 1123469999999998865 489999999999999999999999987632 21
Q ss_pred -----HHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 277 -----IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 277 -----~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
....+..+.. ..+..+..+.+++..|+..+|++||++.++++
T Consensus 245 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 245 AAKCDFIKRLHEGKI-----KIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred HhHHHHHHHhhhhhh-----ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 1222222221 23466899999999999999999999999875
|
|
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-37 Score=292.95 Aligned_cols=247 Identities=23% Similarity=0.386 Sum_probs=199.4
Q ss_pred eeecceeeccCCeEEEEEEEcC---CCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC----
Q 010013 69 YIFGRELGRGQFGVTYLVTHKD---TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH---- 141 (520)
Q Consensus 69 y~~~~~lg~G~~g~Vy~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~---- 141 (520)
|.+.+.||+|+||.||+|.++. +++.+|+|++.... ......+.+.+|+++++++. ||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~ 78 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADI-FSSSDIEEFLREAACMKEFD-HPNVIKLIGVSLRSRAKGR 78 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEecccc-CChHHHHHHHHHHHHHhcCC-CCCcceEEEEEccCCCCCc
Confidence 5678899999999999998653 57889999986433 23344677889999999998 999999999876432
Q ss_pred --eEEEEEeccCCCchHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEe
Q 010013 142 --SVNLIMDLCAGGELFDRIIAK------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKAT 213 (520)
Q Consensus 142 --~~~lv~e~~~g~~L~~~l~~~------~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~ 213 (520)
..+++++|+.+++|.+++... ..++...+..++.|++.||.|||++||+||||||+||+++ .+..+||+
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~---~~~~~kl~ 155 (273)
T cd05074 79 LPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLN---ENMTVCVA 155 (273)
T ss_pred ccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEc---CCCCEEEC
Confidence 347889999999998877532 2478899999999999999999999999999999999994 56779999
Q ss_pred ecccccccCCCCc---ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCC
Q 010013 214 DFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDF 288 (520)
Q Consensus 214 Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~ 288 (520)
|||+++....... .....+++.|++||.+.. .++.++||||||+++|+|++ |.+||.+.........+.......
T Consensus 156 dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~ 235 (273)
T cd05074 156 DFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRLK 235 (273)
T ss_pred cccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCcCC
Confidence 9999887543221 122345678999998864 47889999999999999999 899998887777666665543211
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 289 SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 289 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
..+..+..+.+++.+||+.+|++|||+.++++
T Consensus 236 ---~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~ 267 (273)
T cd05074 236 ---QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRD 267 (273)
T ss_pred ---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 11356789999999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-37 Score=294.93 Aligned_cols=248 Identities=27% Similarity=0.428 Sum_probs=199.7
Q ss_pred cceeecceeeccCCeEEEEEEEcC----CCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe--C
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKD----TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED--R 140 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~----~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~--~ 140 (520)
+.|.+.+.||+|+||.||+|.+.. ++..+|+|++...... ...+.+.+|+.+++.+. ||||+++++++.. .
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l~-~~~i~~~~~~~~~~~~ 80 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTLD-HENIVKYKGVCEKPGG 80 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch--HHHHHHHHHHHHHHhCC-CCChheEEeeeecCCC
Confidence 467888999999999999998653 4789999998654321 34577999999999997 9999999999877 5
Q ss_pred CeEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccc
Q 010013 141 HSVNLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (520)
Q Consensus 141 ~~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~ 219 (520)
...++||||+++++|.+++.... .+++..+..++.||+.||.|||++|++|+||||+||+++ .++.++|+|||.+.
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~ 157 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVE---SEDLVKISDFGLAK 157 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEc---CCCCEEEccccccc
Confidence 68999999999999999997654 599999999999999999999999999999999999994 56789999999998
Q ss_pred ccCCCCcc----cccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHH---------------HHH
Q 010013 220 FFKPGDVF----KDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQS---------------IFD 279 (520)
Q Consensus 220 ~~~~~~~~----~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~---------------~~~ 279 (520)
........ ....++..|+|||.+. ..++.++||||||+++++|++|..|+....... ...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05038 158 VLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLE 237 (284)
T ss_pred ccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHH
Confidence 76532211 1223456799999875 458889999999999999999999986543211 122
Q ss_pred HHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 280 AILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.+. .....+. ...++..+.+++.+||+.+|++|||+.++++
T Consensus 238 ~~~-~~~~~~~--~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 238 LLK-EGERLPR--PPSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred HHH-cCCcCCC--CccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 222 2222221 2456789999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=289.40 Aligned_cols=244 Identities=18% Similarity=0.307 Sum_probs=190.5
Q ss_pred ceeeccCCeEEEEEEEcCC--CcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEecc
Q 010013 73 RELGRGQFGVTYLVTHKDT--KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLC 150 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~ 150 (520)
+.||+|+||.||+|..... ...+++|.+.... .....+.+.+|+.+++.++ ||||+++++.+......++||||+
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~-h~~iv~~~~~~~~~~~~~lv~e~~ 77 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANA--SSKEQNEFLQQGDPYRILQ-HPNILQCLGQCVEAIPYLLVFEYC 77 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCC--ChHHHHHHHHHHHHHhccC-CcchhheEEEecCCCccEEEEecC
Confidence 3699999999999976543 2346667654322 1234567899999999998 999999999999999999999999
Q ss_pred CCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC-
Q 010013 151 AGGELFDRIIAK----GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (520)
Q Consensus 151 ~g~~L~~~l~~~----~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~- 225 (520)
++++|.+++.+. ..++...+..++.||+.||.|||+.+++||||||+|||++ .++.++|+|||++.......
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~---~~~~~~l~Dfg~~~~~~~~~~ 154 (268)
T cd05086 78 ELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLT---SDLTVKVGDYGIGPSRYKEDY 154 (268)
T ss_pred CCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEc---CCccEEecccccccccCcchh
Confidence 999999998764 2356777889999999999999999999999999999994 56779999999986432111
Q ss_pred --cccccccCCCccCchhhcc--------cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCC-CCCCC-CC
Q 010013 226 --VFKDLVGSAYYVAPEVLRR--------NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH-IDFSS-DP 292 (520)
Q Consensus 226 --~~~~~~gt~~y~aPE~~~~--------~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~-~~~~~-~~ 292 (520)
......++..|+|||++.. .++.++|||||||++|+|++ |..||......+....+.... ..... ..
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (268)
T cd05086 155 IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQL 234 (268)
T ss_pred hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCcc
Confidence 1123467889999998742 24678999999999999997 577888777766666554432 22222 11
Q ss_pred CCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 293 ~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
...++..+.+++..|| .+|++|||++++++
T Consensus 235 ~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 235 ELPYSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred CCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 2356888999999999 67999999999975
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-38 Score=295.15 Aligned_cols=266 Identities=26% Similarity=0.454 Sum_probs=220.5
Q ss_pred cccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCccc----HHHHHHHHHHHHhccCCCCeeEEEEE
Q 010013 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDD----VEDVRREVQIMHHLTGHRNIVELKGA 136 (520)
Q Consensus 61 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~----~~~~~~e~~~l~~l~~hp~iv~l~~~ 136 (520)
....+.++|.+..+||+|||+.||+|.+....+.||||+......|..+. .+-.-+|..|-+.|. ||.||++|++
T Consensus 457 DHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLD-HpRIVKlYDy 535 (775)
T KOG1151|consen 457 DHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELD-HPRIVKLYDY 535 (775)
T ss_pred cCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccC-cceeeeeeee
Confidence 34456788999999999999999999998888999999876555444332 234567999999998 9999999999
Q ss_pred EE-eCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcC--CeeecCCCCcEEeecCCCCCCeeEe
Q 010013 137 YE-DRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG--VMHRDLKPENFLFSSSAEDSPLKAT 213 (520)
Q Consensus 137 ~~-~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~kl~ 213 (520)
|. +.+..|-|+|||+|.+|.-+|+..+.+++.++..|+.||+.||.||.+.. |||-||||.|||+......+.+||+
T Consensus 536 fslDtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKIT 615 (775)
T KOG1151|consen 536 FSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKIT 615 (775)
T ss_pred eeeccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEee
Confidence 86 45778899999999999999999999999999999999999999999874 9999999999999877777889999
Q ss_pred ecccccccCCCC--------cccccccCCCccCchhhc-c----cCCCcchhHHHHHHHHHHhhCCCCCCCCCHH-HHHH
Q 010013 214 DFGLSVFFKPGD--------VFKDLVGSAYYVAPEVLR-R----NYGAEADIWSAGVILYILLSGVPPFWGETEQ-SIFD 279 (520)
Q Consensus 214 Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~-~----~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~-~~~~ 279 (520)
|||+++.+.... ..+...||.+|++||.+. + ..+.++||||+||++|.++.|+.||...-.+ ++++
T Consensus 616 DFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILq 695 (775)
T KOG1151|consen 616 DFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQ 695 (775)
T ss_pred ecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHh
Confidence 999999874321 123457999999999863 2 2688999999999999999999999765432 3322
Q ss_pred H--H-HcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcccc
Q 010013 280 A--I-LRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 280 ~--~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
. | ......|+.. +.+++++++||++||+..-++|..+.++-.||||..
T Consensus 696 eNTIlkAtEVqFP~K--PvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllP 746 (775)
T KOG1151|consen 696 ENTILKATEVQFPPK--PVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLP 746 (775)
T ss_pred hhchhcceeccCCCC--CccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccc
Confidence 2 2 2223344443 578999999999999999999999999999999974
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-37 Score=298.82 Aligned_cols=254 Identities=28% Similarity=0.452 Sum_probs=212.8
Q ss_pred CCcccccccceeecceeeccCCeEEEEEEEcCC----CcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEE
Q 010013 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDT----KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134 (520)
Q Consensus 59 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~----~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~ 134 (520)
++..+--+....+.+.||+|-||.||.|....- .-.||||..+... +++..+.|..|+.+|+++. ||||++++
T Consensus 381 ~rnyel~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~--t~d~tekflqEa~iMrnfd-HphIikLI 457 (974)
T KOG4257|consen 381 VRNYELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC--TPDDTEKFLQEASIMRNFD-HPHIIKLI 457 (974)
T ss_pred CCcceeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC--ChhhHHHHHHHHHHHHhCC-Ccchhhee
Confidence 333333445556678899999999999987532 3458888876432 4455789999999999999 99999999
Q ss_pred EEEEeCCeEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEe
Q 010013 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKAT 213 (520)
Q Consensus 135 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~ 213 (520)
|++.+ ...+||||+++-|.|..+|..++ .++......++.||+.||.|||+.+.|||||-..|||+. ....+||+
T Consensus 458 Gv~~e-~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVs---Sp~CVKLa 533 (974)
T KOG4257|consen 458 GVCVE-QPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVS---SPQCVKLA 533 (974)
T ss_pred eeeec-cceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeec---Ccceeeec
Confidence 99865 56899999999999999998754 599999999999999999999999999999999999995 45679999
Q ss_pred ecccccccCCCCcccccccC--CCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCC
Q 010013 214 DFGLSVFFKPGDVFKDLVGS--AYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFS 289 (520)
Q Consensus 214 Dfg~a~~~~~~~~~~~~~gt--~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~ 289 (520)
|||+++.+.....+....|. ..|||||.++ ..++.++|||-|||.+||++. |..||.+-...+..-.+.++.....
T Consensus 534 DFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP~ 613 (974)
T KOG4257|consen 534 DFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERLPC 613 (974)
T ss_pred ccchhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCCCC
Confidence 99999998766555544443 4699999998 469999999999999999987 9999999888888777777765433
Q ss_pred CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHH
Q 010013 290 SDPWPNISSSAKDIVKKMLHADPKERLSAAEVL 322 (520)
Q Consensus 290 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l 322 (520)
+ +++|+.+..|+.+||..+|.+||.+.++.
T Consensus 614 P---~nCPp~LYslmskcWayeP~kRPrftei~ 643 (974)
T KOG4257|consen 614 P---PNCPPALYSLMSKCWAYEPSKRPRFTEIK 643 (974)
T ss_pred C---CCCChHHHHHHHHHhccCcccCCcHHHHH
Confidence 3 68999999999999999999999887764
|
|
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-37 Score=304.41 Aligned_cols=251 Identities=24% Similarity=0.360 Sum_probs=212.7
Q ss_pred cceeecceeeccCCeEEEEEEEcCC---CcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDT---KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
+...+.++||+|+||.|++|.|+.- --.||||.+....... ....|.+|+.+|.+|+ |||+++|||+..+ ...
T Consensus 110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~--~mddflrEas~M~~L~-H~hliRLyGvVl~-qp~ 185 (1039)
T KOG0199|consen 110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA--IMDDFLREASHMLKLQ-HPHLIRLYGVVLD-QPA 185 (1039)
T ss_pred HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch--hHHHHHHHHHHHHhcc-CcceeEEeeeecc-chh
Confidence 3466779999999999999999743 2469999997655432 6788999999999999 9999999999877 678
Q ss_pred EEEEeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 144 NLIMDLCAGGELFDRIIA--KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~--~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
.+|||+++.|+|.+.|.+ ...|.......++.||+.|+.||.++++|||||-..|+|+.+ ...|||+|||+.+.+
T Consensus 186 mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllas---prtVKI~DFGLmRaL 262 (1039)
T KOG0199|consen 186 MMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLAS---PRTVKICDFGLMRAL 262 (1039)
T ss_pred hHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecc---cceeeeecccceecc
Confidence 899999999999999987 345888999999999999999999999999999999999953 567999999999998
Q ss_pred CCCCcccccc----cCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCC
Q 010013 222 KPGDVFKDLV----GSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295 (520)
Q Consensus 222 ~~~~~~~~~~----gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (520)
..++..-.+. -...|+|||.++ ..++.++|||++||++|||++ |..||.+.....+++.|..+..-. ..+.
T Consensus 263 g~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~erLp---RPk~ 339 (1039)
T KOG0199|consen 263 GENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGERLP---RPKY 339 (1039)
T ss_pred CCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccccCC---CCCC
Confidence 7665433222 234699999997 569999999999999999999 899999999999999988544322 2257
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 296 ISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 296 ~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
+++.+.+++..||..+|.+|||+..|.+.-+.
T Consensus 340 csedIY~imk~cWah~paDRptFsair~~~~l 371 (1039)
T KOG0199|consen 340 CSEDIYQIMKNCWAHNPADRPTFSAIREDLVL 371 (1039)
T ss_pred ChHHHHHHHHHhccCCccccccHHHHHHhHHH
Confidence 89999999999999999999999998654443
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-36 Score=285.11 Aligned_cols=138 Identities=25% Similarity=0.471 Sum_probs=119.5
Q ss_pred Ccccccc-cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccC-------CCCee
Q 010013 60 KPMEDVR-NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG-------HRNIV 131 (520)
Q Consensus 60 ~~~~~~~-~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~-------hp~iv 131 (520)
..++.+. .+|.+.++||.|-|++||+|.+..+.+.||+|+.+... ...+....||++|++++. ..+||
T Consensus 70 ~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq----hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV 145 (590)
T KOG1290|consen 70 RIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ----HYTEAALDEIKLLQQVREGDPNDPGKKCVV 145 (590)
T ss_pred eccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh----HHHHHHHHHHHHHHHHHhcCCCCCCCceee
Confidence 3445566 89999999999999999999999999999999986543 345677899999999973 24799
Q ss_pred EEEEEEE----eCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH-cCCeeecCCCCcEEee
Q 010013 132 ELKGAYE----DRHSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFS 202 (520)
Q Consensus 132 ~l~~~~~----~~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~-~~ivH~Dlkp~NIll~ 202 (520)
+|++.|. .+.++|+|+|++ |.+|+.++... +.++...+.+|++||+.||.|||. .||||.||||+|||+.
T Consensus 146 ~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 146 QLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC 222 (590)
T ss_pred eeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence 9999985 457899999998 88999998764 469999999999999999999995 6999999999999986
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-37 Score=296.91 Aligned_cols=242 Identities=24% Similarity=0.435 Sum_probs=211.3
Q ss_pred eeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 010013 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMD 148 (520)
Q Consensus 69 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e 148 (520)
.....+||.|.||.||.|.|+.-.-.||||.++.+. -.++.|..|+.+|+.+. |||+|+|+|+|..+...|||+|
T Consensus 269 ItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt----MeveEFLkEAAvMKeik-HpNLVqLLGVCT~EpPFYIiTE 343 (1157)
T KOG4278|consen 269 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIK-HPNLVQLLGVCTHEPPFYIITE 343 (1157)
T ss_pred eeeeeccCCCcccceeeeeeeccceeeehhhhhhcc----hhHHHHHHHHHHHHhhc-CccHHHHhhhhccCCCeEEEEe
Confidence 344578999999999999999888899999986543 35688999999999998 9999999999999999999999
Q ss_pred ccCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCc
Q 010013 149 LCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226 (520)
Q Consensus 149 ~~~g~~L~~~l~~~~~--l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 226 (520)
||..|+|+++|.+..+ ++.-...+++.||..|+.||..+++|||||-..|+|+ +++..+|+.|||+++.+.. +.
T Consensus 344 fM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLV---gEnhiVKvADFGLsRlMtg-DT 419 (1157)
T KOG4278|consen 344 FMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHIVKVADFGLSRLMTG-DT 419 (1157)
T ss_pred cccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccc---cccceEEeeccchhhhhcC-Cc
Confidence 9999999999987543 7777888999999999999999999999999999999 6788899999999998764 34
Q ss_pred ccccccC---CCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHH
Q 010013 227 FKDLVGS---AYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (520)
Q Consensus 227 ~~~~~gt---~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (520)
++...|. ..|.|||.+.- .++.++|||+|||+|||+.| |..||.+.....++..+.++.. ......||+...
T Consensus 420 YTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyR---M~~PeGCPpkVY 496 (1157)
T KOG4278|consen 420 YTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYR---MDGPEGCPPKVY 496 (1157)
T ss_pred eecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhcccc---ccCCCCCCHHHH
Confidence 4444443 46999998874 58999999999999999998 9999999998888887776533 233468999999
Q ss_pred HHHHHhcccCCCCCCCHHHHH
Q 010013 302 DIVKKMLHADPKERLSAAEVL 322 (520)
Q Consensus 302 ~li~~~l~~dp~~Rps~~~~l 322 (520)
+|++.||+.+|.+||+++++-
T Consensus 497 eLMraCW~WsPsDRPsFaeiH 517 (1157)
T KOG4278|consen 497 ELMRACWNWSPSDRPSFAEIH 517 (1157)
T ss_pred HHHHHHhcCCcccCccHHHHH
Confidence 999999999999999999884
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=278.88 Aligned_cols=242 Identities=43% Similarity=0.761 Sum_probs=206.7
Q ss_pred CCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCCCchHHH
Q 010013 79 QFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDR 158 (520)
Q Consensus 79 ~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~g~~L~~~ 158 (520)
+||.||+|.+..+++.+|+|++........ .+.+.+|++.++++. |+||+++++++......++++|++++++|.++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~ 77 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK--RERILREISILKKLK-HPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDL 77 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH--HHHHHHHHHHHHhCC-CCcHHHHHhheeeCCEEEEEEeCCCCCCHHHH
Confidence 589999999998899999999865433211 578999999999996 99999999999999999999999999999999
Q ss_pred HHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCcccccccCCCccC
Q 010013 159 IIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVA 238 (520)
Q Consensus 159 l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~a 238 (520)
+.....++...+..++.+++.++.+||+.|++|+||+|+||+++ .++.++|+|||.+.............++..|+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~---~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 154 (244)
T smart00220 78 LKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLD---EDGHVKLADFGLARQLDPGGLLTTFVGTPEYMA 154 (244)
T ss_pred HHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEEC---CCCcEEEccccceeeeccccccccccCCcCCCC
Confidence 98776799999999999999999999999999999999999995 457899999999988765544456678899999
Q ss_pred chhhc-ccCCCcchhHHHHHHHHHHhhCCCCCCC-CCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC
Q 010013 239 PEVLR-RNYGAEADIWSAGVILYILLSGVPPFWG-ETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERL 316 (520)
Q Consensus 239 PE~~~-~~~~~~~Dv~slG~~l~~ll~g~~pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp 316 (520)
||.+. ..++.++||||||++++++++|..||.. .......+.+......... ....++..+.+++.+||..+|++||
T Consensus 155 pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~p~~Rp 233 (244)
T smart00220 155 PEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPP-PEWKISPEAKDLIRKLLVKDPEKRL 233 (244)
T ss_pred HHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCcc-ccccCCHHHHHHHHHHccCCchhcc
Confidence 99886 4578899999999999999999999987 5555555555544433322 1222789999999999999999999
Q ss_pred CHHHHHcCCcc
Q 010013 317 SAAEVLNHPWM 327 (520)
Q Consensus 317 s~~~~l~~~~~ 327 (520)
++.++++||||
T Consensus 234 ~~~~~~~~~~~ 244 (244)
T smart00220 234 TAEEALQHPFF 244 (244)
T ss_pred CHHHHhhCCCC
Confidence 99999999997
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-37 Score=294.29 Aligned_cols=262 Identities=23% Similarity=0.398 Sum_probs=218.4
Q ss_pred CcccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccC-----CCCeeEEE
Q 010013 60 KPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG-----HRNIVELK 134 (520)
Q Consensus 60 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~-----hp~iv~l~ 134 (520)
..++.+..+|.+....|+|-|++|.+|.+...|+.||||+|..... ..+.=.+|++||++|+. .-|+++++
T Consensus 425 ~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~----M~KtGl~EleiLkKL~~AD~Edk~Hclrl~ 500 (752)
T KOG0670|consen 425 RIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV----MHKTGLKELEILKKLNDADPEDKFHCLRLF 500 (752)
T ss_pred ehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH----HhhhhhHHHHHHHHhhccCchhhhHHHHHH
Confidence 3455677889999999999999999999998899999999975432 23444689999999973 34899999
Q ss_pred EEEEeCCeEEEEEeccCCCchHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCee
Q 010013 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGH---YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLK 211 (520)
Q Consensus 135 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~---l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~k 211 (520)
..|...+++|+|+|-+ ..+|.+.|++.+. |....+..+++||+.||..|-.+||+|.||||+||||+ .....+|
T Consensus 501 r~F~hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVN--E~k~iLK 577 (752)
T KOG0670|consen 501 RHFKHKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVN--ESKNILK 577 (752)
T ss_pred HHhhhcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEec--cCcceee
Confidence 9999999999999987 5589999988764 88899999999999999999999999999999999997 4567899
Q ss_pred EeecccccccCCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCC
Q 010013 212 ATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSS 290 (520)
Q Consensus 212 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~ 290 (520)
|||||.|.....+. .+...-+..|.|||++-| .|+...|+||+||+||||+||+..|.+.+...++...+....+++.
T Consensus 578 LCDfGSA~~~~ene-itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~ 656 (752)
T KOG0670|consen 578 LCDFGSASFASENE-ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPN 656 (752)
T ss_pred eccCcccccccccc-ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcH
Confidence 99999999876554 344555678999998755 6999999999999999999999999999988887776654444332
Q ss_pred CCC-------------------------------------------------CCC-------CHHHHHHHHHhcccCCCC
Q 010013 291 DPW-------------------------------------------------PNI-------SSSAKDIVKKMLHADPKE 314 (520)
Q Consensus 291 ~~~-------------------------------------------------~~~-------~~~~~~li~~~l~~dp~~ 314 (520)
..+ +.+ -..+.+|+.+||..||++
T Consensus 657 KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~K 736 (752)
T KOG0670|consen 657 KMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEK 736 (752)
T ss_pred HHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhh
Confidence 210 001 145889999999999999
Q ss_pred CCCHHHHHcCCcccc
Q 010013 315 RLSAAEVLNHPWMRV 329 (520)
Q Consensus 315 Rps~~~~l~~~~~~~ 329 (520)
|.|+.|+|.||||..
T Consensus 737 Rit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 737 RITVNQALKHPFITE 751 (752)
T ss_pred cCCHHHHhcCCcccC
Confidence 999999999999973
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-37 Score=304.04 Aligned_cols=247 Identities=23% Similarity=0.420 Sum_probs=214.3
Q ss_pred ceeecceeeccCCeEEEEEEEcCCC---cEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTK---QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~---~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
...|.+.||.|.||.||+|+.+..| ..||||.++.- ....+...|..|+.||-++. ||||++|.|+......+.
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~G--ytekqrrdFL~EAsIMGQFd-HPNIIrLEGVVTks~PvM 706 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAG--YTEKQRRDFLSEASIMGQFD-HPNIIRLEGVVTKSKPVM 706 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeeccC--ccHHHHhhhhhhhhhcccCC-CCcEEEEEEEEecCceeE
Confidence 3567889999999999999998655 56999998643 34556678999999999998 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 145 LIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
||+|||++|+|..+|.++ +.++..+..-+++.|+.|++||-+.|+|||||-..|||++ .+..+|++|||+++.+..
T Consensus 707 IiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVN---snLvCKVsDFGLSRvled 783 (996)
T KOG0196|consen 707 IITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVN---SNLVCKVSDFGLSRVLED 783 (996)
T ss_pred EEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeec---cceEEEeccccceeeccc
Confidence 999999999999999764 6799999999999999999999999999999999999994 577899999999998754
Q ss_pred CC--ccccccc--CCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 010013 224 GD--VFKDLVG--SAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (520)
Q Consensus 224 ~~--~~~~~~g--t~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (520)
+. .++...| ..+|.|||.+. ..++.++||||+||+|||.++ |..|||..++++.+..|..+..-.++ .++|
T Consensus 784 d~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPpP---mDCP 860 (996)
T KOG0196|consen 784 DPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPPP---MDCP 860 (996)
T ss_pred CCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCCC---CCCc
Confidence 32 2223333 35799999986 569999999999999999887 99999999999999999887543322 4889
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 298 SSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 298 ~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
..+..|+..||++|-.+||.+.|++.
T Consensus 861 ~aL~qLMldCWqkdR~~RP~F~qiV~ 886 (996)
T KOG0196|consen 861 AALYQLMLDCWQKDRNRRPKFAQIVS 886 (996)
T ss_pred HHHHHHHHHHHHHHhhcCCCHHHHHH
Confidence 99999999999999999999999976
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=304.79 Aligned_cols=248 Identities=30% Similarity=0.461 Sum_probs=199.6
Q ss_pred eeecceeeccCCeE-EEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 010013 69 YIFGRELGRGQFGV-TYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (520)
Q Consensus 69 y~~~~~lg~G~~g~-Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 147 (520)
|.-.+.+|.|+.|+ ||+|... |+.||||.+... ..+...+|+..|+....|||||++++.-.+....||..
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye--~R~VAVKrll~e------~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIal 582 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYE--GREVAVKRLLEE------FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIAL 582 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeC--CceehHHHHhhH------hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEe
Confidence 34456789998887 7999984 689999988543 33677899999999999999999999999999999999
Q ss_pred eccCCCchHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCC--CCCCeeEeeccccccc
Q 010013 148 DLCAGGELFDRIIAKGH----YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA--EDSPLKATDFGLSVFF 221 (520)
Q Consensus 148 e~~~g~~L~~~l~~~~~----l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~--~~~~~kl~Dfg~a~~~ 221 (520)
|.| ..+|.+++..... ......+.++.|++.||++||+.+||||||||+|||+...+ ....++|+|||+++.+
T Consensus 583 ELC-~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 583 ELC-ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred hHh-hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 999 5699999977411 11245678999999999999999999999999999998642 3457999999999988
Q ss_pred CCCCc----ccccccCCCccCchhhccc-CCCcchhHHHHHHHHHHhhC-CCCCCCCCHHHHHHHHHcCCCCCCCCCCCC
Q 010013 222 KPGDV----FKDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSG-VPPFWGETEQSIFDAILRGHIDFSSDPWPN 295 (520)
Q Consensus 222 ~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~Dv~slG~~l~~ll~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (520)
..+.. .....||-+|+|||++... -+..+|||||||++|+.++| ..||...... -.+|..+......-. +.
T Consensus 662 ~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R--~~NIl~~~~~L~~L~-~~ 738 (903)
T KOG1027|consen 662 AGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLER--QANILTGNYTLVHLE-PL 738 (903)
T ss_pred CCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHh--hhhhhcCccceeeec-cC
Confidence 65542 3456799999999999754 56689999999999999985 9999765443 345666665543211 11
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHHcCCccc
Q 010013 296 ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (520)
Q Consensus 296 ~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~ 328 (520)
...++.+||.+|++++|..||+|.++|.||+|=
T Consensus 739 ~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW 771 (903)
T KOG1027|consen 739 PDCEAKDLISRMLNPDPQLRPSATDVLNHPLFW 771 (903)
T ss_pred chHHHHHHHHHhcCCCcccCCCHHHHhCCCccC
Confidence 112899999999999999999999999999994
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=273.24 Aligned_cols=259 Identities=29% Similarity=0.471 Sum_probs=210.9
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR-- 140 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~-- 140 (520)
.++..+|.-.+.+|.|+- .|..+-+.-++++||+|+.... +.+....++..+|...+..+. |+||++++.+|.-.
T Consensus 13 ftv~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~p-f~n~~~akra~rel~l~~~v~-~~nii~l~n~ftP~~~ 89 (369)
T KOG0665|consen 13 FTVPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRP-FQNQTHAKRAYRELKLMKCVN-HKNIISLLNVFTPQKT 89 (369)
T ss_pred eeeeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCc-cccCccchhhhhhhhhhhhhc-ccceeeeeeccCcccc
Confidence 345577888899999998 8888989888999999988654 556666788899999999998 99999999998543
Q ss_pred ----CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecc
Q 010013 141 ----HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (520)
Q Consensus 141 ----~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg 216 (520)
...|+|||++. .+|...+. -.++...+.+|+.|++.|++|||+.||+||||||+||++ ..+..+||.|||
T Consensus 90 l~~~~e~y~v~e~m~-~nl~~vi~--~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv---~~~~~lKi~dfg 163 (369)
T KOG0665|consen 90 LEEFQEVYLVMELMD-ANLCQVIL--MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVV---NSDCTLKILDFG 163 (369)
T ss_pred HHHHHhHHHHHHhhh-hHHHHHHH--HhcchHHHHHHHHHHHHHHHHHHhcceeecccCccccee---cchhheeeccch
Confidence 35889999994 58877776 357889999999999999999999999999999999999 457789999999
Q ss_pred cccccCCCCcccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC-----------
Q 010013 217 LSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG----------- 284 (520)
Q Consensus 217 ~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~----------- 284 (520)
+|+.....-..+..+.|..|.|||++- .++...+||||+||++.||++|...|.+....+.+.++...
T Consensus 164 ~ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~q 243 (369)
T KOG0665|consen 164 LARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQ 243 (369)
T ss_pred hhcccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHH
Confidence 999876665667788999999999874 35899999999999999999999999877654433332110
Q ss_pred --------------------CCCCCCCCCC-------CCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 285 --------------------HIDFSSDPWP-------NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 285 --------------------~~~~~~~~~~-------~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
...++...|+ .-+..+++++.+||..+|++|.|++++|+|||++..
T Consensus 244 L~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~vw 316 (369)
T KOG0665|consen 244 LQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIKVW 316 (369)
T ss_pred hhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeeeee
Confidence 0111111121 123568899999999999999999999999999843
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-35 Score=295.64 Aligned_cols=260 Identities=22% Similarity=0.274 Sum_probs=187.3
Q ss_pred ccccceeecceeeccCCeEEEEEEEc----------------CCCcEEEEEEecccccCC-----------cccHHHHHH
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHK----------------DTKQQFACKSISSRKLIN-----------RDDVEDVRR 116 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~----------------~~~~~~avK~~~~~~~~~-----------~~~~~~~~~ 116 (520)
...++|.+.++||+|+||.||+|.+. ..++.||||.+....... ....+....
T Consensus 142 ~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~v 221 (507)
T PLN03224 142 WSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMV 221 (507)
T ss_pred ccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHH
Confidence 34678999999999999999999752 234679999985322100 001123345
Q ss_pred HHHHHHhccCCCC-----eeEEEEEEEe--------CCeEEEEEeccCCCchHHHHHhcC--------------------
Q 010013 117 EVQIMHHLTGHRN-----IVELKGAYED--------RHSVNLIMDLCAGGELFDRIIAKG-------------------- 163 (520)
Q Consensus 117 e~~~l~~l~~hp~-----iv~l~~~~~~--------~~~~~lv~e~~~g~~L~~~l~~~~-------------------- 163 (520)
|+.++.++. |.+ ++++++++.. .+..++||||+++++|.+++....
T Consensus 222 E~~~l~~l~-~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~ 300 (507)
T PLN03224 222 EAYMCAKIK-RNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDN 300 (507)
T ss_pred HHHHHHHhh-cccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhh
Confidence 777777776 443 4667777643 356899999999999999886421
Q ss_pred ----CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCcccc--cccCCCcc
Q 010013 164 ----HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD--LVGSAYYV 237 (520)
Q Consensus 164 ----~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~--~~gt~~y~ 237 (520)
.+++..+..++.|++.+|.|||+.+|+||||||+|||++ .+..+||+|||++........... ..+++.|+
T Consensus 301 ~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~---~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~ 377 (507)
T PLN03224 301 MPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVT---VDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYS 377 (507)
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEEC---CCCcEEEEeCcCccccccCCccCccccCCCccee
Confidence 235677889999999999999999999999999999994 456799999999976543332222 23478999
Q ss_pred Cchhhccc---------------------C--CCcchhHHHHHHHHHHhhCCC-CCCCCCH-----------HHHHHHHH
Q 010013 238 APEVLRRN---------------------Y--GAEADIWSAGVILYILLSGVP-PFWGETE-----------QSIFDAIL 282 (520)
Q Consensus 238 aPE~~~~~---------------------~--~~~~Dv~slG~~l~~ll~g~~-pf~~~~~-----------~~~~~~~~ 282 (520)
|||.+... + ..+.||||+||++|+|++|.. ||.+... ......+.
T Consensus 378 aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~ 457 (507)
T PLN03224 378 PPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYK 457 (507)
T ss_pred ChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhc
Confidence 99987421 1 124799999999999999876 6643211 01111111
Q ss_pred cCCCCCCCCCCCCCCHHHHHHHHHhcccCC---CCCCCHHHHHcCCcccc
Q 010013 283 RGHIDFSSDPWPNISSSAKDIVKKMLHADP---KERLSAAEVLNHPWMRV 329 (520)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp---~~Rps~~~~l~~~~~~~ 329 (520)
.... ....+..+++..++|+.+||..+| .+|+|+.|+|+||||..
T Consensus 458 ~~~~--~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~ 505 (507)
T PLN03224 458 GQKY--DFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP 505 (507)
T ss_pred ccCC--CcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence 2222 223456788999999999999766 68999999999999964
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=250.91 Aligned_cols=213 Identities=24% Similarity=0.376 Sum_probs=177.9
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.+....+..||+|+||.|-+.++..+|+..|+|.+... .+....+++.+|+.+..+...+|.+|.+||.+.....++|
T Consensus 45 ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~t--vn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwI 122 (282)
T KOG0984|consen 45 ADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRAT--VNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWI 122 (282)
T ss_pred hhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhh--cChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEE
Confidence 34555678899999999999999999999999999643 2344567788999999988889999999999999999999
Q ss_pred EEeccCCCchHH----HHHhcCCCCHHHHHHHHHHHHHHHHHHHHc-CCeeecCCCCcEEeecCCCCCCeeEeecccccc
Q 010013 146 IMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVTVVHYCHSM-GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (520)
Q Consensus 146 v~e~~~g~~L~~----~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 220 (520)
.||.+ ..+|.. .+...+.+++..+-+|+..++.||.|||++ .++|||+||+|||+ +..+.+|+||||++-.
T Consensus 123 cME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLI---n~~GqVKiCDFGIsG~ 198 (282)
T KOG0984|consen 123 CMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILI---NYDGQVKICDFGISGY 198 (282)
T ss_pred eHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEE---ccCCcEEEccccccee
Confidence 99999 446643 334567899999999999999999999975 89999999999999 4577899999999998
Q ss_pred cCCCCcccccccCCCccCchhhc-----ccCCCcchhHHHHHHHHHHhhCCCCCCC-CCHHHHHHHHHcC
Q 010013 221 FKPGDVFKDLVGSAYYVAPEVLR-----RNYGAEADIWSAGVILYILLSGVPPFWG-ETEQSIFDAILRG 284 (520)
Q Consensus 221 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~Dv~slG~~l~~ll~g~~pf~~-~~~~~~~~~~~~~ 284 (520)
+..+-..+-..|...|||||.+. ..|+.++||||||++++||.+++.||.. .++-+.+.++...
T Consensus 199 L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVee 268 (282)
T KOG0984|consen 199 LVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEE 268 (282)
T ss_pred ehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcC
Confidence 87665555567889999999875 2588899999999999999999999954 3444555555543
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=266.41 Aligned_cols=253 Identities=26% Similarity=0.455 Sum_probs=202.8
Q ss_pred ecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC-----eEEE
Q 010013 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH-----SVNL 145 (520)
Q Consensus 71 ~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~-----~~~l 145 (520)
--+.||-|+||.||.+.+..+|+.||+|++.. .+.+-..-+++.+|+++|.-++ |.|++..+++....+ .+|+
T Consensus 57 PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pn-vfq~L~s~krvFre~kmLcfFk-HdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 57 PDRPIGYGAFGVVWSVTDPRSGKRVALKKMPN-VFQNLASCKRVFREIKMLSSFR-HDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCcccccceeEEEeccCCCCccchhHhhcch-HHHHHHHHHHHHHHHHHHHhhc-cccHHHHHHhcCCCCchHHHHHHH
Confidence 34889999999999999999999999998753 2333344577889999999998 999999988775543 3567
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
++|++ ..+|...+...+.++...+.-+++||+.||+|||+.||.||||||.|.|++ .+..+||||||+++.....+
T Consensus 135 ~TELm-QSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVN---SNCvLKICDFGLARvee~d~ 210 (449)
T KOG0664|consen 135 LTELM-QSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVN---SNCILKICDFGLARTWDQRD 210 (449)
T ss_pred HHHHH-HhhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEec---cCceEEecccccccccchhh
Confidence 88888 558888888888999999999999999999999999999999999999994 57889999999999764433
Q ss_pred --cccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHc------------------
Q 010013 226 --VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR------------------ 283 (520)
Q Consensus 226 --~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~------------------ 283 (520)
..+..+-|.+|.|||++.| .|+...||||.||++.||+..+..|...++.+.++.|..
T Consensus 211 ~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk 290 (449)
T KOG0664|consen 211 RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAK 290 (449)
T ss_pred hhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhH
Confidence 2344567889999999875 499999999999999999999999988776555544421
Q ss_pred -----CCCCCCCCC-------CCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcccc
Q 010013 284 -----GHIDFSSDP-------WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 284 -----~~~~~~~~~-------~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
+....+... ...-..+...++.++|.+||++|.+.++++.|++...
T Consensus 291 ~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e 348 (449)
T KOG0664|consen 291 NHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEE 348 (449)
T ss_pred HHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccc
Confidence 111111100 0112345778899999999999999999999999863
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=289.03 Aligned_cols=260 Identities=27% Similarity=0.484 Sum_probs=224.4
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
+.+++|.+..++|+|.||.||+++++.++...|+|+++.. .......+.+|+-+++.++ |||||.+++.|......
T Consensus 12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLe---p~dd~~~iqqei~~~~dc~-h~nivay~gsylr~dkl 87 (829)
T KOG0576|consen 12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLE---PGDDFSGIQQEIGMLRDCR-HPNIVAYFGSYLRRDKL 87 (829)
T ss_pred CCccchhheeeecCCcccchhhhcccccCchhhheeeecc---CCccccccccceeeeecCC-CcChHHHHhhhhhhcCc
Confidence 4567899999999999999999999999999999999643 3455677889999999998 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
++.||||.||+|.+...-.+++++.++...++..++||+|||+.|=+|||||-.|||++ +.+.+|+.|||.+..+..
T Consensus 88 wicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanillt---d~gDvklaDfgvsaqita 164 (829)
T KOG0576|consen 88 WICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLT---DEGDVKLADFGVSAQITA 164 (829)
T ss_pred EEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeec---ccCceeecccCchhhhhh
Confidence 99999999999999888889999999999999999999999999999999999999995 566699999999988754
Q ss_pred CC-cccccccCCCccCchhh----cccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCC-CCCCCCC
Q 010013 224 GD-VFKDLVGSAYYVAPEVL----RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSS-DPWPNIS 297 (520)
Q Consensus 224 ~~-~~~~~~gt~~y~aPE~~----~~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 297 (520)
.- ....++|||.|||||+- ++.|...+|||++|++..|+---++|.........+....+..+..+. ..-...+
T Consensus 165 ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws 244 (829)
T KOG0576|consen 165 TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWS 244 (829)
T ss_pred hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccch
Confidence 32 33568999999999974 467999999999999999998888887776666665555555444332 2223567
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 298 ~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
+.+.+|++.+|..+|++|||++.+|.|||....
T Consensus 245 ~~fh~fvK~altknpKkRptaeklL~h~fvs~~ 277 (829)
T KOG0576|consen 245 EFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT 277 (829)
T ss_pred HHHHHHHHHHhcCCCccCCChhhheeceeeccc
Confidence 889999999999999999999999999999754
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=288.62 Aligned_cols=249 Identities=24% Similarity=0.425 Sum_probs=207.9
Q ss_pred cceeecceeeccCCeEEEEEEEcC-------CCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKD-------TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~-------~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~ 139 (520)
+...+.+.||+|+||.|++|.... ....||||.++.... ....+.+..|+.+|+.+..||||+.+++++..
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~--~~~~~~~~~El~~m~~~g~H~niv~llG~~t~ 373 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENAS--SSEKKDLMSELNVLKELGKHPNIVNLLGACTQ 373 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccC--cHHHHHHHHHHHHHHHhcCCcchhhheeeecc
Confidence 344667799999999999997542 145799998865432 35678899999999999999999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeec
Q 010013 140 RHSVNLIMDLCAGGELFDRIIAKG----------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSS 203 (520)
Q Consensus 140 ~~~~~lv~e~~~g~~L~~~l~~~~----------------~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~ 203 (520)
.+.+++|+||+..|+|.+++...+ .++......++.||+.|+.||++.++|||||-..|||+
T Consensus 374 ~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi-- 451 (609)
T KOG0200|consen 374 DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLI-- 451 (609)
T ss_pred CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEe--
Confidence 999999999999999999998765 38889999999999999999999999999999999999
Q ss_pred CCCCCCeeEeecccccccCCCCccc--cccc--CCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCC-HHH
Q 010013 204 SAEDSPLKATDFGLSVFFKPGDVFK--DLVG--SAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGET-EQS 276 (520)
Q Consensus 204 ~~~~~~~kl~Dfg~a~~~~~~~~~~--~~~g--t~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~-~~~ 276 (520)
..+..+||+|||+|+......... ...| ...|||||.+.. .++.++||||+||+|||+.| |..||.+.. ..+
T Consensus 452 -~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~ 530 (609)
T KOG0200|consen 452 -TKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEE 530 (609)
T ss_pred -cCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHH
Confidence 467889999999999765444332 1222 234999999875 59999999999999999999 999998865 666
Q ss_pred HHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
+.+.+..+.....+ ..++.++.++++.||+.+|++||+..++.+
T Consensus 531 l~~~l~~G~r~~~P---~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 531 LLEFLKEGNRMEQP---EHCSDEIYDLMKSCWNADPEDRPTFSECVE 574 (609)
T ss_pred HHHHHhcCCCCCCC---CCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 66666666543222 467899999999999999999999999865
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=314.80 Aligned_cols=240 Identities=22% Similarity=0.267 Sum_probs=181.9
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
..|...+.||+|+||.||+|.++.++..||+|.+..... ....|++++++++ |||||++++++.+.+..++|
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~l~~l~-HpnIv~~~~~~~~~~~~~lv 761 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-------IPSSEIADMGKLQ-HPNIVKLIGLCRSEKGAYLI 761 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-------ccHHHHHHHhhCC-CCCcceEEEEEEcCCCCEEE
Confidence 345666789999999999999998999999998853221 1234688899998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCH---SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
|||+++|+|.+++. .+++..+..++.|++.||.||| +.+|+||||||+||+++ .+...++. ||.......
T Consensus 762 ~Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~---~~~~~~~~-~~~~~~~~~ 834 (968)
T PLN00113 762 HEYIEGKNLSEVLR---NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIID---GKDEPHLR-LSLPGLLCT 834 (968)
T ss_pred EeCCCCCcHHHHHh---cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEEC---CCCceEEE-ecccccccc
Confidence 99999999999885 4899999999999999999999 66999999999999995 34445554 555443321
Q ss_pred CCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCH-----HHHHHHHHcCC-------CCCCC
Q 010013 224 GDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETE-----QSIFDAILRGH-------IDFSS 290 (520)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~-----~~~~~~~~~~~-------~~~~~ 290 (520)
. ....|++.|+|||++.+ .++.++|||||||++|||++|+.||..... .+......... .....
T Consensus 835 ~---~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (968)
T PLN00113 835 D---TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRG 911 (968)
T ss_pred C---CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccC
Confidence 1 23367899999998864 589999999999999999999999854221 11111100000 00000
Q ss_pred C--CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 291 D--PWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 291 ~--~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
. .......++.+++.+||+.+|++|||+.|+++.
T Consensus 912 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~ 947 (968)
T PLN00113 912 DVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKT 947 (968)
T ss_pred CCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence 0 000112356789999999999999999999874
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-34 Score=266.52 Aligned_cols=256 Identities=27% Similarity=0.458 Sum_probs=202.0
Q ss_pred cccccceeecceeeccCCeEEEEEEEcC---CCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHKD---TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~ 139 (520)
..+...|..+++||+|.|++||++.+.. .++.||+|.+.... .-.++..|+++|..+.++.||+++.+++..
T Consensus 32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-----~p~ri~~El~~L~~~gG~~ni~~~~~~~rn 106 (418)
T KOG1167|consen 32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-----SPSRILNELEMLYRLGGSDNIIKLNGCFRN 106 (418)
T ss_pred hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc-----CchHHHHHHHHHHHhccchhhhcchhhhcc
Confidence 3455779999999999999999998877 78899999885432 236789999999999999999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccc
Q 010013 140 RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (520)
Q Consensus 140 ~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~ 219 (520)
++.+.+|+||++..+..++.. .++...+..+++.++.||.++|.+|||||||||+|+|.+. ..+.-.|+|||+|.
T Consensus 107 nd~v~ivlp~~~H~~f~~l~~---~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~--~t~rg~LvDFgLA~ 181 (418)
T KOG1167|consen 107 NDQVAIVLPYFEHDRFRDLYR---SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNR--RTQRGVLVDFGLAQ 181 (418)
T ss_pred CCeeEEEecccCccCHHHHHh---cCCHHHHHHHHHHHHHHhhhhhccCccccCCCcccccccc--ccCCceEEechhHH
Confidence 999999999999988877664 4678999999999999999999999999999999999974 45668999999987
Q ss_pred ccC-----------------C--C---------------C-----------cccccccCCCccCchhhc--ccCCCcchh
Q 010013 220 FFK-----------------P--G---------------D-----------VFKDLVGSAYYVAPEVLR--RNYGAEADI 252 (520)
Q Consensus 220 ~~~-----------------~--~---------------~-----------~~~~~~gt~~y~aPE~~~--~~~~~~~Dv 252 (520)
... + + . ..-...||++|.|||++- +..++++||
T Consensus 182 ~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDi 261 (418)
T KOG1167|consen 182 RYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDI 261 (418)
T ss_pred HHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccce
Confidence 210 0 0 0 001246999999999985 347889999
Q ss_pred HHHHHHHHHHhhCCCCCCCCCHH-HHHHHH--------------HcCC---------------------------CC---
Q 010013 253 WSAGVILYILLSGVPPFWGETEQ-SIFDAI--------------LRGH---------------------------ID--- 287 (520)
Q Consensus 253 ~slG~~l~~ll~g~~pf~~~~~~-~~~~~~--------------~~~~---------------------------~~--- 287 (520)
||.||+++.++++..||....+. ..+..+ ..+. ..
T Consensus 262 ws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q 341 (418)
T KOG1167|consen 262 WSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQ 341 (418)
T ss_pred eeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccc
Confidence 99999999999999999543220 000000 0000 00
Q ss_pred ---CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccc
Q 010013 288 ---FSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (520)
Q Consensus 288 ---~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~ 328 (520)
.........+..+.+|+.+||..||.+|.|++++|+||||.
T Consensus 342 ~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~ 385 (418)
T KOG1167|consen 342 PNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFD 385 (418)
T ss_pred cceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCc
Confidence 00001123456899999999999999999999999999998
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-34 Score=274.98 Aligned_cols=201 Identities=31% Similarity=0.536 Sum_probs=177.3
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccC-----CcccHHHHHHHHHHHHhcc--CCCCeeEEEEEEEe
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI-----NRDDVEDVRREVQIMHHLT--GHRNIVELKGAYED 139 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~--~hp~iv~l~~~~~~ 139 (520)
..|...+.+|+|+||.|++|.++.+...|+||.|.+.... +...+-.+-.|++||..|+ .|+||++++++|++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 4588999999999999999999999999999999876432 2222334567999999997 48999999999999
Q ss_pred CCeEEEEEecc-CCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccc
Q 010013 140 RHSVNLIMDLC-AGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218 (520)
Q Consensus 140 ~~~~~lv~e~~-~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a 218 (520)
++++||+||-. +|.+|.+++..+..+++.++..|++|++.|+++||+.||||||||-+|+++ +.++.+||+|||.+
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenviv---d~~g~~klidfgsa 717 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIV---DSNGFVKLIDFGSA 717 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEE---ecCCeEEEeeccch
Confidence 99999999965 567999999999999999999999999999999999999999999999999 56889999999999
Q ss_pred cccCCCCcccccccCCCccCchhhccc--CCCcchhHHHHHHHHHHhhCCCCCCC
Q 010013 219 VFFKPGDVFKDLVGSAYYVAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWG 271 (520)
Q Consensus 219 ~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~Dv~slG~~l~~ll~g~~pf~~ 271 (520)
..... ..+..++||..|.|||+++|. .+...|||++|++||.++....||..
T Consensus 718 a~~ks-gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 718 AYTKS-GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred hhhcC-CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 87654 456788999999999999875 57889999999999999999999864
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-34 Score=250.18 Aligned_cols=244 Identities=25% Similarity=0.427 Sum_probs=195.6
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEE-EEEeCCe
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKG-AYEDRHS 142 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~-~~~~~~~ 142 (520)
++.+.|.|.+.||+|.||.+.++.|+.+++.+|+|.++... .....|.+|...--.|..|.||+.-|+ .|+..+.
T Consensus 21 ~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~----tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~ 96 (378)
T KOG1345|consen 21 DLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ----TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDA 96 (378)
T ss_pred chhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch----hhHHHHHHHhccceeeccchhhhHHHHHHhhcCce
Confidence 45688999999999999999999999999999999886432 345789999998888888999998876 4777889
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
+++++||++.|+|.+.+.. ..+.+.....++.|+++||.|||++++||||||.+|||+... +...+||||||.++...
T Consensus 97 YvF~qE~aP~gdL~snv~~-~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~-df~rvKlcDFG~t~k~g 174 (378)
T KOG1345|consen 97 YVFVQEFAPRGDLRSNVEA-AGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDA-DFYRVKLCDFGLTRKVG 174 (378)
T ss_pred EEEeeccCccchhhhhcCc-ccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecC-CccEEEeeecccccccC
Confidence 9999999999999887755 458888999999999999999999999999999999999763 34589999999988643
Q ss_pred CCCcccccccCCCccCchhhc----c--cCCCcchhHHHHHHHHHHhhCCCCCCCCCH--HHH--HHHHHcCCCCCCCCC
Q 010013 223 PGDVFKDLVGSAYYVAPEVLR----R--NYGAEADIWSAGVILYILLSGVPPFWGETE--QSI--FDAILRGHIDFSSDP 292 (520)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~----~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~--~~~--~~~~~~~~~~~~~~~ 292 (520)
. .....--+..|.+||.+. + ...+.+|||.||+++|.++||.+||+.... ... +.+...+...-.+..
T Consensus 175 ~--tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~ 252 (378)
T KOG1345|consen 175 T--TVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKK 252 (378)
T ss_pred c--eehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchh
Confidence 2 222233456799999763 2 257889999999999999999999974332 111 222222222223334
Q ss_pred CCCCCHHHHHHHHHhcccCCCCC
Q 010013 293 WPNISSSAKDIVKKMLHADPKER 315 (520)
Q Consensus 293 ~~~~~~~~~~li~~~l~~dp~~R 315 (520)
+..+++.+..+.++-|.+++++|
T Consensus 253 F~~fs~~a~r~Fkk~lt~~~~dr 275 (378)
T KOG1345|consen 253 FNPFSEKALRLFKKSLTPRFKDR 275 (378)
T ss_pred hcccCHHHHHHHHHhcCCccccc
Confidence 56788999999999999999999
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-33 Score=278.63 Aligned_cols=243 Identities=25% Similarity=0.394 Sum_probs=205.3
Q ss_pred ecceeeccCCeEEEEEEEcCCC----cEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 71 FGRELGRGQFGVTYLVTHKDTK----QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 71 ~~~~lg~G~~g~Vy~~~~~~~~----~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
..+.||+|+||+||+|.+-..| .+||+|++.... .......+..|+-+|.++. |||+++|++++.... +.||
T Consensus 700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t--~~~~s~e~LdeAl~masld-Hpnl~RLLgvc~~s~-~qlv 775 (1177)
T KOG1025|consen 700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFT--SPKASIELLDEALRMASLD-HPNLLRLLGVCMLST-LQLV 775 (1177)
T ss_pred hhceeccccceeEEeeeEecCCceecceeEEEEeeccC--CchhhHHHHHHHHHHhcCC-CchHHHHhhhcccch-HHHH
Confidence 3468999999999999986544 568888876433 3344578899999999998 999999999997665 8899
Q ss_pred EeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 147 MDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
++|+++|+|.+++... ..+.....+.|..||++||.|||++++|||||-..||||. .-.++|+.|||+++...+..
T Consensus 776 tq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVk---sP~hvkitdfgla~ll~~d~ 852 (1177)
T KOG1025|consen 776 TQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVK---SPNHVKITDFGLAKLLAPDE 852 (1177)
T ss_pred HHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeec---CCCeEEEEecchhhccCccc
Confidence 9999999999999775 4688999999999999999999999999999999999995 45679999999999876543
Q ss_pred -ccccccc--CCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHH
Q 010013 226 -VFKDLVG--SAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300 (520)
Q Consensus 226 -~~~~~~g--t~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (520)
.+....| .+.|||-|.+. ..++.++|||||||++|||+| |..|+.+....++.+.+..+.. ++.+ +.++-++
T Consensus 853 ~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geR-LsqP--piCtiDV 929 (1177)
T KOG1025|consen 853 KEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGER-LSQP--PICTIDV 929 (1177)
T ss_pred ccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhcccc-CCCC--CCccHHH
Confidence 2222222 35688888776 569999999999999999999 9999999999999988888776 4443 5788999
Q ss_pred HHHHHHhcccCCCCCCCHHHHHc
Q 010013 301 KDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 301 ~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.-++.+||..|++.||+++++..
T Consensus 930 y~~mvkCwmid~~~rp~fkel~~ 952 (1177)
T KOG1025|consen 930 YMVMVKCWMIDADSRPTFKELAE 952 (1177)
T ss_pred HHHHHHHhccCcccCccHHHHHH
Confidence 99999999999999999988754
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-32 Score=258.63 Aligned_cols=240 Identities=25% Similarity=0.389 Sum_probs=184.6
Q ss_pred eeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhcc-CCCCeeEEEEEEEeCC----eE
Q 010013 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT-GHRNIVELKGAYEDRH----SV 143 (520)
Q Consensus 69 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~-~hp~iv~l~~~~~~~~----~~ 143 (520)
..+.+.||+|.||.||+|... ++.||||++.. ...+.+..|-.|.+-.. .|+||++++++-.... .+
T Consensus 212 l~l~eli~~Grfg~V~KaqL~--~~~VAVKifp~------~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~ey 283 (534)
T KOG3653|consen 212 LQLLELIGRGRFGCVWKAQLD--NRLVAVKIFPE------QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEY 283 (534)
T ss_pred hhhHHHhhcCccceeehhhcc--CceeEEEecCH------HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccce
Confidence 456689999999999999985 48999999854 34467777777766543 4999999998865544 79
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHc---------CCeeecCCCCcEEeecCCCCCCeeEee
Q 010013 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM---------GVMHRDLKPENFLFSSSAEDSPLKATD 214 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~---------~ivH~Dlkp~NIll~~~~~~~~~kl~D 214 (520)
+||++|.+.|+|.++|..+ .+++....+|+.-|+.||+|||+. .|+|||||..|||| ..+.+..|+|
T Consensus 284 wLVt~fh~kGsL~dyL~~n-tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLv---K~DlTccIaD 359 (534)
T KOG3653|consen 284 WLVTEFHPKGSLCDYLKAN-TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLV---KNDLTCCIAD 359 (534)
T ss_pred eEEeeeccCCcHHHHHHhc-cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEE---ccCCcEEeec
Confidence 9999999999999999775 799999999999999999999963 49999999999999 4578899999
Q ss_pred cccccccCCCCc---ccccccCCCccCchhhcccCC-------CcchhHHHHHHHHHHhhCC------------CCCC--
Q 010013 215 FGLSVFFKPGDV---FKDLVGSAYYVAPEVLRRNYG-------AEADIWSAGVILYILLSGV------------PPFW-- 270 (520)
Q Consensus 215 fg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~-------~~~Dv~slG~~l~~ll~g~------------~pf~-- 270 (520)
||+|..+.++.. ....+||.+|||||++.+..+ .+.||||+|.+|||+++.- .||.
T Consensus 360 FGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~e 439 (534)
T KOG3653|consen 360 FGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAE 439 (534)
T ss_pred cceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHH
Confidence 999998865542 234689999999999976432 3589999999999999853 2332
Q ss_pred ---CCCHHHHHHHHHcC--CCCCCCCCCCC--CCHHHHHHHHHhcccCCCCCCCHHHH
Q 010013 271 ---GETEQSIFDAILRG--HIDFSSDPWPN--ISSSAKDIVKKMLHADPKERLSAAEV 321 (520)
Q Consensus 271 ---~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~li~~~l~~dp~~Rps~~~~ 321 (520)
..+..++...+.+. .+.++ ..|.. -...+++.+..||..||+.|.|+.=+
T Consensus 440 vG~hPt~e~mq~~VV~kK~RP~~p-~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv 496 (534)
T KOG3653|consen 440 VGNHPTLEEMQELVVRKKQRPKIP-DAWRKHAGMAVLCETIEECWDHDAEARLTAGCV 496 (534)
T ss_pred hcCCCCHHHHHHHHHhhccCCCCh-hhhhcCccHHHHHHHHHHHcCCchhhhhhhHHH
Confidence 11122333333222 22222 22222 23568899999999999999998543
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-32 Score=255.91 Aligned_cols=249 Identities=22% Similarity=0.356 Sum_probs=190.7
Q ss_pred cccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHh--ccCCCCeeEEEEEEE
Q 010013 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH--LTGHRNIVELKGAYE 138 (520)
Q Consensus 61 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~--l~~hp~iv~l~~~~~ 138 (520)
...++..+..+.+.||+|-||.||+|.++ |..||||++.... ...+.+|.+|.+. |+ |+||+.+++.-.
T Consensus 205 VQRTiarqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srd------E~SWfrEtEIYqTvmLR-HENILgFIaaD~ 275 (513)
T KOG2052|consen 205 VQRTIARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSRD------ERSWFRETEIYQTVMLR-HENILGFIAADN 275 (513)
T ss_pred hHHhhhheeEEEEEecCccccceeecccc--CCceEEEEecccc------hhhhhhHHHHHHHHHhc-cchhhhhhhccc
Confidence 44667888999999999999999999996 5789999986432 2456666666654 46 999999998643
Q ss_pred eC----CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHc--------CCeeecCCCCcEEeecCCC
Q 010013 139 DR----HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM--------GVMHRDLKPENFLFSSSAE 206 (520)
Q Consensus 139 ~~----~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~--------~ivH~Dlkp~NIll~~~~~ 206 (520)
.+ ..+++|++|.+.|||+|+|.+ ..++.+...+++.-++.||+|||.. .|.|||||..|||| ..
T Consensus 276 ~~~gs~TQLwLvTdYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILV---Kk 351 (513)
T KOG2052|consen 276 KDNGSWTQLWLVTDYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KK 351 (513)
T ss_pred cCCCceEEEEEeeecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEE---cc
Confidence 22 358999999999999999988 5899999999999999999999953 49999999999999 46
Q ss_pred CCCeeEeecccccccCCCC-----cccccccCCCccCchhhcccCC-------CcchhHHHHHHHHHHhhC---------
Q 010013 207 DSPLKATDFGLSVFFKPGD-----VFKDLVGSAYYVAPEVLRRNYG-------AEADIWSAGVILYILLSG--------- 265 (520)
Q Consensus 207 ~~~~kl~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~-------~~~Dv~slG~~l~~ll~g--------- 265 (520)
++..-|+|+|+|....... ..+..+||.+|||||++..... ..+||||||.++||+...
T Consensus 352 n~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~ee 431 (513)
T KOG2052|consen 352 NGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEE 431 (513)
T ss_pred CCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehh
Confidence 7889999999998764331 2355789999999999965332 368999999999998753
Q ss_pred -CCCCCCCC-----HHHHHHHHHcCC-CCCCCCCCCCCC--HHHHHHHHHhcccCCCCCCCHHHHH
Q 010013 266 -VPPFWGET-----EQSIFDAILRGH-IDFSSDPWPNIS--SSAKDIVKKMLHADPKERLSAAEVL 322 (520)
Q Consensus 266 -~~pf~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~li~~~l~~dp~~Rps~~~~l 322 (520)
++||.+-- .+++.+-+.-.. .+..+..|...+ ..+..+++.||..+|.-|.|+-.+-
T Consensus 432 y~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriK 497 (513)
T KOG2052|consen 432 YQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIK 497 (513)
T ss_pred hcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHH
Confidence 57875432 233333322222 222333444432 3466889999999999999986553
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.4e-30 Score=234.99 Aligned_cols=211 Identities=42% Similarity=0.732 Sum_probs=184.0
Q ss_pred eeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccCCCc
Q 010013 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGE 154 (520)
Q Consensus 75 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~g~~ 154 (520)
||+|++|.||++....+++.+++|++....... ..+.+.+|+..++.+. |++|+++++++......++++|++.|++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~~~~e~~~~~~ 77 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKLN-HPNIVKLYGVFEDENHLYLVMEYCEGGS 77 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhcC-CCCeeeEeeeeecCCeEEEEEecCCCCc
Confidence 689999999999998889999999986543211 3467899999999998 9999999999999899999999999999
Q ss_pred hHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC-ccccccc
Q 010013 155 LFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD-VFKDLVG 232 (520)
Q Consensus 155 L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~g 232 (520)
|.+++... ..++...+..++.+++.+|.+||+.|++|+||+|.||+++.. +..++|+|||.+....... ......+
T Consensus 78 l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~--~~~~~l~d~~~~~~~~~~~~~~~~~~~ 155 (215)
T cd00180 78 LKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSD--NGKVKLADFGLSKLLTSDKSLLKTIVG 155 (215)
T ss_pred HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCC--CCcEEEecCCceEEccCCcchhhcccC
Confidence 99988776 578999999999999999999999999999999999999531 5679999999998764332 1234567
Q ss_pred CCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhccc
Q 010013 233 SAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310 (520)
Q Consensus 233 t~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 310 (520)
...|++||.+.. ..+.+.|+|++|++++++ ..+.+++.+|+..
T Consensus 156 ~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-----------------------------------~~~~~~l~~~l~~ 200 (215)
T cd00180 156 TPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-----------------------------------PELKDLIRKMLQK 200 (215)
T ss_pred CCCccChhHhcccCCCCchhhhHHHHHHHHHH-----------------------------------HHHHHHHHHHhhC
Confidence 889999999865 678899999999999998 5688999999999
Q ss_pred CCCCCCCHHHHHcCC
Q 010013 311 DPKERLSAAEVLNHP 325 (520)
Q Consensus 311 dp~~Rps~~~~l~~~ 325 (520)
+|++||++.++++|+
T Consensus 201 ~p~~R~~~~~l~~~~ 215 (215)
T cd00180 201 DPEKRPSAKEILEHL 215 (215)
T ss_pred CcccCcCHHHHhhCC
Confidence 999999999999875
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-30 Score=238.92 Aligned_cols=250 Identities=19% Similarity=0.262 Sum_probs=203.8
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCC-----cEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTK-----QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~ 139 (520)
-+.+++....+-+|.||.||.|.+++.+ +.+.+|.++.. ..+-+...+..|...+..+. |||+..+.++...
T Consensus 282 ~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~--AS~iQv~~~L~es~lly~~s-H~nll~V~~V~ie 358 (563)
T KOG1024|consen 282 QRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQH--ASQIQVNLLLQESMLLYGAS-HPNLLSVLGVSIE 358 (563)
T ss_pred hhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhc--ccHHHHHHHHHHHHHHhcCc-CCCccceeEEEee
Confidence 3466777888999999999999887532 34556665432 23445677889999999998 9999999998754
Q ss_pred -CCeEEEEEeccCCCchHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCe
Q 010013 140 -RHSVNLIMDLCAGGELFDRIIAK--------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPL 210 (520)
Q Consensus 140 -~~~~~lv~e~~~g~~L~~~l~~~--------~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~ 210 (520)
....++++.+..-|+|..++... +.++..+...++.|++.|+.|||++|+||.||-..|.++ ++...+
T Consensus 359 ~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvI---dd~LqV 435 (563)
T KOG1024|consen 359 DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVI---DDQLQV 435 (563)
T ss_pred ccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhccee---hhheeE
Confidence 56677889999889999988721 247788889999999999999999999999999999999 567889
Q ss_pred eEeecccccccCCCCcc---cccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCC
Q 010013 211 KATDFGLSVFFKPGDVF---KDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285 (520)
Q Consensus 211 kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~ 285 (520)
||+|=.+++.+-+.+.. ...-....||+||.+. ..|+..+|||||||+||||+| |+.||...++.++..-+..+.
T Consensus 436 kltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGy 515 (563)
T KOG1024|consen 436 KLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGY 515 (563)
T ss_pred EeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccc
Confidence 99999999987665422 2223456799999886 569999999999999999998 999999999888887777664
Q ss_pred CCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 286 IDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 286 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.- ..+ -++|.++..++.-||...|++||+.+|+..
T Consensus 516 Rl-aQP--~NCPDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 516 RL-AQP--FNCPDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred ee-cCC--CCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 42 221 378999999999999999999999999854
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-29 Score=233.24 Aligned_cols=211 Identities=42% Similarity=0.736 Sum_probs=180.4
Q ss_pred eeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 010013 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMD 148 (520)
Q Consensus 69 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e 148 (520)
|.+.+.||+|++|.||++.+..+++.+|+|.+...... ...+.+.+|+..++++. |+|++++++++......++++|
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~~~~~~~v~e 77 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKLK-HPNIVKLYGVFEDPEPLYLVME 77 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhCC-CCChhhheeeeecCCceEEEEe
Confidence 56788999999999999999988899999998754322 24678899999999997 9999999999999999999999
Q ss_pred ccCCCchHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC--
Q 010013 149 LCAGGELFDRIIAKGH-YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD-- 225 (520)
Q Consensus 149 ~~~g~~L~~~l~~~~~-l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-- 225 (520)
++++++|.+++..... +++..+..++.+++.++.+||+.+++|+||+|.||+++ .+..++|+|||.+.......
T Consensus 78 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~---~~~~~~l~d~g~~~~~~~~~~~ 154 (225)
T smart00221 78 YCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLG---MDGLVKLADFGLARFIHRDLAA 154 (225)
T ss_pred ccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEeeCceeeEecCcccc
Confidence 9999999999988766 89999999999999999999999999999999999995 45789999999998875442
Q ss_pred cccccccCCCccCchhh-c-ccCCCcchhHHHHHHHHHHhhCCCCCCC-CC-HHHHHHHHHcCC
Q 010013 226 VFKDLVGSAYYVAPEVL-R-RNYGAEADIWSAGVILYILLSGVPPFWG-ET-EQSIFDAILRGH 285 (520)
Q Consensus 226 ~~~~~~gt~~y~aPE~~-~-~~~~~~~Dv~slG~~l~~ll~g~~pf~~-~~-~~~~~~~~~~~~ 285 (520)
......++..|++||.+ . ..++.++|||+||+++++|++|+.||.. .. ...+.+.+..+.
T Consensus 155 ~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 218 (225)
T smart00221 155 LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWSFGV 218 (225)
T ss_pred cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHhcCC
Confidence 33445678899999987 3 3467799999999999999999999977 33 345666666554
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.5e-30 Score=279.09 Aligned_cols=197 Identities=19% Similarity=0.229 Sum_probs=145.3
Q ss_pred CCeeEEEEEE-------EeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcE
Q 010013 128 RNIVELKGAY-------EDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENF 199 (520)
Q Consensus 128 p~iv~l~~~~-------~~~~~~~lv~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NI 199 (520)
+||+.+++++ .....+++++|++ +++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~Ni 111 (793)
T PLN00181 33 DYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCF 111 (793)
T ss_pred HHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhE
Confidence 5677777766 2224566778877 6699999965 34699999999999999999999999999999999999
Q ss_pred EeecC----------------CCCCCeeEeecccccccCCC-----------------CcccccccCCCccCchhhc-cc
Q 010013 200 LFSSS----------------AEDSPLKATDFGLSVFFKPG-----------------DVFKDLVGSAYYVAPEVLR-RN 245 (520)
Q Consensus 200 ll~~~----------------~~~~~~kl~Dfg~a~~~~~~-----------------~~~~~~~gt~~y~aPE~~~-~~ 245 (520)
|+... +.+..+|++|||+++..... ......+||+.|+|||++. ..
T Consensus 112 Ll~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~ 191 (793)
T PLN00181 112 VMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSS 191 (793)
T ss_pred EEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCC
Confidence 99531 23456788888887643110 0011245889999999876 45
Q ss_pred CCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCC
Q 010013 246 YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325 (520)
Q Consensus 246 ~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~ 325 (520)
++.++|||||||+||||++|.+|+.... .....+..... +... .........++.+||+++|.+|||+.|+|+||
T Consensus 192 ~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~ 266 (793)
T PLN00181 192 SNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRVL--PPQI-LLNWPKEASFCLWLLHPEPSCRPSMSELLQSE 266 (793)
T ss_pred CCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhhc--Chhh-hhcCHHHHHHHHHhCCCChhhCcChHHHhhch
Confidence 8999999999999999999988875322 12222222111 1111 11235567899999999999999999999999
Q ss_pred ccccC
Q 010013 326 WMRVD 330 (520)
Q Consensus 326 ~~~~~ 330 (520)
||...
T Consensus 267 ~~~~~ 271 (793)
T PLN00181 267 FINEP 271 (793)
T ss_pred hhhhh
Confidence 99753
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=217.48 Aligned_cols=247 Identities=21% Similarity=0.336 Sum_probs=193.8
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.-.|+++++||+|+||.++.|.+.-++++||||.-... ...-+++.|.+..+.|.+.++|..+|-+...+.+-.+
T Consensus 27 G~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk-----S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiL 101 (449)
T KOG1165|consen 27 GPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK-----SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNIL 101 (449)
T ss_pred cccceeccccccCcceeeecccccccCceEEEEecccc-----CCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhh
Confidence 34699999999999999999999999999999986533 2345788899999999999999999999888999999
Q ss_pred EEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCC--CCCCeeEeecccccccC
Q 010013 146 IMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA--EDSPLKATDFGLSVFFK 222 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~--~~~~~kl~Dfg~a~~~~ 222 (520)
|+|++ |.+|.|+..- .++++..+++.++.|++.-+.|+|++.+|+|||||+|+|++..+ +...|.|+|||+|+.+.
T Consensus 102 VidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Yr 180 (449)
T KOG1165|consen 102 VIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYR 180 (449)
T ss_pred hhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhc
Confidence 99998 8899998854 55799999999999999999999999999999999999997532 34578999999999886
Q ss_pred CCC--------cccccccCCCccCchhh-cccCCCcchhHHHHHHHHHHhhCCCCCCCCC---HHHHHHHHHcCCCCCC-
Q 010013 223 PGD--------VFKDLVGSAYYVAPEVL-RRNYGAEADIWSAGVILYILLSGVPPFWGET---EQSIFDAILRGHIDFS- 289 (520)
Q Consensus 223 ~~~--------~~~~~~gt~~y~aPE~~-~~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~---~~~~~~~~~~~~~~~~- 289 (520)
... ......||..||+-... +...+++.|+-|||-+++++|-|.+||.+.. ..+.+++|-......+
T Consensus 181 Dp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i 260 (449)
T KOG1165|consen 181 DPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTPI 260 (449)
T ss_pred CccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCCH
Confidence 543 22456799999998854 4568899999999999999999999998854 3444454433222211
Q ss_pred CCCCCCCCHHHHHHHHHhcccCCCCCCCH
Q 010013 290 SDPWPNISSSAKDIVKKMLHADPKERLSA 318 (520)
Q Consensus 290 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~ 318 (520)
.....++|.++..-+.-.=..+-.+-|..
T Consensus 261 ~~Lc~g~P~efa~Yl~yvR~L~F~E~PDY 289 (449)
T KOG1165|consen 261 EVLCEGFPEEFATYLRYVRRLDFFETPDY 289 (449)
T ss_pred HHHHhcCHHHHHHHHHHHHhcCcccCCCH
Confidence 11223556666555555444444444543
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.4e-27 Score=227.38 Aligned_cols=253 Identities=23% Similarity=0.304 Sum_probs=194.2
Q ss_pred ceeecceeeccCCeEEEEEEEcCCC-cEEEEEEecccccCCcccHHHHHHHHHHHHhcc---CCCCeeEEEEEE-EeCCe
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTK-QQFACKSISSRKLINRDDVEDVRREVQIMHHLT---GHRNIVELKGAY-EDRHS 142 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~-~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~---~hp~iv~l~~~~-~~~~~ 142 (520)
+|.+.+.||+|+||.||.|.+..++ ..+|+|.......... ..+..|..++..+. +.+++..+++.+ ..+.+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~---~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP---SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC---ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence 7999999999999999999998764 5788888754322111 26778888888887 346999999999 57889
Q ss_pred EEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCC--CCCeeEeecccc
Q 010013 143 VNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAE--DSPLKATDFGLS 218 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~--~~~~kl~Dfg~a 218 (520)
.++||+.+ |.+|.++.... +.++..++..|+.|++.+|.+||+.|++||||||+|++++.... ...+.|+|||++
T Consensus 96 ~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 96 NFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred eEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99999998 88999977554 57999999999999999999999999999999999999975431 257999999999
Q ss_pred cccC---CCC-------c-ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC
Q 010013 219 VFFK---PGD-------V-FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI 286 (520)
Q Consensus 219 ~~~~---~~~-------~-~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~ 286 (520)
+... ... . .....||..|.++.+..+ ..+++.|+||++.++.+++.|..||...........+.....
T Consensus 175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~ 254 (322)
T KOG1164|consen 175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPR 254 (322)
T ss_pred ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhh
Confidence 9322 110 1 123559999999998765 589999999999999999999999977654322222222221
Q ss_pred CCCCC-CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 287 DFSSD-PWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 287 ~~~~~-~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
..... .....+..+..+...+-..+...+|....+...
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~ 293 (322)
T KOG1164|consen 255 KLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAEL 293 (322)
T ss_pred hhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHH
Confidence 11111 223446778888888877888889988777553
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-27 Score=206.11 Aligned_cols=250 Identities=22% Similarity=0.290 Sum_probs=201.5
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
-+.+.|+++++||+|+||.+|.|....+|..||||+-..... .-.+..|..+.+.|++...|+.+..++.+..+-
T Consensus 12 iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~-----hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~yn 86 (341)
T KOG1163|consen 12 IVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK-----HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYN 86 (341)
T ss_pred eeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC-----CcchhHHHHHHHHhccCCCCchhhhhccccccc
Confidence 355789999999999999999999999999999998754322 135678889999999889999999999999999
Q ss_pred EEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 144 NLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
.+||++. |.+|.+++.- ...++..++.-++-|++.-++|+|.++++||||||+|+|.+-......+.|+|||+|+.+.
T Consensus 87 vlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~ 165 (341)
T KOG1163|consen 87 VLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYR 165 (341)
T ss_pred eeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhc
Confidence 9999998 8899987753 4579999999999999999999999999999999999999766666789999999999864
Q ss_pred CCC--------cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCH---HHHHHHHHcCCCCCC-
Q 010013 223 PGD--------VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETE---QSIFDAILRGHIDFS- 289 (520)
Q Consensus 223 ~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~---~~~~~~~~~~~~~~~- 289 (520)
... .-....||..|.+-...-+ ..+.+.|+-|+|.+|.++..|..||++... ..-++.|.......+
T Consensus 166 d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~i 245 (341)
T KOG1163|consen 166 DIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPI 245 (341)
T ss_pred cccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCH
Confidence 322 1234579999999876543 468899999999999999999999998654 334444544433332
Q ss_pred CCCCCCCCHHHHHHHHHhcccCCCCCCCHH
Q 010013 290 SDPWPNISSSAKDIVKKMLHADPKERLSAA 319 (520)
Q Consensus 290 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ 319 (520)
......+|.++.-.+.-|=..--++-|...
T Consensus 246 e~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ 275 (341)
T KOG1163|consen 246 EVLCKGFPAEFAMYLNYCRGLGFEEKPDYM 275 (341)
T ss_pred HHHhCCCcHHHHHHHHHHhhcCCCCCCcHH
Confidence 223467888988888888766666666543
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=207.26 Aligned_cols=162 Identities=27% Similarity=0.341 Sum_probs=126.6
Q ss_pred CchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCcccccc
Q 010013 153 GELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231 (520)
Q Consensus 153 ~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 231 (520)
|+|.+++.. .+++++..++.++.||+.||.|||+.+ ||+|||+ +.++.+|+ ||.+....... ..
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~---~~~~~~~~--fG~~~~~~~~~----~~ 65 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILL---TWDGLLKL--DGSVAFKTPEQ----SR 65 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeE---cCccceee--ccceEeecccc----CC
Confidence 688998876 456999999999999999999999998 9999999 45667888 99988754322 26
Q ss_pred cCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCH-HHHHHHHHcCCCCCCC---CCCCCCCH--HHHHHH
Q 010013 232 GSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETE-QSIFDAILRGHIDFSS---DPWPNISS--SAKDIV 304 (520)
Q Consensus 232 gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~--~~~~li 304 (520)
|++.|+|||++.+ .++.++|||||||++|+|++|..||..... ......+......... .....++. .+.+++
T Consensus 66 g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 145 (176)
T smart00750 66 VDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFM 145 (176)
T ss_pred CcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHH
Confidence 8999999999864 588999999999999999999999976543 2223333322221111 01122333 699999
Q ss_pred HHhcccCCCCCCCHHHHHcCCcccc
Q 010013 305 KKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 305 ~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
.+||..+|++|||+.++++|+|+..
T Consensus 146 ~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 146 RVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred HHHHhcccccccCHHHHHHHHHHHH
Confidence 9999999999999999999999863
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.1e-26 Score=221.06 Aligned_cols=168 Identities=18% Similarity=0.212 Sum_probs=130.3
Q ss_pred cccccccceeecceeeccCCeEEEEEEEcC-CCcEEEEEEeccccc--CCcccHHHHHHHHHHHHhccCCCCeeE-EEEE
Q 010013 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKD-TKQQFACKSISSRKL--INRDDVEDVRREVQIMHHLTGHRNIVE-LKGA 136 (520)
Q Consensus 61 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~~avK~~~~~~~--~~~~~~~~~~~e~~~l~~l~~hp~iv~-l~~~ 136 (520)
+...+.+.|.+.+.||+|+||+||+|.++. +++.+|||++..... ......+.+.+|+++|+++. |+|++. ++++
T Consensus 12 ~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~-h~~iv~~l~~~ 90 (365)
T PRK09188 12 QIPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVR-GIGVVPQLLAT 90 (365)
T ss_pred ccccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhcc-CCCCCcEEEEc
Confidence 344456789999999999999999999876 678889998753211 12233567999999999998 999884 5542
Q ss_pred EEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecC-CCCcEEeecCCCCCCeeEeec
Q 010013 137 YEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL-KPENFLFSSSAEDSPLKATDF 215 (520)
Q Consensus 137 ~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dl-kp~NIll~~~~~~~~~kl~Df 215 (520)
+..|+||||++|++|.. +. ... ...++.|++.+|.|||++||+|||| ||+|||++ .++.+||+||
T Consensus 91 ----~~~~LVmE~~~G~~L~~-~~---~~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~---~~~~ikLiDF 156 (365)
T PRK09188 91 ----GKDGLVRGWTEGVPLHL-AR---PHG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMG---PDGEAAVIDF 156 (365)
T ss_pred ----CCcEEEEEccCCCCHHH-hC---ccc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEc---CCCCEEEEEC
Confidence 45799999999999963 21 111 1467899999999999999999999 99999994 4567999999
Q ss_pred ccccccCCCC---------cccccccCCCccCchhhc
Q 010013 216 GLSVFFKPGD---------VFKDLVGSAYYVAPEVLR 243 (520)
Q Consensus 216 g~a~~~~~~~---------~~~~~~gt~~y~aPE~~~ 243 (520)
|+|+.+.... ......+++.|.|||.+.
T Consensus 157 GlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~ 193 (365)
T PRK09188 157 QLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALT 193 (365)
T ss_pred ccceecccCcchhhhhhhhhhhhhhccCccCCcccCC
Confidence 9999764322 123457888999999885
|
|
| >COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-25 Score=187.87 Aligned_cols=146 Identities=39% Similarity=0.626 Sum_probs=137.6
Q ss_pred HHhhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccc-hh
Q 010013 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN-RV 441 (520)
Q Consensus 363 i~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~-~~ 441 (520)
.-.+++.++++++.+.|+.+|.|++|.|+..||..+++.+|.++++.++..+|..+|. +.|.|+|.+|+.++.... ..
T Consensus 10 ~~~~~t~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~~ 88 (160)
T COG5126 10 TFTQLTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLKRG 88 (160)
T ss_pred hcccCCHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhccC
Confidence 3578999999999999999999999999999999999999999999999999999999 999999999999988543 55
Q ss_pred hhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHcC
Q 010013 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRKG 509 (520)
Q Consensus 442 ~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~~ 509 (520)
...++++.+|+.||.|+||+|+..||+.+++.+|.. ++++++.+++.+|.|+||.|+|++|++++...
T Consensus 89 ~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~~deev~~ll~~~d~d~dG~i~~~eF~~~~~~~ 157 (160)
T COG5126 89 DKEEELREAFKLFDKDHDGYISIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDGEIDYEEFKKLIKDS 157 (160)
T ss_pred CcHHHHHHHHHHhCCCCCceecHHHHHHHHHhhcccCCHHHHHHHHHhcCCCCCceEeHHHHHHHHhcc
Confidence 678999999999999999999999999999999999 99999999999999999999999999988753
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-27 Score=247.51 Aligned_cols=259 Identities=28% Similarity=0.460 Sum_probs=196.6
Q ss_pred cce-eecceeeccCCeEEEEEEEcCCCcEEEEEEeccc--ccCCc-ccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 010013 67 NTY-IFGRELGRGQFGVTYLVTHKDTKQQFACKSISSR--KLINR-DDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (520)
Q Consensus 67 ~~y-~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~--~~~~~-~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~ 142 (520)
+.| .....+|.|++|.|+.+........++.|..... ..... .....+..|+.+-..+. |||++..+..+.....
T Consensus 317 ~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~-h~~~~e~l~~~~~~~~ 395 (601)
T KOG0590|consen 317 EKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLS-HPNIIETLDIVQEIDG 395 (601)
T ss_pred cccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeeccccc-CCchhhhHHHHhhccc
Confidence 345 3467899999998888887766666666654421 11111 11222666777778887 9999887776655555
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
..-+||||++ +|...+...+.+....+..+++|++.|++|||+.||.|||||++|+++. .++.+||+|||.+....
T Consensus 396 ~~~~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~---~~g~lki~Dfg~~~vf~ 471 (601)
T KOG0590|consen 396 ILQSMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVT---ENGILKIIDFGAASVFR 471 (601)
T ss_pred chhhhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEe---cCCceEEeecCcceeec
Confidence 5555999999 9999999888899999999999999999999999999999999999994 56689999999988764
Q ss_pred CCC-----cccccccCCCccCchhhcc-cCC-CcchhHHHHHHHHHHhhCCCCCCCCCHHHHH--HHHHcCCCC---CCC
Q 010013 223 PGD-----VFKDLVGSAYYVAPEVLRR-NYG-AEADIWSAGVILYILLSGVPPFWGETEQSIF--DAILRGHID---FSS 290 (520)
Q Consensus 223 ~~~-----~~~~~~gt~~y~aPE~~~~-~~~-~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~--~~~~~~~~~---~~~ 290 (520)
... .....+|+..|+|||++.+ .|. ...||||.|+++..|++|+.||......+.. ......... -+.
T Consensus 472 ~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~ 551 (601)
T KOG0590|consen 472 YPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPN 551 (601)
T ss_pred cCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChH
Confidence 322 2345789999999999864 454 4689999999999999999999665443221 111111111 112
Q ss_pred CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 291 DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 291 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
..+..++...+.+|.+||+++|.+|.|+++|++.+||+..
T Consensus 552 ~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i 591 (601)
T KOG0590|consen 552 RLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSI 591 (601)
T ss_pred HHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhc
Confidence 2344678899999999999999999999999999999854
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.7e-24 Score=210.26 Aligned_cols=255 Identities=37% Similarity=0.593 Sum_probs=207.6
Q ss_pred eeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCC-CeeEEEEEEEeCCeEEEEE
Q 010013 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR-NIVELKGAYEDRHSVNLIM 147 (520)
Q Consensus 69 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp-~iv~l~~~~~~~~~~~lv~ 147 (520)
|.+.+.||.|+||.||++.+. ..+++|.+.............+.+|+.++..+. |+ +|+++++.+......++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~ 77 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLN-HPPNIVKLYDFFQDEGSLYLVM 77 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHcc-CCcceeeEEEEEecCCEEEEEE
Confidence 778899999999999999987 678999987655443335678999999999999 65 8999999998888889999
Q ss_pred eccCCCchHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCC-CeeEeecccccccCC
Q 010013 148 DLCAGGELFDRIIAKG---HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDS-PLKATDFGLSVFFKP 223 (520)
Q Consensus 148 e~~~g~~L~~~l~~~~---~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~-~~kl~Dfg~a~~~~~ 223 (520)
+++.++++.+.+.... .++...+..++.|++.++.|+|+.|++|||+||+||++. ... .++++|||.+.....
T Consensus 78 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~---~~~~~~~l~dfg~~~~~~~ 154 (384)
T COG0515 78 EYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLD---RDGRVVKLIDFGLAKLLPD 154 (384)
T ss_pred ecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeec---CCCCeEEEeccCcceecCC
Confidence 9999999997776654 799999999999999999999999999999999999995 344 699999999986543
Q ss_pred CC-------cccccccCCCccCchhhcc----cCCCcchhHHHHHHHHHHhhCCCCCCCCCH----HHHHHHHHcCCCC-
Q 010013 224 GD-------VFKDLVGSAYYVAPEVLRR----NYGAEADIWSAGVILYILLSGVPPFWGETE----QSIFDAILRGHID- 287 (520)
Q Consensus 224 ~~-------~~~~~~gt~~y~aPE~~~~----~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~----~~~~~~~~~~~~~- 287 (520)
.. ......|+..|++||.+.+ ......|+||+|++++++++|..||..... ......+......
T Consensus 155 ~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 234 (384)
T COG0515 155 PGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPS 234 (384)
T ss_pred CCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcc
Confidence 32 2356789999999998864 578899999999999999999999877663 4455555444433
Q ss_pred CCCCCCCCC----CHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 288 FSSDPWPNI----SSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 288 ~~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
......... ...+.+++..++..+|..|.+..+...++|....
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 281 (384)
T COG0515 235 LASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHL 281 (384)
T ss_pred cccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhCc
Confidence 222221222 2578999999999999999999999988766543
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.8e-26 Score=223.31 Aligned_cols=240 Identities=28% Similarity=0.508 Sum_probs=204.9
Q ss_pred eeccCCeEEEEEEE---cCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccC
Q 010013 75 LGRGQFGVTYLVTH---KDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCA 151 (520)
Q Consensus 75 lg~G~~g~Vy~~~~---~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~ 151 (520)
+|.|+||.|+++.- .+.|..+|.|++.+......... ....|..++..++.||.+|++.-.++.+...++++++..
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 78999999998753 34578899999887655443322 556778888888889999999999999999999999999
Q ss_pred CCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCcccccc
Q 010013 152 GGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231 (520)
Q Consensus 152 g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 231 (520)
||.|...+.....+.+.....+...++-++.++|+.+|+|||+|++||++ +.++++++.|||+++..-..+.. +
T Consensus 81 gg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enill---d~~Ghi~~tdfglske~v~~~~~---c 154 (612)
T KOG0603|consen 81 GGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLL---LLEGHIKLTDFGLSKEAVKEKIA---C 154 (612)
T ss_pred cchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceee---cccCccccCCchhhhHhHhhhhc---c
Confidence 99999999888888999999999999999999999999999999999999 67889999999999876543322 8
Q ss_pred cCCCccCchhhcccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccC
Q 010013 232 GSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311 (520)
Q Consensus 232 gt~~y~aPE~~~~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d 311 (520)
||..|||||+++ .....+|.||+|+++++|++|..||.+ ++...|......++. .++..+++++..++..+
T Consensus 155 gt~eymApEI~~-gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p~----~l~~~a~~~~~~l~~r~ 225 (612)
T KOG0603|consen 155 GTYEYRAPEIIN-GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMPR----ELSAEARSLFRQLFKRN 225 (612)
T ss_pred cchhhhhhHhhh-ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCch----hhhHHHHHHHHHHHhhC
Confidence 999999999998 567789999999999999999999988 666677765555544 56788999999999999
Q ss_pred CCCCCC-----HHHHHcCCccccC
Q 010013 312 PKERLS-----AAEVLNHPWMRVD 330 (520)
Q Consensus 312 p~~Rps-----~~~~l~~~~~~~~ 330 (520)
|..|.- +.++++|+||+..
T Consensus 226 p~nrLg~~~~~~~eik~h~f~~~i 249 (612)
T KOG0603|consen 226 PENRLGAGPDGVDEIKQHEFFQSI 249 (612)
T ss_pred HHHHhccCcchhHHHhccchheee
Confidence 999985 5799999999753
|
|
| >KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.5e-24 Score=181.97 Aligned_cols=142 Identities=43% Similarity=0.711 Sum_probs=131.3
Q ss_pred hhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhh----
Q 010013 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVE---- 442 (520)
Q Consensus 367 ~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~---- 442 (520)
++..++.++.++|+.||++++|+|+..||..+++.+|..++++++..++..+|.+++|.|+++||+.++.......
T Consensus 2 ~~~~~~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~ 81 (151)
T KOG0027|consen 2 LSEEQILELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEE 81 (151)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhccccccc
Confidence 4567788999999999999999999999999999999999999999999999999999999999999887543221
Q ss_pred -hHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 443 -REEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 443 -~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..++++.+|+.||.|++|+||.+||+.+|..+|.. +.++++.+++.+|.|+||.|+|+||+++|..
T Consensus 82 ~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~~~~e~~~mi~~~d~d~dg~i~f~ef~~~m~~ 149 (151)
T KOG0027|consen 82 ASSEELKEAFRVFDKDGDGFISASELKKVLTSLGEKLTDEECKEMIREVDVDGDGKVNFEEFVKMMSG 149 (151)
T ss_pred ccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCcCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHhc
Confidence 35589999999999999999999999999999999 8899999999999999999999999999864
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.3e-24 Score=191.76 Aligned_cols=174 Identities=16% Similarity=0.175 Sum_probs=133.5
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHH------HHHHHHHHHhccCCCCeeEEEEEEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGHRNIVELKGAYE 138 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~------~~~e~~~l~~l~~hp~iv~l~~~~~ 138 (520)
+.++|++.+.||.|+||.||++.. ++..+|+|++.......+..... +.+|++.+.++. ||+|..+.+++.
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~-~~GI~~~~d~~~ 105 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVR-SEGLASLNDFYL 105 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHH-HCCCCcceEeee
Confidence 568899999999999999999755 36689999997654434333333 689999999998 999999998866
Q ss_pred eC--------CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCe
Q 010013 139 DR--------HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPL 210 (520)
Q Consensus 139 ~~--------~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~ 210 (520)
.. +..++||||++|.+|.+.. .+++ ....+++.+|..+|+.|++|||+||+||+++ .++ +
T Consensus 106 ~~~~~~~~~~~~~~lvmEyi~G~tL~~~~----~~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~---~~g-i 173 (232)
T PRK10359 106 LAERKTLRYAHTYIMLIEYIEGVELNDMP----EISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVS---KNG-L 173 (232)
T ss_pred ecccccccccCCeEEEEEEECCccHHHhh----hccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEe---CCC-E
Confidence 43 3578999999999997763 2333 3466999999999999999999999999995 344 9
Q ss_pred eEeecccccccCCCCcccccccCCCccCchhhcccCCCcchhHHHHHHHHHHh
Q 010013 211 KATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILL 263 (520)
Q Consensus 211 kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~Dv~slG~~l~~ll 263 (520)
+|+|||............. =++...++.++|+||||+++..+.
T Consensus 174 ~liDfg~~~~~~e~~a~d~----------~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 174 RIIDLSGKRCTAQRKAKDR----------IDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEEECCCcccccchhhHHH----------HHHHhHhcccccccceeEeehHHH
Confidence 9999998775432211110 012344667999999999987654
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-23 Score=187.23 Aligned_cols=142 Identities=20% Similarity=0.213 Sum_probs=111.2
Q ss_pred cceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCccc-----------------------HHHHHHHHHHHHhccCCC
Q 010013 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDD-----------------------VEDVRREVQIMHHLTGHR 128 (520)
Q Consensus 72 ~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~-----------------------~~~~~~e~~~l~~l~~hp 128 (520)
...||+|+||.||+|.+. +|+.||+|++.......... ......|++++.++. ++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~ 79 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLV-TA 79 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHH-HC
Confidence 478999999999999997 79999999997542111110 122345999999997 77
Q ss_pred CeeEEEEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-HHcCCeeecCCCCcEEeecCCCC
Q 010013 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYC-HSMGVMHRDLKPENFLFSSSAED 207 (520)
Q Consensus 129 ~iv~l~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~L-H~~~ivH~Dlkp~NIll~~~~~~ 207 (520)
++.....+... ..+|||||++|+++.......+.++...+..++.|++.+|.+| |+.||+||||||+|||++ +
T Consensus 80 ~v~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~----~ 153 (190)
T cd05147 80 GIPCPEPILLK--SHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH----D 153 (190)
T ss_pred CCCCCcEEEec--CCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE----C
Confidence 76444333222 2379999999987766555567899999999999999999999 799999999999999995 3
Q ss_pred CCeeEeeccccccc
Q 010013 208 SPLKATDFGLSVFF 221 (520)
Q Consensus 208 ~~~kl~Dfg~a~~~ 221 (520)
+.++|+|||+|...
T Consensus 154 ~~v~LiDFG~a~~~ 167 (190)
T cd05147 154 GKLYIIDVSQSVEH 167 (190)
T ss_pred CcEEEEEccccccC
Confidence 56999999999764
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.6e-23 Score=193.41 Aligned_cols=234 Identities=25% Similarity=0.395 Sum_probs=151.7
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccC---------CCCeeEEEEEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG---------HRNIVELKGAYE 138 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~---------hp~iv~l~~~~~ 138 (520)
.+..++.||.|+++.||.+.+..||+.+|+|+............+.+++|.-....+.+ |-.++..++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 45667899999999999999999999999999865554344456777777654444331 223333333321
Q ss_pred ---------eC---C-----eEEEEEeccCCCchHHHHH---hcCC----CCHHHHHHHHHHHHHHHHHHHHcCCeeecC
Q 010013 139 ---------DR---H-----SVNLIMDLCAGGELFDRII---AKGH----YSERAAANLCRQMVTVVHYCHSMGVMHRDL 194 (520)
Q Consensus 139 ---------~~---~-----~~~lv~e~~~g~~L~~~l~---~~~~----l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dl 194 (520)
.. . +.+++|+-+ .++|.+.+. .... +.......+..|+++.+++||..|++|+||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi 171 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDI 171 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEeccc
Confidence 11 1 235677777 457776653 2222 223334556689999999999999999999
Q ss_pred CCCcEEeecCCCCCCeeEeecccccccCCCCcccccccCCCccCchhhcc---------cCCCcchhHHHHHHHHHHhhC
Q 010013 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR---------NYGAEADIWSAGVILYILLSG 265 (520)
Q Consensus 195 kp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~Dv~slG~~l~~ll~g 265 (520)
+|+|+++ +.++.+.|+||+........ ......+..|.+||.... .++.+.|.|+||+++|.|.+|
T Consensus 172 ~~~nfll---~~~G~v~Lg~F~~~~r~g~~--~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~ 246 (288)
T PF14531_consen 172 KPENFLL---DQDGGVFLGDFSSLVRAGTR--YRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCG 246 (288)
T ss_dssp SGGGEEE----TTS-EEE--GGGEEETTEE--EEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHS
T ss_pred ceeeEEE---cCCCCEEEcChHHHeecCce--eeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHc
Confidence 9999999 56788999999887765432 222345578999997632 267789999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCC
Q 010013 266 VPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKER 315 (520)
Q Consensus 266 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R 315 (520)
..||........... .+ ....++|+.++.||..+|+.+|.+|
T Consensus 247 ~lPf~~~~~~~~~~~------~f--~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 247 RLPFGLSSPEADPEW------DF--SRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp S-STCCCGGGSTSGG------GG--TTSS---HHHHHHHHHHT-SSGGGS
T ss_pred cCCCCCCCccccccc------cc--hhcCCcCHHHHHHHHHHccCCcccC
Confidence 999976543221111 11 1223789999999999999999988
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.8e-22 Score=178.04 Aligned_cols=188 Identities=21% Similarity=0.262 Sum_probs=141.3
Q ss_pred eecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCc-ccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 010013 70 IFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR-DDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMD 148 (520)
Q Consensus 70 ~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~-~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e 148 (520)
.+...|++|+||+||.+.. .+..++.+.+.....+.. .....+.+|+++|++|.+|+++++++++ +..+++||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme 78 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS 78 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence 3467899999999997765 467788777654433221 1123578999999999867999999986 34689999
Q ss_pred ccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecC-CCCcEEeecCCCCCCeeEeecccccccCCCCcc
Q 010013 149 LCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL-KPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF 227 (520)
Q Consensus 149 ~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dl-kp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~ 227 (520)
|+.|.+|...+.. . ...++.|++.+|.++|++||+|||| ||+|||++ .++.++|+|||++.........
T Consensus 79 yI~G~~L~~~~~~------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~---~~g~i~LIDFG~A~~~~~~~~~ 148 (218)
T PRK12274 79 YLAGAAMYQRPPR------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQ---EDGSPAVIDFQLAVRGNPRARW 148 (218)
T ss_pred eecCccHHhhhhh------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEc---CCCCEEEEECCCceecCCcchH
Confidence 9999998654321 1 2357889999999999999999999 79999994 4567999999999865433211
Q ss_pred ----c----------ccccCCCccCchhhc--ccCC-CcchhHHHHHHHHHHhhCCCCCCCCC
Q 010013 228 ----K----------DLVGSAYYVAPEVLR--RNYG-AEADIWSAGVILYILLSGVPPFWGET 273 (520)
Q Consensus 228 ----~----------~~~gt~~y~aPE~~~--~~~~-~~~Dv~slG~~l~~ll~g~~pf~~~~ 273 (520)
. ....++.|+.|+... ...+ ...+.++.|+-+|.++|+..++++..
T Consensus 149 ~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 149 MRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 0 113577888888543 1222 56799999999999999999987754
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.7e-23 Score=214.83 Aligned_cols=219 Identities=33% Similarity=0.607 Sum_probs=173.1
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
.+|..++.|..|+||.||.++|+.+.+++|.|+ .+..+ .+++ ++... +.|.+|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~l-------ilRn---ilt~a-~npfvv--------------- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNL-------ILRN---ILTFA-GNPFVV--------------- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhcc-cccch-------hhhc---ccccc-CCccee---------------
Confidence 568889999999999999999999999999954 32221 1111 22222 244444
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC--
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG-- 224 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~-- 224 (520)
|+=...++.-++++... +.+++|||+.||+|||+||+|.++. .-+++|+.|||+++..-..
T Consensus 136 ------gDc~tllk~~g~lPvdm--------vla~Eylh~ygivhrdlkpdnllIT---~mGhiKlTDfgLsk~GLms~a 198 (1205)
T KOG0606|consen 136 ------GDCATLLKNIGPLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLIT---SMGHIKLTDFGLSKKGLMSLA 198 (1205)
T ss_pred ------chhhhhcccCCCCcchh--------hHHhHhhccCCeecCCCCCCcceee---ecccccccchhhhhhhhhhcc
Confidence 33334455555666544 7789999999999999999999995 5778999999998763211
Q ss_pred ------C--------cccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC
Q 010013 225 ------D--------VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289 (520)
Q Consensus 225 ------~--------~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~ 289 (520)
. .-...+|||.|.|||++. ..|+..+|.|++|+++|+++.|..||.+...++++..+......++
T Consensus 199 tnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wp 278 (1205)
T KOG0606|consen 199 TNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWP 278 (1205)
T ss_pred chhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcccc
Confidence 0 112358999999999864 6699999999999999999999999999999999999998888888
Q ss_pred CCCCCCCCHHHHHHHHHhcccCCCCCC---CHHHHHcCCccccC
Q 010013 290 SDPWPNISSSAKDIVKKMLHADPKERL---SAAEVLNHPWMRVD 330 (520)
Q Consensus 290 ~~~~~~~~~~~~~li~~~l~~dp~~Rp---s~~~~l~~~~~~~~ 330 (520)
.. ...++++++++|.++|+.+|..|. .+-++.+|+||+..
T Consensus 279 E~-dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~L 321 (1205)
T KOG0606|consen 279 EE-DEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLL 321 (1205)
T ss_pred cc-CcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeec
Confidence 76 457889999999999999999997 57788899999854
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.9e-22 Score=179.41 Aligned_cols=144 Identities=17% Similarity=0.177 Sum_probs=113.4
Q ss_pred ecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcc-----------------------cHHHHHHHHHHHHhccCC
Q 010013 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRD-----------------------DVEDVRREVQIMHHLTGH 127 (520)
Q Consensus 71 ~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~-----------------------~~~~~~~e~~~l~~l~~h 127 (520)
+.+.||+|++|.||+|.+. +|+.||||++......... ....+.+|...+.++. |
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~ 78 (190)
T cd05145 1 INGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLY-E 78 (190)
T ss_pred CCceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHH-h
Confidence 3578999999999999987 8999999998764211000 0123468999999998 8
Q ss_pred CCeeEEEEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeecCCCCcEEeecCCC
Q 010013 128 RNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAE 206 (520)
Q Consensus 128 p~iv~l~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~ivH~Dlkp~NIll~~~~~ 206 (520)
+++.....+.... .++||||++|+++.........++...+..++.|++.+|.+||+ .||+||||||+||+++
T Consensus 79 ~~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~---- 152 (190)
T cd05145 79 AGVPVPEPILLKK--NVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH---- 152 (190)
T ss_pred CCCCCceEEEecC--CEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE----
Confidence 8875544433322 47999999988665544455678899999999999999999999 9999999999999995
Q ss_pred CCCeeEeecccccccC
Q 010013 207 DSPLKATDFGLSVFFK 222 (520)
Q Consensus 207 ~~~~kl~Dfg~a~~~~ 222 (520)
++.++|+|||++....
T Consensus 153 ~~~~~liDFG~a~~~~ 168 (190)
T cd05145 153 DGKPYIIDVSQAVELD 168 (190)
T ss_pred CCCEEEEEcccceecC
Confidence 4679999999998764
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.5e-22 Score=184.51 Aligned_cols=189 Identities=27% Similarity=0.400 Sum_probs=138.9
Q ss_pred CCCCeeEEEEEEEe---------------------------CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHH
Q 010013 126 GHRNIVELKGAYED---------------------------RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178 (520)
Q Consensus 126 ~hp~iv~l~~~~~~---------------------------~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~ 178 (520)
.|||||++.++|.+ +..+|+||-.++ .+|..++... ..+-....-++.|++
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~-~~s~r~~~~~laQlL 351 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTR-HRSYRTGRVILAQLL 351 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcC-CCchHHHHHHHHHHH
Confidence 59999999887632 235788888774 4888877654 456677788999999
Q ss_pred HHHHHHHHcCCeeecCCCCcEEeecCCC-CCCeeEeecccccccCC-------CCcccccccCCCccCchhhcccC----
Q 010013 179 TVVHYCHSMGVMHRDLKPENFLFSSSAE-DSPLKATDFGLSVFFKP-------GDVFKDLVGSAYYVAPEVLRRNY---- 246 (520)
Q Consensus 179 ~~l~~LH~~~ivH~Dlkp~NIll~~~~~-~~~~kl~Dfg~a~~~~~-------~~~~~~~~gt~~y~aPE~~~~~~---- 246 (520)
+|+.|||.+||.|||+|.+|||+.-+++ -..+.|+|||.+-.-.. ........|.-..||||+.....
T Consensus 352 Eav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~a 431 (598)
T KOG4158|consen 352 EAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNA 431 (598)
T ss_pred HHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCce
Confidence 9999999999999999999999976533 34678899998654321 01122345778899999985322
Q ss_pred ---CCcchhHHHHHHHHHHhhCCCCCCCCCHHHHH-HHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHH
Q 010013 247 ---GAEADIWSAGVILYILLSGVPPFWGETEQSIF-DAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAA 319 (520)
Q Consensus 247 ---~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ 319 (520)
-.++|.|+.|.+.||++....||.+..+..+- ....+... + .....+++.+++++..+|+.||++|++..
T Consensus 432 vvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qL--P-alp~~vpp~~rqlV~~lL~r~pskRvsp~ 505 (598)
T KOG4158|consen 432 VVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQL--P-ALPSRVPPVARQLVFDLLKRDPSKRVSPN 505 (598)
T ss_pred eeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhC--C-CCcccCChHHHHHHHHHhcCCccccCCcc
Confidence 24799999999999999999999885432211 11111111 1 12257889999999999999999999853
|
|
| >KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.6e-21 Score=156.64 Aligned_cols=144 Identities=33% Similarity=0.562 Sum_probs=134.9
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhh-ccchhhh
Q 010013 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM-HMNRVER 443 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~-~~~~~~~ 443 (520)
..+++++.++++..|..||.+++|+|+..||+.+++++|..+.++++.+++..+|+++.|.|+|++|...+. .+...++
T Consensus 25 ~~l~~~q~q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~dt 104 (172)
T KOG0028|consen 25 SELTEEQKQEIKEAFELFDPDMAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGERDT 104 (172)
T ss_pred ccccHHHHhhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhccCc
Confidence 356778888999999999999999999999999999999999999999999999999999999999999765 3445568
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.+++..+|+.+|.|++|+|+..+|+.+.+.+|.. +++++.+++.++|.++||.|+-+||..+|++
T Consensus 105 ~eEi~~afrl~D~D~~Gkis~~~lkrvakeLgenltD~El~eMIeEAd~d~dgevneeEF~~imk~ 170 (172)
T KOG0028|consen 105 KEEIKKAFRLFDDDKTGKISQRNLKRVAKELGENLTDEELMEMIEEADRDGDGEVNEEEFIRIMKK 170 (172)
T ss_pred HHHHHHHHHcccccCCCCcCHHHHHHHHHHhCccccHHHHHHHHHHhcccccccccHHHHHHHHhc
Confidence 9999999999999999999999999999999998 9999999999999999999999999999875
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.1e-22 Score=174.89 Aligned_cols=239 Identities=18% Similarity=0.241 Sum_probs=185.4
Q ss_pred eeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 010013 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMD 148 (520)
Q Consensus 69 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e 148 (520)
..+..+|.+.-.|..|+|++..+ .+++|++..+.. .......|..|.-.|+-+. ||||+.+++.|....++.++..
T Consensus 192 lnl~tkl~e~hsgelwrgrwqgn--divakil~vr~~-t~risrdfneefp~lrifs-hpnilpvlgacnsppnlv~isq 267 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQGN--DIVAKILNVREV-TARISRDFNEEFPALRIFS-HPNILPVLGACNSPPNLVIISQ 267 (448)
T ss_pred hhhhhhhccCCCcccccccccCc--chhhhhhhhhhc-chhhcchhhhhCcceeeec-CCchhhhhhhccCCCCceEeee
Confidence 45567888999999999999754 577788765443 2233456788888888777 9999999999999999999999
Q ss_pred ccCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHcC--CeeecCCCCcEEeecCCCCCCeeE--eecccccccC
Q 010013 149 LCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVHYCHSMG--VMHRDLKPENFLFSSSAEDSPLKA--TDFGLSVFFK 222 (520)
Q Consensus 149 ~~~g~~L~~~l~~~~~--l~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~kl--~Dfg~a~~~~ 222 (520)
|++-|+|+..++.... .+..++.+++..++.|++|||+.. |.---|....+++ +++.+.+| .|--++...
T Consensus 268 ~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmi---dedltarismad~kfsfqe- 343 (448)
T KOG0195|consen 268 YMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMI---DEDLTARISMADTKFSFQE- 343 (448)
T ss_pred eccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEe---cchhhhheecccceeeeec-
Confidence 9999999999987654 678899999999999999999874 5555688889999 44544554 342222221
Q ss_pred CCCcccccccCCCccCchhhccc----CCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCH
Q 010013 223 PGDVFKDLVGSAYYVAPEVLRRN----YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298 (520)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~~~----~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (520)
....-.|.||+||.++.. .-..+|+|||++++|||.|...||...++.+.-.++.-...... ..+.++.
T Consensus 344 -----~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~--ippgis~ 416 (448)
T KOG0195|consen 344 -----VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVH--IPPGISR 416 (448)
T ss_pred -----cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhcccccc--CCCCccH
Confidence 122347899999998643 23578999999999999999999998888776666544333222 2368899
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHH
Q 010013 299 SAKDIVKKMLHADPKERLSAAEVL 322 (520)
Q Consensus 299 ~~~~li~~~l~~dp~~Rps~~~~l 322 (520)
.+..|+.-|+..||.+||.+..++
T Consensus 417 hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 417 HMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred HHHHHHHHHhcCCCCcCCCcceeh
Confidence 999999999999999999887653
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=2e-22 Score=208.68 Aligned_cols=245 Identities=22% Similarity=0.298 Sum_probs=176.7
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccc-cCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRK-LINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~-~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
.|...+.||++-|=+|.+|++.. | .|+||++.+.. ...-....+...|++ ..-. .+||++.+.-+...+...|+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~e-G-~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~-~~pn~lPfqk~~~t~kAAylv 99 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDRE-G-LVVVKVFVKQDPTISLRPFKQRLEEIK-FALM-KAPNCLPFQKVLVTDKAAYLV 99 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCC-c-eEEEEEEeccCCCCCchHHHHHHHHHH-HHhh-cCCcccchHHHHHhhHHHHHH
Confidence 57788999999999999999865 4 48999986543 222233344444555 3333 499999998887778888888
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc--CCC
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF--KPG 224 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~--~~~ 224 (520)
=+|.. -+|+|++....-+..-+.+-|+-||+.||..+|..||+|||||.+|||+. .-+-+.|+||..-+.. ...
T Consensus 100 Rqyvk-hnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiT---SWNW~~LtDFAsFKPtYLPeD 175 (1431)
T KOG1240|consen 100 RQYVK-HNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILIT---SWNWLYLTDFASFKPTYLPED 175 (1431)
T ss_pred HHHHh-hhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEe---eechhhhhcccccCCccCCCC
Confidence 88884 49999998877788888899999999999999999999999999999995 4667899999765542 111
Q ss_pred C--c----ccccccCCCccCchhhcc-----------c-CCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCC
Q 010013 225 D--V----FKDLVGSAYYVAPEVLRR-----------N-YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285 (520)
Q Consensus 225 ~--~----~~~~~gt~~y~aPE~~~~-----------~-~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~ 285 (520)
. . +.+...-.+|.|||.+.. . .+++.||||+||++.||++ |++||.-. .+-....+.
T Consensus 176 NPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS----QL~aYr~~~ 251 (1431)
T KOG1240|consen 176 NPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS----QLLAYRSGN 251 (1431)
T ss_pred CcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH----HHHhHhccC
Confidence 1 1 122233457999997632 1 4578999999999999998 78888311 111111111
Q ss_pred CCCCCCCCCCC-CHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 286 IDFSSDPWPNI-SSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 286 ~~~~~~~~~~~-~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
...+...+..+ +..++.+|..|++.||++|.|+++.|+.
T Consensus 252 ~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 252 ADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred ccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 00000000111 2468999999999999999999999975
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=8.6e-21 Score=171.22 Aligned_cols=139 Identities=22% Similarity=0.277 Sum_probs=108.9
Q ss_pred cceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhcc----CCCCeeEEEEEEEeCC---eEE
Q 010013 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT----GHRNIVELKGAYEDRH---SVN 144 (520)
Q Consensus 72 ~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~----~hp~iv~l~~~~~~~~---~~~ 144 (520)
.+.||+|+||.||. +..++.. +||++.... ....+.+.+|+.+++.+. .||||++++++++++. .++
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~---~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~ 80 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRG---DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVY 80 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEeccc---cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEE
Confidence 47899999999995 7666555 689886532 223467899999999994 3899999999998863 434
Q ss_pred -EEEec--cCCCchHHHHHhcCCCCHHHHHHHHHHHHHHH-HHHHHcCCeeecCCCCcEEeecCC-CCCCeeEeeccccc
Q 010013 145 -LIMDL--CAGGELFDRIIAKGHYSERAAANLCRQMVTVV-HYCHSMGVMHRDLKPENFLFSSSA-EDSPLKATDFGLSV 219 (520)
Q Consensus 145 -lv~e~--~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l-~~LH~~~ivH~Dlkp~NIll~~~~-~~~~~kl~Dfg~a~ 219 (520)
+|+|| +.+++|.+++.+. .+++. ..++.|++.++ .|||+++|+||||||+|||++..+ .+..++|+||+.+.
T Consensus 81 ~~I~e~~G~~~~tL~~~l~~~-~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~ 157 (210)
T PRK10345 81 DVIADFDGKPSITLTEFAEQC-RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGES 157 (210)
T ss_pred EEEecCCCCcchhHHHHHHcc-cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCc
Confidence 78999 5579999999664 46655 35678888887 899999999999999999997543 34579999954443
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.3e-21 Score=202.04 Aligned_cols=195 Identities=23% Similarity=0.350 Sum_probs=159.2
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhcc--CCCCeeEEEEEEEeCCeE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT--GHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~--~hp~iv~l~~~~~~~~~~ 143 (520)
...|.|.+.||+|+||.||+|.+.+ |+.||+|+-.+...+.=-.-. +++.+|. --+.|..+...+...+.-
T Consensus 697 ~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfYI~~------q~~~RLk~~~~~~~~~~~~a~~~~~~S 769 (974)
T KOG1166|consen 697 GEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFYICL------QVMERLKPQMLPSIMHISSAHVFQNAS 769 (974)
T ss_pred ceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeeeehH------HHHHhhchhhhcchHHHHHHHccCCcc
Confidence 3578888999999999999999987 999999997765443221112 2233332 135566666666677778
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeec----CCCCCCeeEeeccccc
Q 010013 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSS----SAEDSPLKATDFGLSV 219 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~----~~~~~~~kl~Dfg~a~ 219 (520)
++|+||.+.|+|.+++...+.+++..+..++.||+..+.+||..+||||||||+|+|+.. +.+...++|+|||.+-
T Consensus 770 ~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~si 849 (974)
T KOG1166|consen 770 VLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSI 849 (974)
T ss_pred eeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccce
Confidence 899999999999999998888999999999999999999999999999999999999963 2345679999999987
Q ss_pred cc---CCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCC
Q 010013 220 FF---KPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVP 267 (520)
Q Consensus 220 ~~---~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~ 267 (520)
.+ ..+..+...++|-.+-.+|+..| .|+...|.|.++.+++-||.|++
T Consensus 850 Dm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 850 DMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred eeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 65 34446677788999999999865 59999999999999999999854
|
|
| >PTZ00183 centrin; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.6e-20 Score=161.86 Aligned_cols=144 Identities=34% Similarity=0.590 Sum_probs=131.5
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc-chhhh
Q 010013 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM-NRVER 443 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~-~~~~~ 443 (520)
..+++++++++..+|..+|.+++|.|+.+||..++..+|..++..++..+|..+|.+++|.|+|+||+.++... .....
T Consensus 9 ~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~ 88 (158)
T PTZ00183 9 PGLTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDP 88 (158)
T ss_pred CCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCc
Confidence 45788999999999999999999999999999999999988889999999999999999999999999876532 23345
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.+.++.+|+.+|.+++|.|+.+||..++..++.. +..++..+|..+|.|++|.|+|+||+.++..
T Consensus 89 ~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~l~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 154 (158)
T PTZ00183 89 REEILKAFRLFDDDKTGKISLKNLKRVAKELGETITDEELQEMIDEADRNGDGEISEEEFYRIMKK 154 (158)
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 6789999999999999999999999999998877 8889999999999999999999999999976
|
|
| >PTZ00184 calmodulin; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.6e-20 Score=159.01 Aligned_cols=145 Identities=40% Similarity=0.698 Sum_probs=130.9
Q ss_pred HhhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc-chhh
Q 010013 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM-NRVE 442 (520)
Q Consensus 364 ~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~-~~~~ 442 (520)
+..+++++++++...|..+|.+++|.|+.+||..++..++..+..+++..+|..+|.+++|.|+|+||+.++... ....
T Consensus 2 ~~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~ 81 (149)
T PTZ00184 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDTD 81 (149)
T ss_pred CCccCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCc
Confidence 456788899999999999999999999999999999999988888999999999999999999999999877643 2234
Q ss_pred hHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 443 REEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 443 ~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..+.+..+|+.||.+++|+|+.+||..++..++.. +.++++.+|..+|.+++|.|+|+||+.++..
T Consensus 82 ~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 148 (149)
T PTZ00184 82 SEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMS 148 (149)
T ss_pred HHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCCCCCHHHHHHHHHhcCCCCCCcCcHHHHHHHHhc
Confidence 55678999999999999999999999999998876 8888999999999999999999999998863
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.6e-20 Score=170.27 Aligned_cols=148 Identities=16% Similarity=0.121 Sum_probs=115.4
Q ss_pred cceeecceeeccCCeEEEEEE-EcCCCcEEEEEEecccccCC-------------------cc--cHHHHHHHHHHHHhc
Q 010013 67 NTYIFGRELGRGQFGVTYLVT-HKDTKQQFACKSISSRKLIN-------------------RD--DVEDVRREVQIMHHL 124 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~-~~~~~~~~avK~~~~~~~~~-------------------~~--~~~~~~~e~~~l~~l 124 (520)
..|.+.+.||+|++|.||+|. +..+|+.||+|++....... .. ....+.+|+.++.++
T Consensus 28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L 107 (237)
T smart00090 28 ILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL 107 (237)
T ss_pred chHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 358899999999999999998 66789999999987532110 00 113467899999999
Q ss_pred cC-CCCeeEEEEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcC-CeeecCCCCcEEee
Q 010013 125 TG-HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG-VMHRDLKPENFLFS 202 (520)
Q Consensus 125 ~~-hp~iv~l~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIll~ 202 (520)
.. +..+++++++ ...++||||++|.+|.........+....+..++.||+.+|.+||+.| ++||||||+||+++
T Consensus 108 ~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~ 183 (237)
T smart00090 108 YEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH 183 (237)
T ss_pred HhcCCCCCeeeEe----cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE
Confidence 72 1334555543 234799999999888766545556777778899999999999999999 99999999999995
Q ss_pred cCCCCCCeeEeecccccccC
Q 010013 203 SSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 203 ~~~~~~~~kl~Dfg~a~~~~ 222 (520)
++.++|+|||.+....
T Consensus 184 ----~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 184 ----DGKVVIIDVSQSVELD 199 (237)
T ss_pred ----CCCEEEEEChhhhccC
Confidence 4569999999988643
|
|
| >KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.9e-19 Score=144.61 Aligned_cols=145 Identities=28% Similarity=0.488 Sum_probs=133.8
Q ss_pred HHhhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhc-cchh
Q 010013 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH-MNRV 441 (520)
Q Consensus 363 i~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~-~~~~ 441 (520)
+-..|++.+|+++.+.|..+|.|+||.|++++|+..+.++|...+++++..++... .|.|+|.-|+.++.. +...
T Consensus 22 vFamf~q~QIqEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~~~d~elDaM~~Ea----~gPINft~FLTmfGekL~gt 97 (171)
T KOG0031|consen 22 VFAMFDQSQIQEFKEAFNLMDQNRDGFIDKEDLRDMLASLGKIASDEELDAMMKEA----PGPINFTVFLTMFGEKLNGT 97 (171)
T ss_pred HHHHhhHHHHHHHHHHHHHHhccCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHhC----CCCeeHHHHHHHHHHHhcCC
Confidence 44578899999999999999999999999999999999999999999999999874 889999999998874 4555
Q ss_pred hhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHcCCC
Q 010013 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGNP 511 (520)
Q Consensus 442 ~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~~~~ 511 (520)
+.++.+..+|+.||.+++|+|..+.|+.+|...|.. ++++++++|+.+-.|..|.|+|.+|+.+|+++..
T Consensus 98 dpe~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~gDr~~~eEV~~m~r~~p~d~~G~~dy~~~~~~ithG~~ 168 (171)
T KOG0031|consen 98 DPEEVILNAFKTFDDEGSGKIDEDYLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFDYKAFTYIITHGEK 168 (171)
T ss_pred CHHHHHHHHHHhcCccCCCccCHHHHHHHHHHhcccCCHHHHHHHHHhCCcccCCceeHHHHHHHHHcccc
Confidence 778899999999999999999999999999999988 9999999999999999999999999999987543
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.6e-20 Score=179.69 Aligned_cols=175 Identities=31% Similarity=0.507 Sum_probs=134.8
Q ss_pred CeEEEEEeccCCCchHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccc
Q 010013 141 HSVNLIMDLCAGGELFDRIIAKG---HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (520)
Q Consensus 141 ~~~~lv~e~~~g~~L~~~l~~~~---~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~ 217 (520)
.++||.|++|.-.+|.+++.... ..+......++.|++.|+.| +|.+|+|+||.||++. .+..+||.|||+
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~---~d~q~kIgDFgl 402 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFS---DDDQLKIGDFGL 402 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccc---cchhhhhhhhhh
Confidence 46889999999999999997543 36778899999999999999 9999999999999994 455799999999
Q ss_pred ccccCCCC-------cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCH-HHHHHHHHcCCCCC
Q 010013 218 SVFFKPGD-------VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETE-QSIFDAILRGHIDF 288 (520)
Q Consensus 218 a~~~~~~~-------~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~-~~~~~~~~~~~~~~ 288 (520)
........ ..+...||+.||+||.+.+ .|+.++||||||++|+||+. +|..... ......+..+.++
T Consensus 403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~---~f~T~~er~~t~~d~r~g~ip- 478 (516)
T KOG1033|consen 403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI---QFSTQFERIATLTDIRDGIIP- 478 (516)
T ss_pred eeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH---HhccHHHHHHhhhhhhcCCCC-
Confidence 87664433 4456789999999999985 59999999999999999997 2322222 2223334444333
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 289 SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 289 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
...+.+. +.-..|+.+||++.|.+||++.+.--|.|.
T Consensus 479 -~~~~~d~-p~e~~ll~~lls~~p~~RP~~~~~~~~~~~ 515 (516)
T KOG1033|consen 479 -PEFLQDY-PEEYTLLQQLLSPSPEERPSAIEVALHEFL 515 (516)
T ss_pred -hHHhhcC-cHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence 1111222 445689999999999999988777777664
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.6e-18 Score=159.31 Aligned_cols=137 Identities=25% Similarity=0.348 Sum_probs=113.2
Q ss_pred ceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcc-----cHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 010013 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRD-----DVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~-----~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 147 (520)
+.||+|++|.||+|.+ +|..+++|+.......... ....+.+|+.++..+. |++|+....++.+....++||
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~p~~~~~~~~~~~lv~ 78 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRAR-KAGVNVPAVYFVDPENFIIVM 78 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHH-HCCCCCCeEEEEeCCCCEEEE
Confidence 5799999999999987 5677899986543322211 1245788999999998 888887777777778889999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccc
Q 010013 148 DLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (520)
Q Consensus 148 e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 220 (520)
||++|++|.+.+..... ....++.+++.+|.+||+.|++|+|++|.|||++ ++.++|+|||.+..
T Consensus 79 e~~~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~----~~~~~liDf~~a~~ 143 (211)
T PRK14879 79 EYIEGEPLKDLINSNGM----EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS----GGKIYLIDFGLAEF 143 (211)
T ss_pred EEeCCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE----CCCEEEEECCcccC
Confidence 99999999998865432 7889999999999999999999999999999995 45699999998875
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.1e-18 Score=172.82 Aligned_cols=198 Identities=24% Similarity=0.354 Sum_probs=156.2
Q ss_pred HhccCCCCeeEEEEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCC-eeecCCCCcE
Q 010013 122 HHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGV-MHRDLKPENF 199 (520)
Q Consensus 122 ~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~i-vH~Dlkp~NI 199 (520)
+.+. |.|+.+++|.+.++...++|.+||..|+|.+.+.. .-.+++.....+++.|+.||.|||+.-| .|+.|+..|.
T Consensus 2 ~~l~-h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC 80 (484)
T KOG1023|consen 2 RQLD-HDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC 80 (484)
T ss_pred cccc-hhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence 4566 99999999999999999999999999999999977 4468889999999999999999998765 9999999999
Q ss_pred EeecCCCCCCeeEeecccccccCCC---CcccccccCCCccCchhhccc--------CCCcchhHHHHHHHHHHhhCCCC
Q 010013 200 LFSSSAEDSPLKATDFGLSVFFKPG---DVFKDLVGSAYYVAPEVLRRN--------YGAEADIWSAGVILYILLSGVPP 268 (520)
Q Consensus 200 ll~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~--------~~~~~Dv~slG~~l~~ll~g~~p 268 (520)
++ +....+||+|||+....... .......-...|.|||.++.. .+.+.||||+|++++|+++...|
T Consensus 81 lv---d~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~ 157 (484)
T KOG1023|consen 81 LV---DSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGP 157 (484)
T ss_pred ee---eeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCc
Confidence 99 56788999999998776421 111122234569999998642 46789999999999999999999
Q ss_pred CCCCC----HHHHHHHHHc-CCCCCCCCCC--CCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 269 FWGET----EQSIFDAILR-GHIDFSSDPW--PNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 269 f~~~~----~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
|.... ..++...+.. +...+.+..+ ..+++.+..++..||..+|++||+++++-.
T Consensus 158 ~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~ 219 (484)
T KOG1023|consen 158 FDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRS 219 (484)
T ss_pred cccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHh
Confidence 96632 2345555555 2222222211 145668999999999999999999999864
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.4e-20 Score=193.57 Aligned_cols=258 Identities=30% Similarity=0.508 Sum_probs=206.4
Q ss_pred ceeecceeeccCCeEEEEEEEcCC-CcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDT-KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
.|.+.+.||+|+|+.|-......+ ...+|.|.+.... ......+....|..+-..+.+|+|++.+++........+++
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~ 99 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS 99 (601)
T ss_pred cccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence 366677799999999998877543 3445666554332 23334556667888888887799999999999999999999
Q ss_pred EeccCCCchHHHH-HhcC-CCCHHHHHHHHHHHHHHHHHHH-HcCCeeecCCCCcEEeecCCCCC-CeeEeecccccccC
Q 010013 147 MDLCAGGELFDRI-IAKG-HYSERAAANLCRQMVTVVHYCH-SMGVMHRDLKPENFLFSSSAEDS-PLKATDFGLSVFFK 222 (520)
Q Consensus 147 ~e~~~g~~L~~~l-~~~~-~l~~~~~~~i~~qi~~~l~~LH-~~~ivH~Dlkp~NIll~~~~~~~-~~kl~Dfg~a~~~~ 222 (520)
++|..|+++.+.+ .... ..+...+..++.|+..++.|+| ..++.|+|+||+|.+++. .+ .+++.|||+|..+.
T Consensus 100 ~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~---s~~~l~~~df~~At~~~ 176 (601)
T KOG0590|consen 100 LSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDE---SGSALKIADFGLATAYR 176 (601)
T ss_pred cCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhcc---CCCcccCCCchhhcccc
Confidence 9999999999988 5554 6788888999999999999999 999999999999999953 44 79999999998775
Q ss_pred C-CC---ccccccc-CCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHH-HHHHHcCCCCCCCCCCC
Q 010013 223 P-GD---VFKDLVG-SAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSI-FDAILRGHIDFSSDPWP 294 (520)
Q Consensus 223 ~-~~---~~~~~~g-t~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~ 294 (520)
. .. .....+| ++.|+|||...+ ...+..|+||.|+++..+++|..||........ +.........+...+|.
T Consensus 177 ~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (601)
T KOG0590|consen 177 NKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWN 256 (601)
T ss_pred ccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccccccCccc
Confidence 4 22 2344578 999999998865 467889999999999999999999876554331 12222222333456778
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcccc
Q 010013 295 NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 295 ~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
.++....+++.+++..+|..|.+.+++-.++|+..
T Consensus 257 ~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 257 SISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred cCChhhhhcccccccCCchhccccccccccccccc
Confidence 89999999999999999999999999999999987
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.9e-18 Score=155.13 Aligned_cols=134 Identities=21% Similarity=0.280 Sum_probs=106.2
Q ss_pred eeeccCCeEEEEEEEcCCCcEEEEEEecccccCCc-----ccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 010013 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR-----DDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMD 148 (520)
Q Consensus 74 ~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~-----~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e 148 (520)
.||+|+||.||+|.+ ++..+++|.......... ....++.+|+.++..+. |+++.....++......++|||
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~p~~~~~~~~~~~lv~e 77 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRAR-KAGVNTPVVYDVDPDNKTIVME 77 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHH-HCCCCCCEEEEEECCCCEEEEE
Confidence 489999999999985 467899998654332221 12356788999999998 7766554445556667789999
Q ss_pred ccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 149 LCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 149 ~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
|++|++|.+.+..... .++.+++.+|.+||+.|++|+|++|.||+++ ++.++++|||.+...
T Consensus 78 ~~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~----~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 78 YIEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR----DDKLYLIDFGLGKYS 139 (199)
T ss_pred EECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE----CCcEEEEECCCCcCC
Confidence 9999999987754321 7899999999999999999999999999995 567999999988763
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.7e-18 Score=153.21 Aligned_cols=140 Identities=16% Similarity=0.197 Sum_probs=107.9
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCc-------------------ccHHHHHHHHHHHHhccCCC
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR-------------------DDVEDVRREVQIMHHLTGHR 128 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~-------------------~~~~~~~~e~~~l~~l~~hp 128 (520)
.|.+.+.||+|+||.||++.+. +|+.+|||++........ ........|..++..+. |+
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~ 93 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALY-EE 93 (198)
T ss_pred hhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHH-Hc
Confidence 3888899999999999999885 689999998754320000 01123678899999987 66
Q ss_pred --CeeEEEEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCC
Q 010013 129 --NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAE 206 (520)
Q Consensus 129 --~iv~l~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~ 206 (520)
.++..++. ...++||||++|++|..... ......++.+++.++.++|+.|++||||||+||+++ .
T Consensus 94 ~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~---~ 160 (198)
T cd05144 94 GFPVPKPIDW----NRHAVVMEYIDGVELYRVRV------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVD---D 160 (198)
T ss_pred CCCCCceeec----CCceEEEEEeCCcchhhccc------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEc---C
Confidence 45555542 44589999999998866432 134567899999999999999999999999999994 4
Q ss_pred CCCeeEeecccccccC
Q 010013 207 DSPLKATDFGLSVFFK 222 (520)
Q Consensus 207 ~~~~kl~Dfg~a~~~~ 222 (520)
++.++|+|||.+....
T Consensus 161 ~~~~~liDfg~~~~~~ 176 (198)
T cd05144 161 DEKIYIIDWPQMVSTD 176 (198)
T ss_pred CCcEEEEECCccccCC
Confidence 6789999999987654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.2e-17 Score=174.29 Aligned_cols=142 Identities=21% Similarity=0.271 Sum_probs=112.9
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCC-----cccHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN-----RDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-----~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~ 139 (520)
....|...+.||+|+||.||+|.+... .+++|+........ ....+.+.+|+.+++.+. |++++....++.+
T Consensus 331 ~~~~~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~p~~~~~~ 407 (535)
T PRK09605 331 VKRRKIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEAR-RAGVPTPVIYDVD 407 (535)
T ss_pred cccccCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhc-ccCCCeeEEEEEe
Confidence 345567789999999999999987543 34444432221111 122356889999999998 9999888777777
Q ss_pred CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccc
Q 010013 140 RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (520)
Q Consensus 140 ~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~ 219 (520)
....++||||++|++|.+.+. ....++.+++.+|.+||+.|++||||||+|||+. ++.++|+|||+++
T Consensus 408 ~~~~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~----~~~~~liDFGla~ 475 (535)
T PRK09605 408 PEEKTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVR----DDRLYLIDFGLGK 475 (535)
T ss_pred CCCCEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEEE----CCcEEEEeCcccc
Confidence 777899999999999998775 3567899999999999999999999999999993 4569999999987
Q ss_pred cc
Q 010013 220 FF 221 (520)
Q Consensus 220 ~~ 221 (520)
..
T Consensus 476 ~~ 477 (535)
T PRK09605 476 YS 477 (535)
T ss_pred cC
Confidence 63
|
|
| >KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.75 E-value=6.9e-18 Score=146.66 Aligned_cols=148 Identities=31% Similarity=0.518 Sum_probs=121.6
Q ss_pred hhhhHHHHhhHHHHhcccCCC-CCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCc-eehhhhHHHhhccchhh
Q 010013 365 ENLSEEEIMGLKEMFKSMDTD-NSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGT-IDYIEFITATMHMNRVE 442 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D~~-~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~-i~~~ef~~~~~~~~~~~ 442 (520)
..++..++..|...|.++|.+ ++|+|+.+||..+. .+..++ ...+++..++.+++|. |+|++|+..+.......
T Consensus 25 ~~fs~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~-~~~~Np---~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~ 100 (187)
T KOG0034|consen 25 TQFSANEIERLYERFKKLDRNNGDGYLTKEEFLSIP-ELALNP---LADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKA 100 (187)
T ss_pred cccCHHHHHHHHHHHHHhccccccCccCHHHHHHHH-HHhcCc---HHHHHHHHHhccCCCCccCHHHHHHHHhhhcCCc
Confidence 458899999999999999999 99999999999987 333333 3468888888888888 99999999887655444
Q ss_pred h-HHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCC-C-C--H----HHHHHHHHHhcCCCCcceeHHHHHHHHHcCCCCC
Q 010013 443 R-EEHLYKAFEYFDKDNSGYITMEELEHALKKYNM-G-D--A----KTIKEIIAEVDIDNDGRINYEEFAAMMRKGNPDM 513 (520)
Q Consensus 443 ~-~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~-~-~--~----~~~~~~~~~~d~~~dg~i~~~ef~~~l~~~~~~~ 513 (520)
. .++++-+|+.||.+++|+|+.+||..++..+-. . + + +.++.+|.++|.|+||+|+|+||.+++.+ .|+.
T Consensus 101 ~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~~-~P~~ 179 (187)
T KOG0034|consen 101 SKREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVEK-QPDL 179 (187)
T ss_pred cHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHc-CccH
Confidence 4 459999999999999999999999999987533 2 3 2 23677899999999999999999999987 5554
Q ss_pred CCCc
Q 010013 514 VGNR 517 (520)
Q Consensus 514 ~~~~ 517 (520)
..++
T Consensus 180 ~~~m 183 (187)
T KOG0034|consen 180 LEKM 183 (187)
T ss_pred HHHc
Confidence 4433
|
|
| >KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.5e-17 Score=130.22 Aligned_cols=140 Identities=24% Similarity=0.413 Sum_probs=123.6
Q ss_pred hhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCC--CCCceehhhhHHHhhccch---h
Q 010013 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVD--GNGTIDYIEFITATMHMNR---V 441 (520)
Q Consensus 367 ~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~--~~g~i~~~ef~~~~~~~~~---~ 441 (520)
+++++..++.++|..||..+||+|+..+....|+.+|.++++.++.+.....+.+ +--.|+|++|+.++....+ .
T Consensus 5 ~~~d~~~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vaknk~q 84 (152)
T KOG0030|consen 5 FTPDQMEEFKEAFLLFDRTGDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKNKDQ 84 (152)
T ss_pred cCcchHHHHHHHHHHHhccCcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhcccc
Confidence 4566778999999999999999999999999999999999999999999998877 4478999999998775433 3
Q ss_pred hhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHH
Q 010013 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507 (520)
Q Consensus 442 ~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~ 507 (520)
.+-+..-.-++.||++++|.|...||+.+|.++|.. +++++++++.-.. |++|.|+|+.|++.+-
T Consensus 85 ~t~edfvegLrvFDkeg~G~i~~aeLRhvLttlGekl~eeEVe~Llag~e-D~nG~i~YE~fVk~i~ 150 (152)
T KOG0030|consen 85 GTYEDFVEGLRVFDKEGNGTIMGAELRHVLTTLGEKLTEEEVEELLAGQE-DSNGCINYEAFVKHIM 150 (152)
T ss_pred CcHHHHHHHHHhhcccCCcceeHHHHHHHHHHHHhhccHHHHHHHHcccc-ccCCcCcHHHHHHHHh
Confidence 455677788999999999999999999999999999 9999999988764 7899999999998664
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.3e-17 Score=146.71 Aligned_cols=142 Identities=16% Similarity=0.199 Sum_probs=100.7
Q ss_pred ecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHH---------------------HHHHHHHHHHhccCC-C
Q 010013 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVE---------------------DVRREVQIMHHLTGH-R 128 (520)
Q Consensus 71 ~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~---------------------~~~~e~~~l~~l~~h-p 128 (520)
+.+.||+|+||.||+|.+. +++.||||++............ ....|...+.++..+ -
T Consensus 1 ~~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~ 79 (187)
T cd05119 1 VGGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGV 79 (187)
T ss_pred CCcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCC
Confidence 3578999999999999987 7899999998653221111111 124677777777622 2
Q ss_pred CeeEEEEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeecCCCCcEEeecCCCC
Q 010013 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAED 207 (520)
Q Consensus 129 ~iv~l~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~ivH~Dlkp~NIll~~~~~~ 207 (520)
.+.+++++ ...++||||++|+.+........... ..+..++.+++.++.++|. .||+|+||||+||+++ +
T Consensus 80 ~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~----~ 150 (187)
T cd05119 80 PVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVRLL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD----D 150 (187)
T ss_pred CCCceEec----CCCEEEEEEeCCCCccChhhhhhhhc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE----C
Confidence 34555543 23589999999954322111111111 6778899999999999999 9999999999999995 5
Q ss_pred CCeeEeecccccccC
Q 010013 208 SPLKATDFGLSVFFK 222 (520)
Q Consensus 208 ~~~kl~Dfg~a~~~~ 222 (520)
+.++|+|||.+....
T Consensus 151 ~~~~liDfg~a~~~~ 165 (187)
T cd05119 151 GKVYIIDVPQAVEID 165 (187)
T ss_pred CcEEEEECccccccc
Confidence 679999999997654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.72 E-value=8.1e-17 Score=139.83 Aligned_cols=144 Identities=28% Similarity=0.409 Sum_probs=121.8
Q ss_pred HhhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCC-CCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhh
Q 010013 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTR-LSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVE 442 (520)
Q Consensus 364 ~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~-~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~ 442 (520)
...++..++..+.+-|.. .-.+|.|+.++|+.++..+... -.....+.+|..+|.|++|.|+|.||+..+.......
T Consensus 20 ~t~f~~~ei~~~Yr~Fk~--~cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rGt 97 (193)
T KOG0044|consen 20 QTKFSKKEIQQWYRGFKN--ECPSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEFICALSLTSRGT 97 (193)
T ss_pred hcCCCHHHHHHHHHHhcc--cCCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCCc
Confidence 356777887777777776 4579999999999999998753 3445579999999999999999999999998887888
Q ss_pred hHHHHHHHHhhhcCCCCCceeHHHHHHHHHh----cCC----C----CHHHHHHHHHHhcCCCCcceeHHHHHHHHHcC
Q 010013 443 REEHLYKAFEYFDKDNSGYITMEELEHALKK----YNM----G----DAKTIKEIIAEVDIDNDGRINYEEFAAMMRKG 509 (520)
Q Consensus 443 ~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~----~~~----~----~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~~ 509 (520)
.++.++.+|+.||.|++|+||++|+..+++. .+. . .++.+..+|+.+|.|+||.||++||+..++.+
T Consensus 98 ~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~d 176 (193)
T KOG0044|consen 98 LEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCKAD 176 (193)
T ss_pred HHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhhhC
Confidence 8899999999999999999999998877754 332 1 24558899999999999999999999988763
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.4e-17 Score=161.47 Aligned_cols=257 Identities=23% Similarity=0.294 Sum_probs=198.0
Q ss_pred ccccceeecceeec--cCCeEEEEEEE--cCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 010013 64 DVRNTYIFGRELGR--GQFGVTYLVTH--KDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (520)
Q Consensus 64 ~~~~~y~~~~~lg~--G~~g~Vy~~~~--~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~ 139 (520)
.+...+.+...+|. |.+|.||.+.. ..++..+|+|.-+. ....+.....=.+|+...+++..|++.++.+..++.
T Consensus 111 ~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~-p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~ 189 (524)
T KOG0601|consen 111 FFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKI-PFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEG 189 (524)
T ss_pred hhhhhcccccccccCCCCCceeecccCCcccCCcccccccccC-CCCCccccccccchhhcccccCccccccccCccccc
Confidence 34556777889999 99999999988 78889999987321 111112222234566667777789999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHhcCC-CCHHHHHHHHHHHHH----HHHHHHHcCCeeecCCCCcEEeecCCCC-CCeeEe
Q 010013 140 RHSVNLIMDLCAGGELFDRIIAKGH-YSERAAANLCRQMVT----VVHYCHSMGVMHRDLKPENFLFSSSAED-SPLKAT 213 (520)
Q Consensus 140 ~~~~~lv~e~~~g~~L~~~l~~~~~-l~~~~~~~i~~qi~~----~l~~LH~~~ivH~Dlkp~NIll~~~~~~-~~~kl~ 213 (520)
.+..++-+|+| |.+|.++...... ++...++..+.+... ||.++|+.+++|-|+||.||+.. .+ ...+++
T Consensus 190 ~~~lfiqtE~~-~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~---~~~~s~~~~ 265 (524)
T KOG0601|consen 190 SGILFIQTELC-GESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTT---SDWTSCKLT 265 (524)
T ss_pred CCcceeeeccc-cchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecc---cccceeecC
Confidence 99999999999 5788887776555 889999999999999 99999999999999999999995 34 779999
Q ss_pred ecccccccCCCCcc------cccccCCCccCchhhcccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCC
Q 010013 214 DFGLSVFFKPGDVF------KDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID 287 (520)
Q Consensus 214 Dfg~a~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~ 287 (520)
|||+...+..+... ....|...|++||..++-++...|+|++|.++.+-.+|..++....... +..+..+.
T Consensus 266 df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~-W~~~r~~~-- 342 (524)
T KOG0601|consen 266 DFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSS-WSQLRQGY-- 342 (524)
T ss_pred CcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCC-cccccccc--
Confidence 99999887655411 1225777899999999999999999999999999888876654331100 11111111
Q ss_pred CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccc
Q 010013 288 FSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (520)
Q Consensus 288 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~ 328 (520)
.+.......+..+...+..|+..+|-.|++++.+++|+++.
T Consensus 343 ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~ 383 (524)
T KOG0601|consen 343 IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIH 383 (524)
T ss_pred CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcccccc
Confidence 22223345567778899999999999999999999999987
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.68 E-value=7.9e-16 Score=142.88 Aligned_cols=138 Identities=18% Similarity=0.255 Sum_probs=103.3
Q ss_pred ceee-ccCCeEEEEEEEcCCCcEEEEEEeccccc----------CCcccHHHHHHHHHHHHhccCCCCe--eEEEEEEEe
Q 010013 73 RELG-RGQFGVTYLVTHKDTKQQFACKSISSRKL----------INRDDVEDVRREVQIMHHLTGHRNI--VELKGAYED 139 (520)
Q Consensus 73 ~~lg-~G~~g~Vy~~~~~~~~~~~avK~~~~~~~----------~~~~~~~~~~~e~~~l~~l~~hp~i--v~l~~~~~~ 139 (520)
..|| .||.|+||.+... +..+|||.+..... .......++.+|+.++.+|. |++| +.++++...
T Consensus 37 ~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~-~~gi~vP~pl~~~~~ 113 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLY-EAGLPVPRPIAARVV 113 (239)
T ss_pred ceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHH-hCCCCCceeEeeeee
Confidence 5677 8888999998774 67899998753221 11123456889999999998 7774 677776433
Q ss_pred C-Ce---EEEEEeccCC-CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEee
Q 010013 140 R-HS---VNLIMDLCAG-GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATD 214 (520)
Q Consensus 140 ~-~~---~~lv~e~~~g-~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~D 214 (520)
. .. .++|||+++| .+|.+.+.. ..+++.. +.+|+.+|.+||+.||+||||||.|||++ .++.++|+|
T Consensus 114 ~~~~~~~~~lV~e~l~G~~~L~~~l~~-~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~---~~~~v~LID 185 (239)
T PRK01723 114 RHGLFYRADILIERIEGARDLVALLQE-APLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLD---PDGKFWLID 185 (239)
T ss_pred ecCcceeeeEEEEecCCCCCHHHHHhc-CCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEc---CCCCEEEEE
Confidence 2 22 3599999997 688877654 4555543 57899999999999999999999999995 345799999
Q ss_pred ccccccc
Q 010013 215 FGLSVFF 221 (520)
Q Consensus 215 fg~a~~~ 221 (520)
||.+...
T Consensus 186 fg~~~~~ 192 (239)
T PRK01723 186 FDRGELR 192 (239)
T ss_pred CCCcccC
Confidence 9988763
|
|
| >KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.9e-15 Score=130.12 Aligned_cols=129 Identities=27% Similarity=0.407 Sum_probs=117.4
Q ss_pred hHHHHhcccCCCCCCcccHHHHhhhhhhcC-CCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHh
Q 010013 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLG-TRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452 (520)
Q Consensus 374 ~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~-~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~ 452 (520)
.+...|...|+|+.|.|+.+|+.++|...+ ...+.+-++.|+..+|.+.+|+|+|+||..++..+ ..++.+|+
T Consensus 58 ~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~i------~~Wr~vF~ 131 (221)
T KOG0037|consen 58 QLAGWFQSVDRDRSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKYI------NQWRNVFR 131 (221)
T ss_pred HHHHHHHhhCccccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHH------HHHHHHHH
Confidence 578899999999999999999999998654 45677889999999999999999999999988654 46899999
Q ss_pred hhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 453 YFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 453 ~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.||+|++|.|+..||+.+|..+|.. +++-.+.+++.+|.-++|.|.|++|++++..
T Consensus 132 ~~D~D~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~ 188 (221)
T KOG0037|consen 132 TYDRDRSGTIDSSELRQALTQLGYRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVV 188 (221)
T ss_pred hcccCCCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhccccCCceeHHHHHHHHHH
Confidence 9999999999999999999999999 8888999999999888999999999998754
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.8e-15 Score=130.92 Aligned_cols=133 Identities=24% Similarity=0.311 Sum_probs=110.9
Q ss_pred ecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCC-CCeeEEEEEEEeCCeEEEEEec
Q 010013 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH-RNIVELKGAYEDRHSVNLIMDL 149 (520)
Q Consensus 71 ~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~h-p~iv~l~~~~~~~~~~~lv~e~ 149 (520)
+.+.||+|.++.||++.... ..+++|....... ...+.+|+.+++.+..+ .++++++.++...+..+++|||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEe
Confidence 45789999999999999854 6799998754321 45788999999999844 6899999988888889999999
Q ss_pred cCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHc---CCeeecCCCCcEEeecCCCCCCeeEeecccccc
Q 010013 150 CAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM---GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (520)
Q Consensus 150 ~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 220 (520)
+.|+.+... +......++.+++.+|.+||.. +++|+|++|.||+++. .+.++++|||.+..
T Consensus 75 ~~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~---~~~~~l~Df~~~~~ 138 (155)
T cd05120 75 IEGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDD---GKILGIIDWEYAGY 138 (155)
T ss_pred cCCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEEC---CcEEEEEecccccC
Confidence 998877543 5566778899999999999984 7999999999999963 56799999998875
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.8e-16 Score=162.57 Aligned_cols=259 Identities=28% Similarity=0.430 Sum_probs=203.7
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
+.+.+.+-+-+|+++.++.+.-..+|...++|+............+..+.+-.++-... +|.++...-.+......+++
T Consensus 804 d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~-~P~v~~~~~s~~~rsP~~L~ 882 (1205)
T KOG0606|consen 804 DGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPR-SPAVVRSFPSFPCRSPLPLV 882 (1205)
T ss_pred ccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCC-CCceecccCCCCCCCCcchh
Confidence 44666677888899999888877777667777665444434444444444444443333 56666554445567788999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC---
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP--- 223 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~--- 223 (520)
++|..|++|...|+..+..+.+.+...+..+.+++.+||...+.|+|++|.|++. ..+++.++.|||.......
T Consensus 883 ~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~---~~~gh~~l~~~~t~~~vg~~~p 959 (1205)
T KOG0606|consen 883 GHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLI---AYDGHRPLTDFGTLSKVGLIPP 959 (1205)
T ss_pred hHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhh---cccCCcccCccccccccccccC
Confidence 9999999999999998888888888899999999999999999999999999999 4677899999984332110
Q ss_pred ------------------C-----------CcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCC
Q 010013 224 ------------------G-----------DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGET 273 (520)
Q Consensus 224 ------------------~-----------~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~ 273 (520)
. .......||+.|.+||.+.+ .....+|.|++|+.+++.++|.+||....
T Consensus 960 ~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~t 1039 (1205)
T KOG0606|consen 960 TTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAET 1039 (1205)
T ss_pred cCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcc
Confidence 0 01123468999999998754 47788999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHH---HHHcCCccccC
Q 010013 274 EQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAA---EVLNHPWMRVD 330 (520)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~---~~l~~~~~~~~ 330 (520)
.+..++.+..+..+++..+ ...+...++++..+|..+|.+|..+. ++-.|+||+..
T Consensus 1040 pq~~f~ni~~~~~~~p~g~-~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~ 1098 (1205)
T KOG0606|consen 1040 PQQIFENILNRDIPWPEGP-EEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDV 1098 (1205)
T ss_pred hhhhhhccccCCCCCCCCc-cccChhhhhhhhhhhccCchhccCcccccccccCCccCCC
Confidence 9999999999888777654 46789999999999999999999887 88899999854
|
|
| >KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.1e-14 Score=136.17 Aligned_cols=137 Identities=26% Similarity=0.450 Sum_probs=123.9
Q ss_pred hhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCC-CCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHH
Q 010013 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTR-LSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREE 445 (520)
Q Consensus 367 ~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~-~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~ 445 (520)
..++...++..+|+.+|.+++|.++..++.+.+..+... +..+-...+|+.+|.|.||.++|+||...+. ..+.
T Consensus 8 ~~~er~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~-----~~E~ 82 (463)
T KOG0036|consen 8 TDEERDIRIRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLD-----NKEL 82 (463)
T ss_pred CcHHHHHHHHHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHH-----HhHH
Confidence 345556689999999999999999999999999998766 6667789999999999999999999998774 4466
Q ss_pred HHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 446 HLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 446 ~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
++..+|..+|.++||.|+.+|+.+.|+++|.. +++++..+|+.+|+++++.|+++||...+.-
T Consensus 83 ~l~~~F~~iD~~hdG~i~~~Ei~~~l~~~gi~l~de~~~k~~e~~d~~g~~~I~~~e~rd~~ll 146 (463)
T KOG0036|consen 83 ELYRIFQSIDLEHDGKIDPNEIWRYLKDLGIQLSDEKAAKFFEHMDKDGKATIDLEEWRDHLLL 146 (463)
T ss_pred HHHHHHhhhccccCCccCHHHHHHHHHHhCCccCHHHHHHHHHHhccCCCeeeccHHHHhhhhc
Confidence 78999999999999999999999999999999 8899999999999999999999999998764
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.52 E-value=3e-13 Score=119.82 Aligned_cols=143 Identities=14% Similarity=0.163 Sum_probs=104.3
Q ss_pred cceeeccCCeEEEEEEEcC------CCcEEEEEEecccc--c------C--C---------cccHHHH----HHHHHHHH
Q 010013 72 GRELGRGQFGVTYLVTHKD------TKQQFACKSISSRK--L------I--N---------RDDVEDV----RREVQIMH 122 (520)
Q Consensus 72 ~~~lg~G~~g~Vy~~~~~~------~~~~~avK~~~~~~--~------~--~---------~~~~~~~----~~e~~~l~ 122 (520)
...||.|--+.||.|.... .+..+|||++.... + . + ....+.+ ++|++.|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 4679999999999998653 35789999875211 0 0 0 1112233 38999999
Q ss_pred hccCC-CCeeEEEEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-HHcCCeeecCCCCcEE
Q 010013 123 HLTGH-RNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYC-HSMGVMHRDLKPENFL 200 (520)
Q Consensus 123 ~l~~h-p~iv~l~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~L-H~~~ivH~Dlkp~NIl 200 (520)
++... -++++++++ ...++||||+.+..+.....+...++......+..+++.+|..| |+.||||+||++.|||
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL 157 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNML 157 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 99732 466777765 45679999997754433222333466667788899999999998 8999999999999999
Q ss_pred eecCCCCCCeeEeecccccccC
Q 010013 201 FSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 201 l~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
+. ++.+.|+|||.+....
T Consensus 158 ~~----~~~v~iIDF~qav~~~ 175 (197)
T cd05146 158 WH----DGKVWFIDVSQSVEPT 175 (197)
T ss_pred EE----CCcEEEEECCCceeCC
Confidence 95 3569999999887654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.5e-14 Score=128.25 Aligned_cols=150 Identities=25% Similarity=0.336 Sum_probs=121.2
Q ss_pred HHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccc-------hhh
Q 010013 370 EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN-------RVE 442 (520)
Q Consensus 370 ~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~-------~~~ 442 (520)
+...++..++..+|.+++|+|+..|+..++.......-..+..+-+..+|.|.||.|+|+|++..+.... ...
T Consensus 74 e~~~rl~~l~~~iD~~~Dgfv~~~El~~wi~~s~k~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~~~~~~~~d~e 153 (325)
T KOG4223|consen 74 ESQERLGKLVPKIDSDSDGFVTESELKAWIMQSQKKYVVEEAARRWDEYDKNKDGFITWEEYLPQTYGRVDLPDEFPDEE 153 (325)
T ss_pred hhHHHHHHHHhhhcCCCCCceeHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccceeeHHHhhhhhhhcccCccccccch
Confidence 3456789999999999999999999999988766555667788889999999999999999998766321 111
Q ss_pred h-------HHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC--CHHHHHHHHHHhcCCCCcceeHHHHHHHHHcC----
Q 010013 443 R-------EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG--DAKTIKEIIAEVDIDNDGRINYEEFAAMMRKG---- 509 (520)
Q Consensus 443 ~-------~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~--~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~~---- 509 (520)
. ...-+..|++-|.|+||.+|.+||..+|..-... ..--+.+.+...|+|+||+|+++||+.-|-+.
T Consensus 154 ~~~~~~km~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~~~~ 233 (325)
T KOG4223|consen 154 DNEEYKKMIARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHEGNE 233 (325)
T ss_pred hcHHHHHHHHHHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhccCCC
Confidence 1 1124468999999999999999999999765443 33457888999999999999999999988763
Q ss_pred -CCCCCCCccC
Q 010013 510 -NPDMVGNRRR 519 (520)
Q Consensus 510 -~~~~~~~~~~ 519 (520)
.|+|+..++.
T Consensus 234 ~epeWv~~Ere 244 (325)
T KOG4223|consen 234 EEPEWVLTERE 244 (325)
T ss_pred CCcccccccHH
Confidence 5899988763
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.3e-13 Score=137.41 Aligned_cols=143 Identities=18% Similarity=0.207 Sum_probs=97.1
Q ss_pred ceeeccCCeEEEEEEEcCCCcEEEEEEecccccC--------------------------Cc-ccH----------HHHH
Q 010013 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI--------------------------NR-DDV----------EDVR 115 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~--------------------------~~-~~~----------~~~~ 115 (520)
+.||+|++|.||+|+.+ +|+.||||+..+.... +. ... -.+.
T Consensus 123 ~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 123 KPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred cceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 67999999999999986 5899999998653100 00 000 0244
Q ss_pred HHHHHHHhcc----CCCCeeEEEEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHH-HHHHHHHcCC
Q 010013 116 REVQIMHHLT----GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVT-VVHYCHSMGV 189 (520)
Q Consensus 116 ~e~~~l~~l~----~hp~iv~l~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~-~l~~LH~~~i 189 (520)
+|++.+.++. +++++.-..-+.......++||||++|++|.+..... .... ...++..++. .+..+|..|+
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~~~g~ 278 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVLRDGF 278 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhCCc
Confidence 5666666664 2444332222222344578999999999998866432 1222 3445666665 4678999999
Q ss_pred eeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 190 vH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
+|+|+||.||++ ..++.++|+|||++..+.
T Consensus 279 ~H~D~hPgNilv---~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 279 FHADLHPGNIFV---LKDGKIIALDFGIVGRLS 308 (437)
T ss_pred eeCCCCcccEEE---CCCCcEEEEeCCCeeECC
Confidence 999999999999 456789999999987653
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.49 E-value=8.6e-14 Score=141.93 Aligned_cols=157 Identities=21% Similarity=0.297 Sum_probs=100.6
Q ss_pred cCCcccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccC--------------------------Cc---
Q 010013 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI--------------------------NR--- 108 (520)
Q Consensus 58 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~--------------------------~~--- 108 (520)
++.+.+.+-..|.. +.||+|++|.||+|+++++|+.||||+..+.... +.
T Consensus 111 lG~~~~~~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~ 189 (537)
T PRK04750 111 LGGPVEEWFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREV 189 (537)
T ss_pred hCCCHHHHHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHH
Confidence 34444555556776 7899999999999999988999999999754200 00
Q ss_pred --ccHH------HHHHHHHHHHhccC---CCCeeEEEEEEE-eCCeEEEEEeccCCCchHHH--HHhcC----CCCHHHH
Q 010013 109 --DDVE------DVRREVQIMHHLTG---HRNIVELKGAYE-DRHSVNLIMDLCAGGELFDR--IIAKG----HYSERAA 170 (520)
Q Consensus 109 --~~~~------~~~~e~~~l~~l~~---hp~iv~l~~~~~-~~~~~~lv~e~~~g~~L~~~--l~~~~----~l~~~~~ 170 (520)
+..+ .+.+|+..+.++.. +...+.+-.+|. .....++||||+.|+.+.+. +...+ .+.+..+
T Consensus 190 v~e~~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v 269 (537)
T PRK04750 190 VAEFEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGV 269 (537)
T ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHH
Confidence 0011 13455555555541 233333333332 24567899999999999764 33322 1333333
Q ss_pred HHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCC-CCCCeeEeecccccccC
Q 010013 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA-EDSPLKATDFGLSVFFK 222 (520)
Q Consensus 171 ~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~-~~~~~kl~Dfg~a~~~~ 222 (520)
..++.| ++..|++|+|+||.||+++.++ ..+.++++|||++..+.
T Consensus 270 ~~~~~Q-------if~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 270 EVFFTQ-------VFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred HHHHHH-------HHhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 334444 3468999999999999996432 22479999999988753
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.7e-12 Score=110.64 Aligned_cols=135 Identities=21% Similarity=0.273 Sum_probs=102.1
Q ss_pred ceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCccc-----HHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 010013 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDD-----VEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~-----~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 147 (520)
..+++|+-+.+|.+.+. |..+++|.=.++.+..+.. .++..+|++++.++. --.|.-.+=+..+.....|+|
T Consensus 2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~-~~GV~~P~v~dvD~~~~~I~m 78 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAR-EAGVPVPIVYDVDPDNGLIVM 78 (204)
T ss_pred chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHH-HcCCCCCeEEEEcCCCCEEEE
Confidence 46789999999999774 3456777544444333332 355678999999997 445555444555777788999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 148 DLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 148 e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
||++|..|.+.+... ...++..+-.-+.-||..||+|+||.++||++. +..+.++|||++...
T Consensus 79 e~I~G~~lkd~l~~~-------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~----~~~i~~IDfGLg~~s 141 (204)
T COG3642 79 EYIEGELLKDALEEA-------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILS----GGRIYFIDFGLGEFS 141 (204)
T ss_pred EEeCChhHHHHHHhc-------chHHHHHHHHHHHHHHhcCeecCCCccceEEEe----CCcEEEEECCccccc
Confidence 999999888888665 255677777778899999999999999999995 334999999998853
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.9e-12 Score=109.60 Aligned_cols=148 Identities=17% Similarity=0.183 Sum_probs=111.4
Q ss_pred ecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCc-----ccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR-----DDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 71 ~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~-----~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
....|-+|+-+.|+++.+. |+.++||.=....+..+ -...+..+|+++|.++. --.|.-..-++.+...-.|
T Consensus 11 ~l~likQGAEArv~~~~~~--Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~-~~GI~~P~l~~~D~~~~~i 87 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS--GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCR-ALGIPAPRLIFIDTYGGQI 87 (229)
T ss_pred cceeeeccceeeEeeeccC--CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHH-HhCCCCceEEEEecCCCeE
Confidence 4567889999999999884 57777775433333222 23467789999999997 4455544445667777789
Q ss_pred EEeccCC-CchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 146 IMDLCAG-GELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 146 v~e~~~g-~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
+|||++| .++.+++.... .........++++|-..+.-||..+|+|+||..+||++...+....+.++|||++...
T Consensus 88 ~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 88 YMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred EEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhcc
Confidence 9999987 46777765532 2333334788999999999999999999999999999988777777899999998753
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.42 E-value=8.8e-13 Score=116.56 Aligned_cols=129 Identities=18% Similarity=0.176 Sum_probs=95.7
Q ss_pred cceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEeccC
Q 010013 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCA 151 (520)
Q Consensus 72 ~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~~ 151 (520)
.+.|+.|.++.||++... +..+++|+...... ....+.+|+.+++.+.....+++++.+.. ...++||||++
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~ 74 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE----LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIE 74 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc----cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecC
Confidence 367899999999999874 67899998754321 12345789999999873333455665533 33579999999
Q ss_pred CCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCC-----eeecCCCCcEEeecCCCCCCeeEeecccccc
Q 010013 152 GGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGV-----MHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (520)
Q Consensus 152 g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i-----vH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 220 (520)
|.++.+. ......++.+++.+|..||+.++ +|+|++|.||+++ ++.++++|||.+..
T Consensus 75 G~~l~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~----~~~~~liDf~~a~~ 136 (170)
T cd05151 75 GSELLTE--------DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD----DGRLWLIDWEYAGM 136 (170)
T ss_pred CCccccc--------cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE----CCeEEEEecccccC
Confidence 9887643 01123457899999999999885 9999999999995 34689999998764
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.41 E-value=3e-13 Score=123.89 Aligned_cols=235 Identities=18% Similarity=0.236 Sum_probs=156.7
Q ss_pred EEEEEEEcCCCcEEEEEEecccccCCc-ccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC-----eEEEEEeccCCCch
Q 010013 82 VTYLVTHKDTKQQFACKSISSRKLINR-DDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH-----SVNLIMDLCAGGEL 155 (520)
Q Consensus 82 ~Vy~~~~~~~~~~~avK~~~~~~~~~~-~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~-----~~~lv~e~~~g~~L 155 (520)
.||++.++..|-+|+--.+......+. .+-+..+.-...|-++. |.|||++..|+.+.. ...++.||+.-|+|
T Consensus 81 ~v~lamd~e~g~evvwneVq~~~rK~~~~qeek~~~vFdnllqlv-HsnlvkfH~yw~d~K~~e~~rviFiteymssgs~ 159 (458)
T KOG1266|consen 81 DVYLAMDTEEGVEVVWNEVQFSERKNPKEQEEKRRAVFDNLLQLV-HSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSL 159 (458)
T ss_pred HHHHHhhhccCchhhHHHHHHHHhcChhhCHHHHHHHHHHHHHHH-HHHHHHHHHhhcccccccccceEEEEecccchhH
Confidence 467777777666655433322111111 12233444555667777 999999998876543 47889999999999
Q ss_pred HHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHcC--CeeecCCCCcEEeecCCCCCCeeEeecccccccCCC----C
Q 010013 156 FDRIIAK----GHYSERAAANLCRQMVTVVHYCHSMG--VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG----D 225 (520)
Q Consensus 156 ~~~l~~~----~~l~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~----~ 225 (520)
..+|++. ..+......+|+-||+.||.|||+.. |+|+++..+-|++. .++-+|+.- +.-....+. .
T Consensus 160 ~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq---~ngLIkig~-~ap~s~h~s~~~~~ 235 (458)
T KOG1266|consen 160 KQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQ---HNGLIKIGS-VAPDSTHPSVNSTR 235 (458)
T ss_pred HHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeec---CCceEEecc-cCccccchhhhhhh
Confidence 9999764 34788889999999999999999874 99999999999994 566666542 111111110 0
Q ss_pred --cccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhhCCCC-CCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHH
Q 010013 226 --VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPP-FWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (520)
Q Consensus 226 --~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~g~~p-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (520)
....-.+-++|.+||.=. .+.+..+|||+||.-.+++..+..- -.+.+....-..+.+-.+... ...-+
T Consensus 236 ~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~le-------n~lqr 308 (458)
T KOG1266|consen 236 EAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIGLE-------NGLQR 308 (458)
T ss_pred HhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheeecc-------Ccccc
Confidence 111224568899999743 3456789999999989998887654 222222222222322222211 12345
Q ss_pred HHHHHhcccCCCCCCCHHHHHcCCccc
Q 010013 302 DIVKKMLHADPKERLSAAEVLNHPWMR 328 (520)
Q Consensus 302 ~li~~~l~~dp~~Rps~~~~l~~~~~~ 328 (520)
+++.+||...|+.||+++++|.||..-
T Consensus 309 ~~i~kcl~~eP~~rp~ar~llfHpllf 335 (458)
T KOG1266|consen 309 GSITKCLEGEPNGRPDARLLLFHPLLF 335 (458)
T ss_pred CcCcccccCCCCCCcchhhhhcCceee
Confidence 789999999999999999999999753
|
|
| >KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.41 E-value=7.8e-13 Score=120.82 Aligned_cols=132 Identities=25% Similarity=0.344 Sum_probs=107.8
Q ss_pred hhHHHHhcccCCCCCCcccHHHHhhhhhhcC-CCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccch-----hhhHHH
Q 010013 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLG-TRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNR-----VEREEH 446 (520)
Q Consensus 373 ~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~-~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~-----~~~~~~ 446 (520)
.+-++.|+..|.|+||.++.+||..+|.--- ..+..=-|..-+..+|+|+||+|+++||+.-+..... .....+
T Consensus 163 ~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~~~~~epeWv~~E 242 (325)
T KOG4223|consen 163 ARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHEGNEEEPEWVLTE 242 (325)
T ss_pred HHHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhccCCCCCccccccc
Confidence 3456889999999999999999999885432 2233334688888999999999999999987664432 223344
Q ss_pred HHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHH
Q 010013 447 LYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAA 504 (520)
Q Consensus 447 ~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~ 504 (520)
-...|..+|+|+||+++.+|++..+..-+.. .+.+++-++.+.|.|+||++|++|.+.
T Consensus 243 re~F~~~~DknkDG~L~~dEl~~WI~P~~~d~A~~EA~hL~~eaD~dkD~kLs~eEIl~ 301 (325)
T KOG4223|consen 243 REQFFEFRDKNKDGKLDGDELLDWILPSEQDHAKAEARHLLHEADEDKDGKLSKEEILE 301 (325)
T ss_pred HHHHHHHhhcCCCCccCHHHHhcccCCCCccHHHHHHHHHhhhhccCccccccHHHHhh
Confidence 5678889999999999999999888777766 778899999999999999999999876
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.39 E-value=3.9e-13 Score=133.67 Aligned_cols=254 Identities=20% Similarity=0.203 Sum_probs=184.6
Q ss_pred ccccceeecceeeccCCeEEEEEEEc-CCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHK-DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~ 142 (520)
....+|..+..||.|.|+.|+.+... .++..|++|.......... ....-..|+.+...+..|.+++.++..+.....
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~-~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~ 340 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFA-SDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQ 340 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchH-hhhcchhhhhHhhHhhcccccCCCCCCcccccc
Confidence 34567888899999999999998755 5778899987654332221 222234677777777779999998887777777
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
.|+--|||.++++...+.-...+.+...+.+..|++.++.++|+..++|+|+||+||++..++ +..++.|||....+.
T Consensus 341 ~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~--~~~~~~~~~~~t~~~ 418 (524)
T KOG0601|consen 341 GYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDG--FFSKLGDFGCWTRLA 418 (524)
T ss_pred ccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccch--hhhhccccccccccc
Confidence 789999999999877665556688889999999999999999999999999999999996432 778999999886422
Q ss_pred CCCcccccccCCCcc-Cchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHH
Q 010013 223 PGDVFKDLVGSAYYV-APEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (520)
Q Consensus 223 ~~~~~~~~~gt~~y~-aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (520)
-. .....+.-.+. .+|++.. .+..+.|++|||..+.+.++|...-+.... ...+..+.... .++....
T Consensus 419 ~~--~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~---~~~i~~~~~p~----~~~~~~~ 489 (524)
T KOG0601|consen 419 FS--SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ---SLTIRSGDTPN----LPGLKLQ 489 (524)
T ss_pred ee--cccccccccccccchhhccccccccccccccccccccccccCcccCccccc---ceeeecccccC----CCchHHh
Confidence 11 11112233344 3555543 467899999999999999988654322211 22233332222 1344477
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHcCCcccc
Q 010013 300 AKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 300 ~~~li~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
+..+...++.+++..||++.++..|.-|..
T Consensus 490 ~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~ 519 (524)
T KOG0601|consen 490 LQVLLKVMINPDRKRRPSAVELSLHSEFYR 519 (524)
T ss_pred hhhhhhhhcCCccccchhhhhhcccchhhh
Confidence 888999999999999999999988876653
|
|
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.6e-10 Score=111.21 Aligned_cols=212 Identities=18% Similarity=0.240 Sum_probs=155.3
Q ss_pred CCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEE----eCCeEEEEEeccCC-C
Q 010013 79 QFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE----DRHSVNLIMDLCAG-G 153 (520)
Q Consensus 79 ~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~----~~~~~~lv~e~~~g-~ 153 (520)
-..+.|++....+|..|++|+++-...... ...-.-+++++++. |+|||++.+++. .+..+++|++|.++ +
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~---nk~t~lve~wkkl~-h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~ 363 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQST---NKDTSLVEAWKKLC-HTNVVPFREVFLTYTFGDLSLVLVYDYYPSSP 363 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCc---ccchHHHHHHHHhc-cCceeehhhhhhhhccCcceEEEEEecCCCCc
Confidence 345789999999999999999953332222 12223466789998 999999998876 35678999999987 6
Q ss_pred chHHHHHh---------------cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccc
Q 010013 154 ELFDRIIA---------------KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218 (520)
Q Consensus 154 ~L~~~l~~---------------~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a 218 (520)
+|.++.-. +...++..+|.++.||..||.++|+.|+.-+-|.|.+||+.. +-+++|...|+.
T Consensus 364 TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G---~~RIriS~C~i~ 440 (655)
T KOG3741|consen 364 TLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTG---KMRIRISGCGIM 440 (655)
T ss_pred hHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeC---cceEEEecccce
Confidence 77775522 224778999999999999999999999999999999999953 336899888887
Q ss_pred cccCCCCcccccccCCCccCchhhcccCCCcchhHHHHHHHHHHhhCCCC-CCCCCHHHH-HHHHHcCCCCCCCCCCCCC
Q 010013 219 VFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPP-FWGETEQSI-FDAILRGHIDFSSDPWPNI 296 (520)
Q Consensus 219 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~Dv~slG~~l~~ll~g~~p-f~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 296 (520)
..+.... + +.+.+ -.+.|.=.||.+++.|.||..- +......+. ...|. ..+
T Consensus 441 Dvl~~d~------~-------~~le~--~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~I~-----------~~y 494 (655)
T KOG3741|consen 441 DVLQEDP------T-------EPLES--QQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTRIT-----------TTY 494 (655)
T ss_pred eeecCCC------C-------cchhH--HhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHhh-----------hhh
Confidence 7665432 0 11111 2356999999999999999654 222223332 33332 356
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 297 SSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 297 ~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
+.+++++|.-+...++++ -++.+++.+
T Consensus 495 S~D~rn~v~yl~s~~~~~-ksI~~llp~ 521 (655)
T KOG3741|consen 495 STDLRNVVEYLESLNFRE-KSIQDLLPM 521 (655)
T ss_pred hHHHHHHHHHHHhcCccc-ccHHHHHHH
Confidence 788999999999888877 688888764
|
|
| >KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.35 E-value=5.6e-12 Score=100.50 Aligned_cols=147 Identities=21% Similarity=0.457 Sum_probs=107.1
Q ss_pred hhhhHHHHhhHHHHhcccCCCC-----C------CcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHH
Q 010013 365 ENLSEEEIMGLKEMFKSMDTDN-----S------GTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFIT 433 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D~~~-----~------g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~ 433 (520)
..++.+++-++...|..+..+- . -.+..+.+.+ +..+..++-+. ++.+.+..||+|.++|++|+.
T Consensus 20 TFFtrKdIlrl~~Rf~~L~P~lVP~~~~~~~~~~v~vp~e~i~k-MPELkenpfk~---ri~e~FSeDG~GnlsfddFlD 95 (189)
T KOG0038|consen 20 TFFTRKDILRLHKRFYELAPHLVPTDMTGNRPPIVKVPFELIEK-MPELKENPFKR---RICEVFSEDGRGNLSFDDFLD 95 (189)
T ss_pred ccccHHHHHHHHHHHHHhCcccccccccCCCCCceeecHHHHhh-ChhhhcChHHH---HHHHHhccCCCCcccHHHHHH
Confidence 4456666666666666554331 1 2444444443 55666666554 555666689999999999999
Q ss_pred Hhhccc-hhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC--CHHH----HHHHHHHhcCCCCcceeHHHHHHHH
Q 010013 434 ATMHMN-RVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG--DAKT----IKEIIAEVDIDNDGRINYEEFAAMM 506 (520)
Q Consensus 434 ~~~~~~-~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~--~~~~----~~~~~~~~d~~~dg~i~~~ef~~~l 506 (520)
++.-+. ..+..-.+.-+|+.||-|+|++|...+|...+..+... ++++ ++.++.++|.||||+|++.||..++
T Consensus 96 mfSV~sE~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~eLs~eEv~~i~ekvieEAD~DgDgkl~~~eFe~~i 175 (189)
T KOG0038|consen 96 MFSVFSEMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRDELSDEEVELICEKVIEEADLDGDGKLSFAEFEHVI 175 (189)
T ss_pred HHHHHHhhChHHhhhhheeEEeecCCCCcccHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHH
Confidence 766432 33556678889999999999999999999999887554 5554 6778899999999999999999998
Q ss_pred HcCCCCCCCC
Q 010013 507 RKGNPDMVGN 516 (520)
Q Consensus 507 ~~~~~~~~~~ 516 (520)
.+ .||+...
T Consensus 176 ~r-aPDFlsT 184 (189)
T KOG0038|consen 176 LR-APDFLST 184 (189)
T ss_pred Hh-CcchHhh
Confidence 87 6666543
|
|
| >PLN02964 phosphatidylserine decarboxylase | Back alignment and domain information |
|---|
Probab=99.34 E-value=5.9e-12 Score=129.33 Aligned_cols=105 Identities=19% Similarity=0.288 Sum_probs=94.1
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcC-CCCCHHH---HHHHHHHhcCCCCCceehhhhHHHhhccch
Q 010013 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLG-TRLSESE---VRQLMEAADVDGNGTIDYIEFITATMHMNR 440 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~-~~~~~~~---~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~ 440 (520)
..++..+++++.+.|..+|.|++|.+ +..++..+| ..+++++ ++.+|..+|.|++|.|+|+||+.++..+..
T Consensus 135 t~f~~kqi~elkeaF~lfD~dgdG~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg~ 210 (644)
T PLN02964 135 FDFVTQEPESACESFDLLDPSSSNKV----VGSIFVSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFGN 210 (644)
T ss_pred hhccHHHHHHHHHHHHHHCCCCCCcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcc
Confidence 34566778899999999999999997 888888999 5888877 899999999999999999999998876665
Q ss_pred hhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHh
Q 010013 441 VEREEHLYKAFEYFDKDNSGYITMEELEHALKK 473 (520)
Q Consensus 441 ~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~ 473 (520)
..+.++++.+|+.||.|++|+|+.+||+.++..
T Consensus 211 ~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 211 LVAANKKEELFKAADLNGDGVVTIDELAALLAL 243 (644)
T ss_pred CCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 567888999999999999999999999999988
|
|
| >KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.33 E-value=7.7e-12 Score=107.62 Aligned_cols=101 Identities=25% Similarity=0.346 Sum_probs=92.9
Q ss_pred HHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC------CHHH
Q 010013 408 ESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG------DAKT 481 (520)
Q Consensus 408 ~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~------~~~~ 481 (520)
..++..+|..+|.+++|.|+-.|+-.++..+....+..++..+++.+|.|++|.|+.+||..++...+.. ..++
T Consensus 7 ~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~~~~~e 86 (151)
T KOG0027|consen 7 ILELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEEASSEE 86 (151)
T ss_pred HHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccccccccHHH
Confidence 3568999999999999999999999999988888999999999999999999999999999999876553 2348
Q ss_pred HHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 482 IKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 482 ~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
+.++|+.+|.|+||.||++|+..+|.+
T Consensus 87 l~eaF~~fD~d~~G~Is~~el~~~l~~ 113 (151)
T KOG0027|consen 87 LKEAFRVFDKDGDGFISASELKKVLTS 113 (151)
T ss_pred HHHHHHHHccCCCCcCcHHHHHHHHHH
Confidence 999999999999999999999999987
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.29 E-value=3.2e-11 Score=121.32 Aligned_cols=184 Identities=15% Similarity=0.162 Sum_probs=131.7
Q ss_pred eeecceeeccCCeEEE-EEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEE
Q 010013 69 YIFGRELGRGQFGVTY-LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147 (520)
Q Consensus 69 y~~~~~lg~G~~g~Vy-~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~ 147 (520)
|.+ ...+-++.+ +| .|..+.++.++.|..++...- ...+...+-++-|+.++ ||+|+++++.++..+..|+|+
T Consensus 15 Y~l-e~~~~~~~a-~~~~~t~k~~~~~vsVF~~~~~~~---~~~~~~~~A~k~lKtlR-HP~Il~yL~t~e~~~~~ylvT 88 (690)
T KOG1243|consen 15 YDL-EETAFSSEA-LWPDGTRKADGGPVSVFVYKRSNG---EVTELAKRAVKRLKTLR-HPNILSYLDTTEEEGTLYLVT 88 (690)
T ss_pred ccc-ccccCCCcc-cccccceeccCCceEEEEEeCCCc---hhhHHHHHHHHHhhhcc-CchhhhhhhhhcccCceEEEe
Confidence 444 333334443 44 466677788888888754322 33466778888999999 999999999999999999999
Q ss_pred eccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCc
Q 010013 148 DLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCH-SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226 (520)
Q Consensus 148 e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH-~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 226 (520)
|.+. -|..++.+. ....+..-+.||+.||.+|| +.+++|++|..+.|+|+ ..+..||++|.++........
T Consensus 89 ErV~--Pl~~~lk~l---~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn---~~GeWkLggle~v~~~~~~~~ 160 (690)
T KOG1243|consen 89 ERVR--PLETVLKEL---GKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVN---ESGEWKLGGLELVSKASGFNA 160 (690)
T ss_pred eccc--cHHHHHHHh---HHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEc---CCCcEEEeeeEEEeccccCCc
Confidence 9884 455566553 37778888999999999998 67899999999999995 567799999998765432211
Q ss_pred -ccccccCCCccCchhhcccCCCcchhHHHHHHHHHHhhCCC
Q 010013 227 -FKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVP 267 (520)
Q Consensus 227 -~~~~~gt~~y~aPE~~~~~~~~~~Dv~slG~~l~~ll~g~~ 267 (520)
.....---.|..|+.+... +-..|.|-|||++++++.|..
T Consensus 161 ~~~~~~~~~s~~~P~~~~~s-~~s~D~~~Lg~li~el~ng~~ 201 (690)
T KOG1243|consen 161 PAKSLYLIESFDDPEEIDPS-EWSIDSWGLGCLIEELFNGSL 201 (690)
T ss_pred ccccchhhhcccChhhcCcc-ccchhhhhHHHHHHHHhCccc
Confidence 0111111235556543211 124699999999999999833
|
|
| >COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.25 E-value=4.4e-11 Score=100.42 Aligned_cols=100 Identities=21% Similarity=0.288 Sum_probs=90.8
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCC-C-CHHHHHHHH
Q 010013 409 SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNM-G-DAKTIKEII 486 (520)
Q Consensus 409 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~-~-~~~~~~~~~ 486 (520)
+++++.|..+|.|++|.|+..++..++...+...+...+..+|..+|. +.|.|+..+|..+|..... . .++++.++|
T Consensus 20 ~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~~~~~Eel~~aF 98 (160)
T COG5126 20 QELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLKRGDKEEELREAF 98 (160)
T ss_pred HHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 346778888899999999999999999988888999999999999999 9999999999999986543 3 688999999
Q ss_pred HHhcCCCCcceeHHHHHHHHHcC
Q 010013 487 AEVDIDNDGRINYEEFAAMMRKG 509 (520)
Q Consensus 487 ~~~d~~~dg~i~~~ef~~~l~~~ 509 (520)
+.+|.|+||+|++.|++.+++..
T Consensus 99 ~~fD~d~dG~Is~~eL~~vl~~l 121 (160)
T COG5126 99 KLFDKDHDGYISIGELRRVLKSL 121 (160)
T ss_pred HHhCCCCCceecHHHHHHHHHhh
Confidence 99999999999999999999863
|
|
| >PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.1e-11 Score=87.99 Aligned_cols=61 Identities=46% Similarity=0.767 Sum_probs=53.5
Q ss_pred HHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-----CHHHHHHHHHHhcCCCCcceeHHHHHHHH
Q 010013 446 HLYKAFEYFDKDNSGYITMEELEHALKKYNMG-----DAKTIKEIIAEVDIDNDGRINYEEFAAMM 506 (520)
Q Consensus 446 ~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-----~~~~~~~~~~~~d~~~dg~i~~~ef~~~l 506 (520)
.++.+|+.||+|++|+|+.+||..++..++.. ..+.++.+|+.+|.|+||.|+|+||+++|
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 37889999999999999999999999998864 23456667999999999999999999875
|
... |
| >cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13 | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.8e-11 Score=92.37 Aligned_cols=65 Identities=18% Similarity=0.346 Sum_probs=59.4
Q ss_pred HHHHHHHHhhhcC-CCCCceeHHHHHHHHHh-cCCC-CH-HHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 444 EEHLYKAFEYFDK-DNSGYITMEELEHALKK-YNMG-DA-KTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 444 ~~~~~~~F~~~D~-d~dG~I~~~El~~~l~~-~~~~-~~-~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
-..+..+|+.||. +++|+|+.+||+.++.. +|.. +. ++++++|+.+|.|+||.|+|+||+.+|..
T Consensus 7 i~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~ 75 (89)
T cd05022 7 IETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGE 75 (89)
T ss_pred HHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 3568899999999 99999999999999998 8865 55 88999999999999999999999999865
|
S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu |
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.1e-10 Score=107.85 Aligned_cols=143 Identities=25% Similarity=0.396 Sum_probs=104.3
Q ss_pred ceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCC-CCeeEEEEEEEeC---CeEEEEEe
Q 010013 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH-RNIVELKGAYEDR---HSVNLIMD 148 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~h-p~iv~l~~~~~~~---~~~~lv~e 148 (520)
+.|+.|.++.||++...+ |..+++|........ .....+..|+.+++.+..+ ..+++++.+.... +..++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEecC-CcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence 578999999999998754 578999987543221 1345688999999999732 3467777776553 36689999
Q ss_pred ccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH------------------------------------------
Q 010013 149 LCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS------------------------------------------ 186 (520)
Q Consensus 149 ~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~------------------------------------------ 186 (520)
|++|.++.+.+.. ..++......++.+++.+|..||+
T Consensus 81 ~i~G~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (223)
T cd05154 81 RVDGRVLRDRLLR-PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER 159 (223)
T ss_pred EeCCEecCCCCCC-CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence 9999888765432 346666677777777777777773
Q ss_pred --------------cCCeeecCCCCcEEeecCCCCCCeeEeecccccc
Q 010013 187 --------------MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (520)
Q Consensus 187 --------------~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 220 (520)
..++|+|++|.||+++.+ .++.+.|+||+.+..
T Consensus 160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~-~~~~~~iID~e~~~~ 206 (223)
T cd05154 160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPD-EPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHhhCCCCCCcEEEECCCCcccEEEcCC-CCcEEEEEecccccc
Confidence 236999999999999532 145688999998764
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.3e-10 Score=98.96 Aligned_cols=127 Identities=26% Similarity=0.370 Sum_probs=105.1
Q ss_pred hhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHH
Q 010013 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREE 445 (520)
Q Consensus 366 ~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~ 445 (520)
.|+.+. +.-+...||.+++|+|..+||..+...+ ..|+.+|..+|+|++|+|+..|+-.++..+....+.+
T Consensus 90 ~Fs~~T---crlmI~mfd~~~~G~i~f~EF~~Lw~~i------~~Wr~vF~~~D~D~SG~I~~sEL~~Al~~~Gy~Lspq 160 (221)
T KOG0037|consen 90 PFSIET---CRLMISMFDRDNSGTIGFKEFKALWKYI------NQWRNVFRTYDRDRSGTIDSSELRQALTQLGYRLSPQ 160 (221)
T ss_pred CCCHHH---HHHHHHHhcCCCCCccCHHHHHHHHHHH------HHHHHHHHhcccCCCCcccHHHHHHHHHHcCcCCCHH
Confidence 444444 3455567788999999999999988775 4789999999999999999999999988888888888
Q ss_pred HHHHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcc--eeHHHHHHHH
Q 010013 446 HLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGR--INYEEFAAMM 506 (520)
Q Consensus 446 ~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~--i~~~ef~~~l 506 (520)
....+++.||..++|.|.+++|.+++-.+ ..+.+.|+..|.+.+|. |+|++|+.+.
T Consensus 161 ~~~~lv~kyd~~~~g~i~FD~FI~ccv~L-----~~lt~~Fr~~D~~q~G~i~~~y~dfl~~t 218 (221)
T KOG0037|consen 161 FYNLLVRKYDRFGGGRIDFDDFIQCCVVL-----QRLTEAFRRRDTAQQGSITISYDDFLQMT 218 (221)
T ss_pred HHHHHHHHhccccCCceeHHHHHHHHHHH-----HHHHHHHHHhccccceeEEEeHHHHHHHh
Confidence 89999999998889999999999888755 34678899999988885 6899998764
|
|
| >COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.19 E-value=7.4e-10 Score=105.47 Aligned_cols=238 Identities=18% Similarity=0.189 Sum_probs=155.3
Q ss_pred eecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEE------E-EeCCe
Q 010013 70 IFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGA------Y-EDRHS 142 (520)
Q Consensus 70 ~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~------~-~~~~~ 142 (520)
..+..||+|+-+.+|..-.-. ..+.|+++.-.. .... +.+..|.+...||-+-.=+.+ . .....
T Consensus 14 ~~gr~LgqGgea~ly~l~e~~---d~VAKIYh~Ppp---a~~a---qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~ 84 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEVR---DQVAKIYHAPPP---AAQA---QKVAELAATPDAPLLNYRVAWPQATLHGGRRGKV 84 (637)
T ss_pred CCCccccCCccceeeecchhh---chhheeecCCCc---hHHH---HHHHHhccCCCCcchhhhhcccHHHhhCCCccce
Confidence 456889999999999765433 246688864332 1111 222334444446644331111 1 12233
Q ss_pred EEEEEeccCCCchHHHHH-------hcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeec
Q 010013 143 VNLIMDLCAGGELFDRII-------AKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDF 215 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~-------~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Df 215 (520)
..++|..++|..--..+. ......+....+.++.|+.+.+.||+.|.+-+|++++|||++ ++..+.|+|-
T Consensus 85 iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVs---d~~~V~LVds 161 (637)
T COG4248 85 IGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVS---DDSKVVLVDS 161 (637)
T ss_pred eEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeee---cCceEEEEcc
Confidence 778898887753222221 122377899999999999999999999999999999999994 5667899885
Q ss_pred ccccccCCCCcccccccCCCccCchhhc-c-----cCCCcchhHHHHHHHHHHhhC-CCCCCCCCHH-----HHHHHHHc
Q 010013 216 GLSVFFKPGDVFKDLVGSAYYVAPEVLR-R-----NYGAEADIWSAGVILYILLSG-VPPFWGETEQ-----SIFDAILR 283 (520)
Q Consensus 216 g~a~~~~~~~~~~~~~gt~~y~aPE~~~-~-----~~~~~~Dv~slG~~l~~ll~g-~~pf~~~~~~-----~~~~~~~~ 283 (520)
..-.....+......+|...|.+||... + .-+...|.|.||+++++|+.| +.||.+.... ..-..|..
T Consensus 162 Dsfqi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~ 241 (637)
T COG4248 162 DSFQINANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAH 241 (637)
T ss_pred cceeeccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhc
Confidence 5433333344445568999999999764 2 246689999999999999986 9999664310 01112221
Q ss_pred CC-----------CC-CCCCCCCCCCHHHHHHHHHhccc--CCCCCCCHH
Q 010013 284 GH-----------ID-FSSDPWPNISSSAKDIVKKMLHA--DPKERLSAA 319 (520)
Q Consensus 284 ~~-----------~~-~~~~~~~~~~~~~~~li~~~l~~--dp~~Rps~~ 319 (520)
+. .+ ....+|.-+++.+..++.+|+.. ++.-|||++
T Consensus 242 g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~ 291 (637)
T COG4248 242 GRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAK 291 (637)
T ss_pred ceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHH
Confidence 11 11 11234567889999999999864 356899874
|
|
| >PTZ00183 centrin; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.3e-10 Score=99.65 Aligned_cols=100 Identities=26% Similarity=0.378 Sum_probs=86.3
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhc-CC-CCHHHHHHHH
Q 010013 409 SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY-NM-GDAKTIKEII 486 (520)
Q Consensus 409 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~-~~-~~~~~~~~~~ 486 (520)
.+++.+|..+|.+++|.|++.||..++...........+..+|+.+|.+++|.|+.+||..++... .. ...+.++.+|
T Consensus 17 ~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F 96 (158)
T PTZ00183 17 KEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDPREEILKAF 96 (158)
T ss_pred HHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 457888999999999999999999888765444566789999999999999999999999988653 22 2667899999
Q ss_pred HHhcCCCCcceeHHHHHHHHHc
Q 010013 487 AEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 487 ~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..+|.+++|.|+++||..++..
T Consensus 97 ~~~D~~~~G~i~~~e~~~~l~~ 118 (158)
T PTZ00183 97 RLFDDDKTGKISLKNLKRVAKE 118 (158)
T ss_pred HHhCCCCCCcCcHHHHHHHHHH
Confidence 9999999999999999999875
|
|
| >cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.5e-10 Score=87.39 Aligned_cols=64 Identities=17% Similarity=0.423 Sum_probs=58.6
Q ss_pred HHHHHHHhhhc-CCCCC-ceeHHHHHHHHHh-----cCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 445 EHLYKAFEYFD-KDNSG-YITMEELEHALKK-----YNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 445 ~~~~~~F~~~D-~d~dG-~I~~~El~~~l~~-----~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..++.+|+.|| .|++| +|+.+||+.+|+. +|.. ++++++++++.+|.|+||.|+|+||+.++..
T Consensus 8 ~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~ 79 (88)
T cd05027 8 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAM 79 (88)
T ss_pred HHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 46889999998 79999 5999999999998 7776 7888999999999999999999999998864
|
S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i |
| >PTZ00184 calmodulin; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=4.7e-10 Score=96.63 Aligned_cols=100 Identities=25% Similarity=0.324 Sum_probs=85.8
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCC-C-CHHHHHHHH
Q 010013 409 SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNM-G-DAKTIKEII 486 (520)
Q Consensus 409 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~-~-~~~~~~~~~ 486 (520)
+++...|..+|.+++|.|+++||..++.........+.+..+|+.+|.+++|.|+.+||..++..... . ..+.+..+|
T Consensus 11 ~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~F 90 (149)
T PTZ00184 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDTDSEEEIKEAF 90 (149)
T ss_pred HHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 45778899999999999999999988765544455678999999999999999999999999876432 2 456789999
Q ss_pred HHhcCCCCcceeHHHHHHHHHc
Q 010013 487 AEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 487 ~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..+|.+++|.|+.+||..++..
T Consensus 91 ~~~D~~~~g~i~~~e~~~~l~~ 112 (149)
T PTZ00184 91 KVFDRDGNGFISAAELRHVMTN 112 (149)
T ss_pred HhhCCCCCCeEeHHHHHHHHHH
Confidence 9999999999999999999875
|
|
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.2e-09 Score=100.82 Aligned_cols=137 Identities=21% Similarity=0.162 Sum_probs=96.1
Q ss_pred eEEEEEEEcCCCcEEEEEEecccccC----C----cccHHHHHHHHHHHHhccCCCCe--eEEEEEEEe-----CCeEEE
Q 010013 81 GVTYLVTHKDTKQQFACKSISSRKLI----N----RDDVEDVRREVQIMHHLTGHRNI--VELKGAYED-----RHSVNL 145 (520)
Q Consensus 81 g~Vy~~~~~~~~~~~avK~~~~~~~~----~----~~~~~~~~~e~~~l~~l~~hp~i--v~l~~~~~~-----~~~~~l 145 (520)
..|+++.. .|+.|.||........ . ..-...+.+|...+.+|. .-+| +.++.+++. ....++
T Consensus 36 rrvvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~-~~GIptP~pVa~~e~~~~~~~~~s~L 112 (268)
T PRK15123 36 RRTLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLH-EVGVDTMTGVAFGERGSNPATRTSFI 112 (268)
T ss_pred ceEEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHH-HcCCCCCCeeEEEEecCCCccceeEE
Confidence 34666654 4578889976332210 0 001124778999998886 3333 344555543 235789
Q ss_pred EEeccCCC-chHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecC----CCCCCeeEeecccc
Q 010013 146 IMDLCAGG-ELFDRIIA--KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSS----AEDSPLKATDFGLS 218 (520)
Q Consensus 146 v~e~~~g~-~L~~~l~~--~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~----~~~~~~kl~Dfg~a 218 (520)
|||++++. +|.+++.. ....+......++.+++..+..||+.||+|+|+++.|||+... .+...+.|+||+.+
T Consensus 113 Vte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~ 192 (268)
T PRK15123 113 ITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRA 192 (268)
T ss_pred EEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcc
Confidence 99999886 78887753 3456677788999999999999999999999999999999741 33567999999988
Q ss_pred cc
Q 010013 219 VF 220 (520)
Q Consensus 219 ~~ 220 (520)
..
T Consensus 193 ~~ 194 (268)
T PRK15123 193 QI 194 (268)
T ss_pred cc
Confidence 64
|
|
| >PLN02964 phosphatidylserine decarboxylase | Back alignment and domain information |
|---|
Probab=99.10 E-value=5.5e-10 Score=115.02 Aligned_cols=125 Identities=14% Similarity=0.223 Sum_probs=94.6
Q ss_pred HhcccCCCCCCcccHHHHhhhhhh-c-C-CCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHH---HHHHHH
Q 010013 378 MFKSMDTDNSGTITFEELKAGLPK-L-G-TRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREE---HLYKAF 451 (520)
Q Consensus 378 ~F~~~D~~~~g~i~~~e~~~~l~~-~-~-~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~---~~~~~F 451 (520)
-|+.+|++ .++.+++...... + . .....+++.+.|..+|.|++|.+ +...+..+.. ...++. .++.+|
T Consensus 112 ~~~~~~~~---~~s~n~lv~~~e~~~t~f~~kqi~elkeaF~lfD~dgdG~i-Lg~ilrslG~--~~pte~e~~fi~~mf 185 (644)
T PLN02964 112 RISVFETN---RLSKNTLVGYCELDLFDFVTQEPESACESFDLLDPSSSNKV-VGSIFVSCSI--EDPVETERSFARRIL 185 (644)
T ss_pred EEEEEecC---CCCHHHhhhheeecHhhccHHHHHHHHHHHHHHCCCCCCcC-HHHHHHHhCC--CCCCHHHHHHHHHHH
Confidence 67777764 4666666654433 1 1 11123567888999999999997 4444333321 123333 489999
Q ss_pred hhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 452 EYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 452 ~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
+.+|.|++|.|+.+||..++..++.. +++++.++|+.+|.|+||.|+++||..+|+.
T Consensus 186 ~~~D~DgdG~IdfdEFl~lL~~lg~~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 186 AIVDYDEDGQLSFSEFSDLIKAFGNLVAANKKEELFKAADLNGDGVVTIDELAALLAL 243 (644)
T ss_pred HHhCCCCCCeEcHHHHHHHHHHhccCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 99999999999999999999988865 7888999999999999999999999999987
|
|
| >cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13 | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.4e-10 Score=88.51 Aligned_cols=70 Identities=20% Similarity=0.299 Sum_probs=63.3
Q ss_pred HHHHhhHHHHhcccCC-CCCCcccHHHHhhhhhh-cCCCCCH-HHHHHHHHHhcCCCCCceehhhhHHHhhcc
Q 010013 369 EEEIMGLKEMFKSMDT-DNSGTITFEELKAGLPK-LGTRLSE-SEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (520)
Q Consensus 369 ~~~~~~l~~~F~~~D~-~~~g~i~~~e~~~~l~~-~~~~~~~-~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 438 (520)
+..+..|..+|+.||. +++|+|+..||+.++.. ++..++. ++++.++..+|.|+||.|+|+||+.++...
T Consensus 4 E~ai~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l 76 (89)
T cd05022 4 EKAIETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGEL 76 (89)
T ss_pred HHHHHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 3556779999999999 99999999999999999 8877777 899999999999999999999999887644
|
S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu |
| >KOG2137 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.08 E-value=8.7e-11 Score=118.69 Aligned_cols=151 Identities=19% Similarity=0.334 Sum_probs=109.3
Q ss_pred HHHHHHHHHHH-cCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC-----cccc-----cccCCCccCchhhcc
Q 010013 176 QMVTVVHYCHS-MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD-----VFKD-----LVGSAYYVAPEVLRR 244 (520)
Q Consensus 176 qi~~~l~~LH~-~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~-----~~gt~~y~aPE~~~~ 244 (520)
+.+.|+.++|. .++||++|.|++|.++ .++.+||+.|+++....++. .++. ......|.|||++.+
T Consensus 107 ~v~dgl~flh~sAk~VH~ni~p~~i~~n---a~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 107 NVADGLAFLHRSAKVVHGNIQPEAIVVN---ANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred cccchhhhhccCcceeecccchhheeec---cCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 34489999996 4899999999999995 56679999999987765421 1111 234567999999875
Q ss_pred c-CCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCC-CCCCCCCHHHHHHHHHhcccCCCCCCCHHHH
Q 010013 245 N-YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSS-DPWPNISSSAKDIVKKMLHADPKERLSAAEV 321 (520)
Q Consensus 245 ~-~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~ 321 (520)
. .+.++|+||+|+++|.+.. |+.-+.......... .......... ....++|+++++-+.+++..++.-||++..+
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~-~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l 262 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYS-FSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLL 262 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhccCCcchhh-hhhcccccccccccccCcHHHHHHHHHHhcCCcccCcchhhh
Confidence 4 7889999999999999984 555554433222211 1111111111 1115789999999999999999999999999
Q ss_pred HcCCccccC
Q 010013 322 LNHPWMRVD 330 (520)
Q Consensus 322 l~~~~~~~~ 330 (520)
+..|||...
T Consensus 263 ~~~~ff~D~ 271 (700)
T KOG2137|consen 263 LSIPFFSDP 271 (700)
T ss_pred hcccccCCc
Confidence 999999753
|
|
| >PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.1e-10 Score=83.59 Aligned_cols=61 Identities=39% Similarity=0.668 Sum_probs=45.2
Q ss_pred hHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHH----HHHHHHHHhcCCCCCceehhhhHHH
Q 010013 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSES----EVRQLMEAADVDGNGTIDYIEFITA 434 (520)
Q Consensus 374 ~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~----~~~~~~~~~d~~~~g~i~~~ef~~~ 434 (520)
+|.++|+.+|.|++|+|+.+||..++..++...... .++.+|..+|.|++|.|+|+||+.+
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~ 65 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNF 65 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhcc
Confidence 467888888888888888888888888877554443 3455577777777777777777664
|
... |
| >KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.1e-09 Score=95.50 Aligned_cols=120 Identities=22% Similarity=0.273 Sum_probs=97.1
Q ss_pred CCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCC-CCceehhhhHHHhhccc-hhhhHHHHHHHHhhhcCCCCCceeH
Q 010013 387 SGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG-NGTIDYIEFITATMHMN-RVEREEHLYKAFEYFDKDNSGYITM 464 (520)
Q Consensus 387 ~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~-~g~i~~~ef~~~~~~~~-~~~~~~~~~~~F~~~D~d~dG~I~~ 464 (520)
...++...+.++...- ..+..+++.+++.|=.+. .|.++-++|..++...- ..........+|+.+|.|+||.|+.
T Consensus 6 ~~~~~~~~~e~l~~~t--~f~~~ei~~~Yr~Fk~~cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F 83 (193)
T KOG0044|consen 6 NSKLQPESLEQLVQQT--KFSKKEIQQWYRGFKNECPSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDF 83 (193)
T ss_pred cccCCcHHHHHHHHhc--CCCHHHHHHHHHHhcccCCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCH
Confidence 3445555555544332 357889999999996654 79999999999877543 4567778999999999999999999
Q ss_pred HHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 465 EELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 465 ~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.||...+...... .++.++..|+.+|.|+||.|+++|++.+++.
T Consensus 84 ~Efi~als~~~rGt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~ 128 (193)
T KOG0044|consen 84 LEFICALSLTSRGTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQA 128 (193)
T ss_pred HHHHHHHHHHcCCcHHHHhhhhheeecCCCCceEcHHHHHHHHHH
Confidence 9999998877666 6677889999999999999999999999875
|
|
| >KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.1e-09 Score=89.62 Aligned_cols=103 Identities=24% Similarity=0.344 Sum_probs=91.7
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHH-hcCCC-CHHHHHHHH
Q 010013 409 SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALK-KYNMG-DAKTIKEII 486 (520)
Q Consensus 409 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~-~~~~~-~~~~~~~~~ 486 (520)
.+++..|+.+|.+++|.|+++|+..++...+-....+++..+..-+|+++.|+|++++|...+. .++.. +.+++..+|
T Consensus 33 q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~dt~eEi~~af 112 (172)
T KOG0028|consen 33 QEIKEAFELFDPDMAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGERDTKEEIKKAF 112 (172)
T ss_pred hhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhccCcHHHHHHHH
Confidence 5689999999999999999999977777666667788999999999999999999999999875 46666 889999999
Q ss_pred HHhcCCCCcceeHHHHHHHHHcCCC
Q 010013 487 AEVDIDNDGRINYEEFAAMMRKGNP 511 (520)
Q Consensus 487 ~~~d~~~dg~i~~~ef~~~l~~~~~ 511 (520)
+.+|.|++|+|+..+|..++.+-.+
T Consensus 113 rl~D~D~~Gkis~~~lkrvakeLge 137 (172)
T KOG0028|consen 113 RLFDDDKTGKISQRNLKRVAKELGE 137 (172)
T ss_pred HcccccCCCCcCHHHHHHHHHHhCc
Confidence 9999999999999999999987444
|
|
| >cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z | Back alignment and domain information |
|---|
Probab=99.04 E-value=8.2e-10 Score=85.91 Aligned_cols=64 Identities=19% Similarity=0.493 Sum_probs=55.4
Q ss_pred HHHHHHHhhhc-CCCCC-ceeHHHHHHHHHh-c----CCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 445 EHLYKAFEYFD-KDNSG-YITMEELEHALKK-Y----NMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 445 ~~~~~~F~~~D-~d~dG-~I~~~El~~~l~~-~----~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..+..+|..|| .|++| +|+.+||+.++.. + ... ++.+++++++.+|.|+||.|+|+||+.+|..
T Consensus 10 ~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~ 81 (93)
T cd05026 10 DTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAA 81 (93)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 46788899998 79998 5999999999976 2 222 6678999999999999999999999999864
|
S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac |
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.2e-09 Score=96.53 Aligned_cols=130 Identities=18% Similarity=0.180 Sum_probs=81.9
Q ss_pred EEEEEEEcCCCcEEEEEEeccccc-----------------------CCcccHHHHHHHHHHHHhccCC-CCeeEEEEEE
Q 010013 82 VTYLVTHKDTKQQFACKSISSRKL-----------------------INRDDVEDVRREVQIMHHLTGH-RNIVELKGAY 137 (520)
Q Consensus 82 ~Vy~~~~~~~~~~~avK~~~~~~~-----------------------~~~~~~~~~~~e~~~l~~l~~h-p~iv~l~~~~ 137 (520)
.||.|...+ |..+|+|+...... .........++|.++|.++... -++++++++.
T Consensus 1 ~Vy~~~~~~-~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAIDPD-GEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEECT-TEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEECCC-CCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 388888754 67899998753210 0001134578899999999833 2567777553
Q ss_pred EeCCeEEEEEeccC--CCchHHHHHhcCCCCHHHHHHHHHHHHHHHHH-HHHcCCeeecCCCCcEEeecCCCCCCeeEee
Q 010013 138 EDRHSVNLIMDLCA--GGELFDRIIAKGHYSERAAANLCRQMVTVVHY-CHSMGVMHRDLKPENFLFSSSAEDSPLKATD 214 (520)
Q Consensus 138 ~~~~~~~lv~e~~~--g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~-LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~D 214 (520)
...|||||++ |..+.. +... .++......++.+++..+.. +|..||+|+||.+.|||+.. +.+.|+|
T Consensus 80 ----~~~ivME~I~~~G~~~~~-l~~~-~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~----~~~~iID 149 (188)
T PF01163_consen 80 ----RNVIVMEYIGEDGVPLPR-LKDV-DLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDD----GKVYIID 149 (188)
T ss_dssp ----TTEEEEE--EETTEEGGC-HHHC-GGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEET----TCEEE--
T ss_pred ----CCEEEEEecCCCccchhh-HHhc-cccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeec----ceEEEEe
Confidence 2369999998 655543 3322 12244566778888885555 68999999999999999962 2799999
Q ss_pred cccccccC
Q 010013 215 FGLSVFFK 222 (520)
Q Consensus 215 fg~a~~~~ 222 (520)
||.+....
T Consensus 150 f~qav~~~ 157 (188)
T PF01163_consen 150 FGQAVDSS 157 (188)
T ss_dssp GTTEEETT
T ss_pred cCcceecC
Confidence 99887654
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B | Back alignment and domain information |
|---|
Probab=99.00 E-value=8.1e-10 Score=84.59 Aligned_cols=69 Identities=25% Similarity=0.423 Sum_probs=62.5
Q ss_pred HHHHhhHHHHhcccC-CCCCC-cccHHHHhhhhhh-----cCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhc
Q 010013 369 EEEIMGLKEMFKSMD-TDNSG-TITFEELKAGLPK-----LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (520)
Q Consensus 369 ~~~~~~l~~~F~~~D-~~~~g-~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 437 (520)
+..+..+.++|+.|| .|++| +|+.+||+.+|.. ++...++++++++++.+|.|++|.|+|+||+.++..
T Consensus 4 e~~~~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~ 79 (88)
T cd05027 4 EKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAM 79 (88)
T ss_pred HHHHHHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 345678999999998 79999 5999999999999 888889999999999999999999999999987653
|
S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i |
| >KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.98 E-value=7.5e-09 Score=97.94 Aligned_cols=133 Identities=23% Similarity=0.389 Sum_probs=103.4
Q ss_pred hhHHHHhcccCCCCCCcccHHHHhhhhhh-cCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccch-----------
Q 010013 373 MGLKEMFKSMDTDNSGTITFEELKAGLPK-LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNR----------- 440 (520)
Q Consensus 373 ~~l~~~F~~~D~~~~g~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~----------- 440 (520)
.+|++.|+.+|..+.|+|+...+...+.. +|.+++-.-+.-- ....+.+|.+.|.+.+..+.....
T Consensus 464 sdL~~eF~~~D~~ksG~lsis~Wa~~mE~i~~L~LPWr~L~~k--la~~s~d~~v~Y~~~~~~l~~e~~~~ea~~slvet 541 (631)
T KOG0377|consen 464 SDLEDEFRKYDPKKSGKLSISHWAKCMENITGLNLPWRLLRPK--LANGSDDGKVEYKSTLDNLDTEVILEEAGSSLVET 541 (631)
T ss_pred hHHHHHHHhcChhhcCeeeHHHHHHHHHHHhcCCCcHHHhhhh--ccCCCcCcceehHhHHHHhhhhhHHHHHHhHHHHH
Confidence 46889999999999999999999998877 4566655333222 234566789999988765432100
Q ss_pred -hhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCC----C-CHHHHHHHHHHhcCCCCcceeHHHHHHHHH
Q 010013 441 -VEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNM----G-DAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507 (520)
Q Consensus 441 -~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~----~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~ 507 (520)
-.....+..+|+.+|.|++|.||.+||+.+.+-++. . +++++-++-+.+|.|+||.|+++||++...
T Consensus 542 LYr~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFr 614 (631)
T KOG0377|consen 542 LYRNKSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAFR 614 (631)
T ss_pred HHhchhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHh
Confidence 012345889999999999999999999988876542 2 778899999999999999999999999765
|
|
| >cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6 | Back alignment and domain information |
|---|
Probab=98.98 E-value=2.2e-09 Score=82.17 Aligned_cols=64 Identities=16% Similarity=0.405 Sum_probs=57.4
Q ss_pred HHHHHHHhhhcC-CC-CCceeHHHHHHHHHh---cCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 445 EHLYKAFEYFDK-DN-SGYITMEELEHALKK---YNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 445 ~~~~~~F~~~D~-d~-dG~I~~~El~~~l~~---~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..+-.+|..||. |+ +|+|+.+||+.++.. +|.. +++++.++|+.+|.|++|.|+|+||+.+|..
T Consensus 10 ~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~ 79 (88)
T cd05029 10 GLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGA 79 (88)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence 457789999998 77 899999999999973 6776 8899999999999999999999999998864
|
S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact |
| >cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10 | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.6e-09 Score=83.61 Aligned_cols=65 Identities=25% Similarity=0.524 Sum_probs=57.5
Q ss_pred HHHHHHHHhhhcC-CC-CCceeHHHHHHHHHh-----cCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 444 EEHLYKAFEYFDK-DN-SGYITMEELEHALKK-----YNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 444 ~~~~~~~F~~~D~-d~-dG~I~~~El~~~l~~-----~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
...+..+|+.||. |+ +|+|+.+||+.++.. +|.. ++++++.++..+|.|++|.|+|+||+.++..
T Consensus 7 ~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~ 79 (94)
T cd05031 7 MESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAG 79 (94)
T ss_pred HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 4568899999997 97 699999999999986 3445 7789999999999999999999999998875
|
S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions. |
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.3e-08 Score=92.47 Aligned_cols=111 Identities=21% Similarity=0.238 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHHhccC-CCCeeEEEEEEEeC----CeEEEEEeccCCC-chHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 010013 111 VEDVRREVQIMHHLTG-HRNIVELKGAYEDR----HSVNLIMDLCAGG-ELFDRIIAKGHYSERAAANLCRQMVTVVHYC 184 (520)
Q Consensus 111 ~~~~~~e~~~l~~l~~-hp~iv~l~~~~~~~----~~~~lv~e~~~g~-~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~L 184 (520)
.....+|...+..|.. .=.+++++++.+.. ...++|+|+++|. +|.+.+.....++......++.+++..+.-|
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~l 134 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKL 134 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHH
Confidence 3567788888888862 12345566665542 2458999999884 7888887755577788889999999999999
Q ss_pred HHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 185 HSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 185 H~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
|+.||+|+|+++.|||+..++....+.|+||+.++..
T Consensus 135 H~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 135 HDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 9999999999999999976555567999999987753
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.96 E-value=7.4e-09 Score=94.00 Aligned_cols=140 Identities=17% Similarity=0.231 Sum_probs=103.1
Q ss_pred eeecceeeccCCeEEEEEEEcCCCcEEEEEEecccc--c---------------CC--cccHHHHHHHHHHHHhccCC-C
Q 010013 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRK--L---------------IN--RDDVEDVRREVQIMHHLTGH-R 128 (520)
Q Consensus 69 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~--~---------------~~--~~~~~~~~~e~~~l~~l~~h-p 128 (520)
+.++..||-|--|.||.|... .|..+|+|.-..-. + .. -......++|.++|.+|.++ -
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 567889999999999999986 47889999753110 0 00 01134567899999999743 3
Q ss_pred CeeEEEEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCC
Q 010013 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDS 208 (520)
Q Consensus 129 ~iv~l~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~ 208 (520)
.+++.+++ +.-.+|||+++|..|... ++..+.+..++..|+.-+..+-..||||+|+++-||+++ +++
T Consensus 172 ~VP~P~~~----nRHaVvMe~ieG~eL~~~-----r~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~---~dg 239 (304)
T COG0478 172 KVPKPIAW----NRHAVVMEYIEGVELYRL-----RLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVT---EDG 239 (304)
T ss_pred CCCCcccc----ccceeeeehcccceeecc-----cCcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEe---cCC
Confidence 67777754 566799999999766442 224556667777777777777799999999999999994 566
Q ss_pred CeeEeeccccccc
Q 010013 209 PLKATDFGLSVFF 221 (520)
Q Consensus 209 ~~kl~Dfg~a~~~ 221 (520)
.+.++||--+...
T Consensus 240 ~~~vIDwPQ~v~~ 252 (304)
T COG0478 240 DIVVIDWPQAVPI 252 (304)
T ss_pred CEEEEeCcccccC
Confidence 7999999766543
|
|
| >cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1 | Back alignment and domain information |
|---|
Probab=98.94 E-value=4.3e-09 Score=82.07 Aligned_cols=66 Identities=26% Similarity=0.535 Sum_probs=57.7
Q ss_pred hHHHHHHHHhhhc-CCCCCc-eeHHHHHHHHHh-cCC----C-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 443 REEHLYKAFEYFD-KDNSGY-ITMEELEHALKK-YNM----G-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 443 ~~~~~~~~F~~~D-~d~dG~-I~~~El~~~l~~-~~~----~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..+.++.+|+.|| .|++|+ |+.+||+.+|+. +|. . ++++++++|..+|.|++|.|+|+||+.++..
T Consensus 7 ~~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~ 80 (92)
T cd05025 7 AMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA 80 (92)
T ss_pred HHHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 3467999999997 999994 999999999975 442 3 6788999999999999999999999998875
|
S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins. |
| >cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction | Back alignment and domain information |
|---|
Probab=98.93 E-value=3.5e-09 Score=77.39 Aligned_cols=60 Identities=30% Similarity=0.444 Sum_probs=54.8
Q ss_pred HHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 448 YKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 448 ~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
+.+|+.+|+|++|.|+.+|++.++...|. +.+++.++|..+|.+++|.|+|+||+.++..
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g~-~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~ 61 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSGL-PRSVLAQIWDLADTDKDGKLDKEEFAIAMHL 61 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcCC-CHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 56899999999999999999999998876 6778999999999999999999999998753
|
The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs. |
| >smart00027 EH Eps15 homology domain | Back alignment and domain information |
|---|
Probab=98.89 E-value=3.3e-09 Score=83.42 Aligned_cols=70 Identities=30% Similarity=0.453 Sum_probs=63.6
Q ss_pred hhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhc
Q 010013 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (520)
Q Consensus 366 ~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 437 (520)
.++.+++.++.++|..+|.|++|.|+.+||..++...+ .+.++++.++..+|.+++|.|+|+||+.++..
T Consensus 3 ~ls~~~~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~--~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~ 72 (96)
T smart00027 3 AISPEDKAKYEQIFRSLDKNQDGTVTGAQAKPILLKSG--LPQTLLAKIWNLADIDNDGELDKDEFALAMHL 72 (96)
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 46778999999999999999999999999999998865 67889999999999999999999999987653
|
Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences. |
| >cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11 | Back alignment and domain information |
|---|
Probab=98.88 E-value=7.9e-09 Score=79.25 Aligned_cols=65 Identities=18% Similarity=0.411 Sum_probs=55.8
Q ss_pred HHHHHHHHhh-hcCCCCC-ceeHHHHHHHHHhc-----CCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 444 EEHLYKAFEY-FDKDNSG-YITMEELEHALKKY-----NMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 444 ~~~~~~~F~~-~D~d~dG-~I~~~El~~~l~~~-----~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
-..+..+|+. +|.|++| +|+.+||+.++... +.. ++.+++++++.+|.|+||.|+|+||+.+|..
T Consensus 8 i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~ 80 (89)
T cd05023 8 IESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGG 80 (89)
T ss_pred HHHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence 3568889999 6788986 99999999999875 222 6688999999999999999999999998864
|
S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S |
| >KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.88 E-value=8.9e-09 Score=89.94 Aligned_cols=98 Identities=29% Similarity=0.414 Sum_probs=81.9
Q ss_pred HHHhcccCCCCCCc-ccHHHHhhhhhhcCCCCCHH-HHHHHHHHhcCCCCCceehhhhHHHhhccch-------hhhHHH
Q 010013 376 KEMFKSMDTDNSGT-ITFEELKAGLPKLGTRLSES-EVRQLMEAADVDGNGTIDYIEFITATMHMNR-------VEREEH 446 (520)
Q Consensus 376 ~~~F~~~D~~~~g~-i~~~e~~~~l~~~~~~~~~~-~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~-------~~~~~~ 446 (520)
.+++..+|.+++|. |+.++|...+..+....... .++-.|+.+|.+++|.|+.+|+..++..+.. ......
T Consensus 69 ~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i 148 (187)
T KOG0034|consen 69 DRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKASKREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDI 148 (187)
T ss_pred HHHHHHHhccCCCCccCHHHHHHHHhhhcCCccHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHH
Confidence 47788889998888 99999999998876555554 7999999999999999999999987664322 233456
Q ss_pred HHHHHhhhcCCCCCceeHHHHHHHHHh
Q 010013 447 LYKAFEYFDKDNSGYITMEELEHALKK 473 (520)
Q Consensus 447 ~~~~F~~~D~d~dG~I~~~El~~~l~~ 473 (520)
+..+|..+|.|+||+|+.+||.+++..
T Consensus 149 ~d~t~~e~D~d~DG~IsfeEf~~~v~~ 175 (187)
T KOG0034|consen 149 VDKTFEEADTDGDGKISFEEFCKVVEK 175 (187)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHc
Confidence 778999999999999999999998864
|
|
| >smart00027 EH Eps15 homology domain | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.3e-08 Score=79.95 Aligned_cols=65 Identities=28% Similarity=0.413 Sum_probs=58.7
Q ss_pred hHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 443 REEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 443 ~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
....++.+|+.+|.|++|.|+.+||+.+++..+. ++++++++|..+|.+++|.|+|+||+.++..
T Consensus 8 ~~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~~-~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~ 72 (96)
T smart00027 8 DKAKYEQIFRSLDKNQDGTVTGAQAKPILLKSGL-PQTLLAKIWNLADIDNDGELDKDEFALAMHL 72 (96)
T ss_pred HHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcCC-CHHHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 3457889999999999999999999999998764 6678999999999999999999999998864
|
Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences. |
| >cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6 | Back alignment and domain information |
|---|
Probab=98.86 E-value=5.5e-09 Score=79.98 Aligned_cols=69 Identities=23% Similarity=0.431 Sum_probs=61.4
Q ss_pred HHHHhhHHHHhcccCC-CC-CCcccHHHHhhhhh---hcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhc
Q 010013 369 EEEIMGLKEMFKSMDT-DN-SGTITFEELKAGLP---KLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (520)
Q Consensus 369 ~~~~~~l~~~F~~~D~-~~-~g~i~~~e~~~~l~---~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 437 (520)
++.+..|-.+|+.+|. ++ +|+|+.+||+.++. .+|...+.+++.++++.+|.|++|.|+|+||+.++..
T Consensus 6 e~~~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~ 79 (88)
T cd05029 6 DQAIGLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGA 79 (88)
T ss_pred HHHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence 4566778899999998 67 89999999999996 3688899999999999999999999999999987754
|
S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact |
| >cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z | Back alignment and domain information |
|---|
Probab=98.85 E-value=5.1e-09 Score=81.42 Aligned_cols=70 Identities=20% Similarity=0.354 Sum_probs=59.1
Q ss_pred HHHHhhHHHHhcccC-CCCCC-cccHHHHhhhhhh-c----CCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc
Q 010013 369 EEEIMGLKEMFKSMD-TDNSG-TITFEELKAGLPK-L----GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (520)
Q Consensus 369 ~~~~~~l~~~F~~~D-~~~~g-~i~~~e~~~~l~~-~----~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 438 (520)
+..+..+.++|+.|| .|++| +|+.+||+.++.. + ....+..+++.++..+|.|++|.|+|+||+.++..+
T Consensus 6 e~a~~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l 82 (93)
T cd05026 6 EGAMDTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (93)
T ss_pred HHHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 345677889999999 78998 5999999999976 2 334577899999999999999999999999887643
|
S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac |
| >cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10 | Back alignment and domain information |
|---|
Probab=98.84 E-value=6.6e-09 Score=81.33 Aligned_cols=68 Identities=22% Similarity=0.372 Sum_probs=59.6
Q ss_pred HHhhHHHHhcccCC-CC-CCcccHHHHhhhhhh-----cCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc
Q 010013 371 EIMGLKEMFKSMDT-DN-SGTITFEELKAGLPK-----LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (520)
Q Consensus 371 ~~~~l~~~F~~~D~-~~-~g~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 438 (520)
....+.++|+.||. |+ +|+|+.+||..++.. ++..++.++++.++..+|.+++|.|+|+||+.++...
T Consensus 6 ~~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~ 80 (94)
T cd05031 6 AMESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGL 80 (94)
T ss_pred HHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 45678999999997 97 699999999999986 4667889999999999999999999999999877543
|
S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions. |
| >PRK09902 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=8.6e-08 Score=85.22 Aligned_cols=142 Identities=13% Similarity=0.106 Sum_probs=101.9
Q ss_pred eeccCCeEEEEEEEcCCCcEEEEEEeccc---ccCCcccHHHHHHHHHHHHhccCC-CCeeEEEEEEE-e----CCeEEE
Q 010013 75 LGRGQFGVTYLVTHKDTKQQFACKSISSR---KLINRDDVEDVRREVQIMHHLTGH-RNIVELKGAYE-D----RHSVNL 145 (520)
Q Consensus 75 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~---~~~~~~~~~~~~~e~~~l~~l~~h-p~iv~l~~~~~-~----~~~~~l 145 (520)
-|+||.+-|++....+ +.+-+|.-... .+..+.....+.+|...+.+|... -.++++. ++. . ...-+|
T Consensus 26 ~~rgG~SgV~r~~~~g--~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~L 102 (216)
T PRK09902 26 YRRNGMSGVQCVERNG--KKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALL 102 (216)
T ss_pred cCCCCcceEEEEEeCC--cEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEE
Confidence 4678999999987643 46788876411 111144567899999999999721 1244444 332 1 223678
Q ss_pred EEeccCC-CchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccc
Q 010013 146 IMDLCAG-GELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (520)
Q Consensus 146 v~e~~~g-~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 220 (520)
|+|-+.| .+|.+++.+. .+.+......++.+++.++.-||+.|+.|+|+.+.||++..++ ...++++||.-++.
T Consensus 103 VTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g-~~~v~lIDlEk~r~ 179 (216)
T PRK09902 103 VTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEG-KAEAGFLDLEKSRR 179 (216)
T ss_pred EEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCC-CeeEEEEEhhccch
Confidence 9998765 5787777553 3457777889999999999999999999999999999996432 34599999987765
|
|
| >cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP) | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.2e-08 Score=81.89 Aligned_cols=63 Identities=22% Similarity=0.340 Sum_probs=54.5
Q ss_pred hHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 443 REEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 443 ~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
-...+..+|..+|.|+||+|+.+||..+. + ...+..+..+|..+|.|+||.||++||..++..
T Consensus 46 ~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~--l-~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl~~ 108 (116)
T cd00252 46 CKDPVGWMFNQLDGNYDGKLSHHELAPIR--L-DPNEHCIKPFFESCDLDKDGSISLDEWCYCFIK 108 (116)
T ss_pred HHHHHHHHHHHHCCCCCCcCCHHHHHHHH--c-cchHHHHHHHHHHHCCCCCCCCCHHHHHHHHhC
Confidence 35678999999999999999999999876 2 224567889999999999999999999999943
|
SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules. |
| >cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1 | Back alignment and domain information |
|---|
Probab=98.82 E-value=8.3e-09 Score=80.42 Aligned_cols=69 Identities=22% Similarity=0.420 Sum_probs=59.2
Q ss_pred HHHhhHHHHhcccC-CCCCCc-ccHHHHhhhhhh-cC----CCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc
Q 010013 370 EEIMGLKEMFKSMD-TDNSGT-ITFEELKAGLPK-LG----TRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (520)
Q Consensus 370 ~~~~~l~~~F~~~D-~~~~g~-i~~~e~~~~l~~-~~----~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 438 (520)
..+..+.++|+.|| .+++|+ |+..||..+|.. +| ..++.++++.+|..+|.|++|.|+|+||+.++...
T Consensus 6 ~~~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~ 81 (92)
T cd05025 6 TAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL 81 (92)
T ss_pred HHHHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 44567999999997 999995 999999999975 44 35688999999999999999999999999877543
|
S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins. |
| >cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.4e-08 Score=78.49 Aligned_cols=66 Identities=20% Similarity=0.497 Sum_probs=57.7
Q ss_pred hHHHHHHHHhhhcC--CCCCceeHHHHHHHHHh-cCCC-----CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 443 REEHLYKAFEYFDK--DNSGYITMEELEHALKK-YNMG-----DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 443 ~~~~~~~~F~~~D~--d~dG~I~~~El~~~l~~-~~~~-----~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..+.++.+|..||+ |++|.|+.+||..+++. +|.. +.++++.++..+|.+++|.|+|+||+.++..
T Consensus 6 ~~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~ 79 (88)
T cd00213 6 AIETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGK 79 (88)
T ss_pred HHHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHH
Confidence 34568899999999 89999999999999976 4432 4788999999999999999999999998875
|
Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th |
| >PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A | Back alignment and domain information |
|---|
Probab=98.80 E-value=2.2e-08 Score=69.46 Aligned_cols=51 Identities=35% Similarity=0.653 Sum_probs=45.7
Q ss_pred CCCceeHHHHHHHHHhcCCC--CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 458 NSGYITMEELEHALKKYNMG--DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 458 ~dG~I~~~El~~~l~~~~~~--~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
++|.|+.+||+.++..+|.. +++++..+|..+|.|++|.|+|+||+.+++.
T Consensus 1 ~~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 1 KDGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SSSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence 47999999999999887755 7888999999999999999999999999864
|
... |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 520 | ||||
| 3i79_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 2e-84 | ||
| 3ku2_A | 507 | Crystal Structure Of Inactivated Form Of Cdpk1 From | 3e-84 | ||
| 3hx4_A | 508 | Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg | 3e-84 | ||
| 3i7c_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 7e-81 | ||
| 3lij_A | 494 | Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) | 8e-81 | ||
| 3hzt_A | 467 | Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4 | 1e-80 | ||
| 3igo_A | 486 | Crystal Structure Of Cryptosporidium Parvum Cdpk1, | 2e-80 | ||
| 3q5i_A | 504 | Crystal Structure Of Pbanka_031420 Length = 504 | 1e-72 | ||
| 1a06_A | 332 | Calmodulin-Dependent Protein Kinase From Rat Length | 1e-59 | ||
| 4fg9_A | 320 | Crystal Structure Of Human Calcium/calmodulin-depen | 2e-59 | ||
| 4fg8_A | 315 | Crystal Structure Of Human Calcium/calmodulin-depen | 2e-59 | ||
| 2qg5_A | 294 | Cryptosporidium Parvum Calcium Dependent Protein Ki | 7e-59 | ||
| 3f3z_A | 277 | Crystal Structure Of Cryptosporidium Parvum Calcium | 7e-59 | ||
| 2jc6_A | 334 | Crystal Structure Of Human Calmodulin-Dependent Pro | 8e-59 | ||
| 3ma6_A | 298 | Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr | 1e-58 | ||
| 4fg7_A | 293 | Crystal Structure Of Human Calcium/calmodulin-depen | 3e-58 | ||
| 2w4o_A | 349 | Crystal Structure Of Human Camk4 In Complex With 4- | 3e-57 | ||
| 2wei_A | 287 | Crystal Structure Of The Kinase Domain Of Cryptospo | 2e-56 | ||
| 3dfa_A | 286 | Crystal Structure Of Kinase Domain Of Calcium-depen | 2e-56 | ||
| 3dxn_A | 287 | Crystal Structure Of The Calcium-dependent Kinase F | 1e-55 | ||
| 2jam_A | 304 | Crystal Structure Of Human Calmodulin-Dependent Pro | 3e-55 | ||
| 2vz6_A | 313 | Structure Of Human Calcium Calmodulin Dependent Pro | 2e-54 | ||
| 2wel_A | 327 | Crystal Structure Of Su6656-Bound CalciumCALMODULIN | 3e-54 | ||
| 2bdw_A | 362 | Crystal Structure Of The Auto-Inhibited Kinase Doma | 5e-54 | ||
| 3soa_A | 444 | Full-Length Human Camkii Length = 444 | 8e-54 | ||
| 2vn9_A | 301 | Crystal Structure Of Human Calcium Calmodulin Depen | 8e-54 | ||
| 3kl8_A | 269 | Camkiintide Inhibitor Complex Length = 269 | 8e-53 | ||
| 3kk9_A | 282 | Camkii Substrate Complex B Length = 282 | 9e-53 | ||
| 3kk8_A | 284 | Camkii Substrate Complex A Length = 284 | 9e-53 | ||
| 3bhh_A | 295 | Crystal Structure Of Human Calcium/calmodulin-depen | 2e-52 | ||
| 2w4k_A | 302 | X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | 5e-51 | ||
| 2v7o_A | 336 | Crystal Structure Of Human Calcium-Calmodulin-Depen | 1e-50 | ||
| 2aao_A | 166 | Regulatory Apparatus Of Calcium Dependent Protein K | 2e-50 | ||
| 2yak_A | 285 | Structure Of Death-Associated Protein Kinase 1 (Dap | 3e-50 | ||
| 2y0a_A | 326 | Structure Of Dapk1 Construct Residues 1-304 Length | 3e-50 | ||
| 1yrp_A | 278 | Catalytic Domain Of Human Zip Kinase Phosphorylated | 3e-50 | ||
| 1wvw_A | 278 | Crystal Structures Of Kinase Domain Of Dap Kinase I | 4e-50 | ||
| 2xuu_A | 334 | Crystal Structure Of A Dap-Kinase 1 Mutant Length = | 4e-50 | ||
| 2xzs_A | 312 | Death Associated Protein Kinase 1 Residues 1-312 Le | 4e-50 | ||
| 2x0g_A | 334 | X-ray Structure Of A Dap-kinase Calmodulin Complex | 4e-50 | ||
| 2w4j_A | 277 | X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | 4e-50 | ||
| 3mfr_A | 351 | Cask-4m Cam Kinase Domain, Native Length = 351 | 4e-50 | ||
| 3f5u_A | 295 | Crystal Structure Of The Death Associated Protein K | 5e-50 | ||
| 1ig1_A | 294 | 1.8a X-Ray Structure Of Ternary Complex Of A Cataly | 5e-50 | ||
| 1p4f_A | 293 | Death Associated Protein Kinase Catalytic Domain Wi | 5e-50 | ||
| 3dfc_B | 295 | Crystal Structure Of A Glycine-Rich Loop Mutant Of | 1e-49 | ||
| 3gu8_A | 295 | Crystal Structure Of Dapkl93g With N6-Cyclopentylad | 2e-49 | ||
| 3bhy_A | 283 | Crystal Structure Of Human Death Associated Protein | 3e-49 | ||
| 3gu4_A | 295 | Crystal Structure Of Dapkq23v-Amppnp Length = 295 | 4e-49 | ||
| 2j90_A | 304 | Crystal Structure Of Human Zip Kinase In Complex Wi | 5e-49 | ||
| 3tac_A | 361 | Crystal Structure Of The Liprin-AlphaCASK COMPLEX L | 7e-48 | ||
| 3c0g_A | 351 | Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len | 9e-48 | ||
| 1s6i_A | 188 | Ca2+-Regulatory Region (Cld) From Soybean Calcium-D | 1e-47 | ||
| 3is5_A | 285 | Crystal Structure Of Cdpk Kinase Domain From Toxopl | 2e-47 | ||
| 1zws_A | 288 | Crystal Structure Of The Catalytic Domain Of Human | 9e-47 | ||
| 1z9x_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 1e-46 | ||
| 2a27_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 1e-46 | ||
| 2y7j_A | 365 | Structure Of Human Phosphorylase Kinase, Gamma 2 Le | 1e-46 | ||
| 2a2a_A | 321 | High-resolution Crystallographic Analysis Of The Au | 1e-46 | ||
| 1wmk_A | 321 | Human Death-Associated Kinase Drp-1, Mutant S308d D | 1e-46 | ||
| 2ycr_A | 323 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 1e-46 | ||
| 2w0j_A | 323 | Crystal Structure Of Chk2 In Complex With Nsc 10955 | 2e-46 | ||
| 2xk9_A | 322 | Structural Analysis Of Checkpoint Kinase 2 (Chk2) I | 2e-46 | ||
| 2ycf_A | 322 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 2e-46 | ||
| 2ya9_A | 361 | Crystal Structure Of The Autoinhibited Form Of Mous | 2e-46 | ||
| 2cn5_A | 329 | Crystal Structure Of Human Chk2 In Complex With Adp | 2e-46 | ||
| 2phk_A | 277 | The Crystal Structure Of A Phosphorylase Kinase Pep | 7e-46 | ||
| 1phk_A | 298 | Two Structures Of The Catalytic Domain Of Phosphory | 1e-45 | ||
| 3i6w_A | 443 | Structure And Activation Mechanism Of The Chk2 Dna- | 1e-45 | ||
| 3kn5_A | 325 | Crystal Structure Of The C-Terminal Kinase Domain O | 1e-45 | ||
| 3i6u_A | 419 | Structure And Activation Mechanism Of The Chk2 Dna- | 1e-45 | ||
| 1ql6_A | 298 | The Catalytic Mechanism Of Phosphorylase Kinase Pro | 2e-45 | ||
| 2qr8_A | 342 | 2.0a X-ray Structure Of C-terminal Kinase Domain Of | 5e-44 | ||
| 3rny_A | 346 | Crystal Structure Of Human Rsk1 C-Terminal Kinase D | 3e-43 | ||
| 2wnt_A | 330 | Crystal Structure Of The Human Ribosomal Protein S6 | 3e-43 | ||
| 2qr7_A | 342 | 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of | 7e-43 | ||
| 1kob_A | 387 | Twitchin Kinase Fragment (Aplysia), Autoregulated P | 5e-41 | ||
| 3r1n_A | 317 | Mk3 Kinase Bound To Compound 5b Length = 317 | 1e-40 | ||
| 3fhr_A | 336 | High Resolution Crystal Structure Of Mitogen-Activa | 1e-40 | ||
| 2hw6_A | 307 | Crystal Structure Of Mnk1 Catalytic Domain Length = | 1e-40 | ||
| 2x4f_A | 373 | The Crystal Structure Of The Human Myosin Light Cha | 3e-39 | ||
| 3ka0_A | 320 | Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4 | 4e-39 | ||
| 2onl_C | 406 | Crystal Structure Of The P38a-Mapkap Kinase 2 Heter | 5e-39 | ||
| 1kwp_A | 400 | Crystal Structure Of Mapkap2 Length = 400 | 5e-39 | ||
| 2oza_A | 356 | Structure Of P38alpha Complex Length = 356 | 6e-39 | ||
| 3r2b_A | 318 | Mk2 Kinase Bound To Compound 5b Length = 318 | 7e-39 | ||
| 3fpm_A | 325 | Crystal Structure Of A Squarate Inhibitor Bound To | 8e-39 | ||
| 3r2y_A | 319 | Mk2 Kinase Bound To Compound 1 Length = 319 | 8e-39 | ||
| 2pzy_A | 324 | Structure Of Mk2 Complexed With Compound 76 Length | 8e-39 | ||
| 2p3g_X | 327 | Crystal Structure Of A Pyrrolopyridine Inhibitor Bo | 8e-39 | ||
| 3gok_A | 334 | Binding Site Mapping Of Protein Ligands Length = 33 | 9e-39 | ||
| 2jbo_A | 326 | Protein Kinase Mk2 In Complex With An Inhibitor (Cr | 9e-39 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 1e-38 | ||
| 1tki_A | 321 | Autoinhibited Serine Kinase Domain Of The Giant Mus | 2e-38 | ||
| 1koa_A | 491 | Twitchin Kinase Fragment (C.Elegans), Autoregulated | 2e-38 | ||
| 3uto_A | 573 | Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin- | 2e-38 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 3e-38 | ||
| 1zmu_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 3e-38 | ||
| 3hko_A | 345 | Crystal Structure Of A Cdpk Kinase Domain From Cryp | 3e-38 | ||
| 2wzj_A | 327 | Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82 | 3e-38 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 3e-38 | ||
| 2r0i_A | 327 | Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len | 3e-38 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 3e-38 | ||
| 2y94_A | 476 | Structure Of An Active Form Of Mammalian Ampk Lengt | 4e-38 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 4e-38 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 4e-38 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 6e-38 | ||
| 1zmv_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 6e-38 | ||
| 2c6d_A | 275 | Aurora A Kinase Activated Mutant (T287d) In Complex | 6e-38 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 7e-38 | ||
| 2c6e_A | 283 | Aurora A Kinase Activated Mutant (T287d) In Complex | 7e-38 | ||
| 3iec_A | 319 | Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K | 7e-38 | ||
| 2bfx_B | 284 | Mechanism Of Aurora-B Activation By Incenp And Inhi | 9e-38 | ||
| 2vrx_A | 285 | Structure Of Aurora B Kinase In Complex With Zm4474 | 9e-38 | ||
| 1zmw_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 9e-38 | ||
| 3r21_A | 271 | Design, Synthesis, And Biological Evaluation Of Pyr | 1e-37 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 2e-37 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 2e-37 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 2e-37 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 3e-37 | ||
| 2yza_A | 276 | Crystal Structure Of Kinase Domain Of Human 5'-Amp- | 3e-37 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 3e-37 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 3e-37 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 3e-37 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 3e-37 | ||
| 1ol5_A | 282 | Structure Of Aurora-A 122-403, Phosphorylated On Th | 4e-37 | ||
| 1nxk_A | 400 | Crystal Structure Of Staurosporine Bound To Map Kap | 4e-37 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 4e-37 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 4e-37 | ||
| 3o50_A | 267 | Crystal Structure Of Benzamide 9 Bound To Auroraa L | 4e-37 | ||
| 3h4j_B | 336 | Crystal Structure Of Pombe Ampk Kdaid Fragment Leng | 4e-37 | ||
| 3ha6_A | 268 | Crystal Structure Of Aurora A In Complex With Tpx2 | 5e-37 | ||
| 3e5a_A | 268 | Crystal Structure Of Aurora A In Complex With Vx-68 | 5e-37 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 5e-37 | ||
| 2bfy_A | 284 | Complex Of Aurora-B With Incenp And Hesperidin. Len | 5e-37 | ||
| 2qnj_A | 328 | Kinase And Ubiquitin-Associated Domains Of Mark3PAR | 6e-37 | ||
| 3h0y_A | 268 | Aurora A In Complex With A Bisanilinopyrimidine Len | 6e-37 | ||
| 2w1d_A | 275 | Structure Determination Of Aurora Kinase In Complex | 7e-37 | ||
| 2w1c_A | 275 | Structure Determination Of Aurora Kinase In Complex | 8e-37 | ||
| 2xne_A | 272 | Structure Of Aurora-A Bound To An Imidazopyrazine I | 8e-37 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 1e-36 | ||
| 1ol6_A | 282 | Structure Of Unphosphorylated D274n Mutant Of Auror | 1e-36 | ||
| 2ac5_A | 316 | Structure Of Human Mnk2 Kinase Domain Mutant D228g | 1e-36 | ||
| 2h6d_A | 276 | Protein Kinase Domain Of The Human 5'-Amp-Activated | 2e-36 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 2e-36 | ||
| 3fe3_A | 328 | Crystal Structure Of The Kinase Mark3PAR-1: T211a-S | 2e-36 | ||
| 3lm0_A | 327 | Crystal Structure Of Human SerineTHREONINE KINASE 1 | 3e-36 | ||
| 3ujg_A | 361 | Crystal Structure Of Snrk2.6 In Complex With Hab1 L | 6e-36 | ||
| 2ac3_A | 316 | Structure Of Human Mnk2 Kinase Domain Length = 316 | 7e-36 | ||
| 3zuu_A | 362 | The Structure Of Ost1 (D160a, S175d) Kinase In Comp | 7e-36 | ||
| 3dae_A | 283 | Crystal Structure Of Phosphorylated Snf1 Kinase Dom | 1e-35 | ||
| 3mn3_A | 271 | An Inhibited Conformation For The Protein Kinase Do | 1e-35 | ||
| 3hyh_A | 275 | Crystal Structure Of The Protein Kinase Domain Of Y | 1e-35 | ||
| 2fh9_A | 274 | Structure And Dimerization Of The Kinase Domain Fro | 2e-35 | ||
| 2hak_A | 328 | Catalytic And Ubiqutin-Associated Domains Of Mark1P | 2e-35 | ||
| 3zut_A | 362 | The Structure Of Ost1 (D160a) Kinase Length = 362 | 3e-35 | ||
| 3uc4_A | 362 | The Crystal Structure Of Snf1-Related Kinase 2.6 Le | 4e-35 | ||
| 1y8g_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 6e-35 | ||
| 3uc3_A | 361 | The Crystal Structure Of Snf1-Related Kinase 2.3 Le | 7e-35 | ||
| 3udb_A | 317 | Crystal Structure Of Snrk2.6 Length = 317 | 1e-34 | ||
| 4af3_A | 292 | Human Aurora B Kinase In Complex With Incenp And Vx | 5e-34 | ||
| 3kga_A | 299 | Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe | 5e-34 | ||
| 3cok_A | 278 | Crystal Structure Of Plk4 Kinase Length = 278 | 6e-34 | ||
| 2gu8_A | 337 | Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel | 7e-33 | ||
| 1cdk_A | 350 | Camp-Dependent Protein Kinase Catalytic Subunit (E. | 9e-33 | ||
| 1ctp_E | 350 | Structure Of The Mammalian Catalytic Subunit Of Cam | 9e-33 | ||
| 1cmk_E | 350 | Crystal Structures Of The Myristylated Catalytic Su | 9e-33 | ||
| 3fhi_A | 350 | Crystal Structure Of A Complex Between The Catalyti | 1e-32 | ||
| 1syk_A | 350 | Crystal Structure Of E230q Mutant Of Camp-Dependent | 1e-32 | ||
| 4dfy_A | 371 | Crystal Structure Of R194a Mutant Of Camp-Dependent | 1e-32 | ||
| 2qur_A | 350 | Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe | 1e-32 | ||
| 2erz_E | 351 | Crystal Structure Of C-amp Dependent Kinase (pka) B | 1e-32 | ||
| 1j3h_A | 350 | Crystal Structure Of Apoenzyme Camp-Dependent Prote | 1e-32 | ||
| 3nx8_A | 351 | Human Camp Dependent Protein Kinase In Complex With | 1e-32 | ||
| 1fmo_E | 350 | Crystal Structure Of A Polyhistidine-Tagged Recombi | 1e-32 | ||
| 1bkx_A | 350 | A Binary Complex Of The Catalytic Subunit Of Camp-D | 2e-32 | ||
| 3l9m_A | 351 | Crystal Structure Of Pkab3 (Pka Triple Mutant V123a | 2e-32 | ||
| 1jbp_E | 350 | Crystal Structure Of The Catalytic Subunit Of Camp- | 2e-32 | ||
| 1xh9_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 2e-32 | ||
| 3agl_A | 351 | Complex Of Pka With The Bisubstrate Protein Kinase | 2e-32 | ||
| 3mvj_A | 371 | Human Cyclic Amp-Dependent Protein Kinase Pka Inhib | 2e-32 | ||
| 3agm_A | 351 | Complex Of Pka With The Bisubstrate Protein Kinase | 2e-32 | ||
| 4ae6_A | 343 | Structure And Function Of The Human Sperm-specific | 2e-32 | ||
| 1apm_E | 350 | 2.0 Angstrom Refined Crystal Structure Of The Catal | 3e-32 | ||
| 2xck_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 3e-32 | ||
| 1ydt_E | 350 | Structure Of Camp-Dependent Protein Kinase, Alpha-C | 3e-32 | ||
| 1smh_A | 350 | Protein Kinase A Variant Complex With Completely Or | 5e-32 | ||
| 3pvb_A | 345 | Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca | 5e-32 | ||
| 4dg3_E | 371 | Crystal Structure Of R336a Mutant Of Camp-dependent | 5e-32 | ||
| 1l3r_E | 350 | Crystal Structure Of A Transition State Mimic Of Th | 5e-32 | ||
| 2qcs_A | 350 | A Complex Structure Between The Catalytic And Regul | 5e-32 | ||
| 3o7l_B | 350 | Crystal Structure Of Phospholamban (1-19):pka C-Sub | 6e-32 | ||
| 4dfx_E | 350 | Crystal Structure Of Myristoylated K7c Catalytic Su | 6e-32 | ||
| 3ama_A | 351 | Protein Kinase A Sixfold Mutant Model Of Aurora B W | 6e-32 | ||
| 3qam_E | 350 | Crystal Structure Of Glu208ala Mutant Of Catalytic | 7e-32 | ||
| 1q61_A | 350 | Pka Triple Mutant Model Of Pkb Length = 350 | 7e-32 | ||
| 4ae9_A | 343 | Structure And Function Of The Human Sperm-specific | 8e-32 | ||
| 3qal_E | 350 | Crystal Structure Of Arg280ala Mutant Of Catalytic | 9e-32 | ||
| 2uzt_A | 336 | Pka Structures Of Akt, Indazole-Pyridine Inhibitors | 1e-31 | ||
| 1stc_E | 350 | Camp-Dependent Protein Kinase, Alpha-Catalytic Subu | 1e-31 | ||
| 1svh_A | 350 | Crystal Structure Of Protein Kinase A In Complex Wi | 1e-31 | ||
| 2c1a_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 1e-31 | ||
| 3dnd_A | 350 | Camp-Dependent Protein Kinase Pka Catalytic Subunit | 1e-31 | ||
| 2r7b_A | 312 | Crystal Structure Of The Phosphoinositide-Dependent | 1e-31 | ||
| 3nus_A | 286 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra | 1e-31 | ||
| 2f7e_E | 351 | Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu | 1e-31 | ||
| 1h1w_A | 289 | High Resolution Crystal Structure Of The Human Pdk1 | 1e-31 | ||
| 3iop_A | 312 | Pdk-1 In Complex With The Inhibitor Compound-8i Len | 1e-31 | ||
| 1uu9_A | 286 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 1e-31 | ||
| 2biy_A | 310 | Structure Of Pdk1-S241a Mutant Kinase Domain Length | 1e-31 | ||
| 3nax_A | 311 | Pdk1 In Complex With Inhibitor Mp7 Length = 311 | 1e-31 | ||
| 2xch_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 1e-31 | ||
| 1uu3_A | 310 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 1e-31 | ||
| 3sc1_A | 311 | Novel Isoquinolone Pdk1 Inhibitors Discovered Throu | 1e-31 | ||
| 3orx_A | 316 | Pdk1 Mutant Bound To Allosteric Disulfide Fragment | 1e-31 | ||
| 3rwp_A | 311 | Discovery Of A Novel, Potent And Selective Inhibito | 1e-31 | ||
| 3qc4_A | 314 | Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = | 1e-31 | ||
| 3h9o_A | 311 | Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) | 1e-31 | ||
| 1z5m_A | 286 | Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr | 1e-31 | ||
| 3nay_A | 311 | Pdk1 In Complex With Inhibitor Mp6 Length = 311 | 2e-31 | ||
| 1rdq_E | 350 | Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of | 2e-31 | ||
| 1q24_A | 350 | Pka Double Mutant Model Of Pkb In Complex With Mgat | 2e-31 | ||
| 3nun_A | 292 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea | 2e-31 | ||
| 2vo0_A | 351 | Structure Of Pka-Pkb Chimera Complexed With C-(4-(4 | 2e-31 | ||
| 2jdt_A | 351 | Structure Of Pka-Pkb Chimera Complexed With Isoquin | 2e-31 | ||
| 4a07_A | 311 | Human Pdk1 Kinase Domain In Complex With Allosteric | 2e-31 | ||
| 3hrc_A | 311 | Crystal Structure Of A Mutant Of Human Pdk1 Kinase | 2e-31 | ||
| 1szm_A | 350 | Dual Binding Mode Of Bisindolylmaleimide 2 To Prote | 2e-31 | ||
| 2jds_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 3e-31 | ||
| 1xh7_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 4e-31 | ||
| 1q8w_A | 350 | The Catalytic Subunit Of Camp-Dependent Protein Kin | 4e-31 | ||
| 2gnj_A | 350 | Pka Three Fold Mutant Model Of Rho-Kinase With Y-27 | 4e-31 | ||
| 3db6_A | 301 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 4e-31 | ||
| 3d5v_A | 317 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 4e-31 | ||
| 2uvy_A | 351 | Structure Of Pka-pkb Chimera Complexed With Methyl- | 7e-31 | ||
| 3pwy_A | 311 | Crystal Structure Of An Extender (Spd28345)-Modifie | 7e-31 | ||
| 1fot_A | 318 | Structure Of The Unliganded Camp-Dependent Protein | 1e-30 | ||
| 2gnf_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 1e-30 | ||
| 2gng_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 1e-30 | ||
| 2jdo_A | 342 | Structure Of Pkb-Beta (Akt2) Complexed With Isoquin | 1e-30 | ||
| 1gzk_A | 315 | Molecular Mechanism For The Regulation Of Protein K | 1e-30 | ||
| 1mrv_A | 339 | Crystal Structure Of An Inactive Akt2 Kinase Domain | 1e-30 | ||
| 1o6l_A | 337 | Crystal Structure Of An Activated Akt/protein Kinas | 1e-30 | ||
| 3e87_A | 335 | Crystal Structures Of The Kinase Domain Of Akt2 In | 2e-30 | ||
| 1o6k_A | 336 | Structure Of Activated Form Of Pkb Kinase Domain S4 | 2e-30 | ||
| 1gzn_A | 335 | Structure Of Pkb Kinase Domain Length = 335 | 2e-30 | ||
| 3d5u_A | 317 | Crystal Structure Of A Wildtype Polo-Like Kinase 1 | 3e-30 | ||
| 3d5w_A | 317 | Crystal Structure Of A Phosphorylated Polo-Like Kin | 3e-30 | ||
| 4fsy_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 1e-29 | ||
| 2f57_A | 317 | Crystal Structure Of The Human P21-activated Kinase | 1e-29 | ||
| 2ydj_A | 276 | Discovery Of Checkpoint Kinase Inhibitor Azd7762 By | 2e-29 | ||
| 4ejn_A | 446 | Crystal Structure Of Autoinhibited Form Of Akt1 In | 2e-29 | ||
| 4fsz_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 2e-29 | ||
| 3o96_A | 446 | Crystal Structure Of Human Akt1 With An Allosteric | 2e-29 | ||
| 2x8e_A | 276 | Discovery Of A Novel Class Of Triazolones As Checkp | 2e-29 | ||
| 2br1_A | 297 | Structure-Based Design Of Novel Chk1 Inhibitors: In | 2e-29 | ||
| 1ia8_A | 289 | The 1.7 A Crystal Structure Of Human Cell Cycle Che | 2e-29 | ||
| 1zlt_A | 295 | Crystal Structure Of Chk1 Complexed With A Hymenald | 2e-29 | ||
| 4fsn_A | 278 | Crystal Structure Of The Chk1 Length = 278 | 2e-29 | ||
| 4fsm_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 2e-29 | ||
| 3ot3_A | 273 | X-Ray Crystal Structure Of Compound 22k Bound To Hu | 3e-29 | ||
| 2ayp_A | 269 | Crystal Structure Of Chk1 With An Indol Inhibitor L | 3e-29 | ||
| 3jvr_A | 271 | Characterization Of The Chk1 Allosteric Inhibitor B | 3e-29 | ||
| 2ghg_A | 269 | H-Chk1 Complexed With A431994 Length = 269 | 3e-29 | ||
| 4fsw_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 3e-29 | ||
| 2r0u_A | 323 | Crystal Structure Of Chek1 In Complex With Inhibito | 3e-29 | ||
| 2hog_A | 322 | Crystal Structure Of Chek1 In Complex With Inhibito | 3e-29 | ||
| 1zys_A | 273 | Co-Crystal Structure Of Checkpoint Kinase Chk1 With | 3e-29 | ||
| 2e9v_A | 268 | Structure Of H-Chk1 Complexed With A859017 Length = | 3e-29 | ||
| 4ft3_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 4e-29 | ||
| 4fst_A | 269 | Crystal Structure Of The Chk1 Length = 269 | 4e-29 | ||
| 3a62_A | 327 | Crystal Structure Of Phosphorylated P70s6k1 Length | 4e-29 | ||
| 3a60_A | 327 | Crystal Structure Of Unphosphorylated P70s6k1 (Form | 4e-29 | ||
| 3cqu_A | 342 | Crystal Structure Of Akt-1 Complexed With Substrate | 7e-29 | ||
| 3ocb_A | 341 | Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor | 7e-29 | ||
| 4gv1_A | 340 | Pkb Alpha In Complex With Azd5363 Length = 340 | 8e-29 | ||
| 2c30_A | 321 | Crystal Structure Of The Human P21-Activated Kinase | 1e-28 | ||
| 4fsu_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 1e-28 | ||
| 2v5q_A | 315 | Crystal Structure Of Wild-type Plk-1 Kinase Domain | 5e-28 | ||
| 1vzo_A | 355 | The Structure Of The N-Terminal Kinase Domain Of Ms | 6e-28 | ||
| 2yac_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 6e-28 | ||
| 3kb7_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 6e-28 | ||
| 2ou7_A | 335 | Structure Of The Catalytic Domain Of Human Polo-Lik | 1e-27 | ||
| 3thb_A | 333 | Structure Of Plk1 Kinase Domain In Complex With A B | 1e-27 | ||
| 2rku_A | 294 | Structure Of Plk1 In Complex With Bi2536 Length = 2 | 1e-27 | ||
| 2r5t_A | 373 | Crystal Structure Of Inactive Serum And Glucocortic | 5e-27 | ||
| 4agu_A | 311 | Crystal Structure Of The Human Cdkl1 Kinase Domain | 5e-27 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 6e-27 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 7e-27 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 7e-27 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 7e-27 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 8e-27 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 8e-27 | ||
| 2zv2_A | 298 | Crystal Structure Of Human CalciumCALMODULIN-Depend | 2e-26 | ||
| 4fr4_A | 384 | Crystal Structure Of Human SerineTHREONINE-Protein | 2e-26 | ||
| 3zh8_A | 349 | A Novel Small Molecule Apkc Inhibitor Length = 349 | 2e-26 | ||
| 1zrz_A | 364 | Crystal Structure Of The Catalytic Domain Of Atypic | 2e-26 | ||
| 3a8w_A | 345 | Crystal Structure Of Pkciota Kinase Domain Length = | 2e-26 | ||
| 4dc2_A | 396 | Structure Of Pkc In Complex With A Substrate Peptid | 4e-26 | ||
| 3g51_A | 325 | Structural Diversity Of The Active Conformation Of | 5e-26 | ||
| 3ubd_A | 304 | Structure Of N-Terminal Domain Of Rsk2 Kinase In Co | 5e-26 | ||
| 4el9_A | 305 | Structure Of N-Terminal Kinase Domain Of Rsk2 With | 6e-26 | ||
| 2f2o_A | 179 | Structure Of Calmodulin Bound To A Calcineurin Pept | 6e-26 | ||
| 1xjd_A | 345 | Crystal Structure Of Pkc-Theta Complexed With Staur | 7e-26 | ||
| 3sg6_A | 450 | Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1) L | 8e-26 | ||
| 3sg2_A | 449 | Crystal Structure Of Gcamp2-T116v,D381y Length = 44 | 8e-26 | ||
| 3ekh_A | 449 | Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER | 8e-26 | ||
| 3ek8_A | 449 | Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER L | 9e-26 | ||
| 3evu_A | 449 | Crystal Structure Of Calcium Bound Dimeric Gcamp2, | 9e-26 | ||
| 4djc_A | 152 | 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCA | 9e-26 | ||
| 2wtk_C | 305 | Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2 | 9e-26 | ||
| 3iw4_A | 360 | Crystal Structure Of Pkc Alpha In Complex With Nvp- | 1e-25 | ||
| 3evr_A | 411 | Crystal Structure Of Calcium Bound Monomeric Gcamp2 | 1e-25 | ||
| 3o77_A | 415 | The Structure Of Ca2+ Sensor (Case-16) Length = 415 | 1e-25 | ||
| 3o78_A | 415 | The Structure Of Ca2+ Sensor (Case-12) Length = 415 | 1e-25 | ||
| 2ygg_B | 150 | Complex Of Cambr And Cam Length = 150 | 1e-25 | ||
| 2wel_D | 150 | Crystal Structure Of Su6656-Bound CalciumCALMODULIN | 1e-25 | ||
| 1iq5_A | 149 | CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE | 1e-25 | ||
| 2be6_A | 150 | 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaC | 1e-25 | ||
| 1prw_A | 149 | Crystal Structure Of Bovine Brain Ca++ Calmodulin I | 1e-25 | ||
| 1up5_B | 148 | Chicken Calmodulin Length = 148 | 1e-25 | ||
| 3ewt_A | 154 | Crystal Structure Of Calmodulin Complexed With A Pe | 1e-25 | ||
| 1cm1_A | 148 | Motions Of Calmodulin-Single-Conformer Refinement L | 1e-25 | ||
| 1cdl_A | 147 | Target Enzyme Recognition By Calmodulin: 2.4 Angstr | 2e-25 | ||
| 3sg5_A | 448 | Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linke | 2e-25 | ||
| 3sg5_A | 448 | Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linke | 1e-04 | ||
| 2jed_A | 352 | The Crystal Structure Of The Kinase Domain Of The P | 2e-25 | ||
| 3v8s_A | 410 | Human Rho-Associated Protein Kinase 1 (Rock 1) In C | 2e-25 | ||
| 3sg4_A | 448 | Crystal Structure Of Gcamp3-D380y, Lp(Linker 2) Len | 2e-25 | ||
| 3sg4_A | 448 | Crystal Structure Of Gcamp3-D380y, Lp(Linker 2) Len | 1e-04 | ||
| 1xfu_O | 149 | Crystal Structure Of Anthrax Edema Factor (ef) Trun | 2e-25 | ||
| 2esm_A | 415 | Crystal Structure Of Rock 1 Bound To Fasudil Length | 2e-25 | ||
| 2v55_A | 406 | Mechanism Of Multi-site Phosphorylation From A Rock | 2e-25 | ||
| 1ooj_A | 149 | Structural Genomics Of Caenorhabditis Elegans : Cal | 3e-25 | ||
| 2bkh_B | 149 | Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Struc | 3e-25 | ||
| 3sg3_A | 449 | Crystal Structure Of Gcamp3-D380y Length = 449 | 3e-25 | ||
| 3sg3_A | 449 | Crystal Structure Of Gcamp3-D380y Length = 449 | 1e-04 | ||
| 2bbm_A | 148 | Solution Structure Of A Calmodulin-Target Peptide C | 3e-25 | ||
| 2lv6_A | 148 | The Complex Between Ca-calmodulin And Skeletal Musc | 3e-25 | ||
| 3sg7_A | 448 | Crystal Structure Of Gcamp3-Kf(Linker 1) Length = 4 | 3e-25 | ||
| 3sg7_A | 448 | Crystal Structure Of Gcamp3-Kf(Linker 1) Length = 4 | 1e-04 | ||
| 3u0k_A | 440 | Crystal Structure Of The Genetically Encoded Calciu | 4e-25 | ||
| 3u0k_A | 440 | Crystal Structure Of The Genetically Encoded Calciu | 1e-04 | ||
| 2vb6_B | 149 | Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigo | 4e-25 | ||
| 2ix7_A | 145 | Structure Of Apo-Calmodulin Bound To Unconventional | 5e-25 | ||
| 2k0j_A | 148 | Solution Structure Of Cam Complexed To Drp1p Length | 5e-25 | ||
| 2k0j_A | 148 | Solution Structure Of Cam Complexed To Drp1p Length | 3e-04 | ||
| 1xqz_A | 300 | Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut | 6e-25 | ||
| 1dmo_A | 148 | Calmodulin, Nmr, 30 Structures Length = 148 | 6e-25 | ||
| 2vay_A | 146 | Calmodulin Complexed With Cav1.1 Iq Peptide Length | 6e-25 | ||
| 3txo_A | 353 | Pkc Eta Kinase In Complex With A Naphthyridine Leng | 7e-25 | ||
| 1cdm_A | 144 | Modulation Of Calmodulin Plasticity In Molecular Re | 7e-25 | ||
| 4gow_D | 144 | Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX | 7e-25 | ||
| 2xj0_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-4 Fro | 7e-25 | ||
| 3a99_A | 320 | Structure Of Pim-1 Kinase Crystallized In The Prese | 7e-25 | ||
| 4alv_A | 328 | Benzofuropyrimidinone Inhibitors Of Pim-1 Length = | 8e-25 | ||
| 1xws_A | 313 | Crystal Structure Of The Human Pim1 Kinase Domain L | 8e-25 | ||
| 1ahr_A | 146 | Calmodulin Mutant With A Two Residue Deletion In Th | 8e-25 | ||
| 2jfl_A | 325 | Crystal Structure Of Human Ste20-Like Kinase ( Diph | 9e-25 | ||
| 2jfm_A | 325 | Crystal Structure Of Human Ste20-Like Kinase (Unlig | 1e-24 | ||
| 3pm8_A | 197 | Cad Domain Of Pff0520w, Calcium Dependent Protein K | 1e-24 | ||
| 2j51_A | 325 | Crystal Structure Of Human Ste20-Like Kinase Bound | 1e-24 | ||
| 1yxs_A | 293 | Crystal Structure Of Kinase Pim1 With P123m Mutatio | 2e-24 | ||
| 2xiy_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-2 Fro | 2e-24 | ||
| 1exr_A | 148 | The 1.0 Angstrom Crystal Structure Of Ca+2 Bound Ca | 2e-24 | ||
| 1y0v_H | 146 | Crystal Structure Of Anthrax Edema Factor (Ef) In C | 2e-24 | ||
| 2f2u_A | 402 | Crystal Structure Of The Rho-Kinase Kinase Domain L | 2e-24 | ||
| 3f2a_A | 300 | Crystal Structure Of Human Pim-1 In Complex With Da | 2e-24 | ||
| 1k93_D | 144 | Crystal Structure Of The Adenylyl Cyclase Domain Of | 2e-24 | ||
| 2xix_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-1 Fro | 2e-24 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 2e-24 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 3e-24 | ||
| 3dcv_A | 328 | Crystal Structure Of Human Pim1 Kinase Complexed Wi | 3e-24 | ||
| 2obj_A | 333 | Crystal Structure Of Human Pim-1 Kinase In Complex | 3e-24 | ||
| 1ywv_A | 293 | Crystal Structures Of Proto-Oncogene Kinase Pim1: A | 3e-24 | ||
| 3uix_A | 298 | Crystal Structure Of Pim1 Kinase In Complex With Sm | 3e-24 | ||
| 3jxw_A | 294 | Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4- | 4e-24 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 4e-24 | ||
| 3r00_A | 299 | The Discovery Of Novel Benzofuran-2-Carboxylic Acid | 4e-24 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 4e-24 | ||
| 3dls_A | 335 | Crystal Structure Of Human Pas Kinase Bound To Adp | 4e-24 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 5e-24 | ||
| 1clm_A | 148 | Structure Of Paramecium Tetraurelia Calmodulin At 1 | 5e-24 | ||
| 3cxw_A | 314 | Crystal Structure Of Human Proto-Oncogene Serine Th | 6e-24 | ||
| 4dtk_A | 276 | Novel And Selective Pan-Pim Kinase Inhibitor Length | 6e-24 | ||
| 2bil_B | 313 | The Human Protein Kinase Pim1 In Complex With Its C | 6e-24 | ||
| 4apc_A | 350 | Crystal Structure Of Human Nima-Related Kinase 1 (N | 7e-24 | ||
| 3jpv_A | 313 | Crystal Structure Of Human Proto-Oncogene Serine Th | 7e-24 | ||
| 2j2i_B | 312 | Crystal Structure Of The Humab Pim1 In Complex With | 7e-24 | ||
| 1vrk_A | 148 | The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 | 9e-24 | ||
| 1qtx_A | 148 | The 1.65 Angstrom Structure Of Calmodulin Rs20 Pept | 9e-24 | ||
| 4aaa_A | 331 | Crystal Structure Of The Human Cdkl2 Kinase Domain | 1e-23 | ||
| 4a7c_A | 308 | Crystal Structure Of Pim1 Kinase With Etp46546 Leng | 1e-23 | ||
| 3c4e_A | 273 | Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7 | 2e-23 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 2e-23 | ||
| 3cy3_A | 314 | Crystal Structure Of Human Proto-Oncogene Serine Th | 2e-23 | ||
| 2bik_B | 313 | Human Pim1 Phosphorylated On Ser261 Length = 313 | 2e-23 | ||
| 3ma3_A | 313 | Crystal Structure Of Human Proto-Oncogene Serine Th | 2e-23 | ||
| 2l1w_A | 149 | The Solution Structure Of Soybean Calmodulin Isofor | 3e-23 | ||
| 2l1w_A | 149 | The Solution Structure Of Soybean Calmodulin Isofor | 8e-05 | ||
| 3k21_A | 191 | Crystal Structure Of Carboxy-Terminus Of Pfc0420w L | 3e-23 | ||
| 1s6j_A | 87 | N-Terminal Region Of The Ca2+-Saturated Calcium Reg | 3e-23 | ||
| 1deg_A | 142 | The Linker Of Des-Glu84 Calmodulin Is Bent As Seen | 4e-23 | ||
| 1qs7_A | 145 | The 1.8 Angstrom Structure Of Calmodulin Rs20 Pepti | 4e-23 | ||
| 4aqr_A | 149 | Crystal Structure Of A Calmodulin In Complex With T | 5e-23 | ||
| 1rfj_A | 149 | Crystal Structure Of Potato Calmodulin Pcm6 Length | 5e-23 | ||
| 1yhs_A | 273 | Crystal Structure Of Pim-1 Bound To Staurosporine L | 6e-23 | ||
| 2i0e_A | 353 | Structure Of Catalytic Domain Of Human Protein Kina | 6e-23 | ||
| 2uv2_A | 287 | Crystal Structure Of Human Ste20-Like Kinase Bound | 9e-23 | ||
| 1xfx_O | 149 | Crystal Structure Of Anthrax Edema Factor (Ef) In C | 1e-22 | ||
| 1v0o_A | 288 | Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho | 1e-22 | ||
| 3pfq_A | 674 | Crystal Structure And Allosteric Activation Of Prot | 1e-22 | ||
| 1niw_A | 148 | Crystal Structure Of Endothelial Nitric Oxide Synth | 1e-22 | ||
| 1v0b_A | 288 | Crystal Structure Of The T198a Mutant Of Pfpk5 Leng | 1e-22 | ||
| 1y6w_A | 148 | Trapped Intermediate Of Calmodulin Length = 148 | 1e-22 | ||
| 1ob3_A | 288 | Structure Of P. Falciparum Pfpk5 Length = 288 | 2e-22 | ||
| 4as0_A | 273 | Cyclometalated Phthalimides As Protein Kinase Inhib | 2e-22 | ||
| 2iwi_A | 312 | Crystal Structure Of The Human Pim2 In Complex With | 2e-22 | ||
| 2vwi_A | 303 | Structure Of The Osr1 Kinase, A Hypertension Drug T | 3e-22 | ||
| 3dak_A | 290 | Crystal Structure Of Domain-Swapped Osr1 Kinase Dom | 4e-22 | ||
| 4alu_A | 328 | Benzofuropyrimidinone Inhibitors Of Pim-1 Length = | 7e-22 | ||
| 2j7t_A | 302 | Crystal Structure Of Human Serine Threonine Kinase- | 8e-22 | ||
| 4bc6_A | 293 | Crystal Structure Of Human Serine Threonine Kinase- | 1e-21 | ||
| 2acx_A | 576 | Crystal Structure Of G Protein Coupled Receptor Kin | 1e-21 | ||
| 3nyn_A | 576 | Crystal Structure Of G Protein-Coupled Receptor Kin | 2e-21 | ||
| 3o4y_A | 196 | Crystal Structure Of Cad Domain Of The Plasmodium V | 2e-21 | ||
| 3oz6_A | 388 | Crystal Structure Of Mapk From Cryptosporidium Parv | 2e-21 | ||
| 3ekj_A | 449 | Calcium-Free Gcamp2 (Calcium Binding Deficient Muta | 2e-21 | ||
| 1ggz_A | 148 | Crystal Structure Of The Calmodulin-Like Protein (H | 4e-21 | ||
| 3gbz_A | 329 | Structure Of The Cmgc Cdk Kinase From Giardia Lambl | 5e-21 | ||
| 3l19_A | 214 | Crystal Structure Of Calcium Binding Domain Of Cpcd | 6e-21 | ||
| 3com_A | 314 | Crystal Structure Of Mst1 Kinase Length = 314 | 8e-21 | ||
| 2lhi_A | 176 | Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam L | 1e-20 | ||
| 2clq_A | 295 | Structure Of Mitogen-Activated Protein Kinase Kinas | 1e-20 | ||
| 3r63_A | 358 | Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | 2e-20 | ||
| 1pme_A | 380 | Structure Of Penta Mutant Human Erk2 Map Kinase Com | 3e-20 | ||
| 2wqm_A | 310 | Structure Of Apo Human Nek7 Length = 310 | 4e-20 | ||
| 2b9h_A | 353 | Crystal Structure Of Fus3 With A Docking Motif From | 5e-20 | ||
| 2f9g_A | 353 | Crystal Structure Of Fus3 Phosphorylated On Tyr182 | 5e-20 | ||
| 4aw2_A | 437 | Crystal Structure Of Cdc42 Binding Protein Kinase A | 5e-20 | ||
| 2b9f_A | 353 | Crystal Structure Of Non-Phosphorylated Fus3 Length | 5e-20 | ||
| 1wzy_A | 368 | Crystal Structure Of Human Erk2 Complexed With A Py | 5e-20 | ||
| 1tvo_A | 368 | The Structure Of Erk2 In Complex With A Small Molec | 5e-20 | ||
| 2y9q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 6e-20 | ||
| 3o71_A | 358 | Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length | 6e-20 | ||
| 2ojg_A | 380 | Crystal Structure Of Erk2 In Complex With N,n-dimet | 7e-20 | ||
| 4fv6_A | 360 | Crystal Structure Of The Erk2 Complexed With E57 Le | 7e-20 | ||
| 3zu7_A | 365 | Crystal Structure Of A Designed Selected Ankyrin Re | 7e-20 | ||
| 2z7l_A | 366 | Unphosphorylated Mitogen Activated Protein Kinase E | 7e-20 | ||
| 3c9w_A | 357 | Crystal Structure Of Erk-2 With Hypothemycin Covale | 7e-20 | ||
| 2fys_B | 364 | Crystal Structure Of Erk2 Complex With Kim Peptide | 7e-20 | ||
| 3vw6_A | 269 | Crystal Structure Of Human Apoptosis Signal-Regulat | 7e-20 | ||
| 3zuv_A | 364 | Crystal Structure Of A Designed Selected Ankyrin Re | 8e-20 | ||
| 2erk_A | 365 | Phosphorylated Map Kinase Erk2 Length = 365 | 8e-20 | ||
| 2x7f_A | 326 | Crystal Structure Of The Kinase Domain Of Human Tra | 9e-20 | ||
| 4fv7_A | 360 | Crystal Structure Of The Erk2 Complexed With E94 Le | 9e-20 | ||
| 2pk9_A | 317 | Structure Of The Pho85-pho80 Cdk-cyclin Complex Of | 9e-20 | ||
| 3qyw_A | 364 | Crystal Structure Of Erk2 In Complex With An Inhibi | 1e-19 | ||
| 3sa0_A | 360 | Complex Of Erk2 With Norathyriol Length = 360 | 1e-19 | ||
| 4fux_A | 360 | Crystal Structure Of The Erk2 Complexed With E75 Le | 1e-19 | ||
| 3qrx_A | 169 | Chlamydomonas Reinhardtii Centrin Bound To Melittin | 1e-19 | ||
| 2gph_A | 364 | Docking Motif Interactions In The Map Kinase Erk2 L | 1e-19 | ||
| 4h3q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 1e-19 | ||
| 3khe_A | 191 | Crystal Structure Of The Calcium-Loaded Calmodulin- | 1e-19 | ||
| 3qfv_A | 415 | Mrck Beta In Complex With Tpca-1 Length = 415 | 1e-19 | ||
| 4gsb_A | 364 | Monoclinic Crystal Form Of The Apo-Erk2 Length = 36 | 1e-19 | ||
| 3tku_A | 433 | Mrck Beta In Complex With Fasudil Length = 433 | 1e-19 | ||
| 1gol_A | 364 | Coordinates Of Rat Map Kinase Erk2 With An Arginine | 1e-19 | ||
| 2i6l_A | 320 | Crystal Structure Of Human Mitogen Activated Protei | 1e-19 | ||
| 3tei_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 1e-19 | ||
| 4ds7_A | 147 | Crystal Structure Of Yeast Calmodulin Bound To The | 1e-19 | ||
| 4e7w_A | 394 | Structure Of Gsk3 From Ustilago Maydis Length = 394 | 1e-19 | ||
| 1h4l_A | 292 | Structure And Regulation Of The Cdk5-P25(Nck5a) Com | 2e-19 | ||
| 4a4x_A | 279 | Nek2-Ede Bound To Cct248662 Length = 279 | 2e-19 | ||
| 1q5k_A | 414 | Crystal Structure Of Glycogen Synthase Kinase 3 In | 2e-19 | ||
| 1i09_A | 420 | Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len | 2e-19 | ||
| 1pyx_A | 422 | Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | 2e-19 | ||
| 1u5q_A | 348 | Crystal Structure Of The Tao2 Kinase Domain: Activa | 2e-19 | ||
| 4acc_A | 465 | Gsk3b In Complex With Inhibitor Length = 465 | 2e-19 | ||
| 1q3d_A | 424 | Gsk-3 Beta Complexed With Staurosporine Length = 42 | 2e-19 | ||
| 1ung_A | 292 | Structural Mechanism For The Inhibition Of Cdk5-P25 | 2e-19 | ||
| 3say_A | 430 | Crystal Structure Of Human Glycogen Synthase Kinase | 2e-19 | ||
| 1r0e_A | 391 | Glycogen Synthase Kinase-3 Beta In Complex With 3-I | 2e-19 | ||
| 1ua2_A | 346 | Crystal Structure Of Human Cdk7 Length = 346 | 3e-19 | ||
| 2gcd_A | 309 | Tao2 Kinase Domain-Staurosporine Structure Length = | 3e-19 | ||
| 4exu_A | 371 | Mapk13, Inactive Form Length = 371 | 4e-19 | ||
| 2w5a_A | 279 | Human Nek2 Kinase Adp-Bound Length = 279 | 4e-19 | ||
| 2zoq_A | 382 | Structural Dissection Of Human Mitogen-Activated Ki | 5e-19 | ||
| 3coi_A | 353 | Crystal Structure Of P38delta Kinase Length = 353 | 5e-19 | ||
| 2jav_A | 279 | Human Kinase With Pyrrole-Indolinone Ligand Length | 5e-19 | ||
| 4eqm_A | 294 | Structural Analysis Of Staphylococcus Aureus Serine | 6e-19 | ||
| 2qkr_A | 313 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 6e-19 | ||
| 2vd5_A | 412 | Structure Of Human Myotonic Dystrophy Protein Kinas | 7e-19 | ||
| 3niz_A | 311 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 7e-19 | ||
| 2zmc_A | 390 | Crystal Structure Of Human Mitotic Checkpoint Kinas | 7e-19 | ||
| 4dit_A | 382 | Crystal Structure Of Gsk3beta In Complex With A Imi | 8e-19 | ||
| 3hmn_A | 342 | Crystal Structure Of Human Mps1 Catalytic Domain In | 9e-19 | ||
| 3kf9_A | 149 | Crystal Structure Of The SdcenSKMLCK COMPLEX Length | 9e-19 | ||
| 2zmd_A | 390 | Crystal Structure Of Human Mps1 Catalytic Domain T6 | 9e-19 | ||
| 2o5k_A | 372 | Crystal Structure Of Gsk3beta In Complex With A Ben | 9e-19 | ||
| 4afj_A | 367 | 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec | 9e-19 | ||
| 4ec8_A | 373 | Structure Of Full Length Cdk9 In Complex With Cycli | 1e-18 | ||
| 1lkj_A | 146 | Nmr Structure Of Apo Calmodulin From Yeast Saccharo | 1e-18 | ||
| 1gng_A | 378 | Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With | 1e-18 | ||
| 3cek_A | 313 | Crystal Structure Of Human Dual Specificity Protein | 1e-18 | ||
| 3dbq_A | 343 | Crystal Structure Of Ttk Kinase Domain Length = 343 | 1e-18 | ||
| 3zrk_A | 371 | Identification Of 2-(4-Pyridyl)thienopyridinones As | 1e-18 | ||
| 1h8f_A | 352 | Glycogen Synthase Kinase 3 Beta. Length = 352 | 1e-18 | ||
| 3vum_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M7 | 1e-18 | ||
| 2x9e_A | 317 | Human Mps1 In Complex With Nms-P715 Length = 317 | 1e-18 | ||
| 4bcf_A | 331 | Structure Of Cdk9 In Complex With Cyclin T And A 2- | 1e-18 | ||
| 3vqu_A | 320 | Crystal Structure Of Human Mps1 Catalytic Domain In | 2e-18 | ||
| 3npc_A | 364 | Crystal Structure Of Jnk2 Complexed With Birb796 Le | 2e-18 | ||
| 3h9f_A | 313 | Crystal Structure Of Human Dual Specificity Protein | 2e-18 | ||
| 3blh_A | 331 | Crystal Structure Of Human Cdk9CYCLINT1 Length = 33 | 2e-18 | ||
| 3mi9_A | 351 | Crystal Structure Of Hiv-1 Tat Complexed With Human | 2e-18 | ||
| 1uv5_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With 6-Br | 2e-18 | ||
| 3vul_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 2e-18 | ||
| 3zdi_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 2e-18 | ||
| 3gb2_A | 353 | Gsk3beta Inhibitor Complex Length = 353 | 2e-18 | ||
| 2ow3_A | 352 | Glycogen Synthase Kinase-3 Beta In Complex With Bis | 2e-18 | ||
| 3f7z_A | 350 | X-ray Co-crystal Structure Of Glycogen Synthase Kin | 2e-18 | ||
| 3sd0_A | 350 | Identification Of A Glycogen Synthase Kinase-3b Inh | 2e-18 | ||
| 3c4x_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 3e-18 | ||
| 3t8o_A | 543 | Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu | 3e-18 | ||
| 3c4w_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 3e-18 | ||
| 3qc9_A | 543 | Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4 | 3e-18 | ||
| 1o9u_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 4e-18 | ||
| 3f88_A | 349 | Glycogen Synthase Kinase 3beta Inhibitor Complex Le | 4e-18 | ||
| 4dn5_A | 356 | Crystal Structure Of Nf-kb-inducing Kinase (nik) Le | 6e-18 | ||
| 3vuk_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M5 | 7e-18 | ||
| 3vui_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 8e-18 | ||
| 1na7_A | 329 | Crystal Structure Of The Catalytic Subunit Of Human | 8e-18 | ||
| 3e7o_A | 360 | Crystal Structure Of Jnk2 Length = 360 | 9e-18 | ||
| 3gc9_A | 370 | The Structure Of P38beta C119s, C162s In Complex Wi | 1e-17 | ||
| 3vuh_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M3 | 1e-17 | ||
| 4eon_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 2e-17 | ||
| 4eom_A | 301 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 2e-17 | ||
| 3e3p_A | 360 | Glycogen Synthase Kinase From Leishmania Major Leng | 2e-17 | ||
| 3vug_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 2e-17 | ||
| 3o17_A | 370 | Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3 | 2e-17 | ||
| 2xs0_A | 386 | Linear Binding Motifs For Jnk And For Calcineurin A | 2e-17 | ||
| 3gc8_A | 370 | The Structure Of P38beta C162s In Complex With A Di | 2e-17 | ||
| 2xrw_A | 371 | Linear Binding Motifs For Jnk And For Calcineurin A | 3e-17 | ||
| 1ukh_A | 369 | Structural Basis For The Selective Inhibition Of Jn | 3e-17 | ||
| 3vud_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 3e-17 | ||
| 3v3v_A | 379 | Structural And Functional Analysis Of Quercetagetin | 3e-17 | ||
| 4eop_A | 300 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 3e-17 | ||
| 4eoo_A | 299 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 3e-17 | ||
| 4eoi_A | 299 | Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc | 3e-17 | ||
| 4g3d_A | 371 | Crystal Structure Of Human Nf-kappab Inducing Kinas | 3e-17 | ||
| 4eoj_A | 302 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 3e-17 | ||
| 4eok_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 3e-17 | ||
| 4erw_A | 306 | Cdk2 In Complex With Staurosporine Length = 306 | 3e-17 | ||
| 3mtl_A | 324 | Crystal Structure Of The Pctaire1 Kinase In Complex | 4e-17 | ||
| 3fi3_A | 364 | Crystal Structure Of Jnk3 With Indazole Inhibitor, | 4e-17 | ||
| 1pmn_A | 364 | Crystal Structure Of Jnk3 In Complex With An Imidaz | 4e-17 | ||
| 1gz8_A | 299 | Human Cyclin Dependent Kinase 2 Complexed With The | 4e-17 | ||
| 2ok1_A | 365 | Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3 | 4e-17 | ||
| 3oxi_A | 362 | Design And Synthesis Of Disubstituted Thiophene And | 4e-17 | ||
| 2b1p_A | 355 | Inhibitor Complex Of Jnk3 Length = 355 | 4e-17 | ||
| 1jnk_A | 423 | The C-Jun N-Terminal Kinase (Jnk3s) Complexed With | 4e-17 | ||
| 2o0u_A | 364 | Crystal Structure Of Human Jnk3 Complexed With N-{3 | 4e-17 | ||
| 3ttj_A | 464 | Crystal Structure Of Jnk3 Complexed With Cc-359, A | 4e-17 | ||
| 4h36_A | 356 | Crystal Structure Of Jnk3 In Complex With Atf2 Pept | 5e-17 | ||
| 3ptg_A | 363 | Design And Synthesis Of A Novel, Orally Efficacious | 5e-17 | ||
| 2exc_X | 356 | Inhibitor Complex Of Jnk3 Length = 356 | 5e-17 | ||
| 3kvx_A | 364 | Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le | 5e-17 | ||
| 3pxf_A | 306 | Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N | 5e-17 | ||
| 1oit_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 5e-17 | ||
| 2iw6_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com | 6e-17 | ||
| 2w17_A | 299 | Cdk2 In Complex With The Imidazole Pyrimidine Amide | 6e-17 | ||
| 2jgz_A | 289 | Crystal Structure Of Phospho-Cdk2 In Complex With C | 6e-17 | ||
| 1fin_A | 298 | Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = | 6e-17 | ||
| 1vyw_A | 309 | Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = | 6e-17 | ||
| 3ezr_A | 300 | Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ | 6e-17 | ||
| 2r9s_A | 356 | C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu | 6e-17 | ||
| 1jst_A | 298 | Phosphorylated Cyclin-Dependent Kinase-2 Bound To C | 6e-17 | ||
| 1w98_A | 298 | The Structural Basis Of Cdk2 Activation By Cyclin E | 6e-17 | ||
| 3fv8_A | 355 | Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le | 6e-17 | ||
| 3bht_A | 300 | Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN | 6e-17 | ||
| 3pj8_A | 299 | Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D] | 6e-17 | ||
| 1pf8_A | 298 | Crystal Structure Of Human Cyclin-dependent Kinase | 6e-17 | ||
| 3elj_A | 369 | Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine | 7e-17 | ||
| 4eos_A | 300 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 7e-17 | ||
| 1e9h_A | 297 | Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex | 7e-17 | ||
| 4eoq_A | 301 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 7e-17 | ||
| 4bcq_A | 301 | Structure Of Cdk2 In Complex With Cyclin A And A 2- | 7e-17 | ||
| 3qhr_A | 298 | Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic | 7e-17 | ||
| 1h1p_A | 303 | Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP | 7e-17 | ||
| 3pze_A | 358 | Jnk1 In Complex With Inhibitor Length = 358 | 7e-17 | ||
| 1qmz_A | 299 | Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com | 7e-17 | ||
| 1ogu_A | 302 | Structure Of Human Thr160-phospho Cdk2/cyclin A Com | 7e-17 | ||
| 4i3z_A | 296 | Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES | 8e-17 | ||
| 3sls_A | 304 | Crystal Structure Of Human Mek-1 Kinase In Complex | 8e-17 | ||
| 3rzf_A | 677 | Crystal Structure Of Inhibitor Of Kappab Kinase Bet | 9e-17 | ||
| 3fi2_A | 353 | Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib | 9e-17 | ||
| 3gp0_A | 348 | Crystal Structure Of Human Mitogen Activated Protei | 9e-17 | ||
| 3qa8_A | 676 | Crystal Structure Of Inhibitor Of Kappa B Kinase Be | 9e-17 | ||
| 2g01_A | 370 | Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit | 9e-17 | ||
| 4b99_A | 398 | Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le | 1e-16 | ||
| 1gii_A | 298 | Human Cyclin Dependent Kinase 2 Complexed With The | 1e-16 | ||
| 4an2_A | 301 | Crystal Structures Of Human Mek1 With Carboxamide-B | 2e-16 | ||
| 4ic7_A | 442 | Crystal Structure Of The Erk5 Kinase Domain In Comp | 2e-16 | ||
| 2iw8_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82 | 2e-16 | ||
| 1oir_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 3e-16 | ||
| 1h01_A | 298 | Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili | 3e-16 | ||
| 3orn_A | 307 | Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In | 3e-16 | ||
| 1zy4_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 3e-16 | ||
| 2lmt_A | 148 | Nmr Structure Of Androcam Length = 148 | 4e-16 | ||
| 3ofm_A | 350 | Structure Of A Human Ck2alpha Prime, The Paralog Is | 8e-16 | ||
| 3zhp_C | 294 | Human Mst3 (stk24) In Complex With Mo25beta Length | 8e-16 | ||
| 3fme_A | 290 | Crystal Structure Of Human Mitogen-Activated Protei | 9e-16 | ||
| 3a7f_A | 303 | Human Mst3 Kinase Length = 303 | 1e-15 | ||
| 3ckw_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 1e-15 | ||
| 3gcp_A | 360 | Human P38 Map Kinase In Complex With Sb203580 Lengt | 1e-15 | ||
| 3ckx_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 1e-15 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 1e-15 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 1e-15 | ||
| 2y8o_A | 362 | Crystal Structure Of Human P38alpha Complexed With | 1e-15 | ||
| 1ove_A | 366 | The Structure Of P38 Alpha In Complex With A Dihydr | 1e-15 | ||
| 3p23_A | 432 | Crystal Structure Of The Human Kinase And Rnase Dom | 2e-15 | ||
| 1ds5_A | 332 | Dimeric Crystal Structure Of The Alpha Subunit In C | 2e-15 | ||
| 4anm_A | 335 | Complex Of Ck2 With A Cdc7 Inhibitor Length = 335 | 2e-15 | ||
| 1ywr_A | 360 | Crystal Structure Analysis Of Inactive P38 Kinase D | 2e-15 | ||
| 2qc6_A | 332 | Protein Kinase Ck2 In Complex With Dbc Length = 332 | 2e-15 | ||
| 3cik_A | 689 | Human Grk2 In Complex With Gbetagamma Subunits Leng | 2e-15 | ||
| 2puu_A | 348 | Crystal Structure Of P38 Complex With 1-(5-Tert-But | 2e-15 | ||
| 1yw2_A | 360 | Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | 2e-15 | ||
| 3pvg_A | 331 | Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C | 2e-15 | ||
| 1m2p_A | 325 | Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra | 2e-15 | ||
| 3ggf_A | 301 | Crystal Structure Of Human SerineTHREONINE-Protein | 2e-15 | ||
| 3krw_A | 688 | Human Grk2 In Complex With Gbetgamma Subunits And B | 2e-15 | ||
| 1daw_A | 327 | Crystal Structure Of A Binary Complex Of Protein Ki | 2e-15 | ||
| 4dgn_A | 326 | Crystal Structure Of Maize Ck2 In Complex With The | 2e-15 | ||
| 2xik_A | 294 | Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K | 2e-15 | ||
| 1omw_A | 689 | Crystal Structure Of The Complex Between G Protein- | 2e-15 | ||
| 3psc_A | 695 | Bovine Grk2 In Complex With Gbetagamma Subunits Len | 2e-15 | ||
| 4dgm_A | 326 | Crystal Structure Of Maize Ck2 In Complex With The | 2e-15 | ||
| 3kxg_A | 327 | Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun | 2e-15 | ||
| 3juh_A | 335 | Crystal Structure Of A Mutant Of Human Protein Kina | 2e-15 | ||
| 2ghl_A | 348 | Mutant Mus Musculus P38 Kinase Domain In Complex Wi | 2e-15 | ||
| 3e3b_X | 339 | Crystal Structure Of Catalytic Subunit Of Human Pro | 2e-15 | ||
| 2fso_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a) A | 2e-15 | ||
| 3d7z_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 2e-15 | ||
| 1lew_A | 360 | Crystal Structure Of Map Kinase P38 Complexed To Th | 3e-15 | ||
| 1zyc_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 3e-15 | ||
| 2pvh_A | 352 | Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri | 3e-15 | ||
| 3u87_A | 349 | Structure Of A Chimeric Construct Of Human Ck2alpha | 3e-15 | ||
| 3d83_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 3e-15 | ||
| 1bmk_A | 379 | The Complex Structure Of The Map Kinase P38SB218655 | 3e-15 | ||
| 3tg1_A | 380 | Crystal Structure Of P38alpha In Complex With A Map | 3e-15 | ||
| 3py3_A | 380 | Crystal Structure Of Phosphorylated P38alpha Map Ki | 3e-15 | ||
| 2fsl_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a+f3 | 3e-15 | ||
| 2fst_X | 367 | Mitogen Activated Protein Kinase P38alpha (d176a+f3 | 3e-15 | ||
| 4dgl_C | 335 | Crystal Structure Of The Ck2 Tetrameric Holoenzyme | 3e-15 | ||
| 2oza_B | 366 | Structure Of P38alpha Complex Length = 366 | 3e-15 | ||
| 4e5a_X | 360 | The W197a Mutant Of P38a Map Kinase Length = 360 | 3e-15 | ||
| 3q9w_A | 336 | Crystal Structure Of Human Ck2 Alpha In Complex Wit | 4e-15 | ||
| 4ewq_A | 383 | Human P38 Alpha Mapk In Complex With A Pyridazine B | 4e-15 | ||
| 3mpt_A | 371 | Crystal Structure Of P38 Kinase In Complex With A P | 4e-15 | ||
| 2r7i_A | 335 | Crystal Structure Of Catalytic Subunit Of Protein K | 4e-15 | ||
| 3bqc_A | 335 | High Ph-Value Crystal Structure Of Emodin In Comple | 4e-15 | ||
| 3p4k_A | 370 | The Third Conformation Of P38a Map Kinase Observed | 4e-15 | ||
| 1oz1_A | 372 | P38 Mitogen-Activated Kinase In Complex With 4-Azai | 4e-15 | ||
| 3oef_X | 360 | Crystal Structure Of Y323f Inactive Mutant Of P38al | 4e-15 | ||
| 2gfs_A | 372 | P38 Kinase Crystal Structure In Complex With Ro3201 | 4e-15 | ||
| 1jwh_A | 337 | Crystal Structure Of Human Protein Kinase Ck2 Holoe | 4e-15 | ||
| 1pjk_A | 334 | Crystal Structure Of A C-terminal Deletion Mutant O | 4e-15 | ||
| 3h30_A | 334 | Crystal Structure Of The Catalytic Subunit Of Human | 4e-15 | ||
| 2baq_A | 365 | P38alpha Bound To Ro3201195 Length = 365 | 4e-15 | ||
| 3od6_X | 360 | Crystal Structure Of P38alpha Y323t Active Mutant L | 4e-15 | ||
| 1di9_A | 360 | The Structure Of P38 Mitogen-Activated Protein Kina | 4e-15 | ||
| 3odz_X | 360 | Crystal Structure Of P38alpha Y323r Active Mutant L | 4e-15 | ||
| 2gtm_A | 348 | Mutated Mouse P38 Map Kinase Domain In Complex With | 4e-15 | ||
| 3gcu_A | 360 | Human P38 Map Kinase In Complex With Rl48 Length = | 4e-15 | ||
| 2npq_A | 367 | A Novel Lipid Binding Site In The P38 Alpha Map Kin | 4e-15 | ||
| 1m7q_A | 366 | Crystal Structure Of P38 Map Kinase In Complex With | 4e-15 | ||
| 3e92_A | 371 | Crystal Structure Of P38 Kinase In Complex With A B | 4e-15 | ||
| 3ody_X | 360 | Crystal Structure Of P38alpha Y323q Active Mutant L | 4e-15 | ||
| 3q04_A | 328 | Crystal Structure Of The Apo-Form Of Human Ck2 Alph | 4e-15 | ||
| 2baj_A | 365 | P38alpha Bound To Pyrazolourea Length = 365 | 4e-15 | ||
| 3hrb_A | 359 | P38 Kinase Crystal Structure In Complex With Small | 4e-15 | ||
| 3k3j_A | 362 | P38alpha Bound To Novel Dfg-Out Compound Pf-0041612 | 4e-15 | ||
| 3kq7_A | 380 | Structure Of Human P38alpha With N-[4-Methyl-3-(6-{ | 4e-15 | ||
| 3nga_A | 333 | Human Ck2 Catalytic Domain In Complex With Cx-4945 | 4e-15 | ||
| 3dt1_A | 383 | P38 Complexed With A Quinazoline Inhibitor Length = | 4e-15 | ||
| 3nsz_A | 330 | Human Ck2 Catalytic Domain In Complex With Amppn Le | 5e-15 | ||
| 3mb6_A | 331 | Human Ck2 Catalytic Domain In Complex With A Difura | 5e-15 | ||
| 2zjw_A | 340 | Crystal Structure Of Human Ck2 Alpha Complexed With | 5e-15 | ||
| 1bi8_A | 326 | Mechanism Of G1 Cyclin Dependent Kinase Inhibition | 5e-15 | ||
| 2bal_A | 365 | P38alpha Map Kinase Bound To Pyrazoloamine Length = | 5e-15 | ||
| 3hvc_A | 362 | Crystal Structure Of Human P38alpha Map Kinase Leng | 5e-15 | ||
| 1bl6_A | 379 | The Complex Structure Of The Map Kinase P38SB216995 | 5e-15 | ||
| 2lgc_A | 359 | Joint Nmr And X-Ray Refinement Reveals The Structur | 5e-15 | ||
| 3zsg_A | 362 | X-Ray Structure Of P38alpha Bound To Tak-715 Length | 5e-15 | ||
| 3oht_A | 389 | Crystal Structure Of Salmo Salar P38alpha Length = | 5e-15 | ||
| 1jow_B | 308 | Crystal Structure Of A Complex Of Human Cdk6 And A | 5e-15 | ||
| 1ian_A | 366 | Human P38 Map Kinase Inhibitor Complex Length = 366 | 6e-15 | ||
| 1zzl_A | 351 | Crystal Structure Of P38 With Triazolopyridine Leng | 6e-15 | ||
| 3k3i_A | 350 | P38alpha Bound To Novel Dgf-Out Compound Pf-0021595 | 6e-15 | ||
| 3nnx_A | 354 | Crystal Structure Of Phosphorylated P38 Alpha In Co | 6e-15 | ||
| 3s3i_A | 349 | P38 Kinase Crystal Structure In Complex With Small | 6e-15 | ||
| 3nnu_A | 354 | Crystal Structure Of P38 Alpha In Complex With Dp13 | 6e-15 | ||
| 3hec_A | 348 | P38 In Complex With Imatinib Length = 348 | 6e-15 | ||
| 3nup_A | 307 | Cdk6 (Monomeric) In Complex With Inhibitor Length = | 6e-15 | ||
| 2obh_A | 143 | Centrin-Xpc Peptide Length = 143 | 7e-15 | ||
| 2lhh_A | 128 | Solution Structure Of Ca2+-Bound Ycam Length = 128 | 7e-15 | ||
| 2lhh_A | 128 | Solution Structure Of Ca2+-Bound Ycam Length = 128 | 3e-04 | ||
| 4g31_A | 299 | Crystal Structure Of Gsk6414 Bound To Perk (R587-R1 | 8e-15 | ||
| 3f69_A | 311 | Crystal Structure Of The Mycobacterium Tuberculosis | 8e-15 | ||
| 3ll8_B | 155 | Crystal Structure Of Calcineurin In Complex With Ak | 8e-15 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 9e-15 | ||
| 3fi4_A | 372 | P38 Kinase Crystal Structure In Complex With Ro4499 | 9e-15 | ||
| 2p6b_B | 156 | Crystal Structure Of Human Calcineurin In Complex W | 9e-15 | ||
| 1tco_B | 169 | Ternary Complex Of A Calcineurin A Fragment, Calcin | 1e-14 | ||
| 1mf8_B | 170 | Crystal Structure Of Human Calcineurin Complexed Wi | 1e-14 | ||
| 3mh2_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 1e-14 | ||
| 3f61_A | 311 | Crystal Structure Of M. Tuberculosis Pknb Leu33aspV | 1e-14 | ||
| 1cm8_A | 367 | Phosphorylated Map Kinase P38-Gamma Length = 367 | 1e-14 | ||
| 2jkm_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 1e-14 | ||
| 2etm_A | 281 | Crystal Structure Of Focal Adhesion Kinase Domain C | 1e-14 | ||
| 4ebw_A | 304 | Structure Of Focal Adhesion Kinase Catalytic Domain | 1e-14 | ||
| 1mp8_A | 281 | Crystal Structure Of Focal Adhesion Kinase (Fak) Le | 1e-14 | ||
| 3pxk_A | 282 | Focal Adhesion Kinase Catalytic Domain In Complex W | 1e-14 | ||
| 3bz3_A | 276 | Crystal Structure Analysis Of Focal Adhesion Kinase | 1e-14 | ||
| 2j0m_B | 276 | Crystal Structure A Two-Chain Complex Between The F | 1e-14 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 1e-14 | ||
| 3vn9_A | 340 | Rifined Crystal Structure Of Non-Phosphorylated Map | 1e-14 | ||
| 3ori_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain L33d | 2e-14 | ||
| 4azf_A | 417 | Human Dyrk2 In Complex With Leucettine L41 Length = | 2e-14 | ||
| 4euu_A | 319 | Structure Of Bx-795 Complexed With Human Tbk1 Kinas | 2e-14 | ||
| 3kvw_A | 429 | Crystal Structure Of Dual-Specificity Tyrosine Phos | 2e-14 | ||
| 1mru_A | 311 | Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob | 2e-14 | ||
| 3k2l_A | 429 | Crystal Structure Of Dual-Specificity Tyrosine Phos | 2e-14 | ||
| 4eut_A | 396 | Structure Of Bx-795 Complexed With Unphosphorylated | 2e-14 | ||
| 3orm_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain D76a | 2e-14 | ||
| 2j0j_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 2e-14 | ||
| 1ytz_C | 162 | Crystal Structure Of Skeletal Muscle Troponin In Th | 2e-14 | ||
| 2w49_0 | 159 | Isometrically Contracting Insect Asynchronous Fligh | 3e-14 | ||
| 4tnc_A | 162 | Refined Structure Of Chicken Skeletal Muscle Tropon | 3e-14 | ||
| 3gi3_A | 360 | Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana | 3e-14 | ||
| 3o8p_A | 360 | Conformational Plasticity Of P38 Map Kinase Dfg Mot | 3e-14 | ||
| 1tnw_A | 162 | Nmr Solution Structure Of Calcium Saturated Skeleta | 3e-14 | ||
| 3kxx_A | 317 | Structure Of The Mutant Fibroblast Growth Factor Re | 3e-14 | ||
| 3tt0_A | 382 | Co-Structure Of Fibroblast Growth Factor Receptor 1 | 3e-14 | ||
| 3p1a_A | 311 | Structure Of Human Membrane-Associated Tyrosine- An | 3e-14 | ||
| 1zxe_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 3e-14 | ||
| 5tnc_A | 162 | Refined Crystal Structure Of Troponin C From Turkey | 4e-14 | ||
| 3rhx_B | 306 | Crystal Structure Of The Catalytic Domain Of Fgfr1 | 4e-14 | ||
| 3c4f_A | 302 | Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M | 4e-14 | ||
| 3js2_A | 317 | Crystal Structure Of Minimal Kinase Domain Of Fibro | 4e-14 | ||
| 2w99_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 4e-14 | ||
| 2w96_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 4e-14 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 4e-14 | ||
| 3gql_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 4e-14 | ||
| 1o6y_A | 299 | Catalytic Domain Of Pknb Kinase From Mycobacterium | 4e-14 | ||
| 1fgk_A | 310 | Crystal Structure Of The Tyrosine Kinase Domain Of | 4e-14 | ||
| 4f63_A | 309 | Crystal Structure Of Human Fibroblast Growth Factor | 4e-14 | ||
| 3dtc_A | 271 | Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp | 4e-14 | ||
| 2j0k_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 5e-14 | ||
| 3mh0_A | 360 | Mutagenesis Of P38 Map Kinase Eshtablishes Key Role | 5e-14 | ||
| 2y4i_C | 395 | Ksr2-Mek1 Heterodimer Length = 395 | 5e-14 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 5e-14 | ||
| 3g33_A | 308 | Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | 5e-14 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 6e-14 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 6e-14 | ||
| 2jkk_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 6e-14 | ||
| 3mh3_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 6e-14 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 6e-14 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 6e-14 | ||
| 3mh1_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 7e-14 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 7e-14 | ||
| 2w9f_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 7e-14 | ||
| 3eb0_A | 383 | Crystal Structure Of Cgd4_240 From Cryptosporidium | 7e-14 | ||
| 4g3g_A | 350 | Crystal Structure Of Murine Nf-kappab Inducing Kina | 7e-14 | ||
| 2j0l_A | 276 | Crystal Structure Of A The Active Conformation Of T | 9e-14 | ||
| 3eqc_A | 360 | X-Ray Structure Of The Human Mitogen-Activated Prot | 9e-14 | ||
| 3enm_A | 316 | The Structure Of The Map2k Mek6 Reveals An Autoinhi | 1e-13 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 1e-13 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 1e-13 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 1e-13 | ||
| 1a2x_A | 159 | Complex Of Troponin C With A 47 Residue (1-47) Frag | 1e-13 | ||
| 3gqi_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 1e-13 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 1e-13 | ||
| 1s9j_A | 341 | X-Ray Structure Of The Human Mitogen-Activated Prot | 1e-13 | ||
| 3mbl_A | 328 | Crystal Structure Of The Human Mitogen-Activated Pr | 1e-13 | ||
| 3dv3_A | 322 | Mek1 With Pf-04622664 Bound Length = 322 | 1e-13 | ||
| 2p55_A | 333 | X-Ray Structure Of The Human Mitogen-Activated Prot | 1e-13 | ||
| 1uwh_A | 276 | The Complex Of Wild Type B-Raf And Bay439006 Length | 1e-13 | ||
| 4g3f_A | 336 | Crystal Structure Of Murine Nf-kappab Inducing Kina | 2e-13 | ||
| 1tcf_A | 159 | Crystal Structure Of Calcium-Saturated Rabbit Skele | 2e-13 | ||
| 4g3c_A | 352 | Crystal Structure Of Apo Murine Nf-kappab Inducing | 2e-13 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 2e-13 | ||
| 2pvy_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-13 | ||
| 2pzp_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-13 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 3e-13 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 4e-13 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 4e-13 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 4e-13 | ||
| 2pz5_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 4e-13 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 5e-13 | ||
| 2pwl_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 5e-13 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 5e-13 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 5e-13 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 5e-13 | ||
| 3sdj_A | 448 | Structure Of Rnase-Inactive Point Mutant Of Oligome | 6e-13 | ||
| 3ri1_A | 313 | Crystal Structure Of The Catalytic Domain Of Fgfr2 | 6e-13 | ||
| 1gjo_A | 316 | The Fgfr2 Tyrosine Kinase Domain Length = 316 | 6e-13 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 6e-13 | ||
| 3b2t_A | 311 | Structure Of Phosphotransferase Length = 311 | 6e-13 | ||
| 3fbv_A | 448 | Crystal Structure Of The Oligomer Formed By The Kin | 6e-13 | ||
| 2psq_A | 370 | Crystal Structure Of Unphosphorylated Unactivated W | 7e-13 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 7e-13 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 7e-13 | ||
| 2pzr_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 8e-13 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 8e-13 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 8e-13 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 8e-13 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 8e-13 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 8e-13 | ||
| 2py3_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 9e-13 | ||
| 2pvf_A | 334 | Crystal Structure Of Tyrosine Phosphorylated Activa | 9e-13 | ||
| 3ll6_A | 337 | Crystal Structure Of The Human Cyclin G Associated | 9e-13 | ||
| 2q0b_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 1e-12 | ||
| 3bea_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P | 1e-12 | ||
| 3cly_A | 334 | Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase | 1e-12 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 1e-12 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 1e-12 | ||
| 2i1m_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An | 2e-12 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 2e-12 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 2e-12 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 2e-12 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 2e-12 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 2e-12 | ||
| 3aln_A | 327 | Crystal Structure Of Human Non-Phosphorylated Mkk4 | 2e-12 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 2e-12 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 2e-12 | ||
| 3lj0_A | 434 | Ire1 Complexed With Adp And Quercetin Length = 434 | 2e-12 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 2e-12 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 2e-12 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 2e-12 | ||
| 2rio_A | 434 | Structure Of The Dual Enzyme Ire1 Reveals The Basis | 2e-12 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 2e-12 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 2e-12 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 2e-12 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 2e-12 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 3e-12 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 3e-12 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 3e-12 | ||
| 1s9i_A | 354 | X-Ray Structure Of The Human Mitogen-Activated Prot | 3e-12 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 3e-12 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 3e-12 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 3e-12 | ||
| 2vwu_A | 302 | Ephb4 Kinase Domain Inhibitor Complex Length = 302 | 4e-12 | ||
| 3vnt_A | 318 | Crystal Structure Of The Kinase Domain Of Human Veg | 4e-12 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 5e-12 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 5e-12 | ||
| 2rei_A | 318 | Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep | 5e-12 | ||
| 1q8y_A | 373 | The Structure Of The Yeast Sr Protein Kinase, Sky1p | 5e-12 | ||
| 1how_A | 373 | The X-Ray Crystal Structure Of Sky1p, An Sr Protein | 6e-12 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 6e-12 | ||
| 3omv_A | 307 | Crystal Structure Of C-Raf (Raf-1) Length = 307 | 7e-12 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 8e-12 | ||
| 2lan_A | 167 | Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc | 9e-12 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 9e-12 | ||
| 1dtl_A | 161 | Crystal Structure Of Calcium-Saturated (3ca2+) Card | 1e-11 | ||
| 1vr2_A | 316 | Human Vascular Endothelial Growth Factor Receptor 2 | 1e-11 | ||
| 1la0_A | 161 | Solution Structure Of Calcium Saturated Cardiac Tro | 1e-11 | ||
| 1aj4_A | 161 | Structure Of Calcium-Saturated Cardiac Troponin C, | 1e-11 | ||
| 3n9x_A | 432 | Crystal Structure Of Map Kinase From Plasmodium Ber | 1e-11 | ||
| 2ogv_A | 317 | Crystal Structure Of The Autoinhibited Human C-Fms | 1e-11 | ||
| 3lcd_A | 329 | Inhibitor Bound To A Dfg-In Structure Of The Kinase | 1e-11 | ||
| 2dyl_A | 318 | Crystal Structure Of Human Mitogen-Activated Protei | 1e-11 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 1e-11 | ||
| 4agc_A | 353 | Crystal Structure Of Vegfr2 (Juxtamembrane And Kina | 1e-11 | ||
| 2xir_A | 316 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 1e-11 | ||
| 3ox5_A | 153 | Crystal Structure Of The Calcium Sensor Calcium-Bin | 2e-11 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 2e-11 | ||
| 2bl0_B | 145 | Physarum Polycephalum Myosin Ii Regulatory Domain L | 2e-11 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 2e-11 | ||
| 3oct_A | 265 | Crystal Structure Of Bruton's Tyrosine Kinase Mutan | 2e-11 | ||
| 2i0v_A | 335 | C-Fms Tyrosine Kinase In Complex With A Quinolone I | 2e-11 | ||
| 3qup_A | 323 | Inhibitor Bound Structure Of The Kinase Domain Of T | 2e-11 | ||
| 3ewh_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 3e-11 | ||
| 2oh4_A | 316 | Crystal Structure Of Vegfr2 With A Benzimidazole-Ur | 3e-11 | ||
| 2bl0_C | 142 | Physarum Polycephalum Myosin Ii Regulatory Domain L | 3e-11 | ||
| 2ggm_A | 172 | Human Centrin 2 Xeroderma Pigmentosum Group C Prote | 3e-11 | ||
| 1ywn_A | 316 | Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p | 3e-11 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 3e-11 | ||
| 3u6j_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 4e-11 | ||
| 3fpq_A | 290 | Crystal Structure Of The Kinase Domain Of Wnk1 Leng | 4e-11 | ||
| 3bi6_A | 287 | Wee1 Kinase Complex With Inhibitor Pd352396 Length | 4e-11 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 4e-11 | ||
| 1x8b_A | 289 | Structure Of Human Wee1a Kinase: Kinase Domain Comp | 4e-11 | ||
| 1z57_A | 339 | Crystal Structure Of Human Clk1 In Complex With 10z | 4e-11 | ||
| 2in6_A | 287 | Wee1 Kinase Complex With Inhibitor Pd311839 Length | 4e-11 | ||
| 2p2i_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 4e-11 | ||
| 2z2w_A | 285 | Humand Wee1 Kinase Complexed With Inhibitor Pf03357 | 5e-11 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 5e-11 | ||
| 3ox6_A | 153 | Crystal Structure Of The Calcium Sensor Calcium-Bin | 6e-11 | ||
| 3lco_A | 324 | Inhibitor Bound To A Dfg-Out Structure Of The Kinas | 6e-11 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 6e-11 | ||
| 2p2h_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 6e-11 | ||
| 3ifk_A | 90 | Crystal Structure Of Calcium-Saturated Calmodulin N | 7e-11 | ||
| 2pml_X | 348 | Crystal Structure Of Pfpk7 In Complex With An Atp A | 7e-11 | ||
| 1u59_A | 287 | Crystal Structure Of The Zap-70 Kinase Domain In Co | 8e-11 | ||
| 2vx3_A | 382 | Crystal Structure Of The Human Dual Specificity Tyr | 9e-11 | ||
| 2xyu_A | 285 | Crystal Structure Of Epha4 Kinase Domain In Complex | 9e-11 | ||
| 2y6m_A | 291 | Crystal Structure Of Epha4 Kinase Domain Length = 2 | 1e-10 | ||
| 3anq_A | 368 | Human Dyrk1aINHIBITOR COMPLEX Length = 368 | 1e-10 | ||
| 2jt0_A | 161 | Solution Structure Of F104w Cardiac Troponin C Leng | 1e-10 | ||
| 2jt3_A | 161 | Solution Structure Of F153w Cardiac Troponin C Leng | 1e-10 | ||
| 3sv0_A | 483 | Crystal Structure Of Casein Kinase-1 Like Protein I | 1e-10 | ||
| 2vag_A | 339 | Crystal Structure Of Di-Phosphorylated Human Clk1 I | 1e-10 | ||
| 3rgf_A | 405 | Crystal Structure Of Human Cdk8CYCC Length = 405 | 1e-10 | ||
| 2a19_B | 284 | Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng | 1e-10 | ||
| 1eh4_A | 298 | Binary Complex Of Casein Kinase-1 From S. Pombe Wit | 1e-10 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 1e-10 | ||
| 2csn_A | 297 | Binary Complex Of Casein Kinase-1 With Cki7 Length | 2e-10 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 2e-10 | ||
| 2hen_A | 286 | Crystal Structure Of The Ephb2 Receptor Kinase Doma | 2e-10 | ||
| 3nie_A | 429 | Crystal Structure Of Pf11_0147 Length = 429 | 2e-10 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 2e-10 | ||
| 1fvr_A | 327 | Tie2 Kinase Domain Length = 327 | 2e-10 | ||
| 2oo8_X | 317 | Synthesis, Structural Analysis, And Sar Studies Of | 2e-10 | ||
| 4aze_A | 382 | Human Dyrk1a In Complex With Leucettine L41 Length | 2e-10 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 2e-10 | ||
| 2jnf_A | 158 | Solution Structure Of Fly Troponin C, Isoform F1 Le | 2e-10 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 2e-10 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 2e-10 | ||
| 2jtz_A | 161 | Solution Structure And Chemical Shift Assignments O | 2e-10 | ||
| 2jt8_A | 161 | Solution Structure Of The F153-To-5-Flurotryptophan | 2e-10 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 2e-10 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 2e-10 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 3e-10 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 3e-10 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 3e-10 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 3e-10 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 3e-10 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 3e-10 | ||
| 3g0f_A | 336 | Kit Kinase Domain Mutant D816h In Complex With Suni | 3e-10 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 3e-10 | ||
| 2y4i_B | 319 | Ksr2-Mek1 Heterodimer Length = 319 | 3e-10 | ||
| 3llt_A | 360 | Crystal Structure Of Pf14_0431, Kinase Domain Lengt | 3e-10 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 3e-10 | ||
| 2kn2_A | 92 | Solution Structure Of The C-Terminal Domain Of Soyb | 4e-10 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 4e-10 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 4e-10 | ||
| 3fwb_A | 161 | Sac3:sus1:cdc31 Complex Length = 161 | 4e-10 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 4e-10 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 4e-10 | ||
| 2ozo_A | 613 | Autoinhibited Intact Human Zap-70 Length = 613 | 4e-10 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 4e-10 | ||
| 1pkg_A | 329 | Structure Of A C-kit Kinase Product Complex Length | 5e-10 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 5e-10 | ||
| 1t46_A | 313 | Structural Basis For The Autoinhibition And Sti-571 | 5e-10 | ||
| 3g0e_A | 336 | Kit Kinase Domain In Complex With Sunitinib Length | 5e-10 | ||
| 3uiu_A | 306 | Crystal Structure Of Apo-Pkr Kinase Domain Length = | 5e-10 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 5e-10 | ||
| 1t45_A | 331 | Structural Basis For The Autoinhibition And Sti-571 | 6e-10 | ||
| 1cmf_A | 73 | Nmr Solution Structure Of Apo Calmodulin Carboxy-Te | 6e-10 | ||
| 1yru_B | 74 | Crystal Structure Analysis Of The Adenylyl Cyclaes | 6e-10 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 6e-10 | ||
| 2wqb_A | 324 | Structure Of The Tie2 Kinase Domain In Complex With | 6e-10 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 7e-10 | ||
| 2rob_A | 70 | Solution Structure Of Calcium Bound Soybean Calmodu | 8e-10 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 8e-10 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 8e-10 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 9e-10 | ||
| 3b32_A | 75 | Crystal Structure Of Calcium-Saturated Calmodulin N | 9e-10 | ||
| 3b32_A | 75 | Crystal Structure Of Calcium-Saturated Calmodulin N | 3e-04 | ||
| 1ak8_A | 76 | Nmr Solution Structure Of Cerium-Loaded Calmodulin | 9e-10 | ||
| 1ak8_A | 76 | Nmr Solution Structure Of Cerium-Loaded Calmodulin | 3e-04 | ||
| 2llo_A | 80 | Solution Nmr-Derived Structure Of Calmodulin N-Lobe | 1e-09 | ||
| 2llo_A | 80 | Solution Nmr-Derived Structure Of Calmodulin N-Lobe | 4e-04 | ||
| 3uct_A | 79 | Structure Of Mn2+-Bound N-Terminal Domain Of Calmod | 1e-09 | ||
| 3uct_A | 79 | Structure Of Mn2+-Bound N-Terminal Domain Of Calmod | 3e-04 | ||
| 1mqb_A | 333 | Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro | 1e-09 | ||
| 1i44_A | 306 | Crystallographic Studies Of An Activation Loop Muta | 1e-09 | ||
| 2lqc_A | 77 | Nmr Solution Structure Of A Ca2+-Calmodulin With A | 1e-09 | ||
| 2lqc_A | 77 | Nmr Solution Structure Of A Ca2+-Calmodulin With A | 3e-04 | ||
| 3cjg_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 1e-09 | ||
| 2jnx_A | 134 | Nmr Derived Solution Structure Of An Ef-Hand Calciu | 1e-09 | ||
| 1f70_A | 76 | Refined Solution Structure Of Calmodulin N-Terminal | 1e-09 | ||
| 1f70_A | 76 | Refined Solution Structure Of Calmodulin N-Terminal | 3e-04 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 1e-09 | ||
| 1zot_B | 69 | Crystal Structure Analysis Of The CyaaC-Cam With Pm | 1e-09 | ||
| 2gv5_A | 161 | Crystal Structure Of Sfi1pCDC31P COMPLEX Length = 1 | 1e-09 | ||
| 1fw4_A | 71 | Crystal Structure Of E. Coli Fragment Tr2c From Cal | 1e-09 | ||
| 1f71_A | 67 | Refined Solution Structure Of Calmodulin C-Terminal | 1e-09 | ||
| 2col_B | 67 | Crystal Structure Analysis Of CyaaC-Cam With Pyroph | 1e-09 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 1e-09 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 1e-09 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 1e-09 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 1e-09 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 1e-09 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 1e-09 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 1e-09 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 2e-09 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 2e-09 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 2e-09 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 2e-09 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 2e-09 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 2e-09 | ||
| 3c7q_A | 316 | Structure Of Vegfr2 Kinase Domain In Complex With B | 2e-09 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 2e-09 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 2e-09 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 2e-09 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 2e-09 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 2e-09 | ||
| 3eta_A | 317 | Kinase Domain Of Insulin Receptor Complexed With A | 3e-09 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 3e-09 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 3e-09 |
| >pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484 | Back alignment and structure |
|
| >pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507 | Back alignment and structure |
|
| >pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508 | Back alignment and structure |
|
| >pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484 | Back alignment and structure |
|
| >pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494 | Back alignment and structure |
|
| >pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467 | Back alignment and structure |
|
| >pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486 | Back alignment and structure |
|
| >pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504 | Back alignment and structure |
|
| >pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332 | Back alignment and structure |
|
| >pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320 | Back alignment and structure |
|
| >pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315 | Back alignment and structure |
|
| >pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294 | Back alignment and structure |
|
| >pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277 | Back alignment and structure |
|
| >pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334 | Back alignment and structure |
|
| >pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298 | Back alignment and structure |
|
| >pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293 | Back alignment and structure |
|
| >pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349 | Back alignment and structure |
|
| >pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287 | Back alignment and structure |
|
| >pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286 | Back alignment and structure |
|
| >pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304 | Back alignment and structure |
|
| >pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313 | Back alignment and structure |
|
| >pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327 | Back alignment and structure |
|
| >pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362 | Back alignment and structure |
|
| >pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444 | Back alignment and structure |
|
| >pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301 | Back alignment and structure |
|
| >pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269 | Back alignment and structure |
|
| >pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282 | Back alignment and structure |
|
| >pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284 | Back alignment and structure |
|
| >pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295 | Back alignment and structure |
|
| >pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | Back alignment and structure |
|
| >pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336 | Back alignment and structure |
|
| >pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase From Arabidopsis Thaliana Length = 166 | Back alignment and structure |
|
| >pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285 | Back alignment and structure |
|
| >pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326 | Back alignment and structure |
|
| >pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278 | Back alignment and structure |
|
| >pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278 | Back alignment and structure |
|
| >pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334 | Back alignment and structure |
|
| >pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312 | Back alignment and structure |
|
| >pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334 | Back alignment and structure |
|
| >pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | Back alignment and structure |
|
| >pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351 | Back alignment and structure |
|
| >pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295 | Back alignment and structure |
|
| >pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294 | Back alignment and structure |
|
| >pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295 | Back alignment and structure |
|
| >pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283 | Back alignment and structure |
|
| >pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304 | Back alignment and structure |
|
| >pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361 | Back alignment and structure |
|
| >pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351 | Back alignment and structure |
|
| >pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The Presence Of Ca2+ And The Junction Domain (Jd) Length = 188 | Back alignment and structure |
|
| >pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285 | Back alignment and structure |
|
| >pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288 | Back alignment and structure |
|
| >pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365 | Back alignment and structure |
|
| >pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321 | Back alignment and structure |
|
| >pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321 | Back alignment and structure |
|
| >pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323 | Back alignment and structure |
|
| >pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323 | Back alignment and structure |
|
| >pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322 | Back alignment and structure |
|
| >pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322 | Back alignment and structure |
|
| >pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361 | Back alignment and structure |
|
| >pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329 | Back alignment and structure |
|
| >pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277 | Back alignment and structure |
|
| >pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298 | Back alignment and structure |
|
| >pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443 | Back alignment and structure |
|
| >pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325 | Back alignment and structure |
|
| >pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419 | Back alignment and structure |
|
| >pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298 | Back alignment and structure |
|
| >pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342 | Back alignment and structure |
|
| >pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346 | Back alignment and structure |
|
| >pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330 | Back alignment and structure |
|
| >pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342 | Back alignment and structure |
|
| >pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387 | Back alignment and structure |
|
| >pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317 | Back alignment and structure |
|
| >pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336 | Back alignment and structure |
|
| >pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307 | Back alignment and structure |
|
| >pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373 | Back alignment and structure |
|
| >pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320 | Back alignment and structure |
|
| >pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406 | Back alignment and structure |
|
| >pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400 | Back alignment and structure |
|
| >pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356 | Back alignment and structure |
|
| >pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318 | Back alignment and structure |
|
| >pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325 | Back alignment and structure |
|
| >pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319 | Back alignment and structure |
|
| >pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324 | Back alignment and structure |
|
| >pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327 | Back alignment and structure |
|
| >pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334 | Back alignment and structure |
|
| >pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326 | Back alignment and structure |
|
| >pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321 | Back alignment and structure |
|
| >pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491 | Back alignment and structure |
|
| >pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327 | Back alignment and structure |
|
| >pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345 | Back alignment and structure |
|
| >pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327 | Back alignment and structure |
|
| >pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319 | Back alignment and structure |
|
| >pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285 | Back alignment and structure |
|
| >pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327 | Back alignment and structure |
|
| >pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282 | Back alignment and structure |
|
| >pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267 | Back alignment and structure |
|
| >pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336 | Back alignment and structure |
|
| >pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268 | Back alignment and structure |
|
| >pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284 | Back alignment and structure |
|
| >pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268 | Back alignment and structure |
|
| >pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282 | Back alignment and structure |
|
| >pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316 | Back alignment and structure |
|
| >pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328 | Back alignment and structure |
|
| >pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327 | Back alignment and structure |
|
| >pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361 | Back alignment and structure |
|
| >pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362 | Back alignment and structure |
|
| >pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271 | Back alignment and structure |
|
| >pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275 | Back alignment and structure |
|
| >pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274 | Back alignment and structure |
|
| >pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362 | Back alignment and structure |
|
| >pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362 | Back alignment and structure |
|
| >pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327 | Back alignment and structure |
|
| >pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361 | Back alignment and structure |
|
| >pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317 | Back alignment and structure |
|
| >pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292 | Back alignment and structure |
|
| >pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299 | Back alignment and structure |
|
| >pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278 | Back alignment and structure |
|
| >pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337 | Back alignment and structure |
|
| >pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350 | Back alignment and structure |
|
| >pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350 | Back alignment and structure |
|
| >pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350 | Back alignment and structure |
|
| >pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350 | Back alignment and structure |
|
| >pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350 | Back alignment and structure |
|
| >pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371 | Back alignment and structure |
|
| >pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351 | Back alignment and structure |
|
| >pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350 | Back alignment and structure |
|
| >pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351 | Back alignment and structure |
|
| >pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350 | Back alignment and structure |
|
| >pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350 | Back alignment and structure |
|
| >pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351 | Back alignment and structure |
|
| >pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350 | Back alignment and structure |
|
| >pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351 | Back alignment and structure |
|
| >pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371 | Back alignment and structure |
|
| >pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351 | Back alignment and structure |
|
| >pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350 | Back alignment and structure |
|
| >pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350 | Back alignment and structure |
|
| >pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350 | Back alignment and structure |
|
| >pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345 | Back alignment and structure |
|
| >pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371 | Back alignment and structure |
|
| >pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350 | Back alignment and structure |
|
| >pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350 | Back alignment and structure |
|
| >pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350 | Back alignment and structure |
|
| >pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351 | Back alignment and structure |
|
| >pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350 | Back alignment and structure |
|
| >pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336 | Back alignment and structure |
|
| >pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350 | Back alignment and structure |
|
| >pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350 | Back alignment and structure |
|
| >pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351 | Back alignment and structure |
|
| >pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350 | Back alignment and structure |
|
| >pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312 | Back alignment and structure |
|
| >pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286 | Back alignment and structure |
|
| >pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351 | Back alignment and structure |
|
| >pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289 | Back alignment and structure |
|
| >pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312 | Back alignment and structure |
|
| >pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286 | Back alignment and structure |
|
| >pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310 | Back alignment and structure |
|
| >pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311 | Back alignment and structure |
|
| >pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310 | Back alignment and structure |
|
| >pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311 | Back alignment and structure |
|
| >pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316 | Back alignment and structure |
|
| >pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311 | Back alignment and structure |
|
| >pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314 | Back alignment and structure |
|
| >pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311 | Back alignment and structure |
|
| >pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286 | Back alignment and structure |
|
| >pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311 | Back alignment and structure |
|
| >pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350 | Back alignment and structure |
|
| >pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292 | Back alignment and structure |
|
| >pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351 | Back alignment and structure |
|
| >pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351 | Back alignment and structure |
|
| >pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311 | Back alignment and structure |
|
| >pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311 | Back alignment and structure |
|
| >pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350 | Back alignment and structure |
|
| >pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351 | Back alignment and structure |
|
| >pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350 | Back alignment and structure |
|
| >pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350 | Back alignment and structure |
|
| >pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301 | Back alignment and structure |
|
| >pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317 | Back alignment and structure |
|
| >pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351 | Back alignment and structure |
|
| >pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311 | Back alignment and structure |
|
| >pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318 | Back alignment and structure |
|
| >pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350 | Back alignment and structure |
|
| >pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350 | Back alignment and structure |
|
| >pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342 | Back alignment and structure |
|
| >pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315 | Back alignment and structure |
|
| >pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339 | Back alignment and structure |
|
| >pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337 | Back alignment and structure |
|
| >pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335 | Back alignment and structure |
|
| >pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336 | Back alignment and structure |
|
| >pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335 | Back alignment and structure |
|
| >pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317 | Back alignment and structure |
|
| >pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317 | Back alignment and structure |
|
| >pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317 | Back alignment and structure |
|
| >pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276 | Back alignment and structure |
|
| >pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446 | Back alignment and structure |
|
| >pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446 | Back alignment and structure |
|
| >pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276 | Back alignment and structure |
|
| >pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297 | Back alignment and structure |
|
| >pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289 | Back alignment and structure |
|
| >pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295 | Back alignment and structure |
|
| >pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278 | Back alignment and structure |
|
| >pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273 | Back alignment and structure |
|
| >pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271 | Back alignment and structure |
|
| >pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269 | Back alignment and structure |
|
| >pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323 | Back alignment and structure |
|
| >pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322 | Back alignment and structure |
|
| >pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273 | Back alignment and structure |
|
| >pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268 | Back alignment and structure |
|
| >pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269 | Back alignment and structure |
|
| >pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327 | Back alignment and structure |
|
| >pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327 | Back alignment and structure |
|
| >pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342 | Back alignment and structure |
|
| >pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341 | Back alignment and structure |
|
| >pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340 | Back alignment and structure |
|
| >pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321 | Back alignment and structure |
|
| >pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315 | Back alignment and structure |
|
| >pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355 | Back alignment and structure |
|
| >pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311 | Back alignment and structure |
|
| >pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311 | Back alignment and structure |
|
| >pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335 | Back alignment and structure |
|
| >pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294 | Back alignment and structure |
|
| >pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373 | Back alignment and structure |
|
| >pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298 | Back alignment and structure |
|
| >pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384 | Back alignment and structure |
|
| >pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364 | Back alignment and structure |
|
| >pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345 | Back alignment and structure |
|
| >pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396 | Back alignment and structure |
|
| >pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325 | Back alignment and structure |
|
| >pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304 | Back alignment and structure |
|
| >pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305 | Back alignment and structure |
|
| >pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A New Way Of Making An Old Binding Mode Length = 179 | Back alignment and structure |
|
| >pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345 | Back alignment and structure |
|
| >pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1) Length = 450 | Back alignment and structure |
|
| >pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y Length = 449 | Back alignment and structure |
|
| >pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER Length = 449 | Back alignment and structure |
|
| >pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER Length = 449 | Back alignment and structure |
|
| >pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1) Length = 449 | Back alignment and structure |
|
| >pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM COMPLEX Length = 152 | Back alignment and structure |
|
| >pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305 | Back alignment and structure |
|
| >pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360 | Back alignment and structure |
|
| >pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2 Length = 411 | Back alignment and structure |
|
| >pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16) Length = 415 | Back alignment and structure |
|
| >pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12) Length = 415 | Back alignment and structure |
|
| >pdb|2YGG|B Chain B, Complex Of Cambr And Cam Length = 150 | Back alignment and structure |
|
| >pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 150 | Back alignment and structure |
|
| >pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE Fragment Length = 149 | Back alignment and structure |
|
| >pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM COMPLEX Length = 150 | Back alignment and structure |
|
| >pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A Compact Form Length = 149 | Back alignment and structure |
|
| >pdb|1UP5|B Chain B, Chicken Calmodulin Length = 148 | Back alignment and structure |
|
| >pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide Length = 154 | Back alignment and structure |
|
| >pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement Length = 148 | Back alignment and structure |
|
| >pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms Structure Of A Calmodulin-Peptide Complex Length = 147 | Back alignment and structure |
|
| >pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1), Lp(Linker 2) Length = 448 | Back alignment and structure |
|
| >pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1), Lp(Linker 2) Length = 448 | Back alignment and structure |
|
| >pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352 | Back alignment and structure |
|
| >pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410 | Back alignment and structure |
|
| >pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2) Length = 448 | Back alignment and structure |
|
| >pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2) Length = 448 | Back alignment and structure |
|
| >pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation Mutant, Ef-delta 64 In Complex With Calmodulin Length = 149 | Back alignment and structure |
|
| >pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415 | Back alignment and structure |
|
| >pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406 | Back alignment and structure |
|
| >pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin Length = 149 | Back alignment and structure |
|
| >pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure Length = 149 | Back alignment and structure |
|
| >pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y Length = 449 | Back alignment and structure |
|
| >pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y Length = 449 | Back alignment and structure |
|
| >pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex By Multidimensional Nmr Length = 148 | Back alignment and structure |
|
| >pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle Myosin Light Chain Kinase From Combination Of Nmr And Aqueous And Contrast-matched Saxs Data Length = 148 | Back alignment and structure |
|
| >pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1) Length = 448 | Back alignment and structure |
|
| >pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1) Length = 448 | Back alignment and structure |
|
| >pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium Indicator Rcamp Length = 440 | Back alignment and structure |
|
| >pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium Indicator Rcamp Length = 440 | Back alignment and structure |
|
| >pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State ( Crystal Form 2) Length = 149 | Back alignment and structure |
|
| >pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin V Length = 145 | Back alignment and structure |
|
| >pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p Length = 148 | Back alignment and structure |
|
| >pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p Length = 148 | Back alignment and structure |
|
| >pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300 | Back alignment and structure |
|
| >pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures Length = 148 | Back alignment and structure |
|
| >pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide Length = 146 | Back alignment and structure |
|
| >pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353 | Back alignment and structure |
|
| >pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular Recognition On The Basis Of X-Ray Structures Length = 144 | Back alignment and structure |
|
| >pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX Length = 144 | Back alignment and structure |
|
| >pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320 | Back alignment and structure |
|
| >pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328 | Back alignment and structure |
|
| >pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313 | Back alignment and structure |
|
| >pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The Central Helix Length = 146 | Back alignment and structure |
|
| >pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325 | Back alignment and structure |
|
| >pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase Length = 197 | Back alignment and structure |
|
| >pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293 | Back alignment and structure |
|
| >pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound Calmodulin Length = 148 | Back alignment and structure |
|
| >pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex With Calmodulin And Pyrophosphate Length = 146 | Back alignment and structure |
|
| >pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402 | Back alignment and structure |
|
| >pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300 | Back alignment and structure |
|
| >pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of Anthrax Edema Factor (Ef) In Complex With Calmodulin Length = 144 | Back alignment and structure |
|
| >pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328 | Back alignment and structure |
|
| >pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293 | Back alignment and structure |
|
| >pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
| >pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8 Angstroms Resolution Length = 148 | Back alignment and structure |
|
| >pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314 | Back alignment and structure |
|
| >pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313 | Back alignment and structure |
|
| >pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350 | Back alignment and structure |
|
| >pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313 | Back alignment and structure |
|
| >pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312 | Back alignment and structure |
|
| >pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide Complex Length = 148 | Back alignment and structure |
|
| >pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide Complex Length = 148 | Back alignment and structure |
|
| >pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331 | Back alignment and structure |
|
| >pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308 | Back alignment and structure |
|
| >pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314 | Back alignment and structure |
|
| >pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313 | Back alignment and structure |
|
| >pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313 | Back alignment and structure |
|
| >pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4 Complexed With The Vacuolar Calcium Atpase Bca1 Peptide Length = 149 | Back alignment and structure |
|
| >pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4 Complexed With The Vacuolar Calcium Atpase Bca1 Peptide Length = 149 | Back alignment and structure |
|
| >pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w Length = 191 | Back alignment and structure |
|
| >pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory Domain (Cld) From Soybean Calcium-Dependent Protein Kinase- Alpha (Cdpk) Length = 87 | Back alignment and structure |
|
| >pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The Crystal Structure Length = 142 | Back alignment and structure |
|
| >pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide Complex Length = 145 | Back alignment and structure |
|
| >pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase Length = 149 | Back alignment and structure |
|
| >pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6 Length = 149 | Back alignment and structure |
|
| >pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273 | Back alignment and structure |
|
| >pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353 | Back alignment and structure |
|
| >pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex With Calmodulin In The Presence Of 10 Millimolar Exogenously Added Calcium Chloride Length = 149 | Back alignment and structure |
|
| >pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288 | Back alignment and structure |
|
| >pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674 | Back alignment and structure |
|
| >pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase Peptide Bound To Calmodulin Length = 148 | Back alignment and structure |
|
| >pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin Length = 148 | Back alignment and structure |
|
| >pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273 | Back alignment and structure |
|
| >pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312 | Back alignment and structure |
|
| >pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303 | Back alignment and structure |
|
| >pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290 | Back alignment and structure |
|
| >pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328 | Back alignment and structure |
|
| >pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302 | Back alignment and structure |
|
| >pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293 | Back alignment and structure |
|
| >pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576 | Back alignment and structure |
|
| >pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576 | Back alignment and structure |
|
| >pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax Cdpk, Pvx_11610 Length = 196 | Back alignment and structure |
|
| >pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388 | Back alignment and structure |
|
| >pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant) Length = 449 | Back alignment and structure |
|
| >pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp) From Human Epithelial Cells Length = 148 | Back alignment and structure |
|
| >pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329 | Back alignment and structure |
|
| >pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3, Cgd5_820 Length = 214 | Back alignment and structure |
|
| >pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314 | Back alignment and structure |
|
| >pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam Length = 176 | Back alignment and structure |
|
| >pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295 | Back alignment and structure |
|
| >pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | Back alignment and structure |
|
| >pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310 | Back alignment and structure |
|
| >pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353 | Back alignment and structure |
|
| >pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353 | Back alignment and structure |
|
| >pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437 | Back alignment and structure |
|
| >pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353 | Back alignment and structure |
|
| >pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368 | Back alignment and structure |
|
| >pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368 | Back alignment and structure |
|
| >pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358 | Back alignment and structure |
|
| >pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360 | Back alignment and structure |
|
| >pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366 | Back alignment and structure |
|
| >pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357 | Back alignment and structure |
|
| >pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364 | Back alignment and structure |
|
| >pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360 | Back alignment and structure |
|
| >pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317 | Back alignment and structure |
|
| >pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360 | Back alignment and structure |
|
| >pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360 | Back alignment and structure |
|
| >pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin Length = 169 | Back alignment and structure |
|
| >pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii Length = 191 | Back alignment and structure |
|
| >pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415 | Back alignment and structure |
|
| >pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433 | Back alignment and structure |
|
| >pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364 | Back alignment and structure |
|
| >pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320 | Back alignment and structure |
|
| >pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The C-Terminal Fragment Of Spindle Pole Body Protein Spc110 Length = 147 | Back alignment and structure |
|
| >pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394 | Back alignment and structure |
|
| >pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292 | Back alignment and structure |
|
| >pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279 | Back alignment and structure |
|
| >pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414 | Back alignment and structure |
|
| >pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420 | Back alignment and structure |
|
| >pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | Back alignment and structure |
|
| >pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348 | Back alignment and structure |
|
| >pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465 | Back alignment and structure |
|
| >pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424 | Back alignment and structure |
|
| >pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292 | Back alignment and structure |
|
| >pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430 | Back alignment and structure |
|
| >pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391 | Back alignment and structure |
|
| >pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346 | Back alignment and structure |
|
| >pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309 | Back alignment and structure |
|
| >pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371 | Back alignment and structure |
|
| >pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279 | Back alignment and structure |
|
| >pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382 | Back alignment and structure |
|
| >pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353 | Back alignment and structure |
|
| >pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279 | Back alignment and structure |
|
| >pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294 | Back alignment and structure |
|
| >pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313 | Back alignment and structure |
|
| >pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412 | Back alignment and structure |
|
| >pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311 | Back alignment and structure |
|
| >pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390 | Back alignment and structure |
|
| >pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382 | Back alignment and structure |
|
| >pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342 | Back alignment and structure |
|
| >pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX Length = 149 | Back alignment and structure |
|
| >pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390 | Back alignment and structure |
|
| >pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367 | Back alignment and structure |
|
| >pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373 | Back alignment and structure |
|
| >pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces Cerevisiae Length = 146 | Back alignment and structure |
|
| >pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378 | Back alignment and structure |
|
| >pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313 | Back alignment and structure |
|
| >pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343 | Back alignment and structure |
|
| >pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371 | Back alignment and structure |
|
| >pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352 | Back alignment and structure |
|
| >pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317 | Back alignment and structure |
|
| >pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331 | Back alignment and structure |
|
| >pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320 | Back alignment and structure |
|
| >pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364 | Back alignment and structure |
|
| >pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313 | Back alignment and structure |
|
| >pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331 | Back alignment and structure |
|
| >pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351 | Back alignment and structure |
|
| >pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350 | Back alignment and structure |
|
| >pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350 | Back alignment and structure |
|
| >pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353 | Back alignment and structure |
|
| >pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352 | Back alignment and structure |
|
| >pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350 | Back alignment and structure |
|
| >pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350 | Back alignment and structure |
|
| >pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543 | Back alignment and structure |
|
| >pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543 | Back alignment and structure |
|
| >pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543 | Back alignment and structure |
|
| >pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543 | Back alignment and structure |
|
| >pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350 | Back alignment and structure |
|
| >pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349 | Back alignment and structure |
|
| >pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356 | Back alignment and structure |
|
| >pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329 | Back alignment and structure |
|
| >pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360 | Back alignment and structure |
|
| >pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370 | Back alignment and structure |
|
| >pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360 | Back alignment and structure |
|
| >pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370 | Back alignment and structure |
|
| >pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386 | Back alignment and structure |
|
| >pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370 | Back alignment and structure |
|
| >pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371 | Back alignment and structure |
|
| >pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369 | Back alignment and structure |
|
| >pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379 | Back alignment and structure |
|
| >pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299 | Back alignment and structure |
|
| >pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299 | Back alignment and structure |
|
| >pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371 | Back alignment and structure |
|
| >pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302 | Back alignment and structure |
|
| >pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300 | Back alignment and structure |
|
| >pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306 | Back alignment and structure |
|
| >pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324 | Back alignment and structure |
|
| >pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364 | Back alignment and structure |
|
| >pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299 | Back alignment and structure |
|
| >pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365 | Back alignment and structure |
|
| >pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362 | Back alignment and structure |
|
| >pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355 | Back alignment and structure |
|
| >pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423 | Back alignment and structure |
|
| >pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364 | Back alignment and structure |
|
| >pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464 | Back alignment and structure |
|
| >pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356 | Back alignment and structure |
|
| >pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363 | Back alignment and structure |
|
| >pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356 | Back alignment and structure |
|
| >pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364 | Back alignment and structure |
|
| >pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306 | Back alignment and structure |
|
| >pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299 | Back alignment and structure |
|
| >pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289 | Back alignment and structure |
|
| >pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298 | Back alignment and structure |
|
| >pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309 | Back alignment and structure |
|
| >pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300 | Back alignment and structure |
|
| >pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356 | Back alignment and structure |
|
| >pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298 | Back alignment and structure |
|
| >pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298 | Back alignment and structure |
|
| >pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355 | Back alignment and structure |
|
| >pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300 | Back alignment and structure |
|
| >pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299 | Back alignment and structure |
|
| >pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369 | Back alignment and structure |
|
| >pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297 | Back alignment and structure |
|
| >pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298 | Back alignment and structure |
|
| >pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303 | Back alignment and structure |
|
| >pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358 | Back alignment and structure |
|
| >pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299 | Back alignment and structure |
|
| >pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296 | Back alignment and structure |
|
| >pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304 | Back alignment and structure |
|
| >pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677 | Back alignment and structure |
|
| >pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353 | Back alignment and structure |
|
| >pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348 | Back alignment and structure |
|
| >pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676 | Back alignment and structure |
|
| >pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370 | Back alignment and structure |
|
| >pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398 | Back alignment and structure |
|
| >pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301 | Back alignment and structure |
|
| >pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442 | Back alignment and structure |
|
| >pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307 | Back alignment and structure |
|
| >pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|2LMT|A Chain A, Nmr Structure Of Androcam Length = 148 | Back alignment and structure |
|
| >pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350 | Back alignment and structure |
|
| >pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294 | Back alignment and structure |
|
| >pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290 | Back alignment and structure |
|
| >pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303 | Back alignment and structure |
|
| >pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304 | Back alignment and structure |
|
| >pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360 | Back alignment and structure |
|
| >pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366 | Back alignment and structure |
|
| >pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432 | Back alignment and structure |
|
| >pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332 | Back alignment and structure |
|
| >pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332 | Back alignment and structure |
|
| >pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689 | Back alignment and structure |
|
| >pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348 | Back alignment and structure |
|
| >pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | Back alignment and structure |
|
| >pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331 | Back alignment and structure |
|
| >pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325 | Back alignment and structure |
|
| >pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301 | Back alignment and structure |
|
| >pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688 | Back alignment and structure |
|
| >pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327 | Back alignment and structure |
|
| >pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326 | Back alignment and structure |
|
| >pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294 | Back alignment and structure |
|
| >pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689 | Back alignment and structure |
|
| >pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695 | Back alignment and structure |
|
| >pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326 | Back alignment and structure |
|
| >pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327 | Back alignment and structure |
|
| >pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335 | Back alignment and structure |
|
| >pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348 | Back alignment and structure |
|
| >pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339 | Back alignment and structure |
|
| >pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360 | Back alignment and structure |
|
| >pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352 | Back alignment and structure |
|
| >pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349 | Back alignment and structure |
|
| >pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379 | Back alignment and structure |
|
| >pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380 | Back alignment and structure |
|
| >pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367 | Back alignment and structure |
|
| >pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335 | Back alignment and structure |
|
| >pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366 | Back alignment and structure |
|
| >pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336 | Back alignment and structure |
|
| >pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335 | Back alignment and structure |
|
| >pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335 | Back alignment and structure |
|
| >pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370 | Back alignment and structure |
|
| >pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372 | Back alignment and structure |
|
| >pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337 | Back alignment and structure |
|
| >pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334 | Back alignment and structure |
|
| >pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334 | Back alignment and structure |
|
| >pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365 | Back alignment and structure |
|
| >pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360 | Back alignment and structure |
|
| >pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348 | Back alignment and structure |
|
| >pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360 | Back alignment and structure |
|
| >pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367 | Back alignment and structure |
|
| >pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366 | Back alignment and structure |
|
| >pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328 | Back alignment and structure |
|
| >pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365 | Back alignment and structure |
|
| >pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359 | Back alignment and structure |
|
| >pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362 | Back alignment and structure |
|
| >pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333 | Back alignment and structure |
|
| >pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330 | Back alignment and structure |
|
| >pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331 | Back alignment and structure |
|
| >pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340 | Back alignment and structure |
|
| >pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326 | Back alignment and structure |
|
| >pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365 | Back alignment and structure |
|
| >pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362 | Back alignment and structure |
|
| >pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379 | Back alignment and structure |
|
| >pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359 | Back alignment and structure |
|
| >pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362 | Back alignment and structure |
|
| >pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389 | Back alignment and structure |
|
| >pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308 | Back alignment and structure |
|
| >pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366 | Back alignment and structure |
|
| >pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351 | Back alignment and structure |
|
| >pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350 | Back alignment and structure |
|
| >pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354 | Back alignment and structure |
|
| >pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354 | Back alignment and structure |
|
| >pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348 | Back alignment and structure |
|
| >pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|2OBH|A Chain A, Centrin-Xpc Peptide Length = 143 | Back alignment and structure |
|
| >pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam Length = 128 | Back alignment and structure |
|
| >pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam Length = 128 | Back alignment and structure |
|
| >pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299 | Back alignment and structure |
|
| >pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311 | Back alignment and structure |
|
| >pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79 Peptide Length = 155 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372 | Back alignment and structure |
|
| >pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With Pvivit Peptide Length = 156 | Back alignment and structure |
|
| >pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin B, Fkbp12 And The Immunosuppressant Drug Fk506 (tacrolimus) Length = 169 | Back alignment and structure |
|
| >pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With Cyclosporin A And Human Cyclophilin Length = 170 | Back alignment and structure |
|
| >pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311 | Back alignment and structure |
|
| >pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367 | Back alignment and structure |
|
| >pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281 | Back alignment and structure |
|
| >pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304 | Back alignment and structure |
|
| >pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281 | Back alignment and structure |
|
| >pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282 | Back alignment and structure |
|
| >pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340 | Back alignment and structure |
|
| >pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311 | Back alignment and structure |
|
| >pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417 | Back alignment and structure |
|
| >pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319 | Back alignment and structure |
|
| >pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429 | Back alignment and structure |
|
| >pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311 | Back alignment and structure |
|
| >pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429 | Back alignment and structure |
|
| >pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396 | Back alignment and structure |
|
| >pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311 | Back alignment and structure |
|
| >pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656 | Back alignment and structure |
|
| >pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+- Activated State Length = 162 | Back alignment and structure |
|
| >pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight Muscle Length = 159 | Back alignment and structure |
|
| >pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In The Two-Calcium State At 2-Angstroms Resolution Length = 162 | Back alignment and structure |
|
| >pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360 | Back alignment and structure |
|
| >pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal Muscle Troponin C Length = 162 | Back alignment and structure |
|
| >pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317 | Back alignment and structure |
|
| >pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382 | Back alignment and structure |
|
| >pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311 | Back alignment and structure |
|
| >pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303 | Back alignment and structure |
|
| >pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey Skeletal Muscle At 2.0 Angstroms Resolution Length = 162 | Back alignment and structure |
|
| >pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306 | Back alignment and structure |
|
| >pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302 | Back alignment and structure |
|
| >pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317 | Back alignment and structure |
|
| >pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299 | Back alignment and structure |
|
| >pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310 | Back alignment and structure |
|
| >pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309 | Back alignment and structure |
|
| >pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271 | Back alignment and structure |
|
| >pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656 | Back alignment and structure |
|
| >pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383 | Back alignment and structure |
|
| >pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350 | Back alignment and structure |
|
| >pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276 | Back alignment and structure |
|
| >pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360 | Back alignment and structure |
|
| >pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of Troponin I Length = 159 | Back alignment and structure |
|
| >pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341 | Back alignment and structure |
|
| >pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328 | Back alignment and structure |
|
| >pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322 | Back alignment and structure |
|
| >pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333 | Back alignment and structure |
|
| >pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336 | Back alignment and structure |
|
| >pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal Troponin C Length = 159 | Back alignment and structure |
|
| >pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448 | Back alignment and structure |
|
| >pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313 | Back alignment and structure |
|
| >pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311 | Back alignment and structure |
|
| >pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448 | Back alignment and structure |
|
| >pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334 | Back alignment and structure |
|
| >pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337 | Back alignment and structure |
|
| >pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302 | Back alignment and structure |
|
| >pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318 | Back alignment and structure |
|
| >pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373 | Back alignment and structure |
|
| >pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373 | Back alignment and structure |
|
| >pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc Length = 167 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac Troponin C Complexed With The Calcium Sensitizer Bepridil At 2.15 A Resolution Length = 161 | Back alignment and structure |
|
| >pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C In The Troponin C-Troponin I Complex Length = 161 | Back alignment and structure |
|
| >pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1 Structure Length = 161 | Back alignment and structure |
|
| >pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432 | Back alignment and structure |
|
| >pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317 | Back alignment and structure |
|
| >pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329 | Back alignment and structure |
|
| >pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353 | Back alignment and structure |
|
| >pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316 | Back alignment and structure |
|
| >pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding Protein 1 (Cabp1) Length = 153 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain Length = 145 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265 | Back alignment and structure |
|
| >pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323 | Back alignment and structure |
|
| >pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316 | Back alignment and structure |
|
| >pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain Length = 142 | Back alignment and structure |
|
| >pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein Complex Length = 172 | Back alignment and structure |
|
| >pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290 | Back alignment and structure |
|
| >pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396 Length = 287 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed With Inhibitor Pd0407824 Length = 289 | Back alignment and structure |
|
| >pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With 10z-Hymenialdisine Length = 339 | Back alignment and structure |
|
| >pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839 Length = 287 | Back alignment and structure |
|
| >pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770 Length = 285 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding Protein 1 (Cabp1) Length = 153 | Back alignment and structure |
|
| >pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin N-Terminal Domain Fragment, Residues 1-90 Length = 90 | Back alignment and structure |
|
| >pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348 | Back alignment and structure |
|
| >pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287 | Back alignment and structure |
|
| >pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382 | Back alignment and structure |
|
| >pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285 | Back alignment and structure |
|
| >pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368 | Back alignment and structure |
|
| >pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C Length = 161 | Back alignment and structure |
|
| >pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C Length = 161 | Back alignment and structure |
|
| >pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant Length = 483 | Back alignment and structure |
|
| >pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In Complex With A Novel Substituted Indole Inhibitor Length = 339 | Back alignment and structure |
|
| >pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405 | Back alignment and structure |
|
| >pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284 | Back alignment and structure |
|
| >pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An Atp Competitive Inhibitor, Ic261 Length = 298 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7 Length = 297 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286 | Back alignment and structure |
|
| >pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327 | Back alignment and structure |
|
| >pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317 | Back alignment and structure |
|
| >pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1 Length = 158 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C Length = 161 | Back alignment and structure |
|
| >pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant Of Human Cardiac Troponin C Length = 161 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319 | Back alignment and structure |
|
| >pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain Length = 360 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean Calmodulin Isoform 4 Fused With The Calmodulin-Binding Domain Of Ntmkp1 Length = 92 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex Length = 161 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313 | Back alignment and structure |
|
| >pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336 | Back alignment and structure |
|
| >pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331 | Back alignment and structure |
|
| >pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal Domain Length = 73 | Back alignment and structure |
|
| >pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella Pertussis In Presence Of C-Terminal Calmodulin And 1mm Calcium Chloride Length = 74 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin Isoform 4 C-Terminal Domain Length = 70 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin N-Terminal Domain Fragment, Residues 1-75 Length = 75 | Back alignment and structure |
|
| >pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin N-Terminal Domain Fragment, Residues 1-75 Length = 75 | Back alignment and structure |
|
| >pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino- Terminal Domain (Ce2-Tr1c), 23 Structures Length = 76 | Back alignment and structure |
|
| >pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino- Terminal Domain (Ce2-Tr1c), 23 Structures Length = 76 | Back alignment and structure |
|
| >pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound With Er Alpha Peptide Length = 80 | Back alignment and structure |
|
| >pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound With Er Alpha Peptide Length = 80 | Back alignment and structure |
|
| >pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In The Presence Of Zn2+ Length = 79 | Back alignment and structure |
|
| >pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In The Presence Of Zn2+ Length = 79 | Back alignment and structure |
|
| >pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333 | Back alignment and structure |
|
| >pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding Motif (Nscate) Peptide From The N-Terminal Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium Channel Alpha1c Subunit Length = 77 | Back alignment and structure |
|
| >pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding Motif (Nscate) Peptide From The N-Terminal Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium Channel Alpha1c Subunit Length = 77 | Back alignment and structure |
|
| >pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium Binding Protein From Entamoeba Histolytica Length = 134 | Back alignment and structure |
|
| >pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain Length = 76 | Back alignment and structure |
|
| >pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain Length = 76 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp Length = 69 | Back alignment and structure |
|
| >pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX Length = 161 | Back alignment and structure |
|
| >pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin To 1.7 A Resolution Length = 71 | Back alignment and structure |
|
| >pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain Length = 67 | Back alignment and structure |
|
| >pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate Length = 67 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 747 bits (1930), Expect = 0.0
Identities = 177/491 (36%), Positives = 261/491 (53%), Gaps = 23/491 (4%)
Query: 37 PGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFA 96
PG AT G + + Y R LG+G FG L K T Q+ A
Sbjct: 2 PGSMMDHLHATP------GMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECA 55
Query: 97 CKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELF 156
K IS R++ + D E + REVQ++ L H NI++L +ED+ L+ ++ GGELF
Sbjct: 56 VKVISKRQVKQKTDKESLLREVQLLKQL-DHPNIMKLYEFFEDKGYFYLVGEVYTGGELF 114
Query: 157 DRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216
D II++ +SE AA + RQ+++ + Y H ++HRDLKPEN L S ++D+ ++ DFG
Sbjct: 115 DEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFG 174
Query: 217 LSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQS 276
LS F+ KD +G+AYY+APEVL Y + D+WS GVILYILLSG PPF G E
Sbjct: 175 LSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYD 234
Query: 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV---DGDA 333
I + +G F W +S SAKD+++KML P R+SA + L+H W++ + +
Sbjct: 235 ILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQIS 294
Query: 334 SDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENL-SEEEIMGLKEMFKSMDTDNSGTITF 392
D P + ++QF+ KL + AL + L S++E L +F MD + G +
Sbjct: 295 VDVPSLDNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDR 354
Query: 393 EELKAGLPK-----------LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRV 441
EL G + L E EV Q+++A D D NG I+Y EF+T M +
Sbjct: 355 AELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTL 414
Query: 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEE 501
E L +AF FD DNSG I+ EL ++ +T K +++EVD +NDG ++++E
Sbjct: 415 LSRERLERAFRMFDSDNSGKISSTELATIFGVSDVDS-ETWKSVLSEVDKNNDGEVDFDE 473
Query: 502 FAAMMRKGNPD 512
F M+ K +
Sbjct: 474 FQQMLLKLCGN 484
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 744 bits (1924), Expect = 0.0
Identities = 157/498 (31%), Positives = 250/498 (50%), Gaps = 24/498 (4%)
Query: 36 PPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQF 95
+ + + G + K + +Y R+LG G +G L K+ +
Sbjct: 5 HHHSSGRENLYFQGIAINPGMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEK 64
Query: 96 ACKSISSRKLIN----------RDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145
A K I + E++ E+ ++ L H NI++L +ED+ L
Sbjct: 65 AIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL-DHPNIIKLFDVFEDKKYFYL 123
Query: 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA 205
+ + GGELF++II + + E AAN+ +Q+++ + Y H ++HRD+KPEN L +
Sbjct: 124 VTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKN 183
Query: 206 EDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSG 265
+K DFGLS FF +D +G+AYY+APEVL++ Y + D+WS GVI+YILL G
Sbjct: 184 SLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCG 243
Query: 266 VPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
PPF G+ +Q I + +G F + W NIS AK+++K ML D +R +A E LN
Sbjct: 244 YPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSR 303
Query: 326 WMR---VDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSE-EEIMGLKEMFKS 381
W++ + + SD+ L+ M++F KL + A+ I L+ EE L ++FK
Sbjct: 304 WIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAAILFIGSKLTTLEERKELTDIFKK 363
Query: 382 MDTDNSGTITFEELKAGLPKLGT--------RLSESEVRQLMEAADVDGNGTIDYIEFIT 433
+D + G + +EL G L + E EV +++ D D NG I+Y EFI+
Sbjct: 364 LDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFIS 423
Query: 434 ATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDN 493
M + EE L +AF FD D SG IT EEL + ++ + +++ E D +
Sbjct: 424 VCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGLTSISEKT-WNDVLGEADQNK 482
Query: 494 DGRINYEEFAAMMRKGNP 511
D I+++EF +MM K
Sbjct: 483 DNMIDFDEFVSMMHKICD 500
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 738 bits (1906), Expect = 0.0
Identities = 166/467 (35%), Positives = 252/467 (53%), Gaps = 22/467 (4%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
Y LG+G FG + T+Q++A K I+ N+D + REV+++
Sbjct: 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKD-TSTILREVELLK 76
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVH 182
L H NI++L ED S ++ +L GGELFD II + +SE AA + +Q+ + +
Sbjct: 77 KL-DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL 242
Y H ++HRDLKPEN L S +D +K DFGLS F+ KD +G+AYY+APEVL
Sbjct: 136 YMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL 195
Query: 243 RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302
R Y + D+WSAGVILYILLSG PPF+G+ E I + G F W IS AKD
Sbjct: 196 RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKD 255
Query: 303 IVKKMLHADPKERLSAAEVLNHPWMR----VDGDASDKPLDIAVLTRMKQFRAMNKLKKV 358
+++KML P R++A + L HPW++ SD P + +T ++QF+A KL +
Sbjct: 256 LIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQA 315
Query: 359 ALKVIAENLSE-EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL--------------G 403
AL +A L+ +E L E+F+ +DT+N G + +EL G +
Sbjct: 316 ALLYMASKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNE 375
Query: 404 TRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYIT 463
E ++ LM D+DG+G+I+Y EFI + + + E + +AF+ FDKD SG I+
Sbjct: 376 GSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKIS 435
Query: 464 MEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRKG 509
+EL + + + ++ II +VD + DG +++ EF M++
Sbjct: 436 TKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQNF 482
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 737 bits (1904), Expect = 0.0
Identities = 167/487 (34%), Positives = 262/487 (53%), Gaps = 16/487 (3%)
Query: 37 PGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFA 96
R + ++ G + + Y ++LG G +G L K T + A
Sbjct: 7 HSSGRENLYFQGDLQATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERA 66
Query: 97 CKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELF 156
K I + + + EV ++ L H NI++L +ED+ + L+M+ GGELF
Sbjct: 67 IKIIRKTSVSTSSN-SKLLEEVAVLKLL-DHPNIMKLYDFFEDKRNYYLVMECYKGGELF 124
Query: 157 DRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216
D II + ++E AA + +Q+++ V Y H ++HRDLKPEN L S +D+ +K DFG
Sbjct: 125 DEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFG 184
Query: 217 LSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQS 276
LS F+ K+ +G+AYY+APEVLR+ Y + D+WS GVIL+ILL+G PPF G+T+Q
Sbjct: 185 LSAVFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQE 244
Query: 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDAS-- 334
I + +G F S W N+S AKD++K+ML D + R+SA + L HPW++
Sbjct: 245 ILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKES 304
Query: 335 --DKPLDIAVLTRMKQFRAMNKLKKVALKVIAENL-SEEEIMGLKEMFKSMDTDNSGTIT 391
+ P + M++F+ KL + AL +A L S+EE L ++F+ +D + G +
Sbjct: 305 GIELPSLANAIENMRKFQNSQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLD 364
Query: 392 FEELKAGLPKLGT--------RLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVER 443
+EL G KL ESEV ++ AAD D NG IDY EF+T M +
Sbjct: 365 RQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLS 424
Query: 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFA 503
++ L AF+ FD+D +G I+++EL ++ KE+I+ +D +NDG +++EEF
Sbjct: 425 KDKLESAFQKFDQDGNGKISVDELASVFGLDHLESKT-WKEMISGIDSNNDGDVDFEEFC 483
Query: 504 AMMRKGN 510
M++K
Sbjct: 484 KMIQKLC 490
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444 | Back alignment and structure |
|---|
Score = 680 bits (1758), Expect = 0.0
Identities = 132/456 (28%), Positives = 211/456 (46%), Gaps = 22/456 (4%)
Query: 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
Y ELG+G F V Q++A I+++KL + D + + RE +I
Sbjct: 5 TCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL-SARDHQKLEREARI 63
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTV 180
L H NIV L + + LI DL GGELF+ I+A+ +YSE A++ +Q++
Sbjct: 64 CRLL-KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEA 122
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLVGSAYYVAP 239
V +CH MGV+HR+LKPEN L +S + + +K DFGL++ + + G+ Y++P
Sbjct: 123 VLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSP 182
Query: 240 EVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298
EVLR++ YG D+W+ GVILYILL G PPFW E + ++ I G DF S W ++
Sbjct: 183 EVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTP 242
Query: 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKV 358
AKD++ KML +P +R++AAE L HPW+ + + +K+F A KLK
Sbjct: 243 EAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGA 302
Query: 359 ALKVIAEN--LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLME 416
L V+ S + +K + ++ ++G + T++ + +
Sbjct: 303 ILTVMLATRNFSVRKQEIIKVTEQLIEAISNGDF----------ESYTKMCDPGMTAFEP 352
Query: 417 AADVDGNGTIDYIEFITATM-HMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYN 475
A + +D+ F + N + + D S I + L
Sbjct: 353 EALGNLVEGLDFHRFYFENLWSRNSKPVHTTILNPHIHLMGDESACIAYIRITQYLDAG- 411
Query: 476 MGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGNP 511
G +T + V DG+ + R G P
Sbjct: 412 -GIPRTAQSEETRVWHRRDGKW---QIVHFHRSGAP 443
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362 | Back alignment and structure |
|---|
Score = 562 bits (1451), Expect = 0.0
Identities = 113/359 (31%), Positives = 179/359 (49%), Gaps = 6/359 (1%)
Query: 40 PRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKS 99
P +S + + Y ELG+G F V HK T +FA K
Sbjct: 2 PHMASMTGGQQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKI 61
Query: 100 ISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRI 159
I+++KL RD + + RE +I L H NIV L + ++ L+ DL GGELF+ I
Sbjct: 62 INTKKLSARD-FQKLEREARICRKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI 119
Query: 160 IAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219
+A+ YSE A++ +Q++ + YCHS G++HR+LKPEN L +S A+ + +K DFGL++
Sbjct: 120 VAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 179
Query: 220 FFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIF 278
+ + G+ Y++PEVL+++ Y DIW+ GVILYILL G PPFW E + ++
Sbjct: 180 EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLY 239
Query: 279 DAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338
I G D+ S W ++ AK ++ ML +PK+R++A + L PW+ +
Sbjct: 240 AQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIH 299
Query: 339 DIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKA 397
+ +K+F A KLK L + + L + + E ++
Sbjct: 300 RQDTVDCLKKFNARRKLKGAILTTMIAT---RNLSNLGRNLLNKKEQGPPSTIKESSES 355
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351 | Back alignment and structure |
|---|
Score = 556 bits (1435), Expect = 0.0
Identities = 111/352 (31%), Positives = 181/352 (51%), Gaps = 12/352 (3%)
Query: 46 ATSATSSSVGRVLGKPMEDV--RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSR 103
+ S G +L +DV + Y +G+G F V +++T QQFA K +
Sbjct: 1 GSPGISGGGGGILDMADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVA 60
Query: 104 KLINRD--DVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA 161
K + ED++RE I H L H +IVEL Y + ++ + G +L I+
Sbjct: 61 KFTSSPGLSTEDLKREASICHML-KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVK 119
Query: 162 KGH----YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217
+ YSE A++ RQ++ + YCH ++HRD+KP L +S +P+K FG+
Sbjct: 120 RADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGV 179
Query: 218 SV-FFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQ 275
++ + G V VG+ +++APEV++R YG D+W GVIL+ILLSG PF+G T++
Sbjct: 180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKE 238
Query: 276 SIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASD 335
+F+ I++G + W +IS SAKD+V++ML DP ER++ E LNHPW++ +
Sbjct: 239 RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAY 298
Query: 336 KPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNS 387
K + ++++F A KLK L ++ + E D +
Sbjct: 299 KIHLPETVEQLRKFNARRKLKGAVLAAVSSHKFNSFYGDPPEELPDFSEDPT 350
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 531 bits (1371), Expect = 0.0
Identities = 122/340 (35%), Positives = 189/340 (55%), Gaps = 10/340 (2%)
Query: 29 PNGLKIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTH 88
L S++ +A+ + G + + + + ELGRG + Y
Sbjct: 15 TENLYFQSMSSVTASAAPGTASLVPDYWIDGSNRDALSDFFEVESELGRGATSIVYRCKQ 74
Query: 89 KDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMD 148
K T++ +A K + D + VR E+ ++ L+ H NI++LK +E ++L+++
Sbjct: 75 KGTQKPYALKVLKKTV-----DKKIVRTEIGVLLRLS-HPNIIKLKEIFETPTEISLVLE 128
Query: 149 LCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDS 208
L GGELFDRI+ KG+YSER AA+ +Q++ V Y H G++HRDLKPEN L+++ A D+
Sbjct: 129 LVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDA 188
Query: 209 PLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVP 267
PLK DFGLS + + K + G+ Y APE+LR YG E D+WS G+I YILL G
Sbjct: 189 PLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFE 248
Query: 268 PFWGET-EQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
PF+ E +Q +F IL F S W +S +AKD+V+K++ DPK+RL+ + L HPW
Sbjct: 249 PFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPW 308
Query: 327 MRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAEN 366
+ G A++ ++++F A KLK V+A +
Sbjct: 309 VT--GKAANFVHMDTAQKKLQEFNARRKLKAAVKAVVASS 346
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 526 bits (1358), Expect = 0.0
Identities = 115/329 (34%), Positives = 175/329 (53%), Gaps = 16/329 (4%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR---DDVEDVRREVQ 119
E+V + Y G ELG GQF V K T Q+A K I R+ + ED+ REV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 120 IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVT 179
I+ + H N++ L YE++ V LI++L AGGELFD + K +E A +Q++
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 180 VVHYCHSMGVMHRDLKPENFLFSS-SAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVA 238
V+Y HS+ + H DLKPEN + + +K DFGL+ G+ FK++ G+ +VA
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 239 PEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
PE++ G EAD+WS GVI YILLSG PF G+T+Q + + +F + + N S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKK 357
+ AKD ++++L DPK+R++ + L HPW++ L+R M K KK
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQ-------QALSRKASAVNMEKFKK 298
Query: 358 VALKVIAENLSEEEIMGLKEMFKSMDTDN 386
A + + N S GL ++F++ +
Sbjct: 299 FAARKKSNNGSGG---GLNDIFEAQKIEW 324
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400 | Back alignment and structure |
|---|
Score = 529 bits (1365), Expect = 0.0
Identities = 106/406 (26%), Positives = 178/406 (43%), Gaps = 23/406 (5%)
Query: 7 LPSSQTQLHSTTADPDTGPGHHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVR 66
L +SQ Q P P PP P P + K +
Sbjct: 2 LSNSQGQSPPVPFPAPAPPPQPPTPALPHPPAQPPPPPPQQFPQFHVKSGLQIKKNAIID 61
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
+ + + LG G G + +K T+++FA K + D RREV++ +
Sbjct: 62 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQ 113
Query: 127 HRNIVELKGAYED----RHSVNLIMDLCAGGELFDRIIAKGH--YSERAAANLCRQMVTV 180
+IV + YE+ R + ++M+ GGELF RI +G ++ER A+ + + +
Sbjct: 114 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 173
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE 240
+ Y HS+ + HRD+KPEN L++S ++ LK TDFG + + + YYVAPE
Sbjct: 174 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE 233
Query: 241 VL-RRNYGAEADIWSAGVILYILLSGVPPFWGE----TEQSIFDAILRGHIDFSSDPWPN 295
VL Y D+WS GVI+YILL G PPF+ + I G +F + W
Sbjct: 234 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 293
Query: 296 ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKL 355
+S K +++ +L +P +R++ E +NHPW+ PL + + + + R +
Sbjct: 294 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWEDVK 353
Query: 356 KKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPK 401
+++ + + E+I ++ K D N + + L
Sbjct: 354 EEMTSALATMRVDYEQI----KIKKIEDASNPLLLKRRKKARALEA 395
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327 | Back alignment and structure |
|---|
Score = 509 bits (1313), Expect = 0.0
Identities = 85/317 (26%), Positives = 159/317 (50%), Gaps = 6/317 (1%)
Query: 48 SATSSSVGRVLGKPMEDVRNTY-IFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI 106
S + + ME+ N Y + +ELGRG+F V K T Q++A K + R+
Sbjct: 9 SGVDLGTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRR- 67
Query: 107 NRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK--GH 164
+D ++ E+ ++ ++ L YE+ + LI++ AGGE+F + +
Sbjct: 68 GQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEM 127
Query: 165 YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224
SE L +Q++ V+Y H ++H DLKP+N L SS +K DFG+S
Sbjct: 128 VSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA 187
Query: 225 DVFKDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR 283
++++G+ Y+APE+L + D+W+ G+I Y+LL+ PF GE Q + I +
Sbjct: 188 CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQ 247
Query: 284 GHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR-VDGDASDKPLDIAV 342
++D+S + + ++S A D ++ +L +P++R +A L+H W++ D + P + +
Sbjct: 248 VNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENLFHPEETSS 307
Query: 343 LTRMKQFRAMNKLKKVA 359
++ + + K +
Sbjct: 308 SSQTQDHSVRSSEDKTS 324
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 507 bits (1309), Expect = e-180
Identities = 106/343 (30%), Positives = 169/343 (49%), Gaps = 20/343 (5%)
Query: 51 SSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDD 110
S+ + L + + Y ++G G + V HK T +FA K I K
Sbjct: 6 VHSIVQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK------ 59
Query: 111 VEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAA 170
D E++I+ H NI+ LK Y+D V ++ +L GGEL D+I+ + +SER A
Sbjct: 60 -RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREA 118
Query: 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAED-SPLKATDFGLSVFFKPGD-VFK 228
+ + + V Y H+ GV+HRDLKP N L+ + + ++ DFG + + + +
Sbjct: 119 SAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLM 178
Query: 229 DLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWG---ETEQSIFDAILRG 284
+A +VAPEVL R Y A DIWS GV+LY +L+G PF +T + I I G
Sbjct: 179 TPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSG 238
Query: 285 HIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLT 344
S W ++S +AKD+V KMLH DP +RL+AA VL HPW+ L+
Sbjct: 239 KFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQYQLNRQDAP 298
Query: 345 RMKQ------FRAMNKLKKVALKVIAENLSEEEIMGLKEMFKS 381
+ + + A+N+ + L+ + + + G+K++ +
Sbjct: 299 HLVKGAMAATYSALNRNQSPVLEPVGRSTLAQR-RGIKKITST 340
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361 | Back alignment and structure |
|---|
Score = 506 bits (1304), Expect = e-179
Identities = 110/346 (31%), Positives = 170/346 (49%), Gaps = 10/346 (2%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRD---DVEDVRREVQ 119
+ V + Y G ELG GQF + K T ++A K I R+ E++ REV
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67
Query: 120 IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVT 179
I+ + H NI+ L YE+R V LI++L +GGELFD + K SE A + +Q++
Sbjct: 68 ILRQVL-HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSP-LKATDFGLSVFFKPGDVFKDLVGSAYYVA 238
V+Y H+ + H DLKPEN + P +K DFGL+ + G FK++ G+ +VA
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 239 PEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
PE++ G EAD+WS GVI YILLSG PF G+T+Q I DF + + S
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTS 246
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG--DASDKPLDIAVLTRMKQFRAMNKL 355
AKD ++K+L + ++RL+ E L HPW+ A + + L K+ +
Sbjct: 247 ELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDTQQAMVRRESVVNLENFKKQYVRRRW 306
Query: 356 KK-VALKVIAENLSEEEIMGLK-EMFKSMDTDNSGTITFEELKAGL 399
K ++ + +L+ + + + + S T + L
Sbjct: 307 KLSFSIVSLCNHLTRSLMKKVHLRTSEDLRNCESDTEENIARRKAL 352
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 502 bits (1294), Expect = e-178
Identities = 108/280 (38%), Positives = 163/280 (58%), Gaps = 4/280 (1%)
Query: 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREV 118
G D+ Y +GRG +G + K T+ + A K I + +DV+ ++E+
Sbjct: 1 GSTKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEI 57
Query: 119 QIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
+IM L H NI+ L +ED + L+M+LC GGELF+R++ K + E AA + + ++
Sbjct: 58 EIMKSLD-HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVL 116
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVA 238
+ V YCH + V HRDLKPENFLF + + DSPLK DFGL+ FKPG + + VG+ YYV+
Sbjct: 117 SAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVS 176
Query: 239 PEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298
P+VL YG E D WSAGV++Y+LL G PPF T+ + I G F W N+S
Sbjct: 177 PQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSP 236
Query: 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338
A+ +++++L PK+R+++ + L H W +S + L
Sbjct: 237 QAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSSSPRNL 276
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321 | Back alignment and structure |
|---|
Score = 503 bits (1297), Expect = e-178
Identities = 86/318 (27%), Positives = 158/318 (49%), Gaps = 12/318 (3%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
+++ Y+ +LGRG+FG+ + +K+ + K + + D V++E+ I++
Sbjct: 1 KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG----TDQVLVKKEISILN 56
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVV 181
HRNI+ L ++E + +I + +G ++F+RI +ER + Q+ +
Sbjct: 57 IA-RHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEAL 115
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV 241
+ HS + H D++PEN ++ + S +K +FG + KPGD F+ L + Y APEV
Sbjct: 116 QFLHSHNIGHFDIRPENIIYQTR-RSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEV 174
Query: 242 LRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300
+ + D+WS G ++Y+LLSG+ PF ET Q I + I+ F + + IS A
Sbjct: 175 HQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEA 234
Query: 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVAL 360
D V ++L + K R++A+E L HPW++ + + V+ +K R + L K L
Sbjct: 235 MDFVDRLLVKERKSRMTASEALQHPWLK----QKIERVSTKVIRTLKHRRYYHTLIKKDL 290
Query: 361 KVIAENLSEEEIMGLKEM 378
++ ++
Sbjct: 291 NMVVSAARISCGGAIRSQ 308
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325 | Back alignment and structure |
|---|
Score = 500 bits (1289), Expect = e-177
Identities = 107/324 (33%), Positives = 159/324 (49%), Gaps = 25/324 (7%)
Query: 60 KPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQ 119
P + + + LG G F + HK + Q FA K IS R + ++E+
Sbjct: 4 SPFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRME------ANTQKEIT 57
Query: 120 IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVT 179
+ GH NIV+L + D+ L+M+L GGELF+RI K H+SE A+ + R++V+
Sbjct: 58 ALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVS 117
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-GDVFKDLVGSAYYVA 238
V + H +GV+HRDLKPEN LF+ ++ +K DFG + P K + +Y A
Sbjct: 118 AVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAA 177
Query: 239 PEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQS-------IFDAILRGHIDFSS 290
PE+L +N Y D+WS GVILY +LSG PF I I +G F
Sbjct: 178 PELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEG 237
Query: 291 DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL---------DIA 341
+ W N+S AKD+++ +L DP +RL + + + W++ S PL A
Sbjct: 238 EAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLMTPDILGSSGAA 297
Query: 342 VLTRMK-QFRAMNKLKKVALKVIA 364
V T +K F A NK K+ +
Sbjct: 298 VHTCVKATFHAFNKYKREGFCLQN 321
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 489 bits (1262), Expect = e-173
Identities = 109/266 (40%), Positives = 153/266 (57%), Gaps = 2/266 (0%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
Y LG+G FG + T+Q++A K I+ N+D + REV+++
Sbjct: 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKD-TSTILREVELLK 76
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVH 182
L H NI++L ED S ++ +L GGELFD II + +SE AA + +Q+ + +
Sbjct: 77 KLD-HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL 242
Y H ++HRDLKPEN L S +D +K DFGLS F+ KD +G+AYY+APEVL
Sbjct: 136 YMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL 195
Query: 243 RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302
R Y + D+WSAGVILYILLSG PPF+G+ E I + G F W IS AKD
Sbjct: 196 RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKD 255
Query: 303 IVKKMLHADPKERLSAAEVLNHPWMR 328
+++KML P R++A + L HPW++
Sbjct: 256 LIRKMLTFHPSLRITATQCLEHPWIQ 281
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321 | Back alignment and structure |
|---|
Score = 489 bits (1262), Expect = e-173
Identities = 104/309 (33%), Positives = 162/309 (52%), Gaps = 9/309 (2%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR---DDVEDVRREVQ 119
+ V + Y G ELG GQF + K T ++A K I R+ E++ REV
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 120 IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVT 179
I+ + H N++ L YE+R V LI++L +GGELFD + K SE A + +Q++
Sbjct: 68 ILRQVL-HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSP-LKATDFGLSVFFKPGDVFKDLVGSAYYVA 238
V+Y H+ + H DLKPEN + P +K DFGL+ + G FK++ G+ +VA
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 239 PEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
PE++ G EAD+WS GVI YILLSG PF G+T+Q I DF + + + S
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTS 246
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMR--VDGDASDKPLDIAVLTRMKQFRAMNKL 355
AKD ++K+L + ++RL+ E L HPW+ + A + + L ++ +
Sbjct: 247 ELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQYVRRRW 306
Query: 356 KKVALKVIA 364
K + +++
Sbjct: 307 KL-SFSIVS 314
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 491 bits (1266), Expect = e-173
Identities = 97/331 (29%), Positives = 157/331 (47%), Gaps = 15/331 (4%)
Query: 9 SSQTQLHSTTADPDTGPGHHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNT 68
+ + S DP K++ P + + ++
Sbjct: 36 QRRAFIRSLRDDPSQSANLLAEAKKLNDAQPKGTENLYFQSMGPEDELPDWAAAKEFYQK 95
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN-----RDDVEDVRREVQIMHH 123
Y +GRG V H+ T +FA K + + E RRE I+
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHY 183
+ GH +I+ L +YE + L+ DL GELFD + K SE+ ++ R ++ V +
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSF 215
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR 243
H+ ++HRDLKPEN L ++ ++ +DFG S +PG+ ++L G+ Y+APE+L+
Sbjct: 216 LHANNIVHRDLKPENILL---DDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILK 272
Query: 244 -------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296
YG E D+W+ GVIL+ LL+G PPFW + + I+ G FSS W +
Sbjct: 273 CSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDR 332
Query: 297 SSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
SS+ KD++ ++L DP+ RL+A + L HP+
Sbjct: 333 SSTVKDLISRLLQVDPEARLTAEQALQHPFF 363
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284 | Back alignment and structure |
|---|
Score = 487 bits (1255), Expect = e-172
Identities = 102/275 (37%), Positives = 157/275 (57%), Gaps = 3/275 (1%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
+ Y ELG+G F V HK T +FA K I+++KL RD + + RE +I
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICR 60
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVH 182
L H NIV L + ++ L+ DL GGELF+ I+A+ YSE A++ +Q++ +
Sbjct: 61 KLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA 119
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL 242
YCHS G++HR+LKPEN L +S A+ + +K DFGL++ + + G+ Y++PEVL
Sbjct: 120 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVL 179
Query: 243 RRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
+++ Y DIW+ GVILYILL G PPFW E + ++ I G D+ S W ++ AK
Sbjct: 180 KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK 239
Query: 302 DIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDK 336
++ ML +PK+R++A + L PW+ +
Sbjct: 240 SLIDSMLTVNPKKRITADQALKVPWICNRERVASA 274
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283 | Back alignment and structure |
|---|
Score = 480 bits (1239), Expect = e-170
Identities = 103/283 (36%), Positives = 157/283 (55%), Gaps = 6/283 (2%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRD---DVEDVRREVQI 120
V + Y G ELG GQF + K T +++A K I R+L + E++ REV I
Sbjct: 2 MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 61
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTV 180
+ + H NI+ L +E++ V LI++L +GGELFD + K +E A +Q++
Sbjct: 62 LREIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDG 120
Query: 181 VHYCHSMGVMHRDLKPENFLFSS-SAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAP 239
VHY HS + H DLKPEN + + + +K DFG++ + G+ FK++ G+ +VAP
Sbjct: 121 VHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAP 180
Query: 240 EVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298
E++ G EAD+WS GVI YILLSG PF GET+Q I + DF + + N S
Sbjct: 181 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSE 240
Query: 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIA 341
AKD ++++L DPK R++ A+ L H W++ + + D
Sbjct: 241 LAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRNVRGEDSG 283
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322 | Back alignment and structure |
|---|
Score = 479 bits (1235), Expect = e-169
Identities = 106/319 (33%), Positives = 154/319 (48%), Gaps = 18/319 (5%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI-----NRDDVEDVRRE 117
+ +R+ YI + LG G G L + T ++ A K IS RK D +V E
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQM 177
++I+ L H I+++K ++ ++++L GGELFD+++ E QM
Sbjct: 66 IEILKKL-NHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV 237
+ V Y H G++HRDLKPEN L SS ED +K TDFG S + + L G+ Y+
Sbjct: 124 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYL 183
Query: 238 APEVL----RRNYGAEADIWSAGVILYILLSGVPPFWGE-TEQSIFDAILRGHIDFSSDP 292
APEVL Y D WS GVIL+I LSG PPF T+ S+ D I G +F +
Sbjct: 184 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV 243
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAM 352
W +S A D+VKK+L DPK R + E L HPW++ D+ + + +
Sbjct: 244 WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ------DEDMKRKFQDLLSEENES 297
Query: 353 NKLKKVALKVIAENLSEEE 371
L +V + E
Sbjct: 298 TALPQVLAQPSTSRKRPRE 316
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387 | Back alignment and structure |
|---|
Score = 481 bits (1240), Expect = e-168
Identities = 100/369 (27%), Positives = 167/369 (45%), Gaps = 28/369 (7%)
Query: 27 HHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLV 86
K D P V + + V + Y ELG G FGV +
Sbjct: 11 GSKVRGKYDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRC 70
Query: 87 THKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146
K T + F K I++ + D V+ E+ IM+ L H ++ L A+ED++ + LI
Sbjct: 71 VEKATGRVFVAKFINTPYPL---DKYTVKNEISIMNQLH-HPKLINLHDAFEDKYEMVLI 126
Query: 147 MDLCAGGELFDRIIAKGH-YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA 205
++ +GGELFDRI A+ + SE N RQ + + H ++H D+KPEN + +
Sbjct: 127 LEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETK- 185
Query: 206 EDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLS 264
+ S +K DFGL+ P ++ K +A + APE++ R G D+W+ GV+ Y+LLS
Sbjct: 186 KASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLS 245
Query: 265 GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324
G+ PF GE + + R +F D + ++S AKD +K +L +P++RL+ + L H
Sbjct: 246 GLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305
Query: 325 PWMRVDGDASDKPLD---------------------IAVLTRMKQFRAMNKLKKVALKVI 363
PW++ D + + R+ F ++ K + ++
Sbjct: 306 PWLKGDHSNLTSRIPSSRYNKIRQKIKEKYADWPAPQPAIGRIANFSSLRKHRPQEYQIY 365
Query: 364 AENLSEEEI 372
+E
Sbjct: 366 DSYFDRKEA 374
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 476 bits (1228), Expect = e-168
Identities = 98/280 (35%), Positives = 163/280 (58%), Gaps = 8/280 (2%)
Query: 53 SVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVE 112
S GR + + +IF R+LG G FG +LV + + + K+I+ + + +E
Sbjct: 8 SSGRENLYFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS--QVPME 65
Query: 113 DVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK----GHYSER 168
+ E++++ L H NI+++ +ED H++ ++M+ C GGEL +RI++ SE
Sbjct: 66 QIEAEIEVLKSL-DHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEG 124
Query: 169 AAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFK 228
A L +QM+ + Y HS V+H+DLKPEN LF ++ SP+K DFGL+ FK +
Sbjct: 125 YVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHST 184
Query: 229 DLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDF 288
+ G+A Y+APEV +R+ + DIWSAGV++Y LL+G PF G + + + ++
Sbjct: 185 NAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNY 244
Query: 289 SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ + P ++ A D++K+ML DP+ R SAA+VL+H W +
Sbjct: 245 AVECRP-LTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFK 283
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 476 bits (1228), Expect = e-168
Identities = 95/292 (32%), Positives = 144/292 (49%), Gaps = 16/292 (5%)
Query: 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN------RDDVE 112
Y LGRG V HK T +++A K I + ++ E
Sbjct: 9 SHSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELRE 68
Query: 113 DVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAAN 172
+EV I+ ++GH NI++LK YE L+ DL GELFD + K SE+
Sbjct: 69 ATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRK 128
Query: 173 LCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVG 232
+ R ++ V+ H + ++HRDLKPEN L +D +K TDFG S PG+ +++ G
Sbjct: 129 IMRALLEVICALHKLNIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLREVCG 185
Query: 233 SAYYVAPEVLR-------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH 285
+ Y+APE++ YG E D+WS GVI+Y LL+G PPFW + + I+ G+
Sbjct: 186 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGN 245
Query: 286 IDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKP 337
F S W + S + KD+V + L P++R +A E L HP+ + +
Sbjct: 246 YQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVVEEVRH 297
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 487 bits (1254), Expect = e-168
Identities = 110/413 (26%), Positives = 170/413 (41%), Gaps = 18/413 (4%)
Query: 8 PSSQTQLHSTTADPDTGPGHHPNGLKIDPPGPPRPSSSATSATSSSVG-----RVLGKPM 62
P T D + + SS + + +
Sbjct: 93 PCEPTAPVLIPGDERKRRRGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKH 152
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
+ V + Y ELG G FGV + VT + T FA K + + D E VR+E+Q M
Sbjct: 153 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE---SDKETVRKEIQTMS 209
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVV 181
L H +V L A+ED + + +I + +GGELF+++ + SE A RQ+ +
Sbjct: 210 VLR-HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGL 268
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV 241
+ H +H DLKPEN +F++ + LK DFGL+ P K G+A + APEV
Sbjct: 269 CHMHENNYVHLDLKPENIMFTTKRSNE-LKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEV 327
Query: 242 LR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300
+ G D+WS GV+ YILLSG+ PF GE + + + + IS
Sbjct: 328 AEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDG 387
Query: 301 KDIVKKMLHADPKERLSAAEVLNHPWMRV-DGDASDKPLDIAVLTRMKQFRAMNKLKKVA 359
KD ++K+L ADP R++ + L HPW+ + D + + R + R K K
Sbjct: 388 KDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSS---RYTKIRDSIKTKY-- 442
Query: 360 LKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVR 412
I + K + S F + P+ + +EV
Sbjct: 443 DAWPEPLPPLGRISNYSSLRKHRPQEYSIRDAFWDRSEAQPRFIVKPYGTEVG 495
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316 | Back alignment and structure |
|---|
Score = 473 bits (1219), Expect = e-166
Identities = 101/313 (32%), Positives = 151/313 (48%), Gaps = 36/313 (11%)
Query: 64 DVRNTYIFGRE-LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
+ Y + LG G + T Q++A K I + V REV++++
Sbjct: 9 RFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG---HIRSRVFREVEMLY 65
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVH 182
GHRN++EL +E+ L+ + GG + I + H++E A+ + + + + +
Sbjct: 66 QCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALD 125
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL--------VGSA 234
+ H+ G+ HRDLKPEN L + SP+K DF L K + GSA
Sbjct: 126 FLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSA 185
Query: 235 YYVAPEVLR------RNYGAEADIWSAGVILYILLSGVPPFWGE---------------T 273
Y+APEV+ Y D+WS GVILYILLSG PPF G
Sbjct: 186 EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPAC 245
Query: 274 EQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDA 333
+ +F++I G +F W +IS +AKD++ K+L D K+RLSAA+VL HPW++ G A
Sbjct: 246 QNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ--GCA 303
Query: 334 SDKPLDIA-VLTR 345
+ L VL R
Sbjct: 304 PENTLPTPMVLQR 316
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336 | Back alignment and structure |
|---|
Score = 472 bits (1216), Expect = e-166
Identities = 106/339 (31%), Positives = 162/339 (47%), Gaps = 25/339 (7%)
Query: 48 SATSSSVGRVLGKPMEDVRNTYIFGRE-LGRGQFGVTYLVTHKDTKQQFACKSISSRKLI 106
S+ + + V + Y ++ LG G G H+ T Q+ A K +
Sbjct: 9 SSGLEVLFQGPEPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLL------ 62
Query: 107 NRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH----SVNLIMDLCAGGELFDRIIAK 162
D R+EV +G +IV + YE+ H + +IM+ GGELF RI +
Sbjct: 63 --YDSPKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQER 120
Query: 163 GH--YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220
G ++ER AA + R + T + + HS + HRD+KPEN L++S +D+ LK TDFG +
Sbjct: 121 GDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE 180
Query: 221 FKPGDVFKDLVGSAYYVAPEVL-RRNYGAEADIWSAGVILYILLSGVPPFWGETEQ---- 275
+ + YYVAPEVL Y D+WS GVI+YILL G PPF+ T Q
Sbjct: 181 TTQN-ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP 239
Query: 276 SIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASD 335
+ I G F + W +S AK +++ +L DP ERL+ + +NHPW+
Sbjct: 240 GMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQ 299
Query: 336 KPLDIA-VLTRMKQFRAMNKLKKVALKVIAEN-LSEEEI 372
PL A VL K +++K+ +A + +++
Sbjct: 300 TPLHTARVLQEDKDH--WDEVKEEMTSALATMRVDYDQV 336
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373 | Back alignment and structure |
|---|
Score = 461 bits (1189), Expect = e-161
Identities = 103/356 (28%), Positives = 173/356 (48%), Gaps = 25/356 (7%)
Query: 8 PSSQTQLHSTTADPDTGPGHHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRN 67
+ + ++ + + L +D P PP P R++ V +
Sbjct: 38 EAKEVWSNADLTERMPVKSKRTSALAVDIPAPPAPFDH----------RIVTAKQGAVNS 87
Query: 68 TYIFGR--ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
Y + LG G+FG + T + A K I +R + D E+V+ E+ +M+ L
Sbjct: 88 FYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM---KDKEEVKNEISVMNQL- 143
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH-YSERAAANLCRQMVTVVHYC 184
H N+++L A+E ++ + L+M+ GGELFDRII + + +E +Q+ + +
Sbjct: 144 DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHM 203
Query: 185 HSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR 244
H M ++H DLKPEN L + + +K DFGL+ +KP + K G+ ++APEV+
Sbjct: 204 HQMYILHLDLKPENILCVNR-DAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNY 262
Query: 245 N-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303
+ D+WS GVI Y+LLSG+ PF G+ + + IL D + + +IS AK+
Sbjct: 263 DFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEF 322
Query: 304 VKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVA 359
+ K+L + R+SA+E L HPW+ SD L + + K+ R + V
Sbjct: 323 ISKLLIKEKSWRISASEALKHPWL------SDHKLHSRLSAQKKKNRGSDAQDFVT 372
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299 | Back alignment and structure |
|---|
Score = 457 bits (1177), Expect = e-160
Identities = 86/315 (27%), Positives = 145/315 (46%), Gaps = 39/315 (12%)
Query: 60 KPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQ 119
K + + + + LG G G + +K T+++FA K + D RREV+
Sbjct: 11 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVE 62
Query: 120 IMHHLTGHRNIVELKGAYED----RHSVNLIMDLCAGGELFDRIIAKGH--YSERAAANL 173
+ + +IV + YE+ R + ++M+ GGELF RI +G ++ER A+ +
Sbjct: 63 LHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEI 122
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
+ + + Y HS+ + HRD+KPEN L++S ++ LK TDFG
Sbjct: 123 MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF---------------- 166
Query: 234 AYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGE----TEQSIFDAILRGHIDFS 289
A E Y D+WS GVI+YILL G PPF+ + I G +F
Sbjct: 167 ----AKETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFP 222
Query: 290 SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQF 349
+ W +S K +++ +L +P +R++ E +NHPW+ PL + + + +
Sbjct: 223 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKE 282
Query: 350 RAMNKLKKVALKVIA 364
R +K+ +A
Sbjct: 283 R-WEDVKEEMTSALA 296
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419 | Back alignment and structure |
|---|
Score = 439 bits (1130), Expect = e-151
Identities = 105/288 (36%), Positives = 149/288 (51%), Gaps = 13/288 (4%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR-----DDVEDVRRE 117
+ +R+ YI + LG G G L + T ++ A + IS RK D +V E
Sbjct: 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETE 190
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQM 177
++I+ L H I+++K ++ ++++L GGELFD+++ E QM
Sbjct: 191 IEILKKLN-HPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 248
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV 237
+ V Y H G++HRDLKPEN L SS ED +K TDFG S + + L G+ Y+
Sbjct: 249 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYL 308
Query: 238 APEVL----RRNYGAEADIWSAGVILYILLSGVPPFWGE-TEQSIFDAILRGHIDFSSDP 292
APEVL Y D WS GVIL+I LSG PPF T+ S+ D I G +F +
Sbjct: 309 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV 368
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDI 340
W +S A D+VKK+L DPK R + E L HPW++ D D K D+
Sbjct: 369 WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ-DEDMKRKFQDL 415
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345 | Back alignment and structure |
|---|
Score = 434 bits (1117), Expect = e-151
Identities = 98/339 (28%), Positives = 155/339 (45%), Gaps = 52/339 (15%)
Query: 48 SATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKL-- 105
++ G + +++ Y +G+G +GV + T+ A K ++ K+
Sbjct: 7 HSSGRENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQ 66
Query: 106 INRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH- 164
IN DVE ++ EV++M L H NI L YED + L+M+LC GG L D++
Sbjct: 67 INPKDVERIKTEVRLMKKLH-HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDD 125
Query: 165 ---------------------------------------YSERAAANLCRQMVTVVHYCH 185
E+ +N+ RQ+ + +HY H
Sbjct: 126 STGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH 185
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD-----VFKDLVGSAYYVAPE 240
+ G+ HRD+KPENFLFS++ + +K DFGLS F + G+ Y+VAPE
Sbjct: 186 NQGICHRDIKPENFLFSTN-KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPE 244
Query: 241 VLR---RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
VL +YG + D WSAGV+L++LL G PF G + +L + F + + +S
Sbjct: 245 VLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLS 304
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDK 336
A+D++ +L+ + ER A L HPW+ D K
Sbjct: 305 PLARDLLSNLLNRNVDERFDAMRALQHPWISQFSDKIYK 343
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 331 bits (851), Expect = e-109
Identities = 87/447 (19%), Positives = 159/447 (35%), Gaps = 38/447 (8%)
Query: 41 RPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSI 100
PS + ++GK ++ LG G G + A K I
Sbjct: 4 SPSLEQDDGDEETSVVIVGK------ISFCPKDVLGHGAEGTIVYR-GMFDNRDVAVKRI 56
Query: 101 SSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRII 160
+ REVQ++ H N++ +DR + ++LC L + +
Sbjct: 57 ------LPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC-AATLQEYVE 109
Query: 161 AKGH-YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKA--TDFGL 217
K + L +Q + + + HS+ ++HRDLKP N L S +KA +DFGL
Sbjct: 110 QKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGL 169
Query: 218 SVFFKPGD----VFKDLVGSAYYVAPEVLR----RNYGAEADIWSAGVILYILLS-GVPP 268
G + G+ ++APE+L N DI+SAG + Y ++S G P
Sbjct: 170 CKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHP 229
Query: 269 FWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
F ++ + +D P + A+++++KM+ DP++R SA VL HP+
Sbjct: 230 FGKSLQRQANILLGACSLDCLH-PEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFW 288
Query: 329 VDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSG 388
V R+++ + K + + + + ++ D
Sbjct: 289 --SLEKQLQFFQDVSDRIEKESLDGPIVKQLERGGRAVVKMDWRENITVPLQT-DLRKFR 345
Query: 389 TITFEELKAGLPKL--GTRLSESEVRQLMEAADVDGNGTIDYIE--FITATMHMNRVER- 443
T ++ L + ++ E + + Y F H R
Sbjct: 346 TYKGGSVRDLLRAMRNKKHHYRELPAEVRETLGTLPDDFVCYFTSRFPHLLAHTYRAMEL 405
Query: 444 ---EEHLYKAFEYFDKDNSGYITMEEL 467
E + + + +T + L
Sbjct: 406 CSHERLFQPYYFHEPPEPQPPVTPDAL 432
|
| >3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} Length = 197 | Back alignment and structure |
|---|
Score = 314 bits (808), Expect = e-106
Identities = 60/193 (31%), Positives = 108/193 (55%), Gaps = 4/193 (2%)
Query: 320 EVLNHPWMRVD-GDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEM 378
+H R + L +L +K F+ N+LKK+AL +IA++L + EI L+ +
Sbjct: 3 HHHHHSSGRENLYFQGHVELSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNI 62
Query: 379 FKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM 438
F ++D DNSGT++ +E+ GL K+G + ++ Q++ D + +G I Y +F+ AT+
Sbjct: 63 FIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDK 122
Query: 439 NRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---IKEIIAEVDIDNDG 495
++E F++FD D +G I++EEL+ + ++ + I ++ EVD++ DG
Sbjct: 123 QTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDG 182
Query: 496 RINYEEFAAMMRK 508
I++ EF MM K
Sbjct: 183 EIDFHEFMLMMSK 195
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 318 bits (817), Expect = e-104
Identities = 75/342 (21%), Positives = 135/342 (39%), Gaps = 48/342 (14%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
+ ++N + + LG G G + A K + D + E++++
Sbjct: 11 QSLKNLVVSEKILGYGSSGTVVF-QGSFQGRPVAVKRM------LIDFCDIALMEIKLLT 63
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERA-------AANLCR 175
H N++ + + + ++LC L D + +K E +L R
Sbjct: 64 ESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLR 122
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFLFSSS----------AEDSPLKATDFGLSVFFKPGD 225
Q+ + V + HS+ ++HRDLKP+N L S+S AE+ + +DFGL G
Sbjct: 123 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 182
Query: 226 V-----FKDLVGSAYYVAPEVLR--------RNYGAEADIWSAGVILYILLS-GVPPFWG 271
+ G++ + APE+L R DI+S G + Y +LS G PF
Sbjct: 183 SSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 242
Query: 272 ETEQSIFDAILRGHIDFS---SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ + I+RG ++ + A D++ +M+ DP +R +A +VL HP
Sbjct: 243 KYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFW 300
Query: 329 VDGDASDKPLDIA----VLTRMKQFRAMNKLKKVALKVIAEN 366
+ L ++ + R + K + VI
Sbjct: 301 PKSKKLEFLLKVSDRLEIENRDPPSALLMKFDAGSDFVIPSG 342
|
| >3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A Length = 191 | Back alignment and structure |
|---|
Score = 294 bits (755), Expect = 2e-98
Identities = 67/192 (34%), Positives = 102/192 (53%), Gaps = 8/192 (4%)
Query: 322 LNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKS 381
++H G + I VL K + + K +K+A+ +IA+ ++ ++ LK F
Sbjct: 1 MHHHHHHSSGRENLYFQGIHVLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLV 60
Query: 382 MDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRV 441
+D D G IT E+LK GL K G +L L++ D DG+G IDY EFI A + ++
Sbjct: 61 LDEDGKGYITKEQLKKGLEKDGLKLPY-NFDLLLDQIDSDGSGKIDYTEFIAAALDRKQL 119
Query: 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG------DAKTIKEIIAEVDIDNDG 495
++ +Y AF FD DN G IT EL H L N D +K +I +VD +NDG
Sbjct: 120 S-KKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDG 178
Query: 496 RINYEEFAAMMR 507
+I++ EF+ MM+
Sbjct: 179 KIDFHEFSEMMK 190
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 286 bits (735), Expect = 2e-93
Identities = 93/309 (30%), Positives = 143/309 (46%), Gaps = 13/309 (4%)
Query: 24 GPGHHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVT 83
GP + K PG P + A + + + VL P R Y+ GR LG+G F
Sbjct: 1 GP-APADPGKAGVPGVAAPGAPAAAPPAKEIPEVLVDPRS--RRRYVRGRFLGKGGFAKC 57
Query: 84 YLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143
+ ++ DTK+ FA K + L+ E + E+ I L H+++V G +ED V
Sbjct: 58 FEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFHGFFEDNDFV 116
Query: 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSS 203
++++LC L + + +E A RQ+V Y H V+HRDLK N +
Sbjct: 117 FVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE 176
Query: 204 SAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEVLRRN-YGAEADIWSAGVILYI 261
E +K DFGL+ + K L G+ Y+APEVL + + E D+WS G I+Y
Sbjct: 177 DLE---VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYT 233
Query: 262 LLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEV 321
LL G PPF + + I + ++S I+ A +++KML DP R + E+
Sbjct: 234 LLVGKPPFETSCLKETYLRIKKN--EYSIPKH--INPVAASLIQKMLQTDPTARPTINEL 289
Query: 322 LNHPWMRVD 330
LN +
Sbjct: 290 LNDEFFTSG 298
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 285 bits (731), Expect = 3e-93
Identities = 73/295 (24%), Positives = 123/295 (41%), Gaps = 41/295 (13%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
+ + LG+G FG + + +A K I + + + + EV ++ L
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE----EKLSTILSEVMLLASLN 60
Query: 126 GHRNIVELKGAYEDRHSVN-------------LIMDLCAGGELFDRIIAKGHYSER-AAA 171
H+ +V A+ +R + + M+ C G L+D I ++ +R
Sbjct: 61 -HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW 119
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK--------- 222
L RQ++ + Y HS G++HRDLKP N E +K DFGL+
Sbjct: 120 RLFRQILEALSYIHSQGIIHRDLKPMNIFID---ESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 223 ------PGDVFKDLVGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETE 274
D +G+A YVA EVL +Y + D++S G+I + ++ P G
Sbjct: 177 SQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY--PFSTGMER 234
Query: 275 QSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329
+I + I+F D N K I++ ++ DP +R A +LN W+ V
Sbjct: 235 VNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPV 289
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 284 bits (728), Expect = 1e-92
Identities = 68/299 (22%), Positives = 119/299 (39%), Gaps = 43/299 (14%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
++ LG+G + HK T FA K ++ V+ RE +++ L H+
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF--LRPVDVQMREFEVLKKLN-HK 67
Query: 129 NIVELKGAYEDRHSVN--LIMDLCAGGELFDRIIAKGH---YSERAAANLCRQMVTVVHY 183
NIV+L E+ + + LIM+ C G L+ + + E + R +V +++
Sbjct: 68 NIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNH 127
Query: 184 CHSMGVMHRDLKPENFLFSSSA-EDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL 242
G++HR++KP N + S K TDFG + + + F L G+ Y+ P++
Sbjct: 128 LRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMY 187
Query: 243 RR---------NYGAEADIWSAGVILYILLSGVPPFW----GETEQSIFDAILRG----- 284
R YGA D+WS GV Y +G PF + + I+ G
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGA 247
Query: 285 ----------HIDFSSD--PWPNISSSAKDIVK----KMLHADPKERLSAAEVLNHPWM 327
ID+S D ++S + ++ +L AD ++ +
Sbjct: 248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD 306
|
| >2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} Length = 166 | Back alignment and structure |
|---|
Score = 276 bits (708), Expect = 1e-91
Identities = 104/164 (63%), Positives = 132/164 (80%), Gaps = 1/164 (0%)
Query: 347 KQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRL 406
KQF AMNK KK+AL+VIAE+LSEEEI GLKEMF +D D SG ITFEELKAGL ++G L
Sbjct: 1 KQFSAMNKFKKMALRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANL 60
Query: 407 SESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEE 466
ESE+ LM+AADVD +GTIDY EFI AT+H+N++ERE+HL+ AF YFDKD SGYIT +E
Sbjct: 61 KESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDE 120
Query: 467 LEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGN 510
L+ A +++ + D I+E++ +VD DNDGRI+Y EF AMM+KG+
Sbjct: 121 LQQACEEFGVED-VRIEELMRDVDQDNDGRIDYNEFVAMMQKGS 163
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 279 bits (715), Expect = 6e-91
Identities = 82/264 (31%), Positives = 126/264 (47%), Gaps = 10/264 (3%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y+ GR LG+G F + ++ DTK+ FA K + L+ E + E+ I L H+
Sbjct: 17 YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQ 75
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
++V G +ED V ++++LC L + + +E A RQ+V Y H
Sbjct: 76 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR 135
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEVLRRN-Y 246
V+HRDLK N + E +K DFGL+ + K L G+ Y+APEVL + +
Sbjct: 136 VIHRDLKLGNLFLNEDLE---VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGH 192
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
E D+WS G I+Y LL G PPF + + I + P +I+ A +++K
Sbjct: 193 SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI---P-KHINPVAASLIQK 248
Query: 307 MLHADPKERLSAAEVLNHPWMRVD 330
ML DP R + E+LN +
Sbjct: 249 MLQTDPTARPTINELLNDEFFTSG 272
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 277 bits (712), Expect = 1e-90
Identities = 84/283 (29%), Positives = 145/283 (51%), Gaps = 19/283 (6%)
Query: 49 ATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR 108
+ ++ +G + + G LG+G F Y T + A K I + +
Sbjct: 1 SLATCIGEKIED--------FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKA 52
Query: 109 DDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSE 167
V+ V+ EV+I L H +I+EL +ED + V L++++C GE+ + + +SE
Sbjct: 53 GMVQRVQNEVKIHCQLK-HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSE 111
Query: 168 RAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF 227
A + Q++T + Y HS G++HRDL N L + + +K DFGL+ K
Sbjct: 112 NEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMN---IKIADFGLATQLKMPHEK 168
Query: 228 KD-LVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH 285
L G+ Y++PE+ R+ +G E+D+WS G + Y LL G PPF +T ++ + ++
Sbjct: 169 HYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLAD 228
Query: 286 IDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ P +S AKD++ ++L +P +RLS + VL+HP+M
Sbjct: 229 YEM---P-SFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMS 267
|
| >3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} Length = 191 | Back alignment and structure |
|---|
Score = 273 bits (699), Expect = 5e-90
Identities = 60/186 (32%), Positives = 94/186 (50%), Gaps = 13/186 (6%)
Query: 336 KPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSE-EEIMGLKEMFKSMDTDNSGTITFEE 394
K L MK+F++ KL + A+ + L+ EE L ++F+ +D + G + +E
Sbjct: 2 KHALTGALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKE 61
Query: 395 LKAGLPK-----------LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVER 443
L G K L + E+EV ++++ D D NG I+Y EF+T M +
Sbjct: 62 LIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLS 121
Query: 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFA 503
E L AF+ FD D SG IT EEL + D +T +++ E D +NDG +++EEF
Sbjct: 122 RERLLAAFQQFDSDGSGKITNEELGRLFGVTEVDD-ETWHQVLQECDKNNDGEVDFEEFV 180
Query: 504 AMMRKG 509
MM+K
Sbjct: 181 EMMQKI 186
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 274 bits (702), Expect = 4e-89
Identities = 86/272 (31%), Positives = 137/272 (50%), Gaps = 10/272 (3%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ GR LG+G+FG YL K K A K + +L +RRE++I HL H
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HP 74
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
NI+ + + DR + L+++ GEL+ + G + E+ +A ++ +HYCH
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 134
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL-RRNYG 247
V+HRD+KPEN L E LK DFG SV P + + G+ Y+ PE++ + +
Sbjct: 135 VIHRDIKPENLLMGYKGE---LKIADFGWSV-HAPSLRRRTMCGTLDYLPPEMIEGKTHD 190
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKM 307
+ D+W AGV+ Y L G+PPF + I+ + F P P +S +KD++ K+
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF---P-PFLSDGSKDLISKL 246
Query: 308 LHADPKERLSAAEVLNHPWMRVDGDASDKPLD 339
L P +RL V+ HPW++ + P+
Sbjct: 247 LRYHPPQRLPLKGVMEHPWVKANSRRVLPPVY 278
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 271 bits (696), Expect = 3e-88
Identities = 89/261 (34%), Positives = 130/261 (49%), Gaps = 10/261 (3%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ GR LG+G+FG YL K +K A K + +L +RREV+I HL H
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 69
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
NI+ L G + D V LI++ G ++ + + E+ A ++ + YCHS
Sbjct: 70 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 129
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL-RRNYG 247
V+HRD+KPEN L LK DFG SV P DL G+ Y+ PE++ R +
Sbjct: 130 VIHRDIKPENLLLG---SAGELKIADFGWSV-HAPSSRRTDLCGTLDYLPPEMIEGRMHD 185
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKM 307
+ D+WS GV+ Y L G PPF T Q + I R F P ++ A+D++ ++
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF---P-DFVTEGARDLISRL 241
Query: 308 LHADPKERLSAAEVLNHPWMR 328
L +P +R EVL HPW+
Sbjct: 242 LKHNPSQRPMLREVLEHPWIT 262
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 274 bits (702), Expect = 3e-88
Identities = 76/328 (23%), Positives = 136/328 (41%), Gaps = 32/328 (9%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
Y +++G G + V ++ KQ +A K ++ + + ++ R E+ ++ L
Sbjct: 9 RIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVN-LEEADNQTLDSYRNEIAYLNKLQQ 66
Query: 127 H-RNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
H I+ L + ++M+ C +L + K + + M+ VH H
Sbjct: 67 HSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 125
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVL 242
G++H DLKP NFL D LK DFG++ +P V VG+ Y+ PE +
Sbjct: 126 QHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 181
Query: 243 ------------RRNYGAEADIWSAGVILYILLSGVPPFWGETEQ-SIFDAILRGHIDFS 289
+ ++D+WS G ILY + G PF Q S AI+ + +
Sbjct: 182 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI- 240
Query: 290 SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIA------VL 343
+ +D++K L DPK+R+S E+L HP++++ ++ VL
Sbjct: 241 -EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVL 299
Query: 344 TRMKQFRAMNKLKKVALKVIAENLSEEE 371
++ + N + K A + E
Sbjct: 300 GQLVGLNSPNSILKAAKTLYEHYSGGES 327
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 273 bits (700), Expect = 1e-87
Identities = 48/300 (16%), Positives = 82/300 (27%), Gaps = 44/300 (14%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHL--- 124
L G V +LV + + FA K + +R ++E + L
Sbjct: 63 KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGE 122
Query: 125 --------------------TGHRNIVELKGAYEDRHSVN--LIMDLCAG------GELF 156
+L +D N L+M + L
Sbjct: 123 SPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLD 182
Query: 157 DRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216
+ +G A L Q++ + S G++H P+N D L D
Sbjct: 183 FVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIM---PDGRLMLGDVS 239
Query: 217 LSVFFKPGDVFKDLVGSAYYVAPEVLRRN---YGAEADIWSAGVILYILLSGVPPFWGET 273
K G Y E L + + + W G+ +Y + PF T
Sbjct: 240 ALW--KVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVT 297
Query: 274 EQSIFDAIL-----RGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
G + + K ++ + L+ D + RL E + P
Sbjct: 298 PGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFL 357
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 273 bits (699), Expect = 1e-87
Identities = 49/349 (14%), Positives = 99/349 (28%), Gaps = 67/349 (19%)
Query: 33 KIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVR---------NTYIFGRELGRGQFGVT 83
+I S SA S V L + R T + G LG+
Sbjct: 30 RIPQANVRTTSEYMQSAADSLVSTSLWNTGQPFRVESELGERPRTLVRGTVLGQEDPYAY 89
Query: 84 YLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHL------------------- 124
T ++T + F + + ++ ++ EV + L
Sbjct: 90 LEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPF 149
Query: 125 -----TGHRNIVELKGAYEDRHSVN--LIMDLCA------GGELFDRIIAKGHYSERAAA 171
+ ++ ++ D ++ + G L A
Sbjct: 150 DLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARL 209
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ ++ H G++H L+P + + + + T F V
Sbjct: 210 QLTLQVIRLLASLHHYGLVHTYLRPVDIVLD---QRGGVFLTGFEHLV---RDGARVVSS 263
Query: 232 GSAYYVAPEVLRRN------------YGAEADIWSAGVILYILLSGVPPFWGETEQSIFD 279
S + PE+ R D W+ G+++Y + P + +
Sbjct: 264 VSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSE 323
Query: 280 AILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
I R NI + +++ L ++RL + + P
Sbjct: 324 WIFRS--------CKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYE 364
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 271 bits (694), Expect = 1e-87
Identities = 72/317 (22%), Positives = 130/317 (41%), Gaps = 26/317 (8%)
Query: 43 SSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISS 102
+S + + M Y +++G G + V ++ KQ +A K ++
Sbjct: 4 HHHHSSGVDLGTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVN- 61
Query: 103 RKLINRDDVEDVRREVQIMHHLTGH-RNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA 161
+ + ++ R E+ ++ L H I+ L + ++M+ C +L +
Sbjct: 62 LEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKK 120
Query: 162 KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221
K + + M+ VH H G++H DLKP NFL D LK DFG++
Sbjct: 121 KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQM 176
Query: 222 KPGD---VFKDLVGSAYYVAPEVL------------RRNYGAEADIWSAGVILYILLSGV 266
+P V VG+ Y+ PE + + ++D+WS G ILY + G
Sbjct: 177 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
Query: 267 PPFWGETEQ-SIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
PF Q S AI+ + + + +D++K L DPK+R+S E+L HP
Sbjct: 237 TPFQQIINQISKLHAIIDPNHEI--EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 294
Query: 326 WMRVDGDASDKPLDIAV 342
++++ ++
Sbjct: 295 YVQIQTHPVNQMAKGTT 311
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 273 bits (700), Expect = 2e-87
Identities = 84/384 (21%), Positives = 152/384 (39%), Gaps = 39/384 (10%)
Query: 10 SQTQLHSTTADPDTGPGHHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTY 69
+ L + +D P S++++ V G+ Y
Sbjct: 6 HSSGLVPRGSGMKETAAAKFERQHMDSPDLGTDDDDKASSSANECISVKGRI-------Y 58
Query: 70 IFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH-R 128
+++G G + V ++ KQ +A K ++ + + ++ R E+ ++ L H
Sbjct: 59 SILKQIGSGGSSKVFQVLNE-KKQIYAIKYVN-LEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
I+ L + ++M+ C +L + K + + M+ VH H G
Sbjct: 117 KIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 175
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG--DVFKD-LVGSAYYVAPEVL--- 242
++H DLKP NFL D LK DFG++ +P V KD VG+ Y+ PE +
Sbjct: 176 IVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDM 231
Query: 243 ---------RRNYGAEADIWSAGVILYILLSGVPPFWGETEQ-SIFDAILRGHIDFSSDP 292
+ ++D+WS G ILY + G PF Q S AI+ + + +
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI--EF 289
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIA------VLTRM 346
+D++K L DPK+R+S E+L HP++++ ++ VL ++
Sbjct: 290 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQL 349
Query: 347 KQFRAMNKLKKVALKVIAENLSEE 370
+ N + K A + E
Sbjct: 350 VGLNSPNSILKAAKTLYEHYSGGE 373
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276 | Back alignment and structure |
|---|
Score = 267 bits (685), Expect = 1e-86
Identities = 93/264 (35%), Positives = 133/264 (50%), Gaps = 10/264 (3%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y+ G LG G FG + H+ T + A K ++ +K+ + D V ++RE+Q + H
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR-HP 71
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
+I++L ++M+ +GGELFD I G E A L +Q+++ V YCH
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM 131
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNY- 246
V+HRDLKPEN L K DFGLS G+ + GS Y APEV+ R Y
Sbjct: 132 VVHRDLKPENVLLD---AHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYA 188
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
G E DIWS GVILY LL G PF E ++F I G F + ++ S ++
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGG--VFYIPEY--LNRSVATLLMH 244
Query: 307 MLHADPKERLSAAEVLNHPWMRVD 330
ML DP +R + ++ H W + D
Sbjct: 245 MLQVDPLKRATIKDIREHEWFKQD 268
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396 | Back alignment and structure |
|---|
Score = 271 bits (695), Expect = 1e-86
Identities = 70/322 (21%), Positives = 127/322 (39%), Gaps = 47/322 (14%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
++ LG+G + HK T FA K ++ + V+ RE +++ L H+
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL--RPVDVQMREFEVLKKLN-HK 67
Query: 129 NIVELKGAYEDRHSVN--LIMDLCAGGELFDRIIAKGH---YSERAAANLCRQMVTVVHY 183
NIV+L E+ + + LIM+ C G L+ + + E + R +V +++
Sbjct: 68 NIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNH 127
Query: 184 CHSMGVMHRDLKPENFLFSSSA-EDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL 242
G++HR++KP N + S K TDFG + + + F L G+ Y+ P++
Sbjct: 128 LRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMY 187
Query: 243 RRN---------YGAEADIWSAGVILYILLSGVPPFW----GETEQSIFDAILRG----- 284
R YGA D+WS GV Y +G PF + + I+ G
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGA 247
Query: 285 ----------HIDFSSD--PWPNISSSAKDIVK----KMLHADPKERLSAAEVLNHPWMR 328
ID+S D ++S + ++ +L AD ++ +
Sbjct: 248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307
Query: 329 VDGDASDKPLDIAVLTRMKQFR 350
+ + + L +M +
Sbjct: 308 L----HRMVIHVFSLQQMTAHK 325
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 266 bits (683), Expect = 1e-85
Identities = 93/314 (29%), Positives = 152/314 (48%), Gaps = 28/314 (8%)
Query: 47 TSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI 106
+ A+ + +G Y + +G+G F L H T ++ A K I + +
Sbjct: 3 SIASCADEQPHIGN--------YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQ-L 53
Query: 107 NRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYS 166
N ++ + REV+IM L H NIV+L E ++ LIM+ +GGE+FD ++A G
Sbjct: 54 NPTSLQKLFREVRIMKILN-HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMK 112
Query: 167 ERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226
E+ A + RQ+V+ V YCH ++HRDLK EN L D +K DFG S F G
Sbjct: 113 EKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLD---ADMNIKIADFGFSNEFTVGGK 169
Query: 227 FKDLVGSAYYVAPEVLR-RNY-GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG 284
G+ Y APE+ + + Y G E D+WS GVILY L+SG PF G+ + + + +LRG
Sbjct: 170 LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRG 229
Query: 285 HIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD---------GDASD 335
+ + +S+ ++++K+ L +P +R + +++ W+ +
Sbjct: 230 --KYRIPFY--MSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDELKPFVEPEL 285
Query: 336 KPLDIAVLTRMKQF 349
D + M
Sbjct: 286 DISDQKRIDIMVGM 299
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276 | Back alignment and structure |
|---|
Score = 264 bits (678), Expect = 1e-85
Identities = 78/275 (28%), Positives = 133/275 (48%), Gaps = 14/275 (5%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ + LG G +G L ++ T++ A K + ++ + D E++++E+ I L H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLN-HE 65
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
N+V+ G + + L ++ C+GGELFDRI E A Q++ V Y H +G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL---VGSAYYVAPEVL-RR 244
+ HRD+KPEN L E LK +DFGL+ F+ + + L G+ YVAPE+L RR
Sbjct: 126 ITHRDIKPENLLLD---ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 245 NY-GAEADIWSAGVILYILLSGVPPFWGETEQS-IFDAILRGHIDFSSDPWPNISSSAKD 302
+ D+WS G++L +L+G P+ ++ + +PW I S+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK--KTYLNPWKKIDSAPLA 240
Query: 303 IVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKP 337
++ K+L +P R++ ++ W K
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNKPLKKGAKR 275
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361 | Back alignment and structure |
|---|
Score = 266 bits (682), Expect = 4e-85
Identities = 104/360 (28%), Positives = 159/360 (44%), Gaps = 25/360 (6%)
Query: 48 SATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN 107
+ G + M D Y F +++G G FGV L+ K TK+ A K I I+
Sbjct: 2 DRAPVTTGPLDMPIMHDSDR-YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAID 60
Query: 108 RDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSE 167
E+V+RE+ L H NIV K + +IM+ +GGEL++RI G +SE
Sbjct: 61 ----ENVQREIINHRSLR-HPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSE 115
Query: 168 RAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF 227
A +Q+++ V YCHSM + HRDLK EN L S LK DFG S
Sbjct: 116 DEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPR-LKICDFGYSKSSVLHSQP 174
Query: 228 KDLVGSAYYVAPEVL-RRNY-GAEADIWSAGVILYILLSGVPPFWGETEQSIF----DAI 281
K VG+ Y+APEVL R+ Y G AD+WS GV LY++L G PF E + I
Sbjct: 175 KSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRI 234
Query: 282 LRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD----------G 331
L D IS ++ ++ ADP R+S E+ H W +
Sbjct: 235 LSVKYSIPDDIR--ISPECCHLISRIFVADPATRISIPEIKTHSWFLKNLPADLMNESNT 292
Query: 332 DASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTIT 391
+ + + + + + +++ A++ + + + L + D+++ I
Sbjct: 293 GSQFQEPEQPMQSLDTIMQIISEATIPAVRNRCLDDFMTDNLDLDDDMDDFDSESEIDID 352
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323 | Back alignment and structure |
|---|
Score = 263 bits (673), Expect = 3e-84
Identities = 79/269 (29%), Positives = 134/269 (49%), Gaps = 16/269 (5%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ + LG G +G L ++ T++ A K + ++ + D E++++E+ I L H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLN-HE 65
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
N+V+ G + + L ++ C+GGELFDRI E A Q++ V Y H +G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL---VGSAYYVAPEVL-RR 244
+ HRD+KPEN L E LK +DFGL+ F+ + + L G+ YVAPE+L RR
Sbjct: 126 ITHRDIKPENLLLD---ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 245 NY-GAEADIWSAGVILYILLSGVPPF--WGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
+ D+WS G++L +L+G P+ ++ Q D + +PW I S+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK---TYLNPWKKIDSAPL 239
Query: 302 DIVKKMLHADPKERLSAAEVLNHPWMRVD 330
++ K+L +P R++ ++ W
Sbjct: 240 ALLHKILVENPSARITIPDIKKDRWYNKP 268
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336 | Back alignment and structure |
|---|
Score = 263 bits (674), Expect = 3e-84
Identities = 94/307 (30%), Positives = 152/307 (49%), Gaps = 13/307 (4%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
YI LG G FG L TH T+Q+ A K IS + L D V RE+ + L H
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLK-LLRHP 69
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
+I++L + ++++ AGGELFD I+ K +E +Q++ + YCH
Sbjct: 70 HIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHK 128
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNY- 246
++HRDLKPEN L ++ +K DFGLS G+ K GS Y APEV+ + Y
Sbjct: 129 IVHRDLKPENLLLD---DNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYA 185
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
G E D+WS G++LY++L G PF E ++F + + + +S A+ ++++
Sbjct: 186 GPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSC--VYVMPDF--LSPGAQSLIRR 241
Query: 307 MLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTR--MKQFRAMNKLKKVALKVIA 364
M+ ADP +R++ E+ PW V+ +P++ + + + + + I
Sbjct: 242 MIVADPMQRITIQEIRRDPWFNVNLPDYLRPMEEVQGSYADSRIVSKLGEAMGFSEDYIV 301
Query: 365 ENLSEEE 371
E L +E
Sbjct: 302 EALRSDE 308
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 261 bits (670), Expect = 6e-84
Identities = 86/300 (28%), Positives = 136/300 (45%), Gaps = 20/300 (6%)
Query: 36 PPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQF 95
PR S A + GK E + + Y G LG G FG Y
Sbjct: 12 SGLVPRGSHMAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV 71
Query: 96 ACKSISSRKLINRDDVED---VRREVQIMHHLT-GHRNIVELKGAYEDRHSVNLIMDLCA 151
A K + ++ + ++ + V EV ++ ++ G ++ L +E S LI++
Sbjct: 72 AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 131
Query: 152 G-GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPL 210
+LFD I +G E A + Q++ V +CH+ GV+HRD+K EN L + + L
Sbjct: 132 PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--L 189
Query: 211 KATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNY-GAEADIWSAGVILYILLSGVPP 268
K DFG K V+ D G+ Y PE +R Y G A +WS G++LY ++ G P
Sbjct: 190 KLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 248
Query: 269 FWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
F + E I+RG + F +SS + +++ L P +R + E+ NHPWM+
Sbjct: 249 FEHDEE------IIRGQVFFR----QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 298
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 261 bits (669), Expect = 9e-84
Identities = 77/306 (25%), Positives = 122/306 (39%), Gaps = 22/306 (7%)
Query: 41 RPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSI 100
+P + + GK E Y G LG+G FG + + Q A K I
Sbjct: 5 KPLQGPPAPPGTPTPPPGGKDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVI 64
Query: 101 SSRKLINRDDVED---VRREVQIM---HHLTGHRNIVELKGAYEDRHSVNLIMDL-CAGG 153
+++ + D EV ++ GH ++ L +E + L+++
Sbjct: 65 PRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQ 124
Query: 154 ELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKAT 213
+LFD I KG E + Q+V + +CHS GV+HRD+K EN L K
Sbjct: 125 DLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDL--RRGCAKLI 182
Query: 214 DFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNY-GAEADIWSAGVILYILLSGVPPFWG 271
DFG + D G+ Y PE + Y A +WS G++LY ++ G PF
Sbjct: 183 DFGSGALLHDE-PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFER 241
Query: 272 ETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331
+ E IL + F ++S ++++ L P R S E+L PWM+
Sbjct: 242 DQE------ILEAELHFP----AHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPA 291
Query: 332 DASDKP 337
+
Sbjct: 292 EDVPLN 297
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476 | Back alignment and structure |
|---|
Score = 266 bits (682), Expect = 9e-84
Identities = 102/329 (31%), Positives = 159/329 (48%), Gaps = 19/329 (5%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
YI G LG G FG + H+ T + A K ++ +K+ + D V +RRE+Q + H
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFR-HP 76
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
+I++L + ++M+ +GGELFD I G E+ + L +Q+++ V YCH
Sbjct: 77 HIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHM 136
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNY- 246
V+HRDLKPEN L K DFGLS G+ + GS Y APEV+ R Y
Sbjct: 137 VVHRDLKPENVLLD---AHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYA 193
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
G E DIWS+GVILY LL G PF + ++F I G F + + ++ S ++K
Sbjct: 194 GPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDG--IFYTPQY--LNPSVISLLKH 249
Query: 307 MLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAEN 366
ML DP +R + ++ H W + D P D + + M A+ ++
Sbjct: 250 MLQVDPMKRATIKDIREHEWFKQDLPKYLFPEDPSYSSTMIDDEALKEV------CEKFE 303
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEEL 395
SEEE++ + + + + + +
Sbjct: 304 CSEEEVL---SCLYNRNHQDPLAVAYHLI 329
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 260 bits (666), Expect = 2e-83
Identities = 77/311 (24%), Positives = 119/311 (38%), Gaps = 17/311 (5%)
Query: 24 GPGHHPNGLKIDPPGPPRPSSSA----TSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQ 79
G L +P + S T S G +P + ++ LG G
Sbjct: 10 GVDLGTENLYFQSMHQLQPRRVSFRGEASETLQSPGYDPSRPESFFQQSFQRLSRLGHGS 69
Query: 80 FGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139
+G + V K+ + +A K S D EV + H V L+ A+E+
Sbjct: 70 YGEVFKVRSKEDGRLYAVK-RSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEE 128
Query: 140 RHSVNLIMDLCAGGELFDRIIAKGHY-SERAAANLCRQMVTVVHYCHSMGVMHRDLKPEN 198
+ L +LC G L A G E R + + + HS G++H D+KP N
Sbjct: 129 GGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPAN 187
Query: 199 FLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVI 258
K DFGL V + G Y+APE+L+ +YG AD++S G+
Sbjct: 188 IFLGPRGR---CKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGSYGTAADVFSLGLT 244
Query: 259 LYILLSGVP-PFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLS 317
+ + + P GE Q + L +SS + ++ ML DPK R +
Sbjct: 245 ILEVACNMELPHGGEGWQQLRQGYLPPEF------TAGLSSELRSVLVMMLEPDPKLRAT 298
Query: 318 AAEVLNHPWMR 328
A +L P +R
Sbjct: 299 AEALLALPVLR 309
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 271 bits (694), Expect = 2e-83
Identities = 72/313 (23%), Positives = 125/313 (39%), Gaps = 34/313 (10%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ LG G FG H+DT +Q A K R+ ++ + E E+QIM L H
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQC--RQELSPKNRERWCLEIQIMKKLN-HP 72
Query: 129 NIVELKGAYEDRHSVN------LIMDLCAGGELFDRIIAKGH---YSERAAANLCRQMVT 179
N+V + + + L M+ C GG+L + + E L + +
Sbjct: 73 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 132
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAP 239
+ Y H ++HRDLKPEN + + K D G + G++ + VG+ Y+AP
Sbjct: 133 ALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 192
Query: 240 EVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR--------------G 284
E+L + Y D WS G + + ++G PF + + +R G
Sbjct: 193 ELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTG 252
Query: 285 HIDFSSD--PWPNISSSAKDIVKK----MLHADPKERLSAAEVLNHPWMR-VDGDASDKP 337
+ FSS ++S +++ ML ++R + + N + +D S K
Sbjct: 253 AVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLKL 312
Query: 338 LDIAVLTRMKQFR 350
L + + +
Sbjct: 313 LSVMNMVSGRVHT 325
|
| >3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} Length = 180 | Back alignment and structure |
|---|
Score = 253 bits (648), Expect = 1e-82
Identities = 40/181 (22%), Positives = 82/181 (45%), Gaps = 14/181 (7%)
Query: 338 LDIAVLTRMKQFRAMNKLKKVALKVIAENLS--EEEIMGLKEMFKSMDTDNSGTITFEEL 395
+ VL MK + + ++ + + ++A LS I + E+F +DT+++G+++ E+
Sbjct: 2 ISPNVLNNMKSYMKHSNIRNIIINIMAHELSVINNHIKYINELFYKLDTNHNGSLSHREI 61
Query: 396 KAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFD 455
L +G + + ++ ++++A D++ G I Y EF+ +E L AF D
Sbjct: 62 YTVLASVG--IKKWDINRILQALDINDRGNITYTEFMAGCYRWKNIE-STFLKAAFNKID 118
Query: 456 KDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDG--------RINYEEFAAMMR 507
KD GYI+ ++ + + + I V G +I+++EF M
Sbjct: 119 KDEDGYISKSDIVSLVHDKVLDN-NDIDNFFLSVHSIKKGIPREHIINKISFQEFKDYML 177
Query: 508 K 508
Sbjct: 178 S 178
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 255 bits (653), Expect = 1e-81
Identities = 80/292 (27%), Positives = 132/292 (45%), Gaps = 37/292 (12%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI-------------------- 106
N Y E+G+G +GV L +++ +A K +S +KLI
Sbjct: 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGG 72
Query: 107 ---NRDDVEDVRREVQIMHHLTGHRNIVELKGAYED--RHSVNLIMDLCAGGELFDRIIA 161
R +E V +E+ I+ L H N+V+L +D + ++ +L G + + +
Sbjct: 73 CIQPRGPIEQVYQEIAILKKLD-HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME-VPT 130
Query: 162 KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221
SE A + ++ + Y H ++HRD+KP N L ED +K DFG+S F
Sbjct: 131 LKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVG---EDGHIKIADFGVSNEF 187
Query: 222 KPGDVF-KDLVGSAYYVAPEVL---RRNY-GAEADIWSAGVILYILLSGVPPFWGETEQS 276
K D + VG+ ++APE L R+ + G D+W+ GV LY + G PF E
Sbjct: 188 KGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC 247
Query: 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ I P+I+ KD++ +ML +P+ R+ E+ HPW+
Sbjct: 248 LHSKIKSQ--ALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT 297
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335 | Back alignment and structure |
|---|
Score = 254 bits (650), Expect = 1e-80
Identities = 78/309 (25%), Positives = 132/309 (42%), Gaps = 30/309 (9%)
Query: 39 PPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACK 98
P + ++ G K Y LG G FG + K+ ++ K
Sbjct: 4 EEPPKAVELEGLAACEGEYSQK--------YSTMSPLGSGAFGFVWTAVDKEKNKEVVVK 55
Query: 99 SISSRKLINRDDVED-----VRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDL-CAG 152
I K++ +ED V E+ I+ + H NI+++ +E++ L+M+ +G
Sbjct: 56 FIKKEKVLEDCWIEDPKLGKVTLEIAILSRVE-HANIIKVLDIFENQGFFQLVMEKHGSG 114
Query: 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKA 212
+LF I E A+ + RQ+V+ V Y ++HRD+K EN + AED +K
Sbjct: 115 LDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVI---AEDFTIKL 171
Query: 213 TDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRN-Y-GAEADIWSAGVILYILLSGVPPFW 270
DFG + + + G +F G+ Y APEVL N Y G E ++WS GV LY L+ PF
Sbjct: 172 IDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFC 231
Query: 271 GETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330
+ + +S +V +L P+ R + +++ PW+
Sbjct: 232 E------LEETVEA--AIHPPYL--VSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQP 281
Query: 331 GDASDKPLD 339
+ +D +
Sbjct: 282 VNLADYTWE 290
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 253 bits (649), Expect = 2e-80
Identities = 62/325 (19%), Positives = 121/325 (37%), Gaps = 49/325 (15%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSIS--------------SRKLINRDDVE 112
N Y R L +G+F L + +A K + K+ + +
Sbjct: 31 NDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYD 88
Query: 113 DVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH-------- 164
D + E+QI+ + + + +G + V +I + +
Sbjct: 89 DFKNELQIITDIK-NEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCF 147
Query: 165 YSERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223
+ + + ++ Y H+ + HRD+KP N L + +K +DFG S +
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGR---VKLSDFGESEYM-V 203
Query: 224 GDVFKDLVGSAYYVAPEVLRRN---YGAEADIWSAGVILYILLSGVPPFWGE-TEQSIFD 279
K G+ ++ PE GA+ DIWS G+ LY++ V PF + + +F+
Sbjct: 204 DKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFN 263
Query: 280 AILRGHIDF---------------SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324
I +I++ S+ +S+ D +K L +P ER+++ + L H
Sbjct: 264 NIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323
Query: 325 PWMRVDGDASDKPLDIAVLTRMKQF 349
W+ + + + K+
Sbjct: 324 EWLADTNIEDLREFSKELYKKRKKL 348
|
| >1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 188 | Back alignment and structure |
|---|
Score = 242 bits (620), Expect = 3e-78
Identities = 93/156 (59%), Positives = 121/156 (77%), Gaps = 1/156 (0%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
AE LSEEEI GLKE+FK +DTDNSGTITF+ELK GL ++G+ L ESE++ LM+AAD+D +
Sbjct: 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS 60
Query: 424 GTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIK 483
GTIDY EFI AT+H+N++EREE+L AF YFDKD SGYIT++E++ A K + + D I
Sbjct: 61 GTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDD-IHID 119
Query: 484 EIIAEVDIDNDGRINYEEFAAMMRKGNPDMVGNRRR 519
++I E+D DNDG+I+Y EFAAMMRK + RR
Sbjct: 120 DMIKEIDQDNDGQIDYGEFAAMMRKRKGNGGIGRRT 155
|
| >1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 188 | Back alignment and structure |
|---|
Score = 91.1 bits (227), Expect = 2e-21
Identities = 26/115 (22%), Positives = 43/115 (37%), Gaps = 13/115 (11%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+ + EE L F D D SG IT +E++ G L + + +++ D D
Sbjct: 75 LNKLEREEN---LVSAFSYFDKDGSGYITLDEIQQACKDFG--LDDIHIDDMIKEIDQDN 129
Query: 423 NGTIDYIEFIT--------ATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEH 469
+G IDY EF + + + +L A D ++ I H
Sbjct: 130 DGQIDYGEFAAMMRKRKGNGGIGRRTMRKTLNLRDALGLVDNGSNQVIEGYFKHH 184
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 245 bits (627), Expect = 1e-77
Identities = 79/299 (26%), Positives = 143/299 (47%), Gaps = 21/299 (7%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED-VRREVQIMHHLTGH 127
Y+ G LG G +G V +T + A K + +KL + E V++E+Q++ L H
Sbjct: 7 YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLR-H 65
Query: 128 RNIVELKG--AYEDRHSVNLIMDLCAGG--ELFDRIIAKGHYSERAAANLCRQMVTVVHY 183
+N+++L E++ + ++M+ C G E+ D + + + A Q++ + Y
Sbjct: 66 KNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSV-PEKRFPVCQAHGYFCQLIDGLEY 124
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF---FKPGDVFKDLVGSAYYVAPE 240
HS G++H+D+KP N L + LK + G++ F D + GS + PE
Sbjct: 125 LHSQGIVHKDIKPGNLLLT---TGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPE 181
Query: 241 VLR--RNY-GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
+ + G + DIWSAGV LY + +G+ PF G+ +F+ I +G ++
Sbjct: 182 IANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKG--SYAIPGD--CG 237
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMK-QFRAMNKL 355
D++K ML +P +R S ++ H W R ++ P+ I K ++R+M +
Sbjct: 238 PPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPVPIPPSPDTKDRWRSMTVV 296
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 243 bits (623), Expect = 2e-77
Identities = 71/281 (25%), Positives = 117/281 (41%), Gaps = 23/281 (8%)
Query: 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIM 121
M Y +G G +G + K + K + + + + + EV ++
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLL 59
Query: 122 HHLTGHRNIVELKGAYEDRHS--VNLIMDLCAGGELFDRII----AKGHYSERAAANLCR 175
L H NIV DR + + ++M+ C GG+L I + + E +
Sbjct: 60 RELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 176 QMVTVVHYCHSMG-----VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF-KD 229
Q+ + CH V+HRDLKP N +K DFGL+ F K
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDG---KQNVKLGDFGLARILNHDTSFAKT 175
Query: 230 LVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDF 288
VG+ YY++PE + +Y ++DIWS G +LY L + +PPF +++ + I G
Sbjct: 176 FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKF-- 233
Query: 289 SSDPWPNI-SSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
P S +I+ +ML+ R S E+L +P +
Sbjct: 234 --RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLIL 272
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323 | Back alignment and structure |
|---|
Score = 244 bits (624), Expect = 5e-77
Identities = 39/224 (17%), Positives = 74/224 (33%), Gaps = 19/224 (8%)
Query: 293 WPNISSSAKDIVKKMLHADPK------ERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRM 346
I+ ++ K+ D K R A D A + L +
Sbjct: 43 EAQIAQKEQEQKAKLAEYDQKVQNEFDARERAEREREAARG--DAAAEKQRLASLLKDLE 100
Query: 347 KQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRL 406
N+L+ LSEE+ L+++F S SG +F++LK L K +
Sbjct: 101 DDASGYNRLR-----PSKPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTI 155
Query: 407 SESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEE 466
E +++L + D G + YI + + L F D +++G ++ +E
Sbjct: 156 PEGPLKKLFVMVENDTKGRMSYITLVAVANDLAA------LVADFRKIDTNSNGTLSRKE 209
Query: 467 LEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGN 510
+ + D D + + E+ +
Sbjct: 210 FREHFVRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLL 253
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323 | Back alignment and structure |
|---|
Score = 99.5 bits (248), Expect = 3e-23
Identities = 24/163 (14%), Positives = 58/163 (35%), Gaps = 6/163 (3%)
Query: 345 RMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGT 404
++ +K + L+ +E+ L E + + + E + +
Sbjct: 27 KLDHTSFAHKEDRDRLEAQIAQKEQEQKAKLAEYDQKVQNEFDARERAERERE-AARGDA 85
Query: 405 RLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITM 464
+ + L++ + D +G ++ + L + F SG +
Sbjct: 86 AAEKQRLASLLKDLEDDASGYNRLRPSKP---MLSEEDTNI-LRQLFLSSAVSGSGKFSF 141
Query: 465 EELEHALKKYNMGDAK-TIKEIIAEVDIDNDGRINYEEFAAMM 506
++L+ L KY + +K++ V+ D GR++Y A+
Sbjct: 142 QDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVA 184
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323 | Back alignment and structure |
|---|
Score = 67.1 bits (164), Expect = 2e-12
Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTR-LSESEVRQLMEAADVDGNGTIDYIEFIT 433
L+ ++ D D SG ++ EE++ L + + DVD + ++ Y EF+
Sbjct: 255 LRILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVM 314
Query: 434 ATMHMNRVE 442
+ M +
Sbjct: 315 LVLLMFHDD 323
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 245 bits (626), Expect = 6e-77
Identities = 69/292 (23%), Positives = 139/292 (47%), Gaps = 18/292 (6%)
Query: 42 PSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSIS 101
+S + + ME Y+ +++G G FG LV + +Q+ K I+
Sbjct: 3 HHHHHSSGVDLGTENLYFQSMEK----YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEIN 58
Query: 102 SRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA 161
++ + + E+ RREV ++ ++ H NIV+ + ++E+ S+ ++MD C GG+LF RI A
Sbjct: 59 ISRM-SSKEREESRREVAVLANMK-HPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINA 116
Query: 162 --KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219
+ E + Q+ + + H ++HRD+K +N + D ++ DFG++
Sbjct: 117 QKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTK---DGTVQLGDFGIAR 173
Query: 220 FFKPGDVF-KDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSI 277
+ +G+ YY++PE+ Y ++DIW+ G +LY L + F + +++
Sbjct: 174 VLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNL 233
Query: 278 FDAILRGHIDFSSDPWP-NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
I+ G P + S + +V ++ +P++R S +L ++
Sbjct: 234 VLKIISGSF----PPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIA 281
|
| >3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} Length = 204 | Back alignment and structure |
|---|
Score = 232 bits (594), Expect = 4e-74
Identities = 45/192 (23%), Positives = 75/192 (39%), Gaps = 17/192 (8%)
Query: 331 GDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTI 390
G PL + M KL+ L A I GL F+ +D D S ++
Sbjct: 3 GLVPRGPLGSHMD---AVDATMEKLRAQCLSRGAS-----GIQGLARFFRQLDRDGSRSL 54
Query: 391 TFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKA 450
+E + GL KLG L ++E + D +G+GT+D EF+ A RE + A
Sbjct: 55 DADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAA 114
Query: 451 FEYFDKDNSGYITMEELEHALKKYN--------MGDAKTIKEIIAEVDI-DNDGRINYEE 501
F D+ G +T+++L + + ++ + D + DG++ E
Sbjct: 115 FAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAE 174
Query: 502 FAAMMRKGNPDM 513
F + M
Sbjct: 175 FQDYYSGVSASM 186
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 234 bits (600), Expect = 1e-73
Identities = 69/301 (22%), Positives = 127/301 (42%), Gaps = 18/301 (5%)
Query: 36 PPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQF 95
G P + + + + + +++GRGQF Y
Sbjct: 5 SQGMQGPPVPQFQPQKALRPDMGYNTLAN----FRIEKKIGRGQFSEVYRAACLLDGVPV 60
Query: 96 ACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGEL 155
A K + L++ D +E+ ++ L H N+++ ++ + + +N++++L G+L
Sbjct: 61 ALKKVQIFDLMDAKARADCIKEIDLLKQLN-HPNVIKYYASFIEDNELNIVLELADAGDL 119
Query: 156 FDRI----IAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLK 211
I K ER Q+ + + + HS VMHRD+KP N ++ +K
Sbjct: 120 SRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITA---TGVVK 176
Query: 212 ATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPF 269
D GL F LVG+ YY++PE + N Y ++DIWS G +LY + + PF
Sbjct: 177 LGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF 236
Query: 270 WGETE--QSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
+G+ S+ I + D+ P + S + +V ++ DP++R V +
Sbjct: 237 YGDKMNLYSLCKKIEQC--DYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKR 294
Query: 328 R 328
Sbjct: 295 M 295
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 226 bits (579), Expect = 8e-71
Identities = 63/282 (22%), Positives = 106/282 (37%), Gaps = 38/282 (13%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
+ +G G FG + H+ + + K + E REV+ + L
Sbjct: 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKLD 62
Query: 126 GHRNIVELKGAYEDR----------------HSVNLIMDLCAGGELFDRIIAK--GHYSE 167
H NIV G ++ + + M+ C G L I + +
Sbjct: 63 -HVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDK 121
Query: 168 RAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF 227
A L Q+ V Y HS +++RDLKP N + +K DFGL K
Sbjct: 122 VLALELFEQITKGVDYIHSKKLINRDLKPSNIFLV---DTKQVKIGDFGLVTSLKNDGKR 178
Query: 228 KDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI 286
G+ Y++PE + ++YG E D+++ G+IL LL F + G I
Sbjct: 179 TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTA--FETSKFFTDLRDGII 236
Query: 287 DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
K +++K+L P++R + +E+L +
Sbjct: 237 S------DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVW 272
|
| >1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310 | Back alignment and structure |
|---|
Score = 219 bits (561), Expect = 8e-68
Identities = 86/301 (28%), Positives = 133/301 (44%), Gaps = 23/301 (7%)
Query: 36 PPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQF 95
PRP + + +P ED + FG+ LG G F L T +++
Sbjct: 4 TAAEPRPGAGSLQHAQPPPQPRKKRP-ED----FKFGKILGEGSFSTVVLARELATSREY 58
Query: 96 ACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGEL 155
A K + R +I + V V RE +M L H V+L ++D + + GEL
Sbjct: 59 AIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGEL 117
Query: 156 FDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDF 215
I G + E ++V+ + Y H G++HRDLKPEN L + D ++ TDF
Sbjct: 118 LKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE---DMHIQITDF 174
Query: 216 GLS---VFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWG 271
G + VG+A YV+PE+L +D+W+ G I+Y L++G+PPF
Sbjct: 175 GTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 234
Query: 272 ETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERL------SAAEVLNHP 325
E IF I++ DF A+D+V+K+L D +RL + HP
Sbjct: 235 GNEYLIFQKIIKLEYDFP----EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHP 290
Query: 326 W 326
+
Sbjct: 291 F 291
|
| >3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi} Length = 219 | Back alignment and structure |
|---|
Score = 215 bits (549), Expect = 2e-67
Identities = 40/202 (19%), Positives = 79/202 (39%), Gaps = 16/202 (7%)
Query: 331 GDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMG----LKEMFKSMDTDN 386
G K + K +K A + I + + E+ E+FK D +
Sbjct: 2 GACGSKGSTSDKGLASDKDGKKAKDRKEAWERIRQAIPREKTAEAKQRRIELFKKFDKNE 61
Query: 387 SGTITFEELKAGLPK-LGTRLSESEVRQLMEAA---------DVDGNGTIDYIEFITATM 436
+G + ++E+ +G + L S VR + + A ++ G+ D++EF+ +
Sbjct: 62 TGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEFLEFRL 121
Query: 437 HMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDA--KTIKEIIAEVDIDND 494
+ + L F+ D + + EE + A+ K A + + E+D +
Sbjct: 122 MLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGT 181
Query: 495 GRINYEEFAAMMRKGNPDMVGN 516
G + ++EFAA D G+
Sbjct: 182 GSVTFDEFAAWASAVKLDADGD 203
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 219 bits (559), Expect = 2e-66
Identities = 48/347 (13%), Positives = 99/347 (28%), Gaps = 64/347 (18%)
Query: 33 KIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVR---------NTYIFGRELGRGQFGVT 83
+I S SA S V L + R T + G LG+
Sbjct: 35 RIPQANVRTTSEYMQSAADSLVSTSLWNTGQPFRVESELGERPRTLVRGTVLGQEDPYAY 94
Query: 84 YLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHL------------------- 124
T ++T + F + + ++ ++ EV + L
Sbjct: 95 LEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPF 154
Query: 125 -----TGHRNIVELKGAYEDRHSVN--LIMDLCAG------GELFDRIIAKGHYSERAAA 171
+ ++ ++ D ++ + L A
Sbjct: 155 DLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARL 214
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ ++ H G++H L+P + + + + T F V + G +
Sbjct: 215 QLTLQVIRLLASLHHYGLVHTYLRPVDIVLD---QRGGVFLTGFEHLV--RDGASAVSPI 269
Query: 232 GSAY----YVAPEVLRRN------YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAI 281
G + A +L D W+ G+ +Y + P + + I
Sbjct: 270 GRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWI 329
Query: 282 LRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
R NI + +++ L ++RL + + P
Sbjct: 330 FRS--------CKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYE 368
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 215 bits (549), Expect = 5e-66
Identities = 61/313 (19%), Positives = 102/313 (32%), Gaps = 34/313 (10%)
Query: 38 GPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFAC 97
G +S + G + Y+F ++LG G F LV +A
Sbjct: 2 GSSHHHHHHSSGRENL--YFQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYAL 59
Query: 98 KSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR----HSVNLIMDLCAGG 153
K I + D E+ +RE + H NI+ L H L++ G
Sbjct: 60 KRI---LCHEQQDREEAQREADMHRLF-NHPNILRLVAYCLRERGAKHEAWLLLPFFKRG 115
Query: 154 ELFDRI----IAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP 209
L++ I +E L + + H+ G HRDLKP N L +
Sbjct: 116 TLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGD---EGQ 172
Query: 210 LKATDFGLSVFFKPG----------DVFKDLVGSAYYVAPEVL----RRNYGAEADIWSA 255
D G + + Y APE+ D+WS
Sbjct: 173 PVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSL 232
Query: 256 GVILYILLSGVPPFWGETEQS-IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKE 314
G +LY ++ G P+ ++ ++ + P SS+ ++ M+ DP +
Sbjct: 233 GCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSI--PQSPRHSSALWQLLNSMMTVDPHQ 290
Query: 315 RLSAAEVLNHPWM 327
R +L+
Sbjct: 291 RPHIPLLLSQLEA 303
|
| >3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A Length = 169 | Back alignment and structure |
|---|
Score = 210 bits (536), Expect = 6e-66
Identities = 58/169 (34%), Positives = 95/169 (56%), Gaps = 8/169 (4%)
Query: 345 RMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGT 404
+ K + + +K L+EE+ ++E F DTD SGTI +ELK + LG
Sbjct: 4 KAKTVVSARRDQKKG----RVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGF 59
Query: 405 RLSESEVRQLMEAADVDGNGTIDYIEFIT-ATMHMNRVEREEHLYKAFEYFDKDNSGYIT 463
+ E+++++ D DG+GTID+ EF+T T M + E + KAF FD DNSG IT
Sbjct: 60 EPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTIT 119
Query: 464 MEELEHALKKY--NMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGN 510
+++L K+ N+ + ++E+IAE D ++D I+ +EF +M+K +
Sbjct: 120 IKDLRRVAKELGENLTEE-ELQEMIAEADRNDDNEIDEDEFIRIMKKTS 167
|
| >3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} PDB: 2gv5_A 2doq_A 3fwc_A Length = 161 | Back alignment and structure |
|---|
Score = 207 bits (528), Expect = 6e-65
Identities = 44/162 (27%), Positives = 80/162 (49%), Gaps = 7/162 (4%)
Query: 352 MNKLKK-VALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE 410
M+K + + + L EE+ + E F D +N G + + ELK + LG L + E
Sbjct: 1 MSKNRSSLQSGPLNSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKRE 60
Query: 411 VRQLMEAADVDGNGTIDYIEFIT-ATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEH 469
+ L++ D +G + Y +F + + + + + +AF+ FD D++G I+++ L
Sbjct: 61 ILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRR 120
Query: 470 ALKKYNMGDAKT---IKEIIAEVDIDNDGRINYEEFAAMMRK 508
K +G+ T ++ +I E D+D DG IN EF A+
Sbjct: 121 VAK--ELGETLTDEELRAMIEEFDLDGDGEINENEFIAICTD 160
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 213 bits (543), Expect = 8e-65
Identities = 75/321 (23%), Positives = 120/321 (37%), Gaps = 47/321 (14%)
Query: 37 PGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFA 96
GP ++ S VG+ + E R L G F Y + +++A
Sbjct: 2 AGPGSLGGASGRDQSDFVGQTV----ELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYA 57
Query: 97 CKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN--------LIMD 148
K + S + + +EV M L+GH NIV+ A + L+ +
Sbjct: 58 LKRLLSN---EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTE 114
Query: 149 LCAGGELFDRII---AKGHYSERAAANLCRQMVTVVHYCHSMG--VMHRDLKPENFLFSS 203
LC G+L + + ++G S + Q V + H ++HRDLK EN L S+
Sbjct: 115 LC-KGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSN 173
Query: 204 SAEDSPLKATDFGLSVFFKPGDVFKDL-------------VGSAYYVAPEVL----RRNY 246
+K DFG + + + Y PE++
Sbjct: 174 ---QGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPI 230
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
G + DIW+ G ILY+L PF E I+ G P + +++
Sbjct: 231 GEKQDIWALGCILYLLCFRQHPF----EDGAKLRIVNGKYSIP--PHDTQYTVFHSLIRA 284
Query: 307 MLHADPKERLSAAEVLNHPWM 327
ML +P+ERLS AEV++
Sbjct: 285 MLQVNPEERLSIAEVVHQLQE 305
|
| >3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A Length = 220 | Back alignment and structure |
|---|
Score = 208 bits (532), Expect = 9e-65
Identities = 33/183 (18%), Positives = 67/183 (36%), Gaps = 6/183 (3%)
Query: 324 HPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMD 383
P + + +P+ + + ++ ++ + + ++ + + F +D
Sbjct: 2 QPPVANFCLWNLQPIQGSWMGAACIYQMPPSVRNTWWFPLLNTIPLDQYTRIYQWFMGVD 61
Query: 384 TDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVER 443
D SGT+ EL G G RLS ++M D D NG I + EF+ M
Sbjct: 62 RDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYKFM----- 116
Query: 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFA 503
E Y F + SG + E+ AL++ + ++ + + +
Sbjct: 117 -ELAYNLFVMNARARSGTLEPHEILPALQQLGFYINQRTSLLLHRLFARGMAFCDLNCWI 175
Query: 504 AMM 506
A+
Sbjct: 176 AIC 178
|
| >3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A Length = 220 | Back alignment and structure |
|---|
Score = 74.8 bits (184), Expect = 1e-15
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYE 500
++ +Y+ F D+D SG + + EL + +T ++ D D +G I++
Sbjct: 48 DQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFY 107
Query: 501 EFAAMMRK 508
EF AM +
Sbjct: 108 EFMAMYKF 115
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 210 bits (537), Expect = 2e-64
Identities = 73/300 (24%), Positives = 119/300 (39%), Gaps = 46/300 (15%)
Query: 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREV 118
G+ + D + + LGRG FGV + +K +A K I R E V REV
Sbjct: 1 GRYLTD----FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRI--RLPNRELAREKVMREV 54
Query: 119 QIMHHLTGHRNIVELKGAYEDRHS------------VNLIMDLCAGGELFDRIIAKGHYS 166
+ + L H IV A+ ++++ + + M LC L D + +
Sbjct: 55 KALAKLE-HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIE 113
Query: 167 ---ERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223
++ Q+ V + HS G+MHRDLKP N F+ D +K DFGL
Sbjct: 114 ERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFT---MDDVVKVGDFGLVTAMDQ 170
Query: 224 GDVFKDL-------------VGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPF 269
+ + + VG+ Y++PE + +Y + DI+S G+IL+ LL PF
Sbjct: 171 DEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PF 227
Query: 270 WGETEQS-IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ E+ + + +V+ ML P ER A ++ +
Sbjct: 228 STQMERVRTLTDVRNLKF---PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFE 284
|
| >1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Length = 134 | Back alignment and structure |
|---|
Score = 204 bits (521), Expect = 3e-64
Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 6/135 (4%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITA 434
+ +FK +D + G +++EE+KA + K +E ++ + ++ D DGNG ID EF
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 435 TMHMNRV---EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDI 491
+ + + L ++ D D G +T EE+ KK+ + + E + + D
Sbjct: 62 YGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEK---VAEQVMKADA 118
Query: 492 DNDGRINYEEFAAMM 506
+ DG I EEF
Sbjct: 119 NGDGYITLEEFLEFS 133
|
| >1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Length = 134 | Back alignment and structure |
|---|
Score = 72.9 bits (180), Expect = 1e-15
Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
Query: 447 LYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---IKEIIAEVDIDNDGRINYEEFA 503
F+ D + G ++ EE++ + K K ++ I +D D +G I+ EFA
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSK--KRAIKNEQLLQLIFKSIDADGNGEIDQNEFA 59
Query: 504 AMMRK 508
Sbjct: 60 KFYGS 64
|
| >1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... Length = 161 | Back alignment and structure |
|---|
Score = 203 bits (519), Expect = 1e-63
Identities = 51/164 (31%), Positives = 87/164 (53%), Gaps = 14/164 (8%)
Query: 352 MNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTD-NSGTITFEELKAGLPKLGTRLSESE 410
M+ + K E L+EE+ K F G+I+ +EL + LG + E
Sbjct: 1 MDDIYKA----AVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEE 56
Query: 411 VRQLMEAADVDGNGTIDYIEFITATMHM----NRVEREEHLYKAFEYFDKDNSGYITMEE 466
++++++ D DG+GT+D+ EF+ + ++ + EE L F FDK+ GYI +EE
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEE 116
Query: 467 LEHALKKYNMGDAKT---IKEIIAEVDIDNDGRINYEEFAAMMR 507
L+ L+ G+ T I+E++ + D +NDGRI+Y+EF M+
Sbjct: 117 LKIMLQ--ATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
|
| >1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... Length = 161 | Back alignment and structure |
|---|
Score = 68.4 bits (168), Expect = 8e-14
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 442 EREEHLYKAFEYFDKD-NSGYITMEELEHALKK--YNMGDAKTIKEIIAEVDIDNDGRIN 498
E++ AF+ F G I+ +EL ++ N ++E+I EVD D G ++
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPE-ELQEMIDEVDEDGSGTVD 73
Query: 499 YEEFAAMMRK 508
++EF MM +
Sbjct: 74 FDEFLVMMVR 83
|
| >2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A Length = 143 | Back alignment and structure |
|---|
Score = 203 bits (518), Expect = 1e-63
Identities = 46/144 (31%), Positives = 84/144 (58%), Gaps = 4/144 (2%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
+EE+ ++E F D D +GTI +ELK + LG + E+++++ D +G G ++
Sbjct: 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 428 YIEFIT-ATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY--NMGDAKTIKE 484
+ +F+T T M+ + +E + KAF+ FD D +G I+ + L+ K+ N+ D ++E
Sbjct: 61 FGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDE-ELQE 119
Query: 485 IIAEVDIDNDGRINYEEFAAMMRK 508
+I E D D DG ++ +EF +M+K
Sbjct: 120 MIDEADRDGDGEVSEQEFLRIMKK 143
|
| >2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A Length = 143 | Back alignment and structure |
|---|
Score = 39.4 bits (93), Expect = 6e-04
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 355 LKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEE 394
LK+V K + ENL++EE+ +EM D D G ++ +E
Sbjct: 101 LKRV-AKELGENLTDEEL---QEMIDEADRDGDGEVSEQE 136
|
| >2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A Length = 179 | Back alignment and structure |
|---|
Score = 203 bits (519), Expect = 3e-63
Identities = 64/154 (41%), Positives = 90/154 (58%), Gaps = 6/154 (3%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+A+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 423 NGTIDYIEFIT-ATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT 481
NGTID+ EF+T M + EE + +AF FDKD +GYI+ EL H + N+G+ T
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLT 118
Query: 482 ---IKEIIAEVDIDNDGRINYEEFAAMMRKGNPD 512
+ E+I E DID DG++NYEEF MM
Sbjct: 119 DEEVDEMIREADIDGDGQVNYEEFVQMMTAKGGG 152
|
| >2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A Length = 179 | Back alignment and structure |
|---|
Score = 104 bits (263), Expect = 2e-26
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 7/106 (6%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+ + SEEE ++E F+ D D +G I+ EL+ + LG +L++ EV +++ AD+DG
Sbjct: 77 MKDTDSEEE---IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 133
Query: 423 NGTIDYIEFI---TATM-HMNRVEREEHLYKAFEYFDKDNSGYITM 464
+G ++Y EF+ TA R+E + K + +
Sbjct: 134 DGQVNYEEFVQMMTAKGGGGGAAARKEVIRNKIRAIGKMARVFSVL 179
|
| >3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A Length = 153 | Back alignment and structure |
|---|
Score = 201 bits (515), Expect = 4e-63
Identities = 45/154 (29%), Positives = 77/154 (50%), Gaps = 9/154 (5%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+ +L EEI L+E F+ D D G I +L + +G +E E+ +L + +++
Sbjct: 1 MDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNL 60
Query: 423 NGTIDYIEFITATMHMNRVE-----REEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG 477
G +D+ +F+ E + L AF FD + G I+ EL A++ +G
Sbjct: 61 GGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRAL-LG 119
Query: 478 DAKT---IKEIIAEVDIDNDGRINYEEFAAMMRK 508
I+EII +VD++ DGR+++EEF MM +
Sbjct: 120 HQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR 153
|
| >3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A Length = 153 | Back alignment and structure |
|---|
Score = 42.9 bits (102), Expect = 4e-05
Identities = 8/40 (20%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 355 LKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEE 394
L++ ++ + +I +E+ + +D + G + FEE
Sbjct: 110 LREAMRALLGHQVGHRDI---EEIIRDVDLNGDGRVDFEE 146
|
| >2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A Length = 158 | Back alignment and structure |
|---|
Score = 202 bits (515), Expect = 5e-63
Identities = 41/156 (26%), Positives = 81/156 (51%), Gaps = 11/156 (7%)
Query: 364 AENLSEEEIMGLKEMFKSMDT-DNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
LS ++ L+ F+ +T + SG ++ +++ L LG + ++S +RQL++ D G
Sbjct: 4 VSKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFG 63
Query: 423 NGTIDYIEFITATM-----HMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG 477
NG ID+ F +N + ++ L +AF +DK+ +GYI+ + + L +
Sbjct: 64 NGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILA--ELD 121
Query: 478 DAKT---IKEIIAEVDIDNDGRINYEEFAAMMRKGN 510
+ + + +I E+D D G +++EEF +M G+
Sbjct: 122 ETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMTGGD 157
|
| >4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 1f54_A 1f55_A Length = 147 | Back alignment and structure |
|---|
Score = 200 bits (512), Expect = 8e-63
Identities = 58/149 (38%), Positives = 87/149 (58%), Gaps = 5/149 (3%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+++NL+EE+I KE F D DNSG+I+ EL + LG SE+EV LM DVDG
Sbjct: 1 MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDG 60
Query: 423 NGTIDYIEFIT-ATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY--NMGDA 479
N I++ EF+ + + + E+ L +AF+ FDK+ G I+ EL+H L + DA
Sbjct: 61 NHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDA 120
Query: 480 KTIKEIIAEVDIDNDGRINYEEFAAMMRK 508
+ E++ EV D G IN ++FAA++ K
Sbjct: 121 -EVDEMLREVS-DGSGEINIKQFAALLSK 147
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 206 bits (525), Expect = 9e-63
Identities = 62/283 (21%), Positives = 111/283 (39%), Gaps = 34/283 (12%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ ++G G+FG + + +A K S + L D ++ REV L H
Sbjct: 13 FHELEKIGSGEFGSVFKCVKRLDGCIYAIK-RSKKPLAGSVDEQNALREVYAHAVLGQHS 71
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRI----IAKGHYSERAAANLCRQMVTVVHYC 184
++V A+ + + + + C GG L D I ++ E +L Q+ + Y
Sbjct: 72 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 131
Query: 185 HSMGVMHRDLKPENFLFSSS----------------AEDSPLKATDFGLSVFFKPGDVFK 228
HSM ++H D+KP N S + + K D G V
Sbjct: 132 HSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVE- 190
Query: 229 DLVGSAYYVAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI 286
G + ++A EVL+ N + +ADI++ + + P + I +G +
Sbjct: 191 --EGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLP---RNGDQWHEIRQGRL 245
Query: 287 DFSSDPWP-NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
P +S +++K M+H DP+ R SA ++ H +
Sbjct: 246 ----PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLL 284
|
| >1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... Length = 162 | Back alignment and structure |
|---|
Score = 197 bits (504), Expect = 3e-61
Identities = 52/150 (34%), Positives = 80/150 (53%), Gaps = 9/150 (6%)
Query: 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNG 424
LSEE I K F D D G I+ +EL + LG ++ E+ ++E D DG+G
Sbjct: 12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSG 71
Query: 425 TIDYIEFITATMHMNR----VEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAK 480
TID+ EF+ + + + EE L F FDK+ G+I +EEL L+ G+
Sbjct: 72 TIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILR--ATGEHV 129
Query: 481 T---IKEIIAEVDIDNDGRINYEEFAAMMR 507
T I++++ + D +NDGRI+++EF MM
Sbjct: 130 TEEDIEDLMKDSDKNNDGRIDFDEFLKMME 159
|
| >1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... Length = 162 | Back alignment and structure |
|---|
Score = 73.0 bits (180), Expect = 2e-15
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKK--YNMGDAKTIKEIIAEVDIDNDGRINY 499
E AF+ FD D G I+ +EL ++ N + II EVD D G I++
Sbjct: 17 EMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKE-ELDAIIEEVDEDGSGTIDF 75
Query: 500 EEFAAMMRK 508
EEF MM +
Sbjct: 76 EEFLVMMVR 84
|
| >1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* Length = 195 | Back alignment and structure |
|---|
Score = 197 bits (503), Expect = 7e-61
Identities = 40/175 (22%), Positives = 71/175 (40%), Gaps = 22/175 (12%)
Query: 356 KKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAG-----LPKLGTRLSESE 410
K A+K+ + + I K MF +D + +G IT +E+ + KL +++
Sbjct: 3 SKYAVKLKTDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTK 62
Query: 411 VRQLMEAADVDGNGT-----IDYIEFIT-----ATMHMNRVEREEH------LYKAFEYF 454
Q+ A G G I + +F+ AT + + R E F+ F
Sbjct: 63 RHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIF 122
Query: 455 DKDNSGYITMEELEHALKKYNMGDA-KTIKEIIAEVDIDNDGRINYEEFAAMMRK 508
DKD SG IT++E + K + + + + D+DN G ++ +E
Sbjct: 123 DKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHLG 177
|
| >1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* Length = 195 | Back alignment and structure |
|---|
Score = 75.6 bits (186), Expect = 5e-16
Identities = 24/89 (26%), Positives = 32/89 (35%), Gaps = 2/89 (2%)
Query: 351 AMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE 410
+L LK A N +F D D SGTIT +E KA G S+ +
Sbjct: 91 GWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQED 150
Query: 411 VRQLMEAADVDGNGTIDYIEFITATMHMN 439
D+D G +D E H+
Sbjct: 151 CEATFRHCDLDNAGDLDVDEMT--RQHLG 177
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 202 bits (517), Expect = 2e-60
Identities = 71/264 (26%), Positives = 124/264 (46%), Gaps = 16/264 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
R +G+G FG +V DTK+ +A K ++ +K + R++V +V +E+QIM L H +V
Sbjct: 21 RAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLE-HPFLVN 79
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L +++D + +++DL GG+L + H+ E ++V + Y + ++HR
Sbjct: 80 LWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHR 139
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRN----YGA 248
D+KP+N L E + TDF ++ + G+ Y+APE+ Y
Sbjct: 140 DMKPDNILLD---EHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSF 196
Query: 249 EADIWSAGVILYILLSGVPPFWG---ETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305
D WS GV Y LL G P+ + + I + + S ++K
Sbjct: 197 AVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYP----SAWSQEMVSLLK 252
Query: 306 KMLHADPKERL-SAAEVLNHPWMR 328
K+L +P +R ++V N P+M
Sbjct: 253 KLLEPNPDQRFSQLSDVQNFPYMN 276
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350 | Back alignment and structure |
|---|
Score = 200 bits (511), Expect = 6e-60
Identities = 80/303 (26%), Positives = 143/303 (47%), Gaps = 29/303 (9%)
Query: 43 SSSATSATSSSVGRVLGKPMEDVRNTYI-------------FGRELGRGQFGVTYLVTHK 89
+++ + SV L K ED + + LG G FG LV HK
Sbjct: 4 AAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK 63
Query: 90 DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDL 149
++ +A K + +K++ +E E +I+ + +V+L+ +++D ++ ++M+
Sbjct: 64 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEY 122
Query: 150 CAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP 209
AGGE+F + G +SE A Q+V Y HS+ +++RDLKPEN L
Sbjct: 123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ---QGY 179
Query: 210 LKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPP 268
++ TDFG + + L G+ +APE++ Y D W+ GV++Y + +G PP
Sbjct: 180 IQVTDFGFAK--RVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 269 FWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERL-----SAAEVLN 323
F+ + I++ I+ G + F + SS KD+++ +L D +R ++ N
Sbjct: 238 FFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 324 HPW 326
H W
Sbjct: 294 HKW 296
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 200 bits (511), Expect = 8e-60
Identities = 46/286 (16%), Positives = 95/286 (33%), Gaps = 36/286 (12%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKD-----TKQQFACKSISSRKLINRDDVEDVRREVQIM 121
LG G F Y T D KQ+F K + + ++ +
Sbjct: 65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPW---EFYIGTQLMERL 121
Query: 122 HHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHY-----SERAAANLCRQ 176
++ A+ ++ L+ +L + G L + I + + + +
Sbjct: 122 KPSM-QHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMR 180
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP--------LKATDFGLSV---FFKPGD 225
M+ ++ H ++H D+KP+NF+ + + L D G S+ F G
Sbjct: 181 MLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGT 240
Query: 226 VFKDLVGSAYYVAPEVL-RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSI-FDAILR 283
+F ++ + E+L + + + D + +Y +L G + + R
Sbjct: 241 IFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGLFR 300
Query: 284 GHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329
D W + ML+ L + ++L +V
Sbjct: 301 RL--PHLDMW-------NEFFHVMLNIPDCHHLPSLDLLRQKLKKV 337
|
| >2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 142 | Back alignment and structure |
|---|
Score = 192 bits (490), Expect = 2e-59
Identities = 42/142 (29%), Positives = 71/142 (50%), Gaps = 7/142 (4%)
Query: 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDY 428
++++ KE F+ D++ +G IT E L+ L + G R+ + ++ AD GNG I +
Sbjct: 2 DDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQF 61
Query: 429 IEFIT-ATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---IKE 484
EF++ M + E+ L +AF FD + +GYI L+ AL N+GD E
Sbjct: 62 PEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALL--NLGDRLKPHEFAE 119
Query: 485 IIAEVDIDNDGRINYEEFAAMM 506
+ + + G+I Y+ F M
Sbjct: 120 FLGITETE-KGQIRYDNFINTM 140
|
| >2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 142 | Back alignment and structure |
|---|
Score = 71.0 bits (175), Expect = 6e-15
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 447 LYKAFEYFDKDNSGYITMEELEHALKK--YNMGDAKTIKEIIAEVDIDNDGRINYEEFAA 504
+AFE FD + +G+IT E L+ LK+ + A E+ E D +G+I + EF +
Sbjct: 8 FKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPA-AFNEMFNEADATGNGKIQFPEFLS 66
Query: 505 MMRK 508
MM +
Sbjct: 67 MMGR 70
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410 | Back alignment and structure |
|---|
Score = 197 bits (504), Expect = 3e-58
Identities = 79/262 (30%), Positives = 126/262 (48%), Gaps = 16/262 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+GRG FG LV HK T++ +A K +S ++I R D E IM +V+L
Sbjct: 77 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN-SPWVVQLF 135
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
A++D + ++M+ GG+L +++ E+ A ++V + HSMG +HRD+
Sbjct: 136 YAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDV 194
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD--LVGSAYYVAPEVLRR-----NYG 247
KP+N L S LK DFG + + + VG+ Y++PEVL+ YG
Sbjct: 195 KPDNMLLDKSGH---LKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYG 251
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKM 307
E D WS GV LY +L G PF+ ++ + I+ + +IS AK+++
Sbjct: 252 RECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAF 311
Query: 308 LHADPKERL---SAAEVLNHPW 326
L D + RL E+ H +
Sbjct: 312 LT-DREVRLGRNGVEEIKRHLF 332
|
| >1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... Length = 148 | Back alignment and structure |
|---|
Score = 188 bits (481), Expect = 3e-58
Identities = 64/149 (42%), Positives = 88/149 (59%), Gaps = 6/149 (4%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
AE L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGN
Sbjct: 1 AEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 424 GTIDYIEFITA-TMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT- 481
GTID+ EF++ M + EE L +AF+ FD+D +G I+ EL H + N+G+ T
Sbjct: 61 GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMT--NLGEKLTD 118
Query: 482 --IKEIIAEVDIDNDGRINYEEFAAMMRK 508
+ E+I E DID DG INYEEF MM
Sbjct: 119 DEVDEMIREADIDGDGHINYEEFVRMMVS 147
|
| >3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* Length = 155 | Back alignment and structure |
|---|
Score = 188 bits (481), Expect = 4e-58
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
Query: 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDY 428
+EI L + FK +D DNSG+++ EE + LP+L V+++++ D DGNG +D+
Sbjct: 2 ADEIKRLGKRFKKLDLDNSGSLSVEEFMS-LPELQ---QNPLVQRVIDIFDTDGNGEVDF 57
Query: 429 IEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY---NMGDA---KT 481
EFI + ++E+ L AF +D D GYI+ EL LK N+ D +
Sbjct: 58 KEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQI 117
Query: 482 IKEIIAEVDIDNDGRINYEEFAAMMRKGN 510
+ + I D D DGRI++EEF A++ +
Sbjct: 118 VDKTIINADKDGDGRISFEEFCAVVGGLD 146
|
| >3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* Length = 155 | Back alignment and structure |
|---|
Score = 75.0 bits (185), Expect = 3e-16
Identities = 16/69 (23%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 445 EHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAA 504
+ L K F+ D DNSG +++EE + + ++ +I D D +G ++++EF
Sbjct: 6 KRLGKRFKKLDLDNSGSLSVEEFMSLPE---LQQNPLVQRVIDIFDTDGNGEVDFKEFIE 62
Query: 505 MMRKGNPDM 513
+ + +
Sbjct: 63 GVSQFSVKG 71
|
| >3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* Length = 155 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 1e-09
Identities = 23/129 (17%), Positives = 45/129 (34%), Gaps = 9/129 (6%)
Query: 360 LKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEE-LKAGLPKLGTRLSESEVRQLMEAA 418
+ E ++ + DTD +G + F+E ++ E ++R
Sbjct: 28 FMSLPELQQNPL---VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIY 84
Query: 419 DVDGNGTIDYIEFITATMHMNRV-----EREEHLYKAFEYFDKDNSGYITMEELEHALKK 473
D+D +G I E M + ++ + K DKD G I+ EE +
Sbjct: 85 DMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGG 144
Query: 474 YNMGDAKTI 482
++ +
Sbjct: 145 LDIHKKMVV 153
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318 | Back alignment and structure |
|---|
Score = 193 bits (494), Expect = 7e-58
Identities = 75/264 (28%), Positives = 124/264 (46%), Gaps = 16/264 (6%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ R LG G FG +L+ + + +A K + ++ VE E ++ +T H
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT-HP 66
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
I+ + G ++D + +IMD GGELF + + A ++ + Y HS
Sbjct: 67 FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKD 126
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRN-YG 247
+++RDLKPEN L + +K TDFG + DV L G+ Y+APEV+ Y
Sbjct: 127 IIYRDLKPENILLDK---NGHIKITDFGFAK--YVPDVTYTLCGTPDYIAPEVVSTKPYN 181
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKM 307
D WS G+++Y +L+G PF+ ++ IL + F P + KD++ ++
Sbjct: 182 KSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP----PFFNEDVKDLLSRL 237
Query: 308 LHADPKERL-----SAAEVLNHPW 326
+ D +RL +V NHPW
Sbjct: 238 ITRDLSQRLGNLQNGTEDVKNHPW 261
|
| >2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A Length = 226 | Back alignment and structure |
|---|
Score = 184 bits (469), Expect = 2e-55
Identities = 41/195 (21%), Positives = 83/195 (42%), Gaps = 16/195 (8%)
Query: 336 KPLDIAVL--TRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTD--NSGTIT 391
K L +VL + ++ L L S EI L E+FK + + + G I
Sbjct: 9 KHLCTSVLGCFDLDLYKQSGGLGDPELLARDTVFSVSEIEALYELFKKISSAVIDDGLIN 68
Query: 392 FEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITA-TMHMNRVEREEHLYKA 450
EE + L K + S ++ + D NG + + EF A ++ ++ ++ +
Sbjct: 69 KEEFQLALFKTNKKESL-FADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFS 127
Query: 451 FEYFDKDNSGYITMEELEHALKKY---------NMGDAKTIKEIIAEVDIDNDGRINYEE 501
F+ +D G+I +E++ + + I + E D +DG+I+ EE
Sbjct: 128 FQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEE 187
Query: 502 FAAMMRKGNPDMVGN 516
+ +++ + +P ++ N
Sbjct: 188 WRSLVLR-HPSLLKN 201
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 196 bits (500), Expect = 2e-55
Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 20/272 (7%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH--HL 124
N + R +GRG FG Y DT + +A K + +++ + E ++
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 125 TGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYC 184
IV + A+ ++ I+DL GG+L + G +SE +++ + +
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 308
Query: 185 HSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR 244
H+ V++RDLKP N L E ++ +D GL+ F VG+ Y+APEVL++
Sbjct: 309 HNRFVVYRDLKPANILLD---EHGHVRISDLGLACDF-SKKKPHASVGTHGYMAPEVLQK 364
Query: 245 N--YGAEADIWSAGVILYILLSGVPPFWGETEQS---IFDAILRGHIDFSSDPWPNISSS 299
Y + AD +S G +L+ LL G PF + I L ++ + S
Sbjct: 365 GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP----DSFSPE 420
Query: 300 AKDIVKKMLHADPKERL-----SAAEVLNHPW 326
+ +++ +L D RL A EV P+
Sbjct: 421 LRSLLEGLLQRDVNRRLGCLGRGAQEVKESPF 452
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412 | Back alignment and structure |
|---|
Score = 189 bits (483), Expect = 4e-55
Identities = 67/267 (25%), Positives = 121/267 (45%), Gaps = 20/267 (7%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+GRG F +V K T Q +A K ++ ++ R +V R E ++ + R I +L
Sbjct: 69 IGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGD-RRWITQLH 127
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRD 193
A++D + + L+M+ GG+L + G A ++V + H +G +HRD
Sbjct: 128 FAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRD 187
Query: 194 LKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD--LVGSAYYVAPEVLRR------- 244
+KP+N L ++ DFG + + + VG+ Y++PE+L+
Sbjct: 188 IKPDNILLDR---CGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGT 244
Query: 245 -NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP-NISSSAKD 302
+YG E D W+ GV Y + G PF+ ++ + I+ S + A+D
Sbjct: 245 GSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARD 304
Query: 303 IVKKMLHADPKERL---SAAEVLNHPW 326
++++L P+ RL A + HP+
Sbjct: 305 FIQRLLC-PPETRLGRGGAGDFRTHPF 330
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 187 bits (476), Expect = 9e-55
Identities = 79/297 (26%), Positives = 133/297 (44%), Gaps = 21/297 (7%)
Query: 40 PRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKS 99
P+ SS + + LG +++ + F R LG+G FG L K+T +A K
Sbjct: 2 PKESSKEGNGIGVNSSNRLG--IDN----FEFIRVLGKGSFGKVMLARVKETGDLYAVKV 55
Query: 100 ISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRI 159
+ ++ DDVE E +I+ H + +L ++ + +M+ GG+L I
Sbjct: 56 LKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI 115
Query: 160 IAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS- 218
+ E A ++++ + + H G+++RDLK +N L + K DFG+
Sbjct: 116 QKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDH---EGHCKLADFGMCK 172
Query: 219 VFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSI 277
G G+ Y+APE+L+ YG D W+ GV+LY +L G PF E E +
Sbjct: 173 EGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDL 232
Query: 278 FDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERL------SAAEVLNHPWMR 328
F+AIL + + P + A I+K + +P RL +L HP+ +
Sbjct: 233 FEAILNDEVVY---P-TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFK 285
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345 | Back alignment and structure |
|---|
Score = 186 bits (475), Expect = 1e-54
Identities = 71/257 (27%), Positives = 123/257 (47%), Gaps = 10/257 (3%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG +L K T Q FA K++ ++ DDVE E +++ H + +
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMF 84
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
++ + ++ +M+ GG+L I + + A +++ + + HS G+++RDL
Sbjct: 85 CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDL 144
Query: 195 KPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADI 252
K +N L D +K DFG+ G+ Y+APE+L Y D
Sbjct: 145 KLDNILLDK---DGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDW 201
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
WS GV+LY +L G PF G+ E+ +F +I + + P + AKD++ K+ +P
Sbjct: 202 WSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFY---P-RWLEKEAKDLLVKLFVREP 257
Query: 313 KERL-SAAEVLNHPWMR 328
++RL ++ HP R
Sbjct: 258 EKRLGVRGDIRQHPLFR 274
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 185 bits (471), Expect = 2e-54
Identities = 75/334 (22%), Positives = 125/334 (37%), Gaps = 30/334 (8%)
Query: 5 NGLPSSQTQLHSTTADPDTGPGHHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKPMED 64
+ S Q ++ A + L P + + + V + E+
Sbjct: 3 GSVSSGQAHSLASLAKTWSSGSAKLQRL------GPETEDNEGVLLTEKLKPVDYEYREE 56
Query: 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR-REVQIMHH 123
V +GRG FG + + K T Q A K + +E R E+
Sbjct: 57 VHW-MTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKV---------RLEVFRVEELVACAG 106
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHY 183
L+ IV L GA + VN+ M+L GG L I G E A Q + + Y
Sbjct: 107 LS-SPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEY 165
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV------FKDLVGSAYYV 237
H+ ++H D+K +N L SS S DFG ++ +P + + G+ ++
Sbjct: 166 LHTRRILHGDVKADNVLLSSDG--SRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHM 223
Query: 238 APEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETE-QSIFDAILRGHIDFSSDPWPN 295
APEV+ A+ DIWS+ ++ +L+G P+ I P P+
Sbjct: 224 APEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCL-KIASEPPPIREIP-PS 281
Query: 296 ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329
+ +++ L +P R SA E+ +
Sbjct: 282 CAPLTAQAIQEGLRKEPVHRASAMELRRKVGKAL 315
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373 | Back alignment and structure |
|---|
Score = 185 bits (473), Expect = 3e-54
Identities = 75/302 (24%), Positives = 139/302 (46%), Gaps = 16/302 (5%)
Query: 34 IDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNT---YIFGRELGRGQFGVTYLVTHKD 90
I P P ++ + + ++ P + + F + +G+G FG L HK
Sbjct: 2 ISQPQEPELMNANPAPPPAPSQQINLGPSSNPHAKPSDFHFLKVIGKGSFGKVLLARHKA 61
Query: 91 TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLC 150
+ +A K + + ++ + + + + E ++ H +V L +++ + ++D
Sbjct: 62 EEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYI 121
Query: 151 AGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPL 210
GGELF + + + E A ++ + + Y HS+ +++RDLKPEN L S +
Sbjct: 122 NGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDS---QGHI 178
Query: 211 KATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPP 268
TDFGL + G+ Y+APEVL + Y D W G +LY +L G+PP
Sbjct: 179 VLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPP 238
Query: 269 FWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERL----SAAEVLNH 324
F+ ++D IL + PNI++SA+ +++ +L D +RL E+ +H
Sbjct: 239 FYSRNTAEMYDNILNKPLQLK----PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSH 294
Query: 325 PW 326
+
Sbjct: 295 VF 296
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437 | Back alignment and structure |
|---|
Score = 187 bits (477), Expect = 4e-54
Identities = 70/265 (26%), Positives = 126/265 (47%), Gaps = 18/265 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+GRG FG +V K+ + FA K ++ +++ R + R E ++ + + I L
Sbjct: 82 IGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGD-SKWITTLH 140
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRII-AKGHYSERAAANLCRQMVTVVHYCHSMGVMHRD 193
A++D +++ L+MD GG+L + + E A +MV + H + +HRD
Sbjct: 141 YAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRD 200
Query: 194 LKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKD-LVGSAYYVAPEVLRRN------ 245
+KP+N L + ++ DFG + G V VG+ Y++PE+L+
Sbjct: 201 IKPDNILMDM---NGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGR 257
Query: 246 YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPW-PNISSSAKDIV 304
YG E D WS GV +Y +L G PF+ E+ + I+ F ++S +AKD++
Sbjct: 258 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLI 317
Query: 305 KKMLHADPKERL---SAAEVLNHPW 326
++++ + RL + HP+
Sbjct: 318 RRLIC-SREHRLGQNGIEDFKKHPF 341
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353 | Back alignment and structure |
|---|
Score = 185 bits (471), Expect = 5e-54
Identities = 71/261 (27%), Positives = 122/261 (46%), Gaps = 14/261 (5%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG L K T + +A K + +I DDVE E +++ + +L
Sbjct: 28 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 87
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
++ + +M+ GG+L I G + E A ++ + + S G+++RDL
Sbjct: 88 SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDL 147
Query: 195 KPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADI 252
K +N + S + +K DFG+ G K G+ Y+APE++ YG D
Sbjct: 148 KLDNVMLDS---EGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDW 204
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
W+ GV+LY +L+G PF GE E +F +I+ ++ + P ++S A I K ++ P
Sbjct: 205 WAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY---P-KSMSKEAVAICKGLMTKHP 260
Query: 313 KERL-----SAAEVLNHPWMR 328
+RL ++ H + R
Sbjct: 261 GKRLGCGPEGERDIKEHAFFR 281
|
| >2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A Length = 207 | Back alignment and structure |
|---|
Score = 179 bits (456), Expect = 9e-54
Identities = 42/190 (22%), Positives = 81/190 (42%), Gaps = 16/190 (8%)
Query: 341 AVLTRMKQFRAMNKLKKVALKVIAE--NLSEEEIMGLKEMFKSMDTD--NSGTITFEELK 396
+++ K+ AM +++A + EE+ L E+FK + + + G I EE +
Sbjct: 3 CSVSKKKKKNAMRPPGYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQ 62
Query: 397 AGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITA-TMHMNRVEREEHLYKAFEYFD 455
L + R ++ + DV NG I++ EF+ + + E + AF+ +D
Sbjct: 63 LALFRNRNR-RNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYD 121
Query: 456 KDNSGYITMEELEHALKKYNMGDAKTIKE---------IIAEVDIDNDGRINYEEFAAMM 506
+G+I EEL+ + + E + D NDG+I+ +E+ +
Sbjct: 122 LRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFV 181
Query: 507 RKGNPDMVGN 516
NP ++ N
Sbjct: 182 SL-NPSLIKN 190
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337 | Back alignment and structure |
|---|
Score = 183 bits (466), Expect = 1e-53
Identities = 83/261 (31%), Positives = 131/261 (50%), Gaps = 15/261 (5%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG LV K T + +A K + +I +D+V E +++ + T H + LK
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALK 71
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
A++ + +M+ GGELF + + ++E A ++V+ + Y HS V++RD+
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI 131
Query: 195 KPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADI 252
K EN + D +K TDFGL G K G+ Y+APEVL N YG D
Sbjct: 132 KLENLMLDK---DGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDW 188
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
W GV++Y ++ G PF+ + + +F+ IL I F +S AK ++ +L DP
Sbjct: 189 WGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP----RTLSPEAKSLLAGLLKKDP 244
Query: 313 KERL-----SAAEVLNHPWMR 328
K+RL A EV+ H +
Sbjct: 245 KQRLGGGPSDAKEVMEHRFFL 265
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 188 bits (478), Expect = 4e-53
Identities = 76/272 (27%), Positives = 125/272 (45%), Gaps = 20/272 (7%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
NT+ R LG+G FG + T + +ACK + +++ R E QI+
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQIL-EKVN 242
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRI--IAKGHYSERAAANLCRQMVTVVHYC 184
R +V L AYE + ++ L++ L GG+L I + + + E A ++ +
Sbjct: 243 SRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDL 302
Query: 185 HSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR 244
H +++RDLKPEN L ++ +D GL+V G K VG+ Y+APEV++
Sbjct: 303 HRERIVYRDLKPENILLDD---HGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKN 359
Query: 245 N-YGAEADIWSAGVILYILLSGVPPFWGETEQS----IFDAILRGHIDFSSDPWPNISSS 299
Y D W+ G +LY +++G PF ++ + + ++S S
Sbjct: 360 ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYS----ERFSPQ 415
Query: 300 AKDIVKKMLHADPKERL-----SAAEVLNHPW 326
A+ + ++L DP ERL SA EV HP
Sbjct: 416 ARSLCSQLLCKDPAERLGCRGGSAREVKEHPL 447
|
| >2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208 | Back alignment and structure |
|---|
Score = 177 bits (451), Expect = 5e-53
Identities = 27/168 (16%), Positives = 62/168 (36%), Gaps = 21/168 (12%)
Query: 361 KVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE---------V 411
+ E+L + + L + F + D D+ G + +E+ ++ ++ ++ V
Sbjct: 24 QFNVEDLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAV 83
Query: 412 RQLMEAADVDGNGTIDYIEFITATMHMNRVEREEH-----------LYKAFEYFDKDNSG 460
R V+ + +++ A ERE ++ D D G
Sbjct: 84 RVFFLHKGVEPVNGLLREDWVEANRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDG 143
Query: 461 YITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508
+ ++EL+ +K +++ + D D G++ E + RK
Sbjct: 144 TVDVDELKTMMKAFDVPQE-AAYTFFEKADTDKSGKLERTELVHLFRK 190
|
| >2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208 | Back alignment and structure |
|---|
Score = 67.5 bits (165), Expect = 4e-13
Identities = 15/132 (11%), Positives = 45/132 (34%), Gaps = 10/132 (7%)
Query: 304 VKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFR-AMNKLKKVALKV 362
++++++A ++ + + ++ + + + + A + +
Sbjct: 65 MRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNG-------LLREDWVEANRVFAEAERER 117
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+ + +D D GT+ +ELK + + + E AD D
Sbjct: 118 ERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAFD--VPQEAAYTFFEKADTDK 175
Query: 423 NGTIDYIEFITA 434
+G ++ E +
Sbjct: 176 SGKLERTELVHL 187
|
| >2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208 | Back alignment and structure |
|---|
Score = 64.5 bits (157), Expect = 4e-12
Identities = 27/122 (22%), Positives = 42/122 (34%), Gaps = 13/122 (10%)
Query: 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE-------VRQLMEAA--- 418
E+ ++ F + + E+ E E + L +
Sbjct: 77 EKMRDAVRVFFLHKGVEPVNGLLREDWVEANRVFAEAERERERRGEPSLIALLSNSYYDV 136
Query: 419 -DVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG 477
D DG+GT+D E T + +E Y FE D D SG + EL H +K+ M
Sbjct: 137 LDDDGDGTVDVDELKTMMKAFD--VPQEAAYTFFEKADTDKSGKLERTELVHLFRKFWME 194
Query: 478 DA 479
Sbjct: 195 PY 196
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 179 bits (455), Expect = 2e-52
Identities = 67/273 (24%), Positives = 124/273 (45%), Gaps = 24/273 (8%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
LG+G +G+ Y + + A K I + + + E+ + HL H+NIV
Sbjct: 27 RVVLGKGTYGIVYAGRDLSNQVRIAIKEI---PERDSRYSQPLHEEIALHKHLK-HKNIV 82
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKG---HYSERAAANLCRQMVTVVHYCHSMG 188
+ G++ + + + M+ GG L + +K +E+ +Q++ + Y H
Sbjct: 83 QYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ 142
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLRRN-- 245
++HRD+K +N L ++ LK +DFG S + G+ Y+APE++ +
Sbjct: 143 IVHRDIKGDNVLINT--YSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPR 200
Query: 246 -YGAEADIWSAGVILYILLSGVPPFW--GETEQSIFDAILRGHIDFSSDPWP---NISSS 299
YG ADIWS G + + +G PPF+ GE + ++F + ++S+
Sbjct: 201 GYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMF------KVGMFKVHPEIPESMSAE 254
Query: 300 AKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332
AK + K DP +R A ++L +++V
Sbjct: 255 AKAFILKCFEPDPDKRACANDLLVDEFLKVSSK 287
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345 | Back alignment and structure |
|---|
Score = 180 bits (459), Expect = 2e-52
Identities = 73/271 (26%), Positives = 128/271 (47%), Gaps = 24/271 (8%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+GRG + LV K T + +A K + + + +D++ V+ E + + H +V L
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 76
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
++ + +++ GG+L + + E A ++ ++Y H G+++RDL
Sbjct: 77 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDL 136
Query: 195 KPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADI 252
K +N L S + +K TD+G+ +PGD G+ Y+APE+LR YG D
Sbjct: 137 KLDNVLLDS---EGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDW 193
Query: 253 WSAGVILYILLSGVPPFW---------GETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303
W+ GV+++ +++G PF TE +F IL I ++S A +
Sbjct: 194 WALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP----RSLSVKAASV 249
Query: 304 VKKMLHADPKERL------SAAEVLNHPWMR 328
+K L+ DPKERL A++ HP+ R
Sbjct: 250 LKSFLNKDPKERLGCHPQTGFADIQGHPFFR 280
|
| >2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B Length = 166 | Back alignment and structure |
|---|
Score = 174 bits (443), Expect = 2e-52
Identities = 36/154 (23%), Positives = 61/154 (39%), Gaps = 9/154 (5%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+ E EI KE F +D + G I ++L+ +G ++E M +
Sbjct: 15 VFSMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAM---IKEA 71
Query: 423 NGTIDYIEFITA-TMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT 481
+G I++ F+T + + E+ + AF+ D D G I LE L G T
Sbjct: 72 SGPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLT--TGGGRFT 129
Query: 482 ---IKEIIAEVDIDNDGRINYEEFAAMMRKGNPD 512
IK + A D G ++Y+ ++ G
Sbjct: 130 PEEIKNMWAAFPPDVAGNVDYKNICYVITHGEDA 163
|
| >2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B Length = 166 | Back alignment and structure |
|---|
Score = 80.3 bits (199), Expect = 5e-18
Identities = 21/82 (25%), Positives = 31/82 (37%), Gaps = 3/82 (3%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+ E+ I FK +D D G+I L+ L G R + E++ + A D
Sbjct: 88 LKGADPEDVI---MGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDV 144
Query: 423 NGTIDYIEFITATMHMNRVERE 444
G +DY H E E
Sbjct: 145 AGNVDYKNICYVITHGEDAEGE 166
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396 | Back alignment and structure |
|---|
Score = 181 bits (462), Expect = 3e-52
Identities = 78/326 (23%), Positives = 140/326 (42%), Gaps = 31/326 (9%)
Query: 27 HHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRE-------LGRGQ 79
HH + D P + + E + + G + +GRG
Sbjct: 5 HHHHHHDYDIPTTENLYFQGAMGSGIEEEKEAMNTRESGKASSSLGLQDFDLLRVIGRGS 64
Query: 80 FGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139
+ LV K T + +A + + + + +D++ V+ E + + H +V L ++
Sbjct: 65 YAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT 124
Query: 140 RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENF 199
+ +++ GG+L + + E A ++ ++Y H G+++RDLK +N
Sbjct: 125 ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNV 184
Query: 200 LFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADIWSAGV 257
L S + +K TD+G+ +PGD G+ Y+APE+LR YG D W+ GV
Sbjct: 185 LLDS---EGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGV 241
Query: 258 ILYILLSGVPPFW---------GETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKML 308
+++ +++G PF TE +F IL I ++S A ++K L
Sbjct: 242 LMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP----RSLSVKAASVLKSFL 297
Query: 309 HADPKERL------SAAEVLNHPWMR 328
+ DPKERL A++ HP+ R
Sbjct: 298 NKDPKERLGCHPQTGFADIQGHPFFR 323
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 177 bits (452), Expect = 4e-52
Identities = 58/267 (21%), Positives = 115/267 (43%), Gaps = 14/267 (5%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
F E+GRG F Y +T + A + RKL + + + + E +++ L H NI
Sbjct: 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQ-HPNI 87
Query: 131 VELKGAYED----RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
V ++E + + L+ +L G L + + + CRQ++ + + H+
Sbjct: 88 VRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHT 147
Query: 187 MG--VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR 244
++HRDLK +N + +K D GL+ K K ++G+ ++APE+
Sbjct: 148 RTPPIIHRDLKCDNIFIT--GPTGSVKIGDLGLATL-KRASFAKAVIGTPEFMAPEMYEE 204
Query: 245 NYGAEADIWSAGVILYILLSGVPPFWGETE-QSIFDAILRGHIDFSSDPWPNISSSAKDI 303
Y D+++ G+ + + + P+ I+ + G S K+I
Sbjct: 205 KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPAS--FDKVAIPEVKEI 262
Query: 304 VKKMLHADPKERLSAAEVLNHPWMRVD 330
++ + + ER S ++LNH + + +
Sbjct: 263 IEGCIRQNKDERYSIKDLLNHAFFQEE 289
|
| >2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} Length = 211 | Back alignment and structure |
|---|
Score = 175 bits (445), Expect = 4e-52
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 11/164 (6%)
Query: 359 ALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLG-TRLSESEVRQLMEA 417
++ + + +E F M SG T E K L G + + + Q+
Sbjct: 8 SIAGDQKAVPTQETHVWYRTF--MMEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQVYNT 65
Query: 418 ADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALK----- 472
D + +G +D++EFI A + + + E+ L F+ +D D +G I EL
Sbjct: 66 FDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQAL 125
Query: 473 --KYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGNPDMV 514
+ + + I + ++DI+NDG + EEF M K + D++
Sbjct: 126 NGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMAK-DQDLL 168
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674 | Back alignment and structure |
|---|
Score = 187 bits (475), Expect = 4e-52
Identities = 75/329 (22%), Positives = 136/329 (41%), Gaps = 19/329 (5%)
Query: 8 PSSQTQLHSTTADPDTGPGHHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKP-MEDVR 66
+ ++ + KI +A + + + + D
Sbjct: 285 EYFNVPVPPEGSEGNEELRQKFERAKIGQGTKAPEEKTANTISKFDNNGNRDRMKLTD-- 342
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
+ F LG+G FG L K T + +A K + +I DDVE E +++
Sbjct: 343 --FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK 400
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
+ +L ++ + +M+ GG+L I G + E A ++ + + S
Sbjct: 401 PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQS 460
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLRRN 245
G+++RDLK +N + S + +K DFG+ G K G+ Y+APE++
Sbjct: 461 KGIIYRDLKLDNVMLDS---EGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQ 517
Query: 246 -YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
YG D W+ GV+LY +L+G PF GE E +F +I+ ++ + ++S A I
Sbjct: 518 PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP----KSMSKEAVAIC 573
Query: 305 KKMLHADPKERL-----SAAEVLNHPWMR 328
K ++ P +RL ++ H + R
Sbjct: 574 KGLMTKHPGKRLGCGPEGERDIKEHAFFR 602
|
| >1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... Length = 156 | Back alignment and structure |
|---|
Score = 172 bits (438), Expect = 9e-52
Identities = 35/158 (22%), Positives = 79/158 (50%), Gaps = 11/158 (6%)
Query: 359 ALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAA 418
A + L +++I +KE F +D D G ++ E++KA +LG + E+ +++
Sbjct: 4 AASGVLTKLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK-- 61
Query: 419 DVDGNGTIDYIEFITA-TMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG 477
+ G +++ F++ + ++ + EE + AF FD+ + + +E ++ L+ NMG
Sbjct: 62 --EAPGPLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLE--NMG 117
Query: 478 DAKT---IKEIIAEVDIDNDGRINYEEFAAMMRKGNPD 512
D ++ E ++ G+ +Y +F AM++ +
Sbjct: 118 DNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKGSGEE 154
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327 | Back alignment and structure |
|---|
Score = 177 bits (452), Expect = 1e-51
Identities = 82/265 (30%), Positives = 135/265 (50%), Gaps = 19/265 (7%)
Query: 75 LGRGQFGVTYLVTH---KDTKQQFACKSISSRKLI-NRDDVEDVRREVQIMHHLTGHRNI 130
LG+G +G + V +T + FA K + ++ N D + E I+ + H I
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK-HPFI 83
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVM 190
V+L A++ + LI++ +GGELF ++ +G + E A ++ + + H G++
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGII 143
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLRRN-YGA 248
+RDLKPEN + + +K TDFGL G V G+ Y+APE+L R+ +
Sbjct: 144 YRDLKPENIMLNH---QGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNR 200
Query: 249 EADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKML 308
D WS G ++Y +L+G PPF GE + D IL+ ++ P P ++ A+D++KK+L
Sbjct: 201 AVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNL---P-PYLTQEARDLLKKLL 256
Query: 309 HADPKERL-----SAAEVLNHPWMR 328
+ RL A EV HP+ R
Sbjct: 257 KRNAASRLGAGPGDAGEVQAHPFFR 281
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 181 bits (460), Expect = 2e-51
Identities = 88/331 (26%), Positives = 148/331 (44%), Gaps = 22/331 (6%)
Query: 8 PSSQTQLHSTTADPDTGPGHHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKP--MEDV 65
+ + + TTA G PS ++ + M +
Sbjct: 91 ETPEEREEWTTAIQTVADGLKKQAAAEMDFRSGSPSDNSGAEEMEVSLAKPKHRVTMNE- 149
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
+ + + LG+G FG LV K T + +A K + ++ +D+V E +++ + +
Sbjct: 150 ---FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-S 205
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
H + LK +++ + +M+ GGELF + + +SE A ++V+ + Y H
Sbjct: 206 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 265
Query: 186 S-MGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLR 243
S V++RDLK EN + D +K TDFGL K G K G+ Y+APEVL
Sbjct: 266 SEKNVVYRDLKLENLMLDK---DGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLE 322
Query: 244 RN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302
N YG D W GV++Y ++ G PF+ + + +F+ IL I F + AK
Sbjct: 323 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP----RTLGPEAKS 378
Query: 303 IVKKMLHADPKERL-----SAAEVLNHPWMR 328
++ +L DPK+RL A E++ H +
Sbjct: 379 LLSGLLKKDPKQRLGGGSEDAKEIMQHRFFA 409
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 183 bits (465), Expect = 2e-51
Identities = 72/275 (26%), Positives = 125/275 (45%), Gaps = 23/275 (8%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
+ ++ R LGRG FG + K T + +ACK ++ ++L R + E +I+
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKIL-AKVH 243
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH----YSERAAANLCRQMVTVVH 182
R IV L A+E + + L+M + GG++ I + E A Q+V+ +
Sbjct: 244 SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDLVGSAYYVAPEV 241
+ H +++RDLKPEN L D ++ +D GL+V K G+ ++APE+
Sbjct: 304 HLHQRNIIYRDLKPENVLLDD---DGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPEL 360
Query: 242 LRRN-YGAEADIWSAGVILYILLSGVPPFWGETE----QSIFDAILRGHIDFSSDPWPNI 296
L Y D ++ GV LY +++ PF E + + +L + +
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP----DKF 416
Query: 297 SSSAKDIVKKMLHADPKERL-----SAAEVLNHPW 326
S ++KD + +L DP++RL S + HP
Sbjct: 417 SPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPL 451
|
| >3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325 | Back alignment and structure |
|---|
Score = 173 bits (442), Expect = 3e-50
Identities = 77/262 (29%), Positives = 126/262 (48%), Gaps = 19/262 (7%)
Query: 75 LGRGQFGVTYLVTH---KDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
LG+G FG +LV D +Q +A K + L RD V + E I+ H IV
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVR-TKMERDILVE-VNHPFIV 89
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
+L A++ + LI+D GG+LF R+ + ++E ++ + + HS+G+++
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIY 149
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAE 249
RDLKPEN L + +K TDFGLS G+ Y+APEV+ R +
Sbjct: 150 RDLKPENILLDE---EGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQS 206
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309
AD WS GV+++ +L+G PF G+ + IL+ + P +S A+ +++ +
Sbjct: 207 ADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGM---P-QFLSPEAQSLLRMLFK 262
Query: 310 ADPKERL-----SAAEVLNHPW 326
+P RL E+ H +
Sbjct: 263 RNPANRLGAGPDGVEEIKRHSF 284
|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174 | Back alignment and structure |
|---|
Score = 168 bits (427), Expect = 6e-50
Identities = 29/168 (17%), Positives = 55/168 (32%), Gaps = 20/168 (11%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTR--LSESEVRQLMEA-------- 417
S+ + +K F +D D G IT + ++ + + + LM++
Sbjct: 1 SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNF 60
Query: 418 -ADVDGNGTIDYIEFITATMHMNRVEREEHLYK-----AFEYFDKDNSGYITMEELEHAL 471
V G ID FI + M + + + + F D + I+ +E
Sbjct: 61 LTAVAGGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFF 120
Query: 472 KKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK---GNPDMVGN 516
+ +D +NDG ++ EEF + D
Sbjct: 121 GMLGLDKT-MAPASFDAIDTNNDGLLSLEEFVIAGSDFFMNDGDSTNK 167
|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174 | Back alignment and structure |
|---|
Score = 66.3 bits (162), Expect = 5e-13
Identities = 22/132 (16%), Positives = 40/132 (30%), Gaps = 14/132 (10%)
Query: 304 VKKMLHADPKERLSAAEVLNHPWMRVDGDAS-DKPLDIAVLTRMKQFRAMNKLKKVALKV 362
K + + L W + K +D F + V
Sbjct: 35 FAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDET------TFINS-----MKEMV 83
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
L F+++DT+ I+ +E LG L ++ +A D +
Sbjct: 84 KNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLG--LDKTMAPASFDAIDTNN 141
Query: 423 NGTIDYIEFITA 434
+G + EF+ A
Sbjct: 142 DGLLSLEEFVIA 153
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355 | Back alignment and structure |
|---|
Score = 172 bits (439), Expect = 2e-49
Identities = 85/325 (26%), Positives = 149/325 (45%), Gaps = 38/325 (11%)
Query: 35 DPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRE-------------LGRGQFG 81
+ G ++ TSA G L ++R + G LG G +G
Sbjct: 9 EEEGGSSGGAAGTSADGGDGGEQLLTVKHELRTANLTGHAEKVGIENFELLKVLGTGAYG 68
Query: 82 VTYLVTH---KDTKQQFACKSISSRKLINRD-DVEDVRREVQIMHHLTGHRNIVELKGAY 137
+LV DT + +A K + ++ + E R E Q++ H+ +V L A+
Sbjct: 69 KVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF 128
Query: 138 EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPE 197
+ ++LI+D GGELF + + ++E ++V + + H +G+++RD+K E
Sbjct: 129 QTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLE 188
Query: 198 NFLFSSSAEDSPLKATDFGLS--VFFKPGDVFKDLVGSAYYVAPEVLRRN---YGAEADI 252
N L S + + TDFGLS + D G+ Y+AP+++R + D
Sbjct: 189 NILLDS---NGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDW 245
Query: 253 WSAGVILYILLSGVPPFWGETEQS----IFDAILRGHIDFSSDPWPNISSSAKDIVKKML 308
WS GV++Y LL+G PF + E++ I IL+ + +S+ AKD+++++L
Sbjct: 246 WSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYP----QEMSALAKDLIQRLL 301
Query: 309 HADPKERL-----SAAEVLNHPWMR 328
DPK+RL A E+ H + +
Sbjct: 302 MKDPKKRLGCGPRDADEIKEHLFFQ 326
|
| >1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 Length = 204 | Back alignment and structure |
|---|
Score = 166 bits (422), Expect = 6e-49
Identities = 36/169 (21%), Positives = 69/169 (40%), Gaps = 20/169 (11%)
Query: 365 ENLSEEEIMGLKEMFKS-MDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
+ + L+E +K ++ SGT+ E K + V + A D +G+
Sbjct: 14 GAVGAADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGD 73
Query: 424 GTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALK----------- 472
TID++E++ A + R E L F+ +DKD +G I +EL ++
Sbjct: 74 NTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSV 133
Query: 473 -------KYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGNPDMV 514
+ + + I VD + DG+++ EF R+ + ++
Sbjct: 134 EVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARR-DKWVM 181
|
| >3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} Length = 143 | Back alignment and structure |
|---|
Score = 163 bits (414), Expect = 2e-48
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 10/147 (6%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
+ +I KE F +D + G I E+L L +G ++ + +M + G I
Sbjct: 1 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMS----EAPGPI 56
Query: 427 DYIEFITA-TMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---I 482
++ F+T +N + E+ + AF FD++ SG+I + L L MGD T +
Sbjct: 57 NFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLT--TMGDRFTDEEV 114
Query: 483 KEIIAEVDIDNDGRINYEEFAAMMRKG 509
E+ E ID G NY EF +++ G
Sbjct: 115 DEMYREAPIDKKGNFNYVEFTRILKHG 141
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Length = 191 | Back alignment and structure |
|---|
Score = 161 bits (409), Expect = 5e-47
Identities = 31/145 (21%), Positives = 60/145 (41%), Gaps = 9/145 (6%)
Query: 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGT 425
+ L E F+++DTD SG I+ EL A L G S + +L+ D + +G
Sbjct: 20 ARHMNDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGE 79
Query: 426 IDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKK--YNMGDAKTIK 483
I + EF + + + F D G + E+ AL Y + + +T +
Sbjct: 80 ITFDEFKDLHHFIL------SMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSE-QTFQ 132
Query: 484 EIIAEVDIDNDGRINYEEFAAMMRK 508
++ + D G + ++++ +
Sbjct: 133 ALMRKFDRQRRGSLGFDDYVELSIF 157
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Length = 191 | Back alignment and structure |
|---|
Score = 97.0 bits (242), Expect = 1e-23
Identities = 20/93 (21%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEF 431
I+ ++E F+ D+ G + E++A L G ++SE + LM D G++ + ++
Sbjct: 92 ILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDY 151
Query: 432 ITATMHMNRVEREEHLYKAFEYFDKDNSGYITM 464
+ ++ + R + F ++D++ +G +T
Sbjct: 152 VELSIFVCR------VRNVFAFYDRERTGQVTF 178
|
| >3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A Length = 229 | Back alignment and structure |
|---|
Score = 161 bits (409), Expect = 1e-46
Identities = 41/196 (20%), Positives = 81/196 (41%), Gaps = 17/196 (8%)
Query: 333 ASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITF 392
+ L+ +V ++ ++ + + L +++E+ L FK+ SG +
Sbjct: 27 LIEAGLEDSVEDELEMATVRHRPEALELLEAQSKFTKKELQILYRGFKNEC--PSGVVNE 84
Query: 393 EELKAGLPKLGTRLSESE-VRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAF 451
E K + + + L A D D NG + + +FI + R +E L AF
Sbjct: 85 ETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAF 144
Query: 452 EYFDKDNSGYITMEELEHALKK-YNMGDAKT------------IKEIIAEVDIDNDGRIN 498
+D + GYIT EE+ +K Y+M T ++ ++D + DG +
Sbjct: 145 NLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVT 204
Query: 499 YEEFAAMMRKGNPDMV 514
+EF +K + +++
Sbjct: 205 IDEFIESCQK-DENIM 219
|
| >2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} Length = 198 | Back alignment and structure |
|---|
Score = 160 bits (406), Expect = 1e-46
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 11/154 (7%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE-VRQLMEAADVDG 422
E LS E + F M SG +T E K S ++ V Q+ E D +
Sbjct: 8 VEELSATECHQWYKKF--MTECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNK 65
Query: 423 NGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYN------- 475
+G ID++E++ A + + + ++ L F+ +D D +G I EL + +K
Sbjct: 66 DGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNE 125
Query: 476 -MGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508
M + + ++DI+ DG ++ EEF ++K
Sbjct: 126 AMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQK 159
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191 | Back alignment and structure |
|---|
Score = 158 bits (402), Expect = 3e-46
Identities = 34/174 (19%), Positives = 66/174 (37%), Gaps = 26/174 (14%)
Query: 359 ALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPK-----LGTRLSESEVRQ 413
K+ ++ + I K MF +D +++G I+ +E+ LG +++ +
Sbjct: 2 NSKLTSDFDNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHK 61
Query: 414 LMEAADVDGNGT-----IDYIEFITATMHMNRVEREEH-----------LYKAFEYFDKD 457
A G G D+ +I + E E++ F+ DKD
Sbjct: 62 DAVEAFFGGAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKD 121
Query: 458 NSGYITMEELEHALKKYNMGDAKT---IKEIIAEVDIDNDGRINYEEFAAMMRK 508
+G IT++E + K G ++ +E DID G+++ +E
Sbjct: 122 QNGAITLDEWKAYTK--AAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHLG 173
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191 | Back alignment and structure |
|---|
Score = 87.6 bits (217), Expect = 3e-20
Identities = 33/159 (20%), Positives = 52/159 (32%), Gaps = 10/159 (6%)
Query: 296 ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQF-RAMNK 354
+ A DIV L A P++ + + G D + K
Sbjct: 38 MVYKASDIVINNLGATPEQA-KRHKDAVEAFFGGAGMKYGVETDW------PAYIEGWKK 90
Query: 355 LKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQL 414
L L+ A+N + +F +D D +G IT +E KA G S + +
Sbjct: 91 LATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEET 150
Query: 415 MEAADVDGNGTIDYIEFITATMH--MNRVEREEHLYKAF 451
D+D +G +D E + E LY
Sbjct: 151 FRVCDIDESGQLDVDEMTRQHLGFWYTMDPACEKLYGGA 189
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191 | Back alignment and structure |
|---|
Score = 62.1 bits (151), Expect = 2e-11
Identities = 9/83 (10%), Positives = 25/83 (30%), Gaps = 11/83 (13%)
Query: 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG------DAKTIKEIIAEVDIDNDG 495
F + D +++G I+++E+ + + + + E G
Sbjct: 13 RWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAG 72
Query: 496 -----RINYEEFAAMMRKGNPDM 513
++ + +K D
Sbjct: 73 MKYGVETDWPAYIEGWKKLATDE 95
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263 | Back alignment and structure |
|---|
Score = 161 bits (408), Expect = 4e-46
Identities = 34/178 (19%), Positives = 68/178 (38%), Gaps = 24/178 (13%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSES------EVRQLMEAADV 420
S E++ D D SG + +EL+ + +L ++ E++ ++
Sbjct: 10 SSLITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQ 69
Query: 421 DGNGTIDYIEFIT---------ATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHAL 471
+G I +E +++ E K + +D D+SG+I EEL++ L
Sbjct: 70 RDDGKIGIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFL 129
Query: 472 KKYNMGDAKT---------IKEIIAEVDIDNDGRINYEEFAAMMRKGNPDMVGNRRRK 520
K KT ++ D +NDG++ E A ++ ++ + K
Sbjct: 130 KDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIK 187
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263 | Back alignment and structure |
|---|
Score = 138 bits (349), Expect = 1e-37
Identities = 44/233 (18%), Positives = 91/233 (39%), Gaps = 34/233 (14%)
Query: 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVAL 360
+++++++L A K L + + + K + I L + + + L
Sbjct: 39 QNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGK-IGIVELAHVLP----TEENFLLL 93
Query: 361 KVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSES--------EVR 412
+ S EE M + ++ DTD+SG I EELK L L + +++
Sbjct: 94 FRCQQLKSCEEFM---KTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTD 150
Query: 413 QLMEAADVDGNGTIDYIEFIT--------ATMHMNRVEREEHLYKAFEYFDKDNSGYITM 464
+++ D + +G ++ E + KAFE +D+D +GYI
Sbjct: 151 LMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDE 210
Query: 465 EELEHALKKYNMGDAKTIKEIIAE--------VDIDNDGRINYEEFAAMMRKG 509
EL+ LK ++ + + I + + + G++ + A ++ G
Sbjct: 211 NELDALLK--DLCEKNKQELDINNISTYKKNIMALSDGGKLYRTDLALILSAG 261
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 162 bits (413), Expect = 4e-46
Identities = 85/322 (26%), Positives = 149/322 (46%), Gaps = 27/322 (8%)
Query: 27 HHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLV 86
HH +G+ + S T + R++ D R ++G G G+ L
Sbjct: 6 HHSSGVDLGTENLYFQSGVVTHEQFKAALRMVVDQ-GDPRLLLDSYVKIGEGSTGIVCLA 64
Query: 87 THKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146
K + +Q A K + L + E + EV IM H N+VE+ +Y + ++
Sbjct: 65 REKHSGRQVAVKMM---DLRKQQRRELLFNEVVIMRDYQ-HFNVVEMYKSYLVGEELWVL 120
Query: 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAE 206
M+ GG L D I+++ +E A +C ++ + Y H+ GV+HRD+K ++ L +
Sbjct: 121 MEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGR 179
Query: 207 DSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLS 264
+K +DFG + LVG+ Y++APEV+ R+ Y E DIWS G+++ ++
Sbjct: 180 ---VKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVD 236
Query: 265 GVPPFWGETEQSIFDAI-------LRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLS 317
G PP++ ++ + L+ S +D +++ML DP+ER +
Sbjct: 237 GEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPV--------LRDFLERMLVRDPQERAT 288
Query: 318 AAEVLNHPWMRVDGDASD-KPL 338
A E+L+HP++ G PL
Sbjct: 289 AQELLDHPFLLQTGLPECLVPL 310
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318 | Back alignment and structure |
|---|
Score = 162 bits (411), Expect = 7e-46
Identities = 70/305 (22%), Positives = 127/305 (41%), Gaps = 50/305 (16%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
E+G G G + + + T A K + R+ N+++ + + ++ ++ IV+
Sbjct: 32 EMGSGTCGQVWKMRFRKTGHVIAVKQM--RRSGNKEENKRILMDLDVVLKSHDCPYIVQC 89
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS-MGVMHR 192
G + V + M+L + +G ER + +V ++Y GV+HR
Sbjct: 90 FGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHR 149
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL-----VGSAYYVAPEVLRRN-- 245
D+KP N L + +K DFG+S G + D G A Y+APE +
Sbjct: 150 DVKPSNILLDERGQ---IKLCDFGIS-----GRLVDDKAKDRSAGCAAYMAPERIDPPDP 201
Query: 246 ----YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAI----------LRGHIDFSSD 291
Y AD+WS G+ L L +G P+ + ++ F+ + L GH+ FS D
Sbjct: 202 TKPDYDIRADVWSLGISLVELATGQFPY--KNCKTDFEVLTKVLQEEPPLLPGHMGFSGD 259
Query: 292 PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIA-----VLTRM 346
+ VK L D ++R ++L H +++ +D+A V+ +
Sbjct: 260 --------FQSFVKDCLTKDHRKRPKYNKLLEHSFIK---RYETLEVDVASWFKDVMAKT 308
Query: 347 KQFRA 351
+ R+
Sbjct: 309 ESPRS 313
|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Length = 172 | Back alignment and structure |
|---|
Score = 156 bits (397), Expect = 1e-45
Identities = 34/140 (24%), Positives = 60/140 (42%), Gaps = 10/140 (7%)
Query: 370 EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLG-TRLSESEVRQLMEAADVDGNGTIDY 428
+ L +F+ +D D SG I+ EL+ L T + VR ++ D + +++
Sbjct: 4 PDQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNF 63
Query: 429 IEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKK--YNMGDAKTIKEII 486
EF ++ F +D+DNSG I EL+ AL Y + D + +I
Sbjct: 64 SEFTGVWKYITD------WQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSD-QFHDILI 116
Query: 487 AEVDIDNDGRINYEEFAAMM 506
+ D G+I +++F
Sbjct: 117 RKFDRQGRGQIAFDDFIQGC 136
|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Length = 172 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 4e-25
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Query: 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEF 431
I + +F++ D DNSG I ELK L G RLS+ L+ D G G I + +F
Sbjct: 73 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 132
Query: 432 ITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELE 468
I + + R L F +D D G+I + +
Sbjct: 133 IQGCIVLQR------LTDIFRRYDTDQDGWIQVSYEQ 163
|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Length = 172 | Back alignment and structure |
|---|
Score = 78.0 bits (193), Expect = 5e-17
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 442 EREEHLYKAFEYFDKDNSGYITMEELEHALK--KYNMGDAKTIKEIIAEVDIDNDGRINY 499
+ L+ F+ DKD SG I+ EL+ AL + + T++ II+ D +N +N+
Sbjct: 4 PDQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNF 63
Query: 500 EEFAAMMRK 508
EF + +
Sbjct: 64 SEFTGVWKY 72
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348 | Back alignment and structure |
|---|
Score = 162 bits (411), Expect = 2e-45
Identities = 75/330 (22%), Positives = 129/330 (39%), Gaps = 23/330 (6%)
Query: 13 QLHSTTADPDTGPGHHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFG 72
+ D N P A S V + K +D +
Sbjct: 2 SYYHHHHHHDYDIPTTENLYFQGAMDPMPAGGRAGSLKDPDVAELFFK--DDPEKLFSDL 59
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
RE+G G FG Y + A K +S + + +D+ +EV+ + L H N ++
Sbjct: 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQ 118
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
+G Y H+ L+M+ C G + K E A + + + Y HS ++HR
Sbjct: 119 YRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHR 178
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL----RRNYGA 248
D+K N L S +K DFG + P + F VG+ Y++APEV+ Y
Sbjct: 179 DVKAGNILLSEPGL---VKLGDFGSASIMAPANSF---VGTPYWMAPEVILAMDEGQYDG 232
Query: 249 EADIWSAGVILYILLSGVPPFWGETE-QSIFDAILRGHIDFSSDP---WPNISSSAKDIV 304
+ D+WS G+ L PP + +++ HI + P + S ++ V
Sbjct: 233 KVDVWSLGITCIELAERKPPLFNMNAMSALY------HIAQNESPALQSGHWSEYFRNFV 286
Query: 305 KKMLHADPKERLSAAEVLNHPWMRVDGDAS 334
L P++R ++ +L H ++ + +
Sbjct: 287 DSCLQKIPQDRPTSEVLLKHRFVLRERPPT 316
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 159 bits (405), Expect = 3e-45
Identities = 76/284 (26%), Positives = 134/284 (47%), Gaps = 22/284 (7%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
D + Y ++G+G G Y T Q+ A + + L + E + E+ +M
Sbjct: 16 GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVMR 72
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVH 182
+ NIV +Y + ++M+ AGG L D ++ + E A +CR+ + +
Sbjct: 73 ENK-NPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALE 130
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEV 241
+ HS V+HRD+K +N L +K TDFG P + +VG+ Y++APEV
Sbjct: 131 FLHSNQVIHRDIKSDNILLGMDGS---VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV 187
Query: 242 LRRN-YGAEADIWSAGVILYILLSGVPPFWGETE-QSIFDAILRGHIDFSSDP----WPN 295
+ R YG + DIWS G++ ++ G PP+ E ++++ I + P
Sbjct: 188 VTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY------LIATNGTPELQNPEK 241
Query: 296 ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASD-KPL 338
+S+ +D + + L D ++R SA E+L H ++++ S PL
Sbjct: 242 LSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLSSLTPL 285
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176 | Back alignment and structure |
|---|
Score = 155 bits (394), Expect = 4e-45
Identities = 32/163 (19%), Positives = 58/163 (35%), Gaps = 24/163 (14%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL----GTRLSESEVRQLMEA------ 417
+ LK+ F D D +G + + + + G +EV+ L A
Sbjct: 2 TAIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFD 61
Query: 418 -----ADVDGNGTIDYIEFITATMHMNRVEREEH--------LYKAFEYFDKDNSGYITM 464
A V +G++ +FI T ++ + E + DK+ G I
Sbjct: 62 YLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINA 121
Query: 465 EELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507
+E L M A E +VD + +G ++ +E +R
Sbjct: 122 DEFAAWLTALGMSKA-EAAEAFNQVDTNGNGELSLDELLTAVR 163
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176 | Back alignment and structure |
|---|
Score = 67.9 bits (166), Expect = 2e-13
Identities = 23/142 (16%), Positives = 54/142 (38%), Gaps = 18/142 (12%)
Query: 353 NKLKKVALKVIAENLSEEEIMGLKE--------MFKSMDTDNSGTITFEELKAGLPKLGT 404
K + + ++ E+ LK + K + G++T E+ L
Sbjct: 30 EKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVTENLIF 89
Query: 405 RLSESE----VRQLMEAA----DVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDK 456
E+ + +++ D + +G I+ EF + + +AF D
Sbjct: 90 EQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG--MSKAEAAEAFNQVDT 147
Query: 457 DNSGYITMEELEHALKKYNMGD 478
+ +G ++++EL A++ ++ G
Sbjct: 148 NGNGELSLDELLTAVRDFHFGR 169
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176 | Back alignment and structure |
|---|
Score = 67.1 bits (164), Expect = 3e-13
Identities = 14/87 (16%), Positives = 30/87 (34%), Gaps = 16/87 (18%)
Query: 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKY------NMGDAK----------TIKEI 485
+ L K F+ +D D +G + + E + + G A+ +
Sbjct: 4 IASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYL 63
Query: 486 IAEVDIDNDGRINYEEFAAMMRKGNPD 512
E + +DG + E+F + +
Sbjct: 64 AKEAGVGSDGSLTEEQFIRVTENLIFE 90
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394 | Back alignment and structure |
|---|
Score = 162 bits (411), Expect = 4e-45
Identities = 80/329 (24%), Positives = 129/329 (39%), Gaps = 49/329 (14%)
Query: 36 PPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQF 95
P + + V GK E Y + +G G FGV + ++ +
Sbjct: 9 PLNGVKLNPLDDPNKVIKVLASDGKTGEQREIAYTNCKVIGNGSFGVVFQAKLVES-DEV 67
Query: 96 ACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK------GAYEDRHSVNLIMDL 149
A K + D RE+QIM + H N+V+LK G +D +NL+++
Sbjct: 68 AIKKV-------LQDKRFKNRELQIMRIVK-HPNVVDLKAFFYSNGDKKDEVFLNLVLEY 119
Query: 150 CAGGELFDRIIAKGHYSERAAANLCR----QMVTVVHYCHSMGVMHRDLKPENFLFSSSA 205
++ + L + Q++ + Y HS+G+ HRD+KP+N L
Sbjct: 120 V-PETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLD--P 176
Query: 206 EDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL--RRNYGAEADIWSAGVILYILL 263
LK DFG + G+ + S YY APE++ NY DIWS G ++ L+
Sbjct: 177 PSGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELM 236
Query: 264 SGVPPFWGETE----QSIFD-----------AILRGHIDFS-----SDPW-----PNISS 298
G P F GE+ I + +++ P+ P
Sbjct: 237 QGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPP 296
Query: 299 SAKDIVKKMLHADPKERLSAAEVLNHPWM 327
A D++ ++L P RL+A E L HP+
Sbjct: 297 DAIDLISRLLEYTPSARLTAIEALCHPFF 325
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327 | Back alignment and structure |
|---|
Score = 160 bits (406), Expect = 4e-45
Identities = 68/289 (23%), Positives = 121/289 (41%), Gaps = 38/289 (13%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
E+GRG +G + HK + Q A K I R ++ + + + ++ ++ + IV+
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRI--RSTVDEKEQKQLLMDLDVVMRSSDCPYIVQF 86
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAK------GHYSERAAANLCRQMVTVVHYCHSM 187
GA + M+L + FD+ E + V +++
Sbjct: 87 YGALFREGDCWICMELMSTS--FDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN 144
Query: 188 G-VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL-----VGSAYYVAPEV 241
++HRD+KP N L S +K DFG+S G + + G Y+APE
Sbjct: 145 LKIIHRDIKPSNILLDRSGN---IKLCDFGIS-----GQLVDSIAKTRDAGCRPYMAPER 196
Query: 242 L-----RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDA---ILRGHI-DFSSDP 292
+ R+ Y +D+WS G+ LY L +G P+ S+FD +++G S+
Sbjct: 197 IDPSASRQGYDVRSDVWSLGITLYELATGRFPY--PKWNSVFDQLTQVVKGDPPQLSNSE 254
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIA 341
S S + V L D +R E+L HP++ ++ +++A
Sbjct: 255 EREFSPSFINFVNLCLTKDESKRPKYKELLKHPFIL---MYEERAVEVA 300
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 158 bits (402), Expect = 9e-45
Identities = 71/294 (24%), Positives = 137/294 (46%), Gaps = 14/294 (4%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
D + ++G+G FG + T++ A K I + D++ED+++E+ ++
Sbjct: 18 ADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--AEDEIEDIQQEITVLS 75
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVH 182
+ + G+Y + +IM+ GG D ++ G E A + R+++ +
Sbjct: 76 QCD-SPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLD 133
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEV 241
Y HS +HRD+K N L S E +K DFG++ + ++ VG+ +++APEV
Sbjct: 134 YLHSEKKIHRDIKAANVLLSEHGE---VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEV 190
Query: 242 LRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300
++++ Y ++ADIWS G+ L G PP + I + + + S
Sbjct: 191 IKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNY---SKPL 247
Query: 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNK 354
K+ V+ L+ +P R +A E+L H + + +A ++ R K+++A
Sbjct: 248 KEFVEACLNKEPSFRPTAKELLKHKF--ILRNAKKTSYLTELIDRYKRWKAEQS 299
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166 | Back alignment and structure |
|---|
Score = 153 bits (388), Expect = 2e-44
Identities = 30/162 (18%), Positives = 54/162 (33%), Gaps = 26/162 (16%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEV---------------R 412
E + F + D D +G I + + + +
Sbjct: 2 YERR---IAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQ 58
Query: 413 QLMEAADVDGNGTIDYIEFITATMHMNRVEREE-------HLYKAFEYFDKDNSGYITME 465
L AD DG+ I EF+T + R + + L+ A D D G +T+
Sbjct: 59 GLAGIADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVA 118
Query: 466 ELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507
+ AL + + + ++ A +D D DG++ E
Sbjct: 119 DTARALTAFGVPED-LARQAAAALDTDGDGKVGETEIVPAFA 159
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166 | Back alignment and structure |
|---|
Score = 71.7 bits (176), Expect = 5e-15
Identities = 20/83 (24%), Positives = 27/83 (32%), Gaps = 16/83 (19%)
Query: 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKK----------------YNMGDAKTIKEI 485
E E + F FD+D +G+I + A K G + +
Sbjct: 1 EYERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGL 60
Query: 486 IAEVDIDNDGRINYEEFAAMMRK 508
D D D RI EEF K
Sbjct: 61 AGIADRDGDQRITREEFVTGAVK 83
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166 | Back alignment and structure |
|---|
Score = 67.1 bits (164), Expect = 2e-13
Identities = 19/70 (27%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
Query: 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNG 424
+ +E L DTD G +T + L G + E RQ A D DG+G
Sbjct: 90 DRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG--VPEDLARQAAAALDTDGDG 147
Query: 425 TIDYIEFITA 434
+ E + A
Sbjct: 148 KVGETEIVPA 157
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166 | Back alignment and structure |
|---|
Score = 62.1 bits (151), Expect = 1e-11
Identities = 24/107 (22%), Positives = 37/107 (34%), Gaps = 9/107 (8%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE---VRQLMEAA----DVDGNGTID 427
+ + D D IT EE G K + R + AA D DG+G +
Sbjct: 57 WQGLAGIADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVT 116
Query: 428 YIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY 474
+ A + V + +A D D G + E+ A +Y
Sbjct: 117 VADTARA-LTAFGVPEDL-ARQAAAALDTDGDGKVGETEIVPAFARY 161
|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A Length = 108 | Back alignment and structure |
|---|
Score = 150 bits (382), Expect = 3e-44
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 406 LSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITME 465
L +++V + A + + EF + + + + KAF D+D SG+I +
Sbjct: 6 LKDADVAAALAACS--AADSFKHKEFFAKVGLAS--KSLDDVKKAFYVIDQDKSGFIEED 61
Query: 466 ELEHALKKYNMG----DAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507
EL+ L+ ++ K +A+ D D DG I +EFAAM++
Sbjct: 62 ELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK 107
|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A Length = 108 | Back alignment and structure |
|---|
Score = 70.3 bits (173), Expect = 5e-15
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 361 KVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL---GTRLSESEVRQLMEA 417
KV + S ++ +K+ F +D D SG I +ELK L L+++E + +
Sbjct: 32 KVGLASKSLDD---VKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLAD 88
Query: 418 ADVDGNGTIDYIEFIT 433
D DG+G I EF
Sbjct: 89 GDKDGDGMIGVDEFAA 104
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 157 bits (399), Expect = 4e-44
Identities = 78/305 (25%), Positives = 130/305 (42%), Gaps = 43/305 (14%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR--REVQIMHHL 124
Y ++G G +GV + ++DT Q A K D V RE++++ L
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKF---LESEDDPVIKKIALREIRMLKQL 59
Query: 125 TGHRNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVH 182
H N+V L + + ++L+ + C DR + E ++ Q + V+
Sbjct: 60 K-HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRY--QRGVPEHLVKSITWQTLQAVN 116
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEV 241
+CH +HRD+KPEN L + + +K DFG + + P D + D V + +Y +PE+
Sbjct: 117 FCHKHNCIHRDVKPENILITKHSV---IKLCDFGFARLLTGPSDYYDDEVATRWYRSPEL 173
Query: 242 L--RRNYGAEADIWSAGVILYILLSGVPPFWGETE----QSIFDAI-------------L 282
L YG D+W+ G + LLSGVP + G+++ I +
Sbjct: 174 LVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTN 233
Query: 283 RGHIDFSSDPW----------PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332
+ PNIS A ++K LH DP ERL+ ++L+HP+ +
Sbjct: 234 QYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIRE 293
Query: 333 ASDKP 337
D
Sbjct: 294 IEDLA 298
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420 | Back alignment and structure |
|---|
Score = 159 bits (405), Expect = 5e-44
Identities = 80/353 (22%), Positives = 129/353 (36%), Gaps = 56/353 (15%)
Query: 12 TQLHSTTADPDTGPGHHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIF 71
T + + P P +K+ ++ + P +Y
Sbjct: 7 TTSFAESCKPVQQPSAF-GSMKVSRDKDGSKVTTVVATPGQG-------PDRPQEVSYTD 58
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
+ +G G FGV Y D+ + A K + D RE+QIM L H NIV
Sbjct: 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLD-HCNIV 110
Query: 132 ELK------GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR----QMVTVV 181
L+ G +D +NL++D ++ + + Q+ +
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYV-PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 169
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV 241
Y HS G+ HRD+KP+N L LK DFG + G+ + S YY APE+
Sbjct: 170 AYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 227
Query: 242 L--RRNYGAEADIWSAGVILYILLSGVPPFWGETE---------------QSIFDAILRG 284
+ +Y + D+WSAG +L LL G P F G++ + +
Sbjct: 228 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN 287
Query: 285 HIDFS-----SDPW-----PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
+ +F + PW P A + ++L P RL+ E H +
Sbjct: 288 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 340
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 157 bits (399), Expect = 5e-44
Identities = 73/325 (22%), Positives = 141/325 (43%), Gaps = 27/325 (8%)
Query: 44 SSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSR 103
S A+ + + S+ + + D + +G G +G Y H T Q A K +
Sbjct: 1 SMASDSPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD-- 58
Query: 104 KLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN------LIMDLCAGGELFD 157
+ D+ E++++E+ ++ + HRNI GA+ ++ L+M+ C G + D
Sbjct: 59 --VTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTD 116
Query: 158 --RIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDF 215
+ E A +CR+++ + + H V+HRD+K +N L + +AE +K DF
Sbjct: 117 LIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAE---VKLVDF 173
Query: 216 GLSVFFKPGDVFKD-LVGSAYYVAPEVLRRN------YGAEADIWSAGVILYILLSGVPP 268
G+S ++ +G+ Y++APEV+ + Y ++D+WS G+ + G PP
Sbjct: 174 GVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
Query: 269 FWGETEQSIFDAILRGHI-DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
I R S W S + ++ L + +R + +++ HP++
Sbjct: 234 LCDMHPMRALFLIPRNPAPRLKSKKW---SKKFQSFIESCLVKNHSQRPATEQLMKHPFI 290
Query: 328 RVDGDASD-KPLDIAVLTRMKQFRA 351
R + + + R K+ R
Sbjct: 291 RDQPNERQVRIQLKDHIDRTKKKRG 315
|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 Length = 109 | Back alignment and structure |
|---|
Score = 150 bits (380), Expect = 5e-44
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 8/108 (7%)
Query: 406 LSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITME 465
L ++ + + GT DY F + + + + FE DKD SG+I E
Sbjct: 6 LKADDINKAIS--AFKDPGTFDYKRFFHLVGLKGK--TDAQVKEVFEILDKDQSGFIEEE 61
Query: 466 ELEHALKKYNMG----DAKTIKEIIAEVDIDNDGRINYEEFAAMMRKG 509
EL+ LK ++ + K ++A D D+DG+I +EFA M+ +
Sbjct: 62 ELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQA 109
|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 Length = 109 | Back alignment and structure |
|---|
Score = 68.0 bits (167), Expect = 3e-14
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELK---AGLPKLGTRLSESEVRQLMEAADVDGNG 424
++ + +KE+F+ +D D SG I EELK G G L+++E + L+ A D D +G
Sbjct: 39 TDAQ---VKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDG 95
Query: 425 TIDYIEFIT 433
I EF
Sbjct: 96 KIGADEFAK 104
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290 | Back alignment and structure |
|---|
Score = 155 bits (394), Expect = 9e-44
Identities = 69/286 (24%), Positives = 121/286 (42%), Gaps = 36/286 (12%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
ELGRG +GV + H + Q A K I R +N + + + ++ I V
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRI--RATVNSQEQKRLLMDLDISMRTVDCPFTVTF 71
Query: 134 KGAYEDRHSVNLIMDLCAGG--ELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHS-MGV 189
GA V + M+L + + ++I K E + +V + + HS + V
Sbjct: 72 YGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 131
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL-----VGSAYYVAPEVLR- 243
+HRD+KP N L ++ + +K DFG+S G + D+ G Y+APE +
Sbjct: 132 IHRDVKPSNVLINALGQ---VKMCDFGIS-----GYLVDDVAKDIDAGCKPYMAPERINP 183
Query: 244 ----RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFD---AILRGHI-DFSSDPWPN 295
+ Y ++DIWS G+ + L P+ ++ + F ++ +D +
Sbjct: 184 ELNQKGYSVKSDIWSLGITMIELAILRFPY--DSWGTPFQQLKQVVEEPSPQLPADKF-- 239
Query: 296 ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIA 341
S+ D + L + KER + E++ HP+ K D+A
Sbjct: 240 -SAEFVDFTSQCLKKNSKERPTYPELMQHPFFT---LHESKGTDVA 281
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 154 bits (392), Expect = 3e-43
Identities = 79/284 (27%), Positives = 129/284 (45%), Gaps = 24/284 (8%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
D + ELG G FG Y +K+T A K I + +++ED E++I+
Sbjct: 15 LDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIE---TKSEEELEDYIVEIEILA 71
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRI-IAKGHYSERAAANLCRQMVTVV 181
H IV+L GAY + ++++ C GG + + +E +CRQM+ +
Sbjct: 72 TCD-HPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEAL 130
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPE 240
++ HS ++HRDLK N L + + ++ DFG+S +D +G+ Y++APE
Sbjct: 131 NFLHSKRIIHRDLKAGNVLMTLEGD---IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPE 187
Query: 241 VLRRN------YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP-- 292
V+ Y +ADIWS G+ L + PP E + +L I S P
Sbjct: 188 VVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHH---ELNPMRVLL--KIAKSDPPTL 242
Query: 293 --WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDAS 334
S +D +K L +P+ R SAA++L HP++
Sbjct: 243 LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNK 286
|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} Length = 202 | Back alignment and structure |
|---|
Score = 151 bits (383), Expect = 3e-43
Identities = 33/171 (19%), Positives = 68/171 (39%), Gaps = 27/171 (15%)
Query: 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGT 425
S+ ++ L F+++D + G ++ +L+ + L +++E+ DG+
Sbjct: 22 GFSQASLLRLHHRFRALDRNKKGYLSRMDLQQ-IGALA---VNPLGDRIIESFFPDGSQR 77
Query: 426 IDYIEFITATMHMNRVE-----------------REEHLYKAFEYFDKDNSGYITMEELE 468
+D+ F+ H VE R L+ AF+ +D D G I+ E+
Sbjct: 78 VDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEML 137
Query: 469 HALKK---YNMGDA---KTIKEIIAEVDIDNDGRINYEEFAAMMRKGNPDM 513
L+ + + + E D D DG +++ EF + K + +
Sbjct: 138 QVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEKMDVEQ 188
|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} Length = 202 | Back alignment and structure |
|---|
Score = 64.0 bits (156), Expect = 5e-12
Identities = 22/124 (17%), Positives = 48/124 (38%), Gaps = 10/124 (8%)
Query: 343 LTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL 402
+ + FR + L F+ D D G I+ E+ L +
Sbjct: 84 VRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLM 143
Query: 403 -GTRLSESEVRQL----MEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKD 457
G +++E ++ + ++ AD DG+G + ++EF + M+ VE++ +
Sbjct: 144 VGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEKMD-VEQKMSI----RILKHH 198
Query: 458 NSGY 461
+ +
Sbjct: 199 HHHH 202
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 154 bits (391), Expect = 6e-43
Identities = 55/259 (21%), Positives = 102/259 (39%), Gaps = 28/259 (10%)
Query: 88 HKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM 147
++ + + + L + ++ +++ M + +N V + + + M
Sbjct: 82 QEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFS-TKNTVGQLQPSSPKVYLYIQM 140
Query: 148 DLCAGGELFDRIIAKGHYSER---AAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSS 204
LC L D + + +R ++ Q+ V + HS G+MHRDLKP N F+
Sbjct: 141 QLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTM- 199
Query: 205 AEDSPLKATDFGLSVFFKPGDVFKDL-------------VGSAYYVAPEVLR-RNYGAEA 250
D +K DFGL + + + VG+ Y++PE + NY +
Sbjct: 200 --DDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKV 257
Query: 251 DIWSAGVILYILLSGVPPFWGETEQS-IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309
DI+S G+IL+ LL F + E+ I + + +V+ ML
Sbjct: 258 DIFSLGLILFELLY---SFSTQMERVRIITDVRNLKF---PLLFTQKYPQEHMMVQDMLS 311
Query: 310 ADPKERLSAAEVLNHPWMR 328
P ER A +++ +
Sbjct: 312 PSPTERPEATDIIENAIFE 330
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331 | Back alignment and structure |
|---|
Score = 154 bits (391), Expect = 8e-43
Identities = 79/305 (25%), Positives = 134/305 (43%), Gaps = 47/305 (15%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR----REVQIMH 122
Y +G G +G+ +KDT + A K K + DD + V+ RE++++
Sbjct: 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIK-----KFLESDDDKMVKKIAMREIKLLK 79
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTV 180
L H N+V L + + L+ + + + + Q++
Sbjct: 80 QLR-HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELF--PNGLDYQVVQKYLFQIING 136
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAP 239
+ +CHS ++HRD+KPEN L S S +K DFG + PG+V+ D V + +Y AP
Sbjct: 137 IGFCHSHNIIHRDIKPENILVSQSGV---VKLCDFGFARTLAAPGEVYDDEVATRWYRAP 193
Query: 240 EVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR--GHID------FS 289
E+L YG D+W+ G ++ + G P F G+++ I+ G++ F+
Sbjct: 194 ELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFN 253
Query: 290 SDPW-------------------PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330
+P P +S D+ KK LH DP +R AE+L+H + ++D
Sbjct: 254 KNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMD 313
Query: 331 GDASD 335
G A
Sbjct: 314 GFAER 318
|
| >2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A Length = 208 | Back alignment and structure |
|---|
Score = 150 bits (380), Expect = 9e-43
Identities = 41/188 (21%), Positives = 73/188 (38%), Gaps = 28/188 (14%)
Query: 350 RAMNKLKKVALKVIAE--NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLS 407
RA L+ L+ I + S +I L F S+D +GT++ E+ + L
Sbjct: 4 RASTLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAINPLG 63
Query: 408 ESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVE----------------REEHLYKAF 451
+ +++ A +G +++ F+ H +E R L+ AF
Sbjct: 64 D----RIINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAF 119
Query: 452 EYFDKDNSGYITMEELEHALKKY---NMGD---AKTIKEIIAEVDIDNDGRINYEEFAAM 505
+D D I+ +EL L+ N+ D I E D D D I++ EF +
Sbjct: 120 RLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKV 179
Query: 506 MRKGNPDM 513
+ K + +
Sbjct: 180 LEKVDVEQ 187
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329 | Back alignment and structure |
|---|
Score = 153 bits (390), Expect = 1e-42
Identities = 92/334 (27%), Positives = 136/334 (40%), Gaps = 51/334 (15%)
Query: 26 GHHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYL 85
HH L+ GP S SA + +S ++ Y +LG G +G Y
Sbjct: 6 HHHMGTLEAQTQGPGSMSVSAAPSATS---------IDR----YRRITKLGEGTYGEVYK 52
Query: 86 VTHKDTKQQFACKSISSRKLINRDDVEDVR--REVQIMHHLTGHRNIVELKGAYEDRHSV 143
T + A K I +L + ++ REV ++ L HRNI+ELK H +
Sbjct: 53 AIDTVTNETVAIKRI---RLEHEEEGVPGTAIREVSLLKELQ-HRNIIELKSVIHHNHRL 108
Query: 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSS 203
+LI + +L + S R + Q++ V++CHS +HRDLKP+N L S
Sbjct: 109 HLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSV 167
Query: 204 SAEDSP--LKATDFGLSVFF-KPGDVFKDLVGSAYYVAPEVL--RRNYGAEADIWSAGVI 258
S LK DFGL+ F P F + + +Y PE+L R+Y DIWS I
Sbjct: 168 SDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACI 227
Query: 259 LYILLSGVPPFWGETEQSIFDAILR--GHID------FSSDPW----------------- 293
+L P F G++E I G D ++ P
Sbjct: 228 WAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVL 287
Query: 294 -PNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
+ D++ ML DP +R+SA L HP+
Sbjct: 288 GALLDDEGLDLLTAMLEMDPVKRISAKNALEHPY 321
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272 | Back alignment and structure |
|---|
Score = 152 bits (384), Expect = 1e-42
Identities = 31/185 (16%), Positives = 67/185 (36%), Gaps = 30/185 (16%)
Query: 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE----------VRQLM 415
+ + G ++++ D D++G I +EL + +L + + M
Sbjct: 4 AFANLDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFM 63
Query: 416 EAADVDGNGTIDYIEF-----------ITATMHMNRVEREEHLYKAFEYFDKDNSGYITM 464
A D +G + E + ++ K + +D D+SGYI+
Sbjct: 64 SAYDATFDGRLQIEELANMILPQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISA 123
Query: 465 EELEHALKKYNMGDAKTI---------KEIIAEVDIDNDGRINYEEFAAMMRKGNPDMVG 515
EL++ LK + K I ++ D + DGR++ + A ++ ++
Sbjct: 124 AELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQENFLLQ 183
Query: 516 NRRRK 520
+
Sbjct: 184 FKMDA 188
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272 | Back alignment and structure |
|---|
Score = 129 bits (324), Expect = 4e-34
Identities = 45/241 (18%), Positives = 88/241 (36%), Gaps = 36/241 (14%)
Query: 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVAL 360
+ ++KK+ D ++ D + L I L M + +
Sbjct: 38 RHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGR-LQIEELANM--ILPQEENFLLIF 94
Query: 361 KVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSES--------EVR 412
+ A + E M ++++ D D+SG I+ ELK L L + +
Sbjct: 95 RREAPLDNSVEFM---KIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTD 151
Query: 413 QLMEAADVDGNGTIDYIEFIT------------ATMHMNRVEREEHLYKAFEYFDKDNSG 460
+M+ D + +G +D + ++VER+ K F ++D +G
Sbjct: 152 AMMKIFDKNKDGRLDLNDLARILALQENFLLQFKMDASSQVERKRDFEKIFAHYDVSRTG 211
Query: 461 YITMEELEHALKK--------YNMGDAKTIKE-IIAEVDIDNDGRINYEEFAAMMR-KGN 510
+ E++ +K + GD +E ++ D++ DG+I E A + K
Sbjct: 212 ALEGPEVDGFVKDMMELVRPSISGGDLDKFRECLLTHCDMNKDGKIQKSELALCLGLKHK 271
Query: 511 P 511
P
Sbjct: 272 P 272
|
| >2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} Length = 256 | Back alignment and structure |
|---|
Score = 151 bits (383), Expect = 1e-42
Identities = 43/261 (16%), Positives = 87/261 (33%), Gaps = 30/261 (11%)
Query: 270 WGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329
E ++ G++ P + + R W+
Sbjct: 4 TKEAVKASD-----GNLLGDPGRIPLSKRESIKWQRPRFTRQALMR-----CCLIKWILS 53
Query: 330 DGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGT 389
+ L L ++ + +++E+ L FK+ +G
Sbjct: 54 SAAPQGSDSSDSELELSTVRHQPEGLDQLQAQ---TKFTKKELQSLYRGFKNEC--PTGL 108
Query: 390 ITFEELKAGLPKLGTRLSESE-VRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLY 448
+ + K + + + L A D DGNG I + +F+ + R E L
Sbjct: 109 VDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLK 168
Query: 449 KAFEYFDKDNSGYITMEELEHALKK-YNMGDAKT------------IKEIIAEVDIDNDG 495
AF +D + G IT EE+ +K Y+M T ++ ++D + DG
Sbjct: 169 WAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDG 228
Query: 496 RINYEEFAAMMRKGNPDMVGN 516
+ +EF +K + +++ +
Sbjct: 229 VVTIDEFLETCQK-DENIMNS 248
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 152 bits (385), Expect = 3e-42
Identities = 71/292 (24%), Positives = 124/292 (42%), Gaps = 28/292 (9%)
Query: 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREV 118
P R+ Y +G G V K++ A K I+ K + ++++ +E+
Sbjct: 7 ALPWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEK--CQTSMDELLKEI 64
Query: 119 QIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFD--------RIIAKGHYSERAA 170
Q M H NIV ++ + + L+M L +GG + D G E
Sbjct: 65 QAMSQCH-HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTI 123
Query: 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF-FKPGDVFKD 229
A + R+++ + Y H G +HRD+K N L ++ DFG+S F GD+ ++
Sbjct: 124 ATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGS---VQIADFGVSAFLATGGDITRN 180
Query: 230 L-----VGSAYYVAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL 282
VG+ ++APEV+ + Y +ADIWS G+ L +G P+ + L
Sbjct: 181 KVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTL 240
Query: 283 RG------HIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ + S + ++ L DP++R +AAE+L H + +
Sbjct: 241 QNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ 292
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 151 bits (384), Expect = 5e-42
Identities = 74/339 (21%), Positives = 134/339 (39%), Gaps = 47/339 (13%)
Query: 33 KIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTK 92
+ PPR S + + + +LG G +G Y HK+T
Sbjct: 4 TVQLRNPPRRQLKKLDEDSLT---------KQPEEVFDVLEKLGEGSYGSVYKAIHKETG 54
Query: 93 QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152
Q A K + D++++ +E+ IM ++V+ G+Y + ++M+ C
Sbjct: 55 QIVAIKQVP-----VESDLQEIIKEISIMQQCD-SPHVVKYYGSYFKNTDLWIVMEYCGA 108
Query: 153 GELFDRI-IAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLK 211
G + D I + +E A + + + + Y H M +HRD+K N L ++ K
Sbjct: 109 GSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGH---AK 165
Query: 212 ATDFG----LSVFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGV 266
DFG L+ + +G+ +++APEV++ Y ADIWS G+ + G
Sbjct: 166 LADFGVAGQLTDTMAKRNTV---IGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
Query: 267 PPFWGETEQSIFDAI-------LRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAA 319
PP+ I R +S + D VK+ L P++R +A
Sbjct: 223 PPYADIHPMRAIFMIPTNPPPTFRKPELWSDN--------FTDFVKQCLVKSPEQRATAT 274
Query: 320 EVLNHPWMRVDGDASD-KPLDIAVLTRMKQFRAMNKLKK 357
++L HP++R S + L + + + +
Sbjct: 275 QLLQHPFVRSAKGVSILRDL----INEAMDVKLKRQESQ 309
|
| >1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A Length = 110 | Back alignment and structure |
|---|
Score = 143 bits (364), Expect = 1e-41
Identities = 26/109 (23%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
Query: 405 RLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITM 464
L ++++ ++A V G+ ++ +F A + + + + + K F+ D D SG+I
Sbjct: 6 LLKADDIKKALDA--VKAEGSFNHKKFF-ALVGLKAMSAND-VKKVFKAIDADASGFIEE 61
Query: 465 EELEHALKKYNMGDAK----TIKEIIAEVDIDNDGRINYEEFAAMMRKG 509
EEL+ LK + K + D D DG+I +EF ++ +
Sbjct: 62 EELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVHEA 110
|
| >1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A Length = 110 | Back alignment and structure |
|---|
Score = 80.7 bits (200), Expect = 9e-19
Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 6/105 (5%)
Query: 333 ASDKPLDIAVLTRMKQFRAMNKLKKVA-LKVIAENLSEEEIMGLKEMFKSMDTDNSGTIT 391
A D + + +A ++ +K++FK++D D SG I
Sbjct: 3 AKDLLKADDIKKALDAVKAEGSFNHKKFFALVGLKAMSAN--DVKKVFKAIDADASGFIE 60
Query: 392 FEELK---AGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFIT 433
EELK G L+++E + ++AAD DG+G I EF T
Sbjct: 61 EEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFET 105
|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 Length = 109 | Back alignment and structure |
|---|
Score = 143 bits (363), Expect = 2e-41
Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
Query: 402 LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGY 461
L++++V ++A + + +Y F + + + KAF D+D SG+
Sbjct: 3 FSGILADADVAAALKA--CEAADSFNYKAFFAKVGLTA--KSADDIKKAFFVIDQDKSGF 58
Query: 462 ITMEELEHALKKYNMG----DAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507
I +EL+ L+ ++ G K + D D DG I +E+AA+++
Sbjct: 59 IEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVDEWAALVK 108
|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 Length = 109 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 8e-15
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELK---AGLPKLGTRLSESEVRQLMEAADVDGNG 424
S ++ +K+ F +D D SG I +ELK L+++E + ++A D DG+G
Sbjct: 40 SADD---IKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDG 96
Query: 425 TIDYIEFIT 433
I E+
Sbjct: 97 AIGVDEWAA 105
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346 | Back alignment and structure |
|---|
Score = 150 bits (382), Expect = 2e-41
Identities = 75/294 (25%), Positives = 122/294 (41%), Gaps = 43/294 (14%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED-----VRREVQIM 121
Y LG GQF Y K+T Q A K I KL +R + +D RE++++
Sbjct: 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKI---KLGHRSEAKDGINRTALREIKLL 66
Query: 122 HHLTGHRNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVT 179
L+ H NI+ L A+ + +++L+ D + + +
Sbjct: 67 QELS-HPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKD--NSLVLTPSHIKAYMLMTLQ 123
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVA 238
+ Y H ++HRDLKP N L + LK DFGL+ F P + V + +Y A
Sbjct: 124 GLEYLHQHWILHRDLKPNNLLLDENGV---LKLADFGLAKSFGSPNRAYTHQVVTRWYRA 180
Query: 239 PEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETE----QSIFDAI----------- 281
PE+L R YG D+W+ G IL LL VP G+++ IF+ +
Sbjct: 181 PELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM 240
Query: 282 --LRGHIDFSSDP-------WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
L ++ F S P + D+++ + +P R++A + L +
Sbjct: 241 CSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKY 294
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360 | Back alignment and structure |
|---|
Score = 150 bits (381), Expect = 4e-41
Identities = 77/351 (21%), Positives = 127/351 (36%), Gaps = 59/351 (16%)
Query: 33 KIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTK 92
+++ R A VG + +D + ELG G GV + V+HK +
Sbjct: 6 ELELDEQQRKRLEAFLTQKQKVGEL---KDDD----FEKISELGAGNGGVVFKVSHKPSG 58
Query: 93 QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG 152
A K I I + RE+Q++H IV GA+ +++ M+ G
Sbjct: 59 LVMARKLI--HLEIKPAIRNQIIRELQVLHECN-SPYIVGFYGAFYSDGEISICMEHMDG 115
Query: 153 GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG-VMHRDLKPENFLFSSSAEDSPLK 211
G L + G E+ + ++ + Y +MHRD+KP N L +S E +K
Sbjct: 116 GSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE---IK 172
Query: 212 ATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPF- 269
DFG+S + VG+ Y++PE L+ Y ++DIWS G+ L + G P
Sbjct: 173 LCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIP 231
Query: 270 -------------------WGETEQSIFDAILRGHIDFSSDPWPNI-------------- 296
+ S P I
Sbjct: 232 PPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPK 291
Query: 297 ------SSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIA 341
S +D V K L +P ER +++ H +++ + + +D A
Sbjct: 292 LPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK---RSDAEEVDFA 339
|
| >2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A Length = 186 | Back alignment and structure |
|---|
Score = 144 bits (366), Expect = 6e-41
Identities = 23/175 (13%), Positives = 53/175 (30%), Gaps = 21/175 (12%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSES---------EVRQ 413
I E+ + +K + +D G I+ E+ + ++ S E +
Sbjct: 4 ITESERAYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLR 63
Query: 414 LMEAADVDGNGTIDYIEFITATMHM-------NRVEREEHLYKAFEYFDKDNSGYITMEE 466
+ + + I E + ++ D D GY+++ E
Sbjct: 64 VADQLGLAPGVRISVEEAAVNATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPE 123
Query: 467 LEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK----GNPDMVGN 516
+ L+ +D + +G+I+ +EF + + N
Sbjct: 124 FKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVNDFLFGLEETALAN 178
|
| >2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A Length = 186 | Back alignment and structure |
|---|
Score = 75.2 bits (185), Expect = 6e-16
Identities = 21/83 (25%), Positives = 33/83 (39%)
Query: 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDY 428
++ M+ +DTD G ++ E KA L +G L++ + D + NG I
Sbjct: 98 AMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISR 157
Query: 429 IEFITATMHMNRVEREEHLYKAF 451
EF+ E L AF
Sbjct: 158 DEFLVTVNDFLFGLEETALANAF 180
|
| >2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} Length = 190 | Back alignment and structure |
|---|
Score = 144 bits (364), Expect = 1e-40
Identities = 42/183 (22%), Positives = 77/183 (42%), Gaps = 19/183 (10%)
Query: 350 RAMNKLKKVALKVIAE--NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLS 407
++ +KL + L+ + ++E+ + F SG + E + +
Sbjct: 3 KSQSKLSQDQLQDLVRSTRFDKKELQQWYKGFF--KDCPSGHLNKSEFQKIYKQFFPFGD 60
Query: 408 ESE-VRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEE 466
S + D D NG ID+ EFI A +R E + L AF+ +D DN+G I+ +E
Sbjct: 61 PSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDE 120
Query: 467 LEHALKK-YNMGDA------------KTIKEIIAEVDIDNDGRINYEEFAAMMRKGNPDM 513
+ + Y M + K + +I +D + DG++ EEF ++ +P +
Sbjct: 121 MLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKR-DPTI 179
Query: 514 VGN 516
V
Sbjct: 180 VSA 182
|
| >1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 Length = 193 | Back alignment and structure |
|---|
Score = 144 bits (364), Expect = 1e-40
Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 19/178 (10%)
Query: 353 NKLKKVALKVIAE--NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE 410
+KL+ ++ + E + +E EI + F SG ++ EE K S+
Sbjct: 6 SKLRPEVMQDLLESTDFTEHEIQEWYKGFL--RDCPSGHLSMEEFKKIYGNFFPYGDASK 63
Query: 411 -VRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEH 469
+ D +G+GTID+ EFI A +R + E+ L AF +D D +GYI+ E+
Sbjct: 64 FAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLE 123
Query: 470 ALKK-YNMGDA------------KTIKEIIAEVDIDNDGRINYEEFAAMMRKGNPDMV 514
++ Y M + K ++I ++D + DG+++ EEF + +P +V
Sbjct: 124 IVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKS-DPSIV 180
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317 | Back alignment and structure |
|---|
Score = 147 bits (374), Expect = 2e-40
Identities = 77/305 (25%), Positives = 118/305 (38%), Gaps = 58/305 (19%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED-----VRREVQIM 121
+ + +LG G + Y +K T A K + + D E+ RE+ +M
Sbjct: 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEV-------KLDSEEGTPSTAIREISLM 57
Query: 122 HHLTGHRNIVELKGAYEDRHSVNLIM-----DLCAGGELFDRIIAKGHYSERAAANLCRQ 176
L H NIV L + + L+ DL + Q
Sbjct: 58 KELK-HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQ 116
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAY 235
++ + +CH ++HRDLKP+N L + + LK DFGL+ F P + F V + +
Sbjct: 117 LLQGLAFCHENKILHRDLKPQNLLINKRGQ---LKLGDFGLARAFGIPVNTFSSEVVTLW 173
Query: 236 YVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQS----IFDAI-------- 281
Y AP+VL R Y DIWS G IL +++G P F G ++ IFD +
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLW 233
Query: 282 --------------------LRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEV 321
LR + + D + +L +P RLSA +
Sbjct: 234 PSVTKLPKYNPNIQQRPPRDLRQV--LQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQA 291
Query: 322 LNHPW 326
L+HPW
Sbjct: 292 LHHPW 296
|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} PDB: 2kqy_A Length = 109 | Back alignment and structure |
|---|
Score = 140 bits (355), Expect = 2e-40
Identities = 26/110 (23%), Positives = 50/110 (45%), Gaps = 8/110 (7%)
Query: 402 LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGY 461
+ LS ++ + + + +Y F + + + + + K F D+D SG+
Sbjct: 3 ITDILSAKDIESALSS--CQAADSFNYKSFFSTVGLSS--KTPDQIKKVFGILDQDKSGF 58
Query: 462 ITMEELEHALKKYNMG----DAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507
I EEL+ LK ++ + K +A D D DG+I EEF ++++
Sbjct: 59 IEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK 108
|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} PDB: 2kqy_A Length = 109 | Back alignment and structure |
|---|
Score = 69.2 bits (170), Expect = 1e-14
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGT---RLSESEVRQLMEAADVDGNG 424
+ ++ +K++F +D D SG I EEL+ L + L+ +E + + A D DG+G
Sbjct: 40 TPDQ---IKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDG 96
Query: 425 TIDYIEFIT 433
I EF +
Sbjct: 97 KIGVEEFQS 105
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 148 bits (376), Expect = 3e-40
Identities = 66/369 (17%), Positives = 128/369 (34%), Gaps = 64/369 (17%)
Query: 63 EDVRNTYIFGRELGRGQ--FGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
Y +G+G L +K T + + I+ + + V ++ E+ +
Sbjct: 21 LPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEA-CSNEMVTFLQGELHV 79
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMV 178
H NIV + + + + ++ A G D +E A A + + ++
Sbjct: 80 SKLFN-HPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVL 138
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF--------KPGDVFKDL 230
+ Y H MG +HR +K + L S + + + ++ D K
Sbjct: 139 KALDYIHHMGYVHRSVKASHILISVDGK---VYLSGLRSNLSMISHGQRQRVVHDFPKYS 195
Query: 231 VGSAYYVAPEVLRRN---YGAEADIWSAGVILYILLSGVPPF------------------ 269
V +++PEVL++N Y A++DI+S G+ L +G PF
Sbjct: 196 VKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVP 255
Query: 270 ------------------WGETEQSIFDAILRGHIDFSSDPWPNI------SSSAKDIVK 305
+ D++ S+ P+ S V+
Sbjct: 256 CLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVE 315
Query: 306 KMLHADPKERLSAAEVLNHPWMRVDGDASDKPLD--IAVLTRMKQFRAMNKLKKVALKVI 363
+ L +P R SA+ +LNH + + + + L + +T + F + +
Sbjct: 316 QCLQRNPDARPSASTLLNHSFFKQIKRRASEALPELLRPVTPITNFEGSQSQDHSGIFGL 375
Query: 364 AENLSEEEI 372
NL E E+
Sbjct: 376 VTNLEELEV 384
|
| >3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A Length = 450 | Back alignment and structure |
|---|
Score = 149 bits (378), Expect = 5e-40
Identities = 63/148 (42%), Positives = 88/148 (59%), Gaps = 6/148 (4%)
Query: 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNG 424
+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGNG
Sbjct: 304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 363
Query: 425 TIDYIEFIT-ATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT-- 481
TID+ EF+T M + EE + +AF FDKD +GYI+ EL H + N+G+ T
Sbjct: 364 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDE 421
Query: 482 -IKEIIAEVDIDNDGRINYEEFAAMMRK 508
+ E+I E DID DG++NYEEF MM
Sbjct: 422 EVDEMIREADIDGDGQVNYEEFVQMMTA 449
|
| >3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A Length = 450 | Back alignment and structure |
|---|
Score = 93.0 bits (231), Expect = 2e-20
Identities = 36/145 (24%), Positives = 58/145 (40%), Gaps = 12/145 (8%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
G + D+ T E+K L R+ + D +G I
Sbjct: 241 FKSAMPEGYIQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGI-------DFKEDGNI 293
Query: 427 DYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---IK 483
+ T E+ +AF FDKD G IT +EL ++ ++G T ++
Sbjct: 294 LGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQ 351
Query: 484 EIIAEVDIDNDGRINYEEFAAMMRK 508
++I EVD D +G I++ EF MM +
Sbjct: 352 DMINEVDADGNGTIDFPEFLTMMAR 376
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292 | Back alignment and structure |
|---|
Score = 145 bits (368), Expect = 7e-40
Identities = 74/285 (25%), Positives = 128/285 (44%), Gaps = 42/285 (14%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR--REVQIMHHLTGHRNIVE 132
+G G +G + +++T + A K + +L + D+ RE+ ++ L H+NIV
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRV---RLDDDDEGVPSSALREICLLKELK-HKNIVR 65
Query: 133 LKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVM 190
L + L+ + C + FD G + Q++ + +CHS V+
Sbjct: 66 LHDVLHSDKKLTLVFEFCDQDLKKYFDSC--NGDLDPEIVKSFLFQLLKGLGFCHSRNVL 123
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVL--RRNYG 247
HRDLKP+N L + + E LK +FGL+ F P + V + +Y P+VL + Y
Sbjct: 124 HRDLKPQNLLINRNGE---LKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYS 180
Query: 248 AEADIWSAGVILYILLS-GVPPFWGETE----QSIFDAI-------------LRGHIDFS 289
D+WSAG I L + G P F G + IF + L + +
Sbjct: 181 TSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYP 240
Query: 290 SDP--------WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
P P ++++ +D+++ +L +P +R+SA E L HP+
Sbjct: 241 MYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPY 285
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324 | Back alignment and structure |
|---|
Score = 145 bits (369), Expect = 9e-40
Identities = 76/303 (25%), Positives = 118/303 (38%), Gaps = 63/303 (20%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED-----VRREVQIM 121
TYI +LG G + Y K T A K I R + E+ REV ++
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEI-------RLEHEEGAPCTAIREVSLL 54
Query: 122 HHLTGHRNIVELKGAYEDRHSVNLIMDLC---------AGGELFDRIIAKGHYSERAAAN 172
L H NIV L S+ L+ + G + + K
Sbjct: 55 KDLK-HANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVK---------L 104
Query: 173 LCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLV 231
Q++ + YCH V+HRDLKP+N L + E LK DFGL+ P + + V
Sbjct: 105 FLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGE---LKLADFGLARAKSIPTKTYDNEV 161
Query: 232 GSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQS----IF------- 278
+ +Y P++L +Y + D+W G I Y + +G P F G T + IF
Sbjct: 162 VTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPT 221
Query: 279 DAILRGHIDFS---------------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323
+ G + P + S D++ K+L + + R+SA + +
Sbjct: 222 EETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281
Query: 324 HPW 326
HP+
Sbjct: 282 HPF 284
|
| >2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 145 | Back alignment and structure |
|---|
Score = 139 bits (353), Expect = 2e-39
Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 10/147 (6%)
Query: 370 EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYI 429
++E F+ D DN G ++ EEL + L LG + +E+ + + D
Sbjct: 2 ASADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKE---FDLA 58
Query: 430 EFIT--ATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---IKE 484
F T E+ + + AF DK+ +G I EL L N+GDA T ++E
Sbjct: 59 TFKTVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLL--NLGDALTSSEVEE 116
Query: 485 IIAEVDIDNDGRINYEEFAAMMRKGNP 511
++ EV + DG INYE F M+ G P
Sbjct: 117 LMKEVSVSGDGAINYESFVDMLVTGYP 143
|
| >2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 145 | Back alignment and structure |
|---|
Score = 77.2 bits (191), Expect = 4e-17
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 358 VALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEA 417
+ +E+ + F+++D + +GTI EL+ L LG L+ SEV +LM+
Sbjct: 64 YRKPIKTPTEQSKEM---LDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKE 120
Query: 418 ADVDGNGTIDYIEFITATMH 437
V G+G I+Y F+ +
Sbjct: 121 VSVSGDGAINYESFVDMLVT 140
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288 | Back alignment and structure |
|---|
Score = 142 bits (360), Expect = 9e-39
Identities = 80/290 (27%), Positives = 125/290 (43%), Gaps = 42/290 (14%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR--REVQIMHHLTG 126
Y ++G G +GV Y + + FA K I +L D+ RE+ I+ L
Sbjct: 4 YHGLEKIGEGTYGVVYKAQNN-YGETFALKKI---RLEKEDEGIPSTTIREISILKELK- 58
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYC 184
H NIV+L + + L+ + +L D +G A + Q++ + YC
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYC 116
Query: 185 HSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVL- 242
H V+HRDLKP+N L + E LK DFGL+ F P + + + +Y AP+VL
Sbjct: 117 HDRRVLHRDLKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLM 173
Query: 243 -RRNYGAEADIWSAGVILYILLSGVPPFWGETE----QSIFDAI-------------LRG 284
+ Y DIWS G I +++G P F G +E IF + L
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK 233
Query: 285 -HIDFSSDP-------WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
+F+ + S D++ KML DP +R++A + L H +
Sbjct: 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311 | Back alignment and structure |
|---|
Score = 141 bits (359), Expect = 2e-38
Identities = 76/293 (25%), Positives = 118/293 (40%), Gaps = 43/293 (14%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR--REVQIMHHL 124
Y ++G G +GV Y + A K I +L D+ RE+ ++ L
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRI---RLDAEDEGIPSTAIREISLLKEL 76
Query: 125 TGHRNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVH 182
H NIV L + L+ + ++ D K + Q++ V
Sbjct: 77 H-HPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDEN--KTGLQDSQIKIYLYQLLRGVA 133
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEV 241
+CH ++HRDLKP+N L +S LK DFGL+ F P + V + +Y AP+V
Sbjct: 134 HCHQHRILHRDLKPQNLLINSDGA---LKLADFGLARAFGIPVRSYTHEVVTLWYRAPDV 190
Query: 242 L--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQS----IFDAI-------------L 282
L + Y DIWS G I +++G P F G T+ IF + L
Sbjct: 191 LMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQEL 250
Query: 283 RGHIDFSSDPW---------PNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
+ + P D++ ML DP +R+SA + +NHP+
Sbjct: 251 PLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPY 303
|
| >1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 87 | Back alignment and structure |
|---|
Score = 134 bits (339), Expect = 3e-38
Identities = 52/77 (67%), Positives = 65/77 (84%)
Query: 361 KVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADV 420
K +AE LSEEEI GLKE+FK +DTDNSGTITF+ELK GL ++G+ L ESE++ LM+AAD+
Sbjct: 11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADI 70
Query: 421 DGNGTIDYIEFITATMH 437
D +GTIDY EFI AT+H
Sbjct: 71 DKSGTIDYGEFIAATVH 87
|
| >1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 87 | Back alignment and structure |
|---|
Score = 92.6 bits (231), Expect = 3e-23
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 421 DGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY--NMGD 478
+G ID + A ++ E L + F+ D DNSG IT +EL+ LK+ + +
Sbjct: 1 HSSGHIDDDDKHMAE-RLSEEEIGG-LKELFKMIDTDNSGTITFDELKDGLKRVGSELME 58
Query: 479 AKTIKEIIAEVDIDNDGRINYEEFAAMM 506
++ IK+++ DID G I+Y EF A
Sbjct: 59 SE-IKDLMDAADIDKSGTIDYGEFIAAT 85
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308 | Back alignment and structure |
|---|
Score = 141 bits (357), Expect = 3e-38
Identities = 75/300 (25%), Positives = 115/300 (38%), Gaps = 49/300 (16%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR-----REVQIM 121
+ Y E+G G +G Y + A KS+ ++ N REV ++
Sbjct: 9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV---RVPNGGGGGGGLPISTVREVALL 65
Query: 122 HHL--TGHRNIVELK-----GAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAAN 172
L H N+V L + V L+ + D+ G +
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG-LPAETIKD 124
Query: 173 LCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVG 232
L RQ + + + H+ ++HRDLKPEN L +S +K DFGL+ + +V
Sbjct: 125 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGGT---VKLADFGLARIYSYQMALTPVVV 181
Query: 233 SAYYVAPEVL-RRNYGAEADIWSAGVILYILLSGVPPFWGETEQS----IFDAILRGHID 287
+ +Y APEVL + Y D+WS G I + P F G +E IFD L G
Sbjct: 182 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFD--LIGLPP 239
Query: 288 ------FSSDPW---------------PNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
S P P + S ++ +ML +P +R+SA L H +
Sbjct: 240 EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSY 299
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 140 bits (354), Expect = 5e-38
Identities = 65/270 (24%), Positives = 117/270 (43%), Gaps = 25/270 (9%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDD----VEDVRREVQIMHHLTG 126
+ +++G+G FG+ + K A KS+ + ++ +REV IM +L
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN- 81
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH-YSERAAANLCRQMVTVVHYCH 185
H NIV+L G + ++M+ G+L+ R++ K H L + + Y
Sbjct: 82 HPNIVKLYGLMHN--PPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 186 SMG--VMHRDLKPENFLFSSSAEDSP--LKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV 241
+ ++HRDL+ N S E++P K DFGLS L+G+ ++APE
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSV--HSVSGLLGNFQWMAPET 197
Query: 242 LR---RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298
+ +Y +AD +S +ILY +L+G PF + I + P I
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLR----PTIPE 253
Query: 299 SA----KDIVKKMLHADPKERLSAAEVLNH 324
+++++ DPK+R + ++
Sbjct: 254 DCPPRLRNVIELCWSGDPKKRPHFSYIVKE 283
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 140 bits (356), Expect = 5e-38
Identities = 62/306 (20%), Positives = 123/306 (40%), Gaps = 34/306 (11%)
Query: 42 PSSSATSATSSSVGRVLGKPMEDVRNTYI------FGRELGRGQFGVTYLVTHKDTKQQF 95
P + + ++ S R + ++ I G +G+G+FG Y +
Sbjct: 2 PEMNLSLLSARSFPRKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWH---GEV 58
Query: 96 ACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGEL 155
A + I + N D ++ +REV H N+V GA + +I LC G L
Sbjct: 59 AIRLIDIERD-NEDQLKAFKREVMAYRQTR-HENVVLFMGACMSPPHLAIITSLCKGRTL 116
Query: 156 FDRI-IAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATD 214
+ + AK + +++V + Y H+ G++H+DLK +N + ++ + TD
Sbjct: 117 YSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY----DNGKVVITD 172
Query: 215 FGLSVFFKP------GDVFKDLVGSAYYVAPEVLRRN----------YGAEADIWSAGVI 258
FGL D + G ++APE++R+ + +D+++ G I
Sbjct: 173 FGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTI 232
Query: 259 LYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSA 318
Y L + PF + ++I + G + + DI+ + +ER +
Sbjct: 233 WYELHAREWPFKTQPAEAIIWQMGTGMK--PNLSQIGMGKEISDILLFCWAFEQEERPTF 290
Query: 319 AEVLNH 324
++++
Sbjct: 291 TKLMDM 296
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330 | Back alignment and structure |
|---|
Score = 140 bits (356), Expect = 7e-38
Identities = 67/308 (21%), Positives = 121/308 (39%), Gaps = 61/308 (19%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
++ Y R+LGRG++ + + ++ + K++ + ++RE++I+ +
Sbjct: 33 GNQDDYQLVRKLGRGKYSEVFEAINITNNEKVV---V---KILKPVKKKKIKREIKILEN 86
Query: 124 LTGHRNIVELKGAYEDRHSVNLI--------MDLCAGGELFDRIIAKGHYSERAAANLCR 175
L G NI+ L +D S D ++ ++
Sbjct: 87 LRGGPNIITLADIVKDPVSRTPALVFEHVNNTDF-------KQLYQT--LTDYDIRFYMY 137
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY 235
+++ + YCHSMG+MHRD+KP N + L+ D+GL+ F+ PG + V S Y
Sbjct: 138 EILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNVRVASRY 195
Query: 236 YVAPEVL--RRNYGAEADIWSAGVILYILLSGVPP-FWGETEQSIFDAILR--------- 283
+ PE+L + Y D+WS G +L ++ P F G I +
Sbjct: 196 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 255
Query: 284 --GHID----------------------FSSDPWPNISSSAKDIVKKMLHADPKERLSAA 319
+ S+ +S A D + K+L D + RL+A
Sbjct: 256 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 315
Query: 320 EVLNHPWM 327
E + HP+
Sbjct: 316 EAMEHPYF 323
|
| >3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia} Length = 196 | Back alignment and structure |
|---|
Score = 136 bits (345), Expect = 7e-38
Identities = 35/150 (23%), Positives = 74/150 (49%), Gaps = 11/150 (7%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
++ ++ KE F+ +D D G I+ +++A LG +E E+ ++ + G I
Sbjct: 51 FTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVA----EAPGPI 106
Query: 427 DYIEFIT-ATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---I 482
++ F+T + + E+ + AF FD+ + G E L+ +L G+ + +
Sbjct: 107 NFTMFLTIFGDRIAGTDEEDVIVNAFNLFDEGD-GKCKEETLKRSLT--TWGEKFSQDEV 163
Query: 483 KEIIAEVDIDNDGRINYEEFAAMMRKGNPD 512
+ ++E ID +G I+ ++FA ++ KG +
Sbjct: 164 DQALSEAPIDGNGLIDIKKFAQILTKGAKE 193
|
| >3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia} Length = 196 | Back alignment and structure |
|---|
Score = 72.7 bits (179), Expect = 5e-15
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 7/83 (8%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
IA E+ I F D + G E LK L G + S+ EV Q + A +DG
Sbjct: 119 IAGTDEEDVI---VNAFNLFD-EGDGKCKEETLKRSLTTWGEKFSQDEVDQALSEAPIDG 174
Query: 423 NGTIDYIEFITATMHMNRVEREE 445
NG ID +F + + +EE
Sbjct: 175 NGLIDIKKFAQ---ILTKGAKEE 194
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360 | Back alignment and structure |
|---|
Score = 141 bits (358), Expect = 7e-38
Identities = 81/325 (24%), Positives = 120/325 (36%), Gaps = 55/325 (16%)
Query: 48 SATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN 107
S S + + + + R G+G FG L K T A K +
Sbjct: 4 SMMSLNAAAAADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV------- 56
Query: 108 RDDVEDVRREVQIMHHLT--GHRNIVELK-----GAYEDRHSV--NLIMDLCAGGELFDR 158
D RE+QIM L H NIV+L+ DR + N++M+ L
Sbjct: 57 IQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYV-PDTLHRC 115
Query: 159 IIAKGHYSERAAANLCR----QMVTVVHYCH--SMGVMHRDLKPENFLFSSSAEDSPLKA 212
L + Q++ + H S+ V HRD+KP N L + + D LK
Sbjct: 116 CRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEA--DGTLKL 173
Query: 213 TDFGLSVFFKPGDVFKDLVGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFW 270
DFG + P + + S YY APE++ ++Y DIWS G I ++ G P F
Sbjct: 174 CDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFR 233
Query: 271 GETEQSIFDAILR---------------GHIDFS-----SDPW--------PNISSSAKD 302
G+ I+R H D PW + A D
Sbjct: 234 GDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYD 293
Query: 303 IVKKMLHADPKERLSAAEVLNHPWM 327
++ +L P+ER+ E L HP+
Sbjct: 294 LLSALLQYLPEERMKPYEALCHPYF 318
|
| >1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A Length = 173 | Back alignment and structure |
|---|
Score = 136 bits (343), Expect = 8e-38
Identities = 29/145 (20%), Positives = 55/145 (37%), Gaps = 15/145 (10%)
Query: 370 EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTR--------LSESEVRQLMEAADVD 421
EE+ + +F + D+ ++ EL L K+ TR R ++ D D
Sbjct: 1 EEVRQFRRLFAQLAGDD-MEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSD 59
Query: 422 GNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT 481
G + + EF ++ ++ FD D SG I EL A + +
Sbjct: 60 TTGKLGFEEFKYLWNNIK------KWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEH 113
Query: 482 IKEIIAEVDIDNDGRINYEEFAAMM 506
+ +I D G ++++ F + +
Sbjct: 114 LYSMIIRRYSDEGGNMDFDNFISCL 138
|
| >1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A Length = 173 | Back alignment and structure |
|---|
Score = 99.0 bits (247), Expect = 2e-24
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 370 EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYI 429
I + ++K D D SGTI EL G L+E + ++ D G +D+
Sbjct: 74 NNIKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNE-HLYSMIIRRYSDEGGNMDFD 132
Query: 430 EFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELE 468
FI+ + + + +++AF+ DKD +G I + E
Sbjct: 133 NFISCLVRL------DAMFRAFKSLDKDGTGQIQVNIQE 165
|
| >1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A Length = 173 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 3e-10
Identities = 15/76 (19%), Positives = 28/76 (36%), Gaps = 10/76 (13%)
Query: 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAK---------TIKEIIAEVDID 492
E + F D+ ++ EL + L K T + ++A +D D
Sbjct: 1 EEVRQFRRLFAQLAGDD-MEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSD 59
Query: 493 NDGRINYEEFAAMMRK 508
G++ +EEF +
Sbjct: 60 TTGKLGFEEFKYLWNN 75
|
| >2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} Length = 191 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 9e-38
Identities = 26/184 (14%), Positives = 58/184 (31%), Gaps = 30/184 (16%)
Query: 362 VIAENLSEEEIMGLKEMFKSM-DTDNSGTITFEELKAGLPKLGT---------------R 405
+ A LS+ + + +F + D ++ G I +++ + + K+
Sbjct: 1 MAAHQLSDFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARA 60
Query: 406 LSESEVRQLMEAADVDGNGTIDYIEFITATMH-MNRVEREEHLYKA--------FEYFDK 456
+ L + AD + + + E++ + VE+ E L + F+ D
Sbjct: 61 TLKLIWDGLRKYADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDT 120
Query: 457 DNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK----GNPD 512
I E Y + + + + E FA + + +
Sbjct: 121 SGDNIIDKHEYSTVYMSYGIPKS-DCDAAFDTLSDGGKTMVTREIFARLWTEYFVSNDRG 179
Query: 513 MVGN 516
GN
Sbjct: 180 AKGN 183
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 139 bits (351), Expect = 2e-37
Identities = 67/266 (25%), Positives = 117/266 (43%), Gaps = 32/266 (12%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
+GRG FGV + + A K ++ + + + E++ + + H NI
Sbjct: 12 VEEVVGRGAFGVVCKAKWRA--KDVAIK-----QIESESERKAFIVELRQLSRVN-HPNI 63
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRIIAKG---HYSERAAANLCRQMVTVVHYCHSM 187
V+L GA + L+M+ GG L++ + +Y+ A + C Q V Y HSM
Sbjct: 64 VKLYGACLNPVC--LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSM 121
Query: 188 ---GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR 244
++HRDLKP N L + + LK DFG + + + GSA ++APEV
Sbjct: 122 QPKALIHRDLKPPNLLLVAG--GTVLKICDFGTACDIQ--THMTNNKGSAAWMAPEVFEG 177
Query: 245 N-YGAEADIWSAGVILYILLSGVPPFWG--ETEQSIFDAILRGH---IDFSSDPWPNISS 298
+ Y + D++S G+IL+ +++ PF I A+ G + N+
Sbjct: 178 SNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLI------KNLPK 231
Query: 299 SAKDIVKKMLHADPKERLSAAEVLNH 324
+ ++ + DP +R S E++
Sbjct: 232 PIESLMTRCWSKDPSQRPSMEEIVKI 257
|
| >2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A Length = 146 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 3e-37
Identities = 27/144 (18%), Positives = 61/144 (42%), Gaps = 12/144 (8%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
EE++ + + G I+ + KLG S + +++ E +
Sbjct: 9 QLEEKVDESDVRIYFNEKSSGGKISIDNASYNARKLGLAPSSIDEKKIKE----LYGDNL 64
Query: 427 DYIEFITA-TMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---I 482
Y +++ ++ ++ + E L K F +FD + +GY+T ++++ L GDA T
Sbjct: 65 TYEQYLEYLSICVHDKDNVEELIKMFAHFDNNCTGYLTKSQMKNILT--TWGDALTDQEA 122
Query: 483 KEIIAEVDIDNDGRINYEEFAAMM 506
+ + ++ I+Y+ F +
Sbjct: 123 IDALNAF--SSEDNIDYKLFCEDI 144
|
| >2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A Length = 146 | Back alignment and structure |
|---|
Score = 69.2 bits (170), Expect = 3e-14
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
+ EE++ +MF D + +G +T ++K L G L++ E + A + N ID
Sbjct: 82 NVEELI---KMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAIDALNAFSSEDN--ID 136
Query: 428 YIEFITATMH 437
Y F +
Sbjct: 137 YKLFCEDILQ 146
|
| >2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A Length = 146 | Back alignment and structure |
|---|
Score = 54.1 bits (131), Expect = 5e-09
Identities = 8/59 (13%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Query: 450 AFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508
+ +K + G I+++ + +K +G A + + ++ + YE++ +
Sbjct: 20 RIYFNEKSSGGKISIDNASYNARK--LGLAPSSIDE-KKIKELYGDNLTYEQYLEYLSI 75
|
| >1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C Length = 151 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 8e-37
Identities = 34/147 (23%), Positives = 64/147 (43%), Gaps = 9/147 (6%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVD--GNG 424
+++++ KE F+ D G I + + + LG + +EV +++ D +
Sbjct: 4 FNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSR 63
Query: 425 TIDYIEFI---TATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT 481
+D+ F+ A E + F FDK+ +G + EL H L +G+ T
Sbjct: 64 RVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLT--TLGEKMT 121
Query: 482 IKEI--IAEVDIDNDGRINYEEFAAMM 506
+E+ + D++G INYE F +
Sbjct: 122 EEEVETVLAGHEDSNGCINYEAFLKHI 148
|
| >1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C Length = 151 | Back alignment and structure |
|---|
Score = 69.2 bits (170), Expect = 3e-14
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
+ E+ E F+ D + +G + EL+ L LG +++E EV ++ D NG I+
Sbjct: 85 TYEDY---LEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAG-HEDSNGCIN 140
Query: 428 YIEFITATMHM 438
Y F+ + +
Sbjct: 141 YEAFLKHILSV 151
|
| >1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C Length = 151 | Back alignment and structure |
|---|
Score = 59.1 bits (144), Expect = 1e-10
Identities = 15/71 (21%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKK--YNMGDAKTIKEIIAEVDID--NDGRI 497
++ E +AFE FD+ G I + ++ N +A + +++ D R+
Sbjct: 7 DQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNA-EVLKVLGNPKSDELKSRRV 65
Query: 498 NYEEFAAMMRK 508
++E F M++
Sbjct: 66 DFETFLPMLQA 76
|
| >1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... Length = 156 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 8e-37
Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 13/156 (8%)
Query: 367 LSEEEIMGLKEMFKSMD--TDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNG 424
LS++EI LK++F+ D G + +L LG +V + G
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGT-HKMGEK 61
Query: 425 TIDYIEFITATMHMNRVER--EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT- 481
++ + EF+ A + E+ +AF+ FD++ G+I+ EL H L +G+ +
Sbjct: 62 SLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLT--ALGERLSD 119
Query: 482 --IKEIIAEVDI--DNDGRINYEEFAAMMRKGN-PD 512
+ EII D+ D +G + YE+F + G PD
Sbjct: 120 EDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAGPYPD 155
|
| >1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... Length = 156 | Back alignment and structure |
|---|
Score = 71.0 bits (175), Expect = 7e-15
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 361 KVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADV 420
+ E + + M E FK+ D + G I+ EL+ L LG RLS+ +V ++++ D+
Sbjct: 75 LMDCEQGTFADYM---EAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDL 131
Query: 421 --DGNGTIDYIEFI 432
D G + Y +F+
Sbjct: 132 QEDLEGNVKYEDFV 145
|
| >1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A Length = 148 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 2e-36
Identities = 31/149 (20%), Positives = 69/149 (46%), Gaps = 14/149 (9%)
Query: 371 EIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEA-ADVDGNGTIDYI 429
K++F D G I + L L +G + V+ ++ A + + ++
Sbjct: 2 ATRANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLD 61
Query: 430 EFITATMHMNRVER-------EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT- 481
+ + +N E E KAF+ FDK+++G +++ +L + L +G+ T
Sbjct: 62 QITGL-IEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLT--GLGEKLTD 118
Query: 482 --IKEIIAEVDIDNDGRINYEEFAAMMRK 508
+ E++ V++D++G I+Y++F + +
Sbjct: 119 AEVDELLKGVEVDSNGEIDYKKFIEDVLR 147
|
| >1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A Length = 148 | Back alignment and structure |
|---|
Score = 74.2 bits (183), Expect = 5e-16
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
E+ + F+ D +++G ++ +L+ L LG +L+++EV +L++ +VD N
Sbjct: 77 TTKAKTED---FVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSN 133
Query: 424 GTIDYIEFI 432
G IDY +FI
Sbjct: 134 GEIDYKKFI 142
|
| >2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* Length = 149 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 7e-36
Identities = 33/148 (22%), Positives = 60/148 (40%), Gaps = 11/148 (7%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVD--GNG 424
S+ KE F D IT ++ LG + +E+ +++ +
Sbjct: 2 FSKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAA 61
Query: 425 TIDYIEFI---TATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT 481
I + EF+ A + E + FDK+ +G + EL H L +G+ T
Sbjct: 62 AITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLA--TLGEKMT 119
Query: 482 ---IKEIIAEVDIDNDGRINYEEFAAMM 506
++E++ + D++G INYE F +
Sbjct: 120 EEEVEELMKGQE-DSNGCINYEAFVKHI 146
|
| >2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* Length = 149 | Back alignment and structure |
|---|
Score = 69.9 bits (172), Expect = 2e-14
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
+ E+ + E + D + +GT+ EL+ L LG +++E EV +LM+ + D NG I+
Sbjct: 83 TFEDFV---EGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKGQE-DSNGCIN 138
Query: 428 YIEFITATMHM 438
Y F+ M +
Sbjct: 139 YEAFVKHIMSV 149
|
| >2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* Length = 149 | Back alignment and structure |
|---|
Score = 59.5 bits (145), Expect = 6e-11
Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 6/71 (8%)
Query: 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKK--YNMGDAKTIKEIIAEVDID--NDGRI 497
++ +AF FD+ IT ++ + N +A I +I+ + N I
Sbjct: 6 AADD-FKEAFLLFDRTGDAKITASQVGDIARALGQNPTNA-EINKILGNPSKEEMNAAAI 63
Query: 498 NYEEFAAMMRK 508
+EEF M++
Sbjct: 64 TFEEFLPMLQA 74
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 2e-35
Identities = 86/326 (26%), Positives = 139/326 (42%), Gaps = 64/326 (19%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
D+ + Y+ + LG G G+ + D ++ A K I V+ RE++I+
Sbjct: 8 DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQ---SVKHALREIKIIRR 64
Query: 124 LTGHRNIVELK--------------GAYEDRHSVNLIM-----DLCAGGELFDRIIAKGH 164
L H NIV++ G+ + +SV ++ DL ++ +G
Sbjct: 65 L-DHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLA-------NVLEQGP 116
Query: 165 YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224
E A Q++ + Y HS V+HRDLKP N ++ ED LK DFGL+ P
Sbjct: 117 LLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINT--EDLVLKIGDFGLARIMDPH 174
Query: 225 DVFKDL----VGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETE---- 274
K + + +Y +P +L NY D+W+AG I +L+G F G E
Sbjct: 175 YSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQM 234
Query: 275 QSIFDAI------------------LRGHIDFSSDPW----PNISSSAKDIVKKMLHADP 312
Q I ++I +R + P P IS A D ++++L P
Sbjct: 235 QLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSP 294
Query: 313 KERLSAAEVLNHPWMRVDGDASDKPL 338
+RL+A E L+HP+M + D+P+
Sbjct: 295 MDRLTAEEALSHPYMSIYSFPMDEPI 320
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 7e-35
Identities = 72/307 (23%), Positives = 123/307 (40%), Gaps = 40/307 (13%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
+VR Y + +G G +G T + A K + R + + RE++++ H
Sbjct: 22 EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLY-RPFQSELFAKRAYRELRLLKH 80
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVT 179
+ H N++ L + +++ D +++ E L QM+
Sbjct: 81 MR-HENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLK 139
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAP 239
+ Y H+ G++HRDLKP N + D LK DFGL+ V + +Y AP
Sbjct: 140 GLRYIHAAGIIHRDLKPGNLAVNE---DCELKILDFGLARQADSE--MTGYVVTRWYRAP 194
Query: 240 EVL--RRNYGAEADIWSAGVILYILLSGVPPFWG-------------------ETEQSIF 278
EV+ Y DIWS G I+ +++G F G E Q +
Sbjct: 195 EVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQ 254
Query: 279 DAILRGHID----FSSDPW----PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330
+ ++ + N S A ++++KML D ++R++A E L HP+
Sbjct: 255 SDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL 314
Query: 331 GDASDKP 337
D D+P
Sbjct: 315 HDTEDEP 321
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 9e-35
Identities = 77/310 (24%), Positives = 128/310 (41%), Gaps = 78/310 (25%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR----REVQIMHHLTGHRNI 130
+G+G FG + H+ T Q+ A K K++ ++ E RE++I+ L H N+
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALK-----KVLMENEKEGFPITALREIKILQLLK-HENV 78
Query: 131 VELKG--------AYEDRHSVNLIMDLC----AGGELFDRIIAKGHYSERAAANLCRQMV 178
V L + S+ L+ D C AG L + ++ + + ++
Sbjct: 79 VNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG--LLSNV--LVKFTLSEIKRVMQMLL 134
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY--- 235
++Y H ++HRD+K N L + LK DFGL+ F + K+ + Y
Sbjct: 135 NGLYYIHRNKILHRDMKAANVLITRDGV---LKLADFGLARAF---SLAKNSQPNRYTNR 188
Query: 236 -----YVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQS----IFDAILRG 284
Y PE+L R+YG D+W AG I+ + + P G TEQ I L G
Sbjct: 189 VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQ--LCG 246
Query: 285 HIDFSSDPWPNISS----------------------------SAKDIVKKMLHADPKERL 316
I + + WPN+ + A D++ K+L DP +R+
Sbjct: 247 SI--TPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRI 304
Query: 317 SAAEVLNHPW 326
+ + LNH +
Sbjct: 305 DSDDALNHDF 314
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 2e-34
Identities = 71/293 (24%), Positives = 122/293 (41%), Gaps = 53/293 (18%)
Query: 75 LGRGQFGVTYLVTH-KDTKQQFACKSISSRKLINRDDVEDVR--REVQIMHHL--TGHRN 129
+G G +G + K+ + A K + ++ ++ + REV ++ HL H N
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRV---RVQTGEEGMPLSTIREVAVLRHLETFEHPN 75
Query: 130 IVELK-----GAYEDRHSVNLIM-----DLCAGGELFDRIIAKGHYSERAAANLCRQMVT 179
+V L + + L+ DL D++ + ++ Q++
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHVDQDL---TTYLDKV-PEPGVPTETIKDMMFQLLR 131
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAP 239
+ + HS V+HRDLKP+N L +SS + +K DFGL+ + +V + +Y AP
Sbjct: 132 GLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVVVTLWYRAP 188
Query: 240 EVL-RRNYGAEADIWSAGVILYILLSGVPPFWGETEQS----IFDAILRGHID------F 288
EVL + +Y D+WS G I + P F G ++ I D I G
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVI--GLPGEEDWPRD 246
Query: 289 SSDPW---------------PNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
+ P +I KD++ K L +P +R+SA L+HP+
Sbjct: 247 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 299
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 2e-34
Identities = 73/348 (20%), Positives = 125/348 (35%), Gaps = 86/348 (24%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSI---SSRKLINRDDVEDVRREVQ 119
E Y G+ LG G FG+ V ++ ++FA K + K RE+
Sbjct: 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKN----------RELD 52
Query: 120 IMHHLTGHRNIVELK--------------------------------------GAYEDRH 141
IM L H NI++L
Sbjct: 53 IMKVLD-HVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNK 111
Query: 142 SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR----QMVTVVHYCHSMGVMHRDLKPE 197
+N+IM+ L + + NL Q+ V + HS+G+ HRD+KP+
Sbjct: 112 YLNVIMEYV-PDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQ 170
Query: 198 NFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL--RRNYGAEADIWSA 255
N L +++D+ LK DFG + P + + S +Y APE++ Y D+WS
Sbjct: 171 NLLV--NSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSI 228
Query: 256 GVILYILLSGVPPFWGETE---------------QSIFDAILRGHIDFSSDPWPNIS--- 297
G + L+ G P F GET + + + +
Sbjct: 229 GCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRK 288
Query: 298 -------SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338
S A D+++++L +P R++ E + HP+ ++ + +
Sbjct: 289 ILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNSYESEV 336
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367 | Back alignment and structure |
|---|
Score = 132 bits (333), Expect = 2e-34
Identities = 77/310 (24%), Positives = 128/310 (41%), Gaps = 46/310 (14%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
+V Y +G G +G T + A K +S R + + RE++++ H
Sbjct: 26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKH 84
Query: 124 LTGHRNIVELK------GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQM 177
+ H N++ L + E+ + V L+ L G +L + I+ ++ L Q+
Sbjct: 85 MK-HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADL-NNIVKCQKLTDDHVQFLIYQI 141
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFK-DLVGSAYY 236
+ + Y HS ++HRDLKP N + D LK DFGL+ + V + +Y
Sbjct: 142 LRGLKYIHSADIIHRDLKPSNLAVNE---DCELKILDFGLA---RHTADEMTGYVATRWY 195
Query: 237 VAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWG-------------------ETEQ 275
APE++ +Y DIWS G I+ LL+G F G E +
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLK 255
Query: 276 SIFDAILRGHID----FSSDPW----PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
I R +I + + A D+++KML D +R++AA+ L H +
Sbjct: 256 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
Query: 328 RVDGDASDKP 337
D D+P
Sbjct: 316 AQYHDPDDEP 325
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 4e-34
Identities = 80/317 (25%), Positives = 128/317 (40%), Gaps = 49/317 (15%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
V Y + +G G G+ ++ A K +S R N+ + RE+ +M
Sbjct: 22 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKC 80
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVT 179
+ H+NI+ L + + S+ D+ EL D ++I ER + L QM+
Sbjct: 81 V-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS-YLLYQMLC 138
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAP 239
+ + HS G++HRDLKP N + S LK DFGL+ + V + YY AP
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLARTAGTSFMMTPYVVTRYYRAP 195
Query: 240 EV-LRRNYGAEADIWSAGVILYILLSGVPPFWGE----------------TEQSI----- 277
EV L Y DIWS G I+ ++ G F G + +
Sbjct: 196 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP 255
Query: 278 ----------------FDAILRGHIDFSSDPWPNISSS-AKDIVKKMLHADPKERLSAAE 320
F+ + + + + +S A+D++ KML D +R+S E
Sbjct: 256 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 315
Query: 321 VLNHPWMRVDGDASDKP 337
L HP++ V D S+
Sbjct: 316 ALQHPYINVWYDPSEAE 332
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 130 bits (330), Expect = 5e-34
Identities = 80/307 (26%), Positives = 127/307 (41%), Gaps = 41/307 (13%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
++ TY+ +G G +G K + ++ A K +S R + + RE+ ++ H
Sbjct: 21 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLS-RPFQSEIFAKRAYRELLLLKH 79
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVT 179
+ H N++ L + S+ D +I+ +SE L QM+
Sbjct: 80 MQ-HENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIM-GLKFSEEKIQYLVYQMLK 137
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAP 239
+ Y HS GV+HRDLKP N + D LK DFGL+ V + +Y AP
Sbjct: 138 GLKYIHSAGVVHRDLKPGNLAVNE---DCELKILDFGLARHADAE--MTGYVVTRWYRAP 192
Query: 240 EVL--RRNYGAEADIWSAGVILYILLSGVPPFWG-------------------ETEQSIF 278
EV+ +Y DIWS G I+ +L+G F G E Q +
Sbjct: 193 EVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLN 252
Query: 279 DAILRGHID----FSSDPW----PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330
D + +I + P S A D+++KML D +RL+AA+ L HP+
Sbjct: 253 DKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF 312
Query: 331 GDASDKP 337
D ++
Sbjct: 313 RDPEEET 319
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 6e-34
Identities = 61/265 (23%), Positives = 111/265 (41%), Gaps = 24/265 (9%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
++G G FG + A K + + + + V + REV IM L H NI
Sbjct: 41 IKEKIGAGSFGTVHRAEWHG--SDVAVKILMEQDF-HAERVNEFLREVAIMKRLR-HPNI 96
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRII---AKGHYSERAAANLCRQMVTVVHYCHSM 187
V GA +++++ + + G L+ + A+ ER ++ + ++Y H+
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 188 G--VMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLRR 244
++HR+LK N L + +K DFGLS + K G+ ++APEVLR
Sbjct: 157 NPPIVHRNLKSPNLLVD---KKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRD 213
Query: 245 N-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA--- 300
++D++S GVIL+ L + P+ + A+ I +
Sbjct: 214 EPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKR------LEIPRNLNPQ 267
Query: 301 -KDIVKKMLHADPKERLSAAEVLNH 324
I++ +P +R S A +++
Sbjct: 268 VAAIIEGCWTNEPWKRPSFATIMDL 292
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 6e-34
Identities = 76/317 (23%), Positives = 126/317 (39%), Gaps = 49/317 (15%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
V Y + +G G G+ + A K +S R N+ + RE+ +M
Sbjct: 59 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKC 117
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVT 179
+ H+NI+ L + + ++ D+ EL D ++I + + L QM+
Sbjct: 118 V-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-QMELDHERMSYLLYQMLC 175
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAP 239
+ + HS G++HRDLKP N + S D LK DFGL+ + V + YY AP
Sbjct: 176 GIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 232
Query: 240 EV-LRRNYGAEADIWSAGVILYILLSGVPPFWGE----------------TEQSI----- 277
EV L Y DIWS G I+ ++ F G + +
Sbjct: 233 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 292
Query: 278 ----------------FDAILRGHIDFSSDPWPNISSS-AKDIVKKMLHADPKERLSAAE 320
F + + + + +S A+D++ KML DP +R+S +
Sbjct: 293 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDD 352
Query: 321 VLNHPWMRVDGDASDKP 337
L HP++ V D ++
Sbjct: 353 ALQHPYINVWYDPAEVE 369
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 8e-34
Identities = 65/266 (24%), Positives = 111/266 (41%), Gaps = 21/266 (7%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDD-VEDVRREVQIMHHLTGHRN 129
+G G FG Y + A K+ + +E+VR+E ++ L H N
Sbjct: 11 LEEIIGIGGFGKVYRAFWIG--DEVAVKAARHDPDEDISQTIENVRQEAKLFAMLK-HPN 67
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG- 188
I+ L+G ++ L+M+ GG L +++ N Q+ ++Y H
Sbjct: 68 IIALRGVCLKEPNLCLVMEFARGGPLNR-VLSGKRIPPDILVNWAVQIARGMNYLHDEAI 126
Query: 189 --VMHRDLKPENFLFSSSAEDSP-----LKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV 241
++HRDLK N L E+ LK TDFGL+ G+ ++APEV
Sbjct: 127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA-REWHRTTKMSAAGAYAWMAPEV 185
Query: 242 LRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI--DFSSDPWPNISS 298
+R + + +D+WS GV+L+ LL+G PF G ++ + + S
Sbjct: 186 IRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPF-- 243
Query: 299 SAKDIVKKMLHADPKERLSAAEVLNH 324
+++ + DP R S +L+
Sbjct: 244 --AKLMEDCWNPDPHSRPSFTNILDQ 267
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 9e-34
Identities = 33/140 (23%), Positives = 56/140 (40%), Gaps = 15/140 (10%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLG-----TRLSESEVRQLMEAADVDGNGTIDYI 429
L F S+ G I +EL+ L + G + R ++ D D +GT+ +
Sbjct: 4 LYGYFASV-AGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFN 62
Query: 430 EFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAE 488
EF +N + F FD D SG + +EL+ AL + +T+ I
Sbjct: 63 EFKELWAVLN------GWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKR 116
Query: 489 VDIDNDGRINYEEFAAMMRK 508
G+I ++++ A K
Sbjct: 117 Y--STSGKITFDDYIACCVK 134
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167 | Back alignment and structure |
|---|
Score = 80.5 bits (199), Expect = 6e-18
Identities = 22/97 (22%), Positives = 41/97 (42%), Gaps = 8/97 (8%)
Query: 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEF 431
+ G ++ F S D+D SGT+ +EL+ L +G RL+ V + +G I + ++
Sbjct: 71 LNGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIA--KRYSTSGKITFDDY 128
Query: 432 ITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELE 468
I + + L +F D G + +
Sbjct: 129 IACCVKLRA------LTDSFRRRDSAQQGMVNFSYDD 159
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 1e-33
Identities = 82/320 (25%), Positives = 125/320 (39%), Gaps = 62/320 (19%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR---REVQI 120
DV Y +G G +G+ K + A K K+ + + RE++I
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIK-----KISPFEHQTYCQRTLREIKI 78
Query: 121 MHHLTGHRNIVELK-----GAYEDRHSVNLIM-----DLCAGGELFDRIIAKGHYSERAA 170
+ H NI+ + E V ++ DL +++ H S
Sbjct: 79 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-------KLLKTQHLSNDHI 130
Query: 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL 230
Q++ + Y HS V+HRDLKP N L ++ LK DFGL+ P
Sbjct: 131 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGF 187
Query: 231 ----VGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWG------------- 271
V + +Y APE++ + Y DIWS G IL +LS P F G
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 247
Query: 272 ------ETEQSIFDAILRGHID----FSSDPW----PNISSSAKDIVKKMLHADPKERLS 317
E I + R ++ + PW PN S A D++ KML +P +R+
Sbjct: 248 LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIE 307
Query: 318 AAEVLNHPWMRVDGDASDKP 337
+ L HP++ D SD+P
Sbjct: 308 VEQALAHPYLEQYYDPSDEP 327
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} Length = 135 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 1e-33
Identities = 23/116 (19%), Positives = 40/116 (34%), Gaps = 5/116 (4%)
Query: 408 ESEVRQLMEAADVDGNGTIDYIEFITA-TMHMNRVEREEHLYKAFEYFDKDNSGYITMEE 466
E + ++ Y + + M+ E L K F IT E
Sbjct: 2 EPTEKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAES 61
Query: 467 LEHALKKY---NMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGNPDMVGNRRR 519
L M + ++ E D+D DG +N EF +M + +P+M+ +
Sbjct: 62 LRRNSGILGIEGMSKE-DAQGMVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAET 116
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} Length = 135 | Back alignment and structure |
|---|
Score = 69.7 bits (171), Expect = 2e-14
Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Query: 360 LKVIAENLSEEEIMG-LKEMFKSMDTDNSGTITFEELKAGLPKLGT-RLSESEVRQLMEA 417
L V+AE + EE + L + F + IT E L+ LG +S+ + + ++
Sbjct: 26 LPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVRE 85
Query: 418 ADVDGNGTIDYIEFITATMHMNR---VEREEHLYKAFEYFDKDNS 459
D+DG+G ++ EF + ++ + E L KA +++
Sbjct: 86 GDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALTQELCNHN 130
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} Length = 135 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 6e-05
Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 355 LKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQL 414
L++ + + E +S+E+ + M + D D G + E + +L + E L
Sbjct: 62 LRRNSGILGIEGMSKED---AQGMVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWL 118
Query: 415 MEAADVD 421
+A +
Sbjct: 119 EKALTQE 125
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 127 bits (322), Expect = 2e-33
Identities = 54/217 (24%), Positives = 94/217 (43%), Gaps = 24/217 (11%)
Query: 70 IFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN 129
I G LG+G FG VTH++T + K + + + +EV++M L H N
Sbjct: 13 IHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR---FDEETQRTFLKEVKVMRCLE-HPN 68
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRI-IAKGHYSERAAANLCRQMVTVVHYCHSMG 188
+++ G +N I + GG L I Y + + + + + Y HSM
Sbjct: 69 VLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN 128
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLS---------------VFFKPGDVFKDLVGS 233
++HRDL N L E+ + DFGL+ + +VG+
Sbjct: 129 IIHRDLNSHNCLVR---ENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGN 185
Query: 234 AYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPF 269
Y++APE++ R+Y + D++S G++L ++ V
Sbjct: 186 PYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNAD 222
|
| >2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A Length = 108 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 3e-33
Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 402 LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGY 461
L LS S++ + D + +F + + L + F D D SG+
Sbjct: 2 LTDILSPSDIAAALR--DCQAPDSFSPKKFFQISGMSK--KSSSQLKEIFRILDNDQSGF 57
Query: 462 ITMEELEHALKKYNMGDAKT----IKEIIAEVDIDNDGRINYEEFAAMMR 507
I +EL++ L+++ G K +A D D DG+I EEF M++
Sbjct: 58 IEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEEFQEMVQ 107
|
| >2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A Length = 108 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 9e-31
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 334 SDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFE 393
+D + ++ +A + I+ +S++ LKE+F+ +D D SG I +
Sbjct: 3 TDILSPSDIAAALRDCQAPDSFSPKKFFQISG-MSKKSSSQLKEIFRILDNDQSGFIEED 61
Query: 394 ELKAGLPKLGT---RLSESEVRQLMEAADVDGNGTIDYIEFIT 433
ELK L + + L+ SE + + AAD DG+G I EF
Sbjct: 62 ELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEEFQE 104
|
| >1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 Length = 140 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 6e-33
Identities = 31/143 (21%), Positives = 60/143 (41%), Gaps = 13/143 (9%)
Query: 370 EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYI 429
+ K+ F D +G I + L G + +E+ ++ + +D
Sbjct: 2 TDDSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEI----ESTLPAEVDME 57
Query: 430 EFI---TATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---IK 483
+F+ + E K F+ FDKD +G I + EL + L ++G+ + +
Sbjct: 58 QFLQVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLT--SLGEKLSNEEMD 115
Query: 484 EIIAEVDIDNDGRINYEEFAAMM 506
E++ V + DG +NY +F M+
Sbjct: 116 ELLKGVPVK-DGMVNYHDFVQMI 137
|
| >1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 Length = 140 | Back alignment and structure |
|---|
Score = 67.9 bits (167), Expect = 6e-14
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
EE + + F+ D D +G I EL+ L LG +LS E+ +L++ V +G ++
Sbjct: 74 DPEEFV---KGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK-DGMVN 129
Query: 428 YIEFI 432
Y +F+
Sbjct: 130 YHDFV 134
|
| >1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 Length = 140 | Back alignment and structure |
|---|
Score = 61.0 bits (149), Expect = 1e-11
Identities = 14/65 (21%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Query: 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFA 503
+ +AF FD+ +G I + L+ G T+ EI E++ ++ E+F
Sbjct: 4 DSPYKQAFSLFDRHGTGRIPKTSIGDLLR--ACGQNPTLAEIT-EIESTLPAEVDMEQFL 60
Query: 504 AMMRK 508
++ +
Sbjct: 61 QVLNR 65
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 8e-33
Identities = 71/328 (21%), Positives = 114/328 (34%), Gaps = 71/328 (21%)
Query: 63 EDVRNTY-IFGRELGRGQFGVTYLVTHKD--TKQQFACKSISSRKLINRDDVED-VRREV 118
E V + + G ++GRG +G Y KD + +A K I + RE+
Sbjct: 16 ERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQI------EGTGISMSACREI 69
Query: 119 QIMHHLTGHRNIVELKGAYEDR--HSVNLIMD--------LCAGGELFDRIIAKGHYSER 168
++ L H N++ L+ + V L+ D +
Sbjct: 70 ALLRELK-HPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRG 128
Query: 169 AAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDS-PLKATDFGLS-VFFKPGDV 226
+L Q++ +HY H+ V+HRDLKP N L + +K D G + +F P
Sbjct: 129 MVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP 188
Query: 227 FKDLVGSA---YYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAI 281
DL +Y APE+L R+Y DIW+ G I LL+ P F E
Sbjct: 189 LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNP 248
Query: 282 LRG----HI-------------DFSSDPW--------------------------PNISS 298
I D P S
Sbjct: 249 YHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDS 308
Query: 299 SAKDIVKKMLHADPKERLSAAEVLNHPW 326
A +++K+L DP +R+++ + + P+
Sbjct: 309 KAFHLLQKLLTMDPIKRITSEQAMQDPY 336
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 125 bits (317), Expect = 8e-33
Identities = 61/264 (23%), Positives = 111/264 (42%), Gaps = 19/264 (7%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
G+ +G G FG Y A K ++ ++ + EV ++ H NI
Sbjct: 28 VGQRIGSGSFGTVY---KGKWHGDVAVKMLNVTAP-TPQQLQAFKNEVGVLRKTR-HVNI 82
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRI-IAKGHYSERAAANLCRQMVTVVHYCHSMGV 189
+ G + ++ C G L+ + ++ + + ++ RQ + Y H+ +
Sbjct: 83 LLFMGYSTAPQ-LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSI 141
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLS---VFFKPGDVFKDLVGSAYYVAPEVLRRN- 245
+HRDLK N ED+ +K DFGL+ + F+ L GS ++APEV+R
Sbjct: 142 IHRDLKSNNIFLH---EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 246 ---YGAEADIWSAGVILYILLSGVPPFWGET-EQSIFDAILRGHIDFSSDPWP-NISSSA 300
Y ++D+++ G++LY L++G P+ I + + RG + N
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRM 258
Query: 301 KDIVKKMLHADPKERLSAAEVLNH 324
K ++ + L ER S +L
Sbjct: 259 KRLMAECLKKKRDERPSFPRILAE 282
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 9e-33
Identities = 65/319 (20%), Positives = 116/319 (36%), Gaps = 52/319 (16%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR-----DDVEDVR--- 115
+++ Y R + G +G A K + + R D +
Sbjct: 19 AMQSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVL 77
Query: 116 REVQIMHHLTGHRNIVELK-----GAYEDRHSVNLIMDLCAGGELFDRIIAKGHY--SER 168
RE+++++H H NI+ L+ H + L+ +L +L ++I S +
Sbjct: 78 REIRLLNHFH-HPNILGLRDIFVHFEEPAMHKLYLVTEL-MRTDL-AQVIHDQRIVISPQ 134
Query: 169 AAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFK 228
++ +H H GV+HRDL P N L + ++ + DF L+
Sbjct: 135 HIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLAD---NNDITICDFNLAREDTADANKT 191
Query: 229 DLVGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWG--------------- 271
V +Y APE++ + + D+WSAG ++ + + F G
Sbjct: 192 HYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVG 251
Query: 272 ----ETEQSIFDAILRGHIDFS-----SDPW----PNISSSAKDIVKKMLHADPKERLSA 318
E R ++ S + W P A D++ KML +P+ R+S
Sbjct: 252 TPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRIST 311
Query: 319 AEVLNHPWMRVDGDASDKP 337
+ L HP+ D D
Sbjct: 312 EQALRHPYFESLFDPLDLT 330
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 125 bits (315), Expect = 1e-32
Identities = 48/268 (17%), Positives = 96/268 (35%), Gaps = 31/268 (11%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
F +L G + + K + R R D E + + H N+
Sbjct: 14 FLTKLNENHSGELWKGRWQG--NDIVVKVLKVRDWSTRK-SRDFNEECPRLRIFS-HPNV 69
Query: 131 VELKGAYEDRHSVNL--IMDLCAGGELFDRIIAKGHY--SERAAANLCRQMVTVVHYCHS 186
+ + GA + + + I G L++ + ++ + A M + + H+
Sbjct: 70 LPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT 129
Query: 187 MG--VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR 244
+ + L + + ED + + + F+ + + +VAPE L++
Sbjct: 130 LEPLIPRHALNSRSVMID---EDMTARISMADVKFSFQ----SPGRMYAPAWVAPEALQK 182
Query: 245 ----NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAI----LRGHIDFSSDPWPNI 296
AD+WS V+L+ L++ PF + I + LR I P P I
Sbjct: 183 KPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTI-----P-PGI 236
Query: 297 SSSAKDIVKKMLHADPKERLSAAEVLNH 324
S ++K ++ DP +R ++
Sbjct: 237 SPHVSKLMKICMNEDPAKRPKFDMIVPI 264
|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A Length = 109 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 1e-32
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 4/103 (3%)
Query: 334 SDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFE 393
+D + + F A + + L ++ +K++F +D D SG I +
Sbjct: 3 TDLLSAEDIKKAIGAFTAADSFDHKKFFQMV-GLKKKSADDVKKVFHILDKDKSGFIEED 61
Query: 394 ELKAGLPKL---GTRLSESEVRQLMEAADVDGNGTIDYIEFIT 433
EL + L LS E + LM A D DG+G I EF T
Sbjct: 62 ELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFST 104
|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A Length = 109 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 2e-30
Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 8/111 (7%)
Query: 402 LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGY 461
+ LS ++++ + A + D+ +F M + + + + K F DKD SG+
Sbjct: 2 MTDLLSAEDIKKAIGAFTAAD--SFDHKKFFQ--MVGLKKKSADDVKKVFHILDKDKSGF 57
Query: 462 ITMEELEHALKKYN-MGDAKT---IKEIIAEVDIDNDGRINYEEFAAMMRK 508
I +EL LK ++ + K ++A D D DG+I EEF+ ++ +
Sbjct: 58 IEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE 108
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 125 bits (315), Expect = 2e-32
Identities = 70/309 (22%), Positives = 123/309 (39%), Gaps = 37/309 (11%)
Query: 24 GPGHHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVT 83
HH + G S S G G Y R +GRG G
Sbjct: 3 SSHHHHH----HSSGLVPRGSHMDGTAESREGTQFGP--------YRLRRLVGRGGMGDV 50
Query: 84 YLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143
Y ++ A K +S + ++RE + L ++V + E +
Sbjct: 51 YEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQ-EPHVVPIHDFGEIDGQL 109
Query: 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSS 203
+ M L G +L + +G + A + RQ+ + + H+ G HRD+KPEN L S
Sbjct: 110 YVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVS- 168
Query: 204 SAEDSPLKATDFGL------SVFFKPGDVFKDLVGSAYYVAPEVLRRNY-GAEADIWSAG 256
D DFG+ + G+ VG+ YY+APE ++ ADI++
Sbjct: 169 --ADDFAYLVDFGIASATTDEKLTQLGNT----VGTLYYMAPERFSESHATYRADIYALT 222
Query: 257 VILYILLSGVPPFWGETEQSIFDAILRGHIDFS----SDPWPNISSSAKDIVKKMLHADP 312
+LY L+G PP+ G+ +++ HI+ + S P I + ++ + + +P
Sbjct: 223 CVLYECLTGSPPYQGDQL-----SVMGAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNP 277
Query: 313 KER-LSAAE 320
++R ++ +
Sbjct: 278 EDRYVTCGD 286
|
| >1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 Length = 224 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 2e-32
Identities = 37/197 (18%), Positives = 75/197 (38%), Gaps = 17/197 (8%)
Query: 334 SDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFE 393
+P + ++ ++ + + N ++ E+ L FK+ SG + E
Sbjct: 15 QRRPSKDKIEDELEMTMVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNEC--PSGVVNEE 72
Query: 394 ELKAGLPKLGTRLSESE-VRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452
K + S L A D G++ + +F+TA + R E L F
Sbjct: 73 TFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFN 132
Query: 453 YFDKDNSGYITMEELEHALKK-YNMGDAKT------------IKEIIAEVDIDNDGRINY 499
+D + GYI EE+ +K Y+M T + ++D + DG +
Sbjct: 133 LYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTL 192
Query: 500 EEFAAMMRKGNPDMVGN 516
+EF ++ + +++ +
Sbjct: 193 DEFLESCQE-DDNIMRS 208
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353 | Back alignment and structure |
|---|
Score = 123 bits (311), Expect = 2e-31
Identities = 81/327 (24%), Positives = 131/327 (40%), Gaps = 68/327 (20%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR---REVQI 120
++ + + LG G +GV THK T + A K K+ D RE++I
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIK-----KIEPFDKPLFALRTLREIKI 62
Query: 121 MHHLTGHRNIVELK-----GAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAA 171
+ H H NI+ + ++E+ + V +I EL R+I+ S+
Sbjct: 63 LKHFK-HENIITIFNIQRPDSFENFNEVYIIQ------ELMQTDLHRVISTQMLSDDHIQ 115
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDL 230
Q + V H V+HRDLKP N L +S + LK DFGL+ + + +
Sbjct: 116 YFIYQTLRAVKVLHGSNVIHRDLKPSNLLINS---NCDLKVCDFGLARIIDESAADNSEP 172
Query: 231 VGSA----------YYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGE------ 272
G +Y APEV+ Y D+WS G IL L P F G
Sbjct: 173 TGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQL 232
Query: 273 ----------TEQSIFDAI--------LRGHIDFSSDPW----PNISSSAKDIVKKMLHA 310
+ I ++ + + P P ++ D++++ML
Sbjct: 233 LLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVF 292
Query: 311 DPKERLSAAEVLNHPWMRVDGDASDKP 337
DP +R++A E L HP+++ D +D+P
Sbjct: 293 DPAKRITAKEALEHPYLQTYHDPNDEP 319
|
| >2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 3e-30
Identities = 21/173 (12%), Positives = 57/173 (32%), Gaps = 28/173 (16%)
Query: 367 LSEEEIMGLKEMFKSM-DTDNSGTITFEELKAGLPKLGT---------------RLSESE 410
L++ + +K F D ++ G+I + + + + E E
Sbjct: 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDE 61
Query: 411 VRQLMEAADVDGNGTIDYIEFITATMHMNRVER---------EEHLYKAFEYFDKDNSGY 461
R L AD++ + + + E++ + + + F+ D G
Sbjct: 62 WRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGI 121
Query: 462 ITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK--GNPD 512
+ +EE ++ K + + A + + + + + + + +P
Sbjct: 122 VDLEEFQNYCKNFQLQCA-DVPAVYNVITDGGKVTFDLNRYKELYYRLLTSPA 173
|
| >2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185 | Back alignment and structure |
|---|
Score = 64.6 bits (157), Expect = 3e-12
Identities = 13/70 (18%), Positives = 22/70 (31%), Gaps = 2/70 (2%)
Query: 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNG 424
+L + +FK MD G + EE + L ++V + G
Sbjct: 97 ADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ--LQCADVPAVYNVITDGGKV 154
Query: 425 TIDYIEFITA 434
T D +
Sbjct: 155 TFDLNRYKEL 164
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 118 bits (299), Expect = 3e-30
Identities = 71/277 (25%), Positives = 121/277 (43%), Gaps = 20/277 (7%)
Query: 54 VGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED 113
+G+++ Y +LG G YL + A K+I + ++
Sbjct: 5 IGKIIN-------ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKR 57
Query: 114 VRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL 173
REV L+ H+NIV + E+ L+M+ G L + I + G S A N
Sbjct: 58 FEREVHNSSQLS-HQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINF 116
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD--LV 231
Q++ + + H M ++HRD+KP+N L + LK DFG++ + + ++
Sbjct: 117 TNQILDGIKHAHDMRIVHRDIKPQNILID---SNKTLKIFDFGIAKALSETSLTQTNHVL 173
Query: 232 GSAYYVAPEVLRRNY-GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDF-- 288
G+ Y +PE + DI+S G++LY +L G PPF GET SI AI
Sbjct: 174 GTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI--AIKHIQDSVPN 231
Query: 289 -SSDPWPNISSSAKDIVKKMLHADPKER-LSAAEVLN 323
++D +I S +++ + D R + E+ +
Sbjct: 232 VTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKD 268
|
| >1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A Length = 190 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 9e-30
Identities = 46/179 (25%), Positives = 71/179 (39%), Gaps = 19/179 (10%)
Query: 354 KLKKVALKVIAE--NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE- 410
KL K L + + EI + F SG + E+ + S +
Sbjct: 7 KLSKDDLTCLKQSTYFDRREIQQWHKGFL--RDCPSGQLAREDFVKIYKQFFPFGSPEDF 64
Query: 411 VRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHA 470
L D D NG I + EFIT +R EE L AFE +D ++ GYIT +E+
Sbjct: 65 ANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTI 124
Query: 471 LKK-YNMGDAKT------------IKEIIAEVDIDNDGRINYEEFAAMMRKGNPDMVGN 516
+ Y M + +K+I +D + DG I +EF + +P ++G
Sbjct: 125 VASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKV-DPSIIGA 182
|
| >1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A Length = 108 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 1e-29
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 334 SDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFE 393
+D + +++ + + + LS+ +K++F+ +D D SG + +
Sbjct: 3 TDILSAEDIAAALQECQDPDTFEPQKF-FQTSGLSKMSASQVKDIFRFIDNDQSGYLDGD 61
Query: 394 ELKAGLPKLGT---RLSESEVRQLMEAADVDGNGTIDYIEFIT 433
ELK L K + L+ESE + LM+AAD DG+G I EF
Sbjct: 62 ELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQE 104
|
| >1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A Length = 108 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 4e-29
Identities = 24/110 (21%), Positives = 50/110 (45%), Gaps = 8/110 (7%)
Query: 402 LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGY 461
+ LS ++ ++ T + +F T ++++ + + F + D D SGY
Sbjct: 2 ITDILSAEDIAAALQE--CQDPDTFEPQKFF-QTSGLSKMSASQ-VKDIFRFIDNDQSGY 57
Query: 462 ITMEELEHALKKYNMGDAKT----IKEIIAEVDIDNDGRINYEEFAAMMR 507
+ +EL++ L+K+ + K ++ D D DG+I +EF M+
Sbjct: 58 LDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMVH 107
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 2e-29
Identities = 77/352 (21%), Positives = 135/352 (38%), Gaps = 83/352 (23%)
Query: 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREV 118
G+ V Y ++LG+G +G+ + + T + A K I N D + RE+
Sbjct: 1 GRVDRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIF-DAFQNSTDAQRTFREI 59
Query: 119 QIMHHLTGHRNIVELKGAY--EDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAAN 172
I+ L+GH NIV L ++ V L+ + + +I
Sbjct: 60 MILTELSGHENIVNLLNVLRADNDRDVYLVF------DYMETDLHAVIRANILEPVHKQY 113
Query: 173 LCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVG 232
+ Q++ V+ Y HS G++HRD+KP N L ++ + +K DFGLS F + +
Sbjct: 114 VVYQLIKVIKYLHSGGLLHRDMKPSNILLNA---ECHVKVADFGLSRSFVNIRRVTNNIP 170
Query: 233 SA----------------------YYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPP 268
+ +Y APE+L Y D+WS G IL +L G P
Sbjct: 171 LSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPI 230
Query: 269 FWGE----------------TEQSI--------------------------FDAILRGHI 286
F G + + + D +
Sbjct: 231 FPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKN 290
Query: 287 DFSS-DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKP 337
+P + + A D++ K+L +P +R+SA + L HP++ + + +++P
Sbjct: 291 LLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPNEEP 342
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 9e-29
Identities = 60/293 (20%), Positives = 109/293 (37%), Gaps = 42/293 (14%)
Query: 40 PRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKD-TKQQFACK 98
P S + + G ++ Y + G G YL ++ + K
Sbjct: 60 PYCGSPYSFLPQLNPGDIVA-------GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLK 112
Query: 99 SISSRKLINRDDVEDV---RREVQIMHHLTGHRNIVEL--KGAYEDRHSVN---LIMDLC 150
L++ D E E Q + + H +IV++ + DRH ++M+
Sbjct: 113 G-----LVHSGDAEAQAMAMAERQFLAEVV-HPSIVQIFNFVEHTDRHGDPVGYIVMEYV 166
Query: 151 AGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPL 210
G L A +++ + Y HS+G+++ DLKPEN + + + L
Sbjct: 167 GGQSLKRSK--GQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLT----EEQL 220
Query: 211 KATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFW 270
K D G + F L G+ + APE++R DI++ G L L +P
Sbjct: 221 KLIDLGAV---SRINSFGYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRN 277
Query: 271 GETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKER-LSAAEVL 322
G + + DP S ++++ + DP++R +A E+
Sbjct: 278 GRYVDGLPE----------DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMS 320
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 2e-28
Identities = 28/139 (20%), Positives = 53/139 (38%), Gaps = 17/139 (12%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLG-----TRLSESEVRQLMEAADVDGNGTIDYI 429
+ F ++ G + EEL+ L + G + S R ++ D D G + +
Sbjct: 2 VYTYFSAV-AGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFN 60
Query: 430 EFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKK--YNMGDAKTIKEIIA 487
F + + F D+D SG + EL A+ Y + +T+ I+
Sbjct: 61 AFKELWAAL------NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSP-QTLTTIVK 113
Query: 488 EVDIDNDGRINYEEFAAMM 506
+GRI ++++ A
Sbjct: 114 RY--SKNGRIFFDDYVACC 130
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165 | Back alignment and structure |
|---|
Score = 83.2 bits (206), Expect = 5e-19
Identities = 21/97 (21%), Positives = 39/97 (40%), Gaps = 8/97 (8%)
Query: 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEF 431
+ KE F ++D D SGT+ EL+ + +G RLS + +++ NG I + ++
Sbjct: 69 LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRY--SKNGRIFFDDY 126
Query: 432 ITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELE 468
+ + + L F D G +
Sbjct: 127 VACCVKL------RALTDFFRKRDHLQQGSANFIYDD 157
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 2e-10
Identities = 14/66 (21%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 451 FEYFDK--DNSGYITMEELEHALKKYNMGDAK------TIKEIIAEVDIDNDGRINYEEF 502
+ YF G + EEL+ L + + T + +IA +D D+ G++ + F
Sbjct: 3 YTYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAF 62
Query: 503 AAMMRK 508
+
Sbjct: 63 KELWAA 68
|
| >1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A Length = 190 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 2e-28
Identities = 40/177 (22%), Positives = 72/177 (40%), Gaps = 19/177 (10%)
Query: 354 KLKKVALKVIAE--NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE- 410
KLK ++ + +E+E+ + F SG + + + ++
Sbjct: 7 KLKPEVVEELTRKTYFTEKEVQQWYKGFIKDC--PSGQLDAAGFQKIYKQFFPFGDPTKF 64
Query: 411 VRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHA 470
+ D + +G I++ EFI A +R +E L AF+ +D DN GYIT E+
Sbjct: 65 ATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDI 124
Query: 471 LKK-YNMGDA------------KTIKEIIAEVDIDNDGRINYEEFAAMMRKGNPDMV 514
+ Y M K + I A +D + DG++ +EF + +P +V
Sbjct: 125 VDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKA-DPSIV 180
|
| >1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A Length = 198 | Back alignment and structure |
|---|
Score = 111 bits (278), Expect = 2e-28
Identities = 31/147 (21%), Positives = 57/147 (38%), Gaps = 17/147 (11%)
Query: 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLG-----TRLSESEVRQLMEAADVDGN 423
+ L F + G I +EL+ L + G + R ++ D D +
Sbjct: 29 GQTQDPLYGYFAA-VAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMS 87
Query: 424 GTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKK--YNMGDAKT 481
GT+ + EF +N + F FD D SG + +EL+ AL + + +
Sbjct: 88 GTMGFNEFKELWAVLN------GWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSP-QA 140
Query: 482 IKEIIAEVDIDNDGRINYEEFAAMMRK 508
+ I +G+I ++++ A K
Sbjct: 141 VNSIAKRY--STNGKITFDDYIACCVK 165
|
| >1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A Length = 198 | Back alignment and structure |
|---|
Score = 81.3 bits (201), Expect = 5e-18
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 8/97 (8%)
Query: 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEF 431
+ G ++ F S DTD SGT+ +EL+ L +G RLS V + + NG I + ++
Sbjct: 102 LNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRY--STNGKITFDDY 159
Query: 432 ITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELE 468
I + + L +F D G + +
Sbjct: 160 IACCVKL------RALTDSFRRRDTAQQGVVNFPYDD 190
|
| >1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A Length = 81 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 3e-28
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKK--YNMGDAKTIKEIIAEVDIDNDGRINY 499
+ EE + +AF+ FD + G I +E + ++K ++E + E D D +G I+
Sbjct: 5 DDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDI 64
Query: 500 EEFAAMMRKGNPDM 513
EF +++K +
Sbjct: 65 PEFMDLIKKSKNAL 78
|
| >1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A Length = 81 | Back alignment and structure |
|---|
Score = 74.9 bits (185), Expect = 4e-17
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLG-TRLSESEVRQLMEAADVDGNGT 425
+ +++ + FK D + G I F+E K + K+G L+++EV + M+ AD DGNG
Sbjct: 2 VRQDDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGV 61
Query: 426 IDYIEFITATMHMNRVERE 444
ID EF+ +E
Sbjct: 62 IDIPEFMDLIKKSKNALKE 80
|
| >2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} Length = 91 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 1e-27
Identities = 18/85 (21%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Query: 349 FRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSE 408
+ + L + EE+ L+ +F + D + SG + EE +A +L +
Sbjct: 3 HHHHHSSGRENLYFQGADGDGEELARLRSVFAACDANRSGRLEREEFRALCTELR--VRP 60
Query: 409 SEVRQLMEAADVDGNGTIDYIEFIT 433
++ + + D D +G I + EF
Sbjct: 61 ADAEAVFQRLDADRDGAITFQEFAR 85
|
| >2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} Length = 91 | Back alignment and structure |
|---|
Score = 88.6 bits (220), Expect = 8e-22
Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Query: 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEE 501
E L F D + SG + EE + + A + + +D D DG I ++E
Sbjct: 24 EELARLRSVFAACDANRSGRLEREEFRALCTELRVRPAD-AEAVFQRLDADRDGAITFQE 82
Query: 502 FAAMMRK 508
FA
Sbjct: 83 FARGFLG 89
|
| >2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A Length = 207 | Back alignment and structure |
|---|
Score = 108 bits (270), Expect = 2e-27
Identities = 34/180 (18%), Positives = 69/180 (38%), Gaps = 21/180 (11%)
Query: 353 NKLKKVALKVIAE--NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE 410
L K L+ + SEEE+ + F +G IT ++ ++ K
Sbjct: 14 GALSKEILEELQLNTKFSEEELCSWYQSFL--KDCPTGRITQQQFQSIYAKFFPDTDPKA 71
Query: 411 -VRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEH 469
+ + + D + +GT+D+ E++ A + + L AF +D D +G I+ E+
Sbjct: 72 YAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLE 131
Query: 470 ALK-----------KYNMGDAKTIKE----IIAEVDIDNDGRINYEEFAAMMRKGNPDMV 514
+ K D T ++ I ++D ++ +EF N +++
Sbjct: 132 IVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTLA-NKEIL 190
|
| >1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E Length = 183 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 4e-27
Identities = 36/177 (20%), Positives = 70/177 (39%), Gaps = 19/177 (10%)
Query: 356 KKVALKVIAE--NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE-VR 412
+ L+ + N ++ E+ L FK + SG + E K + S
Sbjct: 2 RPEGLEQLEAQTNFTKRELQVLYRGFK--NEXPSGVVNEETFKQIYAQFFPHGDASTYAH 59
Query: 413 QLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALK 472
L A D G++ + +F+TA + R E L F +D + GYI EE+ +K
Sbjct: 60 YLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVK 119
Query: 473 ---------KYNMGDAKTIKE----IIAEVDIDNDGRINYEEFAAMMRKGNPDMVGN 516
Y + T ++ ++D + DG + +EF ++ + +++ +
Sbjct: 120 AIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQE-DDNIMRS 175
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 4e-27
Identities = 64/325 (19%), Positives = 115/325 (35%), Gaps = 72/325 (22%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT--- 125
YI R+LG G F +L A K + K E E++++ +
Sbjct: 21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK----VYTEAAEDEIKLLQRVNDAD 76
Query: 126 -------GHRNIVELKGAYEDRHSVN----LIMDLCAGGELFDRIIAKGH--YSERAAAN 172
G +I++L + + ++ ++ G L I H
Sbjct: 77 NTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQ 135
Query: 173 LCRQMVTVVHYCHSM-GVMHRDLKPENFLFS---SSAEDSPLKATDFGLSVFFKPGDVFK 228
+ +Q++ + Y H G++H D+KPEN L S +K D G + + + +
Sbjct: 136 ISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACW--YDEHYT 193
Query: 229 DLVGSAYYVAPEV-LRRNYGAEADIWSAGVILYILLSGVPPFWGETEQS----------- 276
+ + + Y +PEV L +G ADIWS +++ L++G F + S
Sbjct: 194 NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQI 253
Query: 277 --------------------IFDAILRGHIDFSSDPWPNISSSAK-------------DI 303
F++ WP + D
Sbjct: 254 IELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDF 313
Query: 304 VKKMLHADPKERLSAAEVLNHPWMR 328
+ ML DP++R A ++NHPW++
Sbjct: 314 LSPMLQLDPRKRADAGGLVNHPWLK 338
|
| >2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} Length = 77 | Back alignment and structure |
|---|
Score = 102 bits (258), Expect = 6e-27
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
LSEE+ +KE F DT+ +G+I + ELK + LG + + E+ +LM D +GNG I
Sbjct: 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYI 60
Query: 427 DYIEFITATMHMNRVEREE 445
+ +F+ + +++ +
Sbjct: 61 GFDDFL--DIMTEKIKNRD 77
|
| >2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} Length = 77 | Back alignment and structure |
|---|
Score = 75.6 bits (187), Expect = 2e-17
Identities = 18/69 (26%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKK--YNMGDAKTIKEIIAEVDIDNDGRINY 499
E+++ + +AF+ FD + +G I EL+ A++ +++ + I E++ E D + +G I +
Sbjct: 4 EQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPE-ILELMNEYDREGNGYIGF 62
Query: 500 EEFAAMMRK 508
++F +M +
Sbjct: 63 DDFLDIMTE 71
|
| >2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} Length = 77 | Back alignment and structure |
|---|
Score = 40.6 bits (96), Expect = 5e-05
Identities = 10/38 (26%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 357 KVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEE 394
KVA++ + ++ + EI E+ D + +G I F++
Sbjct: 30 KVAMRALGFDVKKPEI---LELMNEYDREGNGYIGFDD 64
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 8e-27
Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 22/223 (9%)
Query: 115 RREVQIMHHLTGHRNIV------ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSER 168
RRE Q L H IV E + ++M+ G L D + +G + +
Sbjct: 60 RREAQNAAALN-HPAIVAVYDTGEAETPAGPLPY--IVMEYVDGVTLRDIVHTEGPMTPK 116
Query: 169 AAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF- 227
A + +++ H G++HRD+KP N + S + +K DFG++
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMIS---ATNAVKVMDFGIARAIADSGNSV 173
Query: 228 ---KDLVGSAYYVAPEVLRRNY-GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAI-- 281
++G+A Y++PE R + A +D++S G +LY +L+G PPF G++ S+ A
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV--AYQH 231
Query: 282 LRGHIDFSSDPWPNISSSAKDIVKKMLHADPKER-LSAAEVLN 323
+R S +S+ +V K L +P+ R +AAE+
Sbjct: 232 VREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRA 274
|
| >2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A Length = 86 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 9e-27
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+A + ++I + +FK DT+ G I+ EL L LG ++ EVR++M D DG
Sbjct: 1 MAAEDTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDG 59
Query: 423 NGTIDYIEFITATMHMNRVEREEHLYKAF 451
+G I + EF + + K F
Sbjct: 60 DGFISFDEFT--DFARANRGLVKDVSKIF 86
|
| >2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A Length = 86 | Back alignment and structure |
|---|
Score = 92.7 bits (231), Expect = 3e-23
Identities = 20/72 (27%), Positives = 34/72 (47%)
Query: 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEE 501
+ + F+ FD + G I+ EL ALK ++ ++AE+D D DG I+++E
Sbjct: 8 QDIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDE 67
Query: 502 FAAMMRKGNPDM 513
F R +
Sbjct: 68 FTDFARANRGLV 79
|
| >1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 Length = 78 | Back alignment and structure |
|---|
Score = 101 bits (255), Expect = 1e-26
Identities = 20/70 (28%), Positives = 36/70 (51%)
Query: 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFA 503
+ + + F+ FD + G I++ EL AL+ A ++ ++AE+D D DG I++ EF
Sbjct: 2 ADDMERIFKRFDTNGDGKISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEFI 61
Query: 504 AMMRKGNPDM 513
+ M
Sbjct: 62 SFCNANPGLM 71
|
| >1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 Length = 78 | Back alignment and structure |
|---|
Score = 80.3 bits (199), Expect = 5e-19
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDY 428
++ ++ +FK DT+ G I+ EL L LG+ ++ EV+++M D DG+G ID+
Sbjct: 2 ADD---MERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDF 57
Query: 429 IEFITATMHMNRVEREEHLYKAF 451
EFI + + + K F
Sbjct: 58 NEFI--SFCNANPGLMKDVAKVF 78
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 1e-26
Identities = 57/297 (19%), Positives = 106/297 (35%), Gaps = 59/297 (19%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH-HLTGHRN 129
+G+G++G + + + + A K SSR D + RE ++ + + H N
Sbjct: 12 LLECVGKGRYGEVWRGSWQG--ENVAVKIFSSR------DEKSWFRETELYNTVMLRHEN 63
Query: 130 IVELKGAYEDRHSVN------LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHY 183
I+ + D S + LI G L+D + + + + + + +
Sbjct: 64 ILGFIAS--DMTSRHSSTQLWLITHYHEMGSLYD-YLQLTTLDTVSCLRIVLSIASGLAH 120
Query: 184 CHS--------MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL----- 230
H + HRDLK +N L ++ D GL+V D+
Sbjct: 121 LHIEIFGTQGKPAIAHRDLKSKNILVK---KNGQCCIADLGLAVMHSQSTNQLDVGNNPR 177
Query: 231 VGSAYYVAPEVLR-------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSI-FDAIL 282
VG+ Y+APEVL + DIW+ G++L+ + + + F ++
Sbjct: 178 VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 237
Query: 283 RGHIDFSSD-----------PWPNISSSA------KDIVKKMLHADPKERLSAAEVL 322
F PN S ++K+ + +P RL+A +
Sbjct: 238 PNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIK 294
|
| >2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} Length = 71 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 2e-26
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---IKEIIAEVDIDNDGRIN 498
E L AF FD+D G+IT++EL A+ +G + +I E D+D DGR+N
Sbjct: 3 AGLEDLQVAFRAFDQDGDGHITVDELRRAMA--GLGQPLPQEELDAMIREADVDQDGRVN 60
Query: 499 YEEFAAMMRK 508
YEEFA M+ +
Sbjct: 61 YEEFARMLAQ 70
|
| >2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} Length = 71 | Back alignment and structure |
|---|
Score = 75.6 bits (187), Expect = 2e-17
Identities = 21/66 (31%), Positives = 36/66 (54%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
+ + L+ F++ D D G IT +EL+ + LG L + E+ ++ ADVD +G ++
Sbjct: 1 ARAGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVN 60
Query: 428 YIEFIT 433
Y EF
Sbjct: 61 YEEFAR 66
|
| >2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} Length = 71 | Back alignment and structure |
|---|
Score = 37.5 bits (88), Expect = 6e-04
Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Query: 357 KVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEE 394
+ A+ + + L +EE L M + D D G + +EE
Sbjct: 29 RRAMAGLGQPLPQEE---LDAMIREADVDQDGRVNYEE 63
|
| >2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens} Length = 107 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 2e-26
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Query: 345 RMKQFRAMNKLKKVAL---KVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPK 401
+ +Q ++++ K L K ++ ++ G KE + D + +G I LK L K
Sbjct: 1 KAQQEERLDEINKQFLDDPKYSSDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEK 60
Query: 402 LGTRLSESEVRQLMEAADVDGNGTIDYIEFIT 433
LG + E+++L+ T Y +F+
Sbjct: 61 LGVPKTHLELKKLIGEVSSGSGETFSYPDFLR 92
|
| >2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens} Length = 107 | Back alignment and structure |
|---|
Score = 82.0 bits (203), Expect = 3e-19
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---IKEIIAEVDIDNDGRIN 498
+ E + + FD + +G I + L+ L+K +G KT +K++I EV + +
Sbjct: 29 SKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEK--LGVPKTHLELKKLIGEVSSGSGETFS 86
Query: 499 YEEFAAMMRKG 509
Y +F MM
Sbjct: 87 YPDFLRMMLGK 97
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 107 bits (268), Expect = 8e-26
Identities = 63/341 (18%), Positives = 119/341 (34%), Gaps = 64/341 (18%)
Query: 35 DPPGPPRPSSSATSAT------SSSVGRVLGKPMEDVR---NTYIFGRELGRGQFGVTYL 85
+ P RP S + ++ G G P+ R T + +G+G+FG +
Sbjct: 1 EDPSLDRPFISEGTTLKDLIYDMTTSGSGSGLPLLVQRTIARTIVLQESIGKGRFGEVWR 60
Query: 86 VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH-HLTGHRNIVELKGAYEDRHSVN 144
+ ++ A K SSR + RE +I + H NI+ A +
Sbjct: 61 GKWRG--EEVAVKIFSSR------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 112
Query: 145 ----LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS--------MGVMHR 192
L+ D G LFD + + + L + + + H + HR
Sbjct: 113 TQLWLVSDYHEHGSLFD-YLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR 171
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL-----VGSAYYVAPEVLRRNYG 247
DLK +N L ++ D GL+V D+ VG+ Y+APEVL +
Sbjct: 172 DLKSKNILVK---KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSIN 228
Query: 248 AE-------ADIWSAGVILYILLSGVPPFWGETEQSI-FDAILRGHIDFSS--------- 290
+ ADI++ G++ + + + + + ++
Sbjct: 229 MKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQK 288
Query: 291 ------DPWPNISSSA--KDIVKKMLHADPKERLSAAEVLN 323
+ W + + I+++ +A+ RL+A +
Sbjct: 289 LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 329
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66 | Back alignment and structure |
|---|
Score = 99.2 bits (248), Expect = 9e-26
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITA 434
+ +FK +D + G +++EE+KA + K +E ++ + ++ D DGNG ID EF
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66 | Back alignment and structure |
|---|
Score = 67.6 bits (166), Expect = 1e-14
Identities = 14/62 (22%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 447 LYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT-IKEIIAEVDIDNDGRINYEEFAAM 505
F+ D + G ++ EE++ + K + ++ I +D D +G I+ EFA
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 506 MR 507
Sbjct: 62 YG 63
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66 | Back alignment and structure |
|---|
Score = 65.7 bits (161), Expect = 5e-14
Identities = 15/62 (24%), Positives = 24/62 (38%)
Query: 411 VRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHA 470
L + DV+G+G + Y E ++ E+ L F+ D D +G I E
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 471 LK 472
Sbjct: 62 YG 63
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 1e-06
Identities = 10/41 (24%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Query: 357 KVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKA 397
K + +E+ + + +FKS+D D +G I E
Sbjct: 23 KAFVSKKRAIKNEQLL---QLIFKSIDADGNGEIDQNEFAK 60
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66 | Back alignment and structure |
|---|
Score = 39.9 bits (94), Expect = 7e-05
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 482 IKEIIAEVDIDNDGRINYEEFAAMMRK 508
+ + E+D++ DG ++YEE A + K
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSK 28
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 1e-25
Identities = 77/405 (19%), Positives = 132/405 (32%), Gaps = 113/405 (27%)
Query: 33 KIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTK 92
+ ++ + + + Y +G G +G K K
Sbjct: 19 TVSGSQQEGQQRKQHHSSKPTASMPRPHSDWQIPDRYEIRHLIGTGSYGHVCEAYDKLEK 78
Query: 93 QQFACKSISSRKLINRDDVEDVR--REVQIMHHLTGHRNIVELK-----GAYEDRHSVNL 145
+ A K I + D ++ R RE+ I++ L H ++V++ E + +
Sbjct: 79 RVVAIKKIL---RVFEDLIDCKRILREIAILNRL-NHDHVVKVLDIVIPKDVEKFDELYV 134
Query: 146 IMDLCAGGELFD----RIIAKGHY-SERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFL 200
++ E+ D ++ Y +E L ++ V Y HS G++HRDLKP N L
Sbjct: 135 VL------EIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCL 188
Query: 201 FSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSA------------------------- 234
+ D +K DFGL+ P + L S
Sbjct: 189 VNQ---DCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVV 245
Query: 235 --YYVAPEVL--RRNYGAEADIWSAGVILYILL--------------------SGVPPFW 270
+Y APE++ + NY D+WS G I LL S P
Sbjct: 246 TRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSP 305
Query: 271 GETEQSIFDAILRGHID-----F------SSDPWPNISSS-------------------- 299
+ + F RG+ D F S + +
Sbjct: 306 DQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAER 365
Query: 300 -------AKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKP 337
A ++K+ML +P +R++ E L HP+ + A +
Sbjct: 366 FPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIAEVET 410
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 1e-25
Identities = 70/367 (19%), Positives = 129/367 (35%), Gaps = 107/367 (29%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR--REVQIM 121
V + YI +GRG +G YL K+T++ A K ++ + D ++ R RE+ I+
Sbjct: 23 HVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNR---MFEDLIDCKRILREITIL 79
Query: 122 HHLTGHRNIVELK--------GAYEDRHSVNLIM--DLCAGGELFDRIIAKGHY-SERAA 170
+ L I+ L +++ + V I DL ++ + +E
Sbjct: 80 NRL-KSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLK-------KLFKTPIFLTEEHI 131
Query: 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKD 229
+ ++ ++ H G++HRDLKP N L + D +K DFGL+ D
Sbjct: 132 KTILYNLLLGENFIHESGIIHRDLKPANCLLNQ---DCSVKVCDFGLARTINSEKDTNIV 188
Query: 230 LVGSA----------------------YYVAPEVL--RRNYGAEADIWSAGVILYILLS- 264
+Y APE++ + NY DIWS G I LL+
Sbjct: 189 NDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNM 248
Query: 265 ----------------GVPPFWGETEQSIFDAILRGHID-------------------FS 289
G F +++ + + D +
Sbjct: 249 LQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNIN 308
Query: 290 SD---------------PW----PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330
P+IS ++++ ML +P +R++ + L+HP+++
Sbjct: 309 KPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDV 368
Query: 331 GDASDKP 337
+
Sbjct: 369 RKKKLEN 375
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 2e-25
Identities = 41/295 (13%), Positives = 76/295 (25%), Gaps = 43/295 (14%)
Query: 32 LKIDPPGPPRPSSSATSATSSSV--GRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHK 89
+ D P SSA V R+ Y G +
Sbjct: 1 IAFDALREPDRESSAPPDDVQLVPGARIAN-------GRYRLLIFHGGVPPLQFWQALDT 53
Query: 90 DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDL 149
+Q A + + ++ D +++ + + + + R ++ +
Sbjct: 54 ALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRID-KPGVARVLDVVHTRAGGLVVAEW 112
Query: 150 CAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP 209
GG L + +A S A + + H GV P S
Sbjct: 113 IRGGSLQE--VADTSPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSID----- 165
Query: 210 LKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPF 269
GDV ++ + + DI G LY LL P
Sbjct: 166 --------------GDV---VLAYPATMPDA------NPQDDIRGIGASLYALLVNRWPL 202
Query: 270 WGETEQSIFDAILRGHIDFSSDPW---PNISSSAKDIVKKMLHADPKERLSAAEV 321
+S R +P +I + + + D R ++ +
Sbjct: 203 PEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIRSASTLL 257
|
| >2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} Length = 92 | Back alignment and structure |
|---|
Score = 98.1 bits (245), Expect = 4e-25
Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 437 HMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---IKEIIAEVDIDN 493
HM+ + EE L +AF+ FDKD +GYI+ EL H + N+G+ T ++++I E D+D
Sbjct: 2 HMDT-DAEEELKEAFKVFDKDQNGYISASELRHVMI--NLGEKLTDEEVEQMIKEADLDG 58
Query: 494 DGRINYEEFAAMMRKGNPDMVGNRRR 519
DG++NYEEF MM GN
Sbjct: 59 DGQVNYEEFVKMMMTVRGGGGGNGWS 84
|
| >2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} Length = 92 | Back alignment and structure |
|---|
Score = 83.0 bits (206), Expect = 1e-19
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGT 425
++ + LKE FK D D +G I+ EL+ + LG +L++ EV Q+++ AD+DG+G
Sbjct: 2 HMDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQ 61
Query: 426 IDYIEFI---TATMHMNRVEREEHLYKAF 451
++Y EF+ L + F
Sbjct: 62 VNYEEFVKMMMTVRGGGGGNGWSRLRRKF 90
|
| >2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} Length = 92 | Back alignment and structure |
|---|
Score = 40.3 bits (95), Expect = 1e-04
Identities = 12/61 (19%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Query: 357 KVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLME 416
+ + + E L++EE+ ++M K D D G + +EE + + + +L
Sbjct: 32 RHVMINLGEKLTDEEV---EQMIKEADLDGDGQVNYEEFVKMMMTVRGGGGGNGWSRLRR 88
Query: 417 A 417
Sbjct: 89 K 89
|
| >2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} Length = 94 | Back alignment and structure |
|---|
Score = 97.0 bits (242), Expect = 1e-24
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 423 NGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT- 481
+ E + M + EE + +AF DKD +GYI+ EL H + N+G+ T
Sbjct: 7 HHHGSSGENLYFQSLMKDTDSEEEIREAFRVEDKDGNGYISAAELRHVMT--NLGEKLTD 64
Query: 482 --IKEIIAEVDIDNDGRINYEEFAAMMRK 508
+ E+I E DID DG++NYEEF MM
Sbjct: 65 EEVDEMIREADIDGDGQVNYEEFVQMMTA 93
|
| >2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} Length = 94 | Back alignment and structure |
|---|
Score = 74.2 bits (183), Expect = 1e-16
Identities = 25/71 (35%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+ + SEEE ++E F+ D D +G I+ EL+ + LG +L++ EV +++ AD+DG
Sbjct: 22 MKDTDSEEE---IREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 78
Query: 423 NGTIDYIEFIT 433
+G ++Y EF+
Sbjct: 79 DGQVNYEEFVQ 89
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 1e-24
Identities = 67/332 (20%), Positives = 118/332 (35%), Gaps = 74/332 (22%)
Query: 63 EDVRNTYIFGRELGRGQFG-VTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIM 121
+ ++ Y LG G FG V + H K Q A K I + E R E+ ++
Sbjct: 15 DWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG----KYREAARLEINVL 70
Query: 122 HHL-----TGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHY---SERAAANL 173
+ V + + + + +L G F+ + + ++ ++
Sbjct: 71 KKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFE-FLKENNFQPYPLPHVRHM 128
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA----------------EDSPLKATDFGL 217
Q+ + + H + H DLKPEN LF +S +++ ++ DFG
Sbjct: 129 AYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGS 188
Query: 218 SVFFKPGDVFKDLVGSAYYVAPEV-LRRNYGAEADIWSAGVILYILLSGVPPFWGETEQS 276
+ F + +V + +Y PEV L + D+WS G IL+ G F +
Sbjct: 189 ATF--DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 246
Query: 277 IFDAILR--GHID------------FSSD--PWPNISSSAK------------------- 301
+ + G I F W SS +
Sbjct: 247 HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLE 306
Query: 302 -----DIVKKMLHADPKERLSAAEVLNHPWMR 328
D++++ML DP +R++ AE L HP+
Sbjct: 307 HVQLFDLMRRMLEFDPAQRITLAEALLHPFFA 338
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 2e-24
Identities = 68/330 (20%), Positives = 116/330 (35%), Gaps = 73/330 (22%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
+ V Y + +G+G FG Q A K + + K E++I+
Sbjct: 93 DHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK----RFHRQAAEEIRILE 148
Query: 123 HL-----TGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHY---SERAAANLC 174
HL N++ + + R+ + + +L L++ +I K + S
Sbjct: 149 HLRKQDKDNTMNVIHMLENFTFRNHICMTFELL-SMNLYE-LIKKNKFQGFSLPLVRKFA 206
Query: 175 RQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSA 234
++ + H ++H DLKPEN L S +K DFG S ++ V+ + S
Sbjct: 207 HSILQCLDALHKNRIIHCDLKPENILLKQQ-GRSGIKVIDFG-SSCYEHQRVYTYIQ-SR 263
Query: 235 YYVAPEV-LRRNYGAEADIWSAGVILYILLS---------------------GVPPFW-- 270
+Y APEV L YG D+WS G IL LL+ G+P
Sbjct: 264 FYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLL 323
Query: 271 --GETEQSIFD--AILRGHIDFSSDPWPNISSSAK------------------------- 301
+ ++ R + + + +
Sbjct: 324 DASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDP 383
Query: 302 ---DIVKKMLHADPKERLSAAEVLNHPWMR 328
D +K+ L DP R++ + L HPW+R
Sbjct: 384 LFLDFLKQCLEWDPAVRMTPGQALRHPWLR 413
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 5e-24
Identities = 65/332 (19%), Positives = 115/332 (34%), Gaps = 59/332 (17%)
Query: 36 PPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYI-FGRELGRGQFGVTYLVTHKDTKQQ 94
PPG S +S S G L ++ I +++G+G++G ++ + ++
Sbjct: 6 PPGESLRDLIEQSQSSGS-GSGLPLLVQRTIAKQIQMVKQIGKGRYGEVWMGKWRG--EK 62
Query: 95 FACKSISSRKLINRDDVEDVRREVQIMH-HLTGHRNIVELKGAYEDRHSVN----LIMDL 149
A K + + RE +I L H NI+ A LI D
Sbjct: 63 VAVKVFFTT------EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDY 116
Query: 150 CAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS--------MGVMHRDLKPENFLF 201
G L+D + ++ L V+ + + H+ + HRDLK +N L
Sbjct: 117 HENGSLYD-YLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILV 175
Query: 202 SSSAEDSPLKATDFGLSVFFKPGDVFKDL-----VGSAYYVAPEVLRRNYGAE------- 249
++ D GL+V F D+ VG+ Y+ PEVL +
Sbjct: 176 K---KNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIM 232
Query: 250 ADIWSAGVILYILLSGV----------PPFWGET-EQSIFDAI--------LRGHIDFSS 290
AD++S G+IL+ + P+ ++ + LR +
Sbjct: 233 ADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFP-NR 291
Query: 291 DPWPNISSSAKDIVKKMLHADPKERLSAAEVL 322
++ + +P RL+A V
Sbjct: 292 WSSDECLRQMGKLMTECWAHNPASRLTALRVK 323
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 1e-23
Identities = 69/334 (20%), Positives = 110/334 (32%), Gaps = 74/334 (22%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
+ N ++ R++G G FG L H D K+ +A K + + K + E I+
Sbjct: 31 MLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK----KYTRSAKIEADILK 86
Query: 123 HL----TGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH--YSERAAANLCRQ 176
+ + NIV+ G + + LI + G L++ I + + C +
Sbjct: 87 KIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIE 145
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV----- 231
++ ++Y M + H DLKPEN L + L K
Sbjct: 146 ILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLID 205
Query: 232 -GSA--------------YYVAPEV-LRRNYGAEADIWSAGVILYILLSGVPPFWGETEQ 275
G A Y APEV L + +D+WS G +L L +G F
Sbjct: 206 FGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHM 265
Query: 276 SIFDAILR--GHID---------------FSSDP----WPNISSSAK------------- 301
+ I + D WP +SS
Sbjct: 266 EHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYK 325
Query: 302 --------DIVKKMLHADPKERLSAAEVLNHPWM 327
D + +L DP R S AE+L H ++
Sbjct: 326 IIKHELFCDFLYSILQIDPTLRPSPAELLKHKFL 359
|
| >2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A Length = 150 | Back alignment and structure |
|---|
Score = 95.3 bits (237), Expect = 2e-23
Identities = 27/121 (22%), Positives = 52/121 (42%), Gaps = 8/121 (6%)
Query: 343 LTRMKQFRAMNKLKKVAL---KVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGL 399
+ + +Q R + ++ + L K E E++ KE + D +N G I LK +
Sbjct: 17 ILKARQERRLAEINREFLCDQKYSDEENLPEKLTAFKEKYMEFDLNNEGEIDLMSLKRMM 76
Query: 400 PKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
KLG + E+++++ + TI Y +F ++M +R L K F+ +
Sbjct: 77 EKLGVPKTHLEMKKMISEVTGGVSDTISYRDF----VNMMLGKRSAVL-KLVMMFEGKAN 131
Query: 460 G 460
Sbjct: 132 E 132
|
| >2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A Length = 150 | Back alignment and structure |
|---|
Score = 81.1 bits (200), Expect = 2e-18
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---IKEIIAEVDIDNDGRIN 498
E+ + + FD +N G I + L+ ++K +G KT +K++I+EV I+
Sbjct: 47 EKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEK--LGVPKTHLEMKKMISEVTGGVSDTIS 104
Query: 499 YEEFAAMMRKGN 510
Y +F MM
Sbjct: 105 YRDFVNMMLGKR 116
|
| >1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* Length = 183 | Back alignment and structure |
|---|
Score = 95.2 bits (237), Expect = 5e-23
Identities = 33/170 (19%), Positives = 72/170 (42%), Gaps = 23/170 (13%)
Query: 366 NLSEEEIMGLKEMFK--------SMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEA 417
L+++EI+ F S+++ + FE++ + LP+L + + ++
Sbjct: 13 FLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPFKERICRVFST 71
Query: 418 ADVDGNGTIDYIEFITA-TMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALK---- 472
+ ++ + +F+ ++ + + + AF FD D+ G + E+L +
Sbjct: 72 SP--AKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTG 129
Query: 473 ---KYNMGD---AKTIKEIIAEVDIDNDGRINYEEFAAMMRKGNPDMVGN 516
+ + I I+ E DID DG IN EF ++ + +PD +
Sbjct: 130 EGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISR-SPDFASS 178
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397 | Back alignment and structure |
|---|
Score = 99 bits (249), Expect = 5e-23
Identities = 67/375 (17%), Positives = 118/375 (31%), Gaps = 114/375 (30%)
Query: 60 KPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQ 119
K + Y R+LG G F +L K+ A K + S E E++
Sbjct: 30 KIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKS----AEHYTETALDEIR 85
Query: 120 IMHHLT-------GHRNIVELKGAYE-----DRHSVNLIMDLCAGGELFDRIIAKGH--Y 165
++ + +V+L ++ H ++ ++ G L II +
Sbjct: 86 LLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHIC-MVFEV-LGHHLLKWIIKSNYQGL 143
Query: 166 SERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSS-------------------- 204
+ +Q++ + Y H+ ++H D+KPEN L S +
Sbjct: 144 PLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAP 203
Query: 205 --------------------------AEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVA 238
AE +K D G + + F + + + Y +
Sbjct: 204 PPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACW--VHKHFTEDIQTRQYRS 261
Query: 239 PEV-LRRNYGAEADIWSAGVILYILLSGVPPF--WGETEQSIFDAILRGHID-------- 287
EV + Y ADIWS + + L +G F E + + + I+
Sbjct: 262 LEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRK 321
Query: 288 -----------FSSD----------PWPNISSSAK-------------DIVKKMLHADPK 313
F+ PW + D + ML P+
Sbjct: 322 LIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPE 381
Query: 314 ERLSAAEVLNHPWMR 328
+R +AAE L HPW+
Sbjct: 382 KRATAAECLRHPWLN 396
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 99.6 bits (249), Expect = 6e-23
Identities = 59/277 (21%), Positives = 106/277 (38%), Gaps = 41/277 (14%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
+ G ++GRG FG + + A KS R+ + D +E +I+ +
Sbjct: 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSC--RETLPPDLKAKFLQEARILKQYS 170
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERA-----AANLCRQMVTV 180
H NIV L G + + ++M+L GG+ + +G + M
Sbjct: 171 -HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGME-- 227
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV--- 237
Y S +HRDL N L + E + LK +DFG+S ++ Y
Sbjct: 228 --YLESKCCIHRDLAARNCLVT---EKNVLKISDFGMS---------REEADGVYAASGG 273
Query: 238 ---------APEVLRRN-YGAEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHI 286
APE L Y +E+D+WS G++L+ G P+ + Q + + +G
Sbjct: 274 LRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGR 333
Query: 287 DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323
+ ++++ +P +R S + +
Sbjct: 334 ---LPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQ 367
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339 | Back alignment and structure |
|---|
Score = 98.5 bits (246), Expect = 9e-23
Identities = 76/329 (23%), Positives = 120/329 (36%), Gaps = 72/329 (21%)
Query: 63 EDVRNTYIFGRELGRGQFG-VTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIM 121
+ + Y LG G FG V + HK + A K + + E R E+Q++
Sbjct: 10 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD----RYCEAARSEIQVL 65
Query: 122 HHL-----TGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH--YSERAAANLC 174
HL V++ +E + ++ +L G +D I G + +
Sbjct: 66 EHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMA 124
Query: 175 RQMVTVVHYCHSMGVMHRDLKPENFLFSSSA----------------EDSPLKATDFGLS 218
Q+ V++ HS + H DLKPEN LF S + +K DFG +
Sbjct: 125 YQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA 184
Query: 219 VFFKPGDVFKDLVGSAYYVAPEV-LRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSI 277
+ + LV + +Y APEV L + D+WS G IL G F +
Sbjct: 185 TY--DDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEH 242
Query: 278 FDAILR--GHID------------FSSD--PWPNISSSAK-------------------- 301
+ R G + F D W SS+ +
Sbjct: 243 LAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEH 302
Query: 302 ----DIVKKMLHADPKERLSAAEVLNHPW 326
D+++KML DP +R++ E L HP+
Sbjct: 303 ERLFDLIQKMLEYDPAKRITLREALKHPF 331
|
| >1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A Length = 83 | Back alignment and structure |
|---|
Score = 90.8 bits (226), Expect = 1e-22
Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
Query: 442 EREEHLYKAFEYFDKDNSGYITMEELEHALK----KYNMGDAKT---IKEIIAEVDIDND 494
+ + L AF+ D + GY+T EL+ + + K ++I D ++D
Sbjct: 4 KVKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSD 63
Query: 495 GRINYEEFAAMMRK 508
G+I+ EEF +
Sbjct: 64 GKISKEEFLNANAE 77
|
| >1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A Length = 83 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 4e-14
Identities = 16/73 (21%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLS------ESEVRQLMEAADV 420
++ + L+ FK +D + G +T EL+ + L + + +L++ AD
Sbjct: 1 MACKVKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADK 60
Query: 421 DGNGTIDYIEFIT 433
+ +G I EF+
Sbjct: 61 NSDGKISKEEFLN 73
|
| >1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 Length = 105 | Back alignment and structure |
|---|
Score = 91.4 bits (227), Expect = 1e-22
Identities = 15/82 (18%), Positives = 29/82 (35%), Gaps = 1/82 (1%)
Query: 432 ITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVD 490
I A +H + + FE FD + I+ EE + + + E+
Sbjct: 11 ILARLHKAVTSHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMP 70
Query: 491 IDNDGRINYEEFAAMMRKGNPD 512
++ GR+ Y +F +
Sbjct: 71 VNAKGRLKYPDFLSRFSSETAA 92
|
| >1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 Length = 105 | Back alignment and structure |
|---|
Score = 89.8 bits (223), Expect = 6e-22
Identities = 17/82 (20%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Query: 356 KKVALKVIAENLSE---EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVR 412
A + I L + + + F++ DT + TI+ EE +A + L++ +
Sbjct: 4 MATADRDILARLHKAVTSHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFD 63
Query: 413 QLMEAADVDGNGTIDYIEFITA 434
+L V+ G + Y +F++
Sbjct: 64 RLWNEMPVNAKGRLKYPDFLSR 85
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483 | Back alignment and structure |
|---|
Score = 99.3 bits (247), Expect = 2e-22
Identities = 63/222 (28%), Positives = 98/222 (44%), Gaps = 29/222 (13%)
Query: 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHL 124
V N + GR++G G FG YL T+ T ++ A K + + + E +I L
Sbjct: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLEN-----VKTKHPQLLYESKIYRIL 59
Query: 125 TGHRNIVELKGA-YEDRHSVNLIMDLCAG---GELFDRIIAKGHYSERAAANLCRQMVTV 180
G I ++ E ++V L+MDL G +LF+ S + L QM+
Sbjct: 60 QGGTGIPNVRWFGVEGDYNV-LVMDLL-GPSLEDLFNFC--SRKLSLKTVLMLADQMINR 115
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK--------PGDVFKDLVG 232
V + HS +HRD+KP+NFL + + DFGL+ ++ P K+L G
Sbjct: 116 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTG 175
Query: 233 SAYYVAPEVLRRNYGAEA----DIWSAGVILYILLSGVPPFW 270
+A Y + + + G E D+ S G +L L G P W
Sbjct: 176 TARYAS---VNTHLGIEQSRRDDLESLGYVLMYFLRGSLP-W 213
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298 | Back alignment and structure |
|---|
Score = 96.3 bits (240), Expect = 2e-22
Identities = 62/222 (27%), Positives = 96/222 (43%), Gaps = 27/222 (12%)
Query: 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHL 124
V Y GR +G G FGV + T+ QQ A K R D +R E + L
Sbjct: 8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEP-----RRSDAPQLRDEYRTYKLL 62
Query: 125 TGHRNIVELKGA-YEDRHSVNLIMDLCAGGELFD-RIIAKGHYSERAAANLCRQMVTVVH 182
G I + E H+V L++DL G L D + +S + A +QM+ V
Sbjct: 63 AGCTGIPNVYYFGQEGLHNV-LVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQ 120
Query: 183 YCHSMGVMHRDLKPENFLF--SSSAEDSPLKATDFGLSVFFK--------PGDVFKDLVG 232
H +++RD+KP+NFL +S + + DFG+ F++ P K+L G
Sbjct: 121 SIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSG 180
Query: 233 SAYYVAPEVLRRNYGAEA----DIWSAGVILYILLSGVPPFW 270
+A Y++ + + G E D+ + G + L G P W
Sbjct: 181 TARYMS---INTHLGREQSRRDDLEALGHVFMYFLRGSLP-W 218
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 96.7 bits (241), Expect = 3e-22
Identities = 60/296 (20%), Positives = 101/296 (34%), Gaps = 57/296 (19%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
RG+FG + + + A K + EV + + H NI
Sbjct: 28 LLEVKARGRFGCVWKAQLLN--EYVAVKIFPIQD----KQSWQNEYEVYSLPGMK-HENI 80
Query: 131 VELKGAYEDRHSVN------LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYC 184
++ GA ++ + LI G L D + S ++ M + Y
Sbjct: 81 LQFIGA--EKRGTSVDVDLWLITAFHEKGSLSD-FLKANVVSWNELCHIAETMARGLAYL 137
Query: 185 HSM----------GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD---LV 231
H + HRD+K +N L + DFGL++ F+ G D V
Sbjct: 138 HEDIPGLKDGHKPAISHRDIKSKNVLLK---NNLTACIADFGLALKFEAGKSAGDTHGQV 194
Query: 232 GSAYYVAPEVLRRNYGAE------ADIWSAGVILYILLSGVPPFWGETE--QSIFDAILR 283
G+ Y+APEVL + D+++ G++L+ L S G + F+ +
Sbjct: 195 GTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIG 254
Query: 284 GHIDFSS---------------DPWPNISSSAK--DIVKKMLHADPKERLSAAEVL 322
H D W + A + +++ D + RLSA V
Sbjct: 255 QHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVG 310
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296 | Back alignment and structure |
|---|
Score = 95.5 bits (238), Expect = 4e-22
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 25/218 (11%)
Query: 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHL 124
V N Y GR++G G FG YL T ++ A K + + E +I +
Sbjct: 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLEC-----VKTKHPQLHIESKIYKMM 61
Query: 125 TGHRNIVELKGA-YEDRHSVNLIMDLCAGGELFD-RIIAKGHYSERAAANLCRQMVTVVH 182
G I ++ E ++V ++M+L G L D +S + L QM++ +
Sbjct: 62 QGGVGIPTIRWCGAEGDYNV-MVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIE 119
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK--------PGDVFKDLVGSA 234
Y HS +HRD+KP+NFL + + + DFGL+ ++ P K+L G+A
Sbjct: 120 YIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTA 179
Query: 235 YYVAPEVLRRNYGAEA----DIWSAG-VILYILLSGVP 267
Y + + + G E D+ S G V++Y L +P
Sbjct: 180 RYAS---INTHLGIEQSRRDDLESLGYVLMYFNLGSLP 214
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 96.1 bits (240), Expect = 5e-22
Identities = 53/238 (22%), Positives = 93/238 (39%), Gaps = 33/238 (13%)
Query: 66 RNTYIFGRELGRGQFGV----TYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIM 121
+ + LG G FG ++ + K A K + R+ + +++ E +M
Sbjct: 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVM 71
Query: 122 HHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTV 180
+ + ++ L G +V LI L G L D + K + + N C Q+
Sbjct: 72 ASVD-NPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV--- 237
++Y ++HRDL N L + +K TDFGL+ + Y
Sbjct: 130 MNYLEDRRLVHRDLAARNVLVKT---PQHVKITDFGLAKLLGAEE--------KEYHAEG 178
Query: 238 --------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
A E + R Y ++D+WS GV ++ L++ G P+ G I + +G
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 236
|
| >1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A Length = 147 | Back alignment and structure |
|---|
Score = 91.1 bits (226), Expect = 6e-22
Identities = 23/125 (18%), Positives = 46/125 (36%), Gaps = 5/125 (4%)
Query: 336 KPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEEL 395
K + + ++ +NK K + ++ K + D + +G I L
Sbjct: 11 KAFGLLKAQQEERLEGINKQFLDDPKYSNDEDLPSKLEAFKVKYMEFDLNGNGDIDIMSL 70
Query: 396 KAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFD 455
K L KLG + E+++L+ T Y +F + M +R L + ++
Sbjct: 71 KRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDF----LRMMLGKRSAIL-RMILMYE 125
Query: 456 KDNSG 460
+ N
Sbjct: 126 EKNKE 130
|
| >1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A Length = 147 | Back alignment and structure |
|---|
Score = 87.7 bits (217), Expect = 1e-20
Identities = 23/111 (20%), Positives = 43/111 (38%), Gaps = 8/111 (7%)
Query: 403 GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYI 462
G + Q E + +D ++ + + E + FD + +G I
Sbjct: 9 GGKAFGLLKAQQEERLEGINKQFLDDPKYS---NDEDLPSKLEAFKVKYMEFDLNGNGDI 65
Query: 463 TMEELEHALKKYNMGDAKT---IKEIIAEVDIDNDGRINYEEFAAMMRKGN 510
+ L+ L+K +G KT +K +I EV ++ +Y +F MM
Sbjct: 66 DIMSLKRMLEK--LGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLGKR 114
|
| >1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 Length = 67 | Back alignment and structure |
|---|
Score = 87.9 bits (219), Expect = 9e-22
Identities = 15/64 (23%), Positives = 30/64 (46%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITA 434
K +F+ D + G ++ +E + ++ ++ + E DVDGNG ++ EF +
Sbjct: 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSC 62
Query: 435 TMHM 438
M
Sbjct: 63 IEKM 66
|
| >1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 Length = 67 | Back alignment and structure |
|---|
Score = 81.4 bits (202), Expect = 2e-19
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 447 LYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---IKEIIAEVDIDNDGRINYEEFA 503
+ FE FDK+ G ++++E T I + E+D+D +G +N +EF
Sbjct: 3 AKRVFEKFDKNKDGKLSLDEFREVAL--AFSPYFTQEDIVKFFEEIDVDGNGELNADEFT 60
Query: 504 AMMRK 508
+ + K
Sbjct: 61 SCIEK 65
|
| >1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 Length = 67 | Back alignment and structure |
|---|
Score = 41.3 bits (98), Expect = 3e-05
Identities = 7/38 (18%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Query: 357 KVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEE 394
+ + ++E+I + F+ +D D +G + +E
Sbjct: 24 REVALAFSPYFTQEDI---VKFFEEIDVDGNGELNADE 58
|
| >2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A Length = 214 | Back alignment and structure |
|---|
Score = 91.8 bits (228), Expect = 2e-21
Identities = 37/184 (20%), Positives = 74/184 (40%), Gaps = 25/184 (13%)
Query: 354 KLKKVALKVIAE--NLSEEEIMGLKEMFK--------SMDTDNSGTITFEELKAGLPKLG 403
+L K L + L+++EI+ F S+++ + FE++ + LP+L
Sbjct: 30 RLSKELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELK 88
Query: 404 TRLSESEVRQLMEAADVDGNGTIDYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYI 462
+ + ++ + ++ + +F+ + + + AF FD D+ G +
Sbjct: 89 ANPFKERICRVFSTSP--AKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTL 146
Query: 463 TMEELEHALKKYNMGDAKT----------IKEIIAEVDIDNDGRINYEEFAAMMRKGNPD 512
E+L + T I I+ E DID DG IN EF ++ + +PD
Sbjct: 147 NREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISR-SPD 205
Query: 513 MVGN 516
+
Sbjct: 206 FASS 209
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330 | Back alignment and structure |
|---|
Score = 94.0 bits (234), Expect = 2e-21
Identities = 47/220 (21%), Positives = 91/220 (41%), Gaps = 27/220 (12%)
Query: 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHL 124
V + G+++G G FG L + T + A K + K + E + L
Sbjct: 7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIK-LEPMK----SRAPQLHLEYRFYKQL 61
Query: 125 TGHRNIVELKGA-YEDRHSVNLIMDLCAGGELFD-RIIAKGHYSERAAANLCRQMVTVVH 182
I ++ +++ ++++L G L D + +S + + Q+++ +
Sbjct: 62 GSGDGIPQVYYFGPCGKYNA-MVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRME 119
Query: 183 YCHSMGVMHRDLKPENFLF--SSSAEDSPLKATDFGLSVFFK--------PGDVFKDLVG 232
Y HS +++RD+KPENFL + + DF L+ + P K L G
Sbjct: 120 YVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTG 179
Query: 233 SAYYVAPEVLRRNYGAEA----DIWSAG-VILYILLSGVP 267
+A Y++ + + G E D+ + G + +Y L +P
Sbjct: 180 TARYMS---INTHLGKEQSRRDDLEALGHMFMYFLRGSLP 216
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 92.3 bits (230), Expect = 6e-21
Identities = 58/238 (24%), Positives = 101/238 (42%), Gaps = 20/238 (8%)
Query: 59 GKPMEDV----RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDV 114
G P D R +LG GQ+G Y K A K++ + +VE+
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE----DTMEVEEF 56
Query: 115 RREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAAN 172
+E +M + H N+V+L G +I + G L D R + S
Sbjct: 57 LKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY 115
Query: 173 LCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVG 232
+ Q+ + + Y +HRDL N L E+ +K DFGLS GD + G
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAG 171
Query: 233 SAYYV---APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
+ + + APE L + ++D+W+ GV+L+ + + G+ P+ G +++ + + +
Sbjct: 172 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 229
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 2e-20
Identities = 65/302 (21%), Positives = 114/302 (37%), Gaps = 42/302 (13%)
Query: 66 RNTYIFGRELGRGQFGVTYL-----VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
R R LG G FG Y + + + Q A K++ ++ + D D E I
Sbjct: 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQDELDFLMEALI 86
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTV 180
+ H+NIV G ++M+L AGG+L + + ++ ++ V
Sbjct: 87 ISKFN-HQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 145
Query: 181 V-------HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Y +HRD+ N L + K DFG++ +D+ +
Sbjct: 146 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA---------RDIYRA 196
Query: 234 AYYV------------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFD 279
+YY PE + ++ D WS GV+L+ + S G P+ ++ Q + +
Sbjct: 197 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 256
Query: 280 AILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH-PWMRVDGDASDKPL 338
+ G DP N I+ + P++R + A +L + D D + L
Sbjct: 257 FVTSGGR---MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINTAL 313
Query: 339 DI 340
I
Sbjct: 314 PI 315
|
| >3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C Length = 143 | Back alignment and structure |
|---|
Score = 86.6 bits (214), Expect = 2e-20
Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 24/116 (20%)
Query: 393 EELKAGLPKLGTRLSESEVR-QLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAF 451
E L+ + K +S E++ + D DGN +D +E TA H+++ E E
Sbjct: 51 EHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSE------ 104
Query: 452 EYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507
+ ++ +EL I ++ + D +NDG I+Y EFA ++
Sbjct: 105 ------QAPLMSEDELI-----------NIIDGVLRDDDKNNDGYIDYAEFAKSLQ 143
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382 | Back alignment and structure |
|---|
Score = 92.1 bits (229), Expect = 2e-20
Identities = 56/223 (25%), Positives = 96/223 (43%), Gaps = 18/223 (8%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
E + Y +G+G FG + ++ A K I ++K + EV+++
Sbjct: 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQ----AQIEVRLLE 105
Query: 123 HL-----TGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH--YSERAAANLCR 175
+ IV LK + R+ + L+ ++ L+D + S +
Sbjct: 106 LMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQ 164
Query: 176 QMVTVVHYCHS--MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
QM T + + + + ++H DLKPEN L + + S +K DFG S +++ + S
Sbjct: 165 QMCTALLFLATPELSIIHCDLKPENILLCNP-KRSAIKIVDFG-SSCQLGQRIYQYIQ-S 221
Query: 234 AYYVAPEV-LRRNYGAEADIWSAGVILYILLSGVPPFWGETEQ 275
+Y +PEV L Y D+WS G IL + +G P F G E
Sbjct: 222 RFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEV 264
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 2e-04
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 301 KDIVKKMLHADPKERLSAAEVLNHPWMR 328
KD++ +ML DPK R+ L H + +
Sbjct: 350 KDLILRMLDYDPKTRIQPYYALQHSFFK 377
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 91.2 bits (227), Expect = 2e-20
Identities = 53/238 (22%), Positives = 92/238 (38%), Gaps = 33/238 (13%)
Query: 66 RNTYIFGRELGRGQFGV----TYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIM 121
+ + LG G FG ++ + K A K + R+ + +++ E +M
Sbjct: 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVM 71
Query: 122 HHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTV 180
+ + ++ L G +V LI L G L D + K + + N C Q+
Sbjct: 72 ASVD-NPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV--- 237
++Y ++HRDL N L +K TDFGL+ + Y
Sbjct: 130 MNYLEDRRLVHRDLAARNVLVK---TPQHVKITDFGLAKLLGAEE--------KEYHAEG 178
Query: 238 --------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
A E + R Y ++D+WS GV ++ L++ G P+ G I + +G
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 236
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 93.8 bits (233), Expect = 2e-20
Identities = 73/316 (23%), Positives = 113/316 (35%), Gaps = 40/316 (12%)
Query: 21 PDTGPGHHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKPMEDV----RNTYIFGRELG 76
+ P N + S + A P R GR +G
Sbjct: 340 LPSIPKLANNEKQGVRSHTVSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERIELGRCIG 399
Query: 77 RGQFGVTY---LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
GQFG + ++ ++ A K+ + + E +E M H +IV+L
Sbjct: 400 EGQFGDVHQGIYMSPENPAMAVAIKTC--KNCTSDSVREKFLQEALTMRQFD-HPHIVKL 456
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
G + V +IM+LC GEL + K + Q+ T + Y S +HR
Sbjct: 457 IGVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHR 515
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV-----------APEV 241
D+ N L S + +K DFGLS + + S YY APE
Sbjct: 516 DIAARNVLVS---SNDCVKLGDFGLS---------RYMEDSTYYKASKGKLPIKWMAPES 563
Query: 242 LR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299
+ R + + +D+W GV ++ +L GV PF G + I G PN +
Sbjct: 564 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER---LPMPPNCPPT 620
Query: 300 AKDIVKKMLHADPKER 315
++ K DP R
Sbjct: 621 LYSLMTKCWAYDPSRR 636
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 91.1 bits (226), Expect = 2e-20
Identities = 53/307 (17%), Positives = 101/307 (32%), Gaps = 68/307 (22%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH-HLTGHRN 129
+GRG++G Y + + + A K S + ++ E I L H N
Sbjct: 17 LLELIGRGRYGAVYKGSLDE--RPVAVKVFSFA------NRQNFINEKNIYRVPLMEHDN 68
Query: 130 IVELKGAYEDRHSVN------LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHY 183
I ++R + + L+M+ G L ++ ++ L + + Y
Sbjct: 69 IARFIVG-DERVTADGRMEYLLVMEYYPNGSLXK-YLSLHTSDWVSSCRLAHSVTRGLAY 126
Query: 184 CHSM---------GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD----- 229
H+ + HRDL N L D +DFGLS+ + +
Sbjct: 127 LHTELPRGDHYKPAISHRDLNSRNVLVK---NDGTCVISDFGLSMRLTGNRLVRPGEEDN 183
Query: 230 ----LVGSAYYVAPEVLR--------RNYGAEADIWSAGVILYILLSGV----------- 266
VG+ Y+APEVL + + D+++ G+I + +
Sbjct: 184 AAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPE 243
Query: 267 --PPFWGETEQSIFDAILRGHIDFS------SDPWPNISSSAKDIVKKML---HADPKER 315
F E ++ + + W S + + + + + D + R
Sbjct: 244 YQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEAR 303
Query: 316 LSAAEVL 322
L+A
Sbjct: 304 LTAQXAE 310
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 89.9 bits (224), Expect = 3e-20
Identities = 61/237 (25%), Positives = 93/237 (39%), Gaps = 33/237 (13%)
Query: 66 RNTYIFGRELGRGQFGVTY---LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
R + R LG G FG Y HK K A K+ +K D+ E E IM
Sbjct: 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTC--KKDCTLDNKEKFMSEAVIMK 68
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVV 181
+L H +IV+L G E +IM+L GEL + K Q+ +
Sbjct: 69 NLD-HPHIVKLIGIIE-EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAM 126
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV---- 237
Y S+ +HRD+ N L + +K DFGLS + + YY
Sbjct: 127 AYLESINCVHRDIAVRNILVA---SPECVKLGDFGLS---------RYIEDEDYYKASVT 174
Query: 238 -------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
+PE + R + +D+W V ++ +LS G PF+ + + + +G
Sbjct: 175 RLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD 231
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 90.5 bits (225), Expect = 3e-20
Identities = 51/250 (20%), Positives = 88/250 (35%), Gaps = 35/250 (14%)
Query: 55 GRVLGKPMEDVRNTYIFGRELGRGQFGV----TYLVTHKDTKQQFACKSISSRKLINRDD 110
G + + LG G FG ++ + K K I R
Sbjct: 1 GAMKVLARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVI--EDKSGRQS 58
Query: 111 VEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERA 169
+ V + + L H +IV L G S+ L+ G L D + +G +
Sbjct: 59 FQAVTDHMLAIGSLD-HAHIVRLLGLCPG-SSLQLVTQYLPLGSLLDHVRQHRGALGPQL 116
Query: 170 AANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD 229
N Q+ ++Y G++HR+L N L S ++ DFG++
Sbjct: 117 LLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLK---SPSQVQVADFGVA---------DL 164
Query: 230 LVGSAYYV------------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQ 275
L + A E + Y ++D+WS GV ++ L++ G P+ G
Sbjct: 165 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA 224
Query: 276 SIFDAILRGH 285
+ D + +G
Sbjct: 225 EVPDLLEKGE 234
|
| >1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A Length = 90 | Back alignment and structure |
|---|
Score = 84.2 bits (209), Expect = 3e-20
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNG 424
LSEE I K F D D G I+ +EL + LG ++ E+ ++E D DG+G
Sbjct: 12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSG 71
Query: 425 TIDYIEFITATMHMNRVEREE 445
TID+ EF+ M R +E+
Sbjct: 72 TIDFEEFLVM---MVRQMKED 89
|
| >1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A Length = 90 | Back alignment and structure |
|---|
Score = 74.6 bits (184), Expect = 7e-17
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---IKEIIAEVDIDNDGRIN 498
E AF+ FD D G I+ +EL ++ +G T + II EVD D G I+
Sbjct: 17 EMIAEFKAAFDMFDADGGGDISTKELGTVMR--MLGQNPTKEELDAIIEEVDEDGSGTID 74
Query: 499 YEEFAAMMRK 508
+EEF MM +
Sbjct: 75 FEEFLVMMVR 84
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 90.0 bits (224), Expect = 3e-20
Identities = 59/235 (25%), Positives = 89/235 (37%), Gaps = 29/235 (12%)
Query: 66 RNTYIFGRELGRGQFGVTY---LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
+LG G FGV A K + L + ++D REV MH
Sbjct: 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMH 76
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVV 181
L HRN++ L G + ++ +L G L DR+ +GH+ + Q+ +
Sbjct: 77 SLD-HRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGM 134
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV---- 237
Y S +HRDL N L ++ +K DFGL D Y +
Sbjct: 135 GYLESKRFIHRDLAARNLLLAT---RDLVKIGDFGLMRALPQND-------DHYVMQEHR 184
Query: 238 -------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILR 283
APE L+ R + +D W GV L+ + + G P+ G I I +
Sbjct: 185 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 239
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 89.7 bits (223), Expect = 4e-20
Identities = 40/239 (16%), Positives = 74/239 (30%), Gaps = 29/239 (12%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSIS----SRKLINRDDVEDVRREVQIM 121
IF LG+G F + ++ +R+ E +M
Sbjct: 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMM 66
Query: 122 HHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTV 180
L+ H+++V G L+ + G L + K + + +Q+
Sbjct: 67 SKLS-HKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAA 125
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPL-----KATDFGLSVFFKPGDVFKDLVGSAY 235
+H+ ++H ++ +N L + K +D G+S ++
Sbjct: 126 MHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS---------ITVLPKDI 176
Query: 236 Y------VAPEVL--RRNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
V PE + +N D WS G L+ + S G P Q H
Sbjct: 177 LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRH 235
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 92.5 bits (230), Expect = 4e-20
Identities = 56/257 (21%), Positives = 107/257 (41%), Gaps = 19/257 (7%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
R +LG GQ+G Y K A K++ + +VE+ +E +M +
Sbjct: 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK 274
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTVVHY 183
H N+V+L G +I + G L D R + S + Q+ + + Y
Sbjct: 275 -HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 333
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV---APE 240
+HR+L N L E+ +K DFGLS GD + G+ + + APE
Sbjct: 334 LEKKNFIHRNLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 389
Query: 241 VLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298
L + ++D+W+ GV+L+ + + G+ P+ G +++ + + + +
Sbjct: 390 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR---MERPEGCPE 446
Query: 299 SAKDIVKKMLHADPKER 315
++++ +P +R
Sbjct: 447 KVYELMRACWQWNPSDR 463
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 90.1 bits (224), Expect = 7e-20
Identities = 65/305 (21%), Positives = 112/305 (36%), Gaps = 48/305 (15%)
Query: 66 RNTYIFGRELGRGQFGVTYL-----VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
R R LG G FG Y + + + Q A K++ ++ + D D E I
Sbjct: 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQDELDFLMEALI 127
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTV 180
+ H+NIV G ++++L AGG+L + + ++ ++ V
Sbjct: 128 ISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 186
Query: 181 V-------HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Y +HRD+ N L + K DFG++ +D+ +
Sbjct: 187 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA---------RDIYRA 237
Query: 234 AYYV------------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFD 279
YY PE + ++ D WS GV+L+ + S G P+ ++ Q + +
Sbjct: 238 GYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 297
Query: 280 AILRGHIDFSSDPWPNISSSAKDIVKKML---HADPKERLSAAEVLNH-PWMRVDGDASD 335
+ G DP N I M P++R + A +L + D D +
Sbjct: 298 FVTSGGR---MDPPKNCPGPVYRI---MTQCWQHQPEDRPNFAIILERIEYCTQDPDVIN 351
Query: 336 KPLDI 340
L I
Sbjct: 352 TALPI 356
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 88.4 bits (220), Expect = 9e-20
Identities = 62/237 (26%), Positives = 96/237 (40%), Gaps = 33/237 (13%)
Query: 66 RNTYIFGRELGRGQFGVTY---LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
R GR +G GQFG + ++ ++ A K+ + + E +E M
Sbjct: 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTC--KNCTSDSVREKFLQEALTMR 71
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVV 181
H +IV+L G + V +IM+LC GEL + K + Q+ T +
Sbjct: 72 QFD-HPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 129
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV---- 237
Y S +HRD+ N L S + +K DFGLS + + S YY
Sbjct: 130 AYLESKRFVHRDIAARNVLVS---SNDCVKLGDFGLS---------RYMEDSTYYKASKG 177
Query: 238 -------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
APE + R + + +D+W GV ++ +L GV PF G + I G
Sbjct: 178 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 234
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 86.1 bits (214), Expect = 4e-19
Identities = 54/238 (22%), Positives = 97/238 (40%), Gaps = 40/238 (16%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
R +ELG GQFGV L K + A K I ++ +E Q M L+
Sbjct: 7 REEITLLKELGSGQFGVVKLGKWKG-QYDVAVKMIKE----GSMSEDEFFQEAQTMMKLS 61
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERA-----AANLCRQMVTV 180
H +V+ G + + ++ + + G L + + + G E + ++C M
Sbjct: 62 -HPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMA-- 118
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV--- 237
+ S +HRDL N L D +K +DFG++ + ++ Y
Sbjct: 119 --FLESHQFIHRDLAARNCLVD---RDLCVKVSDFGMT---------RYVLDDQYVSSVG 164
Query: 238 --------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
APEV Y +++D+W+ G++++ + S G P+ T + + +GH
Sbjct: 165 TKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGH 222
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 86.5 bits (215), Expect = 4e-19
Identities = 52/232 (22%), Positives = 89/232 (38%), Gaps = 30/232 (12%)
Query: 70 IFGRELGRGQFGVTY--LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH 127
+ +ELG G FG K + A K + + + +++ E +M L +
Sbjct: 20 LEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-DPALKDELLAEANVMQQLD-N 77
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM 187
IV + G E S L+M++ G L + H ++ L Q+ + Y
Sbjct: 78 PYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES 136
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV---------- 237
+HRDL N L K +DFGLS + + YY
Sbjct: 137 NFVHRDLAARNVLLV---TQHYAKISDFGLSKALRADE--------NYYKAQTHGKWPVK 185
Query: 238 --APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
APE + + +++D+WS GV+++ S G P+ G + + +G
Sbjct: 186 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE 237
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 85.7 bits (213), Expect = 5e-19
Identities = 57/236 (24%), Positives = 101/236 (42%), Gaps = 36/236 (15%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
+ F +E+G GQFG+ +L + K + A K+I ED E ++M L+
Sbjct: 7 PSELTFVQEIGSGQFGLVHLGYWLN-KDKVAIKTIRE----GAMSEEDFIEEAEVMMKLS 61
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL---CRQMVTVVH 182
H +V+L G ++ + L+ + G L D + + AA L C + +
Sbjct: 62 -HPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMA 118
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV----- 237
Y V+HRDL N L E+ +K +DFG++ + ++ Y
Sbjct: 119 YLEEACVIHRDLAARNCLVG---ENQVIKVSDFGMT---------RFVLDDQYTSSTGTK 166
Query: 238 ------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
+PEV Y +++D+WS GV+++ + S G P+ + + + I G
Sbjct: 167 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF 222
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 86.1 bits (214), Expect = 6e-19
Identities = 54/230 (23%), Positives = 95/230 (41%), Gaps = 28/230 (12%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDV--EDVRREVQIMHH 123
+ +G+G+FG L ++ K A K I ++D + E +M
Sbjct: 20 MKELKLLQTIGKGEFGDVMLGDYRGNK--VAVKCI-------KNDATAQAFLAEASVMTQ 70
Query: 124 LTGHRNIVELKGA-YEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTV 180
L H N+V+L G E++ + ++ + A G L D R + +
Sbjct: 71 LR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 129
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV--- 237
+ Y +HRDL N L S ED+ K +DFGL+ + V
Sbjct: 130 MEYLEGNNFVHRDLAARNVLVS---EDNVAKVSDFGLT-----KEASSTQDTGKLPVKWT 181
Query: 238 APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
APE LR + + ++D+WS G++L+ + S G P+ + + + +G+
Sbjct: 182 APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY 231
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 86.2 bits (214), Expect = 7e-19
Identities = 61/261 (23%), Positives = 100/261 (38%), Gaps = 51/261 (19%)
Query: 61 PMEDVRNTYIFGRELGRGQFGV----TYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR 116
P + R+LG G FG Y +T +Q A KS+ + + + D+++
Sbjct: 15 PTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSL--KPESGGNHIADLKK 72
Query: 117 EVQIMHHLTGHRNIVELKGA--YEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANL 173
E++I+ +L H NIV+ KG + + + LIM+ G L + + K + +
Sbjct: 73 EIEILRNLY-HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKY 131
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL-VG 232
Q+ + Y S +HRDL N L + +K DFGL+ K +
Sbjct: 132 AVQICKGMDYLGSRQYVHRDLAARNVLVE---SEHQVKIGDFGLT---------KAIETD 179
Query: 233 SAYYV------------APEVLR-RNYGAEADIWSAGVILYILLS--------------- 264
YY APE L + +D+WS GV L+ LL+
Sbjct: 180 KEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKM 239
Query: 265 GVPPFWGETEQSIFDAILRGH 285
P T + + + G
Sbjct: 240 IGPTHGQMTVTRLVNTLKEGK 260
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 85.7 bits (213), Expect = 8e-19
Identities = 54/234 (23%), Positives = 97/234 (41%), Gaps = 32/234 (13%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
F +ELG GQFGV + A K I ++ E ++M +L+
Sbjct: 23 PKDLTFLKELGTGQFGVVKYGKWRGQY-DVAIKMIKE----GSMSEDEFIEEAKVMMNLS 77
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYC 184
H +V+L G + + +I + A G L + + + + + +C+ + + Y
Sbjct: 78 -HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL 136
Query: 185 HSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV------- 237
S +HRDL N L + + +K +DFGLS + ++ Y
Sbjct: 137 ESKQFLHRDLAARNCLVN---DQGVVKVSDFGLS---------RYVLDDEYTSSVGSKFP 184
Query: 238 ----APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
PEVL + +++DIW+ GV+++ + S G P+ T + I +G
Sbjct: 185 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 238
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 86.2 bits (214), Expect = 9e-19
Identities = 59/243 (24%), Positives = 89/243 (36%), Gaps = 38/243 (15%)
Query: 66 RNTYIFGRELGRGQFGV----TYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIM 121
+ +LG+G FG Y +T A K + + D D +RE+QI+
Sbjct: 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQL---QHSGPDQQRDFQREIQIL 78
Query: 122 HHLTGHRNIVELKG--AYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMV 178
L IV+ +G R S+ L+M+ G L D + + Q+
Sbjct: 79 KAL-HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQIC 137
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL-VGSAYYV 237
+ Y S +HRDL N L ++ +K DFGL+ K L + YYV
Sbjct: 138 KGMEYLGSRRCVHRDLAARNILVE---SEAHVKIADFGLA---------KLLPLDKDYYV 185
Query: 238 ------------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILR 283
APE L + ++D+WS GV+LY L + E R
Sbjct: 186 VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCER 245
Query: 284 GHI 286
Sbjct: 246 DVP 248
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 86.2 bits (214), Expect = 1e-18
Identities = 56/288 (19%), Positives = 110/288 (38%), Gaps = 47/288 (16%)
Query: 66 RNTYIFGRELGRGQFGVTYL-----VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
R RELG+G FG+ Y V + + + A K++ + + + + E +
Sbjct: 24 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV--NEAASMRERIEFLNEASV 81
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTV 180
M ++V L G +IM+L G+L + + + +
Sbjct: 82 MKEF-NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 140
Query: 181 VHYCH----------SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL 230
+ + +HRDL N + + ED +K DFG++ +D+
Sbjct: 141 IQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMT---------RDI 188
Query: 231 VGSAYYV------------APEVLR-RNYGAEADIWSAGVILY-ILLSGVPPFWGETEQS 276
+ YY +PE L+ + +D+WS GV+L+ I P+ G + +
Sbjct: 189 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 248
Query: 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324
+ ++ G + D N ++++ +PK R S E+++
Sbjct: 249 VLRFVMEGGL---LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 293
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 85.9 bits (213), Expect = 1e-18
Identities = 62/298 (20%), Positives = 100/298 (33%), Gaps = 60/298 (20%)
Query: 25 PGHHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGV-- 82
HH + + ++ P + F ++LG+G FG
Sbjct: 6 HHHHHDYDIPTTENLYFQGAMGSAFEDR-------DPTQFEERHLKFLQQLGKGNFGSVE 58
Query: 83 --TYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGA--YE 138
Y +T + A K + + + + D RE++I+ L H NIV+ KG
Sbjct: 59 MCRYDPLQDNTGEVVAVKKL---QHSTEEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSA 114
Query: 139 DRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPE 197
R ++ LIM+ G L D + K Q+ + Y + +HRDL
Sbjct: 115 GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATR 174
Query: 198 NFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL-VGSAYYV------------APEVLR- 243
N L ++ +K DFGL+ K L YY APE L
Sbjct: 175 NILVE---NENRVKIGDFGLT---------KVLPQDKEYYKVKEPGESPIFWYAPESLTE 222
Query: 244 RNYGAEADIWSAGVILYILLS----------------GVPPFWGETEQSIFDAILRGH 285
+ +D+WS GV+LY L + G + + +
Sbjct: 223 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 280
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 85.9 bits (213), Expect = 1e-18
Identities = 43/244 (17%), Positives = 86/244 (35%), Gaps = 47/244 (19%)
Query: 59 GKPMED-VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
GK ++D N ++ G+++G G FG+ YL + ++ A + + + + E
Sbjct: 28 GKVLDDMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVK----VEYQENGPLFSE 83
Query: 118 VQIMHHLTGHRNIVELKGAY-------------------EDRHSVNLIMDLCAGGELFDR 158
++ + I + + ++M+ G +L
Sbjct: 84 LKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRF-MVMERL-GIDLQKI 141
Query: 159 IIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218
G + + L +M+ V+ Y H +H D+K N L D + D+GLS
Sbjct: 142 SGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQ-VYLADYGLS 200
Query: 219 VFFKPG--------DVFKDLVGSAYYVA------PEVLRRNYGAEADIWSAG-VILYILL 263
+ P + K G+ + + + RR +D+ G +L L
Sbjct: 201 YRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRR-----SDVEILGYCMLRWLC 255
Query: 264 SGVP 267
+P
Sbjct: 256 GKLP 259
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 87.0 bits (216), Expect = 1e-18
Identities = 54/234 (23%), Positives = 95/234 (40%), Gaps = 36/234 (15%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDV--EDVRREVQIMHH 123
+ +G+G+FG L ++ K A K I ++D + E +M
Sbjct: 192 MKELKLLQTIGKGEFGDVMLGDYRGNK--VAVKCI-------KNDATAQAFLAEASVMTQ 242
Query: 124 LTGHRNIVELKGA-YEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTV 180
L H N+V+L G E++ + ++ + A G L D R + +
Sbjct: 243 LR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 301
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV--- 237
+ Y +HRDL N L S ED+ K +DFGL+ K+ +
Sbjct: 302 MEYLEGNNFVHRDLAARNVLVS---EDNVAKVSDFGLT---------KEASSTQDTGKLP 349
Query: 238 ----APEVLRRN-YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
APE LR + ++D+WS G++L+ + S G P+ + + + +G+
Sbjct: 350 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY 403
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 85.0 bits (211), Expect = 2e-18
Identities = 57/257 (22%), Positives = 92/257 (35%), Gaps = 53/257 (20%)
Query: 66 RNTYIFGRELGRGQFGV----TYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIM 121
F ++LG+G FG Y +T + A K + + + + D RE++I+
Sbjct: 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL---QHSTEEHLRDFEREIEIL 65
Query: 122 HHLTGHRNIVELKGA--YEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMV 178
L H NIV+ KG R ++ LIM+ G L D + K Q+
Sbjct: 66 KSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 124
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL-VGSAYYV 237
+ Y + +HRDL N L ++ +K DFGL+ K L ++
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVE---NENRVKIGDFGLT---------KVLPQDKEFFK 172
Query: 238 ------------APEVLR-RNYGAEADIWSAGVILYILLS----------------GVPP 268
APE L + +D+WS GV+LY L + G
Sbjct: 173 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 232
Query: 269 FWGETEQSIFDAILRGH 285
+ + +
Sbjct: 233 QGQMIVFHLIELLKNNG 249
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 87.7 bits (217), Expect = 2e-18
Identities = 74/292 (25%), Positives = 113/292 (38%), Gaps = 36/292 (12%)
Query: 15 HSTTADPDTGPGHHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVR----NTYI 70
D G+ P +I P PRP TS S + + N I
Sbjct: 280 PQRRIDTLNSDGYTPEPARITSPDKPRPMPMDTSVFESPFSDPEELKDKKLFLKRDNLLI 339
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQF--ACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
ELG G FG ++ K+Q A K + ++ + D E++ RE QIMH L +
Sbjct: 340 ADIELGCGNFGSVRQGVYRMRKKQIDVAIKVL--KQGTEKADTEEMMREAQIMHQLD-NP 396
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSM 187
IV L G + ++ L+M++ GG L ++ + A L Q+ + Y
Sbjct: 397 YIVRLIGVCQ-AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK 455
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV---------- 237
+HR+L N L K +DFGLS D +YY
Sbjct: 456 NFVHRNLAARNVLLV---NRHYAKISDFGLSKALGADD--------SYYTARSAGKWPLK 504
Query: 238 --APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
APE + R + + +D+WS GV ++ LS G P+ + I +G
Sbjct: 505 WYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK 556
|
| >1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A Length = 76 | Back alignment and structure |
|---|
Score = 78.4 bits (194), Expect = 2e-18
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 442 EREEHLYKAFEYFDKD--NSGYITMEELEHALKK---YNMGDAKTIKEIIAEVDIDNDGR 496
+ E + AFE F + I+ EEL+ ++ + T+ E+I EVD + DG
Sbjct: 2 KSPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGE 61
Query: 497 INYEEFAAMMRK 508
+++EEF MM+K
Sbjct: 62 VSFEEFLVMMKK 73
|
| >1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A Length = 76 | Back alignment and structure |
|---|
Score = 62.6 bits (153), Expect = 8e-13
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRL--SESEVRQLMEAADVDGNGT 425
S EEI G E+F + + I+ EELK + LG L S + +++E D +G+G
Sbjct: 3 SPEEIKGAFEVF-AAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGE 61
Query: 426 IDYIEFIT 433
+ + EF+
Sbjct: 62 VSFEEFLV 69
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 84.6 bits (210), Expect = 3e-18
Identities = 57/241 (23%), Positives = 97/241 (40%), Gaps = 36/241 (14%)
Query: 66 RNTYIFGRELGRGQFGVTY---LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
F +GRG FG Y L+ + K A KS+ ++ + +V E IM
Sbjct: 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMK 81
Query: 123 HLTGHRNIVELKGA-YEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTV 180
+ H N++ L G S +++ G+L + I + + + Q+
Sbjct: 82 DFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 140
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV--- 237
+ Y S +HRDL N + E +K DFGL+ +D+ YY
Sbjct: 141 MKYLASKKFVHRDLAARNCMLD---EKFTVKVADFGLA---------RDMYDKEYYSVHN 188
Query: 238 -----------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRG 284
A E L+ + + ++D+WS GV+L+ L++ G PP+ I +L+G
Sbjct: 189 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 248
Query: 285 H 285
Sbjct: 249 R 249
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 83.0 bits (206), Expect = 6e-18
Identities = 49/235 (20%), Positives = 91/235 (38%), Gaps = 34/235 (14%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
R T LG GQFG ++ + + A KS+ + E +M L
Sbjct: 12 RETLKLVERLGAGQFGEVWMGYYNGH-TKVAVKSLKQ----GSMSPDAFLAEANLMKQLQ 66
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTVVHY 183
H+ +V L + + +I + G L D + + + ++ Q+ + +
Sbjct: 67 -HQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV------ 237
+HRDL+ N L S + K DFGL+ + + + Y
Sbjct: 125 IEERNYIHRDLRAANILVS---DTLSCKIADFGLA---------RLIEDNEYTAREGAKF 172
Query: 238 -----APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
APE + + ++D+WS G++L +++ G P+ G T + + RG+
Sbjct: 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY 227
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 82.7 bits (205), Expect = 1e-17
Identities = 60/230 (26%), Positives = 94/230 (40%), Gaps = 32/230 (13%)
Query: 73 RELGRGQFGVTY--LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
ELG G FG + + + A K + ++ + D E++ RE QIMH L + I
Sbjct: 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVL--KQGTEKADTEEMMREAQIMHQLD-NPYI 72
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGV 189
V L G + ++ L+M++ GG L ++ + A L Q+ + Y
Sbjct: 73 VRLIGVCQ-AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF 131
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV------------ 237
+HRDL N L K +DFGLS D +YY
Sbjct: 132 VHRDLAARNVLLV---NRHYAKISDFGLSKALGADD--------SYYTARSAGKWPLKWY 180
Query: 238 APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
APE + R + + +D+WS GV ++ LS G P+ + I +G
Sbjct: 181 APECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK 230
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 84.4 bits (209), Expect = 1e-17
Identities = 51/235 (21%), Positives = 94/235 (40%), Gaps = 34/235 (14%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
R + ++LG GQFG ++ T+ + A K++ VE E +M L
Sbjct: 187 RESLKLEKKLGAGQFGEVWMATYNKHT-KVAVKTMKP----GSMSVEAFLAEANVMKTLQ 241
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTVVHY 183
H +V+L + + +I + A G L D + + Q+ + +
Sbjct: 242 -HDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAF 299
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV------ 237
+HRDL+ N L S K DFGL+ + + + Y
Sbjct: 300 IEQRNYIHRDLRAANILVS---ASLVCKIADFGLA---------RVIEDNEYTAREGAKF 347
Query: 238 -----APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
APE + ++ ++D+WS G++L +++ G P+ G + + A+ RG+
Sbjct: 348 PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY 402
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 84.0 bits (208), Expect = 1e-17
Identities = 62/269 (23%), Positives = 106/269 (39%), Gaps = 45/269 (16%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
R + +LG+G FG ++ T T + A K++ E +E Q+M L
Sbjct: 183 RESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKP----GTMSPEAFLQEAQVMKKLR 237
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERA-----AANLCRQMVT 179
H +V+L + + ++ + + G L D + G Y AA + M
Sbjct: 238 -HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA- 294
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV-- 237
Y M +HRDL+ N L E+ K DFGL+ + + + Y
Sbjct: 295 ---YVERMNYVHRDLRAANILVG---ENLVCKVADFGLA---------RLIEDNEYTARQ 339
Query: 238 ---------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHI 286
APE + ++D+WS G++L L + G P+ G + + D + RG+
Sbjct: 340 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 399
Query: 287 DFSSDPWPNISSSAKDIVKKMLHADPKER 315
P S D++ + +P+ER
Sbjct: 400 ---MPCPPECPESLHDLMCQCWRKEPEER 425
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 82.8 bits (205), Expect = 2e-17
Identities = 53/249 (21%), Positives = 93/249 (37%), Gaps = 43/249 (17%)
Query: 66 RNTYIFGRELGRGQFGVTY---LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
+ GR LG+G+FG L + + A K + + +I D+E+ RE M
Sbjct: 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKA-DIIASSDIEEFLREAACMK 80
Query: 123 HLTGHRNIVELKGA------YEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL--- 173
H ++ +L G +I+ G+L ++A L
Sbjct: 81 EFD-HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTL 139
Query: 174 ---CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL 230
+ + Y S +HRDL N + + ED + DFGLS + +
Sbjct: 140 VRFMVDIACGMEYLSSRNFIHRDLAARNCMLA---EDMTVCVADFGLS---------RKI 187
Query: 231 VGSAYYV------------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQS 276
YY A E L Y +D+W+ GV ++ +++ G P+ G
Sbjct: 188 YSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE 247
Query: 277 IFDAILRGH 285
I++ ++ G+
Sbjct: 248 IYNYLIGGN 256
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 81.9 bits (203), Expect = 2e-17
Identities = 56/248 (22%), Positives = 98/248 (39%), Gaps = 42/248 (16%)
Query: 66 RNTYIFGRELGRGQFGVTY---LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
RN I G+ LG G+FG L T + A K++ ++ ++E+ E M
Sbjct: 33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS-SQREIEEFLSEAACMK 91
Query: 123 HLTGHRNIVELKGAYEDRHSVN-----LIMDLCAGGELFDRIIAKGHYSERAAANL---- 173
+ H N++ L G + S +I+ G+L ++ + L
Sbjct: 92 DFS-HPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLL 150
Query: 174 --CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
+ + Y + +HRDL N + +D + DFGLS K +
Sbjct: 151 KFMVDIALGMEYLSNRNFLHRDLAARNCMLR---DDMTVCVADFGLS---------KKIY 198
Query: 232 GSAYYV------------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSI 277
YY A E L R Y +++D+W+ GV ++ + + G+ P+ G +
Sbjct: 199 SGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEM 258
Query: 278 FDAILRGH 285
+D +L GH
Sbjct: 259 YDYLLHGH 266
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 82.5 bits (204), Expect = 3e-17
Identities = 59/299 (19%), Positives = 107/299 (35%), Gaps = 36/299 (12%)
Query: 8 PSSQTQLHSTTADPDTGPGHHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRN 67
S + + T + G ++ V V +
Sbjct: 30 GSPGLDGICSIEELSTSLYKKAGSENLYFQGANTVHIDLSALNPELVQAVQHVVIGPSSL 89
Query: 68 TYIFGRELGRGQFGVTY---LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHL 124
F +GRG FG Y L+ + K A KS+ ++ + +V E IM
Sbjct: 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDF 147
Query: 125 TGHRNIVELKGA-YEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVH 182
+ H N++ L G S +++ G+L + I + + + Q+ +
Sbjct: 148 S-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 206
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV----- 237
+ S +HRDL N + E +K DFGL+ +D+ +
Sbjct: 207 FLASKKFVHRDLAARNCMLD---EKFTVKVADFGLA---------RDMYDKEFDSVHNKT 254
Query: 238 ---------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
A E L+ + + ++D+WS GV+L+ L++ G PP+ I +L+G
Sbjct: 255 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 313
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 4e-17
Identities = 59/255 (23%), Positives = 94/255 (36%), Gaps = 51/255 (20%)
Query: 66 RNTYIFGRELGRGQFGV----TYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIM 121
+ R+LG G FG Y T+ T + A K++ + ++E+ I+
Sbjct: 30 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL--KADAGPQHRSGWKQEIDIL 87
Query: 122 HHLTGHRNIVELKGA--YEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVT 179
L H +I++ KG S+ L+M+ G L D + + +Q+
Sbjct: 88 RTLY-HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLP-RHSIGLAQLLLFAQQICE 145
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL-VGSAYYV- 237
+ Y H+ +HRDL N L D +K DFGL+ K + G YY
Sbjct: 146 GMAYLHAQHYIHRDLAARNVLL---DNDRLVKIGDFGLA---------KAVPEGHEYYRV 193
Query: 238 -----------APEVLR-RNYGAEADIWSAGVILYILLS---------------GVPPFW 270
APE L+ + +D+WS GV LY LL+
Sbjct: 194 REDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQG 253
Query: 271 GETEQSIFDAILRGH 285
T + + + RG
Sbjct: 254 QMTVLRLTELLERGE 268
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 4e-17
Identities = 51/238 (21%), Positives = 92/238 (38%), Gaps = 31/238 (13%)
Query: 66 RNTYIFGRELGRGQFGV----TYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIM 121
+ + +G G+FG + + A K++ + D E IM
Sbjct: 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTL--KAGYTEKQRVDFLGEAGIM 100
Query: 122 HHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTV 180
+ H NI+ L+G + +I + G L + G +S + R +
Sbjct: 101 GQFS-HHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAG 159
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV--- 237
+ Y +M +HRDL N L + + K +DFGLS + A Y
Sbjct: 160 MKYLANMNYVHRDLAARNILVN---SNLVCKVSDFGLSRVLEDDP-------EATYTTSG 209
Query: 238 --------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
APE + R + + +D+WS G++++ +++ G P+W + + AI G
Sbjct: 210 GKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGF 267
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 4e-17
Identities = 49/239 (20%), Positives = 87/239 (36%), Gaps = 34/239 (14%)
Query: 66 RNTYIFGRELGRGQFGVTY---LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
+ + +G G G L A K++ + D E IM
Sbjct: 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKAL--KAGYTERQRRDFLSEASIMG 105
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVV 181
H NI+ L+G ++ + G L + G ++ + R + +
Sbjct: 106 QFD-HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGM 164
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV---- 237
Y +G +HRDL N L + K +DFGLS + L
Sbjct: 165 RYLSDLGYVHRDLAARNVLVD---SNLVCKVSDFGLS---------RVLEDDPDAAYTTT 212
Query: 238 ---------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
APE + R + + +D+WS GV+++ +L+ G P+W T + + ++ G+
Sbjct: 213 GGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGY 271
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 83.0 bits (205), Expect = 5e-17
Identities = 56/239 (23%), Positives = 95/239 (39%), Gaps = 42/239 (17%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
R + +LG+G FG ++ T T + A K++ E +E Q+M L
Sbjct: 266 RESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKP----GTMSPEAFLQEAQVMKKLR 320
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERA-----AANLCRQMVT 179
H +V+L + + ++ + + G L D + G Y AA + M
Sbjct: 321 -HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA- 377
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV-- 237
Y M +HRDL+ N L E+ K DFGL+ + + + Y
Sbjct: 378 ---YVERMNYVHRDLRAANILVG---ENLVCKVADFGLA---------RLIEDNEYTARQ 422
Query: 238 ---------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
APE + ++D+WS G++L L + G P+ G + + D + RG+
Sbjct: 423 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 481
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 80.4 bits (199), Expect = 7e-17
Identities = 56/241 (23%), Positives = 95/241 (39%), Gaps = 36/241 (14%)
Query: 66 RNTYIFGRELGRGQFGVTY---LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
R R +G+G FGV Y + + Q A KS+ ++ VE RE +M
Sbjct: 20 RVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSL--SRITEMQQVEAFLREGLLMR 77
Query: 123 HLTGHRNIVELKGAYEDRHSVNL-IMDLCAGGELFDRIIAKGHY-SERAAANLCRQMVTV 180
L H N++ L G + ++ G+L I + + + + Q+
Sbjct: 78 GLN-HPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARG 136
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV--- 237
+ Y +HRDL N + E +K DFGL+ +D++ YY
Sbjct: 137 MEYLAEQKFVHRDLAARNCMLD---ESFTVKVADFGLA---------RDILDREYYSVQQ 184
Query: 238 -----------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRG 284
A E L+ + ++D+WS GV+L+ LL+ G PP+ + + +G
Sbjct: 185 HRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQG 244
Query: 285 H 285
Sbjct: 245 R 245
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 80.8 bits (200), Expect = 8e-17
Identities = 61/254 (24%), Positives = 103/254 (40%), Gaps = 48/254 (18%)
Query: 66 RNTYIFGRELGRGQFGVTYL-----VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
RN FG+ LG G FG + +D + A K + + + D+ E + E++I
Sbjct: 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKML--KSTAHADEKEALMSELKI 102
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFD------RIIAKGHYSERAAANL- 173
M HL H NIV L GA V +I + C G+L + R++ A +
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTAS 162
Query: 174 -------CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226
Q+ + + S +HRD+ N L + K DFGL+
Sbjct: 163 TRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT---NGHVAKIGDFGLA-------- 211
Query: 227 FKDLVGSAYYV------------APEVLR-RNYGAEADIWSAGVILY-ILLSGVPPFWG- 271
+D++ + Y+ APE + Y ++D+WS G++L+ I G+ P+ G
Sbjct: 212 -RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI 270
Query: 272 ETEQSIFDAILRGH 285
+ + G+
Sbjct: 271 LVNSKFYKLVKDGY 284
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 80.4 bits (199), Expect = 1e-16
Identities = 60/243 (24%), Positives = 98/243 (40%), Gaps = 31/243 (12%)
Query: 66 RNTYIFGRELGRGQFGVTY--LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
N F +G G FG + + A K + ++ ++DD D E++++
Sbjct: 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRM--KEYASKDDHRDFAGELEVLCK 81
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFD---RIIAKGHYSERAAANLCRQMVTV 180
L H NI+ L GA E R + L ++ G L D + A AN ++
Sbjct: 82 LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 141
Query: 181 ---VHYCH----------SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF 227
+H+ +HRDL N L E+ K DFGLS + +V+
Sbjct: 142 QQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---ENYVAKIADFGLS---RGQEVY 195
Query: 228 KDLVGSAYYV---APEVLR-RNYGAEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAIL 282
V A E L Y +D+WS GV+L+ I+ G P+ G T +++ +
Sbjct: 196 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP 255
Query: 283 RGH 285
+G+
Sbjct: 256 QGY 258
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 80.0 bits (198), Expect = 1e-16
Identities = 63/333 (18%), Positives = 118/333 (35%), Gaps = 54/333 (16%)
Query: 26 GHHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYL 85
G +G + P + S + R + ELG G FG +L
Sbjct: 1 GAMGSGSSLSPT-EGKGSGLQGHIIENPQYFSDACVHHIKRRDIVLKWELGEGAFGKVFL 59
Query: 86 -----VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140
+ + K A K++ K + +D +RE +++ L H++IV G +
Sbjct: 60 AECHNLLPEQDKMLVAVKAL---KEASESARQDFQREAELLTMLQ-HQHIVRFFGVCTEG 115
Query: 141 HSVNLIMDLCAGGEL--FDRIIAKGHYSERAAANLCRQMVTVVH-------------YCH 185
+ ++ + G+L F R ++ + + Y
Sbjct: 116 RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA 175
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV-------- 237
+ +HRDL N L + +K DFG+S +D+ + YY
Sbjct: 176 GLHFVHRDLATRNCLVG---QGLVVKIGDFGMS---------RDIYSTDYYRVGGRTMLP 223
Query: 238 ----APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSD 291
PE + R + E+D+WS GV+L+ + + G P++ + D I +G +
Sbjct: 224 IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRE---LE 280
Query: 292 PWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324
I++ +P++R S +V
Sbjct: 281 RPRACPPEVYAIMRGCWQREPQQRHSIKDVHAR 313
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 79.2 bits (196), Expect = 2e-16
Identities = 59/258 (22%), Positives = 95/258 (36%), Gaps = 52/258 (20%)
Query: 66 RNTYIFGRELGRGQFGVTYL-----VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
RN FG+ LG G FG + D A K + + + + E + E+++
Sbjct: 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKML--KPSAHLTEREALMSELKV 79
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGEL-----------FDRIIAKGHYSERA 169
+ +L H NIV L GA +I + C G+L + +
Sbjct: 80 LSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 139
Query: 170 AANLCRQMVTVVH-------YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222
A +++ + + S +HRDL N L + K DFGL+
Sbjct: 140 LALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT---HGRITKICDFGLA---- 192
Query: 223 PGDVFKDLVGSAYYV------------APEVLR-RNYGAEADIWSAGVILYILLS-GVPP 268
+D+ + YV APE + Y E+D+WS G+ L+ L S G P
Sbjct: 193 -----RDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 247
Query: 269 FWG-ETEQSIFDAILRGH 285
+ G + + I G
Sbjct: 248 YPGMPVDSKFYKMIKEGF 265
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 79.6 bits (197), Expect = 2e-16
Identities = 59/257 (22%), Positives = 101/257 (39%), Gaps = 51/257 (19%)
Query: 66 RNTYIFGRELGRGQFGVTY-------LVTHKDTKQQFACKSISSRKLINRDDVEDVRREV 118
R+ G+ LG G FG A K + + D+ D+ E+
Sbjct: 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML--KDDATEKDLSDLVSEM 91
Query: 119 QIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
++M + H+NI+ L GA + +I++ + G L + + A+ + ++ R
Sbjct: 92 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 179 TVVH----------------YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222
+ Y S +HRDL N L + E++ +K DFGL+
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLA---- 204
Query: 223 PGDVFKDLVGSAYYV------------APEVLR-RNYGAEADIWSAGVILY-ILLSGVPP 268
+D+ YY APE L R Y ++D+WS GV+++ I G P
Sbjct: 205 -----RDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 269 FWGETEQSIFDAILRGH 285
+ G + +F + GH
Sbjct: 260 YPGIPVEELFKLLKEGH 276
|
| >1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 110 | Back alignment and structure |
|---|
Score = 73.6 bits (181), Expect = 3e-16
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
++EE+ F+S+ D S I+ K K ++LS E+ + E +D D +G +
Sbjct: 16 ITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTK--SKLSIPELSYIWELSDADCDGAL 73
Query: 427 DYIEFITATMHM 438
EF A H+
Sbjct: 74 TLPEFCAA-FHL 84
|
| >1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 110 | Back alignment and structure |
|---|
Score = 61.3 bits (149), Expect = 7e-12
Identities = 17/77 (22%), Positives = 26/77 (33%), Gaps = 8/77 (10%)
Query: 442 EREEHLYKA-FEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYE 500
E + Y F D S +I+ ++ K + + I D D DG +
Sbjct: 18 EEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSKL-SIPELSYIWELSDADCDGALTLP 76
Query: 501 EFAAMM------RKGNP 511
EF A + G P
Sbjct: 77 EFCAAFHLIVARKNGYP 93
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 78.0 bits (193), Expect = 3e-16
Identities = 56/255 (21%), Positives = 100/255 (39%), Gaps = 50/255 (19%)
Query: 66 RNTYIFGRELGRGQFGVTYL-----VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
+ F ELG +FG Y + Q A K++ + E+ R E +
Sbjct: 8 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL--KDKAEGPLREEFRHEAML 65
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR----- 175
L H N+V L G +++I C+ G+L + ++ + +S+ + + R
Sbjct: 66 RARLQ-HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSA 124
Query: 176 -QMVTVVHYCH----------SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224
+ VH S V+H+DL N L + +K +D GL
Sbjct: 125 LEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVY---DKLNVKISDLGLF------ 175
Query: 225 DVFKDLVGSAYYV------------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFW 270
+++ + YY APE + + ++DIWS GV+L+ + S G+ P+
Sbjct: 176 ---REVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYC 232
Query: 271 GETEQSIFDAILRGH 285
G + Q + + I
Sbjct: 233 GYSNQDVVEMIRNRQ 247
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 78.9 bits (195), Expect = 4e-16
Identities = 59/257 (22%), Positives = 101/257 (39%), Gaps = 51/257 (19%)
Query: 66 RNTYIFGRELGRGQFGVTY-------LVTHKDTKQQFACKSISSRKLINRDDVEDVRREV 118
R+ G+ LG G FG A K + + D+ D+ E+
Sbjct: 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML--KDDATEKDLSDLVSEM 137
Query: 119 QIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
++M + H+NI+ L GA + +I++ + G L + + A+ + ++ R
Sbjct: 138 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 197
Query: 179 TVVH----------------YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222
+ Y S +HRDL N L + E++ +K DFGL+
Sbjct: 198 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLA---- 250
Query: 223 PGDVFKDLVGSAYYV------------APEVLR-RNYGAEADIWSAGVILY-ILLSGVPP 268
+D+ YY APE L R Y ++D+WS GV+++ I G P
Sbjct: 251 -----RDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 305
Query: 269 FWGETEQSIFDAILRGH 285
+ G + +F + GH
Sbjct: 306 YPGIPVEELFKLLKEGH 322
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 78.6 bits (194), Expect = 5e-16
Identities = 51/237 (21%), Positives = 91/237 (38%), Gaps = 30/237 (12%)
Query: 66 RNTYIFGRELGRGQFGVTY---LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
+ +G G+FG L + A K++ + D E IM
Sbjct: 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMG 101
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVV 181
H NI+ L+G V ++ + G L + ++ + R + + +
Sbjct: 102 QFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV---- 237
Y MG +HRDL N L + + K +DFGL + A Y
Sbjct: 161 KYLSDMGYVHRDLAARNILIN---SNLVCKVSDFGLGRVLEDDP-------EAAYTTRGG 210
Query: 238 -------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
+PE + R + + +D+WS G++L+ ++S G P+W + Q + A+ G+
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
|
| >2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} Length = 174 | Back alignment and structure |
|---|
Score = 74.6 bits (183), Expect = 6e-16
Identities = 25/149 (16%), Positives = 50/149 (33%), Gaps = 21/149 (14%)
Query: 373 MGLKEMFKSMDT---DNSGTITFEELKAGLPKLGTR------LSESEVRQLMEAADVDGN 423
MG + I +L+ L + S E R L+ ++ N
Sbjct: 1 MGSSHHHHHHSSGLVPRGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVN 60
Query: 424 GTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKK--YNMGDA-- 479
G +D EF + H F+ + G + +L A++ + G
Sbjct: 61 GRLDQEEFARLWKRLV------HYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFIS 113
Query: 480 KTIKEIIAEVDIDNDGRINYEEF-AAMMR 507
+ + ++ D+ GR+++ +MR
Sbjct: 114 RELLHLVTLRYSDSVGRVSFPSLVCFLMR 142
|
| >2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} Length = 174 | Back alignment and structure |
|---|
Score = 67.3 bits (164), Expect = 2e-13
Identities = 20/100 (20%), Positives = 38/100 (38%), Gaps = 13/100 (13%)
Query: 372 IMGLKEMFKSMDTDNSGTITFEELKAGL----PKLGTRLSESEVRQLMEAADVDGNGTID 427
++ + +F+ + + G + +L + G +S E+ L+ D G +
Sbjct: 75 LVHYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFISR-ELLHLVTLRYSDSVGRVS 132
Query: 428 YIEFITATMHMNRVEREEHLYKAFEYFDKDNSG-YITMEE 466
+ + M R E + K F KD G Y+T E
Sbjct: 133 FPSLVCFLM------RLEAMAKTFRNLSKDGKGLYLTEME 166
|
| >2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} Length = 174 | Back alignment and structure |
|---|
Score = 42.2 bits (99), Expect = 1e-04
Identities = 11/73 (15%), Positives = 29/73 (39%), Gaps = 10/73 (13%)
Query: 444 EEHLYKAFE-YFDKDNSGYITMEELEHALKKYNMGDAK-------TIKEIIAEVDIDNDG 495
H + + I +L+ L + + + ++A +++ +G
Sbjct: 4 SHHHHHHSSGLVPRG--SDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNG 61
Query: 496 RINYEEFAAMMRK 508
R++ EEFA + ++
Sbjct: 62 RLDQEEFARLWKR 74
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 78.2 bits (193), Expect = 9e-16
Identities = 62/257 (24%), Positives = 102/257 (39%), Gaps = 51/257 (19%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQF-------ACKSISSRKLINRDDVEDVRREV 118
R+ + G+ LG G FG L + A K + + D+ D+ E+
Sbjct: 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLSDLISEM 125
Query: 119 QIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
++M + H+NI+ L GA + +I++ + G L + + A+ + N
Sbjct: 126 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 185
Query: 179 TVVH----------------YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222
+ Y S +HRDL N L + ED+ +K DFGL+
Sbjct: 186 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLA---- 238
Query: 223 PGDVFKDLVGSAYYV------------APEVLR-RNYGAEADIWSAGVILY-ILLSGVPP 268
+D+ YY APE L R Y ++D+WS GV+L+ I G P
Sbjct: 239 -----RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 293
Query: 269 FWGETEQSIFDAILRGH 285
+ G + +F + GH
Sbjct: 294 YPGVPVEELFKLLKEGH 310
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 76.9 bits (190), Expect = 1e-15
Identities = 59/257 (22%), Positives = 100/257 (38%), Gaps = 51/257 (19%)
Query: 66 RNTYIFGRELGRGQFGVTYL-----VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
R+ G+ LGRG FG + T + A K + ++ + + E++I
Sbjct: 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKI 83
Query: 121 MHHLTGHRNIVELKGA-YEDRHSVNLIMDLCAGGELFD--------RIIAKGHYSERAAA 171
+ H+ H N+V L GA + + +I++ C G L + K +
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 143
Query: 172 NLC-RQMVTVVH-------YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223
L ++ + S +HRDL N L S E + +K DFGL+
Sbjct: 144 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLA----- 195
Query: 224 GDVFKDLVGSAYYV------------APEVLR-RNYGAEADIWSAGVILY-ILLSGVPPF 269
+D+ YV APE + R Y ++D+WS GV+L+ I G P+
Sbjct: 196 ----RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
Query: 270 WG-ETEQSIFDAILRGH 285
G + ++ + G
Sbjct: 252 PGVKIDEEFCRRLKEGT 268
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352 | Back alignment and structure |
|---|
Score = 77.1 bits (190), Expect = 1e-15
Identities = 44/274 (16%), Positives = 87/274 (31%), Gaps = 44/274 (16%)
Query: 27 HHPNGLKIDPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLV 86
HH + S TS + G VL + R G+ Y
Sbjct: 5 HHHSSGVDLGTENLYFQSMTTSLEALPTGTVLTDK---SGRQWKLKSFQTRDNQGILYEA 61
Query: 87 THKDT--------KQQFACK--SISSRKLINRDDVEDVRREVQI----MHHLTGHRNIVE 132
T KQ+F+ K + R ++ + + +Q+ + T I
Sbjct: 62 APTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPT 121
Query: 133 LK--GAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
G ++D++ L++ G L + K SER+ + +++ + + H
Sbjct: 122 CMGFGVHQDKYRF-LVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENE 179
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG--------DVFKDLVGSAYYVA-- 238
+H ++ EN + + +G + + P G +++
Sbjct: 180 YVHGNVTAENIFVDPEDQSQ-VTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMD 238
Query: 239 ----PEVLRRNYGAEADIWSAG-VILYILLSGVP 267
RR +D+ S G +L L +P
Sbjct: 239 LHKGCGPSRR-----SDLQSLGYCMLKWLYGFLP 267
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 76.1 bits (188), Expect = 2e-15
Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 51/256 (19%)
Query: 66 RNTYIFGRELGRGQFGVTYL-----VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
R + RELG G FG +L ++ K A K++ K +D +RE ++
Sbjct: 14 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKAL---KDPTLAARKDFQREAEL 70
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFD---------RIIAKGHYSERAAA 171
+ +L H +IV+ G D + ++ + G+L I+ G +
Sbjct: 71 LTNLQ-HEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGE 129
Query: 172 NLCRQMVTVVH-------YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224
QM+ + Y S +HRDL N L + +K DFG+S
Sbjct: 130 LGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVG---ANLLVKIGDFGMS------ 180
Query: 225 DVFKDLVGSAYYV------------APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFW 270
+D+ + YY PE + R + E+D+WS GVIL+ + + G P++
Sbjct: 181 ---RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWF 237
Query: 271 GETEQSIFDAILRGHI 286
+ + + I +G +
Sbjct: 238 QLSNTEVIECITQGRV 253
|
| >1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 95 | Back alignment and structure |
|---|
Score = 70.5 bits (173), Expect = 2e-15
Identities = 16/72 (22%), Positives = 28/72 (38%), Gaps = 3/72 (4%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
+S E E+F D D G ++ E++ K T L + + + D G +
Sbjct: 4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLK--TGLPSTLLAHIWSLCDTKDCGKL 61
Query: 427 DYIEFITATMHM 438
+F A H+
Sbjct: 62 SKDQFALA-FHL 72
|
| >1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 95 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 1e-11
Identities = 13/70 (18%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 438 MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRI 497
++ E+ + + F DKD G+++ E+ K + + + I + D + G++
Sbjct: 4 VSPAEKAK-YDEIFLKTDKDMDGFVSGLEVREIFLKTGL-PSTLLAHIWSLCDTKDCGKL 61
Query: 498 NYEEFAAMMR 507
+ ++FA
Sbjct: 62 SKDQFALAFH 71
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 75.7 bits (187), Expect = 3e-15
Identities = 62/309 (20%), Positives = 118/309 (38%), Gaps = 75/309 (24%)
Query: 66 RNTYIFGRELGRGQFGVTYL-----VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
R + G+ LG G+FG + + A K + ++ + ++ D+ E +
Sbjct: 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML--KENASPSELRDLLSEFNV 79
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGEL-----------FDRIIAKGHYSERA 169
+ + H ++++L GA + LI++ G L + + G + +
Sbjct: 80 LKQV-NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 170 AANLCRQMVTV---VHYCH----------SMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216
+ + +T+ + + M ++HRDL N L + E +K +DFG
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVA---EGRKMKISDFG 195
Query: 217 LSVFFKPGDVFKDLVGSAYYV------------APEVLR-RNYGAEADIWSAGVILY-IL 262
LS +D+ YV A E L Y ++D+WS GV+L+ I+
Sbjct: 196 LS---------RDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
Query: 263 LSGVPPFWGETEQSIFDAILRGHI----DFSSDPWPNISSSAKDIVKKML---HADPKER 315
G P+ G + +F+ + GH D S+ + ML +P +R
Sbjct: 247 TLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRL----------MLQCWKQEPDKR 296
Query: 316 LSAAEVLNH 324
A++
Sbjct: 297 PVFADISKD 305
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 75.4 bits (186), Expect = 4e-15
Identities = 61/263 (23%), Positives = 100/263 (38%), Gaps = 57/263 (21%)
Query: 66 RNTYIFGRELGRGQFGVTYL-----VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
R FG+ LG G FG ++ Q A K + ++ + + E + E+++
Sbjct: 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKML--KEKADSSEREALMSELKM 101
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGEL---------------FDRIIAKGHY 165
M L H NIV L GA + LI + C G+L + K
Sbjct: 102 MTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLE 161
Query: 166 SERAAANLC-RQMVTVVH-------YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217
E L ++ + + +HRDL N L + +K DFGL
Sbjct: 162 EEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVT---HGKVVKICDFGL 218
Query: 218 SVFFKPGDVFKDLVGSAYYV------------APEVLR-RNYGAEADIWSAGVILYILLS 264
+ +D++ + YV APE L Y ++D+WS G++L+ + S
Sbjct: 219 A---------RDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
Query: 265 -GVPPFWG-ETEQSIFDAILRGH 285
GV P+ G + + + I G
Sbjct: 270 LGVNPYPGIPVDANFYKLIQNGF 292
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364 | Back alignment and structure |
|---|
Score = 75.6 bits (186), Expect = 5e-15
Identities = 42/270 (15%), Positives = 88/270 (32%), Gaps = 48/270 (17%)
Query: 35 DPPGPPRPSSSATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQ 94
+ S+ A +VG ++ + G +G+G FG YL ++ +
Sbjct: 6 AAQAGRQSSAKRHLAEQFAVGEIITD---MAAAAWKVGLPIGQGGFGCIYLA-DMNSSES 61
Query: 95 FACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK-------------------G 135
+ K + D + E++ I +
Sbjct: 62 VGSDAPCVVK-VEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHD 120
Query: 136 AYEDRHSVNLIMDLCAG---GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
+ +IMD G ++++ +S + L +++ ++ Y H +H
Sbjct: 121 KNGKSYRF-MIMDRF-GSDLQKIYEA--NAKRFSRKTVLQLSLRILDILEYIHEHEYVHG 176
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF--------KDLVGSAYYVAPEVLRR 244
D+K N L + D + D+GL+ + P V + G+ + + +
Sbjct: 177 DIKASNLLLNYKNPDQ-VYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTS---IDA 232
Query: 245 NYGAEA----DIWSAGVILYILLSGVPPFW 270
+ G D+ G + L+G P W
Sbjct: 233 HNGVAPSRRGDLEILGYCMIQWLTGHLP-W 261
|
| >1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 Length = 92 | Back alignment and structure |
|---|
Score = 68.6 bits (168), Expect = 1e-14
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
+++E+ FK++ D +G I K K ++L E+ + E +D D +G +
Sbjct: 3 ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTK--SKLPILELSHIWELSDFDKDGAL 60
Query: 427 DYIEFITATMHM 438
EF A H+
Sbjct: 61 TLDEFCAA-FHL 71
|
| >1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 Length = 92 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 6e-12
Identities = 14/67 (20%), Positives = 24/67 (35%), Gaps = 2/67 (2%)
Query: 442 EREEHLYKA-FEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYE 500
+ + Y F+ D +G+I + K + + I D D DG + +
Sbjct: 5 DEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPIL-ELSHIWELSDFDKDGALTLD 63
Query: 501 EFAAMMR 507
EF A
Sbjct: 64 EFCAAFH 70
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 73.9 bits (182), Expect = 2e-14
Identities = 54/264 (20%), Positives = 99/264 (37%), Gaps = 58/264 (21%)
Query: 66 RNTYIFGRELGRGQFGVTYL-----VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
RN + R++G G FG + + + A K + ++ + D D +RE +
Sbjct: 46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKML--KEEASADMQADFQREAAL 103
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGEL-----------FDRIIAKGHYSERA 169
M + NIV+L G + L+ + A G+L + +
Sbjct: 104 MAEF-DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR 162
Query: 170 AANLCRQMVTVVH-------------YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216
++ ++ Y +HRDL N L E+ +K DFG
Sbjct: 163 VSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVG---ENMVVKIADFG 219
Query: 217 LSVFFKPGDVFKDLVGSAYYV------------APEVLR-RNYGAEADIWSAGVILYILL 263
LS +++ + YY PE + Y E+D+W+ GV+L+ +
Sbjct: 220 LS---------RNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 270
Query: 264 S-GVPPFWGETEQSIFDAILRGHI 286
S G+ P++G + + + G+I
Sbjct: 271 SYGLQPYYGMAHEEVIYYVRDGNI 294
|
| >2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} Length = 111 | Back alignment and structure |
|---|
Score = 67.1 bits (164), Expect = 6e-14
Identities = 17/72 (23%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
+ + + +++F S D SG +T + + L + + L ++++ + +D+D +G +
Sbjct: 8 VPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILMQ--SSLPQAQLASIWNLSDIDQDGKL 65
Query: 427 DYIEFITATMHM 438
EFI A MH+
Sbjct: 66 TAEEFILA-MHL 76
|
| >2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} Length = 111 | Back alignment and structure |
|---|
Score = 59.8 bits (145), Expect = 3e-11
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 8/80 (10%)
Query: 438 MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRI 497
+ + R + + F DK SG++T + L + ++ + I DID DG++
Sbjct: 8 VPQSSRLK-YRQLFNSHDKTMSGHLTGPQARTILMQSSL-PQAQLASIWNLSDIDQDGKL 65
Query: 498 NYEEFAAMM------RKGNP 511
EEF M G P
Sbjct: 66 TAEEFILAMHLIDVAMSGQP 85
|
| >3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A Length = 121 | Back alignment and structure |
|---|
Score = 61.8 bits (150), Expect = 6e-12
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
++ EE + F S+ SG IT ++ + + + L + + Q+ AD++ +G +
Sbjct: 27 ITVEERAKHDQQFHSLK-PISGFITGDQARNFFFQ--SGLPQPVLAQIWALADMNNDGRM 83
Query: 427 DYIEFITATMHM 438
D +EF A M +
Sbjct: 84 DQVEFSIA-MKL 94
|
| >3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A Length = 121 | Back alignment and structure |
|---|
Score = 51.8 bits (124), Expect = 2e-08
Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEE 501
E + + K SG+IT ++ + + + + +I A D++NDGR++ E
Sbjct: 29 VEERAKHDQQFHSLKPISGFITGDQARNFFFQSGL-PQPVLAQIWALADMNNDGRMDQVE 87
Query: 502 FAAMMR 507
F+ M+
Sbjct: 88 FSIAMK 93
|
| >1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1 Length = 863 | Back alignment and structure |
|---|
Score = 65.7 bits (159), Expect = 2e-11
Identities = 33/160 (20%), Positives = 70/160 (43%), Gaps = 7/160 (4%)
Query: 350 RAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSES 409
R +N+++ L A+ +S+E++ + F D +G + E+ +A L +G + E+
Sbjct: 702 RTINEVENQILTRDAKGISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEA 761
Query: 410 EVRQLMEAADVDGNGTIDYIEFITATMHMNR-VEREEHLYKAFEYFDKDNSGYITMEELE 468
E ++M D + G + + FI + + + +F+ D YIT++EL
Sbjct: 762 EFARIMSIVDPNRMGVVTFQAFIDFMSRETADTDTADQVMASFKILAGDK-NYITVDELR 820
Query: 469 HALKKYNMGDAKTIKEIIAEVDIDN--DGRINYEEFAAMM 506
L A+ +A + + G ++Y F+ +
Sbjct: 821 RELPP---DQAEYCIARMAPYNGRDAVPGALDYMSFSTAL 857
|
| >1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1 Length = 863 | Back alignment and structure |
|---|
Score = 45.7 bits (107), Expect = 3e-05
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 442 EREEHLYKAFEYFDKDNSGYITMEELEHALK--KYNMGDAKTIKEIIAEVDIDNDGRINY 499
E+ +F +FD+ +G + E+ L YNMG+A+ I++ VD + G + +
Sbjct: 722 EQMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAE-FARIMSIVDPNRMGVVTF 780
Query: 500 EEFAAMMRKGNPD 512
+ F M + D
Sbjct: 781 QAFIDFMSRETAD 793
|
| >1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 Length = 99 | Back alignment and structure |
|---|
Score = 59.4 bits (144), Expect = 2e-11
Identities = 14/73 (19%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Query: 436 MHMNRVEREEHLY-KAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDND 494
+ + ++ +Y K + + N+G + + LKK + + +I D D
Sbjct: 1 LSLTQLSSGNPVYEKYYRQVEAGNTGRVLALDAAAFLKKSGL-PDLILGKIWDLADTDGK 59
Query: 495 GRINYEEFAAMMR 507
G ++ +EF +R
Sbjct: 60 GVLSKQEFFVALR 72
|
| >1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 Length = 99 | Back alignment and structure |
|---|
Score = 56.7 bits (137), Expect = 2e-10
Identities = 14/76 (18%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
++ ++ ++ ++ N+G + + A L K + L + + ++ + AD DG
Sbjct: 1 LSLTQLSSGNPVYEKYYRQVEAGNTGRVLALDAAAFLKK--SGLPDLILGKIWDLADTDG 58
Query: 423 NGTIDYIEFITATMHM 438
G + EF A + +
Sbjct: 59 KGVLSKQEFFVA-LRL 73
|
| >1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A Length = 624 | Back alignment and structure |
|---|
Score = 64.2 bits (155), Expect = 5e-11
Identities = 19/110 (17%), Positives = 46/110 (41%), Gaps = 6/110 (5%)
Query: 366 NLSEEEIMG--LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
++ + + + + + D + + F+ELK L +L ++ + R++ D
Sbjct: 2 SMDQRQKLQHWIHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQT 61
Query: 424 GTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKK 473
+++ E T + + R E + +AFE +++E L L+
Sbjct: 62 DSLEDEEIETFYKMLTQ--RAE-IDRAFEEAAGSAE-TLSVERLVTFLQH 107
|
| >1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A Length = 624 | Back alignment and structure |
|---|
Score = 49.1 bits (116), Expect = 3e-06
Identities = 15/73 (20%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Query: 438 MNRVEREEH-LYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDG 495
M++ ++ +H ++ DK+ + +EL+ LK+ N+ D ++I E D
Sbjct: 3 MDQRQKLQHWIHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTD 62
Query: 496 RINYEEFAAMMRK 508
+ EE +
Sbjct: 63 SLEDEEIETFYKM 75
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 64.1 bits (155), Expect = 8e-11
Identities = 77/506 (15%), Positives = 163/506 (32%), Gaps = 148/506 (29%)
Query: 88 HKDT---KQQFACKSISS--RKLINRD----DVEDVRREVQIMHHLTGHRNIVELKGAYE 138
H D + Q+ K I S + DV+D+ + + L+ E+
Sbjct: 6 HMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSI-----LSKE----EIDHIIM 56
Query: 139 DRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPE- 197
+ +V+ + LF +++K + ++ V V L+
Sbjct: 57 SKDAVSGTL------RLFWTLLSKQ-------EEMVQKFVEEV------------LRINY 91
Query: 198 NFLFSSSAEDS--PLKATD---------FGLSVFFKPGDV-----FKDLVGSAYYVAPE- 240
FL S + P T + + F +V + L + + P
Sbjct: 92 KFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAK 151
Query: 241 --VLRRNYG---------AEADIWSAGVILYILLSGVPPFW---GE--TEQSIFDAI--L 282
++ G A D+ + + + + FW + +++ + + L
Sbjct: 152 NVLI---DGVLGSGKTWVA-LDVCLSYKVQCKMDFKI--FWLNLKNCNSPETVLEMLQKL 205
Query: 283 RGHIDFSSDPWPNISS-------SAKDIVKKMLHADPKER--LSAAEVLNHPWMRVDGDA 333
ID + + SS S + ++++L + P E L VL + +A
Sbjct: 206 LYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL----VLLNVQ-----NA 256
Query: 334 SD-KPLDIA----VLTRMKQ---FRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTD 385
+++ + TR KQ F + ++L + L+ +E+ L +
Sbjct: 257 KAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQ 316
Query: 386 NSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDY-----IEFITATMHM-- 438
+ E+ P+ LS ++ + DG T D + +T +
Sbjct: 317 DLP----REVLTTNPRR---LS------IIAESIRDGLATWDNWKHVNCDKLTTIIESSL 363
Query: 439 NRVEREE--HLYKAFEYFDKD-------------NSGYITMEELEHALKKYNMGDAKTIK 483
N +E E ++ F + + + + L KY++ + K K
Sbjct: 364 NVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVE-KQPK 422
Query: 484 EIIAEV-DIDNDGRINYEEFAAMMRK 508
E + I + ++ E A+ R
Sbjct: 423 ESTISIPSIYLELKVKLENEYALHRS 448
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.4 bits (122), Expect = 5e-07
Identities = 73/520 (14%), Positives = 142/520 (27%), Gaps = 139/520 (26%)
Query: 8 PSSQTQLHSTTADPDTGPGHHPNGLKIDPPGP-PRPSSSATSATSSSVGRVLGKPMEDVR 66
PS T+++ D N ++ R +P +R
Sbjct: 105 PSMMTRMYIEQRDRLY------NDNQVFAKYNVSRL-----------------QPYLKLR 141
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDT---KQQFACKSISSRKLINRDD-------VEDVRR 116
EL + ++ K A S K+ + D +++
Sbjct: 142 QAL---LELRPAK----NVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNS 194
Query: 117 EVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERA------- 169
++ L ++ HS N+ + + + R++ Y E
Sbjct: 195 PETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPY-ENCLLVLLNV 253
Query: 170 -------AANL-CRQMVT-----------VVHYCHSMGVMHRD--LKPENF-LFSS---- 203
A NL C+ ++T H H E L
Sbjct: 254 QNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDC 313
Query: 204 SAEDSPLKATD---FGLSVF---FKPG------------DVFKDLVGSAY-YVAPEVLRR 244
+D P + LS+ + G D ++ S+ + P R+
Sbjct: 314 RPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRK 373
Query: 245 NYGAEADIWSAGV-ILYILLSGVPPFWGETEQSIFDAILRGHIDFSS-DPWPN------- 295
+ + ++ I ILLS W + +S ++ +S + P
Sbjct: 374 MFDRLS-VFPPSAHIPTILLS---LIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIP 429
Query: 296 ---ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLD------IAV-LTR 345
+ K + LH + + + D LD I L
Sbjct: 430 SIYLELKVKLENEYALHRSIVDHYNIPKTF-DSD-----DLIPPYLDQYFYSHIGHHLKN 483
Query: 346 MKQFRAMNKLKKVAL-------KVIAENLSEEEIMGLK------EMFKSMDTDNSGTIT- 391
++ M + V L K+ ++ + + + +K DN
Sbjct: 484 IEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYER 543
Query: 392 -FEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIE 430
+ LPK+ L S+ L+ A + + I + E
Sbjct: 544 LVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAI-FEE 582
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900 | Back alignment and structure |
|---|
Score = 60.9 bits (147), Expect = 6e-10
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Query: 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEF 431
I + ++K +TD SGTI EL G L+ + ++ D G +D+ F
Sbjct: 803 IKKWQGIYKRFETDRSGTIGSNELPGAFEAAGFHLN-QHIYSMIIRRYSDETGNMDFDNF 861
Query: 432 ITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELE 468
I+ + + + +++AF DK+ +G I + E
Sbjct: 862 ISCLVRL------DAMFRAFRSLDKNGTGQIQVNIQE 892
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900 | Back alignment and structure |
|---|
Score = 60.9 bits (147), Expect = 7e-10
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEF 431
I +F+ D D SG+++ E++ + G +L ++ Q++ A D ID+ F
Sbjct: 606 IRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLP-CQLHQVIVARFADDELIIDFDNF 664
Query: 432 ITATMHMNRVEREEHLYKAFEYFDKDNSGYITM 464
+ + + E L+K F+ D +N+G I +
Sbjct: 665 VRCLVRL------EILFKIFKQLDPENTGTIQL 691
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900 | Back alignment and structure |
|---|
Score = 57.1 bits (137), Expect = 1e-08
Identities = 32/184 (17%), Positives = 64/184 (34%), Gaps = 21/184 (11%)
Query: 335 DKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEE 394
L +VL ++ + + I N SEEE +++F + + ++ E
Sbjct: 694 ISWLSFSVLGKLAAAIEHHHHHHMHYSNIEANESEEE-RQFRKLFVQLA-GDDMEVSATE 751
Query: 395 LKA--------GLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEH 446
L R ++ D D G + + EF ++
Sbjct: 752 LMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIK------K 805
Query: 447 LYKAFEYFDKDNSGYITMEELEHALKK--YNMGDAKTIKEIIAEVDIDNDGRINYEEF-A 503
++ F+ D SG I EL A + +++ II D G ++++ F +
Sbjct: 806 WQGIYKRFETDRSGTIGSNELPGAFEAAGFHLNQ-HIYSMIIRRYS-DETGNMDFDNFIS 863
Query: 504 AMMR 507
++R
Sbjct: 864 CLVR 867
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900 | Back alignment and structure |
|---|
Score = 49.8 bits (118), Expect = 2e-06
Identities = 35/177 (19%), Positives = 69/177 (38%), Gaps = 15/177 (8%)
Query: 340 IAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGL 399
+ + K + A + LSEEEI + S + I+ +EL+ L
Sbjct: 500 LRFFSEKKAGTQELDDQIQANLPDEKVLSEEEIDDNFKTLFSKLAGDDMEISVKELQTIL 559
Query: 400 PKLGTR--------LSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAF 451
++ ++ S R ++ D DGNG + +EF + + F
Sbjct: 560 NRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRIR------NYLTIF 613
Query: 452 EYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEF-AAMMR 507
FD D SG ++ E+ A++ + ++I D++ I+++ F ++R
Sbjct: 614 RKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFADDELIIDFDNFVRCLVR 670
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900 | Back alignment and structure |
|---|
Score = 46.7 bits (110), Expect = 2e-05
Identities = 27/144 (18%), Positives = 50/144 (34%), Gaps = 25/144 (17%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITA 434
L ++FK +D +N+GTI + S + + + +
Sbjct: 674 LFKIFKQLDPENTGTIQLDL-------------ISWLSFSVLGKLAAAIEHHHHHHMHYS 720
Query: 435 TMHMNRVEREEHLYKAFE-YFDKDNSGYITMEELEHALK---------KYNMGDAKTIKE 484
+ N E E K F D ++ EL + L K + T +
Sbjct: 721 NIEANESEEERQFRKLFVQLAGDD--MEVSATELMNILNKVVTRHPDLKTDGFGIDTCRS 778
Query: 485 IIAEVDIDNDGRINYEEFAAMMRK 508
++A +D D G++ +EEF +
Sbjct: 779 MVAVMDSDTTGKLGFEEFKYLWNN 802
|
| >3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group} Length = 179 | Back alignment and structure |
|---|
Score = 57.4 bits (138), Expect = 7e-10
Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 11/109 (10%)
Query: 376 KEMFKSMD---TDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEF- 431
+MF S+ +T +ELK +L + ++ +R + D + +G + E
Sbjct: 62 VQMFDSLARKRGIVKQVLTKDELKDFYEQLTDQGFDNRLRTFFDMVDKNADGRLTAEEVK 121
Query: 432 --ITATMHMNRVER-----EEHLYKAFEYFDKDNSGYITMEELEHALKK 473
I + N++ + +E+ E D N GYI ME+LE L +
Sbjct: 122 EIIALSASANKLSKIKERADEYTALIMEELDPTNLGYIEMEDLEALLLQ 170
|
| >3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group} Length = 179 | Back alignment and structure |
|---|
Score = 42.0 bits (98), Expect = 1e-04
Identities = 20/98 (20%), Positives = 36/98 (36%), Gaps = 9/98 (9%)
Query: 421 DGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY-NMGDA 479
+ E + + L F+ DK+ G +T EE++ + +
Sbjct: 74 IVKQVLTKDELKDFYEQLTDQGFDNRLRTFFDMVDKNADGRLTAEEVKEIIALSASANKL 133
Query: 480 KTIKE--------IIAEVDIDNDGRINYEEFAAMMRKG 509
IKE I+ E+D N G I E+ A++ +
Sbjct: 134 SKIKERADEYTALIMEELDPTNLGYIEMEDLEALLLQS 171
|
| >3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L Length = 714 | Back alignment and structure |
|---|
Score = 60.2 bits (145), Expect = 9e-10
Identities = 24/97 (24%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEF 431
I +++++ +D D SGT+ E++ L + G +L ++ Q++ A D ID+ F
Sbjct: 604 IQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLP-CQLHQVIVARFADDELIIDFDNF 662
Query: 432 ITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELE 468
+ + + E L+K F+ D +N+G I ++ +
Sbjct: 663 VRCLVRL------EILFKIFKQLDPENTGTIQLDLIS 693
|
| >3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L Length = 714 | Back alignment and structure |
|---|
Score = 51.0 bits (121), Expect = 7e-07
Identities = 25/136 (18%), Positives = 54/136 (39%), Gaps = 11/136 (8%)
Query: 377 EMFKSMDTDNSGTITFEELKAGLPK----LGTRLSESEVRQLMEAADVDGNGTIDYIEFI 432
D + S L+ L K S + +++ D DG+G + EF
Sbjct: 539 AQLAGEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFY 598
Query: 433 TATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDID 492
++++ + +Y+ D D SG + E+ AL++ + ++I D
Sbjct: 599 IL---WTKIQKYQKIYREI---DVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFAD 652
Query: 493 NDGRINYEEF-AAMMR 507
++ I+++ F ++R
Sbjct: 653 DELIIDFDNFVRCLVR 668
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 58.0 bits (140), Expect = 3e-09
Identities = 37/189 (19%), Positives = 70/189 (37%), Gaps = 22/189 (11%)
Query: 66 RNTYIFGRELGRGQFGVTYL-----VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
R+ G+ LGRG FG + T + A K + ++ + + E++I
Sbjct: 21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKI 78
Query: 121 MHHLTGHRNIVELKGAY-EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVT 179
+ H+ H N+V L GA + + +I++ C G L + +K + +
Sbjct: 79 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN----EFVPYKTKGAR 134
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSS--------AEDSPLKATDFGLSVFFKPGDVF--KD 229
+G + DLK +SS E+ L + + D +
Sbjct: 135 FRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEH 194
Query: 230 LVGSAYYVA 238
L+ ++ VA
Sbjct: 195 LICYSFQVA 203
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 48.4 bits (115), Expect = 3e-06
Identities = 44/227 (19%), Positives = 81/227 (35%), Gaps = 35/227 (15%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
E + TYL + ++ + K R +D V + +++
Sbjct: 107 EFCKFGNLSTYLRSKRNEFVPYKTKGARFR--QGKDYVGAIPVDLKRRLDSITSSQSSAS 164
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRD 193
G E++ ++ + + K + Q+ + + S +HRD
Sbjct: 165 SGFVEEKSLSDVEEEEA------PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRD 218
Query: 194 LKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV------------APEV 241
L N L S E + +K DFGL+ +D+ YV APE
Sbjct: 219 LAARNILLS---EKNVVKICDFGLA---------RDIYKDPDYVRKGDARLPLKWMAPET 266
Query: 242 LRRN-YGAEADIWSAGVILY-ILLSGVPPFWG-ETEQSIFDAILRGH 285
+ Y ++D+WS GV+L+ I G P+ G + ++ + G
Sbjct: 267 IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 313
|
| >1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A Length = 106 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 3e-08
Identities = 16/80 (20%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
+ E+ +F S+ +G ++ +++K L ++L + ++ E +D+D +G +
Sbjct: 9 VKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLN--SKLPVDILGRVWELSDIDHDGML 65
Query: 427 DYIEFITATMHMNRVEREEH 446
D EF M + E+
Sbjct: 66 DRDEFAV-AMFLVYCALEKE 84
|
| >1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A Length = 106 | Back alignment and structure |
|---|
Score = 48.3 bits (115), Expect = 3e-07
Identities = 13/66 (19%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEE 501
++ Y A +G+++ ++++ L + + + DID+DG ++ +E
Sbjct: 11 PEDKAKYDAIFDSLSPVNGFLSGDKVKPVLLNSKL-PVDILGRVWELSDIDHDGMLDRDE 69
Query: 502 FAAMMR 507
FA M
Sbjct: 70 FAVAMF 75
|
| >1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1 Length = 78 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 1e-07
Identities = 14/61 (22%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 452 EYFDKD-NSGYITMEELEHALKK---YNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507
+Y K+ + ++ EEL+ ++ + +T+ ++ E+D + DG +++EEF +++
Sbjct: 15 KYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVK 74
Query: 508 K 508
K
Sbjct: 75 K 75
|
| >1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1 Length = 78 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 6e-06
Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 369 EEEIMGLKEMFK--SMDTDNSGTITFEELKAGLPK-LGTRLSESE-VRQLMEAADVDGNG 424
++ LK +F+ + + ++ EELK + + L + L + D +G+G
Sbjct: 3 QKSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDG 62
Query: 425 TIDYIEFIT 433
+ + EF
Sbjct: 63 EVSFEEFQV 71
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336 | Back alignment and structure |
|---|
Score = 52.6 bits (125), Expect = 1e-07
Identities = 39/283 (13%), Positives = 78/283 (27%), Gaps = 65/283 (22%)
Query: 60 KPMEDVRNTYIFG--RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRD-----DVE 112
P T ++G G FG + T A K I+ + E
Sbjct: 11 VPFSHCLPTEKLQRCEKIGEGVFGEVFQTIADHTP--VAIKIIAIEGPDLVNGSHQKTFE 68
Query: 113 DVRREVQIMHHLTG--------HRNIVELKGAY--------------------------- 137
++ E+ I L+ + L +
Sbjct: 69 EILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDR 128
Query: 138 ---EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCH-SMGVMHRD 193
+ ++++ GG +++ K S A ++ Q+ + S+ HRD
Sbjct: 129 PDFFKDDQLFIVLEFEFGGIDLEQMRTK-LSSLATAKSILHQLTASLAVAEASLRFEHRD 187
Query: 194 LKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIW 253
L N L ++ L T G S + +V +Y
Sbjct: 188 LHWGNVLLKKTS-LKKLHYTLNGKSSTIPSCGL-------------QVSIIDYTLSRLER 233
Query: 254 SAGVILYILLSGVPPFWGETEQS--IFDAILRGHIDFSSDPWP 294
V+ + F G+ + I+ + + + + + P
Sbjct: 234 DGIVVFCDVSMDEDLFTGDGDYQFDIYRLMKKENNNRWGEYHP 276
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 49.1 bits (118), Expect = 2e-06
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKA--TDFGLSVFFKPGD---VFKDLVGSAYY 236
HY H+ ++HRD+K N L D TDFG+S D + + G+ Y
Sbjct: 153 HYLHTRAIIHRDVKSINILL-----DENFVPKITDFGISKKGTELDQTHLSTVVKGTLGY 207
Query: 237 VAPEVLRRNYGAE-ADIWSAGVILYILLSGVPP 268
+ PE + E +D++S GV+L+ +L
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSA 240
|
| >2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A Length = 139 | Back alignment and structure |
|---|
Score = 46.5 bits (110), Expect = 2e-06
Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Query: 441 VEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYE 500
V +++ Y Y +G IT + + K + + +I D+D DG ++ E
Sbjct: 46 VGKDKPTYDEIFYTLSPVNGKITGANAKKEMVKSKL-PNTVLGKIWKLADVDKDGLLDDE 104
Query: 501 EFAAMMR 507
EFA
Sbjct: 105 EFALANH 111
|
| >2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A Length = 139 | Back alignment and structure |
|---|
Score = 43.4 bits (102), Expect = 2e-05
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
++ E+F ++ +G IT K + K ++L + + ++ + ADVD +G +D
Sbjct: 46 VGKDKPTYDEIFYTLS-PVNGKITGANAKKEMVK--SKLPNTVLGKIWKLADVDKDGLLD 102
Query: 428 YIEFITATMHM 438
EF H+
Sbjct: 103 DEEFAL-ANHL 112
|
| >1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A Length = 96 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 6e-06
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Query: 445 EHLYKAFEYFDKDNSGYITMEELEHALKK------YNMGDAKTIKEIIAEVDIDNDGRIN 498
E + F F D GY+T E+L ++K N D + +I+ ++D DG++
Sbjct: 9 ETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVG 67
Query: 499 YEEFAAMM 506
++ F +++
Sbjct: 68 FQSFFSLI 75
|
| >1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A Length = 96 | Back alignment and structure |
|---|
Score = 40.2 bits (94), Expect = 1e-04
Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 6/70 (8%)
Query: 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPK-----LGTRLSESEVRQLMEAADVDGN 423
E + + F D G +T E+L+ + K L + V ++M+ D +
Sbjct: 5 EHAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRD 63
Query: 424 GTIDYIEFIT 433
G + + F +
Sbjct: 64 GKVGFQSFFS 73
|
| >1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7 Length = 103 | Back alignment and structure |
|---|
Score = 44.2 bits (104), Expect = 6e-06
Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 17/75 (22%)
Query: 451 FEYFDKDNSGYITMEELEHAL-----KKYNMGDAKT------------IKEIIAEVDIDN 493
F D ++ G + +ELE K Y+ + + + ++ VD +
Sbjct: 26 FILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQ 85
Query: 494 DGRINYEEFAAMMRK 508
D + EEF A ++
Sbjct: 86 DRLVTLEEFLASTQR 100
|
| >1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7 Length = 103 | Back alignment and structure |
|---|
Score = 38.4 bits (89), Expect = 6e-04
Identities = 16/99 (16%), Positives = 34/99 (34%), Gaps = 20/99 (20%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITA 434
K F D ++ G + +EL+A L E+ ++ + + +
Sbjct: 22 PKTFFILHDINSDGVLDEQELEA--------LFTKELEKVYDPKNEE------------D 61
Query: 435 TMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKK 473
M ER + D + +T+EE + ++
Sbjct: 62 DMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQR 100
|
| >1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A Length = 93 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 7e-06
Identities = 10/68 (14%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Query: 369 EEEIMGLKEMFK--SMDTDNSGTITFEELKAGLPK-LGTRLSESEVRQLMEAADVDGNGT 425
E+ + + +++ S+ N + ++LK L + + + D++ +G
Sbjct: 6 EKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGA 65
Query: 426 IDYIEFIT 433
+++ EF+
Sbjct: 66 VNFQEFLI 73
|
| >1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A Length = 93 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 5e-05
Identities = 14/74 (18%), Positives = 32/74 (43%), Gaps = 5/74 (6%)
Query: 438 MNRVERE-EHLYKAF-EYFDKD-NSGYITMEELEHALKK--YNMGDAKTIKEIIAEVDID 492
+ +E+ + + +Y N + ++L+ L+ K E+DI+
Sbjct: 2 LTELEKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDIN 61
Query: 493 NDGRINYEEFAAMM 506
DG +N++EF ++
Sbjct: 62 TDGAVNFQEFLILV 75
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 1e-05
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 16/95 (16%)
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKA--TDFGLSVFFKPGDVFKD------LVGSA 234
+ H +HRD+K N L D A +DFGL+ + + F +VG+
Sbjct: 148 FLHENHHIHRDIKSANILL-----DEAFTAKISDFGLA---RASEKFAQTVMTSRIVGTT 199
Query: 235 YYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPF 269
Y+APE LR ++DI+S GV+L +++G+P
Sbjct: 200 AYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAV 234
|
| >3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A Length = 100 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 1e-05
Identities = 12/65 (18%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
Query: 448 YKAFEYFDKDNSGYITMEELEHALKK------YNMGDAKTIKEIIAEVDIDNDGRINYEE 501
+ + I+ L+K + G+ K ++I +D ++DGRI+++E
Sbjct: 17 FYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDE 76
Query: 502 FAAMM 506
+ ++
Sbjct: 77 YWTLI 81
|
| >3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A Length = 100 | Back alignment and structure |
|---|
Score = 40.6 bits (95), Expect = 1e-04
Identities = 15/73 (20%), Positives = 29/73 (39%), Gaps = 8/73 (10%)
Query: 369 EEEIMGLKEMFK---SMDTDNSGTITFEELKAGLPK-----LGTRLSESEVRQLMEAADV 420
E+ ++ L E F S + I+ + L K L + +L++ D
Sbjct: 7 EKAVIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDA 66
Query: 421 DGNGTIDYIEFIT 433
+ +G I + E+ T
Sbjct: 67 NHDGRISFDEYWT 79
|
| >2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A Length = 113 | Back alignment and structure |
|---|
Score = 43.0 bits (101), Expect = 2e-05
Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 7/72 (9%)
Query: 369 EEEIMGLKEMFK--SMDTDNSGTITFEELKAGLPK-----LGTRLSESEVRQLMEAADVD 421
E+ + + F S + + ELK L + LG R E+ ++LM D +
Sbjct: 18 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSN 77
Query: 422 GNGTIDYIEFIT 433
+ +D+ E+
Sbjct: 78 RDNEVDFQEYCV 89
|
| >2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A Length = 113 | Back alignment and structure |
|---|
Score = 41.5 bits (97), Expect = 7e-05
Identities = 10/82 (12%), Positives = 34/82 (41%), Gaps = 10/82 (12%)
Query: 434 ATMHMNRVERE-EHLYKAFEYF--DKDNSGYITMEELEHALKK------YNMGDAKTIKE 484
+M +E+ + + F + + + + EL+ L + D ++
Sbjct: 11 GSM-ACPLEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQK 69
Query: 485 IIAEVDIDNDGRINYEEFAAMM 506
+++ +D + D ++++E+ +
Sbjct: 70 LMSNLDSNRDNEVDFQEYCVFL 91
|
| >3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} Length = 104 | Back alignment and structure |
|---|
Score = 42.6 bits (100), Expect = 2e-05
Identities = 7/58 (12%), Positives = 25/58 (43%), Gaps = 6/58 (10%)
Query: 455 DKDNSGYITMEELEHALKK------YNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMM 506
+ + + EL+ L + D +++++ +D + D ++++E+ +
Sbjct: 25 KEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFL 82
|
| >3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} Length = 104 | Back alignment and structure |
|---|
Score = 41.4 bits (97), Expect = 5e-05
Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 7/72 (9%)
Query: 369 EEEIMGLKEMFK--SMDTDNSGTITFEELKAGLPK-----LGTRLSESEVRQLMEAADVD 421
E+ + + F S + + ELK L + LG R E+ ++LM D +
Sbjct: 9 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSN 68
Query: 422 GNGTIDYIEFIT 433
+ +D+ E+
Sbjct: 69 RDNEVDFQEYCV 80
|
| >4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A* Length = 93 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 4e-05
Identities = 10/70 (14%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Query: 445 EHLYKAF-EYFDKD-NSGYITMEELEHALKK------YNMGDAKTIKEIIAEVDIDNDGR 496
+ + F +Y K+ + + EL+ L + D +++++ +D + D
Sbjct: 10 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNE 69
Query: 497 INYEEFAAMM 506
++++E+ +
Sbjct: 70 VDFQEYCVFL 79
|
| >4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A* Length = 93 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 4e-05
Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 7/72 (9%)
Query: 369 EEEIMGLKEMFK--SMDTDNSGTITFEELKAGLPK-----LGTRLSESEVRQLMEAADVD 421
E+ + + F S + + ELK L + LG R E+ ++LM D +
Sbjct: 6 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSN 65
Query: 422 GNGTIDYIEFIT 433
+ +D+ E+
Sbjct: 66 RDNEVDFQEYCV 77
|
| >2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A Length = 106 | Back alignment and structure |
|---|
Score = 41.0 bits (96), Expect = 9e-05
Identities = 10/81 (12%), Positives = 35/81 (43%), Gaps = 6/81 (7%)
Query: 432 ITATMHMNRVERE-EHLYKAF-EYFDKD-NSGYITMEELEHALKKY---NMGDAKTIKEI 485
+ A + +E E + F + ++ +++ E + + + + D ++ E
Sbjct: 8 LMAAEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEK 67
Query: 486 IAEVDIDNDGRINYEEFAAMM 506
+ +D++ D + + E+ ++
Sbjct: 68 MKSLDVNQDSELKFNEYWRLI 88
|
| >2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A Length = 95 | Back alignment and structure |
|---|
Score = 40.1 bits (94), Expect = 1e-04
Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Query: 455 DKDNSGYITMEELEHALKK------YNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMM 506
K + ++ EL+ L K N+ D I EI +D + D +++++EF +++
Sbjct: 24 RKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLV 81
|
| >2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A Length = 95 | Back alignment and structure |
|---|
Score = 39.0 bits (91), Expect = 3e-04
Identities = 15/72 (20%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 369 EEEIMGLKEMFK--SMDTDNSGTITFEELKAGL-----PKLGTRLSESEVRQLMEAADVD 421
EE + G+ +F S+ + T++ ELK L + ++ + ++ + D +
Sbjct: 8 EEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDAN 67
Query: 422 GNGTIDYIEFIT 433
+ +D+ EFI+
Sbjct: 68 QDEQVDFQEFIS 79
|
| >1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A Length = 93 | Back alignment and structure |
|---|
Score = 39.8 bits (93), Expect = 1e-04
Identities = 13/62 (20%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 452 EYFDKD-NSGYITMEELEHALKK------YNMGDAKTIKEIIAEVDIDNDGRINYEEFAA 504
+ K+ + ++ +EL+ L+ DA + +I+ E+D + DG ++++EF
Sbjct: 17 AHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVV 76
Query: 505 MM 506
++
Sbjct: 77 LV 78
|
| >1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A Length = 93 | Back alignment and structure |
|---|
Score = 38.6 bits (90), Expect = 5e-04
Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Query: 369 EEEIMGLKEMFK--SMDTDNSGTITFEELKAGLPK-----LGTRLSESEVRQLMEAADVD 421
E + L +F S + ++ +ELK L L + V ++M+ D +
Sbjct: 5 ETAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDEN 64
Query: 422 GNGTIDYIEFIT 433
G+G +D+ EF+
Sbjct: 65 GDGEVDFQEFVV 76
|
| >3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ... Length = 92 | Back alignment and structure |
|---|
Score = 39.8 bits (93), Expect = 2e-04
Identities = 13/78 (16%), Positives = 36/78 (46%), Gaps = 9/78 (11%)
Query: 438 MNRVERE-EHLYKAF-EYFDKD-NSGYITMEELEHALKK------YNMGDAKTIKEIIAE 488
M+ +E+ L F +Y ++ + + EL+ + + + + + +++
Sbjct: 1 MSELEKAVVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMET 60
Query: 489 VDIDNDGRINYEEFAAMM 506
+D + DG +++EF A +
Sbjct: 61 LDSNGDGECDFQEFMAFV 78
|
| >3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ... Length = 92 | Back alignment and structure |
|---|
Score = 38.6 bits (90), Expect = 3e-04
Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Query: 369 EEEIMGLKEMFK--SMDTDNSGTITFEELKAGLPK-----LGTRLSESEVRQLMEAADVD 421
E+ ++ L ++F S + + ELK + L + V ++ME D +
Sbjct: 5 EKAVVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSN 64
Query: 422 GNGTIDYIEFIT 433
G+G D+ EF+
Sbjct: 65 GDGECDFQEFMA 76
|
| >2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A Length = 92 | Back alignment and structure |
|---|
Score = 39.7 bits (93), Expect = 2e-04
Identities = 9/55 (16%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 455 DKDNSGYITMEELEHALKK---YNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMM 506
+ + ++ +EL+ +KK +I +++ +D ++D I+++E++ +
Sbjct: 22 REGSKLTLSRKELKELIKKELCLGEMKESSIDDLMKSLDKNSDQEIDFKEYSVFL 76
|
| >2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A Length = 92 | Back alignment and structure |
|---|
Score = 38.6 bits (90), Expect = 4e-04
Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Query: 369 EEEIMGLKEMFK--SMDTDNSGTITFEELKAGLPK--LGTRLSESEVRQLMEAADVDGNG 424
E+ + + F S + T++ +ELK + K + ES + LM++ D + +
Sbjct: 6 EKALTTMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGEMKESSIDDLMKSLDKNSDQ 65
Query: 425 TIDYIEFIT 433
ID+ E+
Sbjct: 66 EIDFKEYSV 74
|
| >1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A Length = 95 | Back alignment and structure |
|---|
Score = 39.8 bits (93), Expect = 2e-04
Identities = 12/78 (15%), Positives = 35/78 (44%), Gaps = 9/78 (11%)
Query: 438 MNRVERE-EHLYKAFEYF--DKDNSGYITMEELEHALKK------YNMGDAKTIKEIIAE 488
M +E + F + + ++ +T EL+ ++K + D + +++ +
Sbjct: 1 MTELETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKD 60
Query: 489 VDIDNDGRINYEEFAAMM 506
+D + D ++++ EF +
Sbjct: 61 LDANGDAQVDFSEFIVFV 78
|
| >1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A Length = 95 | Back alignment and structure |
|---|
Score = 38.3 bits (89), Expect = 5e-04
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 369 EEEIMGLKEMFK--SMDTDNSGTITFEELKAGLPK-----LGTRLSESEVRQLMEAADVD 421
E + + ++F S ++ T+T ELK + K L + + V +L++ D +
Sbjct: 5 ETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDAN 64
Query: 422 GNGTIDYIEFIT 433
G+ +D+ EFI
Sbjct: 65 GDAQVDFSEFIV 76
|
| >3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A Length = 101 | Back alignment and structure |
|---|
Score = 39.5 bits (92), Expect = 2e-04
Identities = 10/70 (14%), Positives = 26/70 (37%), Gaps = 8/70 (11%)
Query: 445 EHLYKAF-EYFDKD-NSGYITMEELEHALKK------YNMGDAKTIKEIIAEVDIDNDGR 496
+ F EY + + + EL+ L+K + ++ +D + D
Sbjct: 10 AAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCE 69
Query: 497 INYEEFAAMM 506
+++ E+ +
Sbjct: 70 VDFVEYVRSL 79
|
| >1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A Length = 99 | Back alignment and structure |
|---|
Score = 39.4 bits (92), Expect = 2e-04
Identities = 11/58 (18%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Query: 455 DKDNSGYITMEELEHALKK------YNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMM 506
N+ I+ E + N D + ++ ++D+D+DG+++++EF ++
Sbjct: 25 RDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLI 82
|
| >1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A Length = 99 | Back alignment and structure |
|---|
Score = 38.7 bits (90), Expect = 5e-04
Identities = 14/72 (19%), Positives = 30/72 (41%), Gaps = 7/72 (9%)
Query: 369 EEEIMGLKEMFK--SMDTDNSGTITFEELKAGLPK-----LGTRLSESEVRQLMEAADVD 421
E I L +F+ + N+ I+ E + + + ++M+ D+D
Sbjct: 9 ERCIESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLD 68
Query: 422 GNGTIDYIEFIT 433
+G +D+ EF+
Sbjct: 69 SDGQLDFQEFLN 80
|
| >1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A Length = 90 | Back alignment and structure |
|---|
Score = 38.6 bits (90), Expect = 4e-04
Identities = 18/70 (25%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 369 EEEIMGLKEMFK--SMDTDNSGTITFEELKAGLPK---LGTRLSESEVRQLMEAADVDGN 423
++ I L +F S + T++ +ELK + K +G++L ++E+ +LME D + +
Sbjct: 6 DQAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKD 65
Query: 424 GTIDYIEFIT 433
+++ E++T
Sbjct: 66 QEVNFQEYVT 75
|
| >1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A Length = 90 | Back alignment and structure |
|---|
Score = 38.2 bits (89), Expect = 6e-04
Identities = 9/60 (15%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 452 EYFDKD-NSGYITMEELEHALKK----YNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMM 506
+Y ++ + ++ +EL+ ++K + I ++ ++D + D +N++E+ +
Sbjct: 18 KYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFL 77
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 6e-04
Identities = 54/224 (24%), Positives = 82/224 (36%), Gaps = 55/224 (24%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LGRG FG Y D A K + + + + EV+++ HRN++ L+
Sbjct: 38 LGRGGFGKVYKGRLAD-GTLVAVKRLKEERTQGGEL--QFQTEVEMISMAV-HRNLLRLR 93
Query: 135 G----------AYE-------DRHSVNLIMDLCAGGELFD---RI-IAKGHYSERAAANL 173
G Y + + D R IA G +A L
Sbjct: 94 GFCMTPTERLLVYPYMANGSVASC----LRERPESQPPLDWPKRQRIALG-----SARGL 144
Query: 174 CRQMVTVVHYCH---SMGVMHRDLKPENFLFSSSAEDSPLKA--TDFGLSVFFKPGD--V 226
Y H ++HRD+K N L D +A DFGL+ D V
Sbjct: 145 A--------YLHDHCDPKIIHRDVKAANILL-----DEEFEAVVGDFGLAKLMDYKDTHV 191
Query: 227 FKDLVGSAYYVAPEVLRRNYGAE-ADIWSAGVILYILLSGVPPF 269
+ G+ ++APE L +E D++ GV+L L++G F
Sbjct: 192 TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 235
|
| >1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A* Length = 113 | Back alignment and structure |
|---|
Score = 38.7 bits (90), Expect = 6e-04
Identities = 19/84 (22%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query: 435 TMHMNRVERE-EHLYKAF-EYFDKD-NSGYITMEELEHALK-------KYNMGDAKTIKE 484
T M+++ER E + F +Y K + + E + ++ K + K I+
Sbjct: 1 TSKMSQLERNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEH 60
Query: 485 IIAEVDIDNDGRINYEEFAAMMRK 508
I+ ++D + D ++++EEF +M +
Sbjct: 61 IMEDLDTNADKQLSFEEFIMLMAR 84
|
| >1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A Length = 100 | Back alignment and structure |
|---|
Score = 38.2 bits (89), Expect = 7e-04
Identities = 7/43 (16%), Positives = 20/43 (46%)
Query: 464 MEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMM 506
E + L + + ++ + D + D +I++ EF +++
Sbjct: 36 KENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLL 78
|
| >2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio} Length = 99 | Back alignment and structure |
|---|
Score = 37.9 bits (88), Expect = 8e-04
Identities = 15/72 (20%), Positives = 29/72 (40%), Gaps = 7/72 (9%)
Query: 369 EEEIMGLKEMFK--SMDTDNSGTITFEELKAGLPK-----LGTRLSESEVRQLMEAADVD 421
E + L +F S + ++ ELK L L ++ V ++M D +
Sbjct: 6 EGAMDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSN 65
Query: 422 GNGTIDYIEFIT 433
+ +D+ EF+
Sbjct: 66 KDNEVDFNEFVV 77
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 520 | |||
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 100.0 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 100.0 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 100.0 | |
| 3pm8_A | 197 | PFCDPK2, calcium-dependent protein kinase 2; malar | 99.95 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.95 | |
| 3k21_A | 191 | PFCDPK3, calcium-dependent protein kinase 3; calci | 99.94 | |
| 2lhi_A | 176 | Calmodulin, serine/threonine-protein phosphatase c | 99.93 | |
| 2lmt_A | 148 | Calmodulin-related protein 97A; spermatogenesis, m | 99.93 | |
| 2obh_A | 143 | Centrin-2; DNA repair complex EF hand superfamily | 99.92 | |
| 3u0k_A | 440 | Rcamp; fluorescent protein, calcium binding, EF-ha | 99.92 | |
| 3khe_A | 191 | Calmodulin-like domain protein kinase isoform 3; c | 99.92 | |
| 3mse_B | 180 | Calcium-dependent protein kinase, putative; CDPKS, | 99.92 | |
| 3i5g_C | 159 | Myosin catalytic light chain LC-1, mantle muscle; | 99.91 | |
| 1exr_A | 148 | Calmodulin; high resolution, disorder, metal trans | 99.91 | |
| 2aao_A | 166 | CDPK, calcium-dependent protein kinase, isoform AK | 99.91 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.91 | |
| 3i5g_B | 153 | Myosin regulatory light chain LC-2, mantle muscle; | 99.91 | |
| 4ds7_A | 147 | Calmodulin, CAM; protein binding, metal binding, s | 99.9 | |
| 3qrx_A | 169 | Centrin; calcium-binding, EF-hand, cell division, | 99.9 | |
| 3ox6_A | 153 | Calcium-binding protein 1; EF-hand, calcium-sensor | 99.9 | |
| 3fwb_A | 161 | Cell division control protein 31; gene gating, com | 99.9 | |
| 2jnf_A | 158 | Troponin C; stretch activated muscle contraction, | 99.9 | |
| 2bl0_C | 142 | Myosin regulatory light chain; muscle protein, sli | 99.9 | |
| 1dtl_A | 161 | Cardiac troponin C; helix-turn-helix, structural p | 99.89 | |
| 1top_A | 162 | Troponin C; contractIle system protein; 1.78A {Gal | 99.89 | |
| 2f2o_A | 179 | Calmodulin fused with calmodulin-binding domain of | 99.89 | |
| 1m45_A | 148 | MLC1P, myosin light chain; protein-peptide complex | 99.89 | |
| 1wdc_C | 156 | Scallop myosin; calcium binding protein, muscle pr | 99.89 | |
| 3sjs_A | 220 | URE3-BP sequence specific DNA binding protein; EF- | 99.89 | |
| 2ovk_C | 159 | Myosin catalytic light chain LC-1, mantle muscle, | 99.88 | |
| 3j04_B | 143 | Myosin regulatory light chain 2, smooth muscle MA | 99.88 | |
| 2mys_C | 149 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 99.88 | |
| 2ccm_A | 191 | Calexcitin; EF hand, calcium, signaling protein; 1 | 99.88 | |
| 1nya_A | 176 | Calerythrin; EF-hand, metal binding protein; NMR { | 99.88 | |
| 2hpk_A | 208 | Photoprotein berovin; structural genomics, PSI, pr | 99.88 | |
| 2bl0_B | 145 | Myosin regulatory light chain; muscle protein, sli | 99.87 | |
| 1s6i_A | 188 | CDPK, calcium-dependent protein kinase SK5; EF-han | 99.87 | |
| 1w7j_B | 151 | Myosin light chain 1; motor protein, unconventiona | 99.87 | |
| 2mys_B | 166 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 99.87 | |
| 1qv0_A | 195 | Obelin, OBL; photoprotein, bioluminescence, atomic | 99.87 | |
| 1uhk_A | 191 | Aequorin 2, aequorin; EF-hand motif, complex, lumi | 99.87 | |
| 2ovk_B | 153 | RLC, myosin regulatory light chain LC-2, mantle mu | 99.87 | |
| 1wdc_B | 156 | Scallop myosin; calcium binding protein, muscle pr | 99.87 | |
| 2bec_A | 202 | Calcineurin B homologous protein 2; calcineurin-ho | 99.86 | |
| 3e3r_A | 204 | Calcyphosin, calcyphosine; human calcyphosine, EF- | 99.86 | |
| 3ll8_B | 155 | Calcineurin subunit B type 1; protein-peptide dock | 99.86 | |
| 3dtp_E | 196 | RLC, myosin regulatory light chain; muscle protein | 99.85 | |
| 2lvv_A | 226 | Flagellar calcium-binding protein TB-24; EF-hand, | 99.85 | |
| 1y1x_A | 191 | Leishmania major homolog of programmed cell death | 99.85 | |
| 2znd_A | 172 | Programmed cell death protein 6; penta-EF-hand pro | 99.85 | |
| 1q80_A | 174 | SCP, sarcoplasmic calcium-binding protein; all-alp | 99.85 | |
| 2sas_A | 185 | Sarcoplasmic calcium-binding protein; 2.40A {Branc | 99.85 | |
| 3akb_A | 166 | Putative calcium binding protein; EF-hand, metal b | 99.85 | |
| 1jfj_A | 134 | Ehcabp, calcium-binding protein; EF-hand, helix-lo | 99.85 | |
| 1ggw_A | 140 | Protein (CDC4P); light chain, cytokinesis, cell cy | 99.84 | |
| 3cs1_A | 219 | Flagellar calcium-binding protein; myristoylated, | 99.84 | |
| 3sg6_A | 450 | Gcamp2, myosin light chain kinase, green fluoresce | 99.84 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.84 | |
| 1jba_A | 204 | GCAP-2, protein (guanylate cyclase activating prot | 99.84 | |
| 2ct9_A | 208 | Calcium-binding protein P22; EF-hand, metal bindin | 99.84 | |
| 1ij5_A | 323 | Plasmodial specific LAV1-2 protein; fourty kDa cal | 99.83 | |
| 2qac_A | 146 | Myosin A tail domain interacting protein MTIP; mal | 99.83 | |
| 1alv_A | 173 | Calpain, S-camld; calcium binding, calmodulin like | 99.83 | |
| 2r2i_A | 198 | Guanylyl cyclase-activating protein 1; EF hand, GC | 99.83 | |
| 3a8r_A | 179 | Putative uncharacterized protein; EF-hand, membran | 99.82 | |
| 1s6c_A | 183 | KV4 potassium channel-interacting protein kchip1B; | 99.82 | |
| 2ehb_A | 207 | Calcineurin B-like protein 4; protein complex, Ca( | 99.82 | |
| 2hps_A | 186 | Coelenterazine-binding protein with bound coelent; | 99.82 | |
| 2zfd_A | 226 | Calcineurin B-like protein 2; calcium binding prot | 99.82 | |
| 2ggz_A | 211 | Guanylyl cyclase-activating protein 3; EF hand, gu | 99.82 | |
| 1dgu_A | 183 | Calcium-saturated CIB; helical, EF-hands, blood cl | 99.82 | |
| 2l2e_A | 190 | Calcium-binding protein NCS-1; NCS1P, myristoylate | 99.81 | |
| 1juo_A | 198 | Sorcin; calcium-binding proteins, penta-EF-hand, P | 99.81 | |
| 3dd4_A | 229 | KV channel-interacting protein 4; EF-hands protein | 99.81 | |
| 1s1e_A | 224 | KV channel interacting protein 1; kchip, calcium-b | 99.8 | |
| 1gjy_A | 167 | Sorcin, CP-22, V19; calcium binding, calcium-bindi | 99.8 | |
| 2i7a_A | 174 | Calpain 13; calcium-dependent cytoplasmic cysteine | 99.8 | |
| 1g8i_A | 190 | Frequenin, neuronal calcium sensor 1; calcium bind | 99.8 | |
| 1k94_A | 165 | Grancalcin; penta-EF-hand protein, calcium binding | 99.8 | |
| 2l4h_A | 214 | Calcium and integrin-binding protein 1; metal bind | 99.8 | |
| 1bjf_A | 193 | Neurocalcin delta; calcium-binding, myristoylation | 99.8 | |
| 2d8n_A | 207 | Recoverin; structural genomics, NPPSFA, national p | 99.79 | |
| 1fpw_A | 190 | Yeast frequenin, calcium-binding protein NCS-1; EF | 99.78 | |
| 2f33_A | 263 | Calbindin; EF-hand, Ca2+-binding, metal binding pr | 99.78 | |
| 2jul_A | 256 | Calsenilin; EF-hand, calcium, LXXLL, DNA binding p | 99.77 | |
| 2be4_A | 272 | Hypothetical protein LOC449832; DR.36843, BC083168 | 99.77 | |
| 2f33_A | 263 | Calbindin; EF-hand, Ca2+-binding, metal binding pr | 99.76 | |
| 1ij5_A | 323 | Plasmodial specific LAV1-2 protein; fourty kDa cal | 99.76 | |
| 2be4_A | 272 | Hypothetical protein LOC449832; DR.36843, BC083168 | 99.75 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.74 | |
| 3bow_A | 714 | Calpain-2 catalytic subunit; cysteine protease, in | 99.73 | |
| 3fs7_A | 109 | Parvalbumin, thymic; calcium-binding protein, EF-h | 99.7 | |
| 1bu3_A | 109 | Calcium-binding protein; 1.65A {Merluccius bilinea | 99.7 | |
| 5pal_A | 109 | Parvalbumin; calcium-binding protein; 1.54A {Triak | 99.69 | |
| 2pvb_A | 108 | Protein (parvalbumin); calcium binding protein, me | 99.69 | |
| 1rwy_A | 109 | Parvalbumin alpha; EF-hand, calcium-binding, calci | 99.68 | |
| 1djx_A | 624 | PLC-D1, phosphoinositide-specific phospholipase C, | 99.67 | |
| 1pva_A | 110 | Parvalbumin; calcium binding; 1.65A {Esox lucius} | 99.66 | |
| 1y1x_A | 191 | Leishmania major homolog of programmed cell death | 99.66 | |
| 1rro_A | 108 | RAT oncomodulin; calcium-binding protein; 1.30A {R | 99.66 | |
| 2d8n_A | 207 | Recoverin; structural genomics, NPPSFA, national p | 99.66 | |
| 2znd_A | 172 | Programmed cell death protein 6; penta-EF-hand pro | 99.65 | |
| 2i7a_A | 174 | Calpain 13; calcium-dependent cytoplasmic cysteine | 99.64 | |
| 1qxp_A | 900 | MU-like calpain; M-calpain, MU-calpain, catalytic | 99.64 | |
| 3h4s_E | 135 | KCBP interacting Ca2+-binding protein; kinesin, mo | 99.64 | |
| 1sjj_A | 863 | Actinin; 3-helix bundle, calponin homology domain, | 99.63 | |
| 1alv_A | 173 | Calpain, S-camld; calcium binding, calmodulin like | 99.59 | |
| 3sjs_A | 220 | URE3-BP sequence specific DNA binding protein; EF- | 99.58 | |
| 2kyc_A | 108 | Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p | 99.57 | |
| 2l2e_A | 190 | Calcium-binding protein NCS-1; NCS1P, myristoylate | 99.56 | |
| 1bjf_A | 193 | Neurocalcin delta; calcium-binding, myristoylation | 99.55 | |
| 1gjy_A | 167 | Sorcin, CP-22, V19; calcium binding, calcium-bindi | 99.54 | |
| 2ggz_A | 211 | Guanylyl cyclase-activating protein 3; EF hand, gu | 99.54 | |
| 1k94_A | 165 | Grancalcin; penta-EF-hand protein, calcium binding | 99.53 | |
| 2zkm_X | 799 | 1-phosphatidylinositol-4,5-bisphosphate phosphodie | 99.52 | |
| 1juo_A | 198 | Sorcin; calcium-binding proteins, penta-EF-hand, P | 99.52 | |
| 1fpw_A | 190 | Yeast frequenin, calcium-binding protein NCS-1; EF | 99.51 | |
| 1s6c_A | 183 | KV4 potassium channel-interacting protein kchip1B; | 99.49 | |
| 1qxp_A | 900 | MU-like calpain; M-calpain, MU-calpain, catalytic | 99.49 | |
| 3a4u_B | 143 | Multiple coagulation factor deficiency protein 2; | 99.48 | |
| 1eg3_A | 261 | Dystrophin; EF-hand like domain, WW domain, struct | 99.46 | |
| 1g8i_A | 190 | Frequenin, neuronal calcium sensor 1; calcium bind | 99.46 | |
| 1s1e_A | 224 | KV channel interacting protein 1; kchip, calcium-b | 99.46 | |
| 1jba_A | 204 | GCAP-2, protein (guanylate cyclase activating prot | 99.45 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.44 | |
| 1jfj_A | 134 | Ehcabp, calcium-binding protein; EF-hand, helix-lo | 99.43 | |
| 2ehb_A | 207 | Calcineurin B-like protein 4; protein complex, Ca( | 99.43 | |
| 2r2i_A | 198 | Guanylyl cyclase-activating protein 1; EF hand, GC | 99.41 | |
| 2kld_A | 123 | Polycystin-2; PC2, PKD2, calcium binding domain, E | 99.4 | |
| 2lv7_A | 100 | Calcium-binding protein 7; metal binding protein; | 99.4 | |
| 2lv7_A | 100 | Calcium-binding protein 7; metal binding protein; | 99.39 | |
| 2bl0_C | 142 | Myosin regulatory light chain; muscle protein, sli | 99.39 | |
| 2obh_A | 143 | Centrin-2; DNA repair complex EF hand superfamily | 99.38 | |
| 1nya_A | 176 | Calerythrin; EF-hand, metal binding protein; NMR { | 99.38 | |
| 3dd4_A | 229 | KV channel-interacting protein 4; EF-hands protein | 99.38 | |
| 1s6j_A | 87 | CDPK, calcium-dependent protein kinase SK5; EF-han | 99.37 | |
| 1wy9_A | 147 | Allograft inflammatory factor 1; EF-hand, calucium | 99.37 | |
| 3bow_A | 714 | Calpain-2 catalytic subunit; cysteine protease, in | 99.36 | |
| 2lmt_A | 148 | Calmodulin-related protein 97A; spermatogenesis, m | 99.36 | |
| 3e3r_A | 204 | Calcyphosin, calcyphosine; human calcyphosine, EF- | 99.36 | |
| 3fs7_A | 109 | Parvalbumin, thymic; calcium-binding protein, EF-h | 99.36 | |
| 3ohm_B | 885 | 1-phosphatidylinositol-4,5-bisphosphate phosphodi | 99.35 | |
| 3khe_A | 191 | Calmodulin-like domain protein kinase isoform 3; c | 99.35 | |
| 4drw_A | 121 | Protein S100-A10/annexin A2 chimeric protein; atyp | 99.35 | |
| 2jul_A | 256 | Calsenilin; EF-hand, calcium, LXXLL, DNA binding p | 99.34 | |
| 2jjz_A | 150 | Ionized calcium-binding adapter molecule 2; EF-han | 99.34 | |
| 5pal_A | 109 | Parvalbumin; calcium-binding protein; 1.54A {Triak | 99.34 | |
| 3sg6_A | 450 | Gcamp2, myosin light chain kinase, green fluoresce | 99.34 | |
| 4ds7_A | 147 | Calmodulin, CAM; protein binding, metal binding, s | 99.33 | |
| 2jjz_A | 150 | Ionized calcium-binding adapter molecule 2; EF-han | 99.33 | |
| 1exr_A | 148 | Calmodulin; high resolution, disorder, metal trans | 99.33 | |
| 3u0k_A | 440 | Rcamp; fluorescent protein, calcium binding, EF-ha | 99.33 | |
| 3akb_A | 166 | Putative calcium binding protein; EF-hand, metal b | 99.32 | |
| 3h4s_E | 135 | KCBP interacting Ca2+-binding protein; kinesin, mo | 99.32 | |
| 3qrx_A | 169 | Centrin; calcium-binding, EF-hand, cell division, | 99.32 | |
| 3k21_A | 191 | PFCDPK3, calcium-dependent protein kinase 3; calci | 99.31 | |
| 3fwb_A | 161 | Cell division control protein 31; gene gating, com | 99.3 | |
| 2pvb_A | 108 | Protein (parvalbumin); calcium binding protein, me | 99.3 | |
| 1dtl_A | 161 | Cardiac troponin C; helix-turn-helix, structural p | 99.3 | |
| 3mse_B | 180 | Calcium-dependent protein kinase, putative; CDPKS, | 99.3 | |
| 2sas_A | 185 | Sarcoplasmic calcium-binding protein; 2.40A {Branc | 99.3 | |
| 2lhi_A | 176 | Calmodulin, serine/threonine-protein phosphatase c | 99.3 | |
| 3nso_A | 101 | Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta | 99.3 | |
| 1rwy_A | 109 | Parvalbumin alpha; EF-hand, calcium-binding, calci | 99.3 | |
| 3pm8_A | 197 | PFCDPK2, calcium-dependent protein kinase 2; malar | 99.3 | |
| 2f2o_A | 179 | Calmodulin fused with calmodulin-binding domain of | 99.29 | |
| 2opo_A | 86 | Polcalcin CHE A 3; calcium-binding protein, dimer, | 99.29 | |
| 2jnf_A | 158 | Troponin C; stretch activated muscle contraction, | 99.29 | |
| 1bu3_A | 109 | Calcium-binding protein; 1.65A {Merluccius bilinea | 99.28 | |
| 1rro_A | 108 | RAT oncomodulin; calcium-binding protein; 1.30A {R | 99.28 | |
| 1m45_A | 148 | MLC1P, myosin light chain; protein-peptide complex | 99.28 | |
| 1s6i_A | 188 | CDPK, calcium-dependent protein kinase SK5; EF-han | 99.28 | |
| 3ox6_A | 153 | Calcium-binding protein 1; EF-hand, calcium-sensor | 99.27 | |
| 2aao_A | 166 | CDPK, calcium-dependent protein kinase, isoform AK | 99.27 | |
| 2zfd_A | 226 | Calcineurin B-like protein 2; calcium binding prot | 99.27 | |
| 1pva_A | 110 | Parvalbumin; calcium binding; 1.65A {Esox lucius} | 99.27 | |
| 3ll8_B | 155 | Calcineurin subunit B type 1; protein-peptide dock | 99.27 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.27 | |
| 2kn2_A | 92 | Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco | 99.26 | |
| 2ccm_A | 191 | Calexcitin; EF hand, calcium, signaling protein; 1 | 99.26 | |
| 1top_A | 162 | Troponin C; contractIle system protein; 1.78A {Gal | 99.26 | |
| 1tiz_A | 67 | Calmodulin-related protein, putative; helix-turn-h | 99.25 | |
| 2kz2_A | 94 | Calmodulin, CAM; TR2C, metal binding protein; NMR | 99.25 | |
| 2bl0_B | 145 | Myosin regulatory light chain; muscle protein, sli | 99.25 | |
| 3n22_A | 98 | Protein S100-A2; EF-hand, calcium-binding, zinc-bi | 99.25 | |
| 3a4u_B | 143 | Multiple coagulation factor deficiency protein 2; | 99.25 | |
| 1wdc_C | 156 | Scallop myosin; calcium binding protein, muscle pr | 99.24 | |
| 1avs_A | 90 | Troponin C; muscle contraction, calcium-activated, | 99.23 | |
| 2mys_C | 149 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 99.22 | |
| 2bec_A | 202 | Calcineurin B homologous protein 2; calcineurin-ho | 99.22 | |
| 2lnk_A | 113 | Protein S100-A4; EF-hand, calcium binding, all alp | 99.22 | |
| 1avs_A | 90 | Troponin C; muscle contraction, calcium-activated, | 99.21 | |
| 2b1u_A | 71 | Calmodulin-like protein 5; CLSP, calmodulin-like S | 99.21 | |
| 2ktg_A | 85 | Calmodulin, putative; ehcam, Ca-binding protein, p | 99.21 | |
| 3zwh_A | 104 | Protein S100-A4; Ca-binding protein-motor protein | 99.21 | |
| 2joj_A | 77 | Centrin protein; N-terminal domain, centrin soluti | 99.2 | |
| 2ktg_A | 85 | Calmodulin, putative; ehcam, Ca-binding protein, p | 99.2 | |
| 4eto_A | 93 | Protein S100-A4; calcium-binding protein, EF-hand, | 99.2 | |
| 2joj_A | 77 | Centrin protein; N-terminal domain, centrin soluti | 99.2 | |
| 2hpk_A | 208 | Photoprotein berovin; structural genomics, PSI, pr | 99.2 | |
| 1w7j_B | 151 | Myosin light chain 1; motor protein, unconventiona | 99.2 | |
| 2opo_A | 86 | Polcalcin CHE A 3; calcium-binding protein, dimer, | 99.19 | |
| 1uhk_A | 191 | Aequorin 2, aequorin; EF-hand motif, complex, lumi | 99.19 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 99.18 | |
| 1wlz_A | 105 | DJBP, CAP-binding protein complex interacting prot | 99.18 | |
| 3qr0_A | 816 | Phospholipase C-beta (PLC-beta); PH domain, EF han | 99.18 | |
| 1fi6_A | 92 | EH domain protein REPS1; EPS15 homology domain, EF | 99.18 | |
| 2kn2_A | 92 | Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco | 99.17 | |
| 1qv0_A | 195 | Obelin, OBL; photoprotein, bioluminescence, atomic | 99.17 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 99.17 | |
| 2y5i_A | 99 | S100Z, S100 calcium binding protein Z; metal-bindi | 99.17 | |
| 1k9u_A | 78 | Polcalcin PHL P 7; pollen allergen, calcium-bindin | 99.17 | |
| 3nso_A | 101 | Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta | 99.16 | |
| 1fi6_A | 92 | EH domain protein REPS1; EPS15 homology domain, EF | 99.16 | |
| 3li6_A | 66 | Calcium-binding protein; calcium signaling protein | 99.16 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 99.16 | |
| 1c7v_A | 81 | CAVP, calcium vector protein; EF-hand family, calc | 99.16 | |
| 3rm1_A | 92 | Protein S100-B; alpha-helical, EF hand, metal bind | 99.16 | |
| 1c07_A | 95 | Protein (epidermal growth factor receptor pathway | 99.15 | |
| 2ovk_C | 159 | Myosin catalytic light chain LC-1, mantle muscle, | 99.15 | |
| 2pmy_A | 91 | RAS and EF-hand domain-containing protein; rasef, | 99.15 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 99.15 | |
| 1j55_A | 95 | S-100P protein; metal binding protein; 2.00A {Homo | 99.15 | |
| 3i5g_C | 159 | Myosin catalytic light chain LC-1, mantle muscle; | 99.15 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 99.14 | |
| 1dgu_A | 183 | Calcium-saturated CIB; helical, EF-hands, blood cl | 99.14 | |
| 4drw_A | 121 | Protein S100-A10/annexin A2 chimeric protein; atyp | 99.14 | |
| 1c07_A | 95 | Protein (epidermal growth factor receptor pathway | 99.13 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 99.13 | |
| 2wcb_A | 95 | Protein S100-A12; calcium signalling, HOST-parasit | 99.13 | |
| 1j7q_A | 86 | CAVP, calcium vector protein; EF-hand family, calc | 99.12 | |
| 1qjt_A | 99 | EH1, epidermal growth factor receptor substrate su | 99.12 | |
| 2b1u_A | 71 | Calmodulin-like protein 5; CLSP, calmodulin-like S | 99.12 | |
| 2pmy_A | 91 | RAS and EF-hand domain-containing protein; rasef, | 99.12 | |
| 1xk4_C | 113 | Calgranulin B; S100 family, heterotetramer, metal | 99.12 | |
| 3n22_A | 98 | Protein S100-A2; EF-hand, calcium-binding, zinc-bi | 99.12 | |
| 1tiz_A | 67 | Calmodulin-related protein, putative; helix-turn-h | 99.12 | |
| 2kyc_A | 108 | Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p | 99.11 | |
| 2lnk_A | 113 | Protein S100-A4; EF-hand, calcium binding, all alp | 99.11 | |
| 1ggw_A | 140 | Protein (CDC4P); light chain, cytokinesis, cell cy | 99.11 | |
| 2kgr_A | 111 | Intersectin-1; structure, alternative splicing, ca | 99.11 | |
| 3nxa_A | 100 | Protein S100-A16; S100 family, calcium binding pro | 99.11 | |
| 2h2k_A | 106 | Protein S100-A13; calcium binding protein, metal b | 99.11 | |
| 2ct9_A | 208 | Calcium-binding protein P22; EF-hand, metal bindin | 99.11 | |
| 3cs1_A | 219 | Flagellar calcium-binding protein; myristoylated, | 99.11 | |
| 2l4h_A | 214 | Calcium and integrin-binding protein 1; metal bind | 99.1 | |
| 2d58_A | 107 | Allograft inflammatory factor 1; EF-hand, metal bi | 99.09 | |
| 2lvv_A | 226 | Flagellar calcium-binding protein TB-24; EF-hand, | 99.09 | |
| 2kgr_A | 111 | Intersectin-1; structure, alternative splicing, ca | 99.09 | |
| 1q80_A | 174 | SCP, sarcoplasmic calcium-binding protein; all-alp | 99.08 | |
| 2kax_A | 92 | Protein S100-A5; EF-hand, calcium binding protien, | 99.08 | |
| 1wdc_B | 156 | Scallop myosin; calcium binding protein, muscle pr | 99.08 |
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-78 Score=627.65 Aligned_cols=446 Identities=39% Similarity=0.653 Sum_probs=399.2
Q ss_pred cccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 010013 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (520)
Q Consensus 61 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~ 140 (520)
....+.++|.+.+.||+|+||.||+|.++.+++.||||++...........+.+.+|+.+++++. ||||+++++++.+.
T Consensus 20 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~ 98 (484)
T 3nyv_A 20 STAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKLYEFFEDK 98 (484)
T ss_dssp CCCCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCC-CTTBCCEEEEEECS
T ss_pred CCCcccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCC-CCCCCcEEEEEEeC
Confidence 34456788999999999999999999999999999999997665544556788999999999998 99999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccc
Q 010013 141 HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (520)
Q Consensus 141 ~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 220 (520)
+.+++||||+.|++|.+.+...+.+++..+..++.||+.||.|||++||+||||||+|||++....++.+||+|||++..
T Consensus 99 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 178 (484)
T 3nyv_A 99 GYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 178 (484)
T ss_dssp SEEEEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHH
T ss_pred CEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEE
Confidence 99999999999999999999988999999999999999999999999999999999999997656678899999999988
Q ss_pred cCCCCcccccccCCCccCchhhcccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHH
Q 010013 221 FKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300 (520)
Q Consensus 221 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (520)
...........||+.|+|||++.+.++.++|||||||++|+|++|.+||.+....+....+..+...+..+.|..+++.+
T Consensus 179 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 258 (484)
T 3nyv_A 179 FEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESA 258 (484)
T ss_dssp BCCCCSHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHHH
T ss_pred cccccccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHHH
Confidence 77666666678999999999998889999999999999999999999999999999999999998888777788999999
Q ss_pred HHHHHHhcccCCCCCCCHHHHHcCCccccCCCC---CCCcccHHHHHHHHHHHhhhHHHHHHHHHHHhhh-hHHHHhhHH
Q 010013 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVDGDA---SDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENL-SEEEIMGLK 376 (520)
Q Consensus 301 ~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~-~~~~~~~l~ 376 (520)
++||.+||+.||++|||+.++|+||||+..... ...+.....+.++++|...+.+++.++..++..+ ++++++++.
T Consensus 259 ~~li~~~L~~dp~~R~s~~e~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~qa~l~~i~~~~~~~~~~~~l~ 338 (484)
T 3nyv_A 259 KDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELT 338 (484)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHTSHHHHHHTC-----CCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCChhHCcCHHHHhhChhhcccccccccccccchHHHHHHHHHHhhhhHHHHHHHHHHHhccCcHHHHHHHH
Confidence 999999999999999999999999999864331 2334456678889999999999999999998775 889999999
Q ss_pred HHhcccCCCCCCcccHHHH----hhhhhhcCCCCC-------HHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHH
Q 010013 377 EMFKSMDTDNSGTITFEEL----KAGLPKLGTRLS-------ESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREE 445 (520)
Q Consensus 377 ~~F~~~D~~~~g~i~~~e~----~~~l~~~~~~~~-------~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~ 445 (520)
++|+.+|.|+||.|+.+|| ..++..+|..++ +++++.+|..+|.|++|.|+|+||+.++.........+
T Consensus 339 ~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~ 418 (484)
T 3nyv_A 339 AIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRE 418 (484)
T ss_dssp HHHHHHCTTCSSEEEHHHHHHHHHHHHC----CGGGCSHHHHHHHHHHHHHHHTCCTTSEEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCcCCCceEeHHHHHHHHHHHhhhcccccccccccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHHhccccCcHH
Confidence 9999999999999999999 445555677777 78899999999999999999999999877665566778
Q ss_pred HHHHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 446 HLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 446 ~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.++.+|+.||.|+||+|+.+||+.++... ..++++++++|..+|.|+||.|+|+||+++|.+
T Consensus 419 ~~~~~F~~~D~d~dG~I~~~El~~~l~~~-~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~ 480 (484)
T 3nyv_A 419 RLERAFRMFDSDNSGKISSTELATIFGVS-DVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLK 480 (484)
T ss_dssp HHHHHHHHHCTTCCSEEEHHHHHHHHHHT-TCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCCHHHHHHHHHhc-CCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHh
Confidence 89999999999999999999999999872 237789999999999999999999999999986
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-78 Score=629.40 Aligned_cols=450 Identities=35% Similarity=0.612 Sum_probs=398.0
Q ss_pred ccCCcccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCc----------ccHHHHHHHHHHHHhccC
Q 010013 57 VLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR----------DDVEDVRREVQIMHHLTG 126 (520)
Q Consensus 57 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~----------~~~~~~~~e~~~l~~l~~ 126 (520)
........+.++|.+++.||+|+||+||+|.++.+++.+|+|++........ ...+.+.+|+.+++++.
T Consensus 26 ~~~~~~~~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~- 104 (504)
T 3q5i_A 26 YVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLD- 104 (504)
T ss_dssp GCCEECSCGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCC-
T ss_pred eeeccCCCcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCC-
Confidence 3334445677899999999999999999999999999999999976543211 34577899999999998
Q ss_pred CCCeeEEEEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCC
Q 010013 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAE 206 (520)
Q Consensus 127 hp~iv~l~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~ 206 (520)
||||+++++++.+...+++|||||+||+|.+.+...+.+++..+..++.||+.||.|||++||+||||||+|||++..+.
T Consensus 105 hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~ 184 (504)
T 3q5i_A 105 HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNS 184 (504)
T ss_dssp CTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTC
T ss_pred CCCCCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCC
Confidence 99999999999999999999999999999999998889999999999999999999999999999999999999976554
Q ss_pred CCCeeEeecccccccCCCCcccccccCCCccCchhhcccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC
Q 010013 207 DSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI 286 (520)
Q Consensus 207 ~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~ 286 (520)
...+||+|||++.............||+.|+|||++.+.++.++|||||||++|+|++|..||.+....+....+..+..
T Consensus 185 ~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~ 264 (504)
T 3q5i_A 185 LLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKY 264 (504)
T ss_dssp CSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC
T ss_pred CccEEEEECCCCEEcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC
Confidence 55799999999998776666667789999999999988899999999999999999999999999999999999999888
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCCCCCC---cccHHHHHHHHHHHhhhHHHHHHHHHH
Q 010013 287 DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDK---PLDIAVLTRMKQFRAMNKLKKVALKVI 363 (520)
Q Consensus 287 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~i 363 (520)
.++...|..+++.+.+||.+||..||.+|||+.|+|+||||+........ ......+.++++|...+++++.++.++
T Consensus 265 ~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~a~l~~i 344 (504)
T 3q5i_A 265 YFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAAILFI 344 (504)
T ss_dssp CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTCCCCCGGGHHHHHHHHHHHHHCCCCSHHHHHHHHHH
T ss_pred CCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhchhcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 77766678899999999999999999999999999999999876544322 223456778889999999999999999
Q ss_pred Hhhh-hHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhc--------CCCCCHHHHHHHHHHhcCCCCCceehhhhHHH
Q 010013 364 AENL-SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL--------GTRLSESEVRQLMEAADVDGNGTIDYIEFITA 434 (520)
Q Consensus 364 ~~~~-~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~--------~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~ 434 (520)
...+ ++++++++.++|+.+|.|+||.|+.+||..++..+ +...+.++++.+|..+|.|++|.|+|+||+.+
T Consensus 345 ~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~ 424 (504)
T 3q5i_A 345 GSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISV 424 (504)
T ss_dssp HHHTSCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHC--CCSCCCHHHHHHHHHHHHCTTCSSSEEHHHHHHH
T ss_pred hccCCcHHHHHHHHHHHHeeCCCCCCeEcHHHHHHHHHHhhhcccccccccccHHHHHHHHHHhCCCCCCcEeHHHHHHH
Confidence 8776 89999999999999999999999999999999887 55678899999999999999999999999998
Q ss_pred hhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 435 TMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 435 ~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
+.........+.++.+|+.||.|+||+|+.+||+.++...+ .++++++++|..+|.|+||.|+|+||+.+|.+
T Consensus 425 ~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~-~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~ 497 (504)
T 3q5i_A 425 CMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGLTS-ISEKTWNDVLGEADQNKDNMIDFDEFVSMMHK 497 (504)
T ss_dssp HSCHHHHTCHHHHHHHHHHHCTTCCSEECHHHHHHHTTCSC-CCHHHHHHHHHTTCSSCSSSEEHHHHHHHHHH
T ss_pred HHhhhcccCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhhCC-CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 87655556678899999999999999999999999987633 27789999999999999999999999999986
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-78 Score=628.09 Aligned_cols=450 Identities=37% Similarity=0.643 Sum_probs=394.8
Q ss_pred cccCCcccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEE
Q 010013 56 RVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKG 135 (520)
Q Consensus 56 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~ 135 (520)
.+.......+.++|.+++.||+|+||+||+|.++.++..+|+|++.+... .......+.+|+.+++.+. ||||+++++
T Consensus 26 ~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~-hpniv~~~~ 103 (494)
T 3lij_A 26 MFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSV-STSSNSKLLEEVAVLKLLD-HPNIMKLYD 103 (494)
T ss_dssp GGCCCCBCCHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC------CTTHHHHHHHHHHTTCC-CTTBCCEEE
T ss_pred heeecCCCchhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEecccc-CchHHHHHHHHHHHHHhCC-CCCCCeEEE
Confidence 33444455677889999999999999999999999999999999976443 2233577899999999998 999999999
Q ss_pred EEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeec
Q 010013 136 AYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDF 215 (520)
Q Consensus 136 ~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Df 215 (520)
++.+...+|+|||||+||+|.+.+.....+++..+..++.||+.||.|||++||+||||||+|||++..+.+..+||+||
T Consensus 104 ~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Df 183 (494)
T 3lij_A 104 FFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDF 183 (494)
T ss_dssp EEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCC
T ss_pred EEEeCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEEC
Confidence 99999999999999999999999998889999999999999999999999999999999999999976666778999999
Q ss_pred ccccccCCCCcccccccCCCccCchhhcccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCC
Q 010013 216 GLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295 (520)
Q Consensus 216 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (520)
|++.............||+.|+|||++.+.++.++|||||||++|+|++|..||.+....+....+..+...+....|..
T Consensus 184 G~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 263 (494)
T 3lij_A 184 GLSAVFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKN 263 (494)
T ss_dssp TTCEECBTTBCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTT
T ss_pred CCCeECCCCccccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhccc
Confidence 99988776666667789999999999988899999999999999999999999999999999999999988888877889
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCC----CCCCcccHHHHHHHHHHHhhhHHHHHHHHHHHhhh-hHH
Q 010013 296 ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD----ASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENL-SEE 370 (520)
Q Consensus 296 ~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~-~~~ 370 (520)
+++.+.+||.+||+.||++|||+.++|+||||+.... ....+.....+.++++|+..+++++.++..++..+ +++
T Consensus 264 ~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~qa~l~~ia~~~~~~~ 343 (494)
T 3lij_A 264 VSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQAALLYMASKLTSQE 343 (494)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHHHHHHHC---CCCCSSHHHHHHTTTTCCHHHHHHHHHHHHHSCCHH
T ss_pred CCHHHHHHHHHHCCCChhhCccHHHHhcCcccccCcccccccccccccHHHHHHHHHHHHhHHHHHHHHHHHHHhcccHH
Confidence 9999999999999999999999999999999975311 11222334467889999999999999999998876 899
Q ss_pred HHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCC--------CCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhh
Q 010013 371 EIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGT--------RLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVE 442 (520)
Q Consensus 371 ~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~--------~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~ 442 (520)
+++++.++|+.+|.|+||.|+.+||..++..++. ..+.++++.+|..+|.|++|.|+|+||+.++.......
T Consensus 344 ~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~G~I~~~EF~~~~~~~~~~~ 423 (494)
T 3lij_A 344 ETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLL 423 (494)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHHT
T ss_pred HHHHHHHHHHHhCcCCCCeEcHHHHHHHHHHhcccccccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhhccc
Confidence 9999999999999999999999999999998864 44578899999999999999999999999887665556
Q ss_pred hHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 443 REEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 443 ~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..+.++.+|+.||+|+||+|+.+||+.++... ..++++++++|..+|.|+||.|+|+||+.+|++
T Consensus 424 ~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~-~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~ 488 (494)
T 3lij_A 424 SKDKLESAFQKFDQDGNGKISVDELASVFGLD-HLESKTWKEMISGIDSNNDGDVDFEEFCKMIQK 488 (494)
T ss_dssp CHHHHHHHHHHHCTTCSSEECHHHHHHHC-CC-SCCCHHHHHHHHTTCSSSSSSEEHHHHHHHHHH
T ss_pred cHHHHHHHHHHHCCCCCCcCCHHHHHHHHHhc-CCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 77889999999999999999999999998762 226678999999999999999999999999986
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-78 Score=626.12 Aligned_cols=443 Identities=37% Similarity=0.668 Sum_probs=378.7
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
.+.++|.+.+.||+|+||+||+|.++.+++.||||++.+... .......+.+|+.+++++. ||||+++++++.+...+
T Consensus 19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~ 96 (486)
T 3mwu_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA-KNKDTSTILREVELLKKLD-HPNIMKLFEILEDSSSF 96 (486)
T ss_dssp HHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHH-BCSCHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEE
T ss_pred ChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccc-cchHHHHHHHHHHHHHhCC-CCCcCeEEEEEEcCCEE
Confidence 466889999999999999999999999999999999865432 2234577899999999998 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
++|||||.|++|.+.+...+.+++..+..++.||+.||.|||++||+||||||+|||++..+.+..+||+|||++.....
T Consensus 97 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 176 (486)
T 3mwu_A 97 YIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (486)
T ss_dssp EEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence 99999999999999998888999999999999999999999999999999999999997766677899999999988766
Q ss_pred CCcccccccCCCccCchhhcccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHH
Q 010013 224 GDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (520)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (520)
........||+.|+|||++.+.++.++|||||||++|+|++|..||.+....+....+..+...+..+.|..+++.+.+|
T Consensus 177 ~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 256 (486)
T 3mwu_A 177 NTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDL 256 (486)
T ss_dssp C----CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHHHHH
T ss_pred CCccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHHHHH
Confidence 65566678999999999999889999999999999999999999999999999999999988888777788999999999
Q ss_pred HHHhcccCCCCCCCHHHHHcCCccccCCCCCCC----cccHHHHHHHHHHHhhhHHHHHHHHHHHhhh-hHHHHhhHHHH
Q 010013 304 VKKMLHADPKERLSAAEVLNHPWMRVDGDASDK----PLDIAVLTRMKQFRAMNKLKKVALKVIAENL-SEEEIMGLKEM 378 (520)
Q Consensus 304 i~~~l~~dp~~Rps~~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~-~~~~~~~l~~~ 378 (520)
|.+||..||++|||+.++|+||||+........ +.....+.++++|...+++++.++.+++..+ +.++++++.++
T Consensus 257 i~~~L~~dp~~R~t~~~~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~l~~~~~~~~l~~~ 336 (486)
T 3mwu_A 257 IRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQAALLYMASKLTTLDETKQLTEI 336 (486)
T ss_dssp HHHHTCSSTTTSCCHHHHHHCHHHHHTCCCCCCGGGHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHcCCChhhCcCHHHHhcCHhhccCcccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 999999999999999999999999865543322 2224467788999999999999999999876 88999999999
Q ss_pred hcccCCCCCCcccHHHHhhhhhh----cCCCCC----------HHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhH
Q 010013 379 FKSMDTDNSGTITFEELKAGLPK----LGTRLS----------ESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVERE 444 (520)
Q Consensus 379 F~~~D~~~~g~i~~~e~~~~l~~----~~~~~~----------~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~ 444 (520)
|+.+|.|+||.|+.+||..++.. +|..++ .++++.+|..+|.|++|.|+|+||+.++.........
T Consensus 337 F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~ 416 (486)
T 3mwu_A 337 FRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSR 416 (486)
T ss_dssp HHHHCTTCSSSBCHHHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHHHHCTTCCSSBCHHHHHHHHSCTTTTCCH
T ss_pred HHHhCCCCCceeeHHHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHHHhcCCCCCcCcHHHHHHHHHhhhccchH
Confidence 99999999999999999665544 465555 7889999999999999999999999987765555667
Q ss_pred HHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 445 EHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 445 ~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
+.++.+|+.||.|+||+|+.+||+.++..+|.. ++++++++|..+|.|+||.|+|+||+++|..
T Consensus 417 ~~~~~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~ 481 (486)
T 3mwu_A 417 ERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQN 481 (486)
T ss_dssp HHHHHHHHHHCSSCSSSBCSSCC--------------------CCCCSSCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 889999999999999999999999999999877 7788999999999999999999999999976
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-64 Score=477.82 Aligned_cols=256 Identities=32% Similarity=0.599 Sum_probs=233.6
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+++.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|+++|++|+ |||||+++++|++++.+|||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEEeCCEEEEE
Confidence 56999999999999999999999999999999998765544556788999999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC-
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~- 225 (520)
||||+||+|.+++.+.+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|+.+....
T Consensus 111 mEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl---~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEECCCTTCEECCTTTT
T ss_pred EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEE---cCCCCEEEEEcCCceecCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999 457789999999999874332
Q ss_pred --cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHH
Q 010013 226 --VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (520)
Q Consensus 226 --~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (520)
.....+||+.|||||++.+ .|+.++|||||||++|+|++|++||.+.+..++...+.++.+.++ ..+++++++
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~p----~~~s~~~~d 263 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFP----EKFFPKARD 263 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC----TTCCHHHHH
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----cccCHHHHH
Confidence 3456789999999999875 589999999999999999999999999999999999998877664 368999999
Q ss_pred HHHHhcccCCCCCCCHHH------HHcCCccccC
Q 010013 303 IVKKMLHADPKERLSAAE------VLNHPWMRVD 330 (520)
Q Consensus 303 li~~~l~~dp~~Rps~~~------~l~~~~~~~~ 330 (520)
||.+||..||++|||++| +++||||+..
T Consensus 264 li~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~i 297 (311)
T 4aw0_A 264 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297 (311)
T ss_dssp HHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred HHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCC
Confidence 999999999999999988 5899999753
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-63 Score=482.24 Aligned_cols=258 Identities=29% Similarity=0.518 Sum_probs=229.6
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
....|.+.++||+|+||+||+|.++.+|+.||||++..... ...+.+.+|+.+|++++ |||||+++++|.+++.+|
T Consensus 72 p~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~---~~~~~~~~Ei~il~~l~-HpnIV~l~~~~~~~~~~~ 147 (346)
T 4fih_A 72 PRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQ-HENVVEMYNSYLVGDELW 147 (346)
T ss_dssp GGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC---SSGGGGHHHHHHHHHCC-CTTBCCEEEEEEETTEEE
T ss_pred hhHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch---hHHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCEEE
Confidence 45679999999999999999999999999999999975433 23466889999999998 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
||||||+||+|.+++.+ +++++..+..++.||+.||.|||++|||||||||+|||+ +.++.+||+|||+|+.+...
T Consensus 148 ivmEy~~gg~L~~~l~~-~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl---~~~g~vKl~DFGla~~~~~~ 223 (346)
T 4fih_A 148 VVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL---THDGRVKLSDFGFCAQVSKE 223 (346)
T ss_dssp EEECCCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECCSS
T ss_pred EEEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEE---CCCCCEEEecCcCceecCCC
Confidence 99999999999998865 579999999999999999999999999999999999999 45778999999999987543
Q ss_pred -CcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHH
Q 010013 225 -DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (520)
Q Consensus 225 -~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (520)
......+||+.|||||++.+ .|+.++|||||||++|+|++|++||.+.+..+.+..+..... .....+..+|+++++
T Consensus 224 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~-~~~~~~~~~s~~~~d 302 (346)
T 4fih_A 224 VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP-PRLKNLHKVSPSLKG 302 (346)
T ss_dssp SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSC-CCCSCGGGSCHHHHH
T ss_pred CCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-CCCCccccCCHHHHH
Confidence 34566799999999999875 599999999999999999999999999998888888876533 233345688999999
Q ss_pred HHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 303 IVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 303 li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
||.+||..||++|||+.|+|+||||+...
T Consensus 303 li~~~L~~dP~~R~ta~e~l~Hp~~~~~~ 331 (346)
T 4fih_A 303 FLDRLLVRDPAQRATAAELLKHPFLAKAG 331 (346)
T ss_dssp HHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred HHHHHcCCChhHCcCHHHHhcCHhhcCCC
Confidence 99999999999999999999999998653
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-62 Score=462.49 Aligned_cols=255 Identities=35% Similarity=0.642 Sum_probs=215.2
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+++.||+|+||+||+|.++.+|+.||+|++.+.........+.+.+|+.+|++++ |||||++++++.+++.+|+|
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCC-CCCCCeEEEEEEECCEEEEE
Confidence 57999999999999999999999999999999998766555566778999999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCc
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 226 (520)
|||| +|+|.+++.+.+++++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|+.......
T Consensus 92 mEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl---~~~~~vkl~DFGla~~~~~~~~ 167 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp EECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEE---CTTCCEEECCSSCC--------
T ss_pred EeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEE---CCCCCEEEeecCCCeecCCCCc
Confidence 9999 68999999999999999999999999999999999999999999999999 4577899999999998766655
Q ss_pred ccccccCCCccCchhhccc--CCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Q 010013 227 FKDLVGSAYYVAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (520)
Q Consensus 227 ~~~~~gt~~y~aPE~~~~~--~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (520)
....+||+.|||||++.+. ++.++|||||||++|+|++|+.||.+.+...+...+..+...++ ..+|+++++||
T Consensus 168 ~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li 243 (275)
T 3hyh_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP----KFLSPGAAGLI 243 (275)
T ss_dssp -------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC----TTSCHHHHHHH
T ss_pred cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHH
Confidence 6678999999999999754 46799999999999999999999999999999999988876654 36899999999
Q ss_pred HHhcccCCCCCCCHHHHHcCCccccC
Q 010013 305 KKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 305 ~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
.+||+.||++|||++|+|+||||+..
T Consensus 244 ~~~L~~dP~~R~s~~eil~hpw~k~~ 269 (275)
T 3hyh_A 244 KRMLIVNPLNRISIHEIMQDDWFKVD 269 (275)
T ss_dssp HHHSCSSGGGSCCHHHHHHCHHHHTT
T ss_pred HHHccCChhHCcCHHHHHcCcccccC
Confidence 99999999999999999999999753
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-61 Score=478.92 Aligned_cols=258 Identities=29% Similarity=0.522 Sum_probs=229.8
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
..+.|.+.++||+|+||.||+|.++.+|+.||||++..... ...+.+.+|+.+|++|+ |||||+++++|.+++.+|
T Consensus 149 p~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~---~~~~~~~~Ei~il~~l~-HpnIV~l~~~~~~~~~~~ 224 (423)
T 4fie_A 149 PRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQ-HENVVEMYNSYLVGDELW 224 (423)
T ss_dssp GGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC---SSGGGHHHHHHHHHHCC-CTTBCCEEEEEEETTEEE
T ss_pred hhHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccch---hHHHHHHHHHHHHHhCC-CCCCCceEEEEEECCEEE
Confidence 45679999999999999999999999999999999975432 33467889999999998 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
||||||+||+|.+++.. +++++..+..++.||+.||.|||++|||||||||+|||+ +.++.+||+|||+|+.+...
T Consensus 225 iVmEy~~gG~L~~~i~~-~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl---~~~g~vKl~DFGla~~~~~~ 300 (423)
T 4fie_A 225 VVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL---THDGRVKLSDFGFCAQVSKE 300 (423)
T ss_dssp EEEECCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEE---CTTCCEEECCCTTCEECCSS
T ss_pred EEEeCCCCCcHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEE---cCCCCEEEecCccceECCCC
Confidence 99999999999998865 579999999999999999999999999999999999999 45778999999999987543
Q ss_pred -CcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHH
Q 010013 225 -DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (520)
Q Consensus 225 -~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (520)
......+||+.|||||++.+ .|+.++|||||||++|+|++|++||.+....+.+..+...... ....+..+++++++
T Consensus 301 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~-~~~~~~~~s~~~~d 379 (423)
T 4fie_A 301 VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-RLKNLHKVSPSLKG 379 (423)
T ss_dssp CCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC-CCSCTTSSCHHHHH
T ss_pred CccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCC-CCcccccCCHHHHH
Confidence 34456789999999999875 5999999999999999999999999999998888888765432 23345689999999
Q ss_pred HHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 303 IVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 303 li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
||.+||..||++|||+.|+|+||||+...
T Consensus 380 li~~~L~~dP~~R~ta~ell~Hp~~~~~~ 408 (423)
T 4fie_A 380 FLDRLLVRDPAQRATAAELLKHPFLAKAG 408 (423)
T ss_dssp HHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred HHHHHcCCChhHCcCHHHHhcCHHhcCCC
Confidence 99999999999999999999999998653
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-61 Score=467.94 Aligned_cols=256 Identities=25% Similarity=0.539 Sum_probs=223.6
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+++.||+|+||+||+|+++.+|+.||||++.+... .....+.+.+|+.+|++|+ |||||++++++++++.+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~-HpnIV~~~~~~~~~~~~yiV 101 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM-SSKEREESRREVAVLANMK-HPNIVQYRESFEENGSLYIV 101 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTS-CHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHC-CHHHHHHHHHHHHHHHHCC-CCCCCcEEEEEEECCEEEEE
Confidence 689999999999999999999999999999999976543 3445678999999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 147 MDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
||||+||+|.+++...+ .+++..++.++.||+.||.|||++|||||||||+|||+ +.++.+||+|||+|+.....
T Consensus 102 mEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl---~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 102 MDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFL---TKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp EECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEE---CTTCCEEECSTTEESCCCHH
T ss_pred EeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEE---CCCCCEEEcccccceeecCC
Confidence 99999999999997543 57999999999999999999999999999999999999 45678999999999976543
Q ss_pred C-cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHH
Q 010013 225 D-VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (520)
Q Consensus 225 ~-~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (520)
. .....+||+.|||||++.+ .|+.++|||||||++|+|++|+.||.+.+..+++..+..+..+. .+..+|+++++
T Consensus 179 ~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~---~~~~~s~~~~~ 255 (350)
T 4b9d_A 179 VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPP---VSLHYSYDLRS 255 (350)
T ss_dssp HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCC---CCTTSCHHHHH
T ss_pred cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCC---CCccCCHHHHH
Confidence 2 2345689999999999875 59999999999999999999999999999999999988876543 23578999999
Q ss_pred HHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 303 IVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 303 li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
||.+||..||++|||+.|+|+||||+..
T Consensus 256 li~~~L~~dP~~R~s~~e~l~hp~~~~~ 283 (350)
T 4b9d_A 256 LVSQLFKRNPRDRPSVNSILEKGFIAKR 283 (350)
T ss_dssp HHHHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred HHHHHccCChhHCcCHHHHhcCHHhhcC
Confidence 9999999999999999999999999743
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-60 Score=453.80 Aligned_cols=256 Identities=22% Similarity=0.428 Sum_probs=221.1
Q ss_pred cce-eecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe----CC
Q 010013 67 NTY-IFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED----RH 141 (520)
Q Consensus 67 ~~y-~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~----~~ 141 (520)
++| ++.++||+|+||+||+|.++.++..||+|++..... .....+.+.+|+.+|++|+ |||||+++++|.+ +.
T Consensus 25 gr~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~-HpnIV~~~~~~~~~~~~~~ 102 (290)
T 3fpq_A 25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQ-HPNIVRFYDSWESTVKGKK 102 (290)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEEEEETTEE
T ss_pred CceEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhC-CHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEeeccCCCc
Confidence 344 778899999999999999999999999999976543 4445678999999999998 9999999999875 35
Q ss_pred eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcC--CeeecCCCCcEEeecCCCCCCeeEeeccccc
Q 010013 142 SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG--VMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~ 219 (520)
.+|||||||+||+|.+++.+.+.+++..+..++.||+.||.|||++| ||||||||+|||++ +.++.+||+|||+|+
T Consensus 103 ~~~lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~--~~~g~vKl~DFGla~ 180 (290)
T 3fpq_A 103 CIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT--GPTGSVKIGDLGLAT 180 (290)
T ss_dssp EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEES--STTSCEEECCTTGGG
T ss_pred EEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEE--CCCCCEEEEeCcCCE
Confidence 68999999999999999999999999999999999999999999998 99999999999995 235789999999998
Q ss_pred ccCCCCcccccccCCCccCchhhcccCCCcchhHHHHHHHHHHhhCCCCCCCCC-HHHHHHHHHcCCCCCCCCCCCCCCH
Q 010013 220 FFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGET-EQSIFDAILRGHIDFSSDPWPNISS 298 (520)
Q Consensus 220 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (520)
.... ......+||+.|||||++.+.|+.++|||||||++|+|+||+.||.+.. ...+...+..+..+. .....+++
T Consensus 181 ~~~~-~~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~--~~~~~~~~ 257 (290)
T 3fpq_A 181 LKRA-SFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPA--SFDKVAIP 257 (290)
T ss_dssp GCCT-TSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCG--GGGGCCCH
T ss_pred eCCC-CccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCC--CCCccCCH
Confidence 6543 3445678999999999998889999999999999999999999997654 445555555543322 22346789
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHcCCcccc
Q 010013 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 299 ~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
++++||.+||..||++|||+.|+|+||||+.
T Consensus 258 ~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~ 288 (290)
T 3fpq_A 258 EVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred HHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence 9999999999999999999999999999974
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-60 Score=455.18 Aligned_cols=254 Identities=30% Similarity=0.532 Sum_probs=220.6
Q ss_pred cceeecceeeccCCeEEEEEEEc---CCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHK---DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
++|.+++.||+|+||+||+|++. .+++.||+|++.+.... ......+.+|+.+|++++ |||||++++++.+++.+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~ 101 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLK-VRDRVRTKMERDILVEVN-HPFIVKLHYAFQTEGKL 101 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEE-EEECC------CCCCCCC-CTTEECEEEEEEETTEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcC-hHHHHHHHHHHHHHHHCC-CCCCCeEEEEEEECCEE
Confidence 57999999999999999999884 46789999999765432 223456889999999998 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
|+|||||+||+|.+++.+.+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|+....
T Consensus 102 ~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl---~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 102 YLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp EEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEE---CTTSCEEEESSEEEEC---
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEE---cCCCCEEecccccceeccC
Confidence 9999999999999999999999999999999999999999999999999999999999 4577899999999987543
Q ss_pred C-CcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHH
Q 010013 224 G-DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (520)
Q Consensus 224 ~-~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (520)
. ......+||+.|||||++.+ .|+.++|||||||++|+|++|+.||.+.+..+....+.+....++ ..+|++++
T Consensus 179 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p----~~~s~~~~ 254 (304)
T 3ubd_A 179 HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP----QFLSPEAQ 254 (304)
T ss_dssp --CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHH
T ss_pred CCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCC----CcCCHHHH
Confidence 3 33456789999999999874 599999999999999999999999999999999999988776554 46899999
Q ss_pred HHHHHhcccCCCCCCC-----HHHHHcCCcccc
Q 010013 302 DIVKKMLHADPKERLS-----AAEVLNHPWMRV 329 (520)
Q Consensus 302 ~li~~~l~~dp~~Rps-----~~~~l~~~~~~~ 329 (520)
+||.+||..||++||| ++|+++||||+.
T Consensus 255 ~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~ 287 (304)
T 3ubd_A 255 SLLRMLFKRNPANRLGAGPDGVEEIKRHSFFST 287 (304)
T ss_dssp HHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTT
T ss_pred HHHHHHcccCHHHCCCCCcCCHHHHHcCccccC
Confidence 9999999999999998 479999999975
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-59 Score=451.29 Aligned_cols=254 Identities=26% Similarity=0.361 Sum_probs=220.7
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.+.|.+.++||+|+||.||+|+++.+|+.||||++..... ..+|+.++++|+ |||||++++++.+++.+||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~--------~~~E~~il~~l~-HpnIV~l~~~~~~~~~~~i 127 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF--------RVEELVACAGLS-SPRIVPLYGAVREGPWVNI 127 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--------CTHHHHTTTTCC-CTTBCCEEEEEEETTEEEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh--------HHHHHHHHHhCC-CCCCCcEEEEEEECCEEEE
Confidence 3568999999999999999999999999999999975432 136999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCC-CeeEeecccccccCCC
Q 010013 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDS-PLKATDFGLSVFFKPG 224 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~-~~kl~Dfg~a~~~~~~ 224 (520)
|||||+||+|.+++.+.+++++..+..++.||+.||.|||++|||||||||+|||++ .++ .+||+|||+|+.+...
T Consensus 128 vmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~---~~g~~vKl~DFGla~~~~~~ 204 (336)
T 4g3f_A 128 FMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLS---SDGSRAALCDFGHALCLQPD 204 (336)
T ss_dssp EECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEC---TTSCCEEECCCTTCEEC---
T ss_pred EEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEe---CCCCEEEEeeCCCCeEccCC
Confidence 999999999999999989999999999999999999999999999999999999995 343 6999999999876543
Q ss_pred Cc------ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 010013 225 DV------FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (520)
Q Consensus 225 ~~------~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (520)
.. ....+||+.|||||++.+ .|+.++|||||||++|+|++|++||.+.....+...+.....++.. .++.++
T Consensus 205 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~-~~~~~s 283 (336)
T 4g3f_A 205 GLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIRE-IPPSCA 283 (336)
T ss_dssp ---------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGG-SCTTSC
T ss_pred CcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchh-cCccCC
Confidence 21 223579999999999875 5999999999999999999999999988777777777776554332 346889
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHH-------------HcCCccccCCC
Q 010013 298 SSAKDIVKKMLHADPKERLSAAEV-------------LNHPWMRVDGD 332 (520)
Q Consensus 298 ~~~~~li~~~l~~dp~~Rps~~~~-------------l~~~~~~~~~~ 332 (520)
+.+.+||.+||..||++|||+.|+ |+|||+.....
T Consensus 284 ~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~~~ 331 (336)
T 4g3f_A 284 PLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEYKE 331 (336)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSCCC
T ss_pred HHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCCCC
Confidence 999999999999999999999997 57999975543
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-58 Score=459.64 Aligned_cols=263 Identities=29% Similarity=0.436 Sum_probs=224.2
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe----
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED---- 139 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~---- 139 (520)
.+.++|.+++.||+|+||+||+|.++.+|+.||||++.... ......+.+.+|+.+|++|+ |||||++++++..
T Consensus 51 ~i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~-~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~ 128 (398)
T 4b99_A 51 DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAF-DVVTNAKRTLRELKILKHFK-HDNIIAIKDILRPTVPY 128 (398)
T ss_dssp CCCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTT-SSHHHHHHHHHHHHHHHHCC-CTTBCCEEEECCCSSCT
T ss_pred CCCCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccc-cchHHHHHHHHHHHHHHhcC-CCCcceEeeeeeccccc
Confidence 35678999999999999999999999999999999996543 23345577889999999998 9999999998764
Q ss_pred --CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccc
Q 010013 140 --RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (520)
Q Consensus 140 --~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~ 217 (520)
.+.+|||||||. |+|.+++.+.+++++..+..++.||+.||.|||++|||||||||+|||+ +.++.+||+|||+
T Consensus 129 ~~~~~~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~---~~~~~~Ki~DFGl 204 (398)
T 4b99_A 129 GEFKSVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLV---NENCELKIGDFGM 204 (398)
T ss_dssp TTCCCEEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTCCEEECCCTT
T ss_pred ccCCEEEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCcccccc---CCCCCEEEeecce
Confidence 367999999995 6899999998999999999999999999999999999999999999999 4577899999999
Q ss_pred ccccCCC-----CcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCC
Q 010013 218 SVFFKPG-----DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSS 290 (520)
Q Consensus 218 a~~~~~~-----~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~ 290 (520)
|+.+... ......+||+.|+|||++.+ .++.++||||+||++|+|++|++||.+.+..+.+..|......++.
T Consensus 205 a~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~ 284 (398)
T 4b99_A 205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSP 284 (398)
T ss_dssp CBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCG
T ss_pred eeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence 9876432 23356789999999998764 4799999999999999999999999999988888777543222111
Q ss_pred C---------------------------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 291 D---------------------------PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 291 ~---------------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
. .++.+++++.+||.+||..||++|||+.|+|+||||+....
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~ 353 (398)
T 4b99_A 285 AVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHD 353 (398)
T ss_dssp GGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTCC
T ss_pred HHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCCC
Confidence 0 12467899999999999999999999999999999986543
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-55 Score=458.71 Aligned_cols=264 Identities=35% Similarity=0.625 Sum_probs=240.6
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
.+.++|.+++.||+|+||.||+|.++.+|+.||+|++.... ....+.+.+|+.+|+.|+ |||||+++++|.+...+
T Consensus 154 ~il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~---~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~~ 229 (573)
T 3uto_A 154 HVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQTMSVLR-HPTLVNLHDAFEDDNEM 229 (573)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHHHTC-CTTBCCEEEEEECSSEE
T ss_pred cCccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc---hhhHHHHHHHHHHHHhCC-CCCCCeEEEEEEECCEE
Confidence 45578999999999999999999999999999999986532 334577899999999998 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 144 NLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
|||||||+||+|.+++.. .+.+++..+..++.||+.||.|||++||+||||||+|||++.+ ..+.+||+|||+|+.+.
T Consensus 230 ~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~-~~~~vKl~DFG~a~~~~ 308 (573)
T 3uto_A 230 VMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK-RSNELKLIDFGLTAHLD 308 (573)
T ss_dssp EEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS-SCCCEEECCCSSCEECC
T ss_pred EEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCC-CCCCEEEeeccceeEcc
Confidence 999999999999999864 4679999999999999999999999999999999999999642 34689999999999987
Q ss_pred CCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHH
Q 010013 223 PGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (520)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (520)
........+||+.|||||++.+ .|+.++|||||||++|+|++|..||.+....+.+..+......++...++.++++++
T Consensus 309 ~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 388 (573)
T 3uto_A 309 PKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGK 388 (573)
T ss_dssp TTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHH
T ss_pred CCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHH
Confidence 7777777899999999999875 589999999999999999999999999999999999999888888777889999999
Q ss_pred HHHHHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 302 DIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 302 ~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
+||.+||..||++|||+.|+|+||||+....
T Consensus 389 dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~ 419 (573)
T 3uto_A 389 DFIRKLLLADPNTRMTIHQALEHPWLTPGNA 419 (573)
T ss_dssp HHHHTTSCSSGGGSCCHHHHHHSTTTSCCCC
T ss_pred HHHHHHccCChhHCcCHHHHhcCcCcCCCCC
Confidence 9999999999999999999999999986543
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-55 Score=431.29 Aligned_cols=257 Identities=25% Similarity=0.462 Sum_probs=210.6
Q ss_pred cccccceeecceeeccCCeEEEEEEEc---CCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHK---DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~ 139 (520)
..+.++|.+++.||+|+||+||+|+++ .+++.||+|.+.+. .....+.+|+++|+.+.+|||||++++++.+
T Consensus 17 p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~-----~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~ 91 (361)
T 4f9c_A 17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT-----SHPIRIAAELQCLTVAGGQDNVMGVKYCFRK 91 (361)
T ss_dssp GGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT-----SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEE
T ss_pred CCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc-----cCHHHHHHHHHHHHHhcCCCCCceEEEEEEE
Confidence 346788999999999999999999875 45788999988643 2345688999999999779999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccc
Q 010013 140 RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (520)
Q Consensus 140 ~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~ 219 (520)
.+++|+|||||+||+|.+++ +.+++..+..++.||+.||.|||++||+||||||+|||++. +.+.+||+|||+|+
T Consensus 92 ~~~~~lvmE~~~g~~L~~~~---~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~--~~~~~kl~DFGla~ 166 (361)
T 4f9c_A 92 NDHVVIAMPYLEHESFLDIL---NSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNR--RLKKYALVDFGLAQ 166 (361)
T ss_dssp TTEEEEEEECCCCCCHHHHH---TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEET--TTTEEEECCCTTCE
T ss_pred CCEEEEEEeCCCcccHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeC--CCCeEEECcCCCCc
Confidence 99999999999999999988 36999999999999999999999999999999999999963 34679999999998
Q ss_pred ccCCCC-----------------------------cccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCC
Q 010013 220 FFKPGD-----------------------------VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPP 268 (520)
Q Consensus 220 ~~~~~~-----------------------------~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~p 268 (520)
...... .....+||+.|+|||++.+ .++.++||||+||++|+|++|+.|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~P 246 (361)
T 4f9c_A 167 GTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYP 246 (361)
T ss_dssp ECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSS
T ss_pred ccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCC
Confidence 653221 1234579999999998864 489999999999999999999999
Q ss_pred CCCCC-HHHHHHHHHcC--------------------------------------C------------CCCCCCCCCCCC
Q 010013 269 FWGET-EQSIFDAILRG--------------------------------------H------------IDFSSDPWPNIS 297 (520)
Q Consensus 269 f~~~~-~~~~~~~~~~~--------------------------------------~------------~~~~~~~~~~~~ 297 (520)
|.... ..+.+..+... . .......|..+|
T Consensus 247 f~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is 326 (361)
T 4f9c_A 247 FYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVP 326 (361)
T ss_dssp SSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCC
T ss_pred CCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCC
Confidence 96543 33333332210 0 001112356789
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHcCCcccc
Q 010013 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 298 ~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
+++.+||.+||..||++|||++|+|+||||+.
T Consensus 327 ~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~ 358 (361)
T 4f9c_A 327 DEAYDLLDKLLDLNPASRITAEEALLHPFFKD 358 (361)
T ss_dssp HHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTT
T ss_pred HHHHHHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence 99999999999999999999999999999974
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-55 Score=422.54 Aligned_cols=248 Identities=22% Similarity=0.428 Sum_probs=214.4
Q ss_pred ccceeecceeeccCCeEEEEEEEcC-----CCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKD-----TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~ 140 (520)
+++|.+.+.||+|+||+||+|.+.. ++..||||++... .....+.+.+|+.+|++|+ |||||++++++.++
T Consensus 12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~-HpnIV~l~g~~~~~ 87 (299)
T 4asz_A 12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNLQ-HEHIVKFYGVCVEG 87 (299)
T ss_dssp GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC---CHHHHHHHHHHHHHHTTCC-CTTBCCEEEEECSS
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC---ChHHHHHHHHHHHHHHhCC-CCCCccEEEEEeeC
Confidence 3679999999999999999998753 5788999998643 3345678999999999998 99999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHhc-------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCC
Q 010013 141 HSVNLIMDLCAGGELFDRIIAK-------------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAED 207 (520)
Q Consensus 141 ~~~~lv~e~~~g~~L~~~l~~~-------------~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~ 207 (520)
+.++||||||+||+|.++|... ..+++..+..++.||+.||.|||+++||||||||+|||+ +.+
T Consensus 88 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl---~~~ 164 (299)
T 4asz_A 88 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLV---GEN 164 (299)
T ss_dssp SSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGG
T ss_pred CEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEE---CCC
Confidence 9999999999999999999764 369999999999999999999999999999999999999 456
Q ss_pred CCeeEeecccccccCCCCcc---cccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHH
Q 010013 208 SPLKATDFGLSVFFKPGDVF---KDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAIL 282 (520)
Q Consensus 208 ~~~kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~ 282 (520)
+.+||+|||+|+........ ....||+.|||||++. +.++.++|||||||++|||+| |+.||.+.+..++...+.
T Consensus 165 ~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~ 244 (299)
T 4asz_A 165 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECIT 244 (299)
T ss_dssp GCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH
T ss_pred CcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 78999999999876443321 2346899999999986 569999999999999999998 999999999999998888
Q ss_pred cCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 283 RGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.+..... .+.+|+++.+|+.+||+.||++|||+.++++
T Consensus 245 ~~~~~~~---p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~ 282 (299)
T 4asz_A 245 QGRVLQR---PRTCPQEVYELMLGCWQREPHMRKNIKGIHT 282 (299)
T ss_dssp HTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cCCCCCC---CccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 8764322 2578999999999999999999999999943
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-55 Score=423.53 Aligned_cols=252 Identities=28% Similarity=0.440 Sum_probs=199.2
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC-----
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH----- 141 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~----- 141 (520)
++|.+++.||+|+||+||+|+++.+|+.||||++.... .....+.+.+|+.+|++|+ |||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~~E~~il~~l~-HpnIV~~~~~~~~~~~~~~~ 81 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLE-HPGIVRYFNAWLEKNTTEKL 81 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS--SHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEEEC-----
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC--CHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEEecCccccc
Confidence 46999999999999999999999999999999986432 3344577899999999998 999999999987544
Q ss_pred -------eEEEEEeccCCCchHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCee
Q 010013 142 -------SVNLIMDLCAGGELFDRIIAKGH---YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLK 211 (520)
Q Consensus 142 -------~~~lv~e~~~g~~L~~~l~~~~~---l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~k 211 (520)
++|+|||||+||+|.+++..... .++..+..++.||+.||.|||++||+||||||+|||++ .++.+|
T Consensus 82 ~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~---~~~~vK 158 (299)
T 4g31_A 82 QPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFT---MDDVVK 158 (299)
T ss_dssp -----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTCCEE
T ss_pred cccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEEC---CCCcEE
Confidence 47999999999999999987654 45567889999999999999999999999999999994 567899
Q ss_pred EeecccccccCCCCc-------------ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHH-H
Q 010013 212 ATDFGLSVFFKPGDV-------------FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQ-S 276 (520)
Q Consensus 212 l~Dfg~a~~~~~~~~-------------~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~-~ 276 (520)
|+|||+|+....... ....+||+.|||||++.+ .|+.++|||||||++|+|++ ||.+.... .
T Consensus 159 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~ 235 (299)
T 4g31_A 159 VGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVR 235 (299)
T ss_dssp ECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHH
T ss_pred EccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHH
Confidence 999999987643221 233579999999999875 59999999999999999996 77654322 2
Q ss_pred HHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
....+.....+ ..++..++.+.+||.+||+.||++|||+.|+|+||||+..
T Consensus 236 ~~~~~~~~~~p---~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 286 (299)
T 4g31_A 236 TLTDVRNLKFP---PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDL 286 (299)
T ss_dssp HHHHHHTTCCC---HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC
T ss_pred HHHHHhcCCCC---CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCC
Confidence 23333333221 1223456778899999999999999999999999999754
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-55 Score=418.41 Aligned_cols=249 Identities=22% Similarity=0.421 Sum_probs=204.5
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.+++.++++||+|+||+||+|.++. .||||+++... ......+.+.+|+.+|++++ |||||++++++.. +.++|
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~~-~~~~~~~~f~~E~~il~~l~-HpNIV~l~g~~~~-~~~~i 108 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVD-PTPEQFQAFRNEVAVLRKTR-HVNILLFMGYMTK-DNLAI 108 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS---EEEEEECCCSS-CCHHHHHHHHHHHHHHTTCC-CTTBCCEEEEECS-SSCEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEecC-CCHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEC-CeEEE
Confidence 4678899999999999999998754 58999986433 34455688999999999998 9999999998754 56899
Q ss_pred EEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 146 IMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
|||||+||+|.+++... +++++..+..|+.||+.||.|||++|||||||||+|||++ .++.+||+|||+|+.....
T Consensus 109 VmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~---~~~~~Ki~DFGla~~~~~~ 185 (307)
T 3omv_A 109 VTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLH---EGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp EEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEE---TTEEEEECCCSSCBC----
T ss_pred EEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEEC---CCCcEEEeeccCceecccC
Confidence 99999999999999764 5799999999999999999999999999999999999995 5678999999999875432
Q ss_pred ---CcccccccCCCccCchhhcc----cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHH-HHcCCCCCC-CCCCCC
Q 010013 225 ---DVFKDLVGSAYYVAPEVLRR----NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDA-ILRGHIDFS-SDPWPN 295 (520)
Q Consensus 225 ---~~~~~~~gt~~y~aPE~~~~----~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~-~~~~~~~~~-~~~~~~ 295 (520)
......+||+.|||||++.+ .|+.++|||||||++|||+||+.||.+......... +..+..... ...++.
T Consensus 186 ~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 265 (307)
T 3omv_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKN 265 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTT
T ss_pred CcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCccccccc
Confidence 23345689999999999853 488899999999999999999999988665544444 444332221 233467
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 296 ISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 296 ~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
+|+.+.+|+.+||+.||++|||+.|+++
T Consensus 266 ~~~~l~~li~~cl~~dP~~RPs~~ei~~ 293 (307)
T 3omv_A 266 CPKAMKRLVADCVKKVKEERPLFPQILS 293 (307)
T ss_dssp SCHHHHHHHHHHTCSSSTTSCCHHHHHH
T ss_pred chHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 8999999999999999999999998754
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-54 Score=421.59 Aligned_cols=248 Identities=23% Similarity=0.390 Sum_probs=209.4
Q ss_pred ccceeecceeeccCCeEEEEEEEcC-----CCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKD-----TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~ 140 (520)
.++|.+.++||+|+||+||+|.++. +++.||||++... .....+.+.+|+.+|++++ |||||++++++.+.
T Consensus 40 ~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~-HpnIV~l~g~~~~~ 115 (329)
T 4aoj_A 40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTMLQ-HQHIVRFFGVCTEG 115 (329)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC---SHHHHHHHHHHHHHHTTCC-CTTBCCEEEEECSS
T ss_pred HHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC---CHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEEEC
Confidence 3568889999999999999998753 5789999999643 3445678999999999998 99999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHhc---------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCC
Q 010013 141 HSVNLIMDLCAGGELFDRIIAK---------------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA 205 (520)
Q Consensus 141 ~~~~lv~e~~~g~~L~~~l~~~---------------~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~ 205 (520)
+.++||||||++|+|.+++... +++++..+..|+.||+.||.|||+++||||||||+|||++
T Consensus 116 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~--- 192 (329)
T 4aoj_A 116 RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG--- 192 (329)
T ss_dssp SSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE---
T ss_pred CEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEEC---
Confidence 9999999999999999998753 3589999999999999999999999999999999999994
Q ss_pred CCCCeeEeecccccccCCCC---cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHH
Q 010013 206 EDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDA 280 (520)
Q Consensus 206 ~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~ 280 (520)
.+..+||+|||+|+...... ......||+.|||||++.+ .++.++|||||||++|||+| |+.||.+....+....
T Consensus 193 ~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~ 272 (329)
T 4aoj_A 193 QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDC 272 (329)
T ss_dssp TTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHH
T ss_pred CCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 57789999999998764332 2234679999999999865 59999999999999999999 9999999999888888
Q ss_pred HHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 281 ILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
+..+.... ....+|+++.+|+.+||+.||++|||+.|+++
T Consensus 273 i~~g~~~~---~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~ 312 (329)
T 4aoj_A 273 ITQGRELE---RPRACPPEVYAIMRGCWQREPQQRHSIKDVHA 312 (329)
T ss_dssp HHHTCCCC---CCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHH
T ss_pred HHcCCCCC---CcccccHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence 88765322 22478999999999999999999999999976
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-54 Score=418.17 Aligned_cols=250 Identities=22% Similarity=0.378 Sum_probs=215.6
Q ss_pred ccceeecceeeccCCeEEEEEEEc-----CCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHK-----DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~ 140 (520)
...+++.++||+|+||+||+|.+. .+++.||||++.... .....+.+.+|+.++++++ |||||+++|++.++
T Consensus 25 ~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~--~~~~~~~f~~E~~il~~l~-HpNIV~l~g~~~~~ 101 (308)
T 4gt4_A 25 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA--EGPLREEFRHEAMLRARLQ-HPNVVCLLGVVTKD 101 (308)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C--CC-CHHHHHHHHHHHHHCC-CTTBCCEEEEECSS
T ss_pred HHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc--ChHHHHHHHHHHHHHHhCC-CCCCCCcceEEEEC
Confidence 356888999999999999999874 357889999986432 3345678999999999998 99999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecC
Q 010013 141 HSVNLIMDLCAGGELFDRIIAK----------------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSS 204 (520)
Q Consensus 141 ~~~~lv~e~~~g~~L~~~l~~~----------------~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~ 204 (520)
+.+++|||||++|+|.++|... ..+++..+..|+.||+.||.|||+++||||||||+|||+
T Consensus 102 ~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl--- 178 (308)
T 4gt4_A 102 QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLV--- 178 (308)
T ss_dssp SSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---
T ss_pred CEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEE---
Confidence 9999999999999999999653 358999999999999999999999999999999999999
Q ss_pred CCCCCeeEeecccccccCCCC---cccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHH
Q 010013 205 AEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFD 279 (520)
Q Consensus 205 ~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~ 279 (520)
++++.+||+|||+|+...... ......||+.|||||++. +.++.++|||||||++|||+| |..||.+.+..++..
T Consensus 179 ~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~ 258 (308)
T 4gt4_A 179 YDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVE 258 (308)
T ss_dssp CGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHH
T ss_pred CCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 456789999999998764332 234467999999999886 569999999999999999998 899999999999988
Q ss_pred HHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 280 AILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
.+..+.... ..+.+|..+.+|+.+||+.||++|||+.|++++
T Consensus 259 ~i~~~~~~~---~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~ 300 (308)
T 4gt4_A 259 MIRNRQVLP---CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSR 300 (308)
T ss_dssp HHHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHcCCCCC---CcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 888765432 225789999999999999999999999999874
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-54 Score=425.89 Aligned_cols=302 Identities=36% Similarity=0.688 Sum_probs=264.9
Q ss_pred cccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 010013 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (520)
Q Consensus 61 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~ 140 (520)
....+.++|.+.+.||+|+||.||+|.++.+++.||+|++..... .....+.+.+|+.+++++. ||||+++++++.+.
T Consensus 23 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~ 100 (362)
T 2bdw_A 23 ASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQ-HPNIVRLHDSIQEE 100 (362)
T ss_dssp -CCHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-CHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEECS
T ss_pred CCCCcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccC-CHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEEeC
Confidence 344567889999999999999999999999999999999975443 3345677899999999998 99999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccc
Q 010013 141 HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (520)
Q Consensus 141 ~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 220 (520)
+..|+||||++|++|.+.+...+.+++..+..++.||+.||.|||++||+||||||+|||++..+.+..+||+|||++..
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~ 180 (362)
T 2bdw_A 101 SFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 180 (362)
T ss_dssp SEEEEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred CEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence 99999999999999999998888899999999999999999999999999999999999997655567899999999988
Q ss_pred cCCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHH
Q 010013 221 FKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (520)
Q Consensus 221 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (520)
...........||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+..+...++...|..+++.
T Consensus 181 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 260 (362)
T 2bdw_A 181 VNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPE 260 (362)
T ss_dssp CTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCHH
T ss_pred ecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHH
Confidence 766555566789999999999875 5899999999999999999999999999999999999998888887778889999
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHcCCccccCCCCCCCcccHHHHHHHHHHHhhhHHHHHHHHHHH
Q 010013 300 AKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIA 364 (520)
Q Consensus 300 ~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 364 (520)
+.+||.+||..||++|||+.++|+||||...............+..+++|...++++..++..+.
T Consensus 261 ~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 325 (362)
T 2bdw_A 261 AKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDTVDCLKKFNARRKLKGAILTTMI 325 (362)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHTTSHHHHTHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCChhhCcCHHHHhcCcccCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999997543222233345567788888888888877766553
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-54 Score=449.24 Aligned_cols=255 Identities=27% Similarity=0.449 Sum_probs=220.3
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHH---HHHHHhccCCCCeeEEEEEEEeCCe
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE---VQIMHHLTGHRNIVELKGAYEDRHS 142 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e---~~~l~~l~~hp~iv~l~~~~~~~~~ 142 (520)
.++|.+++.||+|+||.||+|+++.+|+.||+|++.+...........+.+| +.+++.+. |||||+++++|.+.+.
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~-HP~IV~l~~~f~~~~~ 266 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD-CPFIVCMSYAFHTPDK 266 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSC-CTTBCCEEEEEECSSE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCC-CCCEeEEEEEEEECCE
Confidence 4679999999999999999999999999999999976544333333444444 55555666 9999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
+|||||||+||+|.+++.+.+.+++..+..++.||+.||.|||++|||||||||+|||+ +.++++||+|||+|+.+.
T Consensus 267 lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILl---d~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 267 LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFS 343 (689)
T ss_dssp EEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECS
T ss_pred EEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEE---eCCCCEEecccceeeecC
Confidence 99999999999999999999999999999999999999999999999999999999999 567889999999998875
Q ss_pred CCCcccccccCCCccCchhhc-c-cCCCcchhHHHHHHHHHHhhCCCCCCCC---CHHHHHHHHHcCCCCCCCCCCCCCC
Q 010013 223 PGDVFKDLVGSAYYVAPEVLR-R-NYGAEADIWSAGVILYILLSGVPPFWGE---TEQSIFDAILRGHIDFSSDPWPNIS 297 (520)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~-~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (520)
... ....+||+.|||||++. + .|+.++|||||||++|+|++|.+||.+. ....+...+......++ ..+|
T Consensus 344 ~~~-~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p----~~~S 418 (689)
T 3v5w_A 344 KKK-PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP----DSFS 418 (689)
T ss_dssp SCC-CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCC----TTSC
T ss_pred CCC-CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCC----ccCC
Confidence 443 35678999999999985 3 5899999999999999999999999764 33455566666555443 4689
Q ss_pred HHHHHHHHHhcccCCCCCCC-----HHHHHcCCcccc
Q 010013 298 SSAKDIVKKMLHADPKERLS-----AAEVLNHPWMRV 329 (520)
Q Consensus 298 ~~~~~li~~~l~~dp~~Rps-----~~~~l~~~~~~~ 329 (520)
+++++||.+||..||++|++ ++|+++||||+.
T Consensus 419 ~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~ 455 (689)
T 3v5w_A 419 PELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 455 (689)
T ss_dssp HHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTT
T ss_pred HHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccC
Confidence 99999999999999999998 799999999975
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-54 Score=437.62 Aligned_cols=299 Identities=37% Similarity=0.684 Sum_probs=262.0
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~ 142 (520)
..+.++|.+.+.||+|+||.||+|.++.+|+.+|+|++..... .....+.+.+|+.+++++. ||||+++++++.+.+.
T Consensus 7 ~~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~-~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~ 84 (444)
T 3soa_A 7 TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL-SARDHQKLEREARICRLLK-HPNIVRLHDSISEEGH 84 (444)
T ss_dssp CHHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSC-HHHHHHHHHHHHHHHHHCC-BTTBCCEEEEEECSSE
T ss_pred ccccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccC-CHHHHHHHHHHHHHHHhCC-CcCCCeEEEEEEECCE
Confidence 3466889999999999999999999999999999999876443 2334567899999999998 9999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
.|+||||+.||+|.+.+...+.+++..+..++.||+.||.|||++||+||||||+|||++....++.+||+|||++....
T Consensus 85 ~~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~ 164 (444)
T 3soa_A 85 HYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE 164 (444)
T ss_dssp EEEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCC
T ss_pred EEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEec
Confidence 99999999999999999999999999999999999999999999999999999999999865567889999999998765
Q ss_pred CCC-cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHH
Q 010013 223 PGD-VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300 (520)
Q Consensus 223 ~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (520)
... ......||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.........+..+...++...|+.+++.+
T Consensus 165 ~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 244 (444)
T 3soa_A 165 GEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEA 244 (444)
T ss_dssp TTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHH
T ss_pred CCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccCCHHH
Confidence 433 3345689999999999875 58999999999999999999999999999999999999999888888888999999
Q ss_pred HHHHHHhcccCCCCCCCHHHHHcCCccccCCCCCCCcccHHHHHHHHHHHhhhHHHHHHHHHH
Q 010013 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVI 363 (520)
Q Consensus 301 ~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i 363 (520)
.+||.+||..||++|||+.|+|+||||+..............+..+++|...++++..++..+
T Consensus 245 ~~li~~~L~~dP~~Rpta~e~L~hp~~~~~~~~~~~~~~~~~~~~l~~~~~~~klk~~~~~~~ 307 (444)
T 3soa_A 245 KDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGAILTVM 307 (444)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHHHSCTTHHHHHHSCCCCCHHHHHHHHHHHHHHHHHTTCSCEE
T ss_pred HHHHHHHcCCChhHCCCHHHHhcCccccCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999754332233334566788888988888887776655
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-52 Score=410.84 Aligned_cols=296 Identities=39% Similarity=0.690 Sum_probs=238.9
Q ss_pred cccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 010013 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (520)
Q Consensus 61 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~ 140 (520)
....+.++|.+.+.||+|+||.||+|.++.+++.||+|++.... ..+.+.+|+.+++++. ||||+++++++...
T Consensus 47 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~ 120 (349)
T 2w4o_A 47 NRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-----DKKIVRTEIGVLLRLS-HPNIIKLKEIFETP 120 (349)
T ss_dssp BCSCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC---------------CHHHHHCC-CTTBCCEEEEEECS
T ss_pred ccccccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-----hHHHHHHHHHHHHhCC-CCCCcceeeeEecC
Confidence 34556788999999999999999999999999999999986432 2356889999999998 99999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccc
Q 010013 141 HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (520)
Q Consensus 141 ~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 220 (520)
...++||||++|++|.+++...+.+++..+..++.||+.||.|||+.||+||||||+|||++..+.++.+||+|||++..
T Consensus 121 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~ 200 (349)
T 2w4o_A 121 TEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKI 200 (349)
T ss_dssp SEEEEEECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC----
T ss_pred CeEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccc
Confidence 99999999999999999998888899999999999999999999999999999999999997655578899999999987
Q ss_pred cCCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCCCCH
Q 010013 221 FKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQ-SIFDAILRGHIDFSSDPWPNISS 298 (520)
Q Consensus 221 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 298 (520)
...........||+.|+|||++.+ .++.++|||||||++|+|++|..||...... .....+......+....++.++.
T Consensus 201 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 280 (349)
T 2w4o_A 201 VEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSL 280 (349)
T ss_dssp ------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCH
T ss_pred cCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCH
Confidence 655444456789999999999875 5899999999999999999999999776544 46677777776666666778999
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHcCCccccCCCCCCCcccHHHHHHHHHHHhhhHHHHHHHHHHH
Q 010013 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIA 364 (520)
Q Consensus 299 ~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 364 (520)
.+.+||.+||..||++|||+.++|+||||....... ........++++|....++++.+..+++
T Consensus 281 ~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (349)
T 2w4o_A 281 NAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKAANF--VHMDTAQKKLQEFNARRKLKAAVKAVVA 344 (349)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHHHHSTTTTSTTCCC--SCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcCcccCCCccch--hhhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998654322 2234566778888888888888777655
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-53 Score=414.45 Aligned_cols=252 Identities=24% Similarity=0.376 Sum_probs=211.6
Q ss_pred cccceeecceeeccCCeEEEEEEEcCC-----CcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDT-----KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~ 139 (520)
-.++|.+++.||+|+||+||+|.+..+ ++.||||.+.... .....+.+.+|+.+|.++.+|||||+++++|..
T Consensus 62 ~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~--~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~ 139 (353)
T 4ase_A 62 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACTK 139 (353)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC
T ss_pred cHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc--ChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEe
Confidence 457899999999999999999998754 3679999986432 234457799999999999866999999999865
Q ss_pred -CCeEEEEEeccCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEee
Q 010013 140 -RHSVNLIMDLCAGGELFDRIIAK----------------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFS 202 (520)
Q Consensus 140 -~~~~~lv~e~~~g~~L~~~l~~~----------------~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~ 202 (520)
++.++||||||++|+|.++|... ..+++..+..++.||+.||.|||+++||||||||+|||++
T Consensus 140 ~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~ 219 (353)
T 4ase_A 140 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS 219 (353)
T ss_dssp TTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred cCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeC
Confidence 46789999999999999999753 3489999999999999999999999999999999999994
Q ss_pred cCCCCCCeeEeecccccccCCCCc---ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCC-HHH
Q 010013 203 SSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGET-EQS 276 (520)
Q Consensus 203 ~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~-~~~ 276 (520)
.++.+||+|||+|+.+..... .....||+.|||||++. +.|+.++|||||||++|||+| |..||.+.. ...
T Consensus 220 ---~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~ 296 (353)
T 4ase_A 220 ---EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 296 (353)
T ss_dssp ---GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH
T ss_pred ---CCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHH
Confidence 567899999999997654332 23457899999999886 469999999999999999998 999998865 444
Q ss_pred HHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
+...+..+.... ..+.+++++.+++.+||+.||++|||+.|+++|
T Consensus 297 ~~~~i~~g~~~~---~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~ 341 (353)
T 4ase_A 297 FCRRLKEGTRMR---APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341 (353)
T ss_dssp HHHHHHHTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHcCCCCC---CCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence 555555553321 124679999999999999999999999999986
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-52 Score=410.73 Aligned_cols=266 Identities=38% Similarity=0.642 Sum_probs=239.4
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCc---ccHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR---DDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~---~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~ 139 (520)
..+.+.|.+++.||+|+||.||+|.++.+|+.||+|++.+...... ...+.+.+|+.+++++. ||||+++++++.+
T Consensus 8 ~~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~ 86 (361)
T 2yab_A 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL-HPNIITLHDVYEN 86 (361)
T ss_dssp SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCC-CTTBCCEEEEEEC
T ss_pred CChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCC-CcCCCcEEEEEEe
Confidence 4567889999999999999999999999999999999976543221 23578999999999998 9999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCC-CCCeeEeecccc
Q 010013 140 RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAE-DSPLKATDFGLS 218 (520)
Q Consensus 140 ~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~-~~~~kl~Dfg~a 218 (520)
...+++||||++||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+...+. ...+||+|||++
T Consensus 87 ~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 87 RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp SSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred CCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 9999999999999999999988889999999999999999999999999999999999999964221 237999999999
Q ss_pred cccCCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 010013 219 VFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (520)
Q Consensus 219 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (520)
.............||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+......++...|..++
T Consensus 167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s 246 (361)
T 2yab_A 167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTS 246 (361)
T ss_dssp EECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSC
T ss_pred eEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccCCC
Confidence 98766655667789999999999875 58999999999999999999999999999999999999888877766677899
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHcCCcccc
Q 010013 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 298 ~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
..+++||.+||..||++|||+.|+|+||||+.
T Consensus 247 ~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~ 278 (361)
T 2yab_A 247 ELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278 (361)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSC
T ss_pred HHHHHHHHHHCCCChhHCcCHHHHhcCcCcCC
Confidence 99999999999999999999999999999974
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-52 Score=417.65 Aligned_cols=263 Identities=33% Similarity=0.648 Sum_probs=218.8
Q ss_pred ccccceeec-ceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe---
Q 010013 64 DVRNTYIFG-RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED--- 139 (520)
Q Consensus 64 ~~~~~y~~~-~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~--- 139 (520)
.+.++|.+. +.||+|+||+||+|.++.+++.||||++.. ...+.+|+.++.++.+||||+++++++..
T Consensus 58 ~~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~--------~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~ 129 (400)
T 1nxk_A 58 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIVRIVDVYENLYA 129 (400)
T ss_dssp CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC--------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEET
T ss_pred cccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc--------chhHHHHHHHHHHhcCCCCcceEeEEEeeccc
Confidence 345678776 789999999999999999999999999853 14577899988777669999999999876
Q ss_pred -CCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecc
Q 010013 140 -RHSVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (520)
Q Consensus 140 -~~~~~lv~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg 216 (520)
...+|+||||++||+|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||++..+.++.+||+|||
T Consensus 130 ~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG 209 (400)
T 1nxk_A 130 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFG 209 (400)
T ss_dssp TEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCT
T ss_pred CCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecc
Confidence 667999999999999999998753 59999999999999999999999999999999999999765457889999999
Q ss_pred cccccCCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHH----HHHHHHHcCCCCCCCC
Q 010013 217 LSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQ----SIFDAILRGHIDFSSD 291 (520)
Q Consensus 217 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~----~~~~~~~~~~~~~~~~ 291 (520)
+++...........+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.... .....+..+...++..
T Consensus 210 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~ 289 (400)
T 1nxk_A 210 FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNP 289 (400)
T ss_dssp TCEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTT
T ss_pred cccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCc
Confidence 9997765555566789999999999864 5899999999999999999999999775532 2455666777777777
Q ss_pred CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCCCC
Q 010013 292 PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDAS 334 (520)
Q Consensus 292 ~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~~~ 334 (520)
.|..++.++.+||.+||..||++|||+.++|+||||.......
T Consensus 290 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~~~~ 332 (400)
T 1nxk_A 290 EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 332 (400)
T ss_dssp TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTTTTSC
T ss_pred ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCCCCCC
Confidence 7788999999999999999999999999999999998654433
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-51 Score=401.24 Aligned_cols=258 Identities=35% Similarity=0.636 Sum_probs=233.6
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
..++|.+.+.||+|+||.||+|.+..+|+.||||++..... .....+.+.+|+.+++.++ ||||+++++++...+.+|
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~ 90 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKILN-HPNIVKLFEVIETEKTLY 90 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEE
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcC-CHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEECCEEE
Confidence 44679999999999999999999999999999999875433 4455678899999999998 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
+||||++|++|.+++...+++++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 91 lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll---~~~~~~kl~DFG~a~~~~~~ 167 (328)
T 3fe3_A 91 LIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLL---DADMNIKIADFGFSNEFTVG 167 (328)
T ss_dssp EEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECSTTCCGGGSSS
T ss_pred EEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEE---cCCCCEEEeeccCceecCCC
Confidence 999999999999999988999999999999999999999999999999999999999 45678999999999887766
Q ss_pred CcccccccCCCccCchhhccc-C-CCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHH
Q 010013 225 DVFKDLVGSAYYVAPEVLRRN-Y-GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (520)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~~-~-~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (520)
......+||+.|+|||++.+. + +.++|||||||++|+|++|..||.+.........+..+...++. .+++.+.+
T Consensus 168 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~----~~s~~~~~ 243 (328)
T 3fe3_A 168 GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMSTDCEN 243 (328)
T ss_dssp CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT----TSCHHHHH
T ss_pred CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC----CCCHHHHH
Confidence 666778899999999998654 4 47899999999999999999999999999999888888765543 57899999
Q ss_pred HHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 303 IVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 303 li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
||.+||..||.+|||+.|+|+||||+...
T Consensus 244 li~~~L~~dP~~R~t~~eil~h~~~~~~~ 272 (328)
T 3fe3_A 244 LLKRFLVLNPIKRGTLEQIMKDRWINAGH 272 (328)
T ss_dssp HHHHHCCSSTTTSCCHHHHTTCTTTTTTC
T ss_pred HHHHHCCCChhHCcCHHHHhcCHhhcCCC
Confidence 99999999999999999999999998643
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-52 Score=409.60 Aligned_cols=299 Identities=34% Similarity=0.643 Sum_probs=242.2
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccC--CcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI--NRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~ 141 (520)
.+.++|.+.+.||+|+||.||+|.++.+++.||||++...... .....+.+.+|+.+++.+. ||||+++++++.+.+
T Consensus 21 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~ 99 (351)
T 3c0i_A 21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLK-HPHIVELLETYSSDG 99 (351)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCC-CTTBCCEEEEEEETT
T ss_pred ccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCC-CCCCCcEEEEEEeCC
Confidence 3567899999999999999999999999999999998643321 1224578999999999998 999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccc
Q 010013 142 SVNLIMDLCAGGELFDRIIAK----GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~l~~~----~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~ 217 (520)
.+|+|||||+|++|.+.+... ..+++..+..++.||+.||.|||++||+||||||+|||++.++....+||+|||+
T Consensus 100 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 100 MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 999999999999998877543 3589999999999999999999999999999999999997655566799999999
Q ss_pred ccccCCCCc-ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCC
Q 010013 218 SVFFKPGDV-FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295 (520)
Q Consensus 218 a~~~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (520)
+........ .....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+. .......+..+...+....+..
T Consensus 180 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~i~~~~~~~~~~~~~~ 258 (351)
T 3c0i_A 180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT-KERLFEGIIKGKYKMNPRQWSH 258 (351)
T ss_dssp CEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS-HHHHHHHHHHTCCCCCHHHHTT
T ss_pred eeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc-HHHHHHHHHcCCCCCCcccccc
Confidence 987754432 345679999999999865 5899999999999999999999999875 4556667777766665555678
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCCCCCCcccHHHHHHHHHHHhhhHHHHHHHHHHH
Q 010013 296 ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIA 364 (520)
Q Consensus 296 ~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 364 (520)
++..+.+||.+||..||++|||+.++|+||||+..............+.++++|...++++..+...+.
T Consensus 259 ~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 327 (351)
T 3c0i_A 259 ISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARRKLKGAVLAAVS 327 (351)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTHHHHSCCSCCHHHHHHHHHHHHHHC----------
T ss_pred CCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCCccccccccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999997533222222234456777788777777776666554
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-52 Score=404.15 Aligned_cols=262 Identities=31% Similarity=0.629 Sum_probs=236.7
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
.+.++|.+++.||+|+||.||+|.++.+++.+|+|++... ....+.+.+|+.+++.+. ||||+++++++.+.+.+
T Consensus 2 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~----~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~ 76 (321)
T 1tki_A 2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK----GTDQVLVKKEISILNIAR-HRNILHLHESFESMEEL 76 (321)
T ss_dssp CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC----THHHHHHHHHHHHHHHSC-CTTBCCEEEEEEETTEE
T ss_pred chhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC----cccHHHHHHHHHHHHhCC-CCCCCeEeEEEecCCEE
Confidence 4568899999999999999999999999999999998643 234567889999999998 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 144 NLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
++||||++|++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||++.. .++.+||+|||++....
T Consensus 77 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~-~~~~~kl~Dfg~a~~~~ 155 (321)
T 1tki_A 77 VMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTR-RSSTIKIIEFGQARQLK 155 (321)
T ss_dssp EEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS-SCCCEEECCCTTCEECC
T ss_pred EEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccC-CCCCEEEEECCCCeECC
Confidence 99999999999999997654 69999999999999999999999999999999999999642 26789999999999887
Q ss_pred CCCcccccccCCCccCchhhccc-CCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHH
Q 010013 223 PGDVFKDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (520)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (520)
.........||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.........+......++...++.++..+.
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 235 (321)
T 1tki_A 156 PGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAM 235 (321)
T ss_dssp TTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHH
T ss_pred CCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHH
Confidence 66666667899999999998754 78999999999999999999999999999999999998888777666778999999
Q ss_pred HHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 302 DIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 302 ~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
++|.+||..||++|||+.|+|+||||+...
T Consensus 236 ~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~ 265 (321)
T 1tki_A 236 DFVDRLLVKERKSRMTASEALQHPWLKQKI 265 (321)
T ss_dssp HHHHTTSCSSGGGSCCHHHHHHSHHHHSCG
T ss_pred HHHHHHcCCChhHCcCHHHHhcChhhccCc
Confidence 999999999999999999999999997543
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-51 Score=404.07 Aligned_cols=257 Identities=28% Similarity=0.535 Sum_probs=227.0
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.++|.+.+.||+|+||.||+|+++.+++.||+|++.+.........+.+.+|..+++.+.+||||+++++++.+.+.+|+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 36799999999999999999999999999999999765443445567788999999998669999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC-C
Q 010013 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-G 224 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~-~ 224 (520)
||||++||+|.+++.+.+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.... .
T Consensus 102 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl---~~~g~ikL~DFG~a~~~~~~~ 178 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLL---DHEGHCKLADFGMCKEGICNG 178 (353)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCSCC--
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEE---CCCCCEEEccccceeecccCC
Confidence 99999999999999998899999999999999999999999999999999999999 4577899999999986432 2
Q ss_pred CcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHH
Q 010013 225 DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (520)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (520)
......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+......++. .++..+.++
T Consensus 179 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~----~~~~~~~~l 254 (353)
T 3txo_A 179 VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT----WLHEDATGI 254 (353)
T ss_dssp -------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT----TSCHHHHHH
T ss_pred ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCHHHHHH
Confidence 33455689999999999865 5899999999999999999999999999999999999888766543 578999999
Q ss_pred HHHhcccCCCCCCCH------HHHHcCCcccc
Q 010013 304 VKKMLHADPKERLSA------AEVLNHPWMRV 329 (520)
Q Consensus 304 i~~~l~~dp~~Rps~------~~~l~~~~~~~ 329 (520)
|.+||..||++||++ .++++||||+.
T Consensus 255 i~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~ 286 (353)
T 3txo_A 255 LKSFMTKNPTMRLGSLTQGGEHAILRHPFFKE 286 (353)
T ss_dssp HHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTT
T ss_pred HHHHhhhCHHHccCCcccCCHHHHhhCCcccC
Confidence 999999999999998 89999999975
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-50 Score=402.49 Aligned_cols=258 Identities=36% Similarity=0.569 Sum_probs=209.5
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
..++|.+.+.||+|+||.||+|.++.+++.||+|++..... ..+.+.+|+.++++++ ||||+++++++.+...++
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~ 92 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA----IDENVQREIINHRSLR-HPNIVRFKEVILTPTHLA 92 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT----SCHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc----ccHHHHHHHHHHHhCC-CCCCCcEEEEEeeCCEEE
Confidence 45789999999999999999999999999999999865332 2366889999999998 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
+||||++|++|.+++...+++++..+..++.||+.||.|||++||+||||||+|||++.+ ....+||+|||+++.....
T Consensus 93 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~-~~~~~kl~Dfg~a~~~~~~ 171 (361)
T 3uc3_A 93 IIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGS-PAPRLKICDFGYSKSSVLH 171 (361)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSS-SSCCEEECCCCCC------
T ss_pred EEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCC-CCceEEEeecCcccccccc
Confidence 999999999999999888899999999999999999999999999999999999999532 2345999999999865444
Q ss_pred CcccccccCCCccCchhhcc-cCCC-cchhHHHHHHHHHHhhCCCCCCCCCH----HHHHHHHHcCCCCCCCCCCCCCCH
Q 010013 225 DVFKDLVGSAYYVAPEVLRR-NYGA-EADIWSAGVILYILLSGVPPFWGETE----QSIFDAILRGHIDFSSDPWPNISS 298 (520)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~-~~~~-~~Dv~slG~~l~~ll~g~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 298 (520)
.......||+.|+|||++.+ .++. ++|||||||++|+|++|..||.+... ......+......++. ...+++
T Consensus 172 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~s~ 249 (361)
T 3uc3_A 172 SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPD--DIRISP 249 (361)
T ss_dssp ---------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCT--TSCCCH
T ss_pred CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCC--cCCCCH
Confidence 44455689999999998864 4544 48999999999999999999987543 4455555555444433 246899
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 299 ~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
.+.+||.+||..||++|||+.|+|+||||...
T Consensus 250 ~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~ 281 (361)
T 3uc3_A 250 ECCHLISRIFVADPATRISIPEIKTHSWFLKN 281 (361)
T ss_dssp HHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTT
T ss_pred HHHHHHHHHccCChhHCcCHHHHHhCcchhcC
Confidence 99999999999999999999999999999654
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-50 Score=396.69 Aligned_cols=255 Identities=32% Similarity=0.590 Sum_probs=229.4
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+.+.||+|+||.||+|.++.+|+.||+|++.+.........+.+.+|+.+++++. ||||+++++++.+.+.+|+|
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR-HPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCC-CTTBCCEEEEEECSSEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCC-CCcCcceEEEEEeCCEEEEE
Confidence 67999999999999999999999999999999997654333445678899999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC-CCC
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGD 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~-~~~ 225 (520)
|||++||+|.+++.+.+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++... ...
T Consensus 84 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~vkL~DFG~a~~~~~~~~ 160 (337)
T 1o6l_A 84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCSCCTTC
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEE---CCCCCEEEeeccchhhcccCCC
Confidence 9999999999999988899999999999999999999999999999999999999 456789999999998643 233
Q ss_pred cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Q 010013 226 VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (520)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (520)
.....+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+......++ ..+++.+.++|
T Consensus 161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li 236 (337)
T 1o6l_A 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP----RTLSPEAKSLL 236 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHHH
T ss_pred cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHH
Confidence 4456789999999999864 589999999999999999999999999998888888887766554 36799999999
Q ss_pred HHhcccCCCCCC-----CHHHHHcCCcccc
Q 010013 305 KKMLHADPKERL-----SAAEVLNHPWMRV 329 (520)
Q Consensus 305 ~~~l~~dp~~Rp-----s~~~~l~~~~~~~ 329 (520)
.+||+.||++|| ++.++++||||..
T Consensus 237 ~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~ 266 (337)
T 1o6l_A 237 AGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266 (337)
T ss_dssp HHHTCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred HHHhhcCHHHhcCCCCCCHHHHHcCCCcCC
Confidence 999999999999 9999999999974
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-50 Score=396.97 Aligned_cols=267 Identities=39% Similarity=0.678 Sum_probs=237.0
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCc---ccHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR---DDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~---~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~ 139 (520)
..+.+.|.+.+.||+|+||.||+|.++.+|+.||+|++........ ...+.+.+|+.+++++. ||||+++++++.+
T Consensus 7 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~ 85 (326)
T 2y0a_A 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLHEVYEN 85 (326)
T ss_dssp SCHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCC-CTTBCCEEEEEEC
T ss_pred CCcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCC-CCCCCcEEEEEEe
Confidence 4566889999999999999999999999999999999876443221 24678999999999998 9999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCC-CCCCeeEeecccc
Q 010013 140 RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA-EDSPLKATDFGLS 218 (520)
Q Consensus 140 ~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~-~~~~~kl~Dfg~a 218 (520)
....++||||++|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++ ....+||+|||++
T Consensus 86 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 165 (326)
T 2y0a_A 86 KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165 (326)
T ss_dssp SSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred CCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence 999999999999999999998888899999999999999999999999999999999999996432 2337999999999
Q ss_pred cccCCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 010013 219 VFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (520)
Q Consensus 219 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (520)
.............||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+......++...++.++
T Consensus 166 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (326)
T 2y0a_A 166 HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245 (326)
T ss_dssp EECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTTSC
T ss_pred eECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccccccCC
Confidence 98765555566789999999999874 58999999999999999999999999999888888888777666655556889
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 298 ~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
..+.+||.+||..||++|||+.++|+||||+..
T Consensus 246 ~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~ 278 (326)
T 2y0a_A 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278 (326)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCC
T ss_pred HHHHHHHHHHccCChhhCCCHHHHhcCCCccCC
Confidence 999999999999999999999999999999743
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-50 Score=388.14 Aligned_cols=266 Identities=39% Similarity=0.800 Sum_probs=241.1
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~ 142 (520)
..+.++|.+.+.||+|+||.||+|.++.++..+|+|++..... ...+.+.+|+.+++++. ||||+++++++.+...
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~ 80 (277)
T 3f3z_A 5 GDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKSLD-HPNIIRLYETFEDNTD 80 (277)
T ss_dssp -CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC---SCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSE
T ss_pred hhhhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc---chHHHHHHHHHHHHhCC-CCCEeeEEEEEecCCe
Confidence 3466889999999999999999999999999999999865432 34578899999999997 9999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
.++||||++|++|.+++...+.+++..+..++.|++.||.|||++||+||||||+||++..++.++.+||+|||++....
T Consensus 81 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~ 160 (277)
T 3f3z_A 81 IYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 160 (277)
T ss_dssp EEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred EEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceecc
Confidence 99999999999999999988899999999999999999999999999999999999999665667889999999998877
Q ss_pred CCCcccccccCCCccCchhhcccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHH
Q 010013 223 PGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (520)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (520)
.........||+.|+|||++.+.++.++||||||+++|+|++|..||......+....+..+...++...+..+++.+.+
T Consensus 161 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (277)
T 3f3z_A 161 PGKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAES 240 (277)
T ss_dssp TTSCBCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHH
T ss_pred CccchhccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHHHH
Confidence 66666677899999999999888999999999999999999999999999998888888888777666555678999999
Q ss_pred HHHHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 303 IVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 303 li~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
+|.+||+.||++|||+.++|+||||+....
T Consensus 241 li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 270 (277)
T 3f3z_A 241 LIRRLLTKSPKQRITSLQALEHEWFEKQLS 270 (277)
T ss_dssp HHHHHTCSSTTTSCCHHHHTTSHHHHHHHC
T ss_pred HHHHHccCChhhCcCHHHHhcCHHHhcccc
Confidence 999999999999999999999999975433
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-50 Score=384.62 Aligned_cols=267 Identities=38% Similarity=0.749 Sum_probs=242.6
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
.+.++|.+.+.||+|+||.||+|.++.+++.||+|++..... .....+.+.+|+.++++++ ||||+++++++......
T Consensus 3 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 80 (284)
T 3kk8_A 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQ-HPNIVRLHDSIQEESFH 80 (284)
T ss_dssp TTTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-CHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEE
T ss_pred hhhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccC-CHHHHHHHHHHHHHHHHcC-CCCcCeEEEEEEcCCEE
Confidence 456889999999999999999999999999999999875443 3445677899999999998 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
++||||++|++|.+.+...+.+++..+..++.||+.||.|||++||+||||||+||+++.++....+||+|||.+.....
T Consensus 81 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 81 YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp EEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred EEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 99999999999999999888999999999999999999999999999999999999997666667799999999988766
Q ss_pred CCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHH
Q 010013 224 GDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (520)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (520)
........||+.|+|||++.+ .++.++||||||+++|+|++|..||.+.........+..+...++...+..+++.+.+
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (284)
T 3kk8_A 161 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKS 240 (284)
T ss_dssp SCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHH
T ss_pred CccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHHHHH
Confidence 655566789999999999865 4889999999999999999999999999999999999888888777777889999999
Q ss_pred HHHHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 303 IVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 303 li~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
+|.+||+.||++|||+.|+|+||||+....
T Consensus 241 li~~~l~~dp~~Rps~~~~l~h~~~~~~~~ 270 (284)
T 3kk8_A 241 LIDSMLTVNPKKRITADQALKVPWICNRER 270 (284)
T ss_dssp HHHHHSCSSTTTSCCHHHHTTSHHHHSCCC
T ss_pred HHHHHcccChhhCCCHHHHhcCccccCChh
Confidence 999999999999999999999999986543
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-50 Score=400.46 Aligned_cols=257 Identities=28% Similarity=0.552 Sum_probs=223.9
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.++|.+.+.||+|+||.||+|+++.+++.||+|++.+.........+.+.+|..++.++.+||||+++++++.+.+.+|+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 36799999999999999999999999999999999876655555567788999999998669999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc-CCC
Q 010013 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF-KPG 224 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~-~~~ 224 (520)
||||++||+|..++.+.+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.. ...
T Consensus 131 V~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl---~~~g~ikL~DFGla~~~~~~~ 207 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPG 207 (396)
T ss_dssp EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCCCCTT
T ss_pred EEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEE---CCCCCEEEeecceeeecccCC
Confidence 99999999999999988899999999999999999999999999999999999999 45778999999999863 334
Q ss_pred CcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCC---------CHHHHHHHHHcCCCCCCCCCCC
Q 010013 225 DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGE---------TEQSIFDAILRGHIDFSSDPWP 294 (520)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~---------~~~~~~~~~~~~~~~~~~~~~~ 294 (520)
......+||+.|+|||++.+ .++.++|||||||++|+|++|..||... ........+......++ .
T Consensus 208 ~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p----~ 283 (396)
T 4dc2_A 208 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP----R 283 (396)
T ss_dssp CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCC----T
T ss_pred CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCC----C
Confidence 45566789999999999875 5899999999999999999999999643 23445666666655544 3
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCH------HHHHcCCcccc
Q 010013 295 NISSSAKDIVKKMLHADPKERLSA------AEVLNHPWMRV 329 (520)
Q Consensus 295 ~~~~~~~~li~~~l~~dp~~Rps~------~~~l~~~~~~~ 329 (520)
.++..+.+||.+||+.||++||++ .++++||||+.
T Consensus 284 ~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~ 324 (396)
T 4dc2_A 284 SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 324 (396)
T ss_dssp TSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTT
T ss_pred cCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccC
Confidence 679999999999999999999985 79999999974
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-49 Score=382.95 Aligned_cols=262 Identities=36% Similarity=0.689 Sum_probs=225.5
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
++.++|.+.+.||+|+||.||+|.++.++..+|+|++.... .....+.+.+|+.+++++. ||||+++++++.+....
T Consensus 19 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~ 95 (285)
T 3is5_A 19 TIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR--SQVPMEQIEAEIEVLKSLD-HPNIIKIFEVFEDYHNM 95 (285)
T ss_dssp CHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG--CCSCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEE
T ss_pred ChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccc--cchhHHHHHHHHHHHHhCC-CchHHhHHHheecCCeE
Confidence 45678999999999999999999999999999999987543 2334678999999999998 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccc
Q 010013 144 NLIMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~----~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~ 219 (520)
++||||+++++|.+.+.. ...+++..+..++.||+.||.|||++||+||||||+||+++..+.++.+||+|||++.
T Consensus 96 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~ 175 (285)
T 3is5_A 96 YIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAE 175 (285)
T ss_dssp EEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCC
T ss_pred EEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecce
Confidence 999999999999998854 3679999999999999999999999999999999999999765566789999999998
Q ss_pred ccCCCCcccccccCCCccCchhhcccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHH
Q 010013 220 FFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (520)
Q Consensus 220 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (520)
............||+.|+|||++.+.++.++||||||+++|+|++|..||.+.........+......+... ...+++.
T Consensus 176 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 254 (285)
T 3is5_A 176 LFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVE-CRPLTPQ 254 (285)
T ss_dssp C----------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC---CCCCHH
T ss_pred ecCCcccCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccc-cCcCCHH
Confidence 776555556678999999999998889999999999999999999999999988888777776655544332 2357899
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHcCCcccc
Q 010013 300 AKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 300 ~~~li~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
+.++|.+||+.||++|||+.|+|+||||+.
T Consensus 255 ~~~li~~~L~~dP~~Rps~~e~l~hp~f~~ 284 (285)
T 3is5_A 255 AVDLLKQMLTKDPERRPSAAQVLHHEWFKQ 284 (285)
T ss_dssp HHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred HHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence 999999999999999999999999999974
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-50 Score=395.18 Aligned_cols=258 Identities=28% Similarity=0.500 Sum_probs=229.5
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.++|.+.+.||+|+||.||+|.++.+|+.||+|++.+.........+.+..|..++..+..||||+++++++.+.+.+|+
T Consensus 16 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~l 95 (345)
T 1xjd_A 16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFF 95 (345)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEE
Confidence 46799999999999999999999999999999999765433334567788999999988559999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC-C
Q 010013 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-G 224 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~-~ 224 (520)
||||++||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.... .
T Consensus 96 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~vkL~DFG~a~~~~~~~ 172 (345)
T 1xjd_A 96 VMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGD 172 (345)
T ss_dssp EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCCCCTT
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEE---CCCCCEEEeEChhhhhcccCC
Confidence 99999999999999988899999999999999999999999999999999999999 4567899999999986432 2
Q ss_pred CcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHH
Q 010013 225 DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (520)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (520)
......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+......++ ..+++.+.+|
T Consensus 173 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~l 248 (345)
T 1xjd_A 173 AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP----RWLEKEAKDL 248 (345)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHH
T ss_pred CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCCCCC----cccCHHHHHH
Confidence 33456789999999999865 589999999999999999999999999999888888887765543 3578999999
Q ss_pred HHHhcccCCCCCCCHH-HHHcCCccccC
Q 010013 304 VKKMLHADPKERLSAA-EVLNHPWMRVD 330 (520)
Q Consensus 304 i~~~l~~dp~~Rps~~-~~l~~~~~~~~ 330 (520)
|.+||..||++||++. ++++||||+..
T Consensus 249 i~~lL~~dp~~R~~~~~~i~~hp~f~~~ 276 (345)
T 1xjd_A 249 LVKLFVREPEKRLGVRGDIRQHPLFREI 276 (345)
T ss_dssp HHHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred HHHHhcCCHhHcCCChHHHHcCccccCC
Confidence 9999999999999998 99999999753
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-50 Score=399.73 Aligned_cols=259 Identities=34% Similarity=0.616 Sum_probs=225.2
Q ss_pred ccceee--cceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 66 RNTYIF--GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 66 ~~~y~~--~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
...|.+ .+.||+|+||.||+|.+..+|+.||+|++.... ....+.+.+|+.+++++. ||||+++++++.+.+.+
T Consensus 86 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~ 161 (373)
T 2x4f_A 86 NSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG---MKDKEEVKNEISVMNQLD-HANLIQLYDAFESKNDI 161 (373)
T ss_dssp GGTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEE
T ss_pred ccceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc---cccHHHHHHHHHHHHhCC-CCCCCeEEEEEEECCEE
Confidence 344555 678999999999999999999999999986533 234577899999999998 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 144 NLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
++||||++|++|.+++... ..+++..+..++.||+.||.|||+.||+||||||+|||+.. +.++.+||+|||++....
T Consensus 162 ~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~-~~~~~~kl~DFG~a~~~~ 240 (373)
T 2x4f_A 162 VLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVN-RDAKQIKIIDFGLARRYK 240 (373)
T ss_dssp EEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEE-TTTTEEEECCCSSCEECC
T ss_pred EEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEec-CCCCcEEEEeCCCceecC
Confidence 9999999999999988764 46999999999999999999999999999999999999954 235679999999999876
Q ss_pred CCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHH
Q 010013 223 PGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (520)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (520)
.........||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+......++...++.+++.+.
T Consensus 241 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 320 (373)
T 2x4f_A 241 PREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAK 320 (373)
T ss_dssp TTCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHH
T ss_pred CccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHH
Confidence 6655566689999999999864 588899999999999999999999999999888888888877777666778999999
Q ss_pred HHHHHhcccCCCCCCCHHHHHcCCcccc
Q 010013 302 DIVKKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 302 ~li~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
+||.+||..||++|||+.++|+||||+.
T Consensus 321 ~li~~~L~~dp~~Rps~~e~l~hp~~~~ 348 (373)
T 2x4f_A 321 EFISKLLIKEKSWRISASEALKHPWLSD 348 (373)
T ss_dssp HHHHTTSCSSGGGSCCHHHHHHSHHHHC
T ss_pred HHHHHHcCCChhhCCCHHHHhcCcCcCC
Confidence 9999999999999999999999999974
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-49 Score=388.38 Aligned_cols=254 Identities=29% Similarity=0.595 Sum_probs=228.8
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.++|.+.+.||+|+||.||+|.++.+|+.||+|++.+.........+.+.+|+.+++.+. ||||+++++++.+...+|+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~Iv~~~~~~~~~~~~~l 83 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT-HPFIIRMWGTFQDAQQIFM 83 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCC-BTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCC-CCCCceEeEEEEeCCEEEE
Confidence 367999999999999999999999999999999997654333345677889999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
||||++||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.....
T Consensus 84 v~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~~kL~Dfg~a~~~~~-- 158 (318)
T 1fot_A 84 IMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL---DKNGHIKITDFGFAKYVPD-- 158 (318)
T ss_dssp EECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEE---CTTSCEEECCCSSCEECSS--
T ss_pred EEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEE---cCCCCEEEeecCcceecCC--
Confidence 99999999999999998899999999999999999999999999999999999999 4577899999999987543
Q ss_pred cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Q 010013 226 VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (520)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (520)
.....+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+......++ +.++.++.++|
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~li 234 (318)
T 1fot_A 159 VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP----PFFNEDVKDLL 234 (318)
T ss_dssp CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHHH
T ss_pred ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----CCCCHHHHHHH
Confidence 2345689999999999864 589999999999999999999999999998888888888766554 36789999999
Q ss_pred HHhcccCCCCCC-----CHHHHHcCCcccc
Q 010013 305 KKMLHADPKERL-----SAAEVLNHPWMRV 329 (520)
Q Consensus 305 ~~~l~~dp~~Rp-----s~~~~l~~~~~~~ 329 (520)
.+||..||++|| +++++++||||+.
T Consensus 235 ~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~ 264 (318)
T 1fot_A 235 SRLITRDLSQRLGNLQNGTEDVKNHPWFKE 264 (318)
T ss_dssp HHHTCSCTTTCTTSSTTTTHHHHTSGGGSS
T ss_pred HHHhccCHHHcCCCcCCCHHHHhcCccccC
Confidence 999999999999 9999999999974
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-49 Score=398.19 Aligned_cols=264 Identities=35% Similarity=0.631 Sum_probs=235.9
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
.+.+.|.+.+.||+|+||.||+|.++.+++.+|+|++.... ......+.+|+.+++++. ||||+++++++.+...+
T Consensus 48 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~---~~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~~ 123 (387)
T 1kob_A 48 SVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY---PLDKYTVKNEISIMNQLH-HPKLINLHDAFEDKYEM 123 (387)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTCC-STTBCCEEEEEECSSEE
T ss_pred ccccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc---hhhHHHHHHHHHHHHhCC-CcCCCeEEEEEEeCCEE
Confidence 45678999999999999999999999999999999986432 233467889999999998 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 144 NLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
++||||+.|++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||++. ...+.+||+|||++....
T Consensus 124 ~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~-~~~~~vkL~DFG~a~~~~ 202 (387)
T 1kob_A 124 VLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET-KKASSVKIIDFGLATKLN 202 (387)
T ss_dssp EEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-TTCCCEEECCCTTCEECC
T ss_pred EEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEec-CCCCceEEEecccceecC
Confidence 99999999999999887654 6999999999999999999999999999999999999963 234679999999999876
Q ss_pred CCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHH
Q 010013 223 PGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (520)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (520)
.........||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+......+....+..+++.+.
T Consensus 203 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 282 (387)
T 1kob_A 203 PDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAK 282 (387)
T ss_dssp TTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHH
T ss_pred CCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHHH
Confidence 6555556689999999999864 488999999999999999999999999998888888888877777777788999999
Q ss_pred HHHHHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 302 DIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 302 ~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
+||.+||..||++|||+.++|+||||+....
T Consensus 283 ~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 313 (387)
T 1kob_A 283 DFIKNLLQKEPRKRLTVHDALEHPWLKGDHS 313 (387)
T ss_dssp HHHHTTSCSSGGGSCCHHHHHTSTTTSSCCT
T ss_pred HHHHHHcCCChhHCcCHHHHhhCccccCCcc
Confidence 9999999999999999999999999986543
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-50 Score=396.53 Aligned_cols=264 Identities=37% Similarity=0.657 Sum_probs=230.6
Q ss_pred ccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 010013 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (520)
Q Consensus 62 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~ 141 (520)
...+.++|.+.+.||+|+||.||+|.++.+++.||+|++.+... ...+|+.++.++.+||||+++++++.+..
T Consensus 17 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~ 89 (342)
T 2qr7_A 17 SIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-------DPTEEIEILLRYGQHPNIITLKDVYDDGK 89 (342)
T ss_dssp --CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-------CCHHHHHHHHHHTTSTTBCCEEEEEECSS
T ss_pred ccCccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-------ChHHHHHHHHHhcCCCCcCeEEEEEEcCC
Confidence 34567889999999999999999999999999999999965432 23468888988866999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCC-CCCCeeEeecccccc
Q 010013 142 SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA-EDSPLKATDFGLSVF 220 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~-~~~~~kl~Dfg~a~~ 220 (520)
.+|+||||++||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+...+ ....+||+|||++..
T Consensus 90 ~~~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~ 169 (342)
T 2qr7_A 90 YVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ 169 (342)
T ss_dssp EEEEEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEE
T ss_pred EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCccc
Confidence 9999999999999999999888999999999999999999999999999999999999985432 224599999999987
Q ss_pred cCCC-CcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCC---CCHHHHHHHHHcCCCCCCCCCCCC
Q 010013 221 FKPG-DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWG---ETEQSIFDAILRGHIDFSSDPWPN 295 (520)
Q Consensus 221 ~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~---~~~~~~~~~~~~~~~~~~~~~~~~ 295 (520)
.... ......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+ ....++...+..+...+....|+.
T Consensus 170 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 249 (342)
T 2qr7_A 170 LRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNS 249 (342)
T ss_dssp CBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTT
T ss_pred CcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCcccccc
Confidence 6443 23445689999999999875 488899999999999999999999986 456778888888888887777889
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 296 ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 296 ~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
++..+.+||.+||..||++|||+.++|+||||.....
T Consensus 250 ~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~~~~ 286 (342)
T 2qr7_A 250 VSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQ 286 (342)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHTGGG
T ss_pred CCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecCccc
Confidence 9999999999999999999999999999999975443
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-49 Score=390.29 Aligned_cols=257 Identities=28% Similarity=0.550 Sum_probs=225.6
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.++|.+.+.||+|+||.||+|+++.+++.||+|++.+.........+.+.+|..+++++.+||||+++++++.+.+.+|+
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 36799999999999999999999999999999999876655556677889999999998559999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC-CC
Q 010013 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PG 224 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~-~~ 224 (520)
||||++||+|.+++.+.+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++... ..
T Consensus 88 v~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~~kL~DFG~a~~~~~~~ 164 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPG 164 (345)
T ss_dssp EECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCGGGCBCSCCTT
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEE---CCCCCEEEEeccccccccCCC
Confidence 99999999999999988899999999999999999999999999999999999999 456789999999998643 33
Q ss_pred CcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCC---------CCHHHHHHHHHcCCCCCCCCCCC
Q 010013 225 DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWG---------ETEQSIFDAILRGHIDFSSDPWP 294 (520)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~---------~~~~~~~~~~~~~~~~~~~~~~~ 294 (520)
......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.. .........+......++ .
T Consensus 165 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p----~ 240 (345)
T 3a8x_A 165 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP----R 240 (345)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCC----T
T ss_pred CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCC----C
Confidence 34456789999999999865 589999999999999999999999975 233445566666655543 3
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCH------HHHHcCCcccc
Q 010013 295 NISSSAKDIVKKMLHADPKERLSA------AEVLNHPWMRV 329 (520)
Q Consensus 295 ~~~~~~~~li~~~l~~dp~~Rps~------~~~l~~~~~~~ 329 (520)
.++..+.++|.+||..||++||++ .++++||||+.
T Consensus 241 ~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~ 281 (345)
T 3a8x_A 241 SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 281 (345)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTT
T ss_pred CCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCC
Confidence 678999999999999999999995 89999999974
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-50 Score=394.41 Aligned_cols=257 Identities=27% Similarity=0.514 Sum_probs=229.9
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.++|.+.+.||+|+||.||+|.++.+++.||+|++.+.........+.+..|..++..+..||+|+++++++.+.+.+|+
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 46799999999999999999999999999999999765443344567788999999988669999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC-CC
Q 010013 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PG 224 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~-~~ 224 (520)
||||++||+|.+++.+.+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++... ..
T Consensus 99 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll---~~~g~vkL~DFG~a~~~~~~~ 175 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIWDG 175 (353)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCCCCTT
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEE---cCCCcEEEEeCCcccccccCC
Confidence 99999999999999988899999999999999999999999999999999999999 457789999999998643 23
Q ss_pred CcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHH
Q 010013 225 DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (520)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (520)
......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+......++ ..++..+.+|
T Consensus 176 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~l 251 (353)
T 2i0e_A 176 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP----KSMSKEAVAI 251 (353)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHH
T ss_pred cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCC----CCCCHHHHHH
Confidence 34456789999999999864 589999999999999999999999999999999999888766654 3679999999
Q ss_pred HHHhcccCCCCCCC-----HHHHHcCCcccc
Q 010013 304 VKKMLHADPKERLS-----AAEVLNHPWMRV 329 (520)
Q Consensus 304 i~~~l~~dp~~Rps-----~~~~l~~~~~~~ 329 (520)
|.+||..||++||+ +.++++||||+.
T Consensus 252 i~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~ 282 (353)
T 2i0e_A 252 CKGLMTKHPGKRLGCGPEGERDIKEHAFFRY 282 (353)
T ss_dssp HHHHTCSCTTSCTTCSTTHHHHHHTSGGGTT
T ss_pred HHHHhhcCHHHcCCCCCCCHHHHhcCccccC
Confidence 99999999999994 699999999974
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-50 Score=396.84 Aligned_cols=256 Identities=28% Similarity=0.569 Sum_probs=218.3
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHH-HhccCCCCeeEEEEEEEeCCeEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIM-HHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l-~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
.++|.+.+.||+|+||.||+|+++.+++.||+|++.+...........+.+|..++ +.+. ||||+++++++.+.+.+|
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~-hp~Iv~l~~~~~~~~~~~ 115 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK-HPFLVGLHFSFQTADKLY 115 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCC-CTTBCCEEEEEECSSEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCC-CCCCCCEEEEEEeCCEEE
Confidence 46799999999999999999999999999999999876654444556677777764 5555 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC-C
Q 010013 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-P 223 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~-~ 223 (520)
+||||++||+|.+++.+.+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++... .
T Consensus 116 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll---~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 116 FVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILL---DSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCCCBCGGGBCC
T ss_pred EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEE---CCCCCEEEeeCccccccccC
Confidence 999999999999999988899999999999999999999999999999999999999 457789999999998643 3
Q ss_pred CCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHH
Q 010013 224 GDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (520)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (520)
.......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+......++ +.++..+.+
T Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~ 268 (373)
T 2r5t_A 193 NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK----PNITNSARH 268 (373)
T ss_dssp CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCCCCC----SSSCHHHHH
T ss_pred CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCC----CCCCHHHHH
Confidence 334456789999999999865 589999999999999999999999999999888888888765543 468999999
Q ss_pred HHHHhcccCCCCCCCH----HHHHcCCcccc
Q 010013 303 IVKKMLHADPKERLSA----AEVLNHPWMRV 329 (520)
Q Consensus 303 li~~~l~~dp~~Rps~----~~~l~~~~~~~ 329 (520)
||.+||+.||.+||++ .++++||||+.
T Consensus 269 li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~ 299 (373)
T 2r5t_A 269 LLEGLLQKDRTKRLGAKDDFMEIKSHVFFSL 299 (373)
T ss_dssp HHHHHTCSSGGGSTTTTTTHHHHHTSGGGTT
T ss_pred HHHHHcccCHHhCCCCCCCHHHHhCCccccC
Confidence 9999999999999987 69999999974
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-49 Score=382.21 Aligned_cols=259 Identities=28% Similarity=0.489 Sum_probs=224.2
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
...++|.+.+.||+|+||.||+|.+..+++.||+|++..... ...+.+.+|+.+++++. ||||+++++++...+.+
T Consensus 17 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~ 92 (297)
T 3fxz_A 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMRENK-NPNIVNYLDSYLVGDEL 92 (297)
T ss_dssp CGGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGC---SCHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEE
T ss_pred ChhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccc---cHHHHHHHHHHHHhcCC-CCCCCeEeEEEEECCEE
Confidence 355789999999999999999999999999999999865432 33567889999999998 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
++||||++|++|.+++... .+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.....
T Consensus 93 ~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~---~~~~~kl~Dfg~~~~~~~ 168 (297)
T 3fxz_A 93 WVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG---MDGSVKLTDFGFCAQITP 168 (297)
T ss_dssp EEEEECCTTCBHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTCEECCS
T ss_pred EEEEECCCCCCHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEC---CCCCEEEeeCCCceecCC
Confidence 9999999999999988764 699999999999999999999999999999999999994 567899999999987654
Q ss_pred CC-cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHH
Q 010013 224 GD-VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (520)
Q Consensus 224 ~~-~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (520)
.. ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+........ .....++..+.
T Consensus 169 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 247 (297)
T 3fxz_A 169 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL-QNPEKLSAIFR 247 (297)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCC-SCGGGSCHHHH
T ss_pred cccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC-CCccccCHHHH
Confidence 33 3345689999999999864 589999999999999999999999998887666655544333221 12357899999
Q ss_pred HHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 302 DIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 302 ~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
++|.+||+.||++|||+.++|+||||+...
T Consensus 248 ~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 277 (297)
T 3fxz_A 248 DFLNRCLEMDVEKRGSAKELLQHQFLKIAK 277 (297)
T ss_dssp HHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred HHHHHHccCChhHCcCHHHHhhChhhcccC
Confidence 999999999999999999999999998654
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-49 Score=390.06 Aligned_cols=267 Identities=36% Similarity=0.671 Sum_probs=213.4
Q ss_pred ccceeec---ceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 010013 66 RNTYIFG---RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (520)
Q Consensus 66 ~~~y~~~---~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~ 142 (520)
.++|.+. +.||+|+||.||+|.++.+++.||||++... ....+.+|+.+++.+.+||||+++++++.+...
T Consensus 7 ~~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~ 80 (325)
T 3kn6_A 7 YQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR------MEANTQKEITALKLCEGHPNIVKLHEVFHDQLH 80 (325)
T ss_dssp HHHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred hhccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCE
Confidence 4567664 7899999999999999999999999998542 346778999999999889999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
.|+||||++|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++..+....+||+|||++....
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 160 (325)
T 3kn6_A 81 TFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKP 160 (325)
T ss_dssp EEEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECC
T ss_pred EEEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecC
Confidence 99999999999999999998899999999999999999999999999999999999999765555579999999998764
Q ss_pred CCC-cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCC-------HHHHHHHHHcCCCCCCCCCC
Q 010013 223 PGD-VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGET-------EQSIFDAILRGHIDFSSDPW 293 (520)
Q Consensus 223 ~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~-------~~~~~~~~~~~~~~~~~~~~ 293 (520)
... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.. ..+....+..+...+....|
T Consensus 161 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 240 (325)
T 3kn6_A 161 PDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAW 240 (325)
T ss_dssp C----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHH
T ss_pred CCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccc
Confidence 332 3345678999999999864 58999999999999999999999997643 35677777777777666666
Q ss_pred CCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCCCCCCcc
Q 010013 294 PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338 (520)
Q Consensus 294 ~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~~~~~~~ 338 (520)
..+++.+.+||.+||..||++|||+.++++||||+.....+..+.
T Consensus 241 ~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~~~~~~~~ 285 (325)
T 3kn6_A 241 KNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPL 285 (325)
T ss_dssp HTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTCCCCCSCC
T ss_pred cCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccCccCCCCCC
Confidence 788999999999999999999999999999999987665555444
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-49 Score=395.39 Aligned_cols=257 Identities=28% Similarity=0.535 Sum_probs=227.7
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
..++|.+.+.||+|+||.||+|.++.+++.||+|++.+.........+.+.+|+.+++++. ||||+++++++.+.+.+|
T Consensus 13 ~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~~~~ 91 (384)
T 4fr4_A 13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLE-HPFLVNLWYSFQDEEDMF 91 (384)
T ss_dssp CGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEEeCCEEE
Confidence 3478999999999999999999999999999999997655444455678899999999998 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
+||||+.||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 92 lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll---~~~g~vkL~DFG~a~~~~~~ 168 (384)
T 4fr4_A 92 MVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILL---DEHGHVHITDFNIAAMLPRE 168 (384)
T ss_dssp EEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECCTT
T ss_pred EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEE---CCCCCEEEeccceeeeccCC
Confidence 999999999999999988899999999999999999999999999999999999999 45778999999999987666
Q ss_pred CcccccccCCCccCchhhc----ccCCCcchhHHHHHHHHHHhhCCCCCCCC---CHHHHHHHHHcCCCCCCCCCCCCCC
Q 010013 225 DVFKDLVGSAYYVAPEVLR----RNYGAEADIWSAGVILYILLSGVPPFWGE---TEQSIFDAILRGHIDFSSDPWPNIS 297 (520)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~----~~~~~~~Dv~slG~~l~~ll~g~~pf~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (520)
......+||+.|+|||++. ..++.++|||||||++|+|++|..||... ........+......++ ..++
T Consensus 169 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~p----~~~s 244 (384)
T 4fr4_A 169 TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYP----SAWS 244 (384)
T ss_dssp CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCCCC----TTSC
T ss_pred CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccCCC----CcCC
Confidence 6667788999999999985 24789999999999999999999999753 34555555555554443 3678
Q ss_pred HHHHHHHHHhcccCCCCCCC-HHHHHcCCcccc
Q 010013 298 SSAKDIVKKMLHADPKERLS-AAEVLNHPWMRV 329 (520)
Q Consensus 298 ~~~~~li~~~l~~dp~~Rps-~~~~l~~~~~~~ 329 (520)
..+.+||.+||..||++||+ +.++++||||..
T Consensus 245 ~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~ 277 (384)
T 4fr4_A 245 QEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMND 277 (384)
T ss_dssp HHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTT
T ss_pred HHHHHHHHHHhcCCHhHhcccHHHHHcChhhhc
Confidence 99999999999999999998 899999999974
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-49 Score=392.16 Aligned_cols=255 Identities=29% Similarity=0.591 Sum_probs=230.4
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
..++|.+.+.||+|+||.||+|.++.+|+.||+|++.+.........+.+.+|+.+++++. ||||+++++++.+...+|
T Consensus 39 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~ 117 (350)
T 1rdq_E 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLY 117 (350)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEE
T ss_pred CHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEEcCCEEE
Confidence 3478999999999999999999999999999999997654434445678899999999997 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
+||||++||+|.+++.+.+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.....
T Consensus 118 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~~kL~DFg~a~~~~~~ 194 (350)
T 1rdq_E 118 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGR 194 (350)
T ss_dssp EEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECSSC
T ss_pred EEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEE---CCCCCEEEcccccceeccCC
Confidence 999999999999999988899999999999999999999999999999999999999 45678999999999876433
Q ss_pred CcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHH
Q 010013 225 DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (520)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (520)
....+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+..+...++ ..++..+.++
T Consensus 195 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~l 268 (350)
T 1rdq_E 195 --TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDL 268 (350)
T ss_dssp --BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTCCHHHHHH
T ss_pred --cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHH
Confidence 345689999999999864 589999999999999999999999999999899999888766554 3679999999
Q ss_pred HHHhcccCCCCCCC-----HHHHHcCCcccc
Q 010013 304 VKKMLHADPKERLS-----AAEVLNHPWMRV 329 (520)
Q Consensus 304 i~~~l~~dp~~Rps-----~~~~l~~~~~~~ 329 (520)
|.+||+.||++||+ ++++++||||..
T Consensus 269 i~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~ 299 (350)
T 1rdq_E 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWFAT 299 (350)
T ss_dssp HHHHSCSCTTTCTTSSTTTTHHHHTSGGGTT
T ss_pred HHHHhhcCHHhccCCccCCHHHHHhCcCcCC
Confidence 99999999999998 999999999974
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-50 Score=397.60 Aligned_cols=257 Identities=34% Similarity=0.632 Sum_probs=222.3
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
..++|.+.+.||+|+||.||+|.+..+++.||+|++.............+.+|+.+++.++ ||||+++++++......+
T Consensus 7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~ 85 (336)
T 3h4j_B 7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR-HPHIIKLYDVITTPTDIV 85 (336)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEE
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCC-CCCCCeEEEEEEeCCEEE
Confidence 3478999999999999999999999999999999987543333334567899999999998 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
+||||+ +|+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 86 lv~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll---~~~~~~kl~DFG~s~~~~~~ 161 (336)
T 3h4j_B 86 MVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLL---DDNLNVKIADFGLSNIMTDG 161 (336)
T ss_dssp EEECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEE---CTTCCEEECCSSCTBTTTTS
T ss_pred EEEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEE---cCCCCEEEEEeccceeccCC
Confidence 999999 78999999988899999999999999999999999999999999999999 45678999999999887666
Q ss_pred CcccccccCCCccCchhhccc-C-CCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHH
Q 010013 225 DVFKDLVGSAYYVAPEVLRRN-Y-GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (520)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~~-~-~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (520)
......+||+.|+|||++.+. + +.++|||||||++|+|++|..||.+.........+......+ ...+++.+.+
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~----p~~~s~~~~~ 237 (336)
T 3h4j_B 162 NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVM----PDFLSPGAQS 237 (336)
T ss_dssp BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSSCCCC----CTTSCHHHHH
T ss_pred cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCC----cccCCHHHHH
Confidence 666677899999999998754 3 789999999999999999999998765443333332222222 2457899999
Q ss_pred HHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 303 IVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 303 li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
||.+||..||.+|||+.|+++||||+..
T Consensus 238 li~~~L~~dP~~Rpt~~eil~hp~~~~~ 265 (336)
T 3h4j_B 238 LIRRMIVADPMQRITIQEIRRDPWFNVN 265 (336)
T ss_dssp HHHTTSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred HHHHHcCCChhHCcCHHHHHhChhhccC
Confidence 9999999999999999999999999754
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-50 Score=386.23 Aligned_cols=247 Identities=21% Similarity=0.286 Sum_probs=190.7
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC----
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH---- 141 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~---- 141 (520)
.++|.+.+.||+|+||+||+|.+ +|+.||||++.... ......+.|+..+.+++ |||||++++++..++
T Consensus 2 ar~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~----~~~~~~e~Ei~~~~~l~-HpNIv~l~g~~~~~~~~~~ 74 (303)
T 3hmm_A 2 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE----ERSWFREAEIYQTVMLR-HENILGFIAADNKDNGTWT 74 (303)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGG----HHHHHHHHHHHTSTTCC-CTTBCCEEEEEEEECSSSE
T ss_pred CcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc----hhhHHHHHHHHHHhcCC-CCCCCcEEEEEEecCCCce
Confidence 45789999999999999999988 47899999986432 11122345666667787 999999999997653
Q ss_pred eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHc--------CCeeecCCCCcEEeecCCCCCCeeEe
Q 010013 142 SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM--------GVMHRDLKPENFLFSSSAEDSPLKAT 213 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~--------~ivH~Dlkp~NIll~~~~~~~~~kl~ 213 (520)
.+|||||||+||+|.+++... +++++.+.+++.|++.||.|||++ +||||||||+|||+ +.++.+||+
T Consensus 75 ~~~lV~Ey~~~gsL~~~l~~~-~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl---~~~~~~Ki~ 150 (303)
T 3hmm_A 75 QLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIA 150 (303)
T ss_dssp EEEEEEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEE---CTTSCEEEC
T ss_pred EEEEEecCCCCCcHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEE---CCCCCEEEE
Confidence 689999999999999999764 699999999999999999999987 99999999999999 567789999
Q ss_pred ecccccccCCCCc-----ccccccCCCccCchhhccc-------CCCcchhHHHHHHHHHHhhCCCCCCCC---------
Q 010013 214 DFGLSVFFKPGDV-----FKDLVGSAYYVAPEVLRRN-------YGAEADIWSAGVILYILLSGVPPFWGE--------- 272 (520)
Q Consensus 214 Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~-------~~~~~Dv~slG~~l~~ll~g~~pf~~~--------- 272 (520)
|||+|+....... ....+||+.|||||++.+. ++.++|||||||++|||+||.+||...
T Consensus 151 DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~ 230 (303)
T 3hmm_A 151 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 230 (303)
T ss_dssp CCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTT
T ss_pred eCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchh
Confidence 9999987644321 2235799999999998642 567899999999999999997665321
Q ss_pred ------CHHHHHHHHHcCCCCCCCC-CC--CCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 273 ------TEQSIFDAILRGHIDFSSD-PW--PNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 273 ------~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
........+.........+ .+ ...+..+.+|+.+||+.||++|||+.|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~ 290 (303)
T 3hmm_A 231 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290 (303)
T ss_dssp TSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred cccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence 1233444443333221111 11 123357889999999999999999999976
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-50 Score=401.79 Aligned_cols=261 Identities=30% Similarity=0.503 Sum_probs=227.4
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
..++|.+.+.||+|+||.||+|+++.+++.||+|++.+.........+.+.+|+.+++.+. ||||+++++++.+...+|
T Consensus 67 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~~~~ 145 (410)
T 3v8s_A 67 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN-SPWVVQLFYAFQDDRYLY 145 (410)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCC-CTTBCCEEEEEECSSEEE
T ss_pred CccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCC-CCCCCeEEEEEEECCEEE
Confidence 4578999999999999999999999999999999997543323333456789999999998 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
+||||++||+|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.....
T Consensus 146 lV~E~~~gg~L~~~l~~-~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl---~~~g~ikL~DFG~a~~~~~~ 221 (410)
T 3v8s_A 146 MVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKE 221 (410)
T ss_dssp EEECCCTTEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECCTT
T ss_pred EEEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeE---CCCCCEEEeccceeEeeccC
Confidence 99999999999998865 479999999999999999999999999999999999999 56778999999999876544
Q ss_pred Cc--ccccccCCCccCchhhccc-----CCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 010013 225 DV--FKDLVGSAYYVAPEVLRRN-----YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (520)
Q Consensus 225 ~~--~~~~~gt~~y~aPE~~~~~-----~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (520)
.. ....+||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.........+......+..+.+..++
T Consensus 222 ~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s 301 (410)
T 3v8s_A 222 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDIS 301 (410)
T ss_dssp SEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTTCCCC
T ss_pred CcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCCccccc
Confidence 32 2356899999999998632 6789999999999999999999999999988888887654333333345789
Q ss_pred HHHHHHHHHhcccCCCC--CCCHHHHHcCCccccC
Q 010013 298 SSAKDIVKKMLHADPKE--RLSAAEVLNHPWMRVD 330 (520)
Q Consensus 298 ~~~~~li~~~l~~dp~~--Rps~~~~l~~~~~~~~ 330 (520)
..+++||.+||..+|.+ ||+++|+++||||+..
T Consensus 302 ~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~ 336 (410)
T 3v8s_A 302 KEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 336 (410)
T ss_dssp HHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCS
T ss_pred HHHHHHHHHHccChhhhCCCCCHHHHhcCccccCC
Confidence 99999999999999988 9999999999999864
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-49 Score=387.18 Aligned_cols=276 Identities=30% Similarity=0.548 Sum_probs=238.9
Q ss_pred ccccCCcccccccceeec-ceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEE
Q 010013 55 GRVLGKPMEDVRNTYIFG-RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133 (520)
Q Consensus 55 ~~~~~~~~~~~~~~y~~~-~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l 133 (520)
........+.+.++|.+. +.||+|+||.||+|.++.+++.||+|++..... .......+.+|+.+++++..||||+++
T Consensus 16 ~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~iv~~ 94 (327)
T 3lm5_A 16 ENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRR-GQDCRAEILHEIAVLELAKSCPRVINL 94 (327)
T ss_dssp CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEET-TEECHHHHHHHHHHHHHTTTCTTBCCE
T ss_pred hhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhc-chHHHHHHHHHHHHHHhccCCCCEEEE
Confidence 334455667788999998 889999999999999999999999999875432 334567889999999999878999999
Q ss_pred EEEEEeCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCee
Q 010013 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLK 211 (520)
Q Consensus 134 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~k 211 (520)
++++......++||||+.|++|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||++....++.+|
T Consensus 95 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~k 174 (327)
T 3lm5_A 95 HEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIK 174 (327)
T ss_dssp EEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEE
T ss_pred EEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEE
Confidence 99999999999999999999999988553 6799999999999999999999999999999999999997544467899
Q ss_pred EeecccccccCCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCC
Q 010013 212 ATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSS 290 (520)
Q Consensus 212 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~ 290 (520)
|+|||++.............||+.|+|||++.+ .++.++||||||+++|+|++|..||.+.........+......++.
T Consensus 175 L~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~ 254 (327)
T 3lm5_A 175 IVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSE 254 (327)
T ss_dssp ECCGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT
T ss_pred EeeCccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCc
Confidence 999999998765555566789999999999864 5889999999999999999999999999988888888888777777
Q ss_pred CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 291 DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 291 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
..+..++..+.++|.+||..||++|||+.++|+||||+...
T Consensus 255 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~ 295 (327)
T 3lm5_A 255 ETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWD 295 (327)
T ss_dssp TTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCC
T ss_pred hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhcccc
Confidence 77788999999999999999999999999999999998653
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-49 Score=385.56 Aligned_cols=267 Identities=37% Similarity=0.642 Sum_probs=235.2
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCc---ccHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR---DDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~---~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~ 139 (520)
..+.++|.+++.||+|+||.||+|.++.+|+.||+|++........ ...+.+.+|+.+++++. ||||+++++++.+
T Consensus 8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~ 86 (321)
T 2a2a_A 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL-HHNVITLHDVYEN 86 (321)
T ss_dssp SCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCC-CTTBCCEEEEEEC
T ss_pred hhhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCC-CCCcceEEEEEec
Confidence 4466889999999999999999999999999999999876443221 23678999999999998 9999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCC-CCCeeEeecccc
Q 010013 140 RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAE-DSPLKATDFGLS 218 (520)
Q Consensus 140 ~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~-~~~~kl~Dfg~a 218 (520)
....++||||++|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+||+++.++. ...+||+|||++
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 87 RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp SSEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred CCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 9999999999999999999998888999999999999999999999999999999999999964221 127999999999
Q ss_pred cccCCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 010013 219 VFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (520)
Q Consensus 219 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (520)
.............||+.|+|||++.+ .++.++||||||+++|+|++|..||.+....+....+......++...+..++
T Consensus 167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 246 (321)
T 2a2a_A 167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTS 246 (321)
T ss_dssp EECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTCC
T ss_pred eecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhcccC
Confidence 88766555566789999999999864 58999999999999999999999999999888888888776665544446789
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 298 ~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
..+.++|.+||..||++|||+.++|+||||...
T Consensus 247 ~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~ 279 (321)
T 2a2a_A 247 ELAKDFIRKLLVKETRKRLTIQEALRHPWITPV 279 (321)
T ss_dssp HHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSCS
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHhcCccccCC
Confidence 999999999999999999999999999999743
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-49 Score=393.78 Aligned_cols=263 Identities=35% Similarity=0.695 Sum_probs=233.5
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccC-C----cccHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI-N----RDDVEDVRREVQIMHHLTGHRNIVELKGAY 137 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-~----~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~ 137 (520)
..+.++|.+.+.||+|+||.||+|.++.+|+.||||++...... . ....+.+.+|+.+++++.+||||+++++++
T Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 169 (365)
T 2y7j_A 90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY 169 (365)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence 34557899999999999999999999989999999998654311 1 112456889999999995599999999999
Q ss_pred EeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccc
Q 010013 138 EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (520)
Q Consensus 138 ~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~ 217 (520)
......++||||++|++|.+++.....+++..+..++.||+.||.|||+.||+||||||+||++ +.++.+||+|||+
T Consensus 170 ~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~---~~~~~ikl~DfG~ 246 (365)
T 2y7j_A 170 ESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILL---DDNMQIRLSDFGF 246 (365)
T ss_dssp EBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTT
T ss_pred eeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEEEecCc
Confidence 9999999999999999999999888889999999999999999999999999999999999999 4567899999999
Q ss_pred ccccCCCCcccccccCCCccCchhhcc-------cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCC
Q 010013 218 SVFFKPGDVFKDLVGSAYYVAPEVLRR-------NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSS 290 (520)
Q Consensus 218 a~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~ 290 (520)
+..+..........||+.|+|||++.+ .++.++|||||||++|+|++|..||...........+..+...+..
T Consensus 247 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~ 326 (365)
T 2y7j_A 247 SCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSS 326 (365)
T ss_dssp CEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCH
T ss_pred ccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCC
Confidence 988776666667789999999998853 3788999999999999999999999998888888888887776665
Q ss_pred CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccc
Q 010013 291 DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (520)
Q Consensus 291 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~ 328 (520)
..|..++..+.++|.+||..||++|||+.++|+||||+
T Consensus 327 ~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~ 364 (365)
T 2y7j_A 327 PEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE 364 (365)
T ss_dssp HHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGC
T ss_pred cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccC
Confidence 55678899999999999999999999999999999997
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-49 Score=383.37 Aligned_cols=264 Identities=36% Similarity=0.629 Sum_probs=221.2
Q ss_pred cccceeec-ceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 65 VRNTYIFG-RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 65 ~~~~y~~~-~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
+.++|.+. +.||+|+||.||+|.+..+++.||||++.... ....+.+.+|+.++.++.+||||+++++++.+.+.+
T Consensus 10 ~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~ 86 (316)
T 2ac3_A 10 FEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP---GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRF 86 (316)
T ss_dssp TTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS---SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEE
T ss_pred cceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc---chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEE
Confidence 45779985 78999999999999999999999999986542 234578899999999976699999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
++||||++|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++....+||+|||++.....
T Consensus 87 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 166 (316)
T 2ac3_A 87 YLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKL 166 (316)
T ss_dssp EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC----
T ss_pred EEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCcccccc
Confidence 99999999999999999888999999999999999999999999999999999999997544445699999999876532
Q ss_pred CC--------cccccccCCCccCchhhc------ccCCCcchhHHHHHHHHHHhhCCCCCCCCC---------------H
Q 010013 224 GD--------VFKDLVGSAYYVAPEVLR------RNYGAEADIWSAGVILYILLSGVPPFWGET---------------E 274 (520)
Q Consensus 224 ~~--------~~~~~~gt~~y~aPE~~~------~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~---------------~ 274 (520)
.. ......||+.|+|||++. ..++.++|||||||++|+|++|..||.+.. .
T Consensus 167 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 246 (316)
T 2ac3_A 167 NGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQ 246 (316)
T ss_dssp ---------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHH
T ss_pred CCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHH
Confidence 11 122346999999999985 347899999999999999999999997754 2
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 275 QSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
......+..+...++...+..++..+.+||.+||..||++|||+.++|+||||+...
T Consensus 247 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~ 303 (316)
T 2ac3_A 247 NMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCA 303 (316)
T ss_dssp HHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC---
T ss_pred HHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCC
Confidence 445666777766665544567899999999999999999999999999999998643
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-49 Score=404.01 Aligned_cols=259 Identities=35% Similarity=0.616 Sum_probs=232.1
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
...++|.+++.||+|+||.||+|.+..+|+.||||++...........+.+.+|+.+++.+. ||||+++++++...+.+
T Consensus 13 ~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~~~~~~~~~~ 91 (476)
T 2y94_A 13 VKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFR-HPHIIKLYQVISTPSDI 91 (476)
T ss_dssp CEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEE
T ss_pred ceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCEE
Confidence 34578999999999999999999999999999999997654333344678999999999998 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
++||||++|++|.+++.+.+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.....
T Consensus 92 ~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll---~~~~~vkL~DFG~a~~~~~ 168 (476)
T 2y94_A 92 FMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSD 168 (476)
T ss_dssp EEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEE---CTTCCEEECCCSSCEECCT
T ss_pred EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEE---ecCCCeEEEeccchhhccc
Confidence 9999999999999999888889999999999999999999999999999999999999 4567899999999998766
Q ss_pred CCcccccccCCCccCchhhccc--CCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHH
Q 010013 224 GDVFKDLVGSAYYVAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (520)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~~~--~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (520)
.......+||+.|+|||++.+. .+.++|||||||++|+|++|..||.+.........+..+....+ ..+++.+.
T Consensus 169 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~ 244 (476)
T 2y94_A 169 GEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTP----QYLNPSVI 244 (476)
T ss_dssp TCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCCCCC----TTCCHHHH
T ss_pred cccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCcCCC----ccCCHHHH
Confidence 6556677899999999998754 36799999999999999999999999888888888887765443 35789999
Q ss_pred HHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 302 DIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 302 ~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
+||.+||..||++|||+.++++||||+..
T Consensus 245 ~Li~~~L~~dP~~Rpt~~eil~hp~~~~~ 273 (476)
T 2y94_A 245 SLLKHMLQVDPMKRATIKDIREHEWFKQD 273 (476)
T ss_dssp HHHHHHTCSSTTTSCCHHHHHTCHHHHTT
T ss_pred HHHHHHcCCCchhCcCHHHHHhCHHhhhc
Confidence 99999999999999999999999999754
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-49 Score=403.51 Aligned_cols=257 Identities=31% Similarity=0.581 Sum_probs=219.3
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
..++|.+.+.||+|+||.||+|.++.+|+.||+|++.............+.+|+.+++++. ||||+++++++...+.++
T Consensus 146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~~~~~~~~~~ 224 (446)
T 4ejn_A 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR-HPFLTALKYSFQTHDRLC 224 (446)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCS-CTTSCCEEEEEEETTEEE
T ss_pred ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCC-CCeEeeEEEEEeeCCEEE
Confidence 3467999999999999999999999999999999997654444455667889999999998 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
+||||++|++|.+++...+.+++..+..++.||+.||.|||+ +||+||||||+|||++ .++.+||+|||+++....
T Consensus 225 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~---~~~~~kl~DFG~a~~~~~ 301 (446)
T 4ejn_A 225 FVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGIK 301 (446)
T ss_dssp EEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEEC---SSSCEEECCCCCCCTTCC
T ss_pred EEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEEC---CCCCEEEccCCCceeccC
Confidence 999999999999999988899999999999999999999998 9999999999999994 567899999999986432
Q ss_pred -CCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHH
Q 010013 224 -GDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (520)
Q Consensus 224 -~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (520)
.......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+......++ ..+++.+.
T Consensus 302 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~ 377 (446)
T 4ejn_A 302 DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP----RTLGPEAK 377 (446)
T ss_dssp -----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHH
T ss_pred CCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCC----ccCCHHHH
Confidence 334456789999999999864 589999999999999999999999999999888888887766554 36789999
Q ss_pred HHHHHhcccCCCCCC-----CHHHHHcCCcccc
Q 010013 302 DIVKKMLHADPKERL-----SAAEVLNHPWMRV 329 (520)
Q Consensus 302 ~li~~~l~~dp~~Rp-----s~~~~l~~~~~~~ 329 (520)
+||.+||..||++|| |+.++|+||||..
T Consensus 378 ~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~ 410 (446)
T 4ejn_A 378 SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG 410 (446)
T ss_dssp HHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred HHHHHHcccCHHHhCCCCCCCHHHHHhCccccC
Confidence 999999999999999 9999999999985
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-48 Score=378.53 Aligned_cols=265 Identities=26% Similarity=0.399 Sum_probs=216.5
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccC--CcccHHHHHHHHHHHHhcc--CCCCeeEEEEEEE
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI--NRDDVEDVRREVQIMHHLT--GHRNIVELKGAYE 138 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~~~e~~~l~~l~--~hp~iv~l~~~~~ 138 (520)
..+.++|.+.+.||+|+||+||+|.+..+++.||+|++...... .......+.+|+.+++++. .||||+++++++.
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~ 84 (308)
T 3g33_A 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCA 84 (308)
T ss_dssp -----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEE
T ss_pred cccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeee
Confidence 44568899999999999999999999999999999998643321 1122356677888877775 3999999999998
Q ss_pred eCC-----eEEEEEeccCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCee
Q 010013 139 DRH-----SVNLIMDLCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLK 211 (520)
Q Consensus 139 ~~~-----~~~lv~e~~~g~~L~~~l~~~~~--l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~k 211 (520)
... .+++||||+. ++|.+++..... +++..+..++.||+.||.|||++||+||||||+|||+ +.++.+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~---~~~~~~k 160 (308)
T 3g33_A 85 TSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV---TSGGTVK 160 (308)
T ss_dssp ECCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEE---CTTSCEE
T ss_pred ccCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---cCCCCEE
Confidence 765 5899999996 599999987654 9999999999999999999999999999999999999 4567899
Q ss_pred EeecccccccCCCCcccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCC
Q 010013 212 ATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSS 290 (520)
Q Consensus 212 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~ 290 (520)
|+|||++.............||+.|+|||++. ..++.++|||||||++|+|++|..||.+.........+.......+.
T Consensus 161 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 240 (308)
T 3g33_A 161 LADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 240 (308)
T ss_dssp ECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred EeeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 99999998876555556778999999999885 45899999999999999999999999999888777776543211111
Q ss_pred CC-----------------------CCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 291 DP-----------------------WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 291 ~~-----------------------~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
.. .+.+++.+.+||.+||+.||++|||+.|+|+||||+...
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~~ 304 (308)
T 3g33_A 241 DDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDE 304 (308)
T ss_dssp TTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC----
T ss_pred hhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCCC
Confidence 11 236789999999999999999999999999999998643
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-48 Score=377.80 Aligned_cols=265 Identities=41% Similarity=0.742 Sum_probs=233.9
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~ 142 (520)
..+.++|.+.+.||+|+||.||+|.+..+|+.||+|++..... ...+.+.+|+.+++++. ||||+++++++.+...
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~ 80 (304)
T 2jam_A 5 TNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA---FRDSSLENEIAVLKKIK-HENIVTLEDIYESTTH 80 (304)
T ss_dssp -CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC---------HHHHHHHHHHHCC-CTTBCCEEEEEECSSE
T ss_pred cchhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc---cchHHHHHHHHHHHhCC-CCCeeehhhhcccCCE
Confidence 4567889999999999999999999999999999999875332 23356889999999998 9999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
.++||||++|++|.+.+...+.+++..+..++.||+.||.|||++||+||||||+||++...+.++.+||+|||++....
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 160 (304)
T 2jam_A 81 YYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ 160 (304)
T ss_dssp EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCC
T ss_pred EEEEEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecC
Confidence 99999999999999999888899999999999999999999999999999999999999655567889999999987654
Q ss_pred CCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHH
Q 010013 223 PGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (520)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (520)
.. ......|++.|+|||++.+ .++.++||||||+++|+|++|..||...........+..+...++...+..++..+.
T Consensus 161 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 239 (304)
T 2jam_A 161 NG-IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAK 239 (304)
T ss_dssp CB-TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHHH
T ss_pred CC-ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHHHH
Confidence 32 2344578999999999864 488999999999999999999999999998888888888877777666778999999
Q ss_pred HHHHHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 302 DIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 302 ~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
++|.+||..||++|||+.++|+||||.....
T Consensus 240 ~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~ 270 (304)
T 2jam_A 240 DFICHLLEKDPNERYTCEKALSHPWIDGNTA 270 (304)
T ss_dssp HHHHHHHCSSTTTSCCHHHHHTSHHHHSSCS
T ss_pred HHHHHHcCCChhHCcCHHHHhcCccccCCCc
Confidence 9999999999999999999999999986543
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-49 Score=400.21 Aligned_cols=262 Identities=26% Similarity=0.499 Sum_probs=226.2
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
...++|.+.+.||+|+||+||+|.++.+++.||+|++.+.........+.+.+|..++..+. ||||+++++++.+.+.+
T Consensus 71 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~-hp~Iv~l~~~~~~~~~~ 149 (437)
T 4aw2_A 71 LHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGD-SKWITTLHYAFQDDNNL 149 (437)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSC-TTTBCCEEEEEECSSEE
T ss_pred CChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCC-CCCEEEEEEEEeeCCEE
Confidence 34578999999999999999999999999999999997543322233345889999999997 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 144 NLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
|+||||++||+|.+++.+ .+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++...
T Consensus 150 ~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl---~~~g~vkL~DFGla~~~~ 226 (437)
T 4aw2_A 150 YLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM---DMNGHIRLADFGSCLKLM 226 (437)
T ss_dssp EEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECC
T ss_pred EEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeE---cCCCCEEEcchhhhhhcc
Confidence 999999999999999987 5689999999999999999999999999999999999999 457789999999998765
Q ss_pred CCCc--ccccccCCCccCchhhc------ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCC--CCCCCCC
Q 010013 223 PGDV--FKDLVGSAYYVAPEVLR------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH--IDFSSDP 292 (520)
Q Consensus 223 ~~~~--~~~~~gt~~y~aPE~~~------~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~--~~~~~~~ 292 (520)
.... ....+||+.|+|||++. +.++.++|||||||++|+|++|+.||.+....+....+.... ..++. .
T Consensus 227 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~-~ 305 (437)
T 4aw2_A 227 EDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPT-Q 305 (437)
T ss_dssp TTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCS-S
T ss_pred cCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCc-c
Confidence 4332 23468999999999885 348899999999999999999999999999888888886543 22222 2
Q ss_pred CCCCCHHHHHHHHHhcccCCCC--CCCHHHHHcCCccccC
Q 010013 293 WPNISSSAKDIVKKMLHADPKE--RLSAAEVLNHPWMRVD 330 (520)
Q Consensus 293 ~~~~~~~~~~li~~~l~~dp~~--Rps~~~~l~~~~~~~~ 330 (520)
+..+++++++||.+||..+|++ ||+++|+++||||+..
T Consensus 306 ~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i 345 (437)
T 4aw2_A 306 VTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGI 345 (437)
T ss_dssp CCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTC
T ss_pred cccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCC
Confidence 3568999999999999888888 9999999999999753
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-48 Score=382.99 Aligned_cols=260 Identities=32% Similarity=0.530 Sum_probs=231.1
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
..++|.+++.||+|+||.||++.+..+++.+|+|++...........+.+.+|+.+++++. ||||+++++++.+.+..+
T Consensus 39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~ 117 (335)
T 2owb_A 39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFHGFFEDNDFVF 117 (335)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEE
T ss_pred cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEecCCeEE
Confidence 4578999999999999999999999999999999997665555566788999999999998 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
+||||+.+++|.+++...+.+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||++......
T Consensus 118 lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~---~~~~~kl~Dfg~~~~~~~~ 194 (335)
T 2owb_A 118 VVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN---EDLEVKIGDFGLATKVEYD 194 (335)
T ss_dssp EEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC---TTCCEEECCCTTCEECCST
T ss_pred EEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEc---CCCCEEEeeccCceecccC
Confidence 9999999999999998888999999999999999999999999999999999999994 5677999999999876432
Q ss_pred -CcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHH
Q 010013 225 -DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (520)
Q Consensus 225 -~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (520)
.......||+.|+|||++.+ .++.++||||||+++|+|++|..||......+....+......++ ..++..+.+
T Consensus 195 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 270 (335)
T 2owb_A 195 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP----KHINPVAAS 270 (335)
T ss_dssp TCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCC----TTSCHHHHH
T ss_pred cccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCCCCC----ccCCHHHHH
Confidence 23345679999999999865 488899999999999999999999999888877777777655443 367899999
Q ss_pred HHHHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 303 IVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 303 li~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
+|.+||+.||++|||+.++|+||||.....
T Consensus 271 li~~~l~~dp~~Rps~~ell~~~~~~~~~~ 300 (335)
T 2owb_A 271 LIQKMLQTDPTARPTINELLNDEFFTSGYI 300 (335)
T ss_dssp HHHHHTCSSGGGSCCGGGGGGSHHHHTSCC
T ss_pred HHHHHccCChhHCcCHHHHhcCccccCCCc
Confidence 999999999999999999999999976543
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-48 Score=376.75 Aligned_cols=266 Identities=41% Similarity=0.736 Sum_probs=239.4
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~ 142 (520)
..+.++|.+.+.||+|+||.||+|.+..+++.||+|++..... .....+.+.+|+.+++++. ||||+++++++.....
T Consensus 18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~ 95 (287)
T 2wei_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA-KNKDTSTILREVELLKKLD-HPNIMKLFEILEDSSS 95 (287)
T ss_dssp HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGB-SSSCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSE
T ss_pred HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEeccccc-chHHHHHHHHHHHHHHhcc-CCCccEEEEEEeCCCe
Confidence 4466889999999999999999999999999999999865433 2345678999999999997 9999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
.++||||+++++|.+.+...+.+++..+..++.||+.||.|||++|++||||||+||+++..+.+..+||+|||++....
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~ 175 (287)
T 2wei_A 96 FYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (287)
T ss_dssp EEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBC
T ss_pred EEEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeec
Confidence 99999999999999999888899999999999999999999999999999999999999765556689999999998776
Q ss_pred CCCcccccccCCCccCchhhcccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHH
Q 010013 223 PGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (520)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (520)
.........|++.|+|||++.+.++.++||||||+++|+|++|..||.+.........+..+...+....+..++..+.+
T Consensus 176 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (287)
T 2wei_A 176 QNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKD 255 (287)
T ss_dssp CCSSCSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCHHHHH
T ss_pred CCCccccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCHHHHH
Confidence 55444555789999999999888999999999999999999999999999988888888888776666666788999999
Q ss_pred HHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 303 IVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 303 li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
+|.+||..||++|||+.++|+||||+..
T Consensus 256 li~~~l~~dp~~Rps~~ell~hp~~~~~ 283 (287)
T 2wei_A 256 LIRKMLTFHPSLRITATQCLEHPWIQKY 283 (287)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred HHHHHcccChhhCcCHHHHhcCHHHhcc
Confidence 9999999999999999999999999754
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-48 Score=378.58 Aligned_cols=262 Identities=27% Similarity=0.448 Sum_probs=214.4
Q ss_pred ccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 010013 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (520)
Q Consensus 62 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~ 141 (520)
.+.+.++|.+.+.||+|+||+||+|.+.. ++.||+|++..... .....+.+.+|+.++++++ ||||+++++++.+..
T Consensus 16 ~q~l~~~y~~~~~lG~G~~g~V~~~~~~~-~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~ 92 (311)
T 3niz_A 16 FQGLMEKYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAE-DEGIPSTAIREISLLKELH-HPNIVSLIDVIHSER 92 (311)
T ss_dssp EECSSCEEEEEEEEEECSSCEEEEEEETT-SCEEEEEEEC-------CHHHHHHHHHHHHHHCC-CTTBCCEEEEECCSS
T ss_pred ecchHhhhHhhhhccCCCCeEEEEEEECC-CCEEEEEEEecccc-cchhhHHHHHHHHHHHHcC-CCCEeeeeeEEccCC
Confidence 44567889999999999999999999964 89999999865432 2334567889999999998 999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccc
Q 010013 142 SVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 220 (520)
..++||||+++ +|.+.+... ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..
T Consensus 93 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~---~~~~~kl~Dfg~a~~ 168 (311)
T 3niz_A 93 CLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLIN---SDGALKLADFGLARA 168 (311)
T ss_dssp CEEEEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCTTCEE
T ss_pred EEEEEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEEC---CCCCEEEccCcCcee
Confidence 99999999975 788877664 4599999999999999999999999999999999999994 567899999999987
Q ss_pred cCCC-CcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCC------
Q 010013 221 FKPG-DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD------ 291 (520)
Q Consensus 221 ~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~------ 291 (520)
.... .......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+..........
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 248 (311)
T 3niz_A 169 FGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQ 248 (311)
T ss_dssp TTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGT
T ss_pred cCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhh
Confidence 6432 23345678999999998854 48999999999999999999999998877655555543311111100
Q ss_pred --------------------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 292 --------------------PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 292 --------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
..+.+++++.+||.+||+.||++|||+.|+|+||||+..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 307 (311)
T 3niz_A 249 ELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL 307 (311)
T ss_dssp TSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTS
T ss_pred ccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccC
Confidence 123567899999999999999999999999999999854
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-48 Score=374.07 Aligned_cols=258 Identities=26% Similarity=0.493 Sum_probs=214.5
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+.+.||+|+||+||+|.++.+++.||+|++..... .....+.+.+|+.++++++ ||||+++++++.+++.+++|
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 79 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELK-HKNIVRLHDVLHSDKKLTLV 79 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS-STTHHHHHHHHHHHHTTCC-CTTBCCEEEEEEETTEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCC-cCCcchHHHHHHHHHhcCC-CCCEeeEEeEEEeCCEEEEE
Confidence 579999999999999999999999999999999975442 3344577889999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC-
Q 010013 147 MDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG- 224 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~- 224 (520)
|||+.+ +|.+.+.. .+.+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 80 ~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~---~~~~~kl~Dfg~~~~~~~~~ 155 (292)
T 3o0g_A 80 FEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLIN---RNGELKLANFGLARAFGIPV 155 (292)
T ss_dssp EECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTCEECCSCC
T ss_pred EecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEeecccceecCCcc
Confidence 999976 55555544 67899999999999999999999999999999999999994 5678999999999876432
Q ss_pred CcccccccCCCccCchhhcc-c-CCCcchhHHHHHHHHHHhhCCCC-CCCCCHHHHHHHHHcCCCCCCC-----------
Q 010013 225 DVFKDLVGSAYYVAPEVLRR-N-YGAEADIWSAGVILYILLSGVPP-FWGETEQSIFDAILRGHIDFSS----------- 290 (520)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~-~-~~~~~Dv~slG~~l~~ll~g~~p-f~~~~~~~~~~~~~~~~~~~~~----------- 290 (520)
.......||+.|+|||++.+ . ++.++|||||||++|+|++|..| |.+.........+.........
T Consensus 156 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 235 (292)
T 3o0g_A 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235 (292)
T ss_dssp SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTT
T ss_pred ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccc
Confidence 23345678999999998854 3 79999999999999999988777 5555555555555432111110
Q ss_pred --------------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 291 --------------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 291 --------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
...+.++..+.+||.+||+.||++|||++|+|+||||+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 289 (292)
T 3o0g_A 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 289 (292)
T ss_dssp CCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC
T ss_pred ccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcccccC
Confidence 1123578999999999999999999999999999999753
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-48 Score=379.82 Aligned_cols=256 Identities=32% Similarity=0.581 Sum_probs=215.4
Q ss_pred ccceeecceeeccCCeEEEEEEEc---CCCcEEEEEEecccccC-CcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHK---DTKQQFACKSISSRKLI-NRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~~avK~~~~~~~~-~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~ 141 (520)
.++|.+.+.||+|+||.||+|.+. .+++.||+|++.+.... .......+.+|+.+++++. ||||+++++++...+
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~ 94 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK-HPFIVDLIYAFQTGG 94 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCC-CTTBCCEEEEEECSS
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCC-CCCccceeEEEEcCC
Confidence 467999999999999999999985 67899999999764332 2233466789999999998 999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 142 SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
.+|+||||++|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++...
T Consensus 95 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~---~~~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 95 KLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLN---HQGHVKLTDFGLCKES 171 (327)
T ss_dssp CEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEEC---TTSCEEECCCSCC---
T ss_pred EEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEEC---CCCcEEEEeCCccccc
Confidence 9999999999999999999888999999999999999999999999999999999999994 5678999999999864
Q ss_pred CC-CCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHH
Q 010013 222 KP-GDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (520)
Q Consensus 222 ~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (520)
.. ........||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+......++ +.++..
T Consensus 172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~p----~~~~~~ 247 (327)
T 3a62_A 172 IHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP----PYLTQE 247 (327)
T ss_dssp -------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCC----TTSCHH
T ss_pred ccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCC----CCCCHH
Confidence 32 223345679999999999864 589999999999999999999999999998888888887765544 367899
Q ss_pred HHHHHHHhcccCCCCCC-----CHHHHHcCCcccc
Q 010013 300 AKDIVKKMLHADPKERL-----SAAEVLNHPWMRV 329 (520)
Q Consensus 300 ~~~li~~~l~~dp~~Rp-----s~~~~l~~~~~~~ 329 (520)
+.++|.+||..||++|| ++.++++||||+.
T Consensus 248 ~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~ 282 (327)
T 3a62_A 248 ARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRH 282 (327)
T ss_dssp HHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSS
T ss_pred HHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccC
Confidence 99999999999999999 8999999999974
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-48 Score=383.67 Aligned_cols=263 Identities=30% Similarity=0.480 Sum_probs=213.0
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
..++|.+.+.||+|+||.||+|.+..+++.||+|++..... .....+.+.+|+.++++++ ||||+++++++.+.+.++
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE-EEGVPGTAIREVSLLKELQ-HRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC---------CHHHHHHGGGCC-CTTBCCEEEEEEETTEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEccccc-ccccchhHHHHHHHHHHcC-CCCcceEEEEEecCCEEE
Confidence 45689999999999999999999999999999999865432 2233456789999999998 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCC--CCCCeeEeecccccccC
Q 010013 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA--EDSPLKATDFGLSVFFK 222 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~--~~~~~kl~Dfg~a~~~~ 222 (520)
+||||+.| +|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++ ....+||+|||++....
T Consensus 110 lv~e~~~~-~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~ 188 (329)
T 3gbz_A 110 LIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG 188 (329)
T ss_dssp EEEECCSE-EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC
T ss_pred EEEecCCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccC
Confidence 99999975 9999999988999999999999999999999999999999999999996432 34569999999998764
Q ss_pred CC-CcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCC-----
Q 010013 223 PG-DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP----- 294 (520)
Q Consensus 223 ~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~----- 294 (520)
.. .......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+...........|+
T Consensus 189 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (329)
T 3gbz_A 189 IPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTAL 268 (329)
T ss_dssp -----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGS
T ss_pred CcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhh
Confidence 32 23345578999999999864 47999999999999999999999999988877766665432111111111
Q ss_pred ---------------------CCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 295 ---------------------NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 295 ---------------------~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
.++..+.+||.+||+.||++|||+.|+|+||||+..
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 325 (329)
T 3gbz_A 269 PDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHN 325 (329)
T ss_dssp TTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSS
T ss_pred hhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCC
Confidence 167899999999999999999999999999999854
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-48 Score=374.18 Aligned_cols=265 Identities=36% Similarity=0.660 Sum_probs=235.4
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCC------cccHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN------RDDVEDVRREVQIMHHLTGHRNIVELKGAY 137 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~------~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~ 137 (520)
.+.++|.+.+.||+|+||.||+|.++.+++.||+|++....... ....+.+.+|+.+++++.+||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 35578999999999999999999999999999999986543111 122466889999999997799999999999
Q ss_pred EeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccc
Q 010013 138 EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (520)
Q Consensus 138 ~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~ 217 (520)
......++||||+++++|.+++.....+++..+..++.||+.||.|||++|++||||||+||++ +.++.+||+|||+
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~dfg~ 170 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL---DDDMNIKLTDFGF 170 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTT
T ss_pred ccCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEE---cCCCcEEEecccc
Confidence 9999999999999999999999988889999999999999999999999999999999999999 4567799999999
Q ss_pred ccccCCCCcccccccCCCccCchhhc-------ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCC
Q 010013 218 SVFFKPGDVFKDLVGSAYYVAPEVLR-------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSS 290 (520)
Q Consensus 218 a~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~ 290 (520)
+.............|++.|+|||++. ..++.++||||||+++|+|++|..||...........+..+...+..
T Consensus 171 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 250 (298)
T 1phk_A 171 SCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGS 250 (298)
T ss_dssp CEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT
T ss_pred hhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCc
Confidence 98876665556678999999999874 24788999999999999999999999999888888888888777776
Q ss_pred CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 291 DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 291 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
..+..++..+.++|.+||+.||++|||+.++|+||||+...
T Consensus 251 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 291 (298)
T 1phk_A 251 PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV 291 (298)
T ss_dssp TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC
T ss_pred ccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhcc
Confidence 66678999999999999999999999999999999998543
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-49 Score=394.57 Aligned_cols=262 Identities=25% Similarity=0.464 Sum_probs=224.1
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
...++|.+.+.||+|+||.||+|+++.+|+.||+|++.+.........+.+.+|..++..+. ||||+++++++.+.+.+
T Consensus 58 ~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~-hp~Iv~l~~~~~~~~~~ 136 (412)
T 2vd5_A 58 LQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGD-RRWITQLHFAFQDENYL 136 (412)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSC-TTTBCCEEEEEECSSEE
T ss_pred CChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcC-CCCeeeEEEEEeeCCEE
Confidence 34578999999999999999999999999999999997543333334456889999999998 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 144 NLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
|+||||++||+|.+++.+. ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++++||+|||+++...
T Consensus 137 ~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl---d~~g~vkL~DFGla~~~~ 213 (412)
T 2vd5_A 137 YLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILL---DRCGHIRLADFGSCLKLR 213 (412)
T ss_dssp EEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECC
T ss_pred EEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeee---cCCCCEEEeechhheecc
Confidence 9999999999999999875 479999999999999999999999999999999999999 457789999999998765
Q ss_pred CCCc--ccccccCCCccCchhhc--------ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCC-
Q 010013 223 PGDV--FKDLVGSAYYVAPEVLR--------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD- 291 (520)
Q Consensus 223 ~~~~--~~~~~gt~~y~aPE~~~--------~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~- 291 (520)
.... ....+||+.|+|||++. +.++.++|||||||++|+|++|..||.+....+....+......+..+
T Consensus 214 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~ 293 (412)
T 2vd5_A 214 ADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPL 293 (412)
T ss_dssp TTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC-
T ss_pred CCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCc
Confidence 4432 23468999999999885 348899999999999999999999999999888888776533211111
Q ss_pred CCCCCCHHHHHHHHHhcccCCCCC---CCHHHHHcCCccccC
Q 010013 292 PWPNISSSAKDIVKKMLHADPKER---LSAAEVLNHPWMRVD 330 (520)
Q Consensus 292 ~~~~~~~~~~~li~~~l~~dp~~R---ps~~~~l~~~~~~~~ 330 (520)
....+++++++||.+||. +|.+| |+++++++||||+..
T Consensus 294 ~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i 334 (412)
T 2vd5_A 294 VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGL 334 (412)
T ss_dssp ---CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTC
T ss_pred cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCC
Confidence 124789999999999999 99998 599999999999753
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-48 Score=376.68 Aligned_cols=256 Identities=31% Similarity=0.608 Sum_probs=216.4
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCC-----------------------cccHHHHHHHHHHHH
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN-----------------------RDDVEDVRREVQIMH 122 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-----------------------~~~~~~~~~e~~~l~ 122 (520)
.++|.+.+.||+|+||.||+|.+..+++.||+|++....... ....+.+.+|+.+++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 467999999999999999999999999999999987543221 112456889999999
Q ss_pred hccCCCCeeEEEEEEEe--CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEE
Q 010013 123 HLTGHRNIVELKGAYED--RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFL 200 (520)
Q Consensus 123 ~l~~hp~iv~l~~~~~~--~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl 200 (520)
++. ||||+++++++.+ ...+++||||+++++|.+.+ ..+.+++..+..++.||+.||.|||++||+||||||+|||
T Consensus 92 ~l~-h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil 169 (298)
T 2zv2_A 92 KLD-HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP-TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLL 169 (298)
T ss_dssp TCC-CTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS-CSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEE
T ss_pred hCC-CCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEE
Confidence 998 9999999999986 67899999999999998754 4457999999999999999999999999999999999999
Q ss_pred eecCCCCCCeeEeecccccccCCCC-cccccccCCCccCchhhccc----CCCcchhHHHHHHHHHHhhCCCCCCCCCHH
Q 010013 201 FSSSAEDSPLKATDFGLSVFFKPGD-VFKDLVGSAYYVAPEVLRRN----YGAEADIWSAGVILYILLSGVPPFWGETEQ 275 (520)
Q Consensus 201 l~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~----~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~ 275 (520)
+ +.++.+||+|||++....... ......||+.|+|||++.+. ++.++|||||||++|+|++|..||.+....
T Consensus 170 ~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~ 246 (298)
T 2zv2_A 170 V---GEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIM 246 (298)
T ss_dssp E---CTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred E---CCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHH
Confidence 9 456789999999998765433 33456799999999998643 367899999999999999999999998887
Q ss_pred HHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccc
Q 010013 276 SIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (520)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~ 328 (520)
.....+......++. .+.+++.+.++|.+||+.||++|||+.|+|+||||+
T Consensus 247 ~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~ 297 (298)
T 2zv2_A 247 CLHSKIKSQALEFPD--QPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT 297 (298)
T ss_dssp HHHHHHHHCCCCCCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred HHHHHHhcccCCCCC--ccccCHHHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence 777777766554443 357899999999999999999999999999999996
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-48 Score=372.01 Aligned_cols=259 Identities=33% Similarity=0.614 Sum_probs=225.7
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
..++|.+.+.||+|+||.||+|.+..++..||+|++.............+.+|+.+++++. ||||+++++++.+....+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 85 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVY 85 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCC-CCCCcchhheEecCCEEE
Confidence 4578999999999999999999999999999999986544333344567899999999998 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
+||||+++++|.+.+.....+++..+..++.||+.||.|||+.||+||||||+||++ +.++.++|+|||++......
T Consensus 86 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili---~~~~~~~l~Dfg~~~~~~~~ 162 (279)
T 3fdn_A 86 LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL---GSAGELKIADFGWSVHAPSS 162 (279)
T ss_dssp EEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEE---CTTSCEEECSCCEESCC---
T ss_pred EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEE---cCCCCEEEEeccccccCCcc
Confidence 999999999999999988899999999999999999999999999999999999999 45678999999998765432
Q ss_pred CcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHH
Q 010013 225 DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (520)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (520)
......|++.|+|||++.+ .++.++||||||+++|+|++|..||...........+......++ ..++..+.+|
T Consensus 163 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l 237 (279)
T 3fdn_A 163 -RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDL 237 (279)
T ss_dssp ------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCC----TTSCHHHHHH
T ss_pred -cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCCCC----CcCCHHHHHH
Confidence 2345678999999999865 478899999999999999999999999998888888877665544 3578999999
Q ss_pred HHHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 304 VKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 304 i~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
|.+||+.||++|||+.++|+||||+....
T Consensus 238 i~~~l~~~p~~Rps~~e~l~h~~~~~~~~ 266 (279)
T 3fdn_A 238 ISRLLKHNPSQRPMLREVLEHPWITANSS 266 (279)
T ss_dssp HHHHCCSSGGGSCCHHHHHHCHHHHHHCS
T ss_pred HHHHhccChhhCCCHHHHhhCccccCCcc
Confidence 99999999999999999999999986543
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-49 Score=397.18 Aligned_cols=264 Identities=38% Similarity=0.681 Sum_probs=218.5
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCC-----cccHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN-----RDDVEDVRREVQIMHHLTGHRNIVELKGAYE 138 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-----~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~ 138 (520)
.+.++|.+.+.||+|+||.||+|.++.+++.||+|++.+..... ......+.+|+.+|+++. ||||+++++++.
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~ 210 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLN-HPCIIKIKNFFD 210 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCC-CTTBCCCCEEEE
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCC-CCCEeeEEEEEe
Confidence 45688999999999999999999999999999999997654321 112235789999999998 999999999985
Q ss_pred eCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccc
Q 010013 139 DRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218 (520)
Q Consensus 139 ~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a 218 (520)
.+..++||||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++..+.+..+||+|||++
T Consensus 211 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a 289 (419)
T 3i6u_A 211 -AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 289 (419)
T ss_dssp -SSEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTT
T ss_pred -cCceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccc
Confidence 4568999999999999999988889999999999999999999999999999999999999976666678999999999
Q ss_pred cccCCCCcccccccCCCccCchhhc----ccCCCcchhHHHHHHHHHHhhCCCCCCCCCH-HHHHHHHHcCCCCCCCCCC
Q 010013 219 VFFKPGDVFKDLVGSAYYVAPEVLR----RNYGAEADIWSAGVILYILLSGVPPFWGETE-QSIFDAILRGHIDFSSDPW 293 (520)
Q Consensus 219 ~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~ 293 (520)
+............||+.|+|||++. ..++.++|||||||++|+|++|..||..... ......+..+...+....+
T Consensus 290 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~ 369 (419)
T 3i6u_A 290 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 369 (419)
T ss_dssp TSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHH
T ss_pred eecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhh
Confidence 9876555556678999999999874 3477899999999999999999999976543 3345556666655555455
Q ss_pred CCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcccc
Q 010013 294 PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 294 ~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
..++..+.+||.+||+.||++|||+.++|+||||+.
T Consensus 370 ~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~ 405 (419)
T 3i6u_A 370 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 405 (419)
T ss_dssp TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred cccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCC
Confidence 678999999999999999999999999999999973
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-48 Score=400.03 Aligned_cols=261 Identities=26% Similarity=0.428 Sum_probs=199.7
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe----
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED---- 139 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~---- 139 (520)
.+.++|.+++.||+|+||.||+|.++.+++.||||++... .......+.+.+|+.+|++++ ||||+++++++..
T Consensus 50 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~-~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~ 127 (458)
T 3rp9_A 50 QIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRV-FEDLIDCKRILREIAILNRLN-HDHVVKVLDIVIPKDVE 127 (458)
T ss_dssp CSCTTEEECCC-------CEEEEEECC--CEEEEEEECST-TSSHHHHHHHHHHHHHHHHCC-CTTBCCEEEECCCSCTT
T ss_pred ccCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechh-hcCHHHHHHHHHHHHHHHhCC-CCCCCceEEEEecCCcc
Confidence 4568899999999999999999999999999999998643 334445678899999999998 9999999999843
Q ss_pred -CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccc
Q 010013 140 -RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218 (520)
Q Consensus 140 -~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a 218 (520)
...+|+||||+ +++|.+++.....+++..+..++.||+.||.|||+.||+||||||+|||+ +.++.+||+|||++
T Consensus 128 ~~~~~~lv~e~~-~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl---~~~~~~kl~DFGla 203 (458)
T 3rp9_A 128 KFDELYVVLEIA-DSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLV---NQDCSVKVCDFGLA 203 (458)
T ss_dssp TCCCEEEEECCC-SEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTCCEEECCCTTC
T ss_pred cCceEEEEEecc-ccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEE---CCCCCEeecccccc
Confidence 36799999998 57999999888889999999999999999999999999999999999999 45678999999999
Q ss_pred cccCCCC----------------------------cccccccCCCccCchhh-c-ccCCCcchhHHHHHHHHHHhh----
Q 010013 219 VFFKPGD----------------------------VFKDLVGSAYYVAPEVL-R-RNYGAEADIWSAGVILYILLS---- 264 (520)
Q Consensus 219 ~~~~~~~----------------------------~~~~~~gt~~y~aPE~~-~-~~~~~~~Dv~slG~~l~~ll~---- 264 (520)
+...... .....+||+.|+|||++ . ..++.++|||||||++|+|++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~ 283 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKE 283 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTT
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccc
Confidence 8764221 23445789999999976 3 459999999999999999998
Q ss_pred -------CCCCCCCCCH--------------------HHHHHHHHc-----------------------CCCC----CCC
Q 010013 265 -------GVPPFWGETE--------------------QSIFDAILR-----------------------GHID----FSS 290 (520)
Q Consensus 265 -------g~~pf~~~~~--------------------~~~~~~~~~-----------------------~~~~----~~~ 290 (520)
|.++|.+... ...+..+.. .... ...
T Consensus 284 ~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (458)
T 3rp9_A 284 NVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLA 363 (458)
T ss_dssp TCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGG
T ss_pred cccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHH
Confidence 6777766431 111111110 0000 001
Q ss_pred CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 291 DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 291 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
..++.+++.+.+||.+||..||++|||++|+|+||||+..
T Consensus 364 ~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~ 403 (458)
T 3rp9_A 364 ERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEV 403 (458)
T ss_dssp GGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred HHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhc
Confidence 1245679999999999999999999999999999999864
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-48 Score=372.83 Aligned_cols=265 Identities=38% Similarity=0.693 Sum_probs=229.0
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCc---ccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR---DDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~---~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~ 141 (520)
+.++|.+.+.||+|+||.||+|.+..+++.||+|++........ ...+.+.+|+.+++++. ||||+++++++.+..
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~ 81 (283)
T 3bhy_A 3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR-HPNIITLHDIFENKT 81 (283)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCC-CTTBCCEEEEEECSS
T ss_pred hhhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCC-CCCeeehhheecCCC
Confidence 34679999999999999999999999999999999876543221 24678999999999998 999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCC-CCCCeeEeecccccc
Q 010013 142 SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA-EDSPLKATDFGLSVF 220 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~-~~~~~kl~Dfg~a~~ 220 (520)
..++||||+++++|.+++.....+++..+..++.||+.||.|||++|++||||||+||+++.++ ....+||+|||.+..
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~ 161 (283)
T 3bhy_A 82 DVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 161 (283)
T ss_dssp EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred eEEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEeccccee
Confidence 9999999999999999998888899999999999999999999999999999999999996432 233799999999988
Q ss_pred cCCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHH
Q 010013 221 FKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (520)
Q Consensus 221 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (520)
...........|++.|+|||++.+ .++.++||||||+++|+|++|..||.+.........+......++...+..++..
T Consensus 162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (283)
T 3bhy_A 162 IEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSEL 241 (283)
T ss_dssp CC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTTCCHH
T ss_pred ccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhcccCCHH
Confidence 765555556679999999999864 5889999999999999999999999999988888888777665554445678999
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 300 AKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 300 ~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
+.++|.+||..||++|||+.++|+||||+..
T Consensus 242 ~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 272 (283)
T 3bhy_A 242 AKDFIRRLLVKDPKRRMTIAQSLEHSWIKAI 272 (283)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHHHCHHHHHH
T ss_pred HHHHHHHHccCCHhHCcCHHHHHhCHHHHHH
Confidence 9999999999999999999999999999753
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-48 Score=380.46 Aligned_cols=259 Identities=29% Similarity=0.569 Sum_probs=217.4
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
+.++|.+.+.||+|+||.||+|.++.+++.||+|++..... ....+.+.+|+.+++.+. ||||+++++++.+.+..+
T Consensus 5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~~ 81 (323)
T 3tki_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLN-HENVVKFYGHRREGNIQY 81 (323)
T ss_dssp TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHHCC-CTTBCCEEEEEECSSEEE
T ss_pred HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc--cchHHHHHHHHHHHHhCC-CCCCCeEEEEEecCCeEE
Confidence 45789999999999999999999999999999999864432 223366889999999998 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
+||||++|++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll---~~~~~~kl~Dfg~a~~~~~~ 158 (323)
T 3tki_A 82 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYN 158 (323)
T ss_dssp EEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTTCEECEET
T ss_pred EEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEE---eCCCCEEEEEeeccceeccC
Confidence 999999999999999888889999999999999999999999999999999999999 45678999999999865322
Q ss_pred C---cccccccCCCccCchhhccc--CCCcchhHHHHHHHHHHhhCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCCCCH
Q 010013 225 D---VFKDLVGSAYYVAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQ-SIFDAILRGHIDFSSDPWPNISS 298 (520)
Q Consensus 225 ~---~~~~~~gt~~y~aPE~~~~~--~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 298 (520)
. ......||+.|+|||++.+. ++.++|||||||++|+|++|..||...... ........... ....+..++.
T Consensus 159 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 236 (323)
T 3tki_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT--YLNPWKKIDS 236 (323)
T ss_dssp TEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCT--TSTTGGGSCH
T ss_pred CcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccc--cCCccccCCH
Confidence 2 23456899999999998643 467899999999999999999999876543 22222332222 2223567899
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 299 ~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
.+.+||.+||..||++|||+.|+|+||||+...
T Consensus 237 ~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~ 269 (323)
T 3tki_A 237 APLALLHKILVENPSARITIPDIKKDRWYNKPL 269 (323)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred HHHHHHHHHccCChhhCcCHHHHhhChhhcccc
Confidence 999999999999999999999999999998643
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-48 Score=371.70 Aligned_cols=256 Identities=29% Similarity=0.486 Sum_probs=212.1
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+.+.||+|+||.||+|.+ .+++.||+|++..... .....+.+.+|+.+++++. ||||+++++++...+..++|
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 78 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKE-DEGIPSTTIREISILKELK-HSNIVKLYDVIHTKKRLVLV 78 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSG-GGCCCHHHHHHHHGGGGCC-CTTBCCEEEEEECSSCEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEecccc-ccccchhHHHHHHHHHhcC-CCCEeeeeeEEccCCeEEEE
Confidence 5799999999999999999998 5689999999865432 2233467889999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC-
Q 010013 147 MDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG- 224 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~- 224 (520)
|||+.+ +|.+.+... +.+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++......
T Consensus 79 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 79 FEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI---NREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp EECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECCTTHHHHHCC--
T ss_pred EEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCCEEEeECccccccCccc
Confidence 999976 898888764 679999999999999999999999999999999999999 45678999999999876432
Q ss_pred CcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCC------------
Q 010013 225 DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSS------------ 290 (520)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~------------ 290 (520)
.......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+.........
T Consensus 155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T 1ob3_A 155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY 234 (288)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccc
Confidence 23344578999999999854 4899999999999999999999999998877666655431100000
Q ss_pred -------------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcccc
Q 010013 291 -------------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 291 -------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
.....+++.+.+||.+||+.||++|||+.|+|+||||+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~ 286 (288)
T 1ob3_A 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286 (288)
T ss_dssp CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred ccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhh
Confidence 012357899999999999999999999999999999974
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-48 Score=412.92 Aligned_cols=257 Identities=27% Similarity=0.515 Sum_probs=232.1
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.++|.+.+.||+|+||.||+|.++.+++.||||++.+.........+.+..|..++..+..||+|+++++++.+.+.+|+
T Consensus 340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l 419 (674)
T 3pfq_A 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 419 (674)
T ss_dssp CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence 46799999999999999999999999999999999765443444567788999999998779999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC-CC
Q 010013 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PG 224 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~-~~ 224 (520)
||||++||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++... ..
T Consensus 420 V~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl---~~~g~ikL~DFGla~~~~~~~ 496 (674)
T 3pfq_A 420 VMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIWDG 496 (674)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEE---CSSSCEEECCCTTCEECCCTT
T ss_pred EEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEE---cCCCcEEEeecceeeccccCC
Confidence 99999999999999998899999999999999999999999999999999999999 457789999999998643 33
Q ss_pred CcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHH
Q 010013 225 DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (520)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (520)
......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....++...+......++. .++.++.+|
T Consensus 497 ~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~p~----~~s~~~~~l 572 (674)
T 3pfq_A 497 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAI 572 (674)
T ss_dssp CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCCCCT----TSCHHHHHH
T ss_pred cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCc----cCCHHHHHH
Confidence 34456789999999999864 5899999999999999999999999999999999999988766553 689999999
Q ss_pred HHHhcccCCCCCCCH-----HHHHcCCcccc
Q 010013 304 VKKMLHADPKERLSA-----AEVLNHPWMRV 329 (520)
Q Consensus 304 i~~~l~~dp~~Rps~-----~~~l~~~~~~~ 329 (520)
|.+||..||++||++ +++++||||+.
T Consensus 573 i~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~ 603 (674)
T 3pfq_A 573 CKGLMTKHPGKRLGCGPEGERDIKEHAFFRY 603 (674)
T ss_dssp HHHHSCSSSTTCTTCSTTHHHHHHSSGGGSS
T ss_pred HHHHccCCHHHCCCCCCCcHHHHhcCccccC
Confidence 999999999999997 99999999975
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-48 Score=400.03 Aligned_cols=257 Identities=30% Similarity=0.530 Sum_probs=225.8
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
..++|.+.+.||+|+||.||+|.++.+|+.||+|++.+...........+.+|+.+|+++. ||||+++++++.+.+.+|
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~-hp~Iv~l~~~~~~~~~l~ 260 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN-SRFVVSLAYAYETKDALC 260 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcC-CCCEeeEEEEEeeCCEEE
Confidence 3477999999999999999999999999999999997654433445577889999999998 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 145 LIMDLCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~~--l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
+||||++||+|.+++...+. +++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++....
T Consensus 261 lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILl---d~~g~vKL~DFGla~~~~ 337 (576)
T 2acx_A 261 LVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILL---DDHGHIRISDLGLAVHVP 337 (576)
T ss_dssp EEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTSCEEECCCTTCEECC
T ss_pred EEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEE---eCCCCeEEEecccceecc
Confidence 99999999999999977543 9999999999999999999999999999999999999 457789999999999876
Q ss_pred CCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCC----HHHHHHHHHcCCCCCCCCCCCCCC
Q 010013 223 PGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGET----EQSIFDAILRGHIDFSSDPWPNIS 297 (520)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 297 (520)
........+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.. ...+...+......++ ..++
T Consensus 338 ~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~~p----~~~s 413 (576)
T 2acx_A 338 EGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYS----ERFS 413 (576)
T ss_dssp TTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCCCC----TTSC
T ss_pred cCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccccCC----ccCC
Confidence 6655566789999999999875 58999999999999999999999998753 3455555655544333 4689
Q ss_pred HHHHHHHHHhcccCCCCCC-----CHHHHHcCCcccc
Q 010013 298 SSAKDIVKKMLHADPKERL-----SAAEVLNHPWMRV 329 (520)
Q Consensus 298 ~~~~~li~~~l~~dp~~Rp-----s~~~~l~~~~~~~ 329 (520)
+.+.+||.+||..||++|| ++.|+++||||+.
T Consensus 414 ~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~ 450 (576)
T 2acx_A 414 PQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450 (576)
T ss_dssp HHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTT
T ss_pred HHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhcc
Confidence 9999999999999999999 8999999999985
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-48 Score=385.57 Aligned_cols=270 Identities=35% Similarity=0.655 Sum_probs=228.8
Q ss_pred CcccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEeccccc--CCcccHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 010013 60 KPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKL--INRDDVEDVRREVQIMHHLTGHRNIVELKGAY 137 (520)
Q Consensus 60 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~ 137 (520)
.....+.++|.+.+.||+|+||.||+|.+..++..||+|++..... ......+.+.+|+.++++++ ||||+++++++
T Consensus 19 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~ 97 (345)
T 3hko_A 19 GSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLH-HPNIARLYEVY 97 (345)
T ss_dssp BCHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCC-CTTBCCEEEEE
T ss_pred chhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCC-CCCcceeehhh
Confidence 3455677899999999999999999999999999999999865432 13345678999999999998 99999999999
Q ss_pred EeCCeEEEEEeccCCCchHHHHHh----------------------------------------cCCCCHHHHHHHHHHH
Q 010013 138 EDRHSVNLIMDLCAGGELFDRIIA----------------------------------------KGHYSERAAANLCRQM 177 (520)
Q Consensus 138 ~~~~~~~lv~e~~~g~~L~~~l~~----------------------------------------~~~l~~~~~~~i~~qi 177 (520)
.+.+..++||||++|++|.+++.. ...+++..+..++.||
T Consensus 98 ~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi 177 (345)
T 3hko_A 98 EDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQI 177 (345)
T ss_dssp ECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHH
T ss_pred ccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHH
Confidence 999999999999999999998742 1123677888999999
Q ss_pred HHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC-----cccccccCCCccCchhhc---ccCCCc
Q 010013 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD-----VFKDLVGSAYYVAPEVLR---RNYGAE 249 (520)
Q Consensus 178 ~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~---~~~~~~ 249 (520)
+.||.|||++||+||||||+||+++.+ ....+||+|||++..+.... ......||+.|+|||++. ..++.+
T Consensus 178 ~~~l~~LH~~~ivH~Dlkp~NIll~~~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 256 (345)
T 3hko_A 178 FSALHYLHNQGICHRDIKPENFLFSTN-KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK 256 (345)
T ss_dssp HHHHHHHHHTTEECCCCCGGGEEESCS-SSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTH
T ss_pred HHHHHHHHHCCccccCCChhhEEEecC-CCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcH
Confidence 999999999999999999999999632 23379999999998653211 234567999999999985 358899
Q ss_pred chhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcccc
Q 010013 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 250 ~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
+|||||||++|+|++|..||.+....+....+......+....+..+++.+.++|.+||..||++|||+.++|+||||+.
T Consensus 257 ~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~ 336 (345)
T 3hko_A 257 CDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQ 336 (345)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHT
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhcc
Confidence 99999999999999999999999998888888888777766666678999999999999999999999999999999986
Q ss_pred CC
Q 010013 330 DG 331 (520)
Q Consensus 330 ~~ 331 (520)
..
T Consensus 337 ~~ 338 (345)
T 3hko_A 337 FS 338 (345)
T ss_dssp TS
T ss_pred Ch
Confidence 54
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-48 Score=390.19 Aligned_cols=264 Identities=31% Similarity=0.514 Sum_probs=210.9
Q ss_pred ccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 010013 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (520)
Q Consensus 62 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~ 141 (520)
...+.++|.+.+.||+|+||.||+|.++.+|+.||||++... .......+.+.+|+.+++++.+||||+++++++...+
T Consensus 4 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~-~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~ 82 (388)
T 3oz6_A 4 DRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDA-FQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADN 82 (388)
T ss_dssp CHHHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC---CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTT
T ss_pred cCcccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEeccc-ccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCC
Confidence 345678899999999999999999999999999999998643 3344556778899999999988999999999997544
Q ss_pred --eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccc
Q 010013 142 --SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (520)
Q Consensus 142 --~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~ 219 (520)
.+|+||||+. ++|.+.+.. +.+++..+..++.||+.||.|||+.||+||||||+|||+ +.++.+||+|||+++
T Consensus 83 ~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll---~~~~~~kl~DFG~a~ 157 (388)
T 3oz6_A 83 DRDVYLVFDYME-TDLHAVIRA-NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILL---NAECHVKVADFGLSR 157 (388)
T ss_dssp SSCEEEEEECCS-EEHHHHHHH-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCE
T ss_pred CCEEEEEecccC-cCHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEE---cCCCCEEecCCcccc
Confidence 7999999997 588887765 579999999999999999999999999999999999999 456789999999998
Q ss_pred ccCC----------------------CCcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHH
Q 010013 220 FFKP----------------------GDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQ 275 (520)
Q Consensus 220 ~~~~----------------------~~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~ 275 (520)
.... .......+||+.|+|||++.+ .++.++|||||||++|+|++|++||.+....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~ 237 (388)
T 3oz6_A 158 SFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTM 237 (388)
T ss_dssp ESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred cccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 6532 112334579999999998854 5899999999999999999999999998877
Q ss_pred HHHHHHHcCCCCCC------------------------------C-------------CCCCCCCHHHHHHHHHhcccCC
Q 010013 276 SIFDAILRGHIDFS------------------------------S-------------DPWPNISSSAKDIVKKMLHADP 312 (520)
Q Consensus 276 ~~~~~~~~~~~~~~------------------------------~-------------~~~~~~~~~~~~li~~~l~~dp 312 (520)
..+..+........ . .....+++.+.+||.+||..||
T Consensus 238 ~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP 317 (388)
T 3oz6_A 238 NQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNP 317 (388)
T ss_dssp HHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSG
T ss_pred HHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCc
Confidence 76666542110000 0 0112678999999999999999
Q ss_pred CCCCCHHHHHcCCccccCC
Q 010013 313 KERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 313 ~~Rps~~~~l~~~~~~~~~ 331 (520)
++|||+.|+|+||||+...
T Consensus 318 ~~R~t~~e~l~Hp~~~~~~ 336 (388)
T 3oz6_A 318 NKRISANDALKHPFVSIFH 336 (388)
T ss_dssp GGSCCHHHHTTSTTTTTTC
T ss_pred ccCCCHHHHhCCHHHHHhc
Confidence 9999999999999997543
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-48 Score=376.12 Aligned_cols=260 Identities=26% Similarity=0.444 Sum_probs=205.9
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.++|.+.+.||+|+||.||+|.++.+|+.||+|++.... .....+.+.+|+.+++++. ||||+++++++..++.+++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~l 80 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS--EEGTPSTAIREISLMKELK-HENIVRLYDVIHTENKLTL 80 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCS--TTCSCHHHHHHHHHHTTCC-BTTBCCEEEEECCTTEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc--ccccHHHHHHHHHHHHhcC-CCCcceEEEEEEECCeEEE
Confidence 357999999999999999999999999999999986543 2233467889999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccc
Q 010013 146 IMDLCAGGELFDRIIAK------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~------~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~ 219 (520)
||||++ ++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.
T Consensus 81 v~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~---~~~~~kl~Dfg~~~ 156 (317)
T 2pmi_A 81 VFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLIN---KRGQLKLGDFGLAR 156 (317)
T ss_dssp EEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCSSCE
T ss_pred EEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEc---CCCCEEECcCccce
Confidence 999997 5999888654 3589999999999999999999999999999999999994 56789999999998
Q ss_pred ccCCC-CcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCC------
Q 010013 220 FFKPG-DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSS------ 290 (520)
Q Consensus 220 ~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~------ 290 (520)
..... .......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+.........
T Consensus 157 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 236 (317)
T 2pmi_A 157 AFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSV 236 (317)
T ss_dssp ETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGG
T ss_pred ecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhh
Confidence 76432 23345678999999999864 4899999999999999999999999998887776666432110000
Q ss_pred ------------------------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 291 ------------------------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 291 ------------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
.....++..+.+||.+||+.||++|||+.|+|+||||.....
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 302 (317)
T 2pmi_A 237 TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYH 302 (317)
T ss_dssp GGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC
T ss_pred hhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccc
Confidence 011257889999999999999999999999999999986543
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-48 Score=383.72 Aligned_cols=271 Identities=24% Similarity=0.429 Sum_probs=225.6
Q ss_pred CcccccccCCcccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhcc----C
Q 010013 51 SSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT----G 126 (520)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~----~ 126 (520)
......+.......+.++|.+.+.||+|+||.||+|.+..+++.||||++... ....+.+..|+.+++.+. .
T Consensus 19 ~~~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~ 94 (360)
T 3llt_A 19 DDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI----KKYTRSAKIEADILKKIQNDDIN 94 (360)
T ss_dssp -CGGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC----HHHHHHHHHHHHHHHHTCCCSTT
T ss_pred CccceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc----hhhhhhhHHHHHHHHHhcccCCC
Confidence 34445556667778889999999999999999999999999999999998632 234466788999999996 5
Q ss_pred CCCeeEEEEEEEeCCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecC
Q 010013 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSS 204 (520)
Q Consensus 127 hp~iv~l~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~ 204 (520)
||||+++++++...+..++||||+ +++|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||++..
T Consensus 95 h~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~ 173 (360)
T 3llt_A 95 NNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDP 173 (360)
T ss_dssp GGGBCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCT
T ss_pred CCCeecccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccc
Confidence 999999999999999999999999 999999998754 59999999999999999999999999999999999999631
Q ss_pred ----------------------CCCCCeeEeecccccccCCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHH
Q 010013 205 ----------------------AEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYI 261 (520)
Q Consensus 205 ----------------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ 261 (520)
..++.+||+|||++..... ......||+.|+|||++.+ .++.++|||||||++|+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 251 (360)
T 3llt_A 174 YFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD--YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAE 251 (360)
T ss_dssp TCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS--CCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHH
T ss_pred cccccccchhcccccccccccccCCCCEEEEeccCceecCC--CCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHH
Confidence 1267899999999987543 2345679999999998864 58999999999999999
Q ss_pred HhhCCCCCCCCCHHHHHHHHHcCCCCCCCC---------------------CCC---------------------CCCHH
Q 010013 262 LLSGVPPFWGETEQSIFDAILRGHIDFSSD---------------------PWP---------------------NISSS 299 (520)
Q Consensus 262 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~---------------------~~~---------------------~~~~~ 299 (520)
|++|+.||.+....+....+......++.. .|+ ..++.
T Consensus 252 ll~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (360)
T 3llt_A 252 LYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHEL 331 (360)
T ss_dssp HHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHH
T ss_pred HHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHH
Confidence 999999999888777666654432222100 000 12367
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHcCCccc
Q 010013 300 AKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (520)
Q Consensus 300 ~~~li~~~l~~dp~~Rps~~~~l~~~~~~ 328 (520)
+.+||.+||+.||++|||+.|+|+||||+
T Consensus 332 l~~li~~~L~~dP~~Rpta~elL~hp~f~ 360 (360)
T 3llt_A 332 FCDFLYSILQIDPTLRPSPAELLKHKFLE 360 (360)
T ss_dssp HHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred HHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence 88999999999999999999999999996
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-47 Score=373.57 Aligned_cols=262 Identities=28% Similarity=0.523 Sum_probs=216.1
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.++|.+.+.||+|+||.||+|.+..+|+.||+|++.... ......+.+.+|+.+++++. ||||+++++++...+..++
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~l 79 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE-DDPVIKKIALREIRMLKQLK-HPNLVNLLEVFRRKRRLHL 79 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCC-C-HHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccc-cchHHHHHHHHHHHHHHhCC-CCCccchhheeecCCeEEE
Confidence 367999999999999999999999999999999986543 23334567889999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC-
Q 010013 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG- 224 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~- 224 (520)
||||+++++|.+++...+.+++..+..++.|++.||.|||++||+||||||+||++ +.++.+||+|||++......
T Consensus 80 v~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~ 156 (311)
T 4agu_A 80 VFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILI---TKHSVIKLCDFGFARLLTGPS 156 (311)
T ss_dssp EEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECC---
T ss_pred EEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEE---cCCCCEEEeeCCCchhccCcc
Confidence 99999999999988888889999999999999999999999999999999999999 45678999999999876532
Q ss_pred CcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCC-----------------
Q 010013 225 DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH----------------- 285 (520)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~----------------- 285 (520)
.......||+.|+|||++.+ .++.++||||||+++|+|++|..||.+....+....+....
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (311)
T 4agu_A 157 DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYF 236 (311)
T ss_dssp ---------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGG
T ss_pred cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccc
Confidence 23345678999999998854 57999999999999999999999999988766555443210
Q ss_pred --CCCCCC--------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 286 --IDFSSD--------PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 286 --~~~~~~--------~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
...+.. .++.++..+.+||.+||+.||++|||+.|+|+||||+....
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~ 293 (311)
T 4agu_A 237 SGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIRE 293 (311)
T ss_dssp TTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTCC-
T ss_pred ccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhccC
Confidence 001100 12467899999999999999999999999999999986543
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-48 Score=380.44 Aligned_cols=265 Identities=38% Similarity=0.690 Sum_probs=221.6
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccC-----CcccHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI-----NRDDVEDVRREVQIMHHLTGHRNIVELKGAY 137 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~ 137 (520)
..+.++|.+.+.||+|+||.||+|.+..+++.||||++...... .......+.+|+.+++++. ||||+++++++
T Consensus 6 ~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~ 84 (322)
T 2ycf_A 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN-HPCIIKIKNFF 84 (322)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCC-CTTBCCEEEEE
T ss_pred hhhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCC-CCCCceEeeEE
Confidence 34567899999999999999999999999999999998754321 1122345889999999998 99999999998
Q ss_pred EeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccc
Q 010013 138 EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (520)
Q Consensus 138 ~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~ 217 (520)
.... .++||||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+||+++.++.+..+||+|||+
T Consensus 85 ~~~~-~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 163 (322)
T 2ycf_A 85 DAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGH 163 (322)
T ss_dssp ESSS-EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred cCCc-eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence 7655 899999999999999998888999999999999999999999999999999999999997655566799999999
Q ss_pred ccccCCCCcccccccCCCccCchhhc----ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHH-HHHHHHHcCCCCCCCCC
Q 010013 218 SVFFKPGDVFKDLVGSAYYVAPEVLR----RNYGAEADIWSAGVILYILLSGVPPFWGETEQ-SIFDAILRGHIDFSSDP 292 (520)
Q Consensus 218 a~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~ 292 (520)
+.............||+.|+|||++. ..++.++|||||||++|+|++|..||...... .....+..+...+....
T Consensus 164 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 243 (322)
T 2ycf_A 164 SKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV 243 (322)
T ss_dssp CEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHH
T ss_pred ceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchh
Confidence 98876544445567999999999873 35889999999999999999999999765432 34445555555444333
Q ss_pred CCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcccc
Q 010013 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 293 ~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
+..++..+.++|.+||..||++|||+.++|+||||+.
T Consensus 244 ~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~ 280 (322)
T 2ycf_A 244 WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280 (322)
T ss_dssp HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCC
T ss_pred hhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCC
Confidence 4678999999999999999999999999999999974
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-48 Score=374.27 Aligned_cols=258 Identities=25% Similarity=0.353 Sum_probs=212.0
Q ss_pred ccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 010013 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (520)
Q Consensus 62 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~ 141 (520)
...+.++|.+.+.||+|+||+||+|.++.+++.||||++..... ..........|+..+.++..||||+++++++.+.+
T Consensus 52 ~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~ 130 (311)
T 3p1a_A 52 ESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFR-GPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG 130 (311)
T ss_dssp SCHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCC-SHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred cchhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEeccccc-ChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCC
Confidence 34456789999999999999999999999999999998764322 23334455667777777755999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccc
Q 010013 142 SVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 220 (520)
.+++||||+ +++|.+.+... ..+++..+..++.||+.||.|||+.||+||||||+|||++ .++.+||+|||++..
T Consensus 131 ~~~lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~---~~~~~kl~DFG~a~~ 206 (311)
T 3p1a_A 131 ILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLG---PRGRCKLGDFGLLVE 206 (311)
T ss_dssp EEEEEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---GGGCEEECCCTTCEE
T ss_pred EEEEEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEC---CCCCEEEccceeeee
Confidence 999999999 67888888764 4699999999999999999999999999999999999994 567799999999988
Q ss_pred cCCCCcccccccCCCccCchhhcccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHH
Q 010013 221 FKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300 (520)
Q Consensus 221 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (520)
...........||+.|+|||++.+.++.++|||||||++|+|++|..|+.+.. ....+..+.. +......+++.+
T Consensus 207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~l 281 (311)
T 3p1a_A 207 LGTAGAGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGE---GWQQLRQGYL--PPEFTAGLSSEL 281 (311)
T ss_dssp CC------CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSHH---HHHHHTTTCC--CHHHHTTSCHHH
T ss_pred cccCCCCcccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcc---HHHHHhccCC--CcccccCCCHHH
Confidence 76555555667999999999998889999999999999999999977765532 2333333322 111234689999
Q ss_pred HHHHHHhcccCCCCCCCHHHHHcCCcccc
Q 010013 301 KDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 301 ~~li~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
.++|.+||+.||++|||+.++|+||||+.
T Consensus 282 ~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 310 (311)
T 3p1a_A 282 RSVLVMMLEPDPKLRATAEALLALPVLRQ 310 (311)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred HHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence 99999999999999999999999999974
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-47 Score=367.40 Aligned_cols=261 Identities=32% Similarity=0.527 Sum_probs=231.2
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
...++|.+++.||+|+||.||+|.+..+++.+|+|++...........+.+.+|+.+++++. ||||+++++++.+.+..
T Consensus 12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~ 90 (294)
T 2rku_A 12 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFHGFFEDNDFV 90 (294)
T ss_dssp TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEE
T ss_pred CcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCC-CCCEeeeeeeeccCCEE
Confidence 34578999999999999999999999999999999997665555556778999999999997 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
++||||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||++.....
T Consensus 91 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~kl~dfg~~~~~~~ 167 (294)
T 2rku_A 91 FVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN---EDLEVKIGDFGLATKVEY 167 (294)
T ss_dssp EEEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCTTCEECCS
T ss_pred EEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEc---CCCCEEEEeccCceeccc
Confidence 99999999999999998888999999999999999999999999999999999999994 567899999999987643
Q ss_pred C-CcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHH
Q 010013 224 G-DVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (520)
Q Consensus 224 ~-~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (520)
. .......||+.|+|||++.+ .++.++||||||+++|+|++|..||......+....+.......+ ..++..+.
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 243 (294)
T 2rku_A 168 DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP----KHINPVAA 243 (294)
T ss_dssp TTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCC----TTSCHHHH
T ss_pred CccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccCCCc----cccCHHHH
Confidence 2 23345679999999999865 478899999999999999999999999888877777776655443 36789999
Q ss_pred HHHHHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 302 DIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 302 ~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
++|.+||+.||++|||+.++++||||.....
T Consensus 244 ~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~ 274 (294)
T 2rku_A 244 SLIQKMLQTDPTARPTINELLNDEFFTSGYI 274 (294)
T ss_dssp HHHHHHTCSSGGGSCCGGGGGGSHHHHTSCC
T ss_pred HHHHHHcccChhhCcCHHHHhhChheecCCc
Confidence 9999999999999999999999999976543
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-47 Score=383.08 Aligned_cols=257 Identities=26% Similarity=0.480 Sum_probs=215.5
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccC-CCCeeEEEEEEEeCCeEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG-HRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~-hp~iv~l~~~~~~~~~~~ 144 (520)
..+|.+.+.||+|+||.||+|.+.. ++.||||++..... .....+.+.+|+.+++++.. ||||+++++++...+.+|
T Consensus 55 ~~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~ 132 (390)
T 2zmd_A 55 GRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 132 (390)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred CCceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccc-cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEE
Confidence 4569999999999999999999875 89999999875432 34456789999999999984 699999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
+||| +.+++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++ ++.+||+|||++......
T Consensus 133 lv~E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~----~~~~kl~DFG~a~~~~~~ 207 (390)
T 2zmd_A 133 MVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPD 207 (390)
T ss_dssp EEEE-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES----SSCEEECCCSSSCCC---
T ss_pred EEEe-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE----CCeEEEEecCccccccCC
Confidence 9999 56889999999988999999999999999999999999999999999999994 467999999999876533
Q ss_pred C---cccccccCCCccCchhhcc------------cCCCcchhHHHHHHHHHHhhCCCCCCCCCH-HHHHHHHHcCCCCC
Q 010013 225 D---VFKDLVGSAYYVAPEVLRR------------NYGAEADIWSAGVILYILLSGVPPFWGETE-QSIFDAILRGHIDF 288 (520)
Q Consensus 225 ~---~~~~~~gt~~y~aPE~~~~------------~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~-~~~~~~~~~~~~~~ 288 (520)
. .....+||+.|+|||++.+ .++.++|||||||++|+|++|..||..... ......+.......
T Consensus 208 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~ 287 (390)
T 2zmd_A 208 TTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI 287 (390)
T ss_dssp ------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCC
T ss_pred CccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccC
Confidence 2 2245679999999999854 578899999999999999999999987543 34455555544333
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 289 SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 289 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
... ...+..+.+||.+||..||++|||+.|+|+||||+...
T Consensus 288 ~~~--~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~ 328 (390)
T 2zmd_A 288 EFP--DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 328 (390)
T ss_dssp CCC--CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred CCC--ccchHHHHHHHHHHcccChhhCCCHHHHhhCcCccccC
Confidence 322 24478999999999999999999999999999998654
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-47 Score=367.47 Aligned_cols=259 Identities=35% Similarity=0.619 Sum_probs=220.0
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
...++|.+++.||+|+||.||+|.+..+++.||+|++...........+.+.+|+.+++.+. ||||+++++++...+..
T Consensus 8 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 86 (276)
T 2h6d_A 8 VKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR-HPHIIKLYQVISTPTDF 86 (276)
T ss_dssp CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEE
T ss_pred ceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCC-CCCEeEEEEEEecCCeE
Confidence 34578999999999999999999999999999999987544333345678899999999998 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
++||||+++++|.+++...+.+++..+..++.||+.||.|||++||+|+||||+||+++ .++.+||+|||++.....
T Consensus 87 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~~l~dfg~~~~~~~ 163 (276)
T 2h6d_A 87 FMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLD---AHMNAKIADFGLSNMMSD 163 (276)
T ss_dssp EEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEEC---TTSCEEECCCCGGGCCCC
T ss_pred EEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEEC---CCCCEEEeecccccccCC
Confidence 99999999999999998888999999999999999999999999999999999999994 567899999999988765
Q ss_pred CCcccccccCCCccCchhhccc-C-CCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHH
Q 010013 224 GDVFKDLVGSAYYVAPEVLRRN-Y-GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (520)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~~~-~-~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (520)
........|++.|+|||.+.+. + +.++||||||+++|+|++|..||...........+..+....+ ..++..+.
T Consensus 164 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~ 239 (276)
T 2h6d_A 164 GEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIP----EYLNRSVA 239 (276)
T ss_dssp -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHH
T ss_pred CcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcccCc----hhcCHHHH
Confidence 5444556789999999998754 3 5799999999999999999999999888888887777654433 35789999
Q ss_pred HHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 302 DIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 302 ~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
++|.+||+.||++|||+.++++||||+..
T Consensus 240 ~li~~~l~~~p~~Rps~~~~l~h~~~~~~ 268 (276)
T 2h6d_A 240 TLLMHMLQVDPLKRATIKDIREHEWFKQD 268 (276)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHSHHHHTT
T ss_pred HHHHHHccCChhhCCCHHHHHhChhhccC
Confidence 99999999999999999999999999754
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-47 Score=368.04 Aligned_cols=259 Identities=32% Similarity=0.642 Sum_probs=228.3
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.++|.+.+.||+|+||.||+|.+..+++.||+|++...........+.+.+|+.+++++. ||||+++++++.+.+..++
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l 91 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HPNILRMYNYFHDRKRIYL 91 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCC-CCCEeeEEEEEEcCCEEEE
Confidence 467999999999999999999999999999999986543323334577899999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
||||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||++......
T Consensus 92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~kl~Dfg~~~~~~~~- 167 (284)
T 2vgo_A 92 MLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMG---YKGELKIADFGWSVHAPSL- 167 (284)
T ss_dssp EECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEEC---TTCCEEECCCTTCEECSSS-
T ss_pred EEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEc---CCCCEEEecccccccCccc-
Confidence 999999999999999888999999999999999999999999999999999999994 5678999999998765432
Q ss_pred cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Q 010013 226 VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (520)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (520)
......|++.|+|||++.+ .++.++||||||+++|+|++|..||...........+......++ +.++..+.++|
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li 243 (284)
T 2vgo_A 168 RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGSKDLI 243 (284)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCC----TTSCHHHHHHH
T ss_pred ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccccCCC----CcCCHHHHHHH
Confidence 2345679999999999875 488999999999999999999999999888888877777655443 36789999999
Q ss_pred HHhcccCCCCCCCHHHHHcCCccccCCCC
Q 010013 305 KKMLHADPKERLSAAEVLNHPWMRVDGDA 333 (520)
Q Consensus 305 ~~~l~~dp~~Rps~~~~l~~~~~~~~~~~ 333 (520)
.+||..||++|||+.++++||||+.....
T Consensus 244 ~~~l~~~p~~Rps~~~ll~h~~~~~~~~~ 272 (284)
T 2vgo_A 244 SKLLRYHPPQRLPLKGVMEHPWVKANSRR 272 (284)
T ss_dssp HHHSCSSGGGSCCHHHHHTCHHHHHHCCC
T ss_pred HHHhhcCHhhCCCHHHHhhCHHHHhhccc
Confidence 99999999999999999999999865443
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-47 Score=384.61 Aligned_cols=262 Identities=23% Similarity=0.330 Sum_probs=215.4
Q ss_pred ccceeecceeecc--CCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 66 RNTYIFGRELGRG--QFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 66 ~~~y~~~~~lg~G--~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
.++|.+++.||+| +||.||+|.++.+++.||||++..... .....+.+.+|+.+++++. ||||+++++++.+.+.+
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~ 101 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEAC-SNEMVTFLQGELHVSKLFN-HPNIVPYRATFIADNEL 101 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEeccccc-ChHHHHHHHHHHHHHHhCC-CCCCCcEeEEEEECCEE
Confidence 4679999999999 999999999999999999999976433 3445677899999999998 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 144 NLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
++||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||.+...
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll---~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 102 WVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILI---SVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp EEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCGGGCEEC
T ss_pred EEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEcccccceee
Confidence 9999999999999999875 679999999999999999999999999999999999999 45678999999988654
Q ss_pred CCC--------CcccccccCCCccCchhhcc---cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCC---
Q 010013 222 KPG--------DVFKDLVGSAYYVAPEVLRR---NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID--- 287 (520)
Q Consensus 222 ~~~--------~~~~~~~gt~~y~aPE~~~~---~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~--- 287 (520)
... .......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+..+...
T Consensus 179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 258 (389)
T 3gni_B 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLL 258 (389)
T ss_dssp EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC---------
T ss_pred ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccc
Confidence 221 11123478999999999865 4889999999999999999999999876554433332221110
Q ss_pred ---------------------------------------CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccc
Q 010013 288 ---------------------------------------FSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (520)
Q Consensus 288 ---------------------------------------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~ 328 (520)
.....+..+++.+.+||.+||+.||++|||+.|+|+||||+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~ 338 (389)
T 3gni_B 259 DTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFK 338 (389)
T ss_dssp -----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGG
T ss_pred cccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHH
Confidence 00012345789999999999999999999999999999998
Q ss_pred cCCC
Q 010013 329 VDGD 332 (520)
Q Consensus 329 ~~~~ 332 (520)
....
T Consensus 339 ~~~~ 342 (389)
T 3gni_B 339 QIKR 342 (389)
T ss_dssp GC--
T ss_pred HHhh
Confidence 6543
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-47 Score=380.43 Aligned_cols=263 Identities=27% Similarity=0.438 Sum_probs=215.0
Q ss_pred cccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 010013 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (520)
Q Consensus 61 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~ 140 (520)
....+.++|.+.+.||+|+||.||+|.++.+|+.||||++... .......+.+.+|+.++++++ ||||+++++++...
T Consensus 19 ~~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~-~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~ 96 (367)
T 1cm8_A 19 TAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRP-FQSELFAKRAYRELRLLKHMR-HENVIGLLDVFTPD 96 (367)
T ss_dssp SEECCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSST-TSSHHHHHHHHHHHHHHHHCC-BTTBCCCSEEECSC
T ss_pred ceeeecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCcc-ccCHHHHHHHHHHHHHHHhCC-CcCCCCceeeEecC
Confidence 3445678899999999999999999999999999999998643 233445677899999999998 99999999999765
Q ss_pred ------CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEee
Q 010013 141 ------HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATD 214 (520)
Q Consensus 141 ------~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~D 214 (520)
..+|+||||+ +++|.+++.. +.+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~---~~~~~kl~D 171 (367)
T 1cm8_A 97 ETLDDFTDFYLVMPFM-GTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVN---EDCELKILD 171 (367)
T ss_dssp SSTTTCCCCEEEEECC-SEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECC
T ss_pred CccccCceEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEc---CCCCEEEEe
Confidence 3469999999 8899888766 5799999999999999999999999999999999999994 567899999
Q ss_pred cccccccCCCCcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCC-----
Q 010013 215 FGLSVFFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID----- 287 (520)
Q Consensus 215 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~----- 287 (520)
||+++.... ......||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+......+..+......
T Consensus 172 fg~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~ 249 (367)
T 1cm8_A 172 FGLARQADS--EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEF 249 (367)
T ss_dssp CTTCEECCS--SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHH
T ss_pred eeccccccc--ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHH
Confidence 999987543 2345688999999998764 5899999999999999999999999998876666555331110
Q ss_pred ------------------CC----CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 288 ------------------FS----SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 288 ------------------~~----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
.. ...++.+++.+.+||.+||..||++|||+.++|+||||+....
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~~ 316 (367)
T 1cm8_A 250 VQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHD 316 (367)
T ss_dssp HHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC-
T ss_pred HHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhcC
Confidence 00 1123567899999999999999999999999999999986543
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-48 Score=393.93 Aligned_cols=262 Identities=28% Similarity=0.440 Sum_probs=210.9
Q ss_pred ccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC-
Q 010013 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR- 140 (520)
Q Consensus 62 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~- 140 (520)
...+.++|.+++.||+|+||.||+|.+..+++.||||++... .......+.+.+|+.+++.++ ||||+++++++...
T Consensus 57 ~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~-~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~ 134 (464)
T 3ttj_A 57 TFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVN-HKNIISLLNVFTPQK 134 (464)
T ss_dssp EEEEETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESG-GGSHHHHHHHHHHHHHHHHCC-CTTBCCCSEEECSCC
T ss_pred ceeecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECcc-ccChHHHHHHHHHHHHHHhCC-CCCCCcEEEEEccCC
Confidence 335678999999999999999999999999999999998754 234455678899999999998 99999999999654
Q ss_pred -----CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeec
Q 010013 141 -----HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDF 215 (520)
Q Consensus 141 -----~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Df 215 (520)
..+|+||||+.+ +|.+.+. ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+||
T Consensus 135 ~~~~~~~~~lv~E~~~~-~l~~~~~--~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~---~~~~~kl~DF 208 (464)
T 3ttj_A 135 TLEEFQDVYLVMELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---SDCTLKILDF 208 (464)
T ss_dssp STTTCCEEEEEEECCSE-EHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEECCC
T ss_pred ccccCCeEEEEEeCCCC-CHHHHHh--hcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEe---CCCCEEEEEE
Confidence 467999999976 5666564 3599999999999999999999999999999999999994 5678999999
Q ss_pred ccccccCCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCC-------
Q 010013 216 GLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID------- 287 (520)
Q Consensus 216 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~------- 287 (520)
|+++...........+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+....+.+..+......
T Consensus 209 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~ 288 (464)
T 3ttj_A 209 GLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 288 (464)
T ss_dssp CCC-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHT
T ss_pred EeeeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 99998766555667789999999999864 5899999999999999999999999998877666655432110
Q ss_pred ---------------CCCCCC----CC------------CCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 288 ---------------FSSDPW----PN------------ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 288 ---------------~~~~~~----~~------------~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
.....+ +. .++.+.+||.+||..||++|||++|+|+||||+...
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~~ 363 (464)
T 3ttj_A 289 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY 363 (464)
T ss_dssp TSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGC
T ss_pred HcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhhcc
Confidence 000000 00 146789999999999999999999999999998543
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-48 Score=381.75 Aligned_cols=261 Identities=28% Similarity=0.459 Sum_probs=211.4
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+.+.||+|+||.||+|.+..+++.||+|++..... ......+.+|+.+++++. ||||+++++++.+.+..++|
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 78 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDLK-HANIVTLHDIIHTEKSLTLV 78 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC--------CCCCCCCHHHHSCCC-CTTBCCEEEEEECSSCEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccc--cccchhHHHHHHHHHhcC-CCCCCeeeeEEeeCCEEEEE
Confidence 579999999999999999999999999999999864331 111123457999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC-
Q 010013 147 MDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG- 224 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~- 224 (520)
|||+. ++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 79 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~---~~~~~kl~Dfg~a~~~~~~~ 154 (324)
T 3mtl_A 79 FEYLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLIN---ERGELKLADFGLARAKSIPT 154 (324)
T ss_dssp EECCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEEC---TTCCEEECSSSEEECC----
T ss_pred ecccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEEC---CCCCEEEccCcccccccCCc
Confidence 99997 58888887654 599999999999999999999999999999999999994 5678999999999865432
Q ss_pred CcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCC----------
Q 010013 225 DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP---------- 292 (520)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~---------- 292 (520)
.......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+...........
T Consensus 155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 234 (324)
T 3mtl_A 155 KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEF 234 (324)
T ss_dssp --------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHH
T ss_pred cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhh
Confidence 23345578999999998864 479999999999999999999999999888777766654322111111
Q ss_pred ----------------CCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCCCC
Q 010013 293 ----------------WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDAS 334 (520)
Q Consensus 293 ----------------~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~~~ 334 (520)
.+.+++.+.+||.+||+.||++|||+.|+|+||||.......
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~ 292 (324)
T 3mtl_A 235 KTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERI 292 (324)
T ss_dssp HHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCSTT
T ss_pred cccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhccccc
Confidence 135688999999999999999999999999999998665443
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-48 Score=379.21 Aligned_cols=265 Identities=25% Similarity=0.394 Sum_probs=222.7
Q ss_pred ccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 010013 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (520)
Q Consensus 62 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~ 141 (520)
...+.++|.+.+.||+|+||.||+|.+..+++.||+|++.............+.+|+.+++++. ||||+++++++....
T Consensus 7 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~ 85 (311)
T 3ork_A 7 PSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN-HPAIVAVYDTGEAET 85 (311)
T ss_dssp CSEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCC-CTTBCCEEEEEEEEE
T ss_pred cceecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCC-CCCcceEEEeeeccC
Confidence 3456788999999999999999999999999999999997655545555678999999999998 999999999987643
Q ss_pred ----eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccc
Q 010013 142 ----SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (520)
Q Consensus 142 ----~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~ 217 (520)
..|+||||++|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+
T Consensus 86 ~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg~ 162 (311)
T 3ork_A 86 PAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS---ATNAVKVMDFGI 162 (311)
T ss_dssp TTEEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE---TTSCEEECCCSC
T ss_pred CCCcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEc---CCCCEEEeeccC
Confidence 3599999999999999999888999999999999999999999999999999999999995 466799999999
Q ss_pred ccccCCCC----cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCC
Q 010013 218 SVFFKPGD----VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292 (520)
Q Consensus 218 a~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 292 (520)
+....... ......||+.|+|||++.+ .++.++||||||+++|+|++|..||.+.................+...
T Consensus 163 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 242 (311)
T 3ork_A 163 ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSAR 242 (311)
T ss_dssp C------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHH
T ss_pred cccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccc
Confidence 98764322 2233568999999999865 588999999999999999999999999888777766666554443333
Q ss_pred CCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 293 ~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
...++..+.++|.+||+.||++||++.++|.|+|++..
T Consensus 243 ~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 280 (311)
T 3ork_A 243 HEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 280 (311)
T ss_dssp STTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence 45789999999999999999999999999999999754
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-47 Score=369.00 Aligned_cols=256 Identities=30% Similarity=0.522 Sum_probs=221.8
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
..|...+.||+|+||.||+|.++.+|+.||||++.... ....+.+.+|+.++++++ ||||+++++++...+..++|
T Consensus 45 ~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv 120 (321)
T 2c30_A 45 LLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK---QQRRELLFNEVVIMRDYQ-HFNVVEMYKSYLVGEELWVL 120 (321)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT---CCSHHHHHHHHHHHTTCC-CTTBCCEEEEEEETTEEEEE
T ss_pred hhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc---hhHHHHHHHHHHHHHhCC-CCCcceEEEEEEECCEEEEE
Confidence 34778889999999999999999899999999986533 334577899999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC-
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~- 225 (520)
|||++|++|.+++.. ..+++..+..++.||+.||.|||+.||+||||||+||+++ .++.+||+|||++.......
T Consensus 121 ~e~~~~~~L~~~l~~-~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~~~~~~~~~~ 196 (321)
T 2c30_A 121 MEFLQGGALTDIVSQ-VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLT---LDGRVKLSDFGFCAQISKDVP 196 (321)
T ss_dssp ECCCCSCBHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTCEECCSSSC
T ss_pred EecCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCcEEEeeeeeeeecccCcc
Confidence 999999999997754 5799999999999999999999999999999999999994 56789999999998765432
Q ss_pred cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Q 010013 226 VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (520)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (520)
......||+.|+|||++.+ .++.++||||||+++|+|++|..||.+.........+.....+.. .....+++.+.++|
T Consensus 197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li 275 (321)
T 2c30_A 197 KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKL-KNSHKVSPVLRDFL 275 (321)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCC-TTGGGSCHHHHHHH
T ss_pred ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCc-CccccCCHHHHHHH
Confidence 2345689999999999864 488999999999999999999999999888777777766543221 22346789999999
Q ss_pred HHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 305 KKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 305 ~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
.+||..||++|||+.++|+||||....
T Consensus 276 ~~~l~~dp~~Rps~~ell~hp~~~~~~ 302 (321)
T 2c30_A 276 ERMLVRDPQERATAQELLDHPFLLQTG 302 (321)
T ss_dssp HHHSCSSTTTSCCHHHHHTSGGGGGCC
T ss_pred HHHccCChhhCcCHHHHhcChhhccCC
Confidence 999999999999999999999997543
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-47 Score=393.04 Aligned_cols=256 Identities=29% Similarity=0.511 Sum_probs=224.1
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.++|.+.+.||+|+||.||+|+++.+|+.||+|++.+.........+.+.+|+.+++++. ||||+++++++.+...+|+
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~-hp~Iv~l~~~~~~~~~l~l 262 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH-SRFIVSLAYAFETKTDLCL 262 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcC-CCCEeeEEEEEeeCCEEEE
Confidence 478999999999999999999999999999999997654433445678899999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 146 IMDLCAGGELFDRIIAK----GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~----~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
||||++||+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++...
T Consensus 263 VmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl---~~~g~vkL~DFGla~~~ 339 (543)
T 3c4z_A 263 VMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVEL 339 (543)
T ss_dssp EECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTSCEEECCCTTCEEC
T ss_pred EEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEE---eCCCCEEEeecceeeec
Confidence 99999999999998764 369999999999999999999999999999999999999 45778999999999887
Q ss_pred CCCCc-ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCC----CHHHHHHHHHcCCCCCCCCCCCC
Q 010013 222 KPGDV-FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGE----TEQSIFDAILRGHIDFSSDPWPN 295 (520)
Q Consensus 222 ~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~----~~~~~~~~~~~~~~~~~~~~~~~ 295 (520)
..... ....+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+. ....+...+......++ ..
T Consensus 340 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~~p----~~ 415 (543)
T 3c4z_A 340 KAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP----DK 415 (543)
T ss_dssp CTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCCCC----TT
T ss_pred cCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccCCC----cc
Confidence 54433 334589999999999875 5899999999999999999999999875 34566666766655443 46
Q ss_pred CCHHHHHHHHHhcccCCCCCCC-----HHHHHcCCcccc
Q 010013 296 ISSSAKDIVKKMLHADPKERLS-----AAEVLNHPWMRV 329 (520)
Q Consensus 296 ~~~~~~~li~~~l~~dp~~Rps-----~~~~l~~~~~~~ 329 (520)
++..+.+||.+||..||++||+ +.++++||||+.
T Consensus 416 ~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~ 454 (543)
T 3c4z_A 416 FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRD 454 (543)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTT
T ss_pred cCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccC
Confidence 7999999999999999999996 589999999985
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-47 Score=375.52 Aligned_cols=262 Identities=27% Similarity=0.473 Sum_probs=218.9
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe------
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED------ 139 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~------ 139 (520)
.++|.+.+.||+|+||.||+|.++.+|+.||+|++..... .......+.+|+.+++++. ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~ 93 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE-KEGFPITALREIKILQLLK-HENVVNLIEICRTKASPYN 93 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSC-SSSSCHHHHHHHHHHHHCC-CTTBCCEEEEEEEC-----
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccc-cccchHHHHHHHHHHHhcc-CCCcccHhheeeccccccc
Confidence 4689999999999999999999999999999999865433 2233467789999999998 9999999999877
Q ss_pred --CCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecc
Q 010013 140 --RHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (520)
Q Consensus 140 --~~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg 216 (520)
.+.+++||||+.+ +|.+.+... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||
T Consensus 94 ~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~---~~~~~~kl~Dfg 169 (351)
T 3mi9_A 94 RCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFG 169 (351)
T ss_dssp ---CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCT
T ss_pred cCCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEE---cCCCCEEEccch
Confidence 4568999999975 777766554 579999999999999999999999999999999999999 456789999999
Q ss_pred cccccCCC-----CcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC
Q 010013 217 LSVFFKPG-----DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289 (520)
Q Consensus 217 ~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~ 289 (520)
++...... .......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+......++
T Consensus 170 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~ 249 (351)
T 3mi9_A 170 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 249 (351)
T ss_dssp TCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred hcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 99876422 22345678999999998854 479999999999999999999999999988877777665433333
Q ss_pred CCCCCC----------------------------CCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCCC
Q 010013 290 SDPWPN----------------------------ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDA 333 (520)
Q Consensus 290 ~~~~~~----------------------------~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~~ 333 (520)
...++. .++.+.+||.+||..||++|||+.|+|+||||......
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~ 321 (351)
T 3mi9_A 250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMP 321 (351)
T ss_dssp TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSSSCC
T ss_pred hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCCCCc
Confidence 333332 26789999999999999999999999999999865443
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-47 Score=365.90 Aligned_cols=265 Identities=26% Similarity=0.403 Sum_probs=222.7
Q ss_pred ccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 010013 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (520)
Q Consensus 62 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~ 141 (520)
...+.++|.+.+.||+|+||.||+|.+..+++.||+|++...........+.+.+|+.++++++ ||||+++++++...+
T Consensus 6 g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-hp~iv~~~~~~~~~~ 84 (294)
T 4eqm_A 6 GKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLS-HQNIVSMIDVDEEDD 84 (294)
T ss_dssp SSCEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCC-BTTBCCEEEEEECSS
T ss_pred hhHhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCC-CCCCceEEEeeeeCC
Confidence 3456788999999999999999999999999999999987655555556788999999999998 999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 142 SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
..++||||++|++|.+++...+++++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++...
T Consensus 85 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~---~~~~~~kl~Dfg~~~~~ 161 (294)
T 4eqm_A 85 CYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILI---DSNKTLKIFDFGIAKAL 161 (294)
T ss_dssp EEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCCSSSTTC
T ss_pred eEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEEeCCCcccc
Confidence 999999999999999999988899999999999999999999999999999999999999 45678999999999876
Q ss_pred CCCC--cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCC-CCCCCCCCC
Q 010013 222 KPGD--VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDF-SSDPWPNIS 297 (520)
Q Consensus 222 ~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 297 (520)
.... ......||+.|+|||++.+ .++.++||||||+++|+|++|..||.+...............+. .....+.+|
T Consensus 162 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (294)
T 4eqm_A 162 SETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIP 241 (294)
T ss_dssp -------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSC
T ss_pred ccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCC
Confidence 4332 2234579999999998865 48889999999999999999999999988776655555443322 122345789
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 298 ~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
+.+.++|.+||..||++||+..+.+.++|....
T Consensus 242 ~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~ 274 (294)
T 4eqm_A 242 QSLSNVILRATEKDKANRYKTIQEMKDDLSSVL 274 (294)
T ss_dssp HHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSS
T ss_pred HHHHHHHHHHhcCCHhHccccHHHHHHHHHHHH
Confidence 999999999999999999977777777776543
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-47 Score=374.40 Aligned_cols=258 Identities=26% Similarity=0.458 Sum_probs=222.0
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
...+.|.+.+.||+|+||.||+|.+..+++.||||++...........+.+.+|+.++++++ ||||+++++++...+..
T Consensus 51 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~ 129 (348)
T 1u5q_A 51 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQYRGCYLREHTA 129 (348)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEE
T ss_pred chhhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEECCeE
Confidence 34567999999999999999999999999999999987554433444577899999999998 99999999999999999
Q ss_pred EEEEeccCCCchHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 144 NLIMDLCAGGELFDRII-AKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~-~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
++||||+. |+|.+.+. ....+++..+..++.|++.||.|||++||+||||||+|||++ .++.+||+|||++....
T Consensus 130 ~lv~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~~kL~DfG~a~~~~ 205 (348)
T 1u5q_A 130 WLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS---EPGLVKLGDFGSASIMA 205 (348)
T ss_dssp EEEEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEE---TTTEEEECCCTTCBSSS
T ss_pred EEEEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC---CCCCEEEeeccCceecC
Confidence 99999997 57877775 456799999999999999999999999999999999999995 46789999999998764
Q ss_pred CCCcccccccCCCccCchhhc----ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCH
Q 010013 223 PGDVFKDLVGSAYYVAPEVLR----RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298 (520)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~----~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (520)
.. ....||+.|+|||++. +.++.++|||||||++|+|++|..||.+.........+.....+.. ....++.
T Consensus 206 ~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 280 (348)
T 1u5q_A 206 PA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPAL--QSGHWSE 280 (348)
T ss_dssp SB---CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC--CCTTSCH
T ss_pred CC---CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC--CCCCCCH
Confidence 32 3467999999999873 4588999999999999999999999998887776666665543322 2246789
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 299 ~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
.+.++|.+||+.||++|||+.++|+||||....
T Consensus 281 ~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~~ 313 (348)
T 1u5q_A 281 YFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 313 (348)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCC
T ss_pred HHHHHHHHHcccChhhCcCHHHHhhChhhhccC
Confidence 999999999999999999999999999997543
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-47 Score=366.38 Aligned_cols=258 Identities=32% Similarity=0.573 Sum_probs=198.4
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.++|.+.+.||+|+||.||+|.+..+++.||+|++...........+.+.+|+.+++++. ||||+++++++.+.+..++
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK-HPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBC-CTTBCCEEEEEECSSEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCC-CCCeEeEEEEEccCCeEEE
Confidence 367999999999999999999999999999999986544333344578999999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 146 IMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||++......
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~---~~~~~kl~dfg~~~~~~~~ 165 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLT---RNMNIKIADFGLATQLKMP 165 (278)
T ss_dssp EEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEEC---TTCCEEECCCTTCEECC--
T ss_pred EEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCCEEEEeecceeeccCC
Confidence 99999999999998875 5799999999999999999999999999999999999994 5678999999999876432
Q ss_pred C-cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHH
Q 010013 225 D-VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (520)
Q Consensus 225 ~-~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (520)
. ......||+.|+|||++.+ .++.++||||||+++|+|++|..||...........+...... ....++..+.+
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 241 (278)
T 3cok_A 166 HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYE----MPSFLSIEAKD 241 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSCCC----CCTTSCHHHHH
T ss_pred CCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcccC----CccccCHHHHH
Confidence 2 2234578999999998864 4788999999999999999999999876654444433332222 12457899999
Q ss_pred HHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 303 IVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 303 li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
+|.+||+.||++|||+.++|+||||....
T Consensus 242 li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 270 (278)
T 3cok_A 242 LIHQLLRRNPADRLSLSSVLDHPFMSRNS 270 (278)
T ss_dssp HHHHHSCSSGGGSCCHHHHTTSTTTC---
T ss_pred HHHHHcccCHhhCCCHHHHhcCccccCCC
Confidence 99999999999999999999999998543
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-46 Score=370.04 Aligned_cols=255 Identities=26% Similarity=0.512 Sum_probs=212.9
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe--CCe
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED--RHS 142 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~--~~~ 142 (520)
..++|.+++.||+|+||.||+|.+..+++.||+|++... ..+.+.+|+.+++++.+||||+++++++.+ ...
T Consensus 34 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~ 107 (330)
T 3nsz_A 34 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRT 107 (330)
T ss_dssp EGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCC
T ss_pred CCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc------chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCc
Confidence 357899999999999999999999999999999998532 347789999999999889999999999987 678
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
.++||||+.+++|.+++. .+++..+..++.||+.||.|||++||+||||||+|||++. +...+||+|||++....
T Consensus 108 ~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~--~~~~~kl~Dfg~a~~~~ 182 (330)
T 3nsz_A 108 PALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYH 182 (330)
T ss_dssp EEEEEECCCCCCHHHHGG---GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET--TTTEEEECCCTTCEECC
T ss_pred eEEEEeccCchhHHHHHH---hCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcC--CCCEEEEEeCCCceEcC
Confidence 999999999999988774 4899999999999999999999999999999999999963 23479999999998876
Q ss_pred CCCcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCC-HHHHHHH-------------HHcCCC
Q 010013 223 PGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGET-EQSIFDA-------------ILRGHI 286 (520)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~-~~~~~~~-------------~~~~~~ 286 (520)
.........|++.|+|||++.+ .++.++|||||||++|+|++|..||.... ....... +.....
T Consensus 183 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 262 (330)
T 3nsz_A 183 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI 262 (330)
T ss_dssp TTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTC
T ss_pred CCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhcc
Confidence 6665666789999999999864 48999999999999999999999995433 2222211 111111
Q ss_pred CCC--------------------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 287 DFS--------------------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 287 ~~~--------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
... ......+++.+.+||.+||+.||++|||+.|+|+||||+..
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~ 326 (330)
T 3nsz_A 263 ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 326 (330)
T ss_dssp CCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTC
T ss_pred ccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhh
Confidence 110 11112378999999999999999999999999999999854
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-46 Score=362.98 Aligned_cols=257 Identities=22% Similarity=0.417 Sum_probs=219.3
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe----CC
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED----RH 141 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~----~~ 141 (520)
...|.+.+.||+|+||.||+|.+..++..||+|++..... .....+.+.+|+.++++++ ||||+++++++.. ..
T Consensus 25 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~ 102 (290)
T 1t4h_A 25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQ-HPNIVRFYDSWESTVKGKK 102 (290)
T ss_dssp SCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEEESSSCE
T ss_pred ceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhh-CHHHHHHHHHHHHHHHhCC-CCCeeeeeeeeccccCCCc
Confidence 3568999999999999999999999999999999875443 4455678999999999998 9999999999875 46
Q ss_pred eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcC--CeeecCCCCcEEeecCCCCCCeeEeeccccc
Q 010013 142 SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG--VMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~ 219 (520)
.+++||||+++++|.+++...+.+++..+..++.||+.||.|||+.| |+||||||+||+++ ..++.+||+|||++.
T Consensus 103 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~--~~~~~~kl~Dfg~~~ 180 (290)
T 1t4h_A 103 CIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT--GPTGSVKIGDLGLAT 180 (290)
T ss_dssp EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEES--STTSCEEECCTTGGG
T ss_pred eEEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEE--CCCCCEEEeeCCCcc
Confidence 68999999999999999998889999999999999999999999999 99999999999995 246689999999997
Q ss_pred ccCCCCcccccccCCCccCchhhcccCCCcchhHHHHHHHHHHhhCCCCCCCCCH-HHHHHHHHcCCCCCCCCCCCCCCH
Q 010013 220 FFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETE-QSIFDAILRGHIDFSSDPWPNISS 298 (520)
Q Consensus 220 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 298 (520)
..... ......||+.|+|||++.+.++.++||||||+++|+|++|..||..... ......+..+.... ......++
T Consensus 181 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 257 (290)
T 1t4h_A 181 LKRAS-FAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPA--SFDKVAIP 257 (290)
T ss_dssp GCCTT-SBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCG--GGGGCCCH
T ss_pred ccccc-ccccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCcc--ccCCCCCH
Confidence 65433 3345679999999999988899999999999999999999999987554 44444444432221 12245678
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHcCCcccc
Q 010013 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 299 ~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
.+.++|.+||..||++|||+.++|+||||+.
T Consensus 258 ~l~~li~~~l~~dp~~Rps~~ell~h~~f~~ 288 (290)
T 1t4h_A 258 EVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred HHHHHHHHHccCChhhCCCHHHHhhCccccc
Confidence 9999999999999999999999999999974
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-48 Score=388.53 Aligned_cols=262 Identities=29% Similarity=0.451 Sum_probs=211.2
Q ss_pred CcccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 010013 60 KPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (520)
Q Consensus 60 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~ 139 (520)
...+....+|.+.+.||+|+||.||+|.+..++. +|+|++..... ...+|+.+++.+. ||||+++++++..
T Consensus 33 ~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~-------~~~~E~~il~~l~-h~niv~l~~~~~~ 103 (394)
T 4e7w_A 33 KTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKR-------FKNRELQIMRIVK-HPNVVDLKAFFYS 103 (394)
T ss_dssp SSCCEEEEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTT-------SCCHHHHHHHTCC-CTTBCCEEEEEEE
T ss_pred CCCCcccceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcc-------hHHHHHHHHHhCC-CCCcceEEEEEEe
Confidence 3445566789999999999999999999987765 88887754321 1237999999998 9999999999855
Q ss_pred CC------eEEEEEeccCCCchHHHH---HhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCe
Q 010013 140 RH------SVNLIMDLCAGGELFDRI---IAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPL 210 (520)
Q Consensus 140 ~~------~~~lv~e~~~g~~L~~~l---~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~ 210 (520)
.+ ++++||||++++.+.... .....+++..+..++.||+.||.|||++||+||||||+|||++ ..++.+
T Consensus 104 ~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~--~~~~~~ 181 (394)
T 4e7w_A 104 NGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLD--PPSGVL 181 (394)
T ss_dssp ESSSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE--TTTTEE
T ss_pred cCCCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEc--CCCCcE
Confidence 43 388999999875433222 2356799999999999999999999999999999999999995 246679
Q ss_pred eEeecccccccCCCCcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCC---
Q 010013 211 KATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH--- 285 (520)
Q Consensus 211 kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~--- 285 (520)
||+|||+++............||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+....+.+..+....
T Consensus 182 kL~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p 261 (394)
T 4e7w_A 182 KLIDFGSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTP 261 (394)
T ss_dssp EECCCTTCEECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCC
T ss_pred EEeeCCCcccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 9999999998766655566789999999998854 48999999999999999999999999988766655554310
Q ss_pred --------------CCCCC---C-----CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 286 --------------IDFSS---D-----PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 286 --------------~~~~~---~-----~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
..++. . ..+.+++++.+||.+||..||++|||+.++|+||||+....
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 330 (394)
T 4e7w_A 262 SREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRT 330 (394)
T ss_dssp CHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTS
T ss_pred CHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhcc
Confidence 01110 0 11347899999999999999999999999999999986433
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-47 Score=376.23 Aligned_cols=254 Identities=29% Similarity=0.523 Sum_probs=218.2
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCc-----ccHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR-----DDVEDVRREVQIMHHLTGHRNIVELKGAYE 138 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~-----~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~ 138 (520)
.+.++|.+.+.||+|+||.||+|.++.+++.||||++........ ...+.+.+|+.+++++. ||||+++++++.
T Consensus 21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~Iv~~~~~~~ 99 (335)
T 3dls_A 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVE-HANIIKVLDIFE 99 (335)
T ss_dssp HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCC-CTTBCCEEEEEE
T ss_pred ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCC-CCCEeeEEEEEe
Confidence 456789999999999999999999999999999999976543221 13345778999999997 999999999999
Q ss_pred eCCeEEEEEeccCCC-chHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccc
Q 010013 139 DRHSVNLIMDLCAGG-ELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (520)
Q Consensus 139 ~~~~~~lv~e~~~g~-~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~ 217 (520)
+.+.+++||||+.+| +|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+
T Consensus 100 ~~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~---~~~~~kL~Dfg~ 176 (335)
T 3dls_A 100 NQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIA---EDFTIKLIDFGS 176 (335)
T ss_dssp CSSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTSCEEECCCTT
T ss_pred eCCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEc---CCCcEEEeeccc
Confidence 999999999999766 9999999888999999999999999999999999999999999999994 567899999999
Q ss_pred ccccCCCCcccccccCCCccCchhhccc-C-CCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCC
Q 010013 218 SVFFKPGDVFKDLVGSAYYVAPEVLRRN-Y-GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295 (520)
Q Consensus 218 a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~-~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (520)
+.............||+.|+|||++.+. + +.++|||||||++|+|++|..||..... ..... ......
T Consensus 177 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~~----~~~~~~ 246 (335)
T 3dls_A 177 AAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE------TVEAA----IHPPYL 246 (335)
T ss_dssp CEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG------GTTTC----CCCSSC
T ss_pred ceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH------HHhhc----cCCCcc
Confidence 9987666655667899999999998653 3 7889999999999999999999976322 11111 112245
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 296 ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 296 ~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
+++.+.+||.+||..||++|||+.++|+||||+...
T Consensus 247 ~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~~~ 282 (335)
T 3dls_A 247 VSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPV 282 (335)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTCCC
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhcCccccCCc
Confidence 789999999999999999999999999999997543
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-46 Score=381.73 Aligned_cols=265 Identities=25% Similarity=0.461 Sum_probs=211.7
Q ss_pred ccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC-
Q 010013 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR- 140 (520)
Q Consensus 62 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~- 140 (520)
...+.++|.+.+.||+|+||.||+|.++.+++.||||++... .......+.+.+|+.+|++++ ||||+++++++...
T Consensus 21 ~~~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~-~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~ 98 (432)
T 3n9x_A 21 NVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRM-FEDLIDCKRILREITILNRLK-SDYIIRLYDLIIPDD 98 (432)
T ss_dssp GCCCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECST-TTSHHHHHHHHHHHHHHHHCC-CTTBCCEEEECCCSC
T ss_pred cceecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCch-hcChHHHHHHHHHHHHHHHcC-CCCcceEEEEEecCC
Confidence 345678999999999999999999999999999999998643 234445678899999999998 99999999998766
Q ss_pred ----CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecc
Q 010013 141 ----HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (520)
Q Consensus 141 ----~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg 216 (520)
..+|+||||+. ++|.+++.....+++..+..++.||+.||.|||+.||+||||||+|||+ +.++.+||+|||
T Consensus 99 ~~~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl---~~~~~~kL~DFG 174 (432)
T 3n9x_A 99 LLKFDELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLL---NQDCSVKVCDFG 174 (432)
T ss_dssp TTTCCCEEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCT
T ss_pred CCcCCeEEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEE---CCCCCEEEccCC
Confidence 57999999985 5999999888889999999999999999999999999999999999999 456789999999
Q ss_pred cccccCCCC-----------------------cccccccCCCccCchhh-c-ccCCCcchhHHHHHHHHHHhhC------
Q 010013 217 LSVFFKPGD-----------------------VFKDLVGSAYYVAPEVL-R-RNYGAEADIWSAGVILYILLSG------ 265 (520)
Q Consensus 217 ~a~~~~~~~-----------------------~~~~~~gt~~y~aPE~~-~-~~~~~~~Dv~slG~~l~~ll~g------ 265 (520)
+++...... .....+||+.|+|||++ . ..++.++|||||||++|+|++|
T Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~ 254 (432)
T 3n9x_A 175 LARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHIN 254 (432)
T ss_dssp TCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCS
T ss_pred CcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccccc
Confidence 998764322 13556899999999986 3 4589999999999999999984
Q ss_pred -----CCCCCCCC-----------------HHHHHHHH------------------------HcCCCCCCC---CCCCCC
Q 010013 266 -----VPPFWGET-----------------EQSIFDAI------------------------LRGHIDFSS---DPWPNI 296 (520)
Q Consensus 266 -----~~pf~~~~-----------------~~~~~~~~------------------------~~~~~~~~~---~~~~~~ 296 (520)
.++|.+.. ....+..+ .......+. ..++.+
T Consensus 255 ~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (432)
T 3n9x_A 255 DPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSI 334 (432)
T ss_dssp SGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTS
T ss_pred ccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCC
Confidence 44444432 01111111 111110000 012568
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 297 SSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 297 ~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
++.+.+||.+||..||++|||++|+|+||||+....
T Consensus 335 s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~ 370 (432)
T 3n9x_A 335 SDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRK 370 (432)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCC
T ss_pred CHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccC
Confidence 999999999999999999999999999999986543
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-47 Score=372.67 Aligned_cols=261 Identities=26% Similarity=0.461 Sum_probs=216.4
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
..++|.+.+.||+|+||.||+|.+..+|+.||+|++.... ......+.+.+|+.+++++. ||||+++++++.+.+..+
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~ 100 (331)
T 4aaa_A 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESD-DDKMVKKIAMREIKLLKQLR-HENLVNLLEVCKKKKRWY 100 (331)
T ss_dssp CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCS-SCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEE
T ss_pred hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCC-CchHHHHHHHHHHHHHhhCC-CCCEeeEEEEeecCCEEE
Confidence 3467999999999999999999999999999999986543 23334566889999999998 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
+||||+++++|.+++...+.+++..+..++.||+.||.|||+.||+||||||+||++ +.++.+||+|||++......
T Consensus 101 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~ 177 (331)
T 4aaa_A 101 LVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILV---SQSGVVKLCDFGFARTLAAP 177 (331)
T ss_dssp EEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCCTTC------
T ss_pred EEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEE---cCCCcEEEEeCCCceeecCC
Confidence 999999999998888777889999999999999999999999999999999999999 45678999999999875432
Q ss_pred -CcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC---------------
Q 010013 225 -DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI--------------- 286 (520)
Q Consensus 225 -~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~--------------- 286 (520)
.......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+.....
T Consensus 178 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (331)
T 4aaa_A 178 GEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPV 257 (331)
T ss_dssp ------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGG
T ss_pred ccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccc
Confidence 23345679999999999865 478999999999999999999999998887665554432100
Q ss_pred ----CCCC--------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 287 ----DFSS--------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 287 ----~~~~--------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
..+. ..++.+++.+.+||.+||+.||++|||+.|+|+||||+..
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 313 (331)
T 4aaa_A 258 FAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMD 313 (331)
T ss_dssp GTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHGG
T ss_pred cccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhccC
Confidence 0000 0123678999999999999999999999999999999854
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-46 Score=371.01 Aligned_cols=265 Identities=37% Similarity=0.664 Sum_probs=193.4
Q ss_pred ccccceeecc-eeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe---
Q 010013 64 DVRNTYIFGR-ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED--- 139 (520)
Q Consensus 64 ~~~~~y~~~~-~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~--- 139 (520)
.+.++|.+.+ .||+|+||.||+|.++.+++.||+|++... ....+|+..+.++.+||||+++++++..
T Consensus 25 ~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~ 96 (336)
T 3fhr_A 25 AVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS--------PKARQEVDHHWQASGGPHIVCILDVYENMHH 96 (336)
T ss_dssp CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEET
T ss_pred cccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc--------HHHHHHHHHHHHhcCCCChHHHHHHHhhccC
Confidence 4667899965 699999999999999999999999998542 2233444444444459999999999876
Q ss_pred -CCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecc
Q 010013 140 -RHSVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (520)
Q Consensus 140 -~~~~~lv~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg 216 (520)
....++||||++||+|.+++...+ .+++..++.++.||+.||.|||++||+||||||+||+++..+.++.+||+|||
T Consensus 97 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg 176 (336)
T 3fhr_A 97 GKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFG 176 (336)
T ss_dssp TEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred CCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccc
Confidence 556899999999999999998764 69999999999999999999999999999999999999766667789999999
Q ss_pred cccccCCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHH----HHHHHcCCCCCCCC
Q 010013 217 LSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSI----FDAILRGHIDFSSD 291 (520)
Q Consensus 217 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~----~~~~~~~~~~~~~~ 291 (520)
++...... ......||+.|+|||++.+ .++.++||||||+++|+|++|..||........ ...+......++..
T Consensus 177 ~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (336)
T 3fhr_A 177 FAKETTQN-ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNP 255 (336)
T ss_dssp TCEEC-----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTT
T ss_pred cceecccc-ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCch
Confidence 99876432 2345678999999999854 478899999999999999999999977665433 23334444455555
Q ss_pred CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCCCCCCc
Q 010013 292 PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKP 337 (520)
Q Consensus 292 ~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~~~~~~ 337 (520)
.+..++..+.+||.+||..||++|||+.++|+||||+........+
T Consensus 256 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~~~~ 301 (336)
T 3fhr_A 256 EWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTP 301 (336)
T ss_dssp TSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTGGGSCCCB
T ss_pred hhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccccccCCCCc
Confidence 6678999999999999999999999999999999998654444433
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-46 Score=371.28 Aligned_cols=263 Identities=25% Similarity=0.396 Sum_probs=212.8
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCC--cccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN--RDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~--~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~ 141 (520)
...++|.+.+.||+|+||.||+|.+..+|+.||+|++....... ....+.+.+|+.+++++. ||||+++++++....
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~ 85 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS-HPNIIGLLDAFGHKS 85 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCC-CTTBCCEEEEECCTT
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCC-CCCCCeEEEEEeeCC
Confidence 34578999999999999999999999999999999986533211 112346789999999998 999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccc
Q 010013 142 SVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 220 (520)
..++||||+.+ +|.+.+... ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..
T Consensus 86 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~---~~~~~kl~Dfg~a~~ 161 (346)
T 1ua2_A 86 NISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLD---ENGVLKLADFGLAKS 161 (346)
T ss_dssp CCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTCCEEECCCGGGST
T ss_pred ceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEc---CCCCEEEEeccccee
Confidence 99999999976 888888664 3689999999999999999999999999999999999994 567899999999987
Q ss_pred cCCC-CcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCC-----
Q 010013 221 FKPG-DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP----- 292 (520)
Q Consensus 221 ~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~----- 292 (520)
.... .......||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+....+.+..+...........
T Consensus 162 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 241 (346)
T 1ua2_A 162 FGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMC 241 (346)
T ss_dssp TTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTT
T ss_pred ccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhc
Confidence 6432 23445679999999999853 378899999999999999999999999888777766654211111111
Q ss_pred -------------------CCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 293 -------------------WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 293 -------------------~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
+..++..+.+||.+||..||++|||+.|+|+||||....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~~ 299 (346)
T 1ua2_A 242 SLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRP 299 (346)
T ss_dssp SSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSS
T ss_pred cCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcCC
Confidence 145678999999999999999999999999999998643
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-46 Score=367.87 Aligned_cols=259 Identities=27% Similarity=0.473 Sum_probs=212.1
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCC-CCeeEEEEEEEeCCe
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH-RNIVELKGAYEDRHS 142 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~h-p~iv~l~~~~~~~~~ 142 (520)
...++|.+.+.||+|+||.||+|.+. +++.||+|++.... ......+.+.+|+.+++++..| |||+++++++.....
T Consensus 6 ~~~~~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~ 83 (343)
T 3dbq_A 6 VKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 83 (343)
T ss_dssp SSSCEEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred eecCEEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeeccc-cchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCE
Confidence 34578999999999999999999885 58899999986543 2344567889999999999832 999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
+++||| +.+++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++ ++.+||+|||++....
T Consensus 84 ~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~----~~~~kl~DFG~a~~~~ 158 (343)
T 3dbq_A 84 IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQ 158 (343)
T ss_dssp EEEEEC-CCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE----TTEEEECCCSSSCCC-
T ss_pred EEEEEe-CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE----CCcEEEeecccccccC
Confidence 999999 55889999999988999999999999999999999999999999999999995 4569999999998764
Q ss_pred CCC---cccccccCCCccCchhhc------------ccCCCcchhHHHHHHHHHHhhCCCCCCCCCH-HHHHHHHHcCCC
Q 010013 223 PGD---VFKDLVGSAYYVAPEVLR------------RNYGAEADIWSAGVILYILLSGVPPFWGETE-QSIFDAILRGHI 286 (520)
Q Consensus 223 ~~~---~~~~~~gt~~y~aPE~~~------------~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~-~~~~~~~~~~~~ 286 (520)
... ......||+.|+|||++. ..++.++|||||||++|+|++|..||..... ......+.....
T Consensus 159 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~ 238 (343)
T 3dbq_A 159 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNH 238 (343)
T ss_dssp -----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTS
T ss_pred cccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCc
Confidence 332 223567999999999874 3478899999999999999999999987543 233444443332
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 287 DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 287 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
.... ....+..+.+||.+||..||++|||+.++|+||||+...
T Consensus 239 ~~~~--~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~ 281 (343)
T 3dbq_A 239 EIEF--PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 281 (343)
T ss_dssp CCCC--CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred ccCC--cccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccccccC
Confidence 2221 235578999999999999999999999999999998654
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-46 Score=358.59 Aligned_cols=257 Identities=23% Similarity=0.323 Sum_probs=213.9
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
.+.++|.+.+.||+|+||.||+|.+..+++.||+|++..... .......+.+|+..+.++..||||+++++++.+.+..
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~ 86 (289)
T 1x8b_A 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLA-GSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHM 86 (289)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCT-TSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEE
T ss_pred cccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEeccccc-ccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeE
Confidence 356789999999999999999999999999999999875432 2334567889999999995599999999999999999
Q ss_pred EEEEeccCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCC--------------
Q 010013 144 NLIMDLCAGGELFDRIIAK----GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA-------------- 205 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~----~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~-------------- 205 (520)
++||||++|++|.+++... +.+++..+..++.||+.||.|||++||+||||||+||+++..+
T Consensus 87 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 87 LIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-----------------
T ss_pred EEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 9999999999999999765 6799999999999999999999999999999999999996433
Q ss_pred --CCCCeeEeecccccccCCCCcccccccCCCccCchhhccc--CCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHH
Q 010013 206 --EDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAI 281 (520)
Q Consensus 206 --~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~ 281 (520)
....+||+|||.+....... ...||+.|+|||++.+. ++.++|||||||++|+|++|.+|+.... ....+
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~---~~~~~ 240 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQ---VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD---QWHEI 240 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSC---CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH---HHHHH
T ss_pred cCCceEEEEcccccccccCCcc---ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh---HHHHH
Confidence 45579999999998765432 34689999999998754 5579999999999999999988775443 23344
Q ss_pred HcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 282 LRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
..+.... ....++..+.++|.+||+.||++|||+.++|+||||...
T Consensus 241 ~~~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 286 (289)
T 1x8b_A 241 RQGRLPR---IPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSA 286 (289)
T ss_dssp HTTCCCC---CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC---
T ss_pred HcCCCCC---CCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhhh
Confidence 4443321 224689999999999999999999999999999999853
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-46 Score=375.63 Aligned_cols=260 Identities=28% Similarity=0.428 Sum_probs=206.6
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC-
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH- 141 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~- 141 (520)
..+.++|.+.+.||+|+||.||+|.+..+++.||||++.... ......+.+.+|+.+++.+. ||||+++++++....
T Consensus 21 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~ 98 (371)
T 2xrw_A 21 FTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN-HKNIIGLLNVFTPQKS 98 (371)
T ss_dssp EEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTT-SSHHHHHHHHHHHHHHHHCC-CTTBCCEEEEECSCCS
T ss_pred cchhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEecccc-CChHHHHHHHHHHHHHHhcC-CCCccceEEeeccccc
Confidence 345688999999999999999999999999999999986532 23445677889999999998 999999999997654
Q ss_pred -----eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecc
Q 010013 142 -----SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (520)
Q Consensus 142 -----~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg 216 (520)
.+++||||+.+ +|.+.+. ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||
T Consensus 99 ~~~~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~---~~~~~kl~Dfg 172 (371)
T 2xrw_A 99 LEEFQDVYIVMELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---SDCTLKILDFG 172 (371)
T ss_dssp TTTCCEEEEEEECCSE-EHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSCEEECCCC
T ss_pred cccccceEEEEEcCCC-CHHHHHh--hccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEc---CCCCEEEEEee
Confidence 78999999975 7878775 4689999999999999999999999999999999999994 56789999999
Q ss_pred cccccCCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC------
Q 010013 217 LSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS------ 289 (520)
Q Consensus 217 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~------ 289 (520)
++.............||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+........
T Consensus 173 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 252 (371)
T 2xrw_A 173 LARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 252 (371)
T ss_dssp C----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTT
T ss_pred cccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence 9987655444556789999999999865 589999999999999999999999999888777666654322110
Q ss_pred ----------------CCC---------CC-------CCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 290 ----------------SDP---------WP-------NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 290 ----------------~~~---------~~-------~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
... ++ ..+..+.+||.+||..||++|||++|+|+||||+..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~ 325 (371)
T 2xrw_A 253 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 325 (371)
T ss_dssp SCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred hhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhhh
Confidence 000 00 014678999999999999999999999999999753
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-45 Score=358.47 Aligned_cols=257 Identities=26% Similarity=0.454 Sum_probs=223.7
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
..+.|.+.+.||+|+||.||+|.+..+++.||+|++..... ....+.+.+|+.+++++. ||||+++++++......+
T Consensus 20 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 96 (303)
T 3a7i_A 20 PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCD-SPYVTKYYGSYLKDTKLW 96 (303)
T ss_dssp GGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC--STTHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEE
T ss_pred hHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc--HHHHHHHHHHHHHHHhCC-CCCEeEEEEEEecCCeEE
Confidence 44679999999999999999999999999999999865432 345678999999999997 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
+||||+++++|.+++.. +++++..+..++.||+.||.|||+.||+||||||+||++ +.++.+||+|||++......
T Consensus 97 lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~Dfg~~~~~~~~ 172 (303)
T 3a7i_A 97 IIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDT 172 (303)
T ss_dssp EEEECCTTEEHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECBTT
T ss_pred EEEEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEE---CCCCCEEEeecccceecCcc
Confidence 99999999999998754 579999999999999999999999999999999999999 45678999999999876543
Q ss_pred C-cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHH
Q 010013 225 D-VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (520)
Q Consensus 225 ~-~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (520)
. ......|++.|+|||++.+ .++.++||||||+++|+|++|..||...........+....... ....++..+.+
T Consensus 173 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~ 249 (303)
T 3a7i_A 173 QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPT---LEGNYSKPLKE 249 (303)
T ss_dssp BCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCC---CCSSCCHHHHH
T ss_pred ccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCCCC---CccccCHHHHH
Confidence 2 2345678999999999864 58899999999999999999999999888777776666554322 22467899999
Q ss_pred HHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 303 IVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 303 li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
+|.+||+.||++|||+.++++||||....
T Consensus 250 li~~~l~~dp~~Rps~~~ll~~~~~~~~~ 278 (303)
T 3a7i_A 250 FVEACLNKEPSFRPTAKELLKHKFILRNA 278 (303)
T ss_dssp HHHHHCCSSGGGSCCHHHHTTCHHHHHHC
T ss_pred HHHHHcCCChhhCcCHHHHhhChhhhcCC
Confidence 99999999999999999999999997543
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-46 Score=380.09 Aligned_cols=256 Identities=29% Similarity=0.469 Sum_probs=209.6
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe-----
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED----- 139 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~----- 139 (520)
...+|.+.+.||+|+||.||+|.++.+|+.||||++.... ....+|+.+++++. ||||+++++++..
T Consensus 52 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~il~~l~-hpniv~l~~~~~~~~~~~ 123 (420)
T 1j1b_A 52 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-------RFKNRELQIMRKLD-HCNIVRLRYFFYSSGEKK 123 (420)
T ss_dssp EEEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT-------TSCCHHHHHHHTCC-CTTBCCEEEEEEEEETTT
T ss_pred ccceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc-------hhHHHHHHHHHHcC-CCCccceeeEEeccCCCC
Confidence 3457999999999999999999999999999999986432 12347999999998 9999999998853
Q ss_pred -CCeEEEEEeccCCCchHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEee
Q 010013 140 -RHSVNLIMDLCAGGELFDRII----AKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATD 214 (520)
Q Consensus 140 -~~~~~lv~e~~~g~~L~~~l~----~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~D 214 (520)
..++++||||+++ +|.+.+. ....+++..+..++.||+.||.|||++||+||||||+|||++. +...+||+|
T Consensus 124 ~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~--~~~~~kl~D 200 (420)
T 1j1b_A 124 DEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCD 200 (420)
T ss_dssp TEEEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEET--TTTEEEECC
T ss_pred cceeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeC--CCCeEEecc
Confidence 2247799999976 6655553 3467999999999999999999999999999999999999963 345689999
Q ss_pred cccccccCCCCcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC--------
Q 010013 215 FGLSVFFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG-------- 284 (520)
Q Consensus 215 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~-------- 284 (520)
||+++............||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+....+.+..+...
T Consensus 201 FG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~ 280 (420)
T 1j1b_A 201 FGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 280 (420)
T ss_dssp CTTCEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHH
T ss_pred chhhhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 999998765555556789999999998853 5899999999999999999999999998876655554331
Q ss_pred ---------CCCCCC---CC-----CCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 285 ---------HIDFSS---DP-----WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 285 ---------~~~~~~---~~-----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
...++. .. .+.++.++.+||.+||..||++|||+.|+|+||||+...
T Consensus 281 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 344 (420)
T 1j1b_A 281 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 344 (420)
T ss_dssp HHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred HHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcccc
Confidence 011111 01 135689999999999999999999999999999997543
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-46 Score=363.40 Aligned_cols=261 Identities=25% Similarity=0.461 Sum_probs=216.7
Q ss_pred cccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe-
Q 010013 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED- 139 (520)
Q Consensus 61 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~- 139 (520)
......++|.+.+.||+|+||.||+|.+..+++.||+|++.... ...+.+.+|+.+++++..||||+++++++..
T Consensus 18 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 93 (326)
T 2x7f_A 18 ALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKK 93 (326)
T ss_dssp CCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----STTHHHHHHHHHHHHHCCSTTBCCEEEEEEEC
T ss_pred hccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc----ccHHHHHHHHHHHHhccCCCCeeeeeeEEeec
Confidence 44456788999999999999999999999999999999986432 2346788999999999569999999999977
Q ss_pred -----CCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeE
Q 010013 140 -----RHSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKA 212 (520)
Q Consensus 140 -----~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl 212 (520)
....++||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||
T Consensus 94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~---~~~~~kl 170 (326)
T 2x7f_A 94 NPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT---ENAEVKL 170 (326)
T ss_dssp C--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEC---TTCCEEE
T ss_pred cCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEc---CCCCEEE
Confidence 56899999999999999999764 5699999999999999999999999999999999999994 5678999
Q ss_pred eecccccccCCCC-cccccccCCCccCchhhc------ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCC
Q 010013 213 TDFGLSVFFKPGD-VFKDLVGSAYYVAPEVLR------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH 285 (520)
Q Consensus 213 ~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~------~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~ 285 (520)
+|||++....... ......|++.|+|||++. ..++.++|||||||++|+|++|..||.+.........+....
T Consensus 171 ~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~ 250 (326)
T 2x7f_A 171 VDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNP 250 (326)
T ss_dssp CCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC
T ss_pred eeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCc
Confidence 9999988764322 234457899999999984 348899999999999999999999998888776666665543
Q ss_pred CCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 286 IDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 286 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
... .....++..+.++|.+||..||++|||+.++++||||+..
T Consensus 251 ~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~ 293 (326)
T 2x7f_A 251 APR--LKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQ 293 (326)
T ss_dssp CCC--CSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCC
T ss_pred ccc--CCccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhC
Confidence 322 1235678999999999999999999999999999999854
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-47 Score=376.14 Aligned_cols=264 Identities=28% Similarity=0.443 Sum_probs=203.4
Q ss_pred CcccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 010013 60 KPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (520)
Q Consensus 60 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~ 139 (520)
.....+.++|.+.+.||+|+||.||+|.+..+|+.||||++... .......+.+.+|+.+++++. ||||+++++++..
T Consensus 22 ~~~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~-~~~~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~ 99 (367)
T 2fst_X 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMK-HENVIGLLDVFTP 99 (367)
T ss_dssp TEEEEEETTEEEEEECC----CCEEEEEETTTTEEEEEEECSST-TSSHHHHHHHHHHHHHHHHCC-CTTBCCCSEEECS
T ss_pred CcccCCCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCcc-ccCHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEec
Confidence 34455678999999999999999999999999999999998643 223445677889999999998 9999999999865
Q ss_pred C------CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEe
Q 010013 140 R------HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKAT 213 (520)
Q Consensus 140 ~------~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~ 213 (520)
. ..+++|||++ +++|.+++.. +.+++..+..++.||+.||.|||+.||+||||||+|||++ .++.+||+
T Consensus 100 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~---~~~~~kL~ 174 (367)
T 2fst_X 100 ARSLEEFNDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKIL 174 (367)
T ss_dssp CSSGGGCCCCEEEEECC-CEECC------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTCCEEEC
T ss_pred CCccccCCeEEEEeccc-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEEC---CCCCEEEe
Confidence 4 5689999999 7899887765 6799999999999999999999999999999999999994 56789999
Q ss_pred ecccccccCCCCcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC-----
Q 010013 214 DFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI----- 286 (520)
Q Consensus 214 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~----- 286 (520)
|||+++.... ......||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+......+..+.....
T Consensus 175 DFG~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~ 252 (367)
T 2fst_X 175 DFGLARHTAD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 252 (367)
T ss_dssp C-----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHH
T ss_pred eccccccccc--cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 9999987543 2345689999999998864 589999999999999999999999999887666655543110
Q ss_pred ------------------CCCCC----CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 287 ------------------DFSSD----PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 287 ------------------~~~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
..+.. .++.+++.+.+||.+||..||++|||+.++|+||||.....
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~~~ 320 (367)
T 2fst_X 253 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 320 (367)
T ss_dssp HHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred HHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhccC
Confidence 00110 12456889999999999999999999999999999986543
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-46 Score=375.71 Aligned_cols=255 Identities=28% Similarity=0.479 Sum_probs=211.1
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe----
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED---- 139 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~---- 139 (520)
...++|.+++.||+|+||.||+|.+..+|+.||+|++..... ...+|+.+++.+. ||||+++++++..
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-------~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~ 75 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR-------YKNRELDIMKVLD-HVNIIKLVDYFYTTGDE 75 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT-------SCCHHHHHHTTCC-CTTBCCEEEEEEEC---
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc-------hHHHHHHHHHHcC-CCCccchhheeeecCcc
Confidence 345789999999999999999999999999999999864321 2237999999998 9999999999843
Q ss_pred ----------------------------------CCeEEEEEeccCCCchHHHHH----hcCCCCHHHHHHHHHHHHHHH
Q 010013 140 ----------------------------------RHSVNLIMDLCAGGELFDRII----AKGHYSERAAANLCRQMVTVV 181 (520)
Q Consensus 140 ----------------------------------~~~~~lv~e~~~g~~L~~~l~----~~~~l~~~~~~~i~~qi~~~l 181 (520)
..++++||||++| +|.+.+. ..+.+++..+..++.||+.||
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL 154 (383)
T 3eb0_A 76 EPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAV 154 (383)
T ss_dssp ----------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 3458999999975 7666554 356799999999999999999
Q ss_pred HHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCcccccccCCCccCchhhcc--cCCCcchhHHHHHHH
Q 010013 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVIL 259 (520)
Q Consensus 182 ~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l 259 (520)
.|||++||+||||||+|||++. .++.+||+|||++.............||+.|+|||++.+ .++.++||||+||++
T Consensus 155 ~~LH~~gi~H~Dikp~Nil~~~--~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 232 (383)
T 3eb0_A 155 GFIHSLGICHRDIKPQNLLVNS--KDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF 232 (383)
T ss_dssp HHHHTTTEECSCCCGGGEEEET--TTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred HHHHHCcCccCccCHHHEEEcC--CCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHH
Confidence 9999999999999999999962 456799999999998766665666789999999998754 489999999999999
Q ss_pred HHHhhCCCCCCCCCHHHHHHHHHcCC-----------------CCCCC---C-----CCCCCCHHHHHHHHHhcccCCCC
Q 010013 260 YILLSGVPPFWGETEQSIFDAILRGH-----------------IDFSS---D-----PWPNISSSAKDIVKKMLHADPKE 314 (520)
Q Consensus 260 ~~ll~g~~pf~~~~~~~~~~~~~~~~-----------------~~~~~---~-----~~~~~~~~~~~li~~~l~~dp~~ 314 (520)
|+|++|+.||.+....+....+.... ..++. . ....+++.+.+||.+||..||++
T Consensus 233 ~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 312 (383)
T 3eb0_A 233 GELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDL 312 (383)
T ss_dssp HHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGG
T ss_pred HHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhh
Confidence 99999999999988777666654310 01110 0 11347899999999999999999
Q ss_pred CCCHHHHHcCCcccc
Q 010013 315 RLSAAEVLNHPWMRV 329 (520)
Q Consensus 315 Rps~~~~l~~~~~~~ 329 (520)
|||+.|+|+||||+.
T Consensus 313 R~t~~e~l~hp~f~~ 327 (383)
T 3eb0_A 313 RINPYEAMAHPFFDH 327 (383)
T ss_dssp SCCHHHHHTSGGGHH
T ss_pred CCCHHHHhcCHHHHH
Confidence 999999999999974
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-47 Score=376.27 Aligned_cols=257 Identities=30% Similarity=0.550 Sum_probs=217.0
Q ss_pred ccceeecceeeccCCeEEEEEEEc---CCCcEEEEEEecccccC-CcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHK---DTKQQFACKSISSRKLI-NRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~~avK~~~~~~~~-~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~ 141 (520)
.++|.+.+.||+|+||.||+|.+. .+++.||||++...... .....+.+.+|+.+++++.+||||+++++++....
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 368999999999999999999984 47899999998654321 12234567789999999977999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 142 SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
.+++||||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++..
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~DfG~a~~~ 209 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEF 209 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEESCSSEEEEC
T ss_pred eEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCcEEEeeCCCCeec
Confidence 999999999999999999988899999999999999999999999999999999999999 45678999999999865
Q ss_pred CCCC--cccccccCCCccCchhhcc---cCCCcchhHHHHHHHHHHhhCCCCCCCCC----HHHHHHHHHcCCCCCCCCC
Q 010013 222 KPGD--VFKDLVGSAYYVAPEVLRR---NYGAEADIWSAGVILYILLSGVPPFWGET----EQSIFDAILRGHIDFSSDP 292 (520)
Q Consensus 222 ~~~~--~~~~~~gt~~y~aPE~~~~---~~~~~~Dv~slG~~l~~ll~g~~pf~~~~----~~~~~~~~~~~~~~~~~~~ 292 (520)
.... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.... ...+...+......++
T Consensus 210 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--- 286 (355)
T 1vzo_A 210 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYP--- 286 (355)
T ss_dssp CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCC---
T ss_pred ccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCCCCC---
Confidence 4322 2234579999999999864 37889999999999999999999997532 3445555554443332
Q ss_pred CCCCCHHHHHHHHHhcccCCCCCC-----CHHHHHcCCcccc
Q 010013 293 WPNISSSAKDIVKKMLHADPKERL-----SAAEVLNHPWMRV 329 (520)
Q Consensus 293 ~~~~~~~~~~li~~~l~~dp~~Rp-----s~~~~l~~~~~~~ 329 (520)
..++..+.+||.+||..||++|| |+.++++||||+.
T Consensus 287 -~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~ 327 (355)
T 1vzo_A 287 -QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK 327 (355)
T ss_dssp -TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTT
T ss_pred -cccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhc
Confidence 46789999999999999999999 9999999999974
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-46 Score=371.24 Aligned_cols=251 Identities=24% Similarity=0.403 Sum_probs=214.2
Q ss_pred cccceeecceeeccCCeEEEEEEEcC-------CCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKD-------TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAY 137 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-------~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~ 137 (520)
..++|.+++.||+|+||.||+|.+.. ++..||+|++.... .....+.+.+|+.+++++..||||+++++++
T Consensus 79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~ 156 (370)
T 2psq_A 79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 156 (370)
T ss_dssp CGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC--BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEE
T ss_pred cHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc--CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence 45789999999999999999998752 45679999986432 3345677999999999994599999999999
Q ss_pred EeCCeEEEEEeccCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEe
Q 010013 138 EDRHSVNLIMDLCAGGELFDRIIAKG----------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLF 201 (520)
Q Consensus 138 ~~~~~~~lv~e~~~g~~L~~~l~~~~----------------~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll 201 (520)
...+.+|+||||++||+|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 157 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll 236 (370)
T 2psq_A 157 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV 236 (370)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE
T ss_pred ccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEE
Confidence 99999999999999999999997653 47899999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEeecccccccCCCCc---ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHH
Q 010013 202 SSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQS 276 (520)
Q Consensus 202 ~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~ 276 (520)
+.++.+||+|||+++....... .....+|+.|+|||++.+ .++.++|||||||++|+|++ |..||.+....+
T Consensus 237 ---~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~ 313 (370)
T 2psq_A 237 ---TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 313 (370)
T ss_dssp ---CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG
T ss_pred ---CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 4567899999999987643321 233457789999998864 58999999999999999999 999999988877
Q ss_pred HHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
....+..+.... ....++..+.++|.+||+.||++|||+.++++
T Consensus 314 ~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~ 357 (370)
T 2psq_A 314 LFKLLKEGHRMD---KPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 357 (370)
T ss_dssp HHHHHHTTCCCC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHhcCCCCC---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 777776654322 22468899999999999999999999999987
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-46 Score=357.13 Aligned_cols=259 Identities=29% Similarity=0.569 Sum_probs=219.5
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
+.++|.+.+.||+|+||.||+|.++.+++.||+|++..... ....+.+.+|+.+++.+. ||||+++++++.+.+..+
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 81 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLN-HENVVKFYGHRREGNIQY 81 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC--TTHHHHHHHHHHHHHTCC-CTTBCCEEEEEEETTEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc--hhhhHHHHHHHHHHHhcC-CCCceeeeeEEEcCCEEE
Confidence 34679999999999999999999999999999999865432 234577899999999998 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
+||||+++++|.+++.....+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||.+......
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~kl~dfg~~~~~~~~ 158 (276)
T 2yex_A 82 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLATVFRYN 158 (276)
T ss_dssp EEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCCTTCEECEET
T ss_pred EEEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEc---cCCCEEEeeCCCccccCCC
Confidence 9999999999999998777899999999999999999999999999999999999994 5677999999999865322
Q ss_pred C---cccccccCCCccCchhhccc--CCCcchhHHHHHHHHHHhhCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCCCCH
Q 010013 225 D---VFKDLVGSAYYVAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQ-SIFDAILRGHIDFSSDPWPNISS 298 (520)
Q Consensus 225 ~---~~~~~~gt~~y~aPE~~~~~--~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 298 (520)
. ......|++.|+|||++.+. .+.++||||||+++|+|++|..||...... .....+...... ...+..++.
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 236 (276)
T 2yex_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY--LNPWKKIDS 236 (276)
T ss_dssp TEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTT--STTGGGSCH
T ss_pred cchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccc--cCchhhcCH
Confidence 2 23456789999999998643 367899999999999999999999876542 223333332222 223457899
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 299 ~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
.+.++|.+||..||++|||+.++++||||+...
T Consensus 237 ~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~ 269 (276)
T 2yex_A 237 APLALLHKILVENPSARITIPDIKKDRWYNKPL 269 (276)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred HHHHHHHHHCCCCchhCCCHHHHhcCccccChh
Confidence 999999999999999999999999999998653
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-46 Score=370.00 Aligned_cols=254 Identities=27% Similarity=0.418 Sum_probs=206.6
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC---
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH--- 141 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~--- 141 (520)
+.++|.+.+.||+|+||.||+|.++.+|+.||||++.... .....+.+.+|+.++++++ ||||+++++++.+..
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~ 80 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLE-HPGIVRYFNAWLETPPEK 80 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS--TTTHHHHHHHHHHHHTSCC-CTTBCCEEEEEEECCSCH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC--chhHHHHHHHHHHHHHhCC-CCCEeeEEEEEEEeccch
Confidence 4567999999999999999999999999999999986433 3345678999999999998 999999999886543
Q ss_pred ------------------------------------------------------eEEEEEeccCCCchHHHHHhcCC---
Q 010013 142 ------------------------------------------------------SVNLIMDLCAGGELFDRIIAKGH--- 164 (520)
Q Consensus 142 ------------------------------------------------------~~~lv~e~~~g~~L~~~l~~~~~--- 164 (520)
+.++|||||+|++|.+++.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~ 160 (332)
T 3qd2_B 81 WQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLED 160 (332)
T ss_dssp HHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGG
T ss_pred hhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccc
Confidence 38999999999999999987643
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC-------------cccccc
Q 010013 165 YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD-------------VFKDLV 231 (520)
Q Consensus 165 l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-------------~~~~~~ 231 (520)
.++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++....... ......
T Consensus 161 ~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (332)
T 3qd2_B 161 REHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFT---MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQV 237 (332)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCTTCEECSCC--------------CCCSCC
T ss_pred hhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEe---CCCCEEEeecCcccccccchhhccccccccccccccccC
Confidence 56677899999999999999999999999999999994 56789999999998765432 223457
Q ss_pred cCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhccc
Q 010013 232 GSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310 (520)
Q Consensus 232 gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 310 (520)
||+.|+|||++.+ .++.++|||||||++|+|++|..|+.. .......+.....+ ..+...++.+.++|.+||+.
T Consensus 238 gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~ 312 (332)
T 3qd2_B 238 GTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME--RVRIITDVRNLKFP---LLFTQKYPQEHMMVQDMLSP 312 (332)
T ss_dssp -CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH--HHHHHHHHHTTCCC---HHHHHHCHHHHHHHHHHHCS
T ss_pred CCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH--HHHHHHHhhccCCC---cccccCChhHHHHHHHHccC
Confidence 9999999999865 589999999999999999998777421 12222333332221 11234567889999999999
Q ss_pred CCCCCCCHHHHHcCCcccc
Q 010013 311 DPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 311 dp~~Rps~~~~l~~~~~~~ 329 (520)
||++|||+.|+|+||||+.
T Consensus 313 ~p~~Rps~~~~l~~~~f~~ 331 (332)
T 3qd2_B 313 SPTERPEATDIIENAIFEN 331 (332)
T ss_dssp SGGGSCCHHHHHHSTTCCC
T ss_pred CCCcCCCHHHHhhchhhhc
Confidence 9999999999999999974
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-46 Score=359.64 Aligned_cols=261 Identities=28% Similarity=0.474 Sum_probs=218.2
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~ 142 (520)
....++|.+.+.||+|+||.||+|.+..+++.+|+|++... .....+.+.+|+.+++++. ||||+++++++...+.
T Consensus 15 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~---~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~ 90 (302)
T 2j7t_A 15 LDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYIVEIEILATCD-HPYIVKLLGAYYHDGK 90 (302)
T ss_dssp SCGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHHHHCC-CTTBCCEEEEEECC-C
T ss_pred cCCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCC---CHHHHHHHHHHHHHHhcCC-CCCEeeeeeeeeeCCe
Confidence 34668899999999999999999999999999999998643 2345678899999999998 9999999999999999
Q ss_pred EEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 143 VNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
.++||||+++++|.+++.. ...+++..+..++.||+.||.|||++|++||||||+||+++ .++.+||+|||++...
T Consensus 91 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~~~~ 167 (302)
T 2j7t_A 91 LWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMT---LEGDIRLADFGVSAKN 167 (302)
T ss_dssp EEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEC---TTSCEEECCCHHHHHH
T ss_pred EEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEC---CCCCEEEEECCCCccc
Confidence 9999999999999998876 46799999999999999999999999999999999999994 5677999999987543
Q ss_pred CCC-CcccccccCCCccCchhhc------ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCC
Q 010013 222 KPG-DVFKDLVGSAYYVAPEVLR------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP 294 (520)
Q Consensus 222 ~~~-~~~~~~~gt~~y~aPE~~~------~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (520)
... .......|++.|+|||++. ..++.++||||||+++|+|++|..||...........+......... ...
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~ 246 (302)
T 2j7t_A 168 LKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLL-TPS 246 (302)
T ss_dssp HHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCS-SGG
T ss_pred cccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcccC-Ccc
Confidence 211 1123457899999999873 34788999999999999999999999998887777666665433221 224
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 295 NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 295 ~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
.++..+.++|.+||+.||++|||+.++++||||+...
T Consensus 247 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 283 (302)
T 2j7t_A 247 KWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSIT 283 (302)
T ss_dssp GSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCC
T ss_pred ccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhhc
Confidence 6789999999999999999999999999999998543
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-46 Score=365.94 Aligned_cols=260 Identities=24% Similarity=0.400 Sum_probs=214.4
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC--
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH-- 141 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~-- 141 (520)
...++|.+.+.||+|+||.||+|.+..+++.||||++..... ....+.+.+|+.++++++ ||||+++++++....
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~ 82 (319)
T 4euu_A 6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF--LRPVDVQMREFEVLKKLN-HKNIVKLFAIEEETTTR 82 (319)
T ss_dssp CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG--GSCHHHHHHHHHHHHHCC-CTTBCCEEEEEECTTTC
T ss_pred CCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc--cchHHHHHHHHHHHHhcC-CCCcceEEEEeecCCCc
Confidence 456789999999999999999999999999999999875432 233577889999999998 999999999988755
Q ss_pred eEEEEEeccCCCchHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeec-CCCCCCeeEeeccc
Q 010013 142 SVNLIMDLCAGGELFDRIIAKGH---YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSS-SAEDSPLKATDFGL 217 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~l~~~~~---l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~-~~~~~~~kl~Dfg~ 217 (520)
..++||||++|++|.+++..... +++..+..++.||+.||.|||++||+||||||+|||+.. .+....+||+|||+
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~ 162 (319)
T 4euu_A 83 HKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (319)
T ss_dssp CEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTT
T ss_pred eEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCC
Confidence 78999999999999999976533 999999999999999999999999999999999999833 23455799999999
Q ss_pred ccccCCCCcccccccCCCccCchhhc---------ccCCCcchhHHHHHHHHHHhhCCCCCCCCC----HHHHHHHHHcC
Q 010013 218 SVFFKPGDVFKDLVGSAYYVAPEVLR---------RNYGAEADIWSAGVILYILLSGVPPFWGET----EQSIFDAILRG 284 (520)
Q Consensus 218 a~~~~~~~~~~~~~gt~~y~aPE~~~---------~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~----~~~~~~~~~~~ 284 (520)
+.............||+.|+|||++. ..++.++|||||||++|+|++|..||.... ..+....+..+
T Consensus 163 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 242 (319)
T 4euu_A 163 ARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242 (319)
T ss_dssp CEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHH
T ss_pred ceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcC
Confidence 99876666566678999999999874 458899999999999999999999996433 23444444443
Q ss_pred CCCC-------------------C--CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCc
Q 010013 285 HIDF-------------------S--SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326 (520)
Q Consensus 285 ~~~~-------------------~--~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~ 326 (520)
.... + ......++..+.++|.+||..||++|||+.|+|+||-
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~ 305 (319)
T 4euu_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS 305 (319)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred CCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccH
Confidence 2210 0 0111234567889999999999999999999999873
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-46 Score=376.23 Aligned_cols=262 Identities=26% Similarity=0.428 Sum_probs=215.6
Q ss_pred cccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhcc-----CCCCeeEEEE
Q 010013 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT-----GHRNIVELKG 135 (520)
Q Consensus 61 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~-----~hp~iv~l~~ 135 (520)
....+..+|.+.+.||+|+||.||+|.+..+++.||||++... ....+.+.+|+.+++.+. +|+||+++++
T Consensus 91 ~~~~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~ 166 (429)
T 3kvw_A 91 PHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE----KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLE 166 (429)
T ss_dssp TTCEETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEE
T ss_pred CCCcccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc----cchHHHHHHHHHHHHHHhhccccCCcCEEEEEe
Confidence 4456778899999999999999999999999999999998642 233466788999999885 3779999999
Q ss_pred EEEeCCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEe
Q 010013 136 AYEDRHSVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKAT 213 (520)
Q Consensus 136 ~~~~~~~~~lv~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~ 213 (520)
++.....+++||||+. ++|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||++.++ ...+||+
T Consensus 167 ~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~-~~~vkL~ 244 (429)
T 3kvw_A 167 NFTFRNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQG-RSGIKVI 244 (429)
T ss_dssp EEEETTEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTT-SCCEEEC
T ss_pred ecccCCeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCC-CcceEEe
Confidence 9999999999999995 68999887754 499999999999999999999999999999999999995321 1239999
Q ss_pred ecccccccCCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC---
Q 010013 214 DFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS--- 289 (520)
Q Consensus 214 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~--- 289 (520)
|||++..... ......||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+....+.+..+.......+
T Consensus 245 DFG~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~ 322 (429)
T 3kvw_A 245 DFGSSCYEHQ--RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKL 322 (429)
T ss_dssp CCTTCEETTC--CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHH
T ss_pred ecccceecCC--cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHH
Confidence 9999976543 2345689999999998864 589999999999999999999999999887766655542100000
Q ss_pred -----------------------------------------------CC-----CCCCCCHHHHHHHHHhcccCCCCCCC
Q 010013 290 -----------------------------------------------SD-----PWPNISSSAKDIVKKMLHADPKERLS 317 (520)
Q Consensus 290 -----------------------------------------------~~-----~~~~~~~~~~~li~~~l~~dp~~Rps 317 (520)
.. .....++.+.+||.+||..||++|||
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpt 402 (429)
T 3kvw_A 323 LDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMT 402 (429)
T ss_dssp HHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCC
T ss_pred HHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCC
Confidence 00 00123788999999999999999999
Q ss_pred HHHHHcCCccccC
Q 010013 318 AAEVLNHPWMRVD 330 (520)
Q Consensus 318 ~~~~l~~~~~~~~ 330 (520)
+.|+|+||||+..
T Consensus 403 a~e~L~Hpw~~~~ 415 (429)
T 3kvw_A 403 PGQALRHPWLRRR 415 (429)
T ss_dssp HHHHHTSTTTC--
T ss_pred HHHHhCChhhccC
Confidence 9999999999854
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-45 Score=358.79 Aligned_cols=264 Identities=24% Similarity=0.380 Sum_probs=211.1
Q ss_pred cccCCcccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEE
Q 010013 56 RVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKG 135 (520)
Q Consensus 56 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~ 135 (520)
...+...+...++|.+.+.||+|+||.||+|.+ +++.||+|++..... .....+.+.+|+.++++++ ||||+++++
T Consensus 26 ~~~~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-hp~iv~~~~ 101 (309)
T 3p86_A 26 AMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDF-HAERVNEFLREVAIMKRLR-HPNIVLFMG 101 (309)
T ss_dssp ------CBCCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCC-SHHHHHHHHHHHHHHHHCC-CTTBCCEEE
T ss_pred CCCcccccCChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCC-CHHHHHHHHHHHHHHHhCC-CCCEeeEEE
Confidence 344445555668899999999999999999987 478899999875432 3445677899999999998 999999999
Q ss_pred EEEeCCeEEEEEeccCCCchHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHcC--CeeecCCCCcEEeecCCCCCCe
Q 010013 136 AYEDRHSVNLIMDLCAGGELFDRIIAKGH---YSERAAANLCRQMVTVVHYCHSMG--VMHRDLKPENFLFSSSAEDSPL 210 (520)
Q Consensus 136 ~~~~~~~~~lv~e~~~g~~L~~~l~~~~~---l~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~ 210 (520)
++......++||||+++++|.+++...+. +++..+..++.||+.||.|||++| |+||||||+||++ +.++.+
T Consensus 102 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll---~~~~~~ 178 (309)
T 3p86_A 102 AVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLV---DKKYTV 178 (309)
T ss_dssp EECSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEE---CTTCCE
T ss_pred EEEECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEE---eCCCcE
Confidence 99999999999999999999999987653 999999999999999999999999 9999999999999 456789
Q ss_pred eEeecccccccCCCC-cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCC
Q 010013 211 KATDFGLSVFFKPGD-VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDF 288 (520)
Q Consensus 211 kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~ 288 (520)
||+|||+++...... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+.......
T Consensus 179 kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 258 (309)
T 3p86_A 179 KVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRL 258 (309)
T ss_dssp EECCCC-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCC
T ss_pred EECCCCCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCC
Confidence 999999998654322 2344679999999999865 48899999999999999999999999988887777665443332
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc--CCccc
Q 010013 289 SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN--HPWMR 328 (520)
Q Consensus 289 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~--~~~~~ 328 (520)
.. ...+++.+.++|.+||..||++|||+.++++ .++++
T Consensus 259 ~~--~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~ 298 (309)
T 3p86_A 259 EI--PRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK 298 (309)
T ss_dssp CC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred CC--CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 22 2478999999999999999999999999987 34443
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-46 Score=369.49 Aligned_cols=259 Identities=26% Similarity=0.388 Sum_probs=218.0
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~ 142 (520)
+...++|.+.+.||+|+||.||+|.+..+++.||+|++.... .....+.+.+|+.+++++. ||||+++++++...+.
T Consensus 29 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~ 105 (360)
T 3eqc_A 29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECN-SPYIVGFYGAFYSDGE 105 (360)
T ss_dssp CCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC--CHHHHHHHHHHHGGGGGCC-CTTBCCEEEEEEETTE
T ss_pred ccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc--CHHHHHHHHHHHHHHHHCC-CCCEEEEeEEEEECCE
Confidence 345678999999999999999999999999999999986542 3445677899999999998 9999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHc-CCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM-GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
.++||||++|++|.+++...+.+++..+..++.|++.||.|||+. ||+||||||+||+++ .++.+||+|||++...
T Consensus 106 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~~~~ 182 (360)
T 3eqc_A 106 ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN---SRGEIKLCDFGVSGQL 182 (360)
T ss_dssp EEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEEC---TTCCEEECCCCCCHHH
T ss_pred EEEEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEEC---CCCCEEEEECCCCccc
Confidence 999999999999999999888999999999999999999999996 999999999999994 5677999999998765
Q ss_pred CCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHH--------------------
Q 010013 222 KPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDA-------------------- 280 (520)
Q Consensus 222 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~-------------------- 280 (520)
... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||...........
T Consensus 183 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (360)
T 3eqc_A 183 IDS-MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG 261 (360)
T ss_dssp HHH-C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------
T ss_pred ccc-cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCC
Confidence 322 2234579999999999865 588999999999999999999999987665443222
Q ss_pred ----------------------HHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 281 ----------------------ILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 281 ----------------------~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
+..... +......++..+.+||.+||+.||++|||+.++|+||||+..
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 331 (360)
T 3eqc_A 262 RPLNKFGMDSRPPMAIFELLDYIVNEPP--PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 331 (360)
T ss_dssp ------------CCCHHHHHHHHHHSCC--CCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHH
T ss_pred CcccccccCCCCcccchhhhhHHhccCC--CCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcc
Confidence 111111 111223578999999999999999999999999999999854
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-46 Score=357.90 Aligned_cols=258 Identities=24% Similarity=0.302 Sum_probs=197.8
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
..++|.+.+.||+|+||.||+|.+..+++.||+|++..... .....+.+..+...++.+. ||||+++++++.+.+..+
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~~~~~~~~~-h~~iv~~~~~~~~~~~~~ 82 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN-SQEQKRLLMDLDISMRTVD-CPFTVTFYGALFREGDVW 82 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---C-HHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSSEE
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccC-cHHHHHHHHHHHHHHHhCC-CCeEEEEeeeeeccCCEE
Confidence 45789999999999999999999999999999999864321 1222233444444466665 999999999999999999
Q ss_pred EEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHc-CCeeecCCCCcEEeecCCCCCCeeEeeccccc
Q 010013 145 LIMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSM-GVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~----~~~l~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~ 219 (520)
+||||++| +|.+.+.. ...+++..+..++.||+.||.|||++ ||+||||||+||+++ .++.+||+|||++.
T Consensus 83 lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~~ 158 (290)
T 3fme_A 83 ICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLIN---ALGQVKMCDFGISG 158 (290)
T ss_dssp EEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEEC---TTCCEEBCCC----
T ss_pred EEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEEC---CCCCEEEeecCCcc
Confidence 99999975 87776643 56799999999999999999999998 999999999999994 56789999999998
Q ss_pred ccCCCCcccccccCCCccCchhhc-----ccCCCcchhHHHHHHHHHHhhCCCCCCC-CCHHHHHHHHHcCCCCCCCCCC
Q 010013 220 FFKPGDVFKDLVGSAYYVAPEVLR-----RNYGAEADIWSAGVILYILLSGVPPFWG-ETEQSIFDAILRGHIDFSSDPW 293 (520)
Q Consensus 220 ~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~Dv~slG~~l~~ll~g~~pf~~-~~~~~~~~~~~~~~~~~~~~~~ 293 (520)
............||+.|+|||++. ..++.++||||||+++|+|++|..||.. ................ ....
T Consensus 159 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~ 236 (290)
T 3fme_A 159 YLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSP--QLPA 236 (290)
T ss_dssp -----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCC--CCCT
T ss_pred cccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCC--Cccc
Confidence 776554445567999999999962 3478899999999999999999999986 3333333333333222 1122
Q ss_pred CCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 294 PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 294 ~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
..+++.+.+++.+||+.||++|||+.++++||||+..
T Consensus 237 ~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~ 273 (290)
T 3fme_A 237 DKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLH 273 (290)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred ccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccC
Confidence 4689999999999999999999999999999999754
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-47 Score=383.09 Aligned_cols=249 Identities=16% Similarity=0.192 Sum_probs=202.7
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhcc--CCCCeeEEE-------EE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT--GHRNIVELK-------GA 136 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~--~hp~iv~l~-------~~ 136 (520)
.++|.+.+.||+|+||.||+|.++.+|+.||||++...........+.+.+|+.+++.+. .||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 578999999999999999999999999999999997654445556788999995554443 399999998 77
Q ss_pred EEeCCe-----------------EEEEEeccCCCchHHHHHhcCCCCH-------HHHHHHHHHHHHHHHHHHHcCCeee
Q 010013 137 YEDRHS-----------------VNLIMDLCAGGELFDRIIAKGHYSE-------RAAANLCRQMVTVVHYCHSMGVMHR 192 (520)
Q Consensus 137 ~~~~~~-----------------~~lv~e~~~g~~L~~~l~~~~~l~~-------~~~~~i~~qi~~~l~~LH~~~ivH~ 192 (520)
+.+.+. .|+||||+ +|+|.+++...+.+++ ..+..++.||+.||.|||++||+||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHr 230 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHT 230 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 766543 88999999 6799999987655555 7888899999999999999999999
Q ss_pred cCCCCcEEeecCCCCCCeeEeecccccccCCCCcccccccCCCccCchhhcc------------cCCCcchhHHHHHHHH
Q 010013 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR------------NYGAEADIWSAGVILY 260 (520)
Q Consensus 193 Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~------------~~~~~~Dv~slG~~l~ 260 (520)
||||+|||++ .++.+||+|||+++... .......| +.|+|||++.+ .++.++|||||||++|
T Consensus 231 Dikp~NIll~---~~~~~kL~DFG~a~~~~--~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ 304 (377)
T 3byv_A 231 YLRPVDIVLD---QRGGVFLTGFEHLVRDG--ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIY 304 (377)
T ss_dssp CCCGGGEEEC---TTCCEEECCGGGCEETT--CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHH
T ss_pred CCCHHHEEEc---CCCCEEEEechhheecC--CcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHH
Confidence 9999999994 56789999999998643 23455678 99999999864 5899999999999999
Q ss_pred HHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcccc
Q 010013 261 ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 261 ~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
+|++|..||.+.........+. ..++.+++.+.+||.+||..||++|||+.++|+||||+.
T Consensus 305 elltg~~Pf~~~~~~~~~~~~~--------~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~ 365 (377)
T 3byv_A 305 WIWCADLPITKDAALGGSEWIF--------RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ 365 (377)
T ss_dssp HHHHSSCCC------CCSGGGG--------SSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHH
T ss_pred HHHHCCCCCcccccccchhhhh--------hhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHH
Confidence 9999999997655433222221 123578999999999999999999999999999999973
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-46 Score=369.50 Aligned_cols=261 Identities=30% Similarity=0.478 Sum_probs=216.3
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC---
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--- 140 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~--- 140 (520)
.+.++|.+.+.||+|+||.||+|.+..+++.||+|++.... .....+.+.+|+.+++++. ||||+++++++...
T Consensus 24 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~ 100 (364)
T 3qyz_A 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFR-HENIIGINDIIRAPTIE 100 (364)
T ss_dssp CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT--CHHHHHHHHHHHHHHHHCC-CTTBCCCCEEECCSSTT
T ss_pred cccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc--CcHHHHHHHHHHHHHHhcC-CCCCccceeEEecCCcc
Confidence 45578999999999999999999999999999999986422 3344577899999999998 99999999998764
Q ss_pred --CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccc
Q 010013 141 --HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218 (520)
Q Consensus 141 --~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a 218 (520)
...++||||+. ++|.+++.. +.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 101 ~~~~~~iv~e~~~-~~L~~~l~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~---~~~~~~kl~Dfg~a 175 (364)
T 3qyz_A 101 QMKDVYIVQDLME-TDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLA 175 (364)
T ss_dssp TCCCEEEEEECCS-EEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTC
T ss_pred ccceEEEEEcccC-cCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEE---CCCCCEEEEeCcce
Confidence 47899999996 589888765 579999999999999999999999999999999999999 45677999999999
Q ss_pred cccCCCC----cccccccCCCccCchhhc-c-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCC----
Q 010013 219 VFFKPGD----VFKDLVGSAYYVAPEVLR-R-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDF---- 288 (520)
Q Consensus 219 ~~~~~~~----~~~~~~gt~~y~aPE~~~-~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~---- 288 (520)
....... ......||+.|+|||++. + .++.++|||||||++|+|++|..||.+....+....+.......
T Consensus 176 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 255 (364)
T 3qyz_A 176 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255 (364)
T ss_dssp EECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHH
T ss_pred EecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence 8764322 124458999999999864 3 48999999999999999999999998887655555543211000
Q ss_pred -------------------CC----CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 289 -------------------SS----DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 289 -------------------~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
.. ..++.++..+.+||.+||..||++|||+.|+|+||||+....
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~ 322 (364)
T 3qyz_A 256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 322 (364)
T ss_dssp HHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTTCC
T ss_pred HHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhccC
Confidence 00 012467899999999999999999999999999999986533
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-45 Score=368.99 Aligned_cols=265 Identities=26% Similarity=0.419 Sum_probs=217.7
Q ss_pred cCCcccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCC-----eeE
Q 010013 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN-----IVE 132 (520)
Q Consensus 58 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~-----iv~ 132 (520)
.....+.+.++|.+.+.||+|+||+||+|.+..+++.||||++... ......+.+|+.+++.+..|++ |++
T Consensus 45 ~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~ 120 (382)
T 2vx3_A 45 IVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK----KAFLNQAQIEVRLLELMNKHDTEMKYYIVH 120 (382)
T ss_dssp CCCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHCSSGGGGGBCC
T ss_pred EeecCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc----HHHHHHHHHHHHHHHHHHhcccccceeEEE
Confidence 3345566788999999999999999999999999999999998642 2345677889999998875664 999
Q ss_pred EEEEEEeCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH--HcCCeeecCCCCcEEeecCCCCC
Q 010013 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCH--SMGVMHRDLKPENFLFSSSAEDS 208 (520)
Q Consensus 133 l~~~~~~~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH--~~~ivH~Dlkp~NIll~~~~~~~ 208 (520)
+++++...+..++||||+. ++|.+++... +.+++..+..++.||+.||.||| +.||+||||||+|||+.. +.++
T Consensus 121 ~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~-~~~~ 198 (382)
T 2vx3_A 121 LKRHFMFRNHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCN-PKRS 198 (382)
T ss_dssp EEEEEEETTEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESS-TTSC
T ss_pred eeeeeccCCceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEec-CCCC
Confidence 9999999999999999996 5999998775 46999999999999999999999 579999999999999953 2356
Q ss_pred CeeEeecccccccCCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCC
Q 010013 209 PLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID 287 (520)
Q Consensus 209 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~ 287 (520)
.+||+|||++..... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+......
T Consensus 199 ~~kL~DFG~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~ 276 (382)
T 2vx3_A 199 AIKIVDFGSSCQLGQ--RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGI 276 (382)
T ss_dssp CEEECCCTTCEETTC--CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCS
T ss_pred cEEEEeccCceeccc--ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 799999999987643 2345689999999999865 5899999999999999999999999998887776665432110
Q ss_pred CC------------------CCCC-----------------CC-------------------------CCHHHHHHHHHh
Q 010013 288 FS------------------SDPW-----------------PN-------------------------ISSSAKDIVKKM 307 (520)
Q Consensus 288 ~~------------------~~~~-----------------~~-------------------------~~~~~~~li~~~ 307 (520)
.+ ...| .. .++.+.+||.+|
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~m 356 (382)
T 2vx3_A 277 PPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRM 356 (382)
T ss_dssp CCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHh
Confidence 00 0000 00 013789999999
Q ss_pred cccCCCCCCCHHHHHcCCccccC
Q 010013 308 LHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 308 l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
|..||++|||+.|+|+||||+..
T Consensus 357 L~~dP~~Rpta~e~L~hp~f~~~ 379 (382)
T 2vx3_A 357 LDYDPKTRIQPYYALQHSFFKKT 379 (382)
T ss_dssp TCSCTTTSCCHHHHTTSGGGCC-
T ss_pred cCCChhhCCCHHHHhcCcccccC
Confidence 99999999999999999999854
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-45 Score=357.59 Aligned_cols=259 Identities=27% Similarity=0.533 Sum_probs=218.3
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccC-CcccHHHHHHHHHHHHhccCCCCeeEEEEEEE--eCC
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI-NRDDVEDVRREVQIMHHLTGHRNIVELKGAYE--DRH 141 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~--~~~ 141 (520)
+.++|.+++.||+|+||.||+|.+..+++.+|+|++...... .....+.+.+|+.++++++ ||||+++++++. ...
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~ 81 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLR-HKNVIQLVDVLYNEEKQ 81 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCC-CTTBCCEEEEEECC---
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcC-CCCeeEEEEEEEcCCCC
Confidence 457899999999999999999999999999999998754321 1234577899999999998 999999999984 456
Q ss_pred eEEEEEeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccc
Q 010013 142 SVNLIMDLCAGGELFDRIIA--KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~l~~--~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~ 219 (520)
..++||||+.++ |.+.+.. ...+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||++.
T Consensus 82 ~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~---~~~~~kl~dfg~~~ 157 (305)
T 2wtk_C 82 KMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLT---TGGTLKISALGVAE 157 (305)
T ss_dssp CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCCTTCE
T ss_pred eEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEc---CCCcEEeecccccc
Confidence 899999999876 7777765 45699999999999999999999999999999999999994 56789999999998
Q ss_pred ccCCC---CcccccccCCCccCchhhccc---CCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCC
Q 010013 220 FFKPG---DVFKDLVGSAYYVAPEVLRRN---YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPW 293 (520)
Q Consensus 220 ~~~~~---~~~~~~~gt~~y~aPE~~~~~---~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 293 (520)
..... .......||+.|+|||++.+. ++.++||||||+++|+|++|..||.+.........+..+...++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~---- 233 (305)
T 2wtk_C 158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIP---- 233 (305)
T ss_dssp ECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCC----
T ss_pred ccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCCCCC----
Confidence 76432 223345789999999998642 46789999999999999999999999988888888877765443
Q ss_pred CCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 294 PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 294 ~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
..++..+.++|.+||..||++|||+.++++||||+....
T Consensus 234 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~ 272 (305)
T 2wtk_C 234 GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP 272 (305)
T ss_dssp SSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCC
T ss_pred CccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCCC
Confidence 367899999999999999999999999999999976543
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-46 Score=374.49 Aligned_cols=262 Identities=27% Similarity=0.479 Sum_probs=196.9
Q ss_pred cccccceee-cceeeccCCeEEEEEEEc--CCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 010013 63 EDVRNTYIF-GRELGRGQFGVTYLVTHK--DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (520)
Q Consensus 63 ~~~~~~y~~-~~~lg~G~~g~Vy~~~~~--~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~ 139 (520)
..+.+.|.+ +++||+|+||.||+|.++ .+++.||+|++.... ....+.+|+.+|+++. ||||+++++++..
T Consensus 16 ~~~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~E~~~l~~l~-hpniv~~~~~~~~ 89 (405)
T 3rgf_A 16 ERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG-----ISMSACREIALLRELK-HPNVISLQKVFLS 89 (405)
T ss_dssp CCHHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS-----CCHHHHHHHHHHHHCC-CTTBCCCCEEEEE
T ss_pred hhhhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC-----CCHHHHHHHHHHHhcC-CCCeeeEeeEEec
Confidence 345677887 568999999999999976 468899999986432 2356789999999998 9999999999954
Q ss_pred --CCeEEEEEeccCCCchHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecC-CCC
Q 010013 140 --RHSVNLIMDLCAGGELFDRIIAK---------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSS-AED 207 (520)
Q Consensus 140 --~~~~~lv~e~~~g~~L~~~l~~~---------~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~-~~~ 207 (520)
...+++||||+. ++|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||+... +.+
T Consensus 90 ~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~ 168 (405)
T 3rgf_A 90 HADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPER 168 (405)
T ss_dssp TTTTEEEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTT
T ss_pred CCCCeEEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCC
Confidence 778999999996 4887777532 249999999999999999999999999999999999999643 356
Q ss_pred CCeeEeecccccccCCC----CcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHH------
Q 010013 208 SPLKATDFGLSVFFKPG----DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQ------ 275 (520)
Q Consensus 208 ~~~kl~Dfg~a~~~~~~----~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~------ 275 (520)
+.+||+|||++...... .......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....
T Consensus 169 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~ 248 (405)
T 3rgf_A 169 GRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNP 248 (405)
T ss_dssp TCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CC
T ss_pred CcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCcccccccccc
Confidence 78999999999876432 22345679999999998864 4899999999999999999999999766542
Q ss_pred ---HHHHHHHcCCCCCCCCCCC----------------------------------CCCHHHHHHHHHhcccCCCCCCCH
Q 010013 276 ---SIFDAILRGHIDFSSDPWP----------------------------------NISSSAKDIVKKMLHADPKERLSA 318 (520)
Q Consensus 276 ---~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~li~~~l~~dp~~Rps~ 318 (520)
+.+..+...........|. ..+..+.+||.+||..||++|||+
T Consensus 249 ~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta 328 (405)
T 3rgf_A 249 YHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITS 328 (405)
T ss_dssp CCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCH
T ss_pred chHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCH
Confidence 3333332211111111111 226789999999999999999999
Q ss_pred HHHHcCCccccCC
Q 010013 319 AEVLNHPWMRVDG 331 (520)
Q Consensus 319 ~~~l~~~~~~~~~ 331 (520)
.|+|+||||....
T Consensus 329 ~e~L~hp~f~~~~ 341 (405)
T 3rgf_A 329 EQAMQDPYFLEDP 341 (405)
T ss_dssp HHHHTSGGGTSSS
T ss_pred HHHhcChhhccCC
Confidence 9999999998653
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-45 Score=355.69 Aligned_cols=258 Identities=26% Similarity=0.449 Sum_probs=215.4
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
...++|.+.+.||+|+||.||+|.+..+|+.||+|++.... ..+.+.+|+.+++++. ||||+++++++...+..
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 99 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-----DLQEIIKEISIMQQCD-SPHVVKYYGSYFKNTDL 99 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-----CCHHHHHHHHHHHTCC-CTTBCCEEEEEEETTEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-----HHHHHHHHHHHHHhCC-CCCCccEEEEEEeCCEE
Confidence 34578999999999999999999999999999999986432 3467889999999998 99999999999999999
Q ss_pred EEEEeccCCCchHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 144 NLIMDLCAGGELFDRII-AKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~-~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
++||||+++++|.+++. ....+++..+..++.||+.||.|||+.|++|+||||+||+++ .++.+||+|||++....
T Consensus 100 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~kl~dfg~~~~~~ 176 (314)
T 3com_A 100 WIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLN---TEGHAKLADFGVAGQLT 176 (314)
T ss_dssp EEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTCEECB
T ss_pred EEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEEC---CCCCEEEeecccchhhh
Confidence 99999999999999886 456799999999999999999999999999999999999994 56789999999998764
Q ss_pred CCC-cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHH
Q 010013 223 PGD-VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300 (520)
Q Consensus 223 ~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (520)
... ......|++.|+|||++.+ .++.++||||||+++|+|++|..||...........+....... ......++..+
T Consensus 177 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l 255 (314)
T 3com_A 177 DTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPT-FRKPELWSDNF 255 (314)
T ss_dssp TTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCC-CSSGGGSCHHH
T ss_pred hhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcc-cCCcccCCHHH
Confidence 332 2344578999999999865 48899999999999999999999999887766655554443221 11224578999
Q ss_pred HHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 301 ~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
.++|.+||..||++|||+.++|+||||+...
T Consensus 256 ~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~ 286 (314)
T 3com_A 256 TDFVKQCLVKSPEQRATATQLLQHPFVRSAK 286 (314)
T ss_dssp HHHHHHHTCSCTTTSCCHHHHTTSHHHHTCC
T ss_pred HHHHHHHccCChhhCcCHHHHHhCHHHhcCC
Confidence 9999999999999999999999999998543
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-46 Score=371.08 Aligned_cols=261 Identities=23% Similarity=0.453 Sum_probs=223.0
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCccc--------------HHHHHHHHHHHHhccCCC
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDD--------------VEDVRREVQIMHHLTGHR 128 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~--------------~~~~~~e~~~l~~l~~hp 128 (520)
....++|.+.+.||+|+||.||+|.+ +++.||+|++.......... .+.+.+|+.+++++. ||
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~ 103 (348)
T 2pml_X 27 DKYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIK-NE 103 (348)
T ss_dssp CEEETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCC-CT
T ss_pred ccccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCC-CC
Confidence 34567899999999999999999999 78999999987544322222 278999999999998 99
Q ss_pred CeeEEEEEEEeCCeEEEEEeccCCCchHHH------HHh--cCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeecCCCCcE
Q 010013 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDR------IIA--KGHYSERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENF 199 (520)
Q Consensus 129 ~iv~l~~~~~~~~~~~lv~e~~~g~~L~~~------l~~--~~~l~~~~~~~i~~qi~~~l~~LH~-~~ivH~Dlkp~NI 199 (520)
||+++++++.+.+..++||||+++++|.++ +.. ...+++..+..++.||+.||.|||+ +||+||||||+||
T Consensus 104 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Ni 183 (348)
T 2pml_X 104 YCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNI 183 (348)
T ss_dssp TBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGE
T ss_pred CcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhE
Confidence 999999999999999999999999999988 655 5679999999999999999999999 9999999999999
Q ss_pred EeecCCCCCCeeEeecccccccCCCCcccccccCCCccCchhhccc--CCC-cchhHHHHHHHHHHhhCCCCCCCCCH-H
Q 010013 200 LFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRN--YGA-EADIWSAGVILYILLSGVPPFWGETE-Q 275 (520)
Q Consensus 200 ll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~-~~Dv~slG~~l~~ll~g~~pf~~~~~-~ 275 (520)
++ +.++.+||+|||.+...... ......|++.|+|||++.+. ++. ++||||||+++|+|++|..||..... .
T Consensus 184 l~---~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~ 259 (348)
T 2pml_X 184 LM---DKNGRVKLSDFGESEYMVDK-KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLV 259 (348)
T ss_dssp EE---CTTSCEEECCCTTCEECBTT-EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSH
T ss_pred EE---cCCCcEEEeccccccccccc-cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHH
Confidence 99 45678999999999876443 34556799999999998754 445 89999999999999999999988776 7
Q ss_pred HHHHHHHcCCCCCCCCC---------------CCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 276 SIFDAILRGHIDFSSDP---------------WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 276 ~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
+....+..+...++... ...++..+.+||.+||+.||.+|||+.++|+||||+..
T Consensus 260 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~ 329 (348)
T 2pml_X 260 ELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADT 329 (348)
T ss_dssp HHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTC
T ss_pred HHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCC
Confidence 77777776655544211 14689999999999999999999999999999999853
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-45 Score=367.49 Aligned_cols=259 Identities=21% Similarity=0.296 Sum_probs=220.1
Q ss_pred ccccceeecceeeccCCeEEEEEEE-----cCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTH-----KDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE 138 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~ 138 (520)
...++|.+++.||+|+||.||+|.+ ..+++.||||++... ........+.+|+.++++++ ||||+++++++.
T Consensus 68 ~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~ 144 (367)
T 3l9p_A 68 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKFN-HQNIVRCIGVSL 144 (367)
T ss_dssp CCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSS--CCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEC
T ss_pred cCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccc--cChhhHHHHHHHHHHHHhCC-CCCCCeEEEEEe
Confidence 3457899999999999999999994 456788999998532 23344567889999999998 999999999999
Q ss_pred eCCeEEEEEeccCCCchHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCee
Q 010013 139 DRHSVNLIMDLCAGGELFDRIIAKG-------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLK 211 (520)
Q Consensus 139 ~~~~~~lv~e~~~g~~L~~~l~~~~-------~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~k 211 (520)
.....++||||++||+|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++.++.+..+|
T Consensus 145 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~k 224 (367)
T 3l9p_A 145 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAK 224 (367)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEE
T ss_pred cCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEE
Confidence 9999999999999999999997653 489999999999999999999999999999999999997655667799
Q ss_pred EeecccccccCCC---CcccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCC
Q 010013 212 ATDFGLSVFFKPG---DVFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHI 286 (520)
Q Consensus 212 l~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~ 286 (520)
|+|||+++..... .......||+.|+|||++. +.++.++|||||||++|+|++ |..||.+....+....+..+..
T Consensus 225 L~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~ 304 (367)
T 3l9p_A 225 IGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR 304 (367)
T ss_dssp ECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCC
T ss_pred ECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC
Confidence 9999999754211 1223456789999999885 568999999999999999998 9999999999888888877654
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccc
Q 010013 287 DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (520)
Q Consensus 287 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~ 328 (520)
... ...++..+.+|+.+||+.||++|||+.+++++.++.
T Consensus 305 ~~~---~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~ 343 (367)
T 3l9p_A 305 MDP---PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 343 (367)
T ss_dssp CCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCC---CccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 322 246789999999999999999999999999987654
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-45 Score=352.24 Aligned_cols=257 Identities=26% Similarity=0.477 Sum_probs=220.0
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe--CCeE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED--RHSV 143 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~--~~~~ 143 (520)
.++|.+.+.||+|+||.||+|.++.+++.||+|++..... .....+.+.+|+.++++++ ||||+++++++.+ ....
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~ 82 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLRELK-HPNIVRYYDRIIDRTNTTL 82 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEEGGGTEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccC-CHHHHHHHHHHHHHHHhcC-CCCCCeEEEEEecCCCceE
Confidence 4689999999999999999999999999999999875432 3445677999999999998 9999999998754 6789
Q ss_pred EEEEeccCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHcC-----CeeecCCCCcEEeecCCCCCCeeEee
Q 010013 144 NLIMDLCAGGELFDRIIAK----GHYSERAAANLCRQMVTVVHYCHSMG-----VMHRDLKPENFLFSSSAEDSPLKATD 214 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~----~~l~~~~~~~i~~qi~~~l~~LH~~~-----ivH~Dlkp~NIll~~~~~~~~~kl~D 214 (520)
++||||+++++|.+++... ..+++..+..++.||+.||.|||+.| |+||||||+||++ +.++.+||+|
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~---~~~~~~kl~d 159 (279)
T 2w5a_A 83 YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL---DGKQNVKLGD 159 (279)
T ss_dssp EEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEE---CSSSCEEECC
T ss_pred EEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEE---cCCCCEEEec
Confidence 9999999999999998753 34999999999999999999999999 9999999999999 4567899999
Q ss_pred cccccccCCCCc-ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCC
Q 010013 215 FGLSVFFKPGDV-FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292 (520)
Q Consensus 215 fg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 292 (520)
||++........ .....|++.|+|||++.+ .++.++||||||+++|+|++|..||...........+..+.....
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~--- 236 (279)
T 2w5a_A 160 FGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRI--- 236 (279)
T ss_dssp CCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC---
T ss_pred CchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcccccC---
Confidence 999987654322 234578999999999865 588999999999999999999999999888888887777654322
Q ss_pred CCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 293 ~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
...++..+.++|.+||+.||++|||+.++|+|+|+...
T Consensus 237 ~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~ 274 (279)
T 2w5a_A 237 PYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEH 274 (279)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGG
T ss_pred CcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhh
Confidence 24678999999999999999999999999999999754
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-45 Score=357.48 Aligned_cols=263 Identities=25% Similarity=0.391 Sum_probs=216.8
Q ss_pred ccccceeecceeeccCCeEEEEEEEc-CCCcEEEEEEecccccCCcccHHHHHHHHHHHHhcc--CCCCeeEEEEEEE--
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHK-DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT--GHRNIVELKGAYE-- 138 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~--~hp~iv~l~~~~~-- 138 (520)
...++|.+.+.||+|+||.||+|.+. .+++.||+|++...... ......+.+|+.+++.+. .||||+++++++.
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~ 86 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE-EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS 86 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCT-TSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCccc-ccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeec
Confidence 34578999999999999999999995 67889999998654321 122235667888887773 4999999999987
Q ss_pred ---eCCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEe
Q 010013 139 ---DRHSVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKAT 213 (520)
Q Consensus 139 ---~~~~~~lv~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~ 213 (520)
.....++||||+. ++|.+++.... .+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~---~~~~~kl~ 162 (326)
T 1blx_A 87 RTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVT---SSGQIKLA 162 (326)
T ss_dssp ECSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTCCEEEC
T ss_pred ccCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEc---CCCCEEEe
Confidence 5677999999997 59999987753 499999999999999999999999999999999999994 56789999
Q ss_pred ecccccccCCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCC-----
Q 010013 214 DFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID----- 287 (520)
Q Consensus 214 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~----- 287 (520)
|||++.............||+.|+|||++.+ .++.++||||||+++|+|++|..||.+.........+......
T Consensus 163 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 242 (326)
T 1blx_A 163 DFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED 242 (326)
T ss_dssp SCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGG
T ss_pred cCcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCccc
Confidence 9999987654444456689999999998864 5899999999999999999999999998887766666431100
Q ss_pred C------------------CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 288 F------------------SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 288 ~------------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
+ ....++.++..+.+||.+||..||++|||+.++|+||||+...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~ 304 (326)
T 1blx_A 243 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLE 304 (326)
T ss_dssp SCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred CccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccccc
Confidence 0 0012246889999999999999999999999999999998654
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-45 Score=358.55 Aligned_cols=250 Identities=20% Similarity=0.351 Sum_probs=213.2
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCc---EEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQ---QFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~---~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~ 141 (520)
..++|.+.+.||+|+||.||+|.+..++. .||||++.... .....+.+.+|+.++++++ ||||+++++++.+.+
T Consensus 47 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~ 123 (325)
T 3kul_A 47 EASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY--TERQRRDFLSEASIMGQFD-HPNIIRLEGVVTRGR 123 (325)
T ss_dssp CGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC--CHHHHHHHHHHHHHHTTCC-CTTBCCEEEEECGGG
T ss_pred ChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC--CHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEEeCC
Confidence 45789999999999999999999986554 49999986432 3345577899999999998 999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccc
Q 010013 142 SVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 220 (520)
..++||||++|++|.+++... +.+++..+..++.||+.||.|||+.||+||||||+|||+ +.++.+||+|||++..
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~~ 200 (325)
T 3kul_A 124 LAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLV---DSNLVCKVSDFGLSRV 200 (325)
T ss_dssp CCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCSSCEE
T ss_pred ccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEE---CCCCCEEECCCCcccc
Confidence 999999999999999999654 579999999999999999999999999999999999999 4567899999999987
Q ss_pred cCCCC----cccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCC
Q 010013 221 FKPGD----VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWP 294 (520)
Q Consensus 221 ~~~~~----~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (520)
..... ......+|+.|+|||++. ..++.++|||||||++|+|++ |..||.+.........+..+.... ...
T Consensus 201 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~ 277 (325)
T 3kul_A 201 LEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLP---APM 277 (325)
T ss_dssp CC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCC---CCT
T ss_pred cccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCCC---CCC
Confidence 64332 112234577899999986 458899999999999999999 999999999888888877663322 224
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 295 NISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 295 ~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.++..+.++|.+||..||++|||+.++++
T Consensus 278 ~~~~~l~~li~~~l~~dp~~Rps~~eil~ 306 (325)
T 3kul_A 278 GCPHALHQLMLDCWHKDRAQRPRFSQIVS 306 (325)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CcCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 78999999999999999999999999986
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-45 Score=366.64 Aligned_cols=262 Identities=30% Similarity=0.465 Sum_probs=214.8
Q ss_pred CCcccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 010013 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE 138 (520)
Q Consensus 59 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~ 138 (520)
......+.++|.+.+.||+|+||.||+|.++.+|+.||+|++.... ......+.+.+|+.++++++ ||||+++++++.
T Consensus 34 ~~~~~~l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~ 111 (371)
T 4exu_A 34 NKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHMQ-HENVIGLLDVFT 111 (371)
T ss_dssp TTEEEEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTT-SSHHHHHHHHHHHHHHHHCC-CTTBCCCSEEEC
T ss_pred ccceecccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccc-cchhHHHHHHHHHHHHHhcC-CCCchhhhhhee
Confidence 3444557789999999999999999999999999999999986532 23344677889999999998 999999999998
Q ss_pred eCCeE------EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeE
Q 010013 139 DRHSV------NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKA 212 (520)
Q Consensus 139 ~~~~~------~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl 212 (520)
..+.. ++||||+. ++|.+.+. ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||
T Consensus 112 ~~~~~~~~~~~~lv~e~~~-~~l~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll---~~~~~~kL 185 (371)
T 4exu_A 112 PASSLRNFYDFYLVMPFMQ-TDLQKIMG--MEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV---NEDCELKI 185 (371)
T ss_dssp SCSSSTTCCCCEEEEECCC-EEHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEE
T ss_pred ccCCcccceeEEEEEcccc-ccHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEE---CCCCCEEE
Confidence 76654 99999996 58877663 459999999999999999999999999999999999999 45678999
Q ss_pred eecccccccCCCCcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCC---
Q 010013 213 TDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID--- 287 (520)
Q Consensus 213 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~--- 287 (520)
+|||++..... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+......
T Consensus 186 ~Dfg~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 263 (371)
T 4exu_A 186 LDFGLARHADA--EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGT 263 (371)
T ss_dssp CSTTCC----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCH
T ss_pred EecCccccccc--CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcH
Confidence 99999986543 2345678999999998864 5899999999999999999999999988876666555331100
Q ss_pred --------------------CCC----CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 288 --------------------FSS----DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 288 --------------------~~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
... ..++.+++.+.+||.+||+.||++|||+.|+|+||||+..
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 330 (371)
T 4exu_A 264 EFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF 330 (371)
T ss_dssp HHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred HHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccC
Confidence 000 0124678999999999999999999999999999999854
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-46 Score=373.12 Aligned_cols=257 Identities=17% Similarity=0.178 Sum_probs=196.3
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhcc-CCCCeeEEE-------EEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT-GHRNIVELK-------GAYE 138 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~-~hp~iv~l~-------~~~~ 138 (520)
..|.+.+.||+|+||.||+|.+..+++.||+|++...........+.+.+|+.+++.|. .||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 45999999999999999999999999999999998755434455677888866555554 399988855 5554
Q ss_pred eC-----------------CeEEEEEeccCCCchHHHHHhc-CCCCHHHH------HHHHHHHHHHHHHHHHcCCeeecC
Q 010013 139 DR-----------------HSVNLIMDLCAGGELFDRIIAK-GHYSERAA------ANLCRQMVTVVHYCHSMGVMHRDL 194 (520)
Q Consensus 139 ~~-----------------~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~------~~i~~qi~~~l~~LH~~~ivH~Dl 194 (520)
.. ..+|+||||++ ++|.+++... ..++...+ ..++.||+.||.|||++||+||||
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDi 220 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHF 220 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTC
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcC
Confidence 43 34899999998 8999999764 34555555 677899999999999999999999
Q ss_pred CCCcEEeecCCCCCCeeEeecccccccCCCCcccccccCCCccCchhhcc---cCCCcchhHHHHHHHHHHhhCCCCCCC
Q 010013 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR---NYGAEADIWSAGVILYILLSGVPPFWG 271 (520)
Q Consensus 195 kp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~Dv~slG~~l~~ll~g~~pf~~ 271 (520)
||+|||++ .++.+||+|||+++..... .....+|+.|+|||++.+ .++.++|||||||++|+|++|..||.+
T Consensus 221 kp~NIll~---~~~~~kL~DFG~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~ 295 (371)
T 3q60_A 221 TPDNLFIM---PDGRLMLGDVSALWKVGTR--GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGL 295 (371)
T ss_dssp SGGGEEEC---TTSCEEECCGGGEEETTCE--EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTB
T ss_pred CHHHEEEC---CCCCEEEEecceeeecCCC--ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCC
Confidence 99999994 5678999999999876432 224567799999999864 589999999999999999999999987
Q ss_pred CCHHHHH--HH---HHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcccc
Q 010013 272 ETEQSIF--DA---ILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 272 ~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
....... .. .......+....++.+++.+.+||.+||+.||++|||+.++|+||||+.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~ 358 (371)
T 3q60_A 296 VTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQ 358 (371)
T ss_dssp CCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHH
T ss_pred cCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHH
Confidence 6432100 00 0111122233334588999999999999999999999999999999974
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-45 Score=358.61 Aligned_cols=263 Identities=25% Similarity=0.396 Sum_probs=216.6
Q ss_pred CcccccccceeecceeeccCCeEEEEEEE-cCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCC------CeeE
Q 010013 60 KPMEDVRNTYIFGRELGRGQFGVTYLVTH-KDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR------NIVE 132 (520)
Q Consensus 60 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp------~iv~ 132 (520)
...+.+.++|.+.+.||+|+||.||+|.+ +.+++.||+|++... ....+.+.+|+.+++.+. |+ +|++
T Consensus 7 ~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~-~~~~~~~~~i~~ 81 (339)
T 1z57_A 7 QSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV----DRYCEAARSEIQVLEHLN-TTDPNSTFRCVQ 81 (339)
T ss_dssp STTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHH-HHCTTCTTCBCC
T ss_pred ecCCCccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC----CchhHHHHHHHHHHHHhh-hcCCCCceeeEe
Confidence 34556778999999999999999999998 567899999998542 234567889999999987 54 5999
Q ss_pred EEEEEEeCCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCC----
Q 010013 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAE---- 206 (520)
Q Consensus 133 l~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~---- 206 (520)
+++++...+..++||||+ +++|.+++...+ ++++..+..++.||+.||.|||++||+||||||+|||++..+.
T Consensus 82 ~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~ 160 (339)
T 1z57_A 82 MLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAY 160 (339)
T ss_dssp EEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEE
T ss_pred eecccccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEecccccccc
Confidence 999999999999999999 889999998765 6899999999999999999999999999999999999964221
Q ss_pred ------------CCCeeEeecccccccCCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCC
Q 010013 207 ------------DSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGET 273 (520)
Q Consensus 207 ------------~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~ 273 (520)
++.+||+|||++..... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||....
T Consensus 161 ~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 238 (339)
T 1z57_A 161 NPKIKRDERTLINPDIKVVDFGSATYDDE--HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHD 238 (339)
T ss_dssp C----CEEEEESCCCEEECCCSSCEETTS--CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSC
T ss_pred CCccccccccccCCCceEeeCcccccCcc--ccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence 56799999999987543 2345679999999999865 58999999999999999999999999888
Q ss_pred HHHHHHHHHcCCCCCCC----------------------------------------CCCCCCCHHHHHHHHHhcccCCC
Q 010013 274 EQSIFDAILRGHIDFSS----------------------------------------DPWPNISSSAKDIVKKMLHADPK 313 (520)
Q Consensus 274 ~~~~~~~~~~~~~~~~~----------------------------------------~~~~~~~~~~~~li~~~l~~dp~ 313 (520)
..+....+......++. ......++.+.+||.+||+.||+
T Consensus 239 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~ 318 (339)
T 1z57_A 239 SKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPA 318 (339)
T ss_dssp HHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTT
T ss_pred hHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcc
Confidence 76655444321111110 00012346788999999999999
Q ss_pred CCCCHHHHHcCCccccC
Q 010013 314 ERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 314 ~Rps~~~~l~~~~~~~~ 330 (520)
+|||+.|+|+||||+..
T Consensus 319 ~Rpt~~ell~hp~f~~~ 335 (339)
T 1z57_A 319 KRITLREALKHPFFDLL 335 (339)
T ss_dssp TSCCHHHHTTSGGGGGG
T ss_pred cccCHHHHhcCHHHHHH
Confidence 99999999999999854
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-45 Score=358.14 Aligned_cols=260 Identities=28% Similarity=0.491 Sum_probs=197.9
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
..++|.+.+.||+|+||.||+|.+..+++.||+|++..... ....+.+.+|+.+++++. ||||+++++++...+..+
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 89 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC--QTSMDELLKEIQAMSQCH-HPNIVSYYTSFVVKDELW 89 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC------------------CCCCCC-CTTBCCEEEEEESSSCEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc--chhHHHHHHHHHHHhhcC-CCCEeeEEEEEeecCCcE
Confidence 45789999999999999999999998999999998864332 234567889999999998 999999999999999999
Q ss_pred EEEeccCCCchHHHHHh--------cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecc
Q 010013 145 LIMDLCAGGELFDRIIA--------KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~--------~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg 216 (520)
+||||++|++|.+++.. .+.+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||
T Consensus 90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~kl~dfg 166 (303)
T 2vwi_A 90 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLG---EDGSVQIADFG 166 (303)
T ss_dssp EEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEC---TTCCEEECCCH
T ss_pred EEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEc---CCCCEEEEecc
Confidence 99999999999998864 45699999999999999999999999999999999999994 56789999999
Q ss_pred cccccCCCC------cccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCC
Q 010013 217 LSVFFKPGD------VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDF 288 (520)
Q Consensus 217 ~a~~~~~~~------~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~ 288 (520)
++....... ......||+.|+|||++.+ .++.++||||||+++|+|++|..||...................
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 246 (303)
T 2vwi_A 167 VSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPS 246 (303)
T ss_dssp HHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCC
T ss_pred chheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCc
Confidence 987654321 1234578999999999863 58999999999999999999999998877655554444433221
Q ss_pred C------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 289 S------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 289 ~------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
. ......++..+.++|.+||+.||.+|||+.++++||||+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 294 (303)
T 2vwi_A 247 LETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA 294 (303)
T ss_dssp TTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC---
T ss_pred cccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhcC
Confidence 1 11235678999999999999999999999999999999854
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=359.44 Aligned_cols=264 Identities=28% Similarity=0.452 Sum_probs=216.4
Q ss_pred ccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC-
Q 010013 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR- 140 (520)
Q Consensus 62 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~- 140 (520)
...+.++|.+.+.||+|+||.||+|.+..+|+.||||++... ........+.+|+.+++++. ||||+++++++...
T Consensus 6 ~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~ 82 (353)
T 2b9h_A 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF--DKPLFALRTLREIKILKHFK-HENIITIFNIQRPDS 82 (353)
T ss_dssp CCCSCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC--SSHHHHHHHHHHHHHHHHCC-CTTBCCEEEECCCSC
T ss_pred ccccccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc--ccchHHHHHHHHHHHHHhCc-CCCcCCeeeeecccc
Confidence 345678899999999999999999999999999999998542 23344567889999999998 99999999987654
Q ss_pred ----CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecc
Q 010013 141 ----HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (520)
Q Consensus 141 ----~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg 216 (520)
...++||||+. ++|.+.+.. +.+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||
T Consensus 83 ~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~---~~~~~kl~Dfg 157 (353)
T 2b9h_A 83 FENFNEVYIIQELMQ-TDLHRVIST-QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLIN---SNCDLKVCDFG 157 (353)
T ss_dssp STTCCCEEEEECCCS-EEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC---TTCCEEECCCT
T ss_pred cCccceEEEEEeccC-ccHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEc---CCCcEEEEecc
Confidence 67999999996 589888765 5799999999999999999999999999999999999994 56789999999
Q ss_pred cccccCCCC-----------cccccccCCCccCchhhc--ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHc
Q 010013 217 LSVFFKPGD-----------VFKDLVGSAYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR 283 (520)
Q Consensus 217 ~a~~~~~~~-----------~~~~~~gt~~y~aPE~~~--~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~ 283 (520)
++....... ......||+.|+|||++. ..++.++|||||||++|+|++|..||.+.........+..
T Consensus 158 ~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~ 237 (353)
T 2b9h_A 158 LARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFG 237 (353)
T ss_dssp TCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred cccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHH
Confidence 998764321 122357899999999874 4588999999999999999999999998886655444322
Q ss_pred CC------------------------CCCCC----CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCCC
Q 010013 284 GH------------------------IDFSS----DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDA 333 (520)
Q Consensus 284 ~~------------------------~~~~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~~ 333 (520)
.. ...+. ..++.+++.+.+||.+||..||++|||+.++|+||||+.....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~ 315 (353)
T 2b9h_A 238 IIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDP 315 (353)
T ss_dssp HHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCT
T ss_pred HhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccCCc
Confidence 10 00000 0124688999999999999999999999999999999865443
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-45 Score=358.88 Aligned_cols=262 Identities=30% Similarity=0.484 Sum_probs=212.4
Q ss_pred ccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEE---
Q 010013 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE--- 138 (520)
Q Consensus 62 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~--- 138 (520)
...+.++|.+.+.||+|+||.||+|.+..+++.||+|++... .....+.+.+|+.+++++. ||||+++++++.
T Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~ 81 (320)
T 2i6l_A 6 GFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT---DPQSVKHALREIKIIRRLD-HDNIVKVFEILGPSG 81 (320)
T ss_dssp CEEETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC---SHHHHHHHHHHHHHHHTCC-CTTBCCEEEEECTTS
T ss_pred cCccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC---ChHHHHHHHHHHHHHHhcC-CCCeeEEEEeccccc
Confidence 455678999999999999999999999999999999998643 3445678899999999998 999999999873
Q ss_pred -----------eCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCC
Q 010013 139 -----------DRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAED 207 (520)
Q Consensus 139 -----------~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~ 207 (520)
.....++||||+. ++|.+++.. +++++..+..++.||+.||.|||++||+||||||+||+++. .+
T Consensus 82 ~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~--~~ 157 (320)
T 2i6l_A 82 SQLTDDVGSLTELNSVYIVQEYME-TDLANVLEQ-GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINT--ED 157 (320)
T ss_dssp CBCCC----CCSCSEEEEEEECCS-EEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEET--TT
T ss_pred cccccccccccccCceeEEeeccC-CCHHHHhhc-CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC--CC
Confidence 4478899999997 599888754 57999999999999999999999999999999999999963 35
Q ss_pred CCeeEeecccccccCCC----CcccccccCCCccCchhhc--ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHH
Q 010013 208 SPLKATDFGLSVFFKPG----DVFKDLVGSAYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAI 281 (520)
Q Consensus 208 ~~~kl~Dfg~a~~~~~~----~~~~~~~gt~~y~aPE~~~--~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~ 281 (520)
..+||+|||++...... .......+++.|+|||.+. ..++.++||||||+++|+|++|..||.+.........+
T Consensus 158 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 237 (320)
T 2i6l_A 158 LVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLI 237 (320)
T ss_dssp TEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred CeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 67999999999876432 1223456789999999875 45889999999999999999999999998877666655
Q ss_pred HcCCCCC----------------------CC----CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 282 LRGHIDF----------------------SS----DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 282 ~~~~~~~----------------------~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
....... +. ..++.++..+.++|.+||+.||++|||+.++|+||||+...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 313 (320)
T 2i6l_A 238 LESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYS 313 (320)
T ss_dssp HHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTC
T ss_pred HHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCccccccc
Confidence 4332110 00 01246899999999999999999999999999999998554
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-44 Score=361.38 Aligned_cols=254 Identities=26% Similarity=0.420 Sum_probs=217.4
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCC-------CcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEE
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDT-------KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKG 135 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~-------~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~ 135 (520)
+...++|.+++.||+|+||.||+|.+..+ +..||+|++... ......+.+.+|+.+++++..||||+++++
T Consensus 65 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~ 142 (382)
T 3tt0_A 65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKMIGKHKNIINLLG 142 (382)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT--CCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred ccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccc--cCHHHHHHHHHHHHHHHHhcCCchhhhhee
Confidence 34457899999999999999999997543 357999998654 234456778999999999955999999999
Q ss_pred EEEeCCeEEEEEeccCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcE
Q 010013 136 AYEDRHSVNLIMDLCAGGELFDRIIAKG----------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENF 199 (520)
Q Consensus 136 ~~~~~~~~~lv~e~~~g~~L~~~l~~~~----------------~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NI 199 (520)
++...+..++||||+++++|.+++.... .+++..+..++.||+.||.|||+.||+||||||+||
T Consensus 143 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NI 222 (382)
T 3tt0_A 143 ACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNV 222 (382)
T ss_dssp EECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGE
T ss_pred eeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceE
Confidence 9999999999999999999999998754 499999999999999999999999999999999999
Q ss_pred EeecCCCCCCeeEeecccccccCCCC---cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCH
Q 010013 200 LFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETE 274 (520)
Q Consensus 200 ll~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~ 274 (520)
|+ +.++.+||+|||++....... ......+|+.|+|||++.+ .++.++|||||||++|+|++ |..||.+...
T Consensus 223 ll---~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~ 299 (382)
T 3tt0_A 223 LV---TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 299 (382)
T ss_dssp EE---CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred EE---cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 99 456789999999998765432 2233467889999998864 58999999999999999999 9999999988
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 275 QSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
.+....+..+..... ...++..+.++|.+||+.||++|||+.+++++
T Consensus 300 ~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 346 (382)
T 3tt0_A 300 EELFKLLKEGHRMDK---PSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 346 (382)
T ss_dssp HHHHHHHHTTCCCCC---CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHcCCCCCC---CccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 888887776643322 24689999999999999999999999999874
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-45 Score=362.52 Aligned_cols=260 Identities=27% Similarity=0.369 Sum_probs=202.5
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe--
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS-- 142 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~-- 142 (520)
..++|.+.+.||+|+||.||+|.++.+++.||||++.... .......+++..+..+. ||||+++++++...+.
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~~~l~~l~-h~niv~~~~~~~~~~~~~ 95 (360)
T 3e3p_A 21 EMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP----RFRNRELQIMQDLAVLH-HPNIVQLQSYFYTLGERD 95 (360)
T ss_dssp HHTTEEEC----------CEEEEETTTCCEEEEEEEECCT----TCCCHHHHHHHHHHHHC-CTTBCCEEEEEEEECSSC
T ss_pred hccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc----cccHHHHHHHHHHHhcC-CCCcccHHHhhhcccccc
Confidence 3468999999999999999999999999999999885432 22345667888888887 9999999999865433
Q ss_pred -----EEEEEeccCCCchHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHH--HcCCeeecCCCCcEEeecCCCCCCee
Q 010013 143 -----VNLIMDLCAGGELFDRI----IAKGHYSERAAANLCRQMVTVVHYCH--SMGVMHRDLKPENFLFSSSAEDSPLK 211 (520)
Q Consensus 143 -----~~lv~e~~~g~~L~~~l----~~~~~l~~~~~~~i~~qi~~~l~~LH--~~~ivH~Dlkp~NIll~~~~~~~~~k 211 (520)
+++||||+++ +|...+ .....+++..+..++.||+.||.||| ++||+||||||+|||++. .++.+|
T Consensus 96 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~--~~~~~k 172 (360)
T 3e3p_A 96 RRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNE--ADGTLK 172 (360)
T ss_dssp TTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEET--TTTEEE
T ss_pred ccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeC--CCCcEE
Confidence 8899999987 444433 34567999999999999999999999 999999999999999962 356899
Q ss_pred EeecccccccCCCCcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC
Q 010013 212 ATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289 (520)
Q Consensus 212 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~ 289 (520)
|+|||++.............||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+.+.....+
T Consensus 173 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 252 (360)
T 3e3p_A 173 LCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPS 252 (360)
T ss_dssp ECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCC
T ss_pred EeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCC
Confidence 999999998766655566789999999998853 389999999999999999999999999887776666543110000
Q ss_pred ----------------------------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 290 ----------------------------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 290 ----------------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
.......+..+.+||.+||+.||++|||+.|+|+||||+....
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 323 (360)
T 3e3p_A 253 REVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHD 323 (360)
T ss_dssp HHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGC
T ss_pred HHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCC
Confidence 0011235688999999999999999999999999999986544
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-44 Score=360.89 Aligned_cols=264 Identities=23% Similarity=0.383 Sum_probs=208.1
Q ss_pred cccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccC--------CcccHHHHHHHHHHHHhccCCCCeeE
Q 010013 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI--------NRDDVEDVRREVQIMHHLTGHRNIVE 132 (520)
Q Consensus 61 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~--------~~~~~~~~~~e~~~l~~l~~hp~iv~ 132 (520)
....+.++|.+.+.||+|+||.||+|.+.. ++.||||++...... .....+.+.+|+.+++++. ||||++
T Consensus 16 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~ 93 (362)
T 3pg1_A 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFH-HPNILG 93 (362)
T ss_dssp HHHHTTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCC-CTTBCC
T ss_pred HHHHhccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCC-CcCccc
Confidence 345577899999999999999999999865 899999998653321 1122478899999999998 999999
Q ss_pred EEEEEEe-----CCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCC
Q 010013 133 LKGAYED-----RHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAE 206 (520)
Q Consensus 133 l~~~~~~-----~~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~ 206 (520)
+++++.. ...+++||||+. ++|.+.+... ..+++..+..++.||+.||.|||++||+||||||+||++ +.
T Consensus 94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~---~~ 169 (362)
T 3pg1_A 94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILL---AD 169 (362)
T ss_dssp CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CT
T ss_pred eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEE---cC
Confidence 9999843 347899999997 5888877654 369999999999999999999999999999999999999 45
Q ss_pred CCCeeEeecccccccCCCCcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC
Q 010013 207 DSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG 284 (520)
Q Consensus 207 ~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~ 284 (520)
++.+||+|||++.............||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+...
T Consensus 170 ~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~ 249 (362)
T 3pg1_A 170 NNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEV 249 (362)
T ss_dssp TCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred CCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 67799999999987655555556689999999998864 5899999999999999999999999998876666555321
Q ss_pred CC------------------------CCCCC----CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 285 HI------------------------DFSSD----PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 285 ~~------------------------~~~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
.. ..+.. ..+.+++.+.+||.+||+.||++|||+.++|+||||+..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 323 (362)
T 3pg1_A 250 VGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESL 323 (362)
T ss_dssp HCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTT
T ss_pred cCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhc
Confidence 10 11111 123568899999999999999999999999999999864
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-44 Score=350.99 Aligned_cols=253 Identities=25% Similarity=0.363 Sum_probs=207.6
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.++|.+.+.||+|+||.||+|.+..+++.||+|++...........+.+.+|+.+++++. ||||+++++++...+..++
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQ-EPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEETTEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcC-CCCeeEEEEEEeeCCeEEE
Confidence 467999999999999999999999999999999997654444445678999999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
||||++|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||++.......
T Consensus 112 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~---~~~~~kl~Dfg~~~~~~~~~ 188 (309)
T 2h34_A 112 DMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVS---ADDFAYLVDFGIASATTDEK 188 (309)
T ss_dssp EEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSCEEECSCCC--------
T ss_pred EEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEc---CCCCEEEecCccCccccccc
Confidence 999999999999999888999999999999999999999999999999999999994 56789999999988764332
Q ss_pred --cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHH
Q 010013 226 --VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (520)
Q Consensus 226 --~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (520)
......|++.|+|||++.+ .++.++||||||+++|+|++|..||.+.........+.. .........+.++..+.+
T Consensus 189 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~ 267 (309)
T 2h34_A 189 LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQ-AIPRPSTVRPGIPVAFDA 267 (309)
T ss_dssp --------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHS-CCCCGGGTSTTCCTHHHH
T ss_pred cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhcc-CCCCccccCCCCCHHHHH
Confidence 2234578999999999864 588999999999999999999999988776544444433 333333334678999999
Q ss_pred HHHHhcccCCCCCC-CHHHHHc
Q 010013 303 IVKKMLHADPKERL-SAAEVLN 323 (520)
Q Consensus 303 li~~~l~~dp~~Rp-s~~~~l~ 323 (520)
+|.+||..||++|| |++++++
T Consensus 268 li~~~l~~dP~~Rp~s~~~l~~ 289 (309)
T 2h34_A 268 VIARGMAKNPEDRYVTCGDLSA 289 (309)
T ss_dssp HHHHHTCSSGGGSCSSHHHHHH
T ss_pred HHHHhccCCHHHHHHhHHHHHH
Confidence 99999999999999 7777764
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-44 Score=351.07 Aligned_cols=255 Identities=28% Similarity=0.495 Sum_probs=209.7
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe-----
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED----- 139 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~----- 139 (520)
+.++|.+.+.||+|+||.||+|.+..+++.||+|++... ....+.+.+|+.+++++. ||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~ 78 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT----EEKLSTILSEVMLLASLN-HQYVVRYYAAWLERRNFV 78 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE----HHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEECCCCC
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc----HHHHHHHHHHHHHHHhcC-chHHHHHHHHHHhhcchh
Confidence 457899999999999999999999999999999998542 234577899999999998 9999999998765
Q ss_pred --------CCeEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCe
Q 010013 140 --------RHSVNLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPL 210 (520)
Q Consensus 140 --------~~~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~ 210 (520)
....++||||++|++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+||++ +.++.+
T Consensus 79 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~---~~~~~~ 155 (303)
T 1zy4_A 79 KPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFI---DESRNV 155 (303)
T ss_dssp C------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCE
T ss_pred hhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEE---cCCCCE
Confidence 467899999999999999998654 57889999999999999999999999999999999999 456789
Q ss_pred eEeecccccccCCC---------------CcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCC-
Q 010013 211 KATDFGLSVFFKPG---------------DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGE- 272 (520)
Q Consensus 211 kl~Dfg~a~~~~~~---------------~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~- 272 (520)
||+|||++...... .......|++.|+|||++.+ .++.++|||||||++|+|++ ||...
T Consensus 156 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~ 232 (303)
T 1zy4_A 156 KIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM 232 (303)
T ss_dssp EECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH
T ss_pred EEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch
Confidence 99999999875421 12234578999999999864 58899999999999999998 55432
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 273 TEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
........+......++.......+..+.++|.+||+.||++|||+.++++||||...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (303)
T 1zy4_A 233 ERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVK 290 (303)
T ss_dssp HHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCC
T ss_pred hHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCCC
Confidence 3344555566555555555556778899999999999999999999999999999743
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=352.44 Aligned_cols=261 Identities=23% Similarity=0.349 Sum_probs=197.1
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~ 142 (520)
....++|.+.+.||+|+||.||+|.++.+|+.||||++..... .....+.+..+..+++.+. ||||+++++++...+.
T Consensus 21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~~~~~~~~~-h~~i~~~~~~~~~~~~ 98 (318)
T 2dyl_A 21 QAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGN-KEENKRILMDLDVVLKSHD-CPYIVQCFGTFITNTD 98 (318)
T ss_dssp ECCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSC-HHHHHHHHHHHHHHHHTTT-CTTBCCEEEEEECSSE
T ss_pred hhhhccccccceeeecCCeeEEEEEEecCCeEEEEEEeccccc-chHHHHHHHHHHHHHHhcC-CCceeeEEEEEecCCc
Confidence 3345789999999999999999999999999999999865432 1122233444455566666 9999999999999999
Q ss_pred EEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHc-CCeeecCCCCcEEeecCCCCCCeeEeecccccc
Q 010013 143 VNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSM-GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 220 (520)
.++||||+ ++.+...... .+.+++..+..++.||+.||.|||+. ||+||||||+||++ +.++.+||+|||++..
T Consensus 99 ~~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~---~~~~~~kl~dfg~~~~ 174 (318)
T 2dyl_A 99 VFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL---DERGQIKLCDFGISGR 174 (318)
T ss_dssp EEEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEE---CTTSCEEECCCTTC--
T ss_pred EEEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEE---CCCCCEEEEECCCchh
Confidence 99999999 5555554443 46799999999999999999999995 99999999999999 4567899999999987
Q ss_pred cCCCCcccccccCCCccCchhhc------ccCCCcchhHHHHHHHHHHhhCCCCCCC-CCHHHHHHHHHcCCCCCCCCCC
Q 010013 221 FKPGDVFKDLVGSAYYVAPEVLR------RNYGAEADIWSAGVILYILLSGVPPFWG-ETEQSIFDAILRGHIDFSSDPW 293 (520)
Q Consensus 221 ~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~Dv~slG~~l~~ll~g~~pf~~-~~~~~~~~~~~~~~~~~~~~~~ 293 (520)
...........|++.|+|||++. ..++.++||||||+++|+|++|..||.. .........+......... ..
T Consensus 175 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~ 253 (318)
T 2dyl_A 175 LVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLP-GH 253 (318)
T ss_dssp ------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCC-SS
T ss_pred ccCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCC-cc
Confidence 65554445567999999999983 3478899999999999999999999987 3455556666555433222 23
Q ss_pred CCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 294 PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 294 ~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
..++..+.++|.+||..||.+|||+.++|+||||+..
T Consensus 254 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (318)
T 2dyl_A 254 MGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRY 290 (318)
T ss_dssp SCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHH
T ss_pred CCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHhc
Confidence 4689999999999999999999999999999999753
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-44 Score=350.32 Aligned_cols=262 Identities=26% Similarity=0.466 Sum_probs=213.1
Q ss_pred cccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccC-CCCeeEEEEEEEe
Q 010013 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG-HRNIVELKGAYED 139 (520)
Q Consensus 61 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~-hp~iv~l~~~~~~ 139 (520)
......++|.+.+.||+|+||.||+|.+.. ++.||+|++..... .....+.+.+|+.+++++.. ||||+++++++..
T Consensus 22 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~ 99 (313)
T 3cek_A 22 SMSVKGRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT 99 (313)
T ss_dssp EEEETTEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEEC
T ss_pred eeeeccceEEEEEEecCCCCEEEEEEEcCC-CcEEEEEEeccccc-cccchHHHHHHHHHHHhccccCCceEEEEEEeec
Confidence 344455789999999999999999999864 88999999865432 34456788999999999984 6999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccc
Q 010013 140 RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (520)
Q Consensus 140 ~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~ 219 (520)
....++||| +.+++|.+++...+.+++..+..++.||+.||.|||++||+||||||+||+++ ++.+||+|||++.
T Consensus 100 ~~~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~----~~~~kL~Dfg~~~ 174 (313)
T 3cek_A 100 DQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIAN 174 (313)
T ss_dssp SSEEEEEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE----TTEEEECCCSSSC
T ss_pred CCEEEEEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE----CCeEEEeeccccc
Confidence 999999999 56889999999988999999999999999999999999999999999999995 3679999999998
Q ss_pred ccCCCC---cccccccCCCccCchhhcc------------cCCCcchhHHHHHHHHHHhhCCCCCCCCCH-HHHHHHHHc
Q 010013 220 FFKPGD---VFKDLVGSAYYVAPEVLRR------------NYGAEADIWSAGVILYILLSGVPPFWGETE-QSIFDAILR 283 (520)
Q Consensus 220 ~~~~~~---~~~~~~gt~~y~aPE~~~~------------~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~-~~~~~~~~~ 283 (520)
...... ......|++.|+|||++.+ .++.++||||||+++|+|++|..||..... ......+..
T Consensus 175 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~ 254 (313)
T 3cek_A 175 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 254 (313)
T ss_dssp C--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHC
T ss_pred cccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHh
Confidence 764332 1234578999999999854 577899999999999999999999977543 333444443
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 284 GHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
....... ....+..+.++|.+||..||++|||+.++|+||||+...
T Consensus 255 ~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 300 (313)
T 3cek_A 255 PNHEIEF--PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 300 (313)
T ss_dssp TTSCCCC--CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC-
T ss_pred cccccCC--cccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCCC
Confidence 3322221 235588999999999999999999999999999998654
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-44 Score=358.10 Aligned_cols=258 Identities=30% Similarity=0.470 Sum_probs=212.2
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~ 142 (520)
..+.++|.+.+.||+|+||.||+|.++.+|+.||||++.... ......+.+.+|+.+++++. ||||+++++++.....
T Consensus 20 ~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~ 97 (353)
T 3coi_A 20 WELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHMQ-HENVIGLLDVFTPASS 97 (353)
T ss_dssp EEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTT-SSHHHHHHHHHHHHHHHHCC-CTTBCCCSEEECSCSS
T ss_pred cccCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccc-cchHHHHHHHHHHHHHHhcC-CCCcccHhheEecccc
Confidence 346688999999999999999999999999999999986532 23344577899999999998 9999999999987653
Q ss_pred ------EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecc
Q 010013 143 ------VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (520)
Q Consensus 143 ------~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg 216 (520)
+++||||+. ++|.+.+. ..+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||
T Consensus 98 ~~~~~~~~lv~e~~~-~~l~~~~~--~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~---~~~~~kl~Dfg 171 (353)
T 3coi_A 98 LRNFYDFYLVMPFMQ-TDLQKIMG--LKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN---EDCELKILDFG 171 (353)
T ss_dssp GGGCCCCEEEEECCS-EEGGGTTT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEEC---TTCCEEECSTT
T ss_pred cccceeEEEEecccc-CCHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeEC---CCCcEEEeecc
Confidence 499999997 58877664 3599999999999999999999999999999999999994 56789999999
Q ss_pred cccccCCCCcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCC---------
Q 010013 217 LSVFFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH--------- 285 (520)
Q Consensus 217 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~--------- 285 (520)
++...... .....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+....
T Consensus 172 ~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 249 (353)
T 3coi_A 172 LARHADAE--MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQ 249 (353)
T ss_dssp CTTC----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHT
T ss_pred cccCCCCC--ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 99875432 345678999999998864 58899999999999999999999999888766555543210
Q ss_pred --------------C----CCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 286 --------------I----DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 286 --------------~----~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
. ......++.+++.+.+||.+||..||++|||+.++|+||||+..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~ 312 (353)
T 3coi_A 250 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF 312 (353)
T ss_dssp TCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred HHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence 0 00112235678999999999999999999999999999999754
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-44 Score=358.53 Aligned_cols=267 Identities=22% Similarity=0.391 Sum_probs=216.9
Q ss_pred cccCCcccccccceeecceeeccCCeEEEEEEEcCCC-cEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCC-----
Q 010013 56 RVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTK-QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN----- 129 (520)
Q Consensus 56 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~-~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~----- 129 (520)
.........+.++|.+.+.||+|+||.||+|.+..++ +.||+|++... ....+.+.+|+.+++++. |++
T Consensus 8 ~~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~-~~~~~~~~ 82 (355)
T 2eu9_A 8 HLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV----GKYREAARLEINVLKKIK-EKDKENKF 82 (355)
T ss_dssp CBCCCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHH-HHCTTSCS
T ss_pred CcccccCceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc----ccchhHHHHHHHHHHHHh-hcCCCCce
Confidence 3344556677899999999999999999999998776 68999998642 234567889999999997 554
Q ss_pred -eeEEEEEEEeCCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecC--
Q 010013 130 -IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSS-- 204 (520)
Q Consensus 130 -iv~l~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~-- 204 (520)
++.+++++...+..++||||+ +++|.+.+.... .+++..+..++.||+.||.|||++||+||||||+|||+...
T Consensus 83 ~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~ 161 (355)
T 2eu9_A 83 LCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEF 161 (355)
T ss_dssp CBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCE
T ss_pred eEEEeeeeeeeCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccc
Confidence 999999999999999999999 667777776653 69999999999999999999999999999999999999532
Q ss_pred --------------CCCCCeeEeecccccccCCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCC
Q 010013 205 --------------AEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPF 269 (520)
Q Consensus 205 --------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf 269 (520)
..++.+||+|||++...... .....||+.|+|||++.+ .++.++|||||||++|+|++|..||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf 239 (355)
T 2eu9_A 162 ETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH--HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLF 239 (355)
T ss_dssp EEEECCC-CCCEEEESCCCEEECCCTTCEETTSC--CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred cccccccccccccccCCCcEEEeecCcccccccc--ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCC
Confidence 24678999999999875432 345679999999999864 5899999999999999999999999
Q ss_pred CCCCHHHHHHHHHcCCCCCCCC----------------CC------------------------CCCCHHHHHHHHHhcc
Q 010013 270 WGETEQSIFDAILRGHIDFSSD----------------PW------------------------PNISSSAKDIVKKMLH 309 (520)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~----------------~~------------------------~~~~~~~~~li~~~l~ 309 (520)
.+.........+.......+.. .| ...+..+.+||.+||.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~ 319 (355)
T 2eu9_A 240 QTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLE 319 (355)
T ss_dssp CCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhc
Confidence 9887766554443221111100 00 1123578899999999
Q ss_pred cCCCCCCCHHHHHcCCccccC
Q 010013 310 ADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 310 ~dp~~Rps~~~~l~~~~~~~~ 330 (520)
.||++|||+.|+|+||||...
T Consensus 320 ~dP~~Rpt~~e~l~hp~f~~~ 340 (355)
T 2eu9_A 320 FDPAQRITLAEALLHPFFAGL 340 (355)
T ss_dssp SSTTTSCCHHHHTTSGGGGGC
T ss_pred CChhhCcCHHHHhcChhhcCC
Confidence 999999999999999999854
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-45 Score=357.31 Aligned_cols=258 Identities=29% Similarity=0.541 Sum_probs=204.7
Q ss_pred cccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCc---ccHHHHHHHHHHHHhcc---CCCCeeEEE
Q 010013 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR---DDVEDVRREVQIMHHLT---GHRNIVELK 134 (520)
Q Consensus 61 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~---~~~~~~~~e~~~l~~l~---~hp~iv~l~ 134 (520)
..+.+.++|.+.+.||+|+||.||+|.+..+++.||+|++........ .....+.+|+.+++++. .||||++++
T Consensus 25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 345567889999999999999999999999999999999865433221 12234567999999993 399999999
Q ss_pred EEEEeCCeEEEEEec-cCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEe
Q 010013 135 GAYEDRHSVNLIMDL-CAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKAT 213 (520)
Q Consensus 135 ~~~~~~~~~~lv~e~-~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~ 213 (520)
+++...+..++|||+ +.+++|.+++...+.+++..+..++.||+.||.|||++||+||||||+||+++. .++.+||+
T Consensus 105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~--~~~~~kl~ 182 (312)
T 2iwi_A 105 DWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDL--RRGCAKLI 182 (312)
T ss_dssp EEC-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEET--TTTEEEEC
T ss_pred EEEecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeC--CCCeEEEE
Confidence 999999999999999 789999999998888999999999999999999999999999999999999952 45679999
Q ss_pred ecccccccCCCCcccccccCCCccCchhhccc-C-CCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCC
Q 010013 214 DFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRN-Y-GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291 (520)
Q Consensus 214 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~-~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 291 (520)
|||++...... ......|++.|+|||++.+. + +.++||||||+++|+|++|+.||.... .+......++
T Consensus 183 dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~~~-- 253 (312)
T 2iwi_A 183 DFGSGALLHDE-PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------EILEAELHFP-- 253 (312)
T ss_dssp CCSSCEECCSS-CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHTCCCCC--
T ss_pred EcchhhhcccC-cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH------HHhhhccCCc--
Confidence 99999876543 34456799999999988643 3 458999999999999999999996532 2223333222
Q ss_pred CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 292 PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 292 ~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
..++..+.++|.+||+.||++|||+.++++||||+...
T Consensus 254 --~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~ 291 (312)
T 2iwi_A 254 --AHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPA 291 (312)
T ss_dssp --TTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC--
T ss_pred --ccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCch
Confidence 46789999999999999999999999999999998543
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-45 Score=355.78 Aligned_cols=260 Identities=23% Similarity=0.397 Sum_probs=198.4
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCc---EEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQ---QFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~---~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~ 140 (520)
...++|.+++.||+|+||.||+|.+..++. .||+|++..... .....+.+.+|+.++++++ ||||+++++++...
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~ 97 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADII-ASSDIEEFLREAACMKEFD-HPHVAKLVGVSLRS 97 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC-------CHHHHHHHHHHHHHTTCC-CTTBCCCCEEEECC
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEeccccc-CHHHHHHHHHHHHHHHHCC-CCceehhhceeecc
Confidence 345789999999999999999999887764 899999865432 3345678999999999997 99999999999877
Q ss_pred CeE------EEEEeccCCCchHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCC
Q 010013 141 HSV------NLIMDLCAGGELFDRIIAKG------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDS 208 (520)
Q Consensus 141 ~~~------~lv~e~~~g~~L~~~l~~~~------~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~ 208 (520)
... ++||||+.+++|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||++ .++
T Consensus 98 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~---~~~ 174 (323)
T 3qup_A 98 RAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLA---EDM 174 (323)
T ss_dssp -------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---TTS
T ss_pred ccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEc---CCC
Confidence 655 99999999999999886543 599999999999999999999999999999999999994 567
Q ss_pred CeeEeecccccccCCCCcc---cccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHc
Q 010013 209 PLKATDFGLSVFFKPGDVF---KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILR 283 (520)
Q Consensus 209 ~~kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~ 283 (520)
.+||+|||++......... ....+++.|+|||.+.+ .++.++|||||||++|+|++ |..||.+....+....+..
T Consensus 175 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~ 254 (323)
T 3qup_A 175 TVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIG 254 (323)
T ss_dssp CEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT
T ss_pred CEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhc
Confidence 8999999999876443321 23456788999999865 48999999999999999999 9999999888887777766
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-------HHHHHcCCccccCC
Q 010013 284 GHIDFSSDPWPNISSSAKDIVKKMLHADPKERLS-------AAEVLNHPWMRVDG 331 (520)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-------~~~~l~~~~~~~~~ 331 (520)
+..... .+.++..+.+++.+||+.||++||| ++++++|+|+....
T Consensus 255 ~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~ 306 (323)
T 3qup_A 255 GNRLKQ---PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTS 306 (323)
T ss_dssp TCCCCC---CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-------
T ss_pred CCCCCC---CCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCCC
Confidence 543222 2578899999999999999999999 78888999997543
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-44 Score=341.83 Aligned_cols=248 Identities=23% Similarity=0.393 Sum_probs=214.4
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
..++|.+.+.||+|+||.||+|.++. +..||+|++.... ...+.+.+|+.+++++. ||||+++++++.+....+
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~ 79 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWKG-QYDVAVKMIKEGS----MSEDEFFQEAQTMMKLS-HPKLVKFYGVCSKEYPIY 79 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETT-TEEEEEEEECBTT----BCHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSEE
T ss_pred chhheeeeeeeccCCCceEEEEEecC-ceeEEEEEeccCC----CcHHHHHHHHHHHHhCC-CCCEeeEEEEEccCCceE
Confidence 45789999999999999999998864 6789999986533 23467899999999998 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 145 LIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
+||||+++++|.+++...+ .+++..+..++.||+.||.|||+.||+||||||+||++ +.++.+||+|||++.....
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~~l~Dfg~~~~~~~ 156 (268)
T 3sxs_A 80 IVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLV---DRDLCVKVSDFGMTRYVLD 156 (268)
T ss_dssp EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEE---CTTCCEEECCTTCEEECCT
T ss_pred EEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEE---CCCCCEEEccCccceecch
Confidence 9999999999999997754 59999999999999999999999999999999999999 4567899999999987654
Q ss_pred CCcc--cccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHH
Q 010013 224 GDVF--KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (520)
Q Consensus 224 ~~~~--~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (520)
.... ....+++.|+|||++.+ .++.++||||||+++|+|++ |..||...........+..+...... ..+++.
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 233 (268)
T 3sxs_A 157 DQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRP---HLASDT 233 (268)
T ss_dssp TCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCC---TTSCHH
T ss_pred hhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCC---CcChHH
Confidence 4322 23346678999999875 58899999999999999999 99999998888888777766543332 356899
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 300 AKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 300 ~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
+.+++.+||+.||++|||+.+++++
T Consensus 234 l~~li~~~l~~~p~~Rps~~~ll~~ 258 (268)
T 3sxs_A 234 IYQIMYSCWHELPEKRPTFQQLLSS 258 (268)
T ss_dssp HHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9999999999999999999999875
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-44 Score=346.78 Aligned_cols=254 Identities=26% Similarity=0.472 Sum_probs=207.1
Q ss_pred eeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEe
Q 010013 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMD 148 (520)
Q Consensus 69 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e 148 (520)
|.....||+|+||.||+|.+..+++.||+|.+.... ....+.+.+|+.+++++. ||||+++++++...+..++|||
T Consensus 24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e 99 (295)
T 2clq_A 24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD---SRYSQPLHEEIALHKHLK-HKNIVQYLGSFSENGFIKIFME 99 (295)
T ss_dssp TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC---C---HHHHHHHHHHHTCC-CTTBCCEEEEEEETTEEEEEEE
T ss_pred CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc---hHHHHHHHHHHHHHHhCC-CCCEeeEeeEEEeCCcEEEEEE
Confidence 444458999999999999999999999999986532 334577899999999998 9999999999999999999999
Q ss_pred ccCCCchHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 149 LCAGGELFDRIIAKG---HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 149 ~~~g~~L~~~l~~~~---~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
|+++++|.+++.... .+++..+..++.||+.||.|||++||+||||||+||+++. .++.+||+|||++.......
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~--~~~~~kl~Dfg~~~~~~~~~ 177 (295)
T 2clq_A 100 QVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINT--YSGVLKISDFGTSKRLAGIN 177 (295)
T ss_dssp CCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET--TTCCEEECCTTTCEESCC--
T ss_pred eCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEEC--CCCCEEEeecccccccCCCC
Confidence 999999999987652 4678999999999999999999999999999999999963 25679999999998764322
Q ss_pred -cccccccCCCccCchhhcc---cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHH-H-HHHHHcCCCCCCCCCCCCCCHH
Q 010013 226 -VFKDLVGSAYYVAPEVLRR---NYGAEADIWSAGVILYILLSGVPPFWGETEQS-I-FDAILRGHIDFSSDPWPNISSS 299 (520)
Q Consensus 226 -~~~~~~gt~~y~aPE~~~~---~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~ 299 (520)
......|++.|+|||++.+ .++.++||||||+++|+|++|..||....... . ....... ........++..
T Consensus 178 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 254 (295)
T 2clq_A 178 PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK---VHPEIPESMSAE 254 (295)
T ss_dssp ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHC---CCCCCCTTSCHH
T ss_pred CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccc---ccccccccCCHH
Confidence 2344578999999999864 27889999999999999999999997644322 1 1111111 111223468999
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 300 AKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 300 ~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
+.++|.+||+.||++|||+.++|+||||+...
T Consensus 255 ~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~ 286 (295)
T 2clq_A 255 AKAFILKCFEPDPDKRACANDLLVDEFLKVSS 286 (295)
T ss_dssp HHHHHHHTTCSSTTTSCCHHHHHTSGGGCC--
T ss_pred HHHHHHHHccCChhhCCCHHHHhcChhhhhcc
Confidence 99999999999999999999999999998543
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-44 Score=345.31 Aligned_cols=248 Identities=24% Similarity=0.411 Sum_probs=211.4
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
..++|.+.+.||+|+||.||+|.+. ++..||+|++..... ..+.+.+|+.+++++. ||||+++++++.+.+..+
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~ 95 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM----SEDEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIF 95 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSB----CHHHHHHHHHHHHTCC-CTTBCCEEEEECSSSSEE
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCC----CHHHHHHHHHHHhcCC-CCCEeeEEEEEecCCCeE
Confidence 3468999999999999999999887 467899999865432 3467889999999998 999999999999999999
Q ss_pred EEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 145 LIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
+||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++.....
T Consensus 96 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili---~~~~~~kl~Dfg~~~~~~~ 172 (283)
T 3gen_A 96 IITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV---NDQGVVKVSDFGLSRYVLD 172 (283)
T ss_dssp EEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEE---CTTSCEEECSTTGGGGBCC
T ss_pred EEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEE---cCCCCEEEccccccccccc
Confidence 99999999999999976 4679999999999999999999999999999999999999 4567899999999987643
Q ss_pred CC--cccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHH
Q 010013 224 GD--VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (520)
Q Consensus 224 ~~--~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (520)
.. ......+|+.|+|||++. ..++.++||||||+++|+|++ |..||...........+......... ..+++.
T Consensus 173 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 249 (283)
T 3gen_A 173 DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRP---HLASEK 249 (283)
T ss_dssp HHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCC---TTCCHH
T ss_pred cccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCCC---CcCCHH
Confidence 22 112335678899999986 458999999999999999998 99999999888888887776443322 456899
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 300 AKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 300 ~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
+.++|.+||+.||++|||+.++++|
T Consensus 250 l~~li~~~l~~~p~~Rps~~~ll~~ 274 (283)
T 3gen_A 250 VYTIMYSCWHEKADERPTFKILLSN 274 (283)
T ss_dssp HHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHccCChhHCcCHHHHHHH
Confidence 9999999999999999999999875
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-44 Score=342.97 Aligned_cols=247 Identities=24% Similarity=0.448 Sum_probs=213.4
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.++|.+.+.||+|+||.||+|.+.. ++.||+|++.... ...+.+.+|+.++++++ ||||+++++++.+.+..++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~l 82 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLN-KDKVAIKTIREGA----MSEEDFIEEAEVMMKLS-HPKLVQLYGVCLEQAPICL 82 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEEECTTS----BCHHHHHHHHHHHHTCC-CTTBCCEEEEECSSSSEEE
T ss_pred hhhceeeheecCCCccEEEEEEecC-CCeEEEEEecccc----cCHHHHHHHHHHHHhCC-CCCEeeEEEEEecCCceEE
Confidence 3679999999999999999999874 6789999986533 23467899999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 146 IMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
||||+++++|.+++... +.+++..+..++.|++.||.|||++||+||||||+||+++ .++.+||+|||++......
T Consensus 83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~---~~~~~kl~Dfg~~~~~~~~ 159 (269)
T 4hcu_A 83 VFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG---ENQVIKVSDFGMTRFVLDD 159 (269)
T ss_dssp EEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---GGGCEEECCTTGGGGBCCH
T ss_pred EEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEc---CCCCEEecccccccccccc
Confidence 99999999999999654 4589999999999999999999999999999999999994 4567999999999876432
Q ss_pred C--cccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHH
Q 010013 225 D--VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300 (520)
Q Consensus 225 ~--~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (520)
. ......+++.|+|||++. ..++.++||||||+++|+|++ |..||...........+......... ..++..+
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 236 (269)
T 4hcu_A 160 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKP---RLASTHV 236 (269)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCC---TTSCHHH
T ss_pred ccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCCCC---CcCCHHH
Confidence 2 122345677899999986 458999999999999999999 99999999988888888776433322 4578999
Q ss_pred HHHHHHhcccCCCCCCCHHHHHcC
Q 010013 301 KDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 301 ~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
.+++.+||+.||++|||+.++++|
T Consensus 237 ~~li~~~l~~~p~~Rps~~~ll~~ 260 (269)
T 4hcu_A 237 YQIMNHCWRERPEDRPAFSRLLRQ 260 (269)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHccCCcccCcCHHHHHHH
Confidence 999999999999999999999875
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-45 Score=367.46 Aligned_cols=262 Identities=24% Similarity=0.393 Sum_probs=208.6
Q ss_pred CcccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccC-------CCCeeE
Q 010013 60 KPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG-------HRNIVE 132 (520)
Q Consensus 60 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~-------hp~iv~ 132 (520)
.....+.++|.+.+.||+|+||+||+|.+..+++.||||++... ....+.+.+|+.+++++.. ||||++
T Consensus 30 ~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~ 105 (397)
T 1wak_A 30 KIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA----EHYTETALDEIRLLKSVRNSDPNDPNREMVVQ 105 (397)
T ss_dssp CTTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCC
T ss_pred ehhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC----CcchHHHHHHHHHHHHHhhcCCCCCCcceeee
Confidence 34455678999999999999999999999999999999998643 2345778899999999962 788999
Q ss_pred EEEEEE----eCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHc-CCeeecCCCCcEEeecCC
Q 010013 133 LKGAYE----DRHSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSM-GVMHRDLKPENFLFSSSA 205 (520)
Q Consensus 133 l~~~~~----~~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIll~~~~ 205 (520)
+++++. ....+++||||+ +++|.+.+... +.+++..+..++.||+.||.|||++ ||+||||||+|||++.++
T Consensus 106 ~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~ 184 (397)
T 1wak_A 106 LLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNE 184 (397)
T ss_dssp EEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCH
T ss_pred eecceeecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccc
Confidence 999987 556899999999 66777777654 4699999999999999999999998 999999999999996432
Q ss_pred ----------------------------------------------CCCCeeEeecccccccCCCCcccccccCCCccCc
Q 010013 206 ----------------------------------------------EDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAP 239 (520)
Q Consensus 206 ----------------------------------------------~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aP 239 (520)
....+||+|||++...... .....||+.|+||
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~--~~~~~gt~~y~aP 262 (397)
T 1wak_A 185 QYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH--FTEDIQTRQYRSL 262 (397)
T ss_dssp HHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC--SCSCCSCGGGCCH
T ss_pred hhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc--CccCCCCCcccCC
Confidence 1137999999999876432 3456799999999
Q ss_pred hhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCC------HHHHHHHHHcCCCCCC-----------------------
Q 010013 240 EVLRR-NYGAEADIWSAGVILYILLSGVPPFWGET------EQSIFDAILRGHIDFS----------------------- 289 (520)
Q Consensus 240 E~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~------~~~~~~~~~~~~~~~~----------------------- 289 (520)
|++.+ .++.++|||||||++|+|++|..||.+.. .......+.......+
T Consensus 263 E~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 342 (397)
T 1wak_A 263 EVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHI 342 (397)
T ss_dssp HHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSC
T ss_pred hhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccc
Confidence 99865 48999999999999999999999997654 2222222211000000
Q ss_pred -C--------------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccc
Q 010013 290 -S--------------DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (520)
Q Consensus 290 -~--------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~ 328 (520)
. ......+..+.+||.+||+.||++|||+.|+|+||||+
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~ 396 (397)
T 1wak_A 343 TKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN 396 (397)
T ss_dssp CCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGG
T ss_pred cccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCcccc
Confidence 0 00012245788999999999999999999999999996
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-45 Score=356.49 Aligned_cols=258 Identities=31% Similarity=0.542 Sum_probs=215.8
Q ss_pred CcccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCc---ccHHHHHHHHHHHHhcc-CCCCeeEEEE
Q 010013 60 KPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR---DDVEDVRREVQIMHHLT-GHRNIVELKG 135 (520)
Q Consensus 60 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~---~~~~~~~~e~~~l~~l~-~hp~iv~l~~ 135 (520)
...+.+.++|.+++.||+|+||.||+|.+..+++.||||++........ ...+.+.+|+.+++++. +||||+++++
T Consensus 36 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~ 115 (320)
T 3a99_A 36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD 115 (320)
T ss_dssp ----CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEE
T ss_pred cccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEE
Confidence 3445577889999999999999999999999999999999976543221 12245678999999997 3799999999
Q ss_pred EEEeCCeEEEEEeccCC-CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEee
Q 010013 136 AYEDRHSVNLIMDLCAG-GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATD 214 (520)
Q Consensus 136 ~~~~~~~~~lv~e~~~g-~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~D 214 (520)
++...+..++|||++.+ ++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++. .++.+||+|
T Consensus 116 ~~~~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~--~~~~~kL~D 193 (320)
T 3a99_A 116 WFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRGELKLID 193 (320)
T ss_dssp EEECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET--TTTEEEECC
T ss_pred EEecCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeC--CCCCEEEee
Confidence 99999999999999976 899999998889999999999999999999999999999999999999952 456799999
Q ss_pred cccccccCCCCcccccccCCCccCchhhccc--CCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCC
Q 010013 215 FGLSVFFKPGDVFKDLVGSAYYVAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292 (520)
Q Consensus 215 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 292 (520)
||++...... ......||+.|+|||++.+. .+.++||||||+++|+|++|..||.... .+......+
T Consensus 194 fg~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------~~~~~~~~~---- 262 (320)
T 3a99_A 194 FGSGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFF---- 262 (320)
T ss_dssp CTTCEECCSS-CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHCCCCC----
T ss_pred Cccccccccc-cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh------hhhcccccc----
Confidence 9999876533 33456799999999988643 4678999999999999999999996532 222332222
Q ss_pred CCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 293 ~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
...+++.+.++|.+||..||++|||+.++++||||+..
T Consensus 263 ~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~ 300 (320)
T 3a99_A 263 RQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 300 (320)
T ss_dssp SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSC
T ss_pred cccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCc
Confidence 24679999999999999999999999999999999854
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-45 Score=361.04 Aligned_cols=253 Identities=25% Similarity=0.376 Sum_probs=208.9
Q ss_pred ccccceeecceeeccCCeEEEEEE-----EcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVT-----HKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE 138 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~-----~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~ 138 (520)
...++|.+++.||+|+||.||+|. +..+++.||||++.... .....+.+.+|+.++.++.+||||+++++++.
T Consensus 19 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~ 96 (359)
T 3vhe_A 19 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACT 96 (359)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC--CHHHHHHHHHHHHHHHhhcCCcceeeeeeeee
Confidence 345789999999999999999999 45567899999996432 33445679999999999966999999999988
Q ss_pred eCC-eEEEEEeccCCCchHHHHHhcCC-----------------------------------------------------
Q 010013 139 DRH-SVNLIMDLCAGGELFDRIIAKGH----------------------------------------------------- 164 (520)
Q Consensus 139 ~~~-~~~lv~e~~~g~~L~~~l~~~~~----------------------------------------------------- 164 (520)
..+ .+++||||++||+|.+++.....
T Consensus 97 ~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (359)
T 3vhe_A 97 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDV 176 (359)
T ss_dssp STTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------------
T ss_pred cCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchh
Confidence 754 48999999999999999976543
Q ss_pred -------------CCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC---ccc
Q 010013 165 -------------YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFK 228 (520)
Q Consensus 165 -------------l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~---~~~ 228 (520)
+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++....... ...
T Consensus 177 ~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~---~~~~~kl~Dfg~a~~~~~~~~~~~~~ 253 (359)
T 3vhe_A 177 EEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKG 253 (359)
T ss_dssp -------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GGGCEEECCCGGGSCTTSCTTCEEC-
T ss_pred hhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEc---CCCcEEEEeccceeeecccccchhcc
Confidence 89999999999999999999999999999999999994 56679999999998764332 223
Q ss_pred ccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCCCCHHHHHHHH
Q 010013 229 DLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQ-SIFDAILRGHIDFSSDPWPNISSSAKDIVK 305 (520)
Q Consensus 229 ~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 305 (520)
...||+.|+|||++. ..++.++|||||||++|+|++ |..||.+.... .....+..+... . ....+++.+.+++.
T Consensus 254 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~l~~li~ 330 (359)
T 3vhe_A 254 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM-R--APDYTTPEMYQTML 330 (359)
T ss_dssp -CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCC-C--CCTTCCHHHHHHHH
T ss_pred ccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCC-C--CCCCCCHHHHHHHH
Confidence 456888999999886 458999999999999999998 99999886643 333444433222 1 12467899999999
Q ss_pred HhcccCCCCCCCHHHHHcC
Q 010013 306 KMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 306 ~~l~~dp~~Rps~~~~l~~ 324 (520)
+||+.||++|||+.++++|
T Consensus 331 ~~l~~dP~~Rps~~ell~~ 349 (359)
T 3vhe_A 331 DCWHGEPSQRPTFSELVEH 349 (359)
T ss_dssp HHTCSSGGGSCCHHHHHHH
T ss_pred HHccCChhhCCCHHHHHHH
Confidence 9999999999999999875
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=358.06 Aligned_cols=252 Identities=24% Similarity=0.372 Sum_probs=216.0
Q ss_pred cccccceeecceeeccCCeEEEEEEEcC-----CCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHKD-----TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAY 137 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~ 137 (520)
....++|.+.+.||+|+||.||+|.+.. +++.||+|++.... .....+.+.+|+.+++++. ||||+++++++
T Consensus 43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~ 119 (343)
T 1luf_A 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFD-NPNIVKLLGVC 119 (343)
T ss_dssp BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHHTCC-CTTBCCEEEEE
T ss_pred EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc--CHHHHHHHHHHHHHHHhCC-CCCEEEEEEEE
Confidence 3456789999999999999999999973 45889999986432 3344677999999999997 99999999999
Q ss_pred EeCCeEEEEEeccCCCchHHHHHhc------------------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeec
Q 010013 138 EDRHSVNLIMDLCAGGELFDRIIAK------------------------GHYSERAAANLCRQMVTVVHYCHSMGVMHRD 193 (520)
Q Consensus 138 ~~~~~~~lv~e~~~g~~L~~~l~~~------------------------~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~D 193 (520)
.+.+..++||||+++++|.+++... ..+++..++.++.||+.||.|||++||+|||
T Consensus 120 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~D 199 (343)
T 1luf_A 120 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRD 199 (343)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred ccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 9999999999999999999999764 5689999999999999999999999999999
Q ss_pred CCCCcEEeecCCCCCCeeEeecccccccCCCC---cccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCC
Q 010013 194 LKPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPP 268 (520)
Q Consensus 194 lkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~p 268 (520)
|||+||+++ .++.+||+|||++....... ......+|+.|+|||++. ..++.++||||||+++|+|++ |..|
T Consensus 200 lkp~NIl~~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p 276 (343)
T 1luf_A 200 LATRNCLVG---ENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP 276 (343)
T ss_dssp CSGGGEEEC---GGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred CCcceEEEC---CCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCc
Confidence 999999994 56689999999998654322 123456788999999886 458999999999999999999 9999
Q ss_pred CCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 269 FWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
|.+....+....+..+..... ...++..+.+++.+||+.||++|||+.++++
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~ 328 (343)
T 1luf_A 277 YYGMAHEEVIYYVRDGNILAC---PENCPLELYNLMRLCWSKLPADRPSFCSIHR 328 (343)
T ss_dssp TTTSCHHHHHHHHHTTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCChHHHHHHHhCCCcCCC---CCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 999988888888777654322 2467899999999999999999999999986
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-45 Score=355.68 Aligned_cols=245 Identities=25% Similarity=0.424 Sum_probs=206.0
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.++|.+++.||+|+||.||+|.+..+++.||+|++... .....+.+.+|+.++++++ ||||+++++++.+++..++
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~l 84 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF---DEETQRTFLKEVKVMRCLE-HPNVLKFIGVLYKDKRLNF 84 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC---CHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEETTEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhCC-CcCcccEEEEEecCCeeEE
Confidence 46899999999999999999999999999999988532 3455678999999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 146 IMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
||||++|++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++......
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~ 161 (310)
T 3s95_A 85 ITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLV---RENKNVVVADFGLARLMVDE 161 (310)
T ss_dssp EEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEE---CTTSCEEECCCTTCEECC--
T ss_pred EEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEE---CCCCCEEEeecccceecccc
Confidence 9999999999999987 5679999999999999999999999999999999999999 45678999999999876432
Q ss_pred Ccc---------------cccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHH-----HHHHHHc
Q 010013 225 DVF---------------KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQS-----IFDAILR 283 (520)
Q Consensus 225 ~~~---------------~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~-----~~~~~~~ 283 (520)
... ....||+.|+|||++.+ .++.++||||||+++|+|++|..||....... .......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~ 241 (310)
T 3s95_A 162 KTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLD 241 (310)
T ss_dssp ------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHH
T ss_pred cccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccc
Confidence 211 14579999999999875 58999999999999999999999986532210 0011111
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 284 GHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.. ..+.+++.+.+++.+||+.||++|||+.++++
T Consensus 242 ~~------~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~ 275 (310)
T 3s95_A 242 RY------CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEH 275 (310)
T ss_dssp HT------CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cc------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 00 12467889999999999999999999999976
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-44 Score=354.80 Aligned_cols=259 Identities=22% Similarity=0.303 Sum_probs=216.3
Q ss_pred ccccceeecceeeccCCeEEEEEE-----EcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVT-----HKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE 138 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~-----~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~ 138 (520)
...++|.+++.||+|+||.||+|. +..++..||+|++... ........+.+|+.+++++. ||||+++++++.
T Consensus 27 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~ 103 (327)
T 2yfx_A 27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKFN-HQNIVRCIGVSL 103 (327)
T ss_dssp CCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSS--CCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEC
T ss_pred CChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccc--cchhhHHHHHHHHHHHhhCC-CCCCCeEEEEEc
Confidence 345789999999999999999999 4567889999998532 23344567889999999997 999999999999
Q ss_pred eCCeEEEEEeccCCCchHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCee
Q 010013 139 DRHSVNLIMDLCAGGELFDRIIAKG-------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLK 211 (520)
Q Consensus 139 ~~~~~~lv~e~~~g~~L~~~l~~~~-------~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~k 211 (520)
.....++||||++|++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++..+.+..+|
T Consensus 104 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~k 183 (327)
T 2yfx_A 104 QSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAK 183 (327)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEE
Confidence 9999999999999999999998753 489999999999999999999999999999999999997655667899
Q ss_pred EeecccccccCCCC---cccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCC
Q 010013 212 ATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHI 286 (520)
Q Consensus 212 l~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~ 286 (520)
|+|||++....... ......|++.|+|||++. +.++.++||||||+++|+|++ |..||...........+..+..
T Consensus 184 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~ 263 (327)
T 2yfx_A 184 IGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR 263 (327)
T ss_dssp ECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCC
T ss_pred ECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCC
Confidence 99999987653222 123346788999999885 458999999999999999998 9999999888888877776643
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccc
Q 010013 287 DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (520)
Q Consensus 287 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~ 328 (520)
... ...++..+.++|.+||+.||.+|||+.+++++.|+.
T Consensus 264 ~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~ 302 (327)
T 2yfx_A 264 MDP---PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 302 (327)
T ss_dssp CCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCC---CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 322 257889999999999999999999999999987764
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-44 Score=347.09 Aligned_cols=253 Identities=26% Similarity=0.482 Sum_probs=202.4
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
..++|.+.+.||+|+||.||+|.+..+|+.||+|++...........+.+.+|+.++++++ ||||+++++++...+..+
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~ 108 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN-HPNVIKYYASFIEDNELN 108 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEEETTEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCcEE
Confidence 3467999999999999999999999999999999997655445556678999999999998 999999999999999999
Q ss_pred EEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccc
Q 010013 145 LIMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~----~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 220 (520)
+||||+.+++|.+++.. ...+++..+..++.||+.||.|||+.|++||||||+||+++ .++.+||+|||++..
T Consensus 109 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~---~~~~~kl~Dfg~~~~ 185 (310)
T 2wqm_A 109 IVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFIT---ATGVVKLGDLGLGRF 185 (310)
T ss_dssp EEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEECCC-----
T ss_pred EEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEc---CCCCEEEEeccceee
Confidence 99999999999998864 45699999999999999999999999999999999999994 567899999999887
Q ss_pred cCCCC-cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCC--HHHHHHHHHcCCCCCCCCCCCCC
Q 010013 221 FKPGD-VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGET--EQSIFDAILRGHIDFSSDPWPNI 296 (520)
Q Consensus 221 ~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 296 (520)
..... ......|++.|+|||++.+ .++.++||||||+++|+|++|..||.+.. .......+...... ......+
T Consensus 186 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 263 (310)
T 2wqm_A 186 FSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYP--PLPSDHY 263 (310)
T ss_dssp -------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSC--CCCTTTS
T ss_pred ecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCC--CCccccc
Confidence 64322 2234578999999998864 58899999999999999999999997643 33444555544332 2223578
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 297 SSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 297 ~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
+..+.++|.+||..||++|||+.++++
T Consensus 264 ~~~l~~li~~~l~~dp~~Rps~~~il~ 290 (310)
T 2wqm_A 264 SEELRQLVNMCINPDPEKRPDVTYVYD 290 (310)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 999999999999999999999999986
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-44 Score=341.23 Aligned_cols=252 Identities=25% Similarity=0.417 Sum_probs=202.8
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCC-cccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN-RDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
.++|.+.+.||+|+||.||+|.+. +..+|+|++....... ....+.+.+|+.+++.++ ||||+++++++...+..+
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 82 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLK-HPNIIALRGVCLKEPNLC 82 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCC-CTTBCCEEEEECCC--CE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcC-CCCEeeEEEEEecCCceE
Confidence 467999999999999999999985 7889999986543222 234578899999999998 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcC---CeeecCCCCcEEeecCC-----CCCCeeEeecc
Q 010013 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG---VMHRDLKPENFLFSSSA-----EDSPLKATDFG 216 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~-----~~~~~kl~Dfg 216 (520)
+||||++|++|.+++. .+.+++..+..++.|++.||.|||++| |+||||||+||+++... .++.+||+|||
T Consensus 83 lv~e~~~~~~L~~~~~-~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg 161 (271)
T 3dtc_A 83 LVMEFARGGPLNRVLS-GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG 161 (271)
T ss_dssp EEEECCTTEEHHHHHT-SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCC
T ss_pred EEEEcCCCCCHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCC
Confidence 9999999999988774 567999999999999999999999999 89999999999996422 26679999999
Q ss_pred cccccCCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCC
Q 010013 217 LSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295 (520)
Q Consensus 217 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (520)
.+....... .....||+.|+|||.+.+ .++.++||||||+++|+|++|..||.+.........+.......+. ...
T Consensus 162 ~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~ 238 (271)
T 3dtc_A 162 LAREWHRTT-KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPI--PST 238 (271)
T ss_dssp C--------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCC--CTT
T ss_pred ccccccccc-ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCC--Ccc
Confidence 998764332 234578999999998864 4889999999999999999999999998887777766665544332 247
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 296 ISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 296 ~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
+++.+.+++.+||+.||++|||+.+++++
T Consensus 239 ~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 267 (271)
T 3dtc_A 239 CPEPFAKLMEDCWNPDPHSRPSFTNILDQ 267 (271)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred cCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence 88999999999999999999999999874
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-44 Score=361.63 Aligned_cols=250 Identities=23% Similarity=0.381 Sum_probs=213.5
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
..++|.+++.||+|+||.||+|.++.+++.||+|++... ......+.+.+|+.+++++. ||||+++++++...+..+
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~ 188 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET--LPPDLKAKFLQEARILKQYS-HPNIVRLIGVCTQKQPIY 188 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTT--SCHHHHTTTTHHHHHHTTCC-CTTBCCEEEEECSSSSCE
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEcccc--CCHHHHHHHHHHHHHHHhCC-CCCEEEEEEEEecCCCcE
Confidence 357899999999999999999999989999999998643 22334456889999999998 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 145 LIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
+||||+++|+|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++....
T Consensus 189 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~---~~~~~~kl~DfG~s~~~~~ 265 (377)
T 3cbl_A 189 IVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLV---TEKNVLKISDFGMSREEAD 265 (377)
T ss_dssp EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCGGGCEECTT
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEE---cCCCcEEECcCCCceecCC
Confidence 9999999999999997654 59999999999999999999999999999999999999 4567899999999987543
Q ss_pred CCcc---cccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCH
Q 010013 224 GDVF---KDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298 (520)
Q Consensus 224 ~~~~---~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (520)
.... ....+++.|+|||++. +.++.++|||||||++|+|++ |..||.+....+....+..+.... ....++.
T Consensus 266 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 342 (377)
T 3cbl_A 266 GVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLP---CPELCPD 342 (377)
T ss_dssp SEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCCC---CCTTCCH
T ss_pred CceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC---CCCCCCH
Confidence 2211 1123467899999986 458899999999999999998 999999988888777776654322 1246789
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 299 SAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 299 ~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.+.+++.+||+.||++|||+.++++
T Consensus 343 ~l~~li~~cl~~dP~~Rps~~~i~~ 367 (377)
T 3cbl_A 343 AVFRLMEQCWAYEPGQRPSFSTIYQ 367 (377)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHcCCCchhCcCHHHHHH
Confidence 9999999999999999999999975
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-44 Score=353.12 Aligned_cols=252 Identities=19% Similarity=0.252 Sum_probs=206.5
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
+.++|.+.+.||+|+||.||+|.+..+++.||||++..... .+.+.+|+.+++++.+||||+++++++...+..+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~ 81 (330)
T 2izr_A 7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR-----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNA 81 (330)
T ss_dssp ETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS-----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEE
T ss_pred EcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc-----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccE
Confidence 45789999999999999999999999999999999864322 2457899999999955999999999999999999
Q ss_pred EEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCC--CCCeeEeeccccccc
Q 010013 145 LIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAE--DSPLKATDFGLSVFF 221 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~--~~~~kl~Dfg~a~~~ 221 (520)
+||||+ +++|.+++.. .+.+++..+..++.||+.||.|||++||+||||||+|||++.++. ...+||+|||++...
T Consensus 82 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~ 160 (330)
T 2izr_A 82 MVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY 160 (330)
T ss_dssp EEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEES
T ss_pred EEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceee
Confidence 999999 9999999986 467999999999999999999999999999999999999964321 123999999999876
Q ss_pred CCCCc--------ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCC---HHHHHHHHHcCCCCCC
Q 010013 222 KPGDV--------FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGET---EQSIFDAILRGHIDFS 289 (520)
Q Consensus 222 ~~~~~--------~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~---~~~~~~~~~~~~~~~~ 289 (520)
..... .....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.. ..+....+.......+
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 240 (330)
T 2izr_A 161 IDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATP 240 (330)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSC
T ss_pred ecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCC
Confidence 43321 245679999999999875 48999999999999999999999998743 3344444433322222
Q ss_pred CC-CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 290 SD-PWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 290 ~~-~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.. ....+| .+.+++..||..||.+||++.++++
T Consensus 241 ~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~ 274 (330)
T 2izr_A 241 IEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRK 274 (330)
T ss_dssp HHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred HHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 11 112344 9999999999999999999998875
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-44 Score=349.87 Aligned_cols=252 Identities=23% Similarity=0.358 Sum_probs=215.0
Q ss_pred ccccceeecceeeccCCeEEEEEEEc-----CCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHK-----DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE 138 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~ 138 (520)
...++|.+++.||+|+||.||+|.+. .++..||+|++.... .....+.+.+|+.++++++ ||||+++++++.
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~ 96 (314)
T 2ivs_A 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA--SPSELRDLLSEFNVLKQVN-HPHVIKLYGACS 96 (314)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEC
T ss_pred cchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCC-CCceeeEEEEEe
Confidence 34578999999999999999999983 445889999986432 3445678899999999998 999999999999
Q ss_pred eCCeEEEEEeccCCCchHHHHHhcCC------------------------CCHHHHHHHHHHHHHHHHHHHHcCCeeecC
Q 010013 139 DRHSVNLIMDLCAGGELFDRIIAKGH------------------------YSERAAANLCRQMVTVVHYCHSMGVMHRDL 194 (520)
Q Consensus 139 ~~~~~~lv~e~~~g~~L~~~l~~~~~------------------------l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dl 194 (520)
..+..++||||++|++|.+++..... +++..+..++.||+.||.|||++||+||||
T Consensus 97 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~di 176 (314)
T 2ivs_A 97 QDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDL 176 (314)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred cCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCccccc
Confidence 99999999999999999999987543 899999999999999999999999999999
Q ss_pred CCCcEEeecCCCCCCeeEeecccccccCCCCc---ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCC
Q 010013 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPF 269 (520)
Q Consensus 195 kp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf 269 (520)
||+||+++ .++.+||+|||++........ .....+++.|+|||++.+ .++.++||||||+++|+|++ |..||
T Consensus 177 kp~NIli~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 253 (314)
T 2ivs_A 177 AARNILVA---EGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 253 (314)
T ss_dssp SGGGEEEE---TTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred chheEEEc---CCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCC
Confidence 99999995 466799999999987644332 123456788999998864 48899999999999999999 99999
Q ss_pred CCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 270 WGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
.+.........+..+.... ....+++.+.++|.+||+.||++|||+.+++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~ 305 (314)
T 2ivs_A 254 PGIPPERLFNLLKTGHRME---RPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD 305 (314)
T ss_dssp TTCCGGGHHHHHHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCHHHHHHHhhcCCcCC---CCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 9888877777776654322 225789999999999999999999999999874
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-44 Score=342.45 Aligned_cols=252 Identities=25% Similarity=0.394 Sum_probs=207.3
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCccc----HHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDD----VEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~----~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~ 140 (520)
..++|.+.+.||+|+||.||+|.+..+++.||+|++.......... .+.+.+|+.++++++ ||||+++++++.+.
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~ 95 (287)
T 4f0f_A 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN-HPNIVKLYGLMHNP 95 (287)
T ss_dssp CSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCC-CTTBCCEEEEETTT
T ss_pred hhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCC-CCCchhhheeecCC
Confidence 3478999999999999999999999999999999986543322221 267899999999998 99999999998766
Q ss_pred CeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcC--CeeecCCCCcEEeecCCC--CCCeeEeec
Q 010013 141 HSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMG--VMHRDLKPENFLFSSSAE--DSPLKATDF 215 (520)
Q Consensus 141 ~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIll~~~~~--~~~~kl~Df 215 (520)
. ++||||+++++|.+.+... ..+++..+..++.|++.||.|||++| |+||||||+||+++..+. ...+||+||
T Consensus 96 ~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df 173 (287)
T 4f0f_A 96 P--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173 (287)
T ss_dssp T--EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred C--eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence 5 6899999999999888654 46999999999999999999999999 999999999999964321 224999999
Q ss_pred ccccccCCCCcccccccCCCccCchhhc---ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHH--HHHHHHcCCCCCCC
Q 010013 216 GLSVFFKPGDVFKDLVGSAYYVAPEVLR---RNYGAEADIWSAGVILYILLSGVPPFWGETEQS--IFDAILRGHIDFSS 290 (520)
Q Consensus 216 g~a~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~--~~~~~~~~~~~~~~ 290 (520)
|++..... ......||+.|+|||++. ..++.++|||||||++|+|++|..||....... ....+.......
T Consensus 174 g~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-- 249 (287)
T 4f0f_A 174 GLSQQSVH--SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRP-- 249 (287)
T ss_dssp TTCBCCSS--CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCC--
T ss_pred Cccccccc--cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCC--
Confidence 99986433 345568999999999983 347889999999999999999999997755332 234444333322
Q ss_pred CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 291 DPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 291 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.....+++.+.++|.+||+.||++|||+.++++
T Consensus 250 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 282 (287)
T 4f0f_A 250 TIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282 (287)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 223578999999999999999999999999986
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-45 Score=356.12 Aligned_cols=256 Identities=23% Similarity=0.361 Sum_probs=207.0
Q ss_pred cccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 010013 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (520)
Q Consensus 61 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~ 140 (520)
..+...++|.+.+.||+|+||.||+|.+. +++.||+|++... .....+.+.+|+.++++++ ||||+++++++...
T Consensus 33 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~ 107 (321)
T 2qkw_B 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPE---SSQGIEEFETEIETLSFCR-HPHLVSLIGFCDER 107 (321)
T ss_dssp CCCCCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSC---CSSHHHHHHHHHHGGGSCC-CTTBCCEEEECCCT
T ss_pred HHHHHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEeccc---ChHHHHHHHHHHHHHHhCC-CCCEeeEEEEEcCC
Confidence 34456688999999999999999999975 5889999987643 2345678999999999998 99999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecc
Q 010013 141 HSVNLIMDLCAGGELFDRIIAKG----HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (520)
Q Consensus 141 ~~~~lv~e~~~g~~L~~~l~~~~----~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg 216 (520)
+..++||||+++++|.+++.... .+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||
T Consensus 108 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg 184 (321)
T 2qkw_B 108 NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILL---DENFVPKITDFG 184 (321)
T ss_dssp TCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEE---CTTCCEEECCCT
T ss_pred CeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEE---CCCCCEEEeecc
Confidence 99999999999999999886543 58999999999999999999999999999999999999 457789999999
Q ss_pred cccccCCCC---cccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHH-------HHHHcCC
Q 010013 217 LSVFFKPGD---VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIF-------DAILRGH 285 (520)
Q Consensus 217 ~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~-------~~~~~~~ 285 (520)
++....... ......||+.|+|||++. +.++.++||||||+++|+|++|+.||.+....... .......
T Consensus 185 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 264 (321)
T 2qkw_B 185 ISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264 (321)
T ss_dssp TCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTC
T ss_pred cccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccccc
Confidence 998653221 223456899999999885 56899999999999999999999999765432111 1111111
Q ss_pred CC------CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 286 ID------FSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 286 ~~------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
.. ......+.++..+.+++.+||+.||++|||+.+++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 309 (321)
T 2qkw_B 265 LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWK 309 (321)
T ss_dssp CCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 10 0111112345678999999999999999999999875
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-44 Score=352.08 Aligned_cols=259 Identities=23% Similarity=0.342 Sum_probs=190.2
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHH-HHHhccCCCCeeEEEEEEEeCCeE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQ-IMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~-~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
..++|.+.+.||+|+||.||+|.++.+|+.||||++.... .......+..|+. +++.+. ||||+++++++...+..
T Consensus 20 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~~~~-h~niv~~~~~~~~~~~~ 96 (327)
T 3aln_A 20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV--DEKEQKQLLMDLDVVMRSSD-CPYIVQFYGALFREGDC 96 (327)
T ss_dssp CSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCC--CHHHHHHHHHHHHHHHSSCC-CTTBCCEEEEEECSSEE
T ss_pred CHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeeccc--CchHHHHHHHHHHHHHHcCC-CCcEeeeeeEEEeCCce
Confidence 3478999999999999999999999999999999986532 2233455666666 455555 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHc-CCeeecCCCCcEEeecCCCCCCeeEeeccc
Q 010013 144 NLIMDLCAGGELFDRIIA-----KGHYSERAAANLCRQMVTVVHYCHSM-GVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~-----~~~l~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~ 217 (520)
++||||+.+ +|.+.+.. ...+++..+..++.|++.||.|||+. ||+||||||+||+++ .++.+||+|||+
T Consensus 97 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~---~~~~~kl~Dfg~ 172 (327)
T 3aln_A 97 WICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLD---RSGNIKLCDFGI 172 (327)
T ss_dssp EEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEE---TTTEEEECCCSS
T ss_pred EEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEc---CCCCEEEccCCC
Confidence 999999975 78777653 56799999999999999999999998 999999999999995 466799999999
Q ss_pred ccccCCCCcccccccCCCccCchhhc-----ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHH-HHHHHHHcCC-CCCCC
Q 010013 218 SVFFKPGDVFKDLVGSAYYVAPEVLR-----RNYGAEADIWSAGVILYILLSGVPPFWGETEQ-SIFDAILRGH-IDFSS 290 (520)
Q Consensus 218 a~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~-~~~~~~~~~~-~~~~~ 290 (520)
+.............||+.|+|||++. ..++.++||||||+++|+|++|..||...... +....+..+. ..+..
T Consensus 173 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 252 (327)
T 3aln_A 173 SGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSN 252 (327)
T ss_dssp SCC------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCC
T ss_pred ceecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCC
Confidence 98775544444557999999999973 34889999999999999999999999765431 2222222221 12222
Q ss_pred CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 291 DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 291 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
.....++..+.+||.+||..||++|||+.++++||||...
T Consensus 253 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 292 (327)
T 3aln_A 253 SEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMY 292 (327)
T ss_dssp CSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred cccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHh
Confidence 2335689999999999999999999999999999999754
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-44 Score=342.79 Aligned_cols=251 Identities=27% Similarity=0.371 Sum_probs=201.9
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCC---CcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDT---KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~ 139 (520)
+...++|.+++.||+|+||.||+|.+..+ +..+|+|++.... .....+.+.+|+.+++++. ||||+++++++.
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~- 86 (281)
T 1mp8_A 11 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT--SDSVREKFLQEALTMRQFD-HPHIVKLIGVIT- 86 (281)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT--SHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEC-
T ss_pred EEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHHhCC-CCccceEEEEEc-
Confidence 34567899999999999999999998654 4569999876432 3344677899999999998 999999999984
Q ss_pred CCeEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccc
Q 010013 140 RHSVNLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218 (520)
Q Consensus 140 ~~~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a 218 (520)
.+..++||||+++++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||++. ++.+||+|||++
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~---~~~~kl~Dfg~~ 163 (281)
T 1mp8_A 87 ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLS 163 (281)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE---TTEEEECC----
T ss_pred cCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECC---CCCEEECccccc
Confidence 567889999999999999997654 6999999999999999999999999999999999999963 567999999999
Q ss_pred cccCCCCc--ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCC
Q 010013 219 VFFKPGDV--FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWP 294 (520)
Q Consensus 219 ~~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (520)
........ .....+++.|+|||++. ..++.++||||||+++|+|++ |..||.+....+....+..+.... ..+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~~---~~~ 240 (281)
T 1mp8_A 164 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP---MPP 240 (281)
T ss_dssp ---------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCC---CCT
T ss_pred cccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCCC---CCC
Confidence 87644322 22345678899999986 458899999999999999996 999999888877777776654322 235
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 295 NISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 295 ~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.+++.+.+++.+||+.||++|||+.++++
T Consensus 241 ~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 269 (281)
T 1mp8_A 241 NCPPTLYSLMTKCWAYDPSRRPRFTELKA 269 (281)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 78999999999999999999999999976
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-44 Score=351.35 Aligned_cols=250 Identities=26% Similarity=0.371 Sum_probs=209.7
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEE--EEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQF--ACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~--avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
++|.+.+.||+|+||.||+|.++.++..+ |+|.+... ......+.+.+|+.+++++..||||+++++++.+.+..+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 102 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 102 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccc--cchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceE
Confidence 67999999999999999999999888765 88988642 233445678999999999955999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCC
Q 010013 145 LIMDLCAGGELFDRIIAKG----------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDS 208 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~----------------~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~ 208 (520)
+||||+++++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+||+++ .++
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~---~~~ 179 (327)
T 1fvr_A 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---ENY 179 (327)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---GGG
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEc---CCC
Confidence 9999999999999997654 699999999999999999999999999999999999994 466
Q ss_pred CeeEeecccccccCCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCC
Q 010013 209 PLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHI 286 (520)
Q Consensus 209 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~ 286 (520)
.+||+|||++.............+++.|+|||++.+ .++.++||||||+++|+|++ |..||.+.........+..+..
T Consensus 180 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~ 259 (327)
T 1fvr_A 180 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 259 (327)
T ss_dssp CEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCC
T ss_pred eEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCCC
Confidence 799999999975433222334467889999999865 47899999999999999998 9999999988887777765532
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 287 DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 287 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
. .....++..+.++|.+||..||++|||+.+++++
T Consensus 260 ~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 294 (327)
T 1fvr_A 260 L---EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 294 (327)
T ss_dssp C---CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred C---CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 2 1224678999999999999999999999999874
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-43 Score=342.14 Aligned_cols=250 Identities=23% Similarity=0.390 Sum_probs=215.9
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~ 142 (520)
+...++|.+.+.||+|+||.||+|.+..++..||+|++... ....+.+.+|+.++++++ ||||+++++++.+...
T Consensus 9 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~ 83 (288)
T 3kfa_A 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPP 83 (288)
T ss_dssp BCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC----STHHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSS
T ss_pred cccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC----HHHHHHHHHHHHHHHhCC-CCCEeeEEEEEccCCC
Confidence 34567899999999999999999999999999999998643 234577899999999998 9999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccc
Q 010013 143 VNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 220 (520)
.++||||++|++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||.+..
T Consensus 84 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~---~~~~~~l~Dfg~~~~ 160 (288)
T 3kfa_A 84 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRL 160 (288)
T ss_dssp EEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEEC---GGGCEEECCCCGGGT
T ss_pred EEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEc---CCCCEEEccCcccee
Confidence 99999999999999999874 3499999999999999999999999999999999999994 466799999999987
Q ss_pred cCCCCc--ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCC
Q 010013 221 FKPGDV--FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (520)
Q Consensus 221 ~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (520)
...... .....+++.|+|||++. ..++.++||||||+++|+|++ |..||.+.........+...... .....+
T Consensus 161 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~ 237 (288)
T 3kfa_A 161 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM---ERPEGC 237 (288)
T ss_dssp SCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCC---CCCTTC
T ss_pred ccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCC---CCCCCC
Confidence 654332 22345678899999886 458999999999999999999 99999988877777766654322 223578
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 297 SSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 297 ~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
++.+.+++.+||..||++|||+.++++
T Consensus 238 ~~~l~~li~~~l~~dp~~Rps~~~~~~ 264 (288)
T 3kfa_A 238 PEKVYELMRACWQWNPSDRPSFAEIHQ 264 (288)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CHHHHHHHHHHhCCChhhCcCHHHHHH
Confidence 999999999999999999999999976
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-43 Score=347.50 Aligned_cols=252 Identities=24% Similarity=0.405 Sum_probs=214.1
Q ss_pred cccceeecceeeccCCeEEEEEEEc-------CCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHK-------DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAY 137 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~-------~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~ 137 (520)
..++|.+++.||+|+||.||+|.+. .++..||+|++.... .....+.+.+|+.+++++..||||+++++++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 110 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 110 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC--cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEE
Confidence 3578999999999999999999986 356789999986432 3345677899999999995599999999999
Q ss_pred EeCCeEEEEEeccCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEe
Q 010013 138 EDRHSVNLIMDLCAGGELFDRIIAKG----------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLF 201 (520)
Q Consensus 138 ~~~~~~~lv~e~~~g~~L~~~l~~~~----------------~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll 201 (520)
...+..++||||+++++|.+++.... .+++..+..++.||+.||.|||++||+||||||+||++
T Consensus 111 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV 190 (334)
T ss_dssp CSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred ccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEE
Confidence 99999999999999999999997654 38999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEeecccccccCCCCc---ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHH
Q 010013 202 SSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQS 276 (520)
Q Consensus 202 ~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~ 276 (520)
+.++.+||+|||++........ .....+++.|+|||++.+ .++.++||||||+++|+|++ |..||.+....+
T Consensus 191 ---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~ 267 (334)
T 2pvf_A 191 ---TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267 (334)
T ss_dssp ---CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH
T ss_pred ---cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHH
Confidence 4567899999999987654332 223456788999998864 58899999999999999999 999999998888
Q ss_pred HHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
....+..+.... ....++..+.++|.+||+.||++|||+.+++++
T Consensus 268 ~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 312 (334)
T 2pvf_A 268 LFKLLKEGHRMD---KPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312 (334)
T ss_dssp HHHHHHHTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHhcCCCCC---CCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 877777654322 224688999999999999999999999999873
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=347.33 Aligned_cols=255 Identities=22% Similarity=0.358 Sum_probs=216.8
Q ss_pred cccccccceeecceeeccCCeEEEEEEEc-----CCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEE
Q 010013 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHK-----DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKG 135 (520)
Q Consensus 61 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~ 135 (520)
..+...++|.+.+.||+|+||.||+|.++ .+++.||+|++.... .......+.+|+.+++++. ||||+++++
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~i~~~~~ 95 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFN-CHHVVRLLG 95 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS--CHHHHHHHHHHHHHGGGCC-CTTBCCEEE
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc--CHHHHHHHHHHHHHHHhcC-CCCEeeeEE
Confidence 34455688999999999999999999887 357889999986432 2334567889999999998 999999999
Q ss_pred EEEeCCeEEEEEeccCCCchHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCC
Q 010013 136 AYEDRHSVNLIMDLCAGGELFDRIIAK----------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA 205 (520)
Q Consensus 136 ~~~~~~~~~lv~e~~~g~~L~~~l~~~----------~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~ 205 (520)
++.+.+..++||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++
T Consensus 96 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~--- 172 (322)
T 1p4o_A 96 VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA--- 172 (322)
T ss_dssp EECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEEC---
T ss_pred EEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEc---
Confidence 999999999999999999999988653 3579999999999999999999999999999999999994
Q ss_pred CCCCeeEeecccccccCCCCc---ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHH
Q 010013 206 EDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDA 280 (520)
Q Consensus 206 ~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~ 280 (520)
.++.+||+|||++........ .....+|+.|+|||++.+ .++.++||||||+++|+|++ |..||.+.........
T Consensus 173 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~ 252 (322)
T 1p4o_A 173 EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF 252 (322)
T ss_dssp TTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHH
T ss_pred CCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHH
Confidence 567899999999986543221 123456889999999864 58999999999999999999 8999999888888887
Q ss_pred HHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 281 ILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
+..+..... ...++..+.++|.+||..||++|||+.+++++
T Consensus 253 ~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~ 293 (322)
T 1p4o_A 253 VMEGGLLDK---PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 293 (322)
T ss_dssp HHTTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHcCCcCCC---CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 776544322 24789999999999999999999999999975
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=342.97 Aligned_cols=255 Identities=22% Similarity=0.302 Sum_probs=211.1
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~ 142 (520)
..+.++|.+.+.||+|+||.||+|.+..+++.||+|++.... ..+.+.+|+.+++++.+|+|++++++++.....
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~ 80 (298)
T 1csn_A 6 NVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-----DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLH 80 (298)
T ss_dssp CEETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-----TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTE
T ss_pred cccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-----ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCce
Confidence 345678999999999999999999999999999999986432 224578899999999779999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCC--CCCCeeEeeccccc
Q 010013 143 VNLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA--EDSPLKATDFGLSV 219 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~--~~~~~kl~Dfg~a~ 219 (520)
.++||||+ +++|.+++...+ ++++..+..++.||+.||.|||++||+||||||+||+++.++ ....+||+|||++.
T Consensus 81 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~ 159 (298)
T 1csn_A 81 NVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159 (298)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCE
T ss_pred eEEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccc
Confidence 99999999 999999998754 599999999999999999999999999999999999996532 23459999999998
Q ss_pred ccCCCCc--------ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCC---HHHHHHHHHcCCCC
Q 010013 220 FFKPGDV--------FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGET---EQSIFDAILRGHID 287 (520)
Q Consensus 220 ~~~~~~~--------~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~---~~~~~~~~~~~~~~ 287 (520)
....... .....||+.|+|||++.+ .++.++||||||+++|+|++|..||.+.. .......+......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 239 (298)
T 1csn_A 160 FYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQS 239 (298)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHH
T ss_pred ccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccC
Confidence 7654321 244579999999999865 58999999999999999999999998743 33444433332211
Q ss_pred CC-CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 288 FS-SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 288 ~~-~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.+ ....+.+++.+.+++.+||+.||++|||+.++++
T Consensus 240 ~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~ 276 (298)
T 1csn_A 240 TPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG 276 (298)
T ss_dssp SCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred ccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence 11 1112467899999999999999999999999976
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-44 Score=352.59 Aligned_cols=254 Identities=24% Similarity=0.362 Sum_probs=209.1
Q ss_pred cccceeecceeeccCCeEEEEEEEc-----CCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHK-----DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~ 139 (520)
..++|.+++.||+|+||.||+|.+. .++..||+|++.... .....+.+.+|+.+++++..||||+++++++..
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 120 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA--DSSEREALMSELKMMTQLGSHENIVNLLGACTL 120 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc--CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee
Confidence 4578999999999999999999973 456789999986432 233457899999999999459999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHhcC-----------------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCC
Q 010013 140 RHSVNLIMDLCAGGELFDRIIAKG-----------------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKP 196 (520)
Q Consensus 140 ~~~~~lv~e~~~g~~L~~~l~~~~-----------------------~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp 196 (520)
.+..++||||+++|+|.+++.... .+++..+..++.||+.||.|||++||+||||||
T Consensus 121 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp 200 (344)
T 1rjb_A 121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAA 200 (344)
T ss_dssp SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSG
T ss_pred CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCh
Confidence 999999999999999999997653 378999999999999999999999999999999
Q ss_pred CcEEeecCCCCCCeeEeecccccccCCCCc---ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCC
Q 010013 197 ENFLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWG 271 (520)
Q Consensus 197 ~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~ 271 (520)
+||+++ .++.+||+|||++........ .....||+.|+|||++. +.++.++||||||+++|+|++ |..||.+
T Consensus 201 ~NIll~---~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 277 (344)
T 1rjb_A 201 RNVLVT---HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG 277 (344)
T ss_dssp GGEEEE---TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred hhEEEc---CCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCccc
Confidence 999995 466799999999987643321 22345788999999885 458999999999999999998 9999988
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCC
Q 010013 272 ETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325 (520)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~ 325 (520)
.........+......... ...+++.+.++|.+||..||.+|||+.++++|-
T Consensus 278 ~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l 329 (344)
T 1rjb_A 278 IPVDANFYKLIQNGFKMDQ--PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 329 (344)
T ss_dssp CCCSHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCcHHHHHHHHhcCCCCCC--CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence 7654444444443332222 246789999999999999999999999999853
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-44 Score=355.45 Aligned_cols=250 Identities=21% Similarity=0.373 Sum_probs=202.5
Q ss_pred cccceeecceeeccCCeEEEEEEEc---CCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHK---DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~ 141 (520)
..++|.+.+.||+|+||.||+|.++ .++..||||++.... .....+.+.+|+.+++++. ||||+++++++...+
T Consensus 43 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~ 119 (373)
T 2qol_A 43 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY--TEKQRRDFLGEASIMGQFD-HPNIIRLEGVVTKSK 119 (373)
T ss_dssp CGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC--CHHHHHHHHHHHHHHTTCC-CTTBCCEEEEECSSS
T ss_pred CHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEeeCC
Confidence 3467999999999999999999987 457789999986432 3345677999999999998 999999999999999
Q ss_pred eEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccc
Q 010013 142 SVNLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 220 (520)
..++||||+++++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.
T Consensus 120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~~ 196 (373)
T 2qol_A 120 PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLGRV 196 (373)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCC-----
T ss_pred ceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEE---cCCCCEEECcCccccc
Confidence 9999999999999999997754 69999999999999999999999999999999999999 4567899999999987
Q ss_pred cCCCCc----ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCC
Q 010013 221 FKPGDV----FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWP 294 (520)
Q Consensus 221 ~~~~~~----~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (520)
...... .....+++.|+|||++. ..++.++|||||||++|+|++ |..||......+....+..+.... ...
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~~---~~~ 273 (373)
T 2qol_A 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP---PPM 273 (373)
T ss_dssp -----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEECC---CCT
T ss_pred cccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC---CCc
Confidence 643221 11223567899999986 458999999999999999998 999999998888887776653221 124
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 295 NISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 295 ~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.++..+.+++.+||+.||++|||+.++++
T Consensus 274 ~~~~~l~~li~~cl~~dp~~RPs~~~i~~ 302 (373)
T 2qol_A 274 DCPAALYQLMLDCWQKDRNNRPKFEQIVS 302 (373)
T ss_dssp TCBHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cccHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence 67899999999999999999999999976
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-44 Score=349.19 Aligned_cols=249 Identities=22% Similarity=0.316 Sum_probs=203.2
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEE----EEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQF----ACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~----avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~ 141 (520)
.++|.+.+.||+|+||.||+|.+..+++.+ |+|.+.... .....+.+.+|+.++++++ ||||+++++++....
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~ 90 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVD-NPHVCRLLGICLTST 90 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC---------CHHHHHHHHHHHHHCC-BTTBCCEEEEEESSS
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc--CHHHHHHHHHHHHHHHhCC-CCCEeEEEEEEecCC
Confidence 467999999999999999999998777654 777664322 2345678999999999998 999999999998755
Q ss_pred eEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccc
Q 010013 142 SVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 220 (520)
.++|++|+.+|+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.
T Consensus 91 -~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~---~~~~~kl~Dfg~a~~ 166 (327)
T 3poz_A 91 -VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK---TPQHVKITDFGLAKL 166 (327)
T ss_dssp -EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE---ETTEEEECCTTHHHH
T ss_pred -eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEEC---CCCCEEEccCcceeE
Confidence 7889999999999999987 45699999999999999999999999999999999999995 456799999999987
Q ss_pred cCCCCc---ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCC
Q 010013 221 FKPGDV---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295 (520)
Q Consensus 221 ~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (520)
...... .....+|+.|+|||++.+ .++.++|||||||++|+|++ |..||.+.........+..+..... .+.
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~ 243 (327)
T 3poz_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---PPI 243 (327)
T ss_dssp HTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCC---CTT
T ss_pred ccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCCC---Ccc
Confidence 643322 223456789999998864 58999999999999999999 9999998887777776665543222 246
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 296 ISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 296 ~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
++..+.+++.+||+.||++|||+.+++++
T Consensus 244 ~~~~~~~li~~~l~~~p~~Rps~~ell~~ 272 (327)
T 3poz_A 244 CTIDVYMIMVKCWMIDADSRPKFRELIIE 272 (327)
T ss_dssp BCHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 78999999999999999999999999874
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-44 Score=350.86 Aligned_cols=249 Identities=22% Similarity=0.347 Sum_probs=207.2
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcE----EEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQ----FACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~----~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~ 141 (520)
.++|.+.+.||+|+||.||+|.+..+++. +|+|.+.... .....+.+.+|+.+++++. ||||+++++++. ..
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~-~~ 87 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS--GRQSFQAVTDHMLAIGSLD-HAHIVRLLGLCP-GS 87 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT--SCSCBCSCCHHHHHHHTCC-CTTBCCEEEEEC-BS
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc--cHHHHHHHHHHHHHHhcCC-CCCcCeEEEEEc-CC
Confidence 46799999999999999999999888776 6667664322 2233456778999999998 999999999986 56
Q ss_pred eEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccc
Q 010013 142 SVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 220 (520)
..++||||+.+|+|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.
T Consensus 88 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~---~~~~~~kl~Dfg~a~~ 164 (325)
T 3kex_A 88 SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLL---KSPSQVQVADFGVADL 164 (325)
T ss_dssp SEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEE---SSSSCEEECSCSGGGG
T ss_pred ccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEE---CCCCeEEECCCCcccc
Confidence 688999999999999999774 579999999999999999999999999999999999999 4567799999999987
Q ss_pred cCCCC---cccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCC
Q 010013 221 FKPGD---VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295 (520)
Q Consensus 221 ~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (520)
..... ......|++.|+|||++. +.++.++|||||||++|+|++ |..||.+.........+..+...... ..
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~ 241 (325)
T 3kex_A 165 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQP---QI 241 (325)
T ss_dssp SCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCCC---TT
T ss_pred cCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCC---Cc
Confidence 64432 223456788999999986 468999999999999999999 99999988877777777665433222 35
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 296 ISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 296 ~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
++..+.+++.+||..||++|||+.+++++
T Consensus 242 ~~~~~~~li~~~l~~dp~~Rps~~el~~~ 270 (325)
T 3kex_A 242 CTIDVYMVMVKCWMIDENIRPTFKELANE 270 (325)
T ss_dssp BCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred CcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 67889999999999999999999999875
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-43 Score=345.33 Aligned_cols=253 Identities=26% Similarity=0.383 Sum_probs=210.4
Q ss_pred cccceeecceeeccCCeEEEEEEE-----cCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTH-----KDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~ 139 (520)
..++|.+++.||+|+||.||+|.+ ..+++.||+|++.... .....+.+.+|+.+++++.+||||+++++++..
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 98 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHMNIVNLLGACTI 98 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch--hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec
Confidence 457899999999999999999985 4567899999986432 233457799999999999459999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHhcC------------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEe
Q 010013 140 RHSVNLIMDLCAGGELFDRIIAKG------------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLF 201 (520)
Q Consensus 140 ~~~~~lv~e~~~g~~L~~~l~~~~------------------~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll 201 (520)
.+..++||||+++++|.+++.... .+++..+..++.||+.||.|||++||+||||||+||++
T Consensus 99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 99 GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL 178 (313)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred CCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEE
Confidence 999999999999999999997654 48999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEeecccccccCCCCc---ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHH
Q 010013 202 SSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQS 276 (520)
Q Consensus 202 ~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~ 276 (520)
+ .++.+||+|||++........ .....||+.|+|||++. ..++.++||||||+++|+|++ |..||.+.....
T Consensus 179 ~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~ 255 (313)
T 1t46_A 179 T---HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 255 (313)
T ss_dssp E---TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH
T ss_pred c---CCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh
Confidence 5 467799999999987654332 22345778899999875 458999999999999999999 999998766443
Q ss_pred HHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
............. ....++..+.+++.+||..||.+|||+.+++++
T Consensus 256 ~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 301 (313)
T 1t46_A 256 KFYKMIKEGFRML--SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL 301 (313)
T ss_dssp HHHHHHHHTCCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHhccCCCCC--CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 3333333222221 224678999999999999999999999999873
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-44 Score=343.54 Aligned_cols=250 Identities=22% Similarity=0.366 Sum_probs=201.7
Q ss_pred ccccceeecceeeccCCeEEEEEE----EcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVT----HKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~----~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~ 139 (520)
...++|++.+.||+|+||.||+|. +..+++.||+|++... .....+.+.+|+.++++++ ||||+++++++..
T Consensus 7 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~ 82 (295)
T 3ugc_A 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQ-HDNIVKYKGVCYS 82 (295)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC---CHHHHHHHHHHHHHHHTCC-CTTBCCEEEEECH
T ss_pred CCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC---CHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEec
Confidence 345789999999999999999998 5668899999998643 3345678899999999998 9999999999854
Q ss_pred --CCeEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecc
Q 010013 140 --RHSVNLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (520)
Q Consensus 140 --~~~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg 216 (520)
...+++||||+++++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||
T Consensus 83 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~---~~~~~kl~Dfg 159 (295)
T 3ugc_A 83 AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE---NENRVKIGDFG 159 (295)
T ss_dssp HHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE---ETTEEEECCCC
T ss_pred CCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEc---CCCeEEEccCc
Confidence 456899999999999999997754 499999999999999999999999999999999999995 45679999999
Q ss_pred cccccCCCC----cccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHH----------------
Q 010013 217 LSVFFKPGD----VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQ---------------- 275 (520)
Q Consensus 217 ~a~~~~~~~----~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~---------------- 275 (520)
++....... ......+++.|+|||++. ..++.++||||||+++|+|++|..||......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (295)
T 3ugc_A 160 LTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 239 (295)
T ss_dssp SCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHH
T ss_pred ccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHH
Confidence 998764332 122345777899999886 45899999999999999999999998653321
Q ss_pred HHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 276 SIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.....+..... . .....+++.+.+++.+||+.||++|||+.++++
T Consensus 240 ~~~~~~~~~~~-~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~ 284 (295)
T 3ugc_A 240 HLIELLKNNGR-L--PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 284 (295)
T ss_dssp HHHHHHHTTCC-C--CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHHhccCc-C--CCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 12222222221 1 123578999999999999999999999999975
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-44 Score=360.33 Aligned_cols=258 Identities=24% Similarity=0.404 Sum_probs=211.2
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC-
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH- 141 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~- 141 (520)
....++|.+.+.||+|+||.||+|.+..+|+.||||++..... ....+.+.+|+.++++++ ||||+++++++....
T Consensus 5 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~ 81 (396)
T 4eut_A 5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF--LRPVDVQMREFEVLKKLN-HKNIVKLFAIEEETTT 81 (396)
T ss_dssp ECSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG--GSCHHHHHHHHHHHHHCC-CTTBCCEEEEEECTTT
T ss_pred CCCCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc--cchHHHHHHHHHHHHhcC-CCCCCeEEEeeccCCC
Confidence 3456789999999999999999999999999999999865432 234577889999999998 999999999998755
Q ss_pred -eEEEEEeccCCCchHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeec-CCCCCCeeEeecc
Q 010013 142 -SVNLIMDLCAGGELFDRIIAKG---HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSS-SAEDSPLKATDFG 216 (520)
Q Consensus 142 -~~~lv~e~~~g~~L~~~l~~~~---~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~-~~~~~~~kl~Dfg 216 (520)
..++||||++|++|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||+.. .+.+..+||+|||
T Consensus 82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG 161 (396)
T 4eut_A 82 RHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161 (396)
T ss_dssp CCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGG
T ss_pred CeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCC
Confidence 7899999999999999987643 3999999999999999999999999999999999999833 2345569999999
Q ss_pred cccccCCCCcccccccCCCccCchhhc---------ccCCCcchhHHHHHHHHHHhhCCCCCCCC----CHHHHHHHHHc
Q 010013 217 LSVFFKPGDVFKDLVGSAYYVAPEVLR---------RNYGAEADIWSAGVILYILLSGVPPFWGE----TEQSIFDAILR 283 (520)
Q Consensus 217 ~a~~~~~~~~~~~~~gt~~y~aPE~~~---------~~~~~~~Dv~slG~~l~~ll~g~~pf~~~----~~~~~~~~~~~ 283 (520)
++.............||+.|+|||++. ..++.++|||||||++|+|++|..||... ...+....+..
T Consensus 162 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~ 241 (396)
T 4eut_A 162 AARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (396)
T ss_dssp GCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHH
T ss_pred CceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhc
Confidence 999876655556678999999999875 34678999999999999999999999642 23445555554
Q ss_pred CCCCCC---------------------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 284 GHIDFS---------------------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 284 ~~~~~~---------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
+..... ......++..+.++|.+||..||++|||+.++++
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~ 302 (396)
T 4eut_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFA 302 (396)
T ss_dssp SCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHH
T ss_pred CCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHH
Confidence 432110 0011234567889999999999999999999864
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-43 Score=339.52 Aligned_cols=247 Identities=32% Similarity=0.661 Sum_probs=199.1
Q ss_pred ccccceeec-ceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe---
Q 010013 64 DVRNTYIFG-RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED--- 139 (520)
Q Consensus 64 ~~~~~y~~~-~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~--- 139 (520)
.+.++|.+. +.||+|+||.||+|.++.+++.||+|++.. ...+.+|+.++.++..||||+++++++..
T Consensus 14 ~~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~--------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~ 85 (299)
T 3m2w_A 14 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIVRIVDVYENLYA 85 (299)
T ss_dssp CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC--------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEET
T ss_pred ccccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc--------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcC
Confidence 345668877 789999999999999999999999999853 24677899998666669999999999887
Q ss_pred -CCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecc
Q 010013 140 -RHSVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (520)
Q Consensus 140 -~~~~~lv~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg 216 (520)
...+++||||++|++|.+++.... .+++..+..++.||+.||.|||++||+||||||+||+++....++.+||+|||
T Consensus 86 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg 165 (299)
T 3m2w_A 86 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFG 165 (299)
T ss_dssp TEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCT
T ss_pred CCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccc
Confidence 778999999999999999998764 69999999999999999999999999999999999999765447889999999
Q ss_pred cccccCCCCcccccccCCCccCchhhcccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHc----CCCCCCCCC
Q 010013 217 LSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR----GHIDFSSDP 292 (520)
Q Consensus 217 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~----~~~~~~~~~ 292 (520)
++..... ..++.++|||||||++|+|++|..||.+.........+.. ....++...
T Consensus 166 ~a~~~~~--------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (299)
T 3m2w_A 166 FAKETTG--------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 225 (299)
T ss_dssp TCEECTT--------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHH
T ss_pred ccccccc--------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchh
Confidence 9876432 2356789999999999999999999987655433221111 111122112
Q ss_pred CCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCCCCCCcc
Q 010013 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338 (520)
Q Consensus 293 ~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~~~~~~~ 338 (520)
+..++..+.++|.+||+.||++|||+.++|+||||+........+.
T Consensus 226 ~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~~~~~~~~ 271 (299)
T 3m2w_A 226 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 271 (299)
T ss_dssp HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGGGSCCCBC
T ss_pred cccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcccccCCCCCC
Confidence 2468999999999999999999999999999999987655444433
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-44 Score=356.88 Aligned_cols=260 Identities=23% Similarity=0.433 Sum_probs=206.5
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccC----------CCCeeEEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG----------HRNIVELKG 135 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~----------hp~iv~l~~ 135 (520)
.++|.+.+.||+|+||.||+|.+..+++.||||++... ....+.+.+|+.+++++.. ||||+++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~ 93 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD----KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLD 93 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC----ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHH
Confidence 46899999999999999999999999999999998643 2344678899999998862 789999999
Q ss_pred EEEeCC----eEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHc-CCeeecCCCCcEEeecCC---
Q 010013 136 AYEDRH----SVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSM-GVMHRDLKPENFLFSSSA--- 205 (520)
Q Consensus 136 ~~~~~~----~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIll~~~~--- 205 (520)
++...+ .+++|||++ +++|.+++... ..+++..+..++.||+.||.|||++ ||+||||||+|||++..+
T Consensus 94 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 94 HFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTT
T ss_pred HhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCc
Confidence 987654 789999999 89999999763 4599999999999999999999998 999999999999996432
Q ss_pred CCCCeeEeecccccccCCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCH------HHHH
Q 010013 206 EDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETE------QSIF 278 (520)
Q Consensus 206 ~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~------~~~~ 278 (520)
....+||+|||++...... .....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+... ....
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~ 250 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEH--YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHI 250 (373)
T ss_dssp TEEEEEECCCTTCEETTBC--CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHH
T ss_pred CcceEEEcccccccccCCC--CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHH
Confidence 3347999999999876432 345579999999999865 489999999999999999999999976542 2222
Q ss_pred HHHHcCCCCCCC--------------------------------------CCCCCCCHHHHHHHHHhcccCCCCCCCHHH
Q 010013 279 DAILRGHIDFSS--------------------------------------DPWPNISSSAKDIVKKMLHADPKERLSAAE 320 (520)
Q Consensus 279 ~~~~~~~~~~~~--------------------------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ 320 (520)
..+.......+. .....++..+.+||.+||..||++|||+.|
T Consensus 251 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 330 (373)
T 1q8y_A 251 AQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGG 330 (373)
T ss_dssp HHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHH
T ss_pred HHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHH
Confidence 222110000000 001134567899999999999999999999
Q ss_pred HHcCCccccCCC
Q 010013 321 VLNHPWMRVDGD 332 (520)
Q Consensus 321 ~l~~~~~~~~~~ 332 (520)
+|+||||+....
T Consensus 331 ll~hp~f~~~~~ 342 (373)
T 1q8y_A 331 LVNHPWLKDTLG 342 (373)
T ss_dssp HHTCGGGTTCTT
T ss_pred HhhChhhhcccC
Confidence 999999986543
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-44 Score=343.12 Aligned_cols=247 Identities=18% Similarity=0.305 Sum_probs=204.4
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCC-------cEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTK-------QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE 138 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~-------~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~ 138 (520)
.++|.+.+.||+|+||.||+|.+..++ ..||+|++.... ....+.+.+|+.+++++. ||||+++++++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~ 82 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH---RNYSESFFEAASMMSKLS-HKHLVLNYGVCV 82 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG---GGGHHHHHHHHHHHHTSC-CTTBCCEEEEEC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc---HHHHHHHHHHHHHHHhCC-CCCEeEEEEEEE
Confidence 478999999999999999999998876 469999985432 345578999999999998 999999999999
Q ss_pred eCCeEEEEEeccCCCchHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCC-----CCeeE
Q 010013 139 DRHSVNLIMDLCAGGELFDRIIAKGH-YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAED-----SPLKA 212 (520)
Q Consensus 139 ~~~~~~lv~e~~~g~~L~~~l~~~~~-l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~-----~~~kl 212 (520)
+.+..++||||++|++|.+++...+. +++..+..++.||+.||.|||++||+||||||+|||++.++.. ..+||
T Consensus 83 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl 162 (289)
T 4fvq_A 83 CGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKL 162 (289)
T ss_dssp CTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEE
T ss_pred eCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeee
Confidence 99999999999999999999987654 9999999999999999999999999999999999999753321 12999
Q ss_pred eecccccccCCCCcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCC-CCCCCCCHHHHHHHHHcCCCCCC
Q 010013 213 TDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGV-PPFWGETEQSIFDAILRGHIDFS 289 (520)
Q Consensus 213 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~-~pf~~~~~~~~~~~~~~~~~~~~ 289 (520)
+|||++...... ....|++.|+|||++.+ .++.++||||||+++|+|++|. +||.......... ........+
T Consensus 163 ~Dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~-~~~~~~~~~ 238 (289)
T 4fvq_A 163 SDPGISITVLPK---DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQ-FYEDRHQLP 238 (289)
T ss_dssp CCCCSCTTTSCH---HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH-HHHTTCCCC
T ss_pred ccCcccccccCc---cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHH-HhhccCCCC
Confidence 999998765432 33468899999999864 4899999999999999999955 5555444444333 333333222
Q ss_pred CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 290 SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 290 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
...+..+.+++.+||+.||++|||+.+++++
T Consensus 239 ----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 269 (289)
T 4fvq_A 239 ----APKAAELANLINNCMDYEPDHRPSFRAIIRD 269 (289)
T ss_dssp ----CCSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred ----CCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 2457789999999999999999999999975
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-43 Score=370.14 Aligned_cols=248 Identities=25% Similarity=0.385 Sum_probs=205.5
Q ss_pred ccceeecc-eeeccCCeEEEEEEEc--CCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 010013 66 RNTYIFGR-ELGRGQFGVTYLVTHK--DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (520)
Q Consensus 66 ~~~y~~~~-~lg~G~~g~Vy~~~~~--~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~ 142 (520)
.+.+.+.+ .||+|+||.||+|.++ .++..||||++.... .....+.+.+|+.+|++++ |||||++++++.. +.
T Consensus 334 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~il~~l~-hpniv~l~~~~~~-~~ 409 (613)
T 2ozo_A 334 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLD-NPYIVRLIGVCQA-EA 409 (613)
T ss_dssp TTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC--SSTTHHHHHHHHHHHTTCC-CTTBCCEEEEEES-SS
T ss_pred ccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC--ChHHHHHHHHHHHHHHhCC-CCCEeeEEEEecc-CC
Confidence 34555555 8999999999999876 345679999986542 3345678999999999998 9999999999976 56
Q ss_pred EEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 143 VNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
+++||||+++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++..
T Consensus 410 ~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~---~~~~vkL~DFGla~~~ 486 (613)
T 2ozo_A 410 LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLV---NRHYAKISDFGLSKAL 486 (613)
T ss_dssp EEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE---ETTEEEECCCSTTTTC
T ss_pred eEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEc---CCCcEEEeeccCcccc
Confidence 89999999999999998754 4599999999999999999999999999999999999995 4567999999999876
Q ss_pred CCCCcc----cccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCC
Q 010013 222 KPGDVF----KDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295 (520)
Q Consensus 222 ~~~~~~----~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (520)
...... ....+++.|+|||++. +.++.++|||||||++|+|++ |..||.+....+....+..+.... ....
T Consensus 487 ~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~---~p~~ 563 (613)
T 2ozo_A 487 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRME---CPPE 563 (613)
T ss_dssp C--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCCC---CCTT
T ss_pred cCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCC---CCCc
Confidence 433211 1234568899999986 568999999999999999998 999999988888888887765322 2246
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 296 ISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 296 ~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
++..+.++|.+||..||++|||+.++++
T Consensus 564 ~~~~l~~li~~cl~~dP~~RPs~~~l~~ 591 (613)
T 2ozo_A 564 CPPELYALMSDCWIYKWEDRPDFLTVEQ 591 (613)
T ss_dssp CCHHHHHHHHHTTCSSTTTSCCHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 8999999999999999999999999853
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-43 Score=338.96 Aligned_cols=249 Identities=22% Similarity=0.331 Sum_probs=210.1
Q ss_pred ccceeecc-eeeccCCeEEEEEEE--cCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 010013 66 RNTYIFGR-ELGRGQFGVTYLVTH--KDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (520)
Q Consensus 66 ~~~y~~~~-~lg~G~~g~Vy~~~~--~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~ 142 (520)
.++|.+.+ .||+|+||.||+|.+ ..+++.||+|++.... ......+.+.+|+.+++++. ||||+++++++ ..+.
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~-~~~~ 91 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-NDPALKDELLAEANVMQQLD-NPYIVRMIGIC-EAES 91 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTCC-CTTBCCEEEEE-ESSS
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccc-cCHHHHHHHHHHHHHHHhCC-CCCEEEEEEEE-CCCC
Confidence 46799988 999999999999954 5667899999986543 23344678999999999998 99999999999 5677
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
.++||||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+||+++. ++.+||+|||++....
T Consensus 92 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~---~~~~kl~Dfg~~~~~~ 168 (291)
T 1xbb_A 92 WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVT---QHYAKISDFGLSKALR 168 (291)
T ss_dssp EEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE---TTEEEECCCTTCEECC
T ss_pred cEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeC---CCcEEEccCCcceeec
Confidence 8999999999999999998888999999999999999999999999999999999999964 5679999999998765
Q ss_pred CCCcc----cccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCC
Q 010013 223 PGDVF----KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (520)
Q Consensus 223 ~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (520)
..... ....+++.|+|||++.+ .++.++||||||+++|+|++ |..||.+.........+..+.... ....+
T Consensus 169 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~ 245 (291)
T 1xbb_A 169 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG---CPAGC 245 (291)
T ss_dssp TTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCC---CCTTC
T ss_pred cCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC---CCCCC
Confidence 43321 22346788999999864 47889999999999999999 999999988888877777654322 22478
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 297 SSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 297 ~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
+..+.++|.+||+.||++|||+.++++
T Consensus 246 ~~~l~~li~~~l~~dp~~Rps~~~l~~ 272 (291)
T 1xbb_A 246 PREMYDLMNLCWTYDVENRPGFAAVEL 272 (291)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 999999999999999999999999975
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-43 Score=334.18 Aligned_cols=247 Identities=24% Similarity=0.451 Sum_probs=212.9
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.++|.+.+.||+|+||.||+|.+. ++..||+|++..... ..+.+.+|+.+++++. ||||+++++++.+.+..++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l 80 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM----SEEDFIEEAEVMMKLS-HPKLVQLYGVCLEQAPICL 80 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTB----CHHHHHHHHHHHHTCC-CTTBCCEEEEECSSSSCEE
T ss_pred hhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCC----CHHHHHHHHHHHHhCC-CCCEeeEEEEEccCCCeEE
Confidence 367999999999999999999987 467899999875432 3467899999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 146 IMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
||||+++++|.+++... +.+++..+..++.|++.||.|||++|++||||||+||+++ .++.+||+|||++......
T Consensus 81 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~---~~~~~kl~dfg~~~~~~~~ 157 (267)
T 3t9t_A 81 VTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG---ENQVIKVSDFGMTRFVLDD 157 (267)
T ss_dssp EECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEEC---GGGCEEECCTTGGGGBCCH
T ss_pred EEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEC---CCCCEEEcccccccccccc
Confidence 99999999999999765 4689999999999999999999999999999999999994 4667999999999876432
Q ss_pred C--cccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHH
Q 010013 225 D--VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300 (520)
Q Consensus 225 ~--~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (520)
. ......+++.|+|||++. ..++.++||||||+++|+|++ |..||...........+..+...... ..++..+
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~~~---~~~~~~l 234 (267)
T 3t9t_A 158 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKP---RLASTHV 234 (267)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCC---TTSCHHH
T ss_pred cccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCCCC---ccCcHHH
Confidence 1 112345678899999986 458899999999999999999 99999998888888887766433222 4578999
Q ss_pred HHHHHHhcccCCCCCCCHHHHHcC
Q 010013 301 KDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 301 ~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
.+++.+||+.||++|||+.+++++
T Consensus 235 ~~li~~~l~~~p~~Rps~~~ll~~ 258 (267)
T 3t9t_A 235 YQIMNHCWRERPEDRPAFSRLLRQ 258 (267)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHccCChhhCcCHHHHHHH
Confidence 999999999999999999999863
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-44 Score=362.42 Aligned_cols=254 Identities=27% Similarity=0.378 Sum_probs=197.1
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
.+|.+.+.||+|+||+||.. ...+++.||||++..... ..+.+|+.+|+++..||||+++++++.+....|+|
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~-~~~~~~~vAvK~~~~~~~------~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv 96 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYR-GMFDNRDVAVKRILPECF------SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIA 96 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEE-EESSSSEEEEEEECTTTE------EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEE
T ss_pred EEEecCCeeecCcCEEEEEE-EEeCCeEEEEEEECHHHH------HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEE
Confidence 46999999999999997643 335689999999864322 23568999999995599999999999999999999
Q ss_pred EeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCC--CCCCeeEeecccccccCC
Q 010013 147 MDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA--EDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~--~~~~~kl~Dfg~a~~~~~ 223 (520)
||||. |+|.+++.... .+.+..+..++.||+.||.|||++||+||||||+|||++..+ ....+||+|||++.....
T Consensus 97 ~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~ 175 (432)
T 3p23_A 97 IELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175 (432)
T ss_dssp EECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--
T ss_pred EECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccC
Confidence 99996 59999887654 356667789999999999999999999999999999996432 234578999999987653
Q ss_pred CC----cccccccCCCccCchhhc----ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCC
Q 010013 224 GD----VFKDLVGSAYYVAPEVLR----RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWP 294 (520)
Q Consensus 224 ~~----~~~~~~gt~~y~aPE~~~----~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (520)
.. ......||+.|+|||++. ..++.++|||||||++|+|++ |..||...........+....... .....
T Consensus 176 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~ 254 (432)
T 3p23_A 176 GRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDC-LHPEK 254 (432)
T ss_dssp ----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCTT-SCTTC
T ss_pred CCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCccc-cCccc
Confidence 32 234467999999999985 346779999999999999999 999997665444332222211111 11112
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcccc
Q 010013 295 NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 295 ~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
..+..+.+||.+||+.||++|||+.++|+||||..
T Consensus 255 ~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~ 289 (432)
T 3p23_A 255 HEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWS 289 (432)
T ss_dssp HHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCC
T ss_pred cccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccC
Confidence 34566899999999999999999999999999964
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-44 Score=355.09 Aligned_cols=256 Identities=16% Similarity=0.196 Sum_probs=194.2
Q ss_pred cccceeecceeeccCCeEEEEEEEcCC-----CcEEEEEEecccccCCcc--------cHHHHHHHHHHHHhccCCCCee
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDT-----KQQFACKSISSRKLINRD--------DVEDVRREVQIMHHLTGHRNIV 131 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~~avK~~~~~~~~~~~--------~~~~~~~e~~~l~~l~~hp~iv 131 (520)
..++|.+++.||+|+||.||+|.+..+ ++.||+|++......... .......|+..++.+. ||||+
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~-h~~iv 111 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLK-YLGVP 111 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCS-CCCSC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhcc-CCCCC
Confidence 446899999999999999999999764 578999998643210000 0011223444445555 99999
Q ss_pred EEEEEEEeC----CeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCC
Q 010013 132 ELKGAYEDR----HSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAE 206 (520)
Q Consensus 132 ~l~~~~~~~----~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~ 206 (520)
++++++... .+.++||||+ |++|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||++. ..
T Consensus 112 ~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~-~~ 189 (364)
T 3op5_A 112 KYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNY-KN 189 (364)
T ss_dssp CEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEES-SC
T ss_pred eEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEec-CC
Confidence 999998764 5689999999 99999999876 67999999999999999999999999999999999999963 24
Q ss_pred CCCeeEeecccccccCCCCc--------ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCH-HH
Q 010013 207 DSPLKATDFGLSVFFKPGDV--------FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETE-QS 276 (520)
Q Consensus 207 ~~~~kl~Dfg~a~~~~~~~~--------~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~-~~ 276 (520)
++.+||+|||+++.+..... .....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+... ..
T Consensus 190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~ 269 (364)
T 3op5_A 190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPK 269 (364)
T ss_dssp TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHH
T ss_pred CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHH
Confidence 67899999999987643211 133459999999999875 489999999999999999999999986332 11
Q ss_pred HHHHHHc----CCCCCCC--CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 277 IFDAILR----GHIDFSS--DPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 277 ~~~~~~~----~~~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
....... ....+.. .....++..+.+++..||+.+|++||++.++++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~ 322 (364)
T 3op5_A 270 YVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRD 322 (364)
T ss_dssp HHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence 1111110 0000000 011467899999999999999999999999875
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-43 Score=342.66 Aligned_cols=252 Identities=22% Similarity=0.365 Sum_probs=207.2
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCC----cEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTK----QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~----~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~ 139 (520)
....+|.+.+.||+|+||.||+|.++.++ ..||+|++.... .......+.+|+.+++++. ||||+++++++..
T Consensus 41 i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~ 117 (333)
T 1mqb_A 41 IHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQFS-HHNIIRLEGVISK 117 (333)
T ss_dssp CCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTCC-CTTBCCEEEEECS
T ss_pred CChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC--CHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEec
Confidence 34578999999999999999999987553 359999986432 3344567899999999998 9999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccc
Q 010013 140 RHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218 (520)
Q Consensus 140 ~~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a 218 (520)
.+..++||||+++++|.+++... +.+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||++
T Consensus 118 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~---~~~~~kl~Dfg~~ 194 (333)
T 1mqb_A 118 YKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVN---SNLVCKVSDFGLS 194 (333)
T ss_dssp SSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTCCEEECCCCC-
T ss_pred CCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEEC---CCCcEEECCCCcc
Confidence 99999999999999999999765 5799999999999999999999999999999999999994 5678999999999
Q ss_pred cccCCCCc----ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCC
Q 010013 219 VFFKPGDV----FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDP 292 (520)
Q Consensus 219 ~~~~~~~~----~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 292 (520)
........ .....+++.|+|||++. ..++.++||||||+++|+|++ |..||.+....+....+..+.... .
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~---~ 271 (333)
T 1mqb_A 195 RVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLP---T 271 (333)
T ss_dssp ----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCC---C
T ss_pred hhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcCC---C
Confidence 87643221 12234678899999986 458899999999999999999 999999988888887777653321 1
Q ss_pred CCCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 293 ~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
...++..+.+++.+||+.||++|||+.+++++
T Consensus 272 ~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 303 (333)
T 1mqb_A 272 PMDCPSAIYQLMMQCWQQERARRPKFADIVSI 303 (333)
T ss_dssp CTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred cccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 24678999999999999999999999999863
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-43 Score=369.80 Aligned_cols=242 Identities=23% Similarity=0.331 Sum_probs=205.2
Q ss_pred ceeeccCCeEEEEEEE--cCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEecc
Q 010013 73 RELGRGQFGVTYLVTH--KDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLC 150 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~--~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~ 150 (520)
+.||+|+||.||+|.+ +.+++.||||++.... ......+.+.+|+.+|++++ |||||++++++.. +..++||||+
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~-~~~~lv~E~~ 451 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-NDPALKDELLAEANVMQQLD-NPYIVRMIGICEA-ESWMLVMEMA 451 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGG-GCGGGHHHHHHHHHHHHHCC-CTTBCCEEEEEES-SSEEEEEECC
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEecccc-CCHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEec-CCEEEEEEcc
Confidence 4799999999999955 4567889999986543 23445678999999999998 9999999999865 5588999999
Q ss_pred CCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCc----
Q 010013 151 AGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV---- 226 (520)
Q Consensus 151 ~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~---- 226 (520)
++|+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.+.....
T Consensus 452 ~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~---~~~~~kL~DFGla~~~~~~~~~~~~ 528 (635)
T 4fl3_A 452 ELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLV---TQHYAKISDFGLSKALRADENYYKA 528 (635)
T ss_dssp TTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE---ETTEEEECCTTHHHHTTC-------
T ss_pred CCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEe---CCCCEEEEEcCCccccccCcccccc
Confidence 9999999999888899999999999999999999999999999999999996 456799999999987654321
Q ss_pred ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Q 010013 227 FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (520)
Q Consensus 227 ~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (520)
.....+|+.|+|||++.+ .++.++|||||||++|+|++ |..||.+....+....+..+..... ...++..+.+||
T Consensus 529 ~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~---p~~~~~~l~~li 605 (635)
T 4fl3_A 529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGC---PAGCPREMYDLM 605 (635)
T ss_dssp ------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCC---CTTCCHHHHHHH
T ss_pred ccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC---CCCCCHHHHHHH
Confidence 123346788999999875 68999999999999999998 9999999999888888877653322 246899999999
Q ss_pred HHhcccCCCCCCCHHHHHc
Q 010013 305 KKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 305 ~~~l~~dp~~Rps~~~~l~ 323 (520)
.+||+.||++|||+.++++
T Consensus 606 ~~cl~~dP~~RPs~~~l~~ 624 (635)
T 4fl3_A 606 NLCWTYDVENRPGFAAVEL 624 (635)
T ss_dssp HHHTCSSTTTSCCHHHHHH
T ss_pred HHHcCCCHhHCcCHHHHHH
Confidence 9999999999999999975
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-43 Score=364.00 Aligned_cols=248 Identities=22% Similarity=0.389 Sum_probs=214.3
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
...+|.+.+.||+|+||.||+|.++.++..||||++.... ...+.+.+|+.+|++++ ||||+++++++.....++
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~ 292 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFY 292 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS----SCHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSCE
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc----cchHHHHHHHHHHHhcC-CCCEeeEEEEEecCCcEE
Confidence 4567999999999999999999999989999999986532 24578999999999998 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 145 LIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
+||||+++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++...
T Consensus 293 lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~---~~~~~kl~DFG~a~~~~ 369 (495)
T 1opk_A 293 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVG---ENHLVKVADFGLSRLMT 369 (495)
T ss_dssp EEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---GGGCEEECCTTCEECCT
T ss_pred EEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEC---CCCcEEEeecccceecc
Confidence 999999999999999864 4589999999999999999999999999999999999994 56789999999998764
Q ss_pred CCCc--ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCH
Q 010013 223 PGDV--FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298 (520)
Q Consensus 223 ~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (520)
.... .....+++.|+|||++. +.++.++|||||||++|+|++ |..||.+.........+..+... .....++.
T Consensus 370 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 446 (495)
T 1opk_A 370 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM---ERPEGCPE 446 (495)
T ss_dssp TCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCC---CCCTTCCH
T ss_pred CCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---CCCCCCCH
Confidence 3321 12234567899999986 458999999999999999999 99999988877777766654322 22357899
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 299 SAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 299 ~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.+.+||.+||+.||++|||+.++++
T Consensus 447 ~l~~li~~cl~~dP~~RPs~~el~~ 471 (495)
T 1opk_A 447 KVYELMRACWQWNPSDRPSFAEIHQ 471 (495)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHcCcChhHCcCHHHHHH
Confidence 9999999999999999999999976
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-43 Score=345.58 Aligned_cols=248 Identities=22% Similarity=0.319 Sum_probs=203.1
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEE----EEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQF----ACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~----avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~ 141 (520)
.++|.+.+.||+|+||.||+|.+..+++.+ |+|.+... ......+.+.+|+.++++++ ||||+++++++....
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~--~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~ 90 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASVD-NPHVCRLLGICLTST 90 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCC--SSCCCHHHHHHHHHHHTTCC-BTTBCCCCEEEESSS
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccc--cCHHHHHHHHHHHHHHHhCC-CCCeeEEEEEEecCC
Confidence 467999999999999999999998888765 55555322 23345678999999999998 999999999998765
Q ss_pred eEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccc
Q 010013 142 SVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 220 (520)
.++|++|+.+++|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..
T Consensus 91 -~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~---~~~~~kL~DfG~a~~ 166 (327)
T 3lzb_A 91 -VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK---TPQHVKITDFGLAKL 166 (327)
T ss_dssp -EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE---ETTEEEECCTTC---
T ss_pred -ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEc---CCCCEEEccCcceeE
Confidence 78899999999999999774 5699999999999999999999999999999999999995 456799999999987
Q ss_pred cCCCCc---ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCC
Q 010013 221 FKPGDV---FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295 (520)
Q Consensus 221 ~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (520)
...... .....+|+.|+|||++.+ .++.++|||||||++|+|++ |..||.+.........+........ .+.
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~ 243 (327)
T 3lzb_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---PPI 243 (327)
T ss_dssp -------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCC---CTT
T ss_pred ccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCC---Ccc
Confidence 643321 223456788999998864 58999999999999999999 9999999888777777666543222 246
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 296 ISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 296 ~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
++..+.++|.+||+.||++|||+.++++
T Consensus 244 ~~~~l~~li~~~l~~dp~~Rps~~ell~ 271 (327)
T 3lzb_A 244 CTIDVYMIMRKCWMIDADSRPKFRELII 271 (327)
T ss_dssp BCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 7899999999999999999999999986
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-43 Score=339.81 Aligned_cols=247 Identities=26% Similarity=0.435 Sum_probs=210.1
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe----
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED---- 139 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~---- 139 (520)
.+..+|.+.+.||+|+||.||+|.+..+++.||+|++.... +.+.+|+.+++++. ||||+++++++..
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 79 (284)
T 2a19_B 8 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKLD-HVNIVHYNGCWDGFDYD 79 (284)
T ss_dssp HHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-------GGGHHHHHHHHHCC-CTTBCCEEEEEEEEEEC
T ss_pred hhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-------HHHHHHHHHHHhCC-CCCEEEEeeeEeccccC
Confidence 45678999999999999999999999899999999986432 35678999999998 9999999998864
Q ss_pred ------------CCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCC
Q 010013 140 ------------RHSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA 205 (520)
Q Consensus 140 ------------~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~ 205 (520)
...+++||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++
T Consensus 80 ~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~--- 156 (284)
T 2a19_B 80 PETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLV--- 156 (284)
T ss_dssp ---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE---
T ss_pred cccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEc---
Confidence 45589999999999999999754 5799999999999999999999999999999999999995
Q ss_pred CCCCeeEeecccccccCCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC
Q 010013 206 EDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG 284 (520)
Q Consensus 206 ~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~ 284 (520)
.++.+||+|||++.............|++.|+|||++.+ .++.++||||||+++|+|++|..||... ......+...
T Consensus 157 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--~~~~~~~~~~ 234 (284)
T 2a19_B 157 DTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET--SKFFTDLRDG 234 (284)
T ss_dssp ETTEEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH--HHHHHHHHTT
T ss_pred CCCCEEECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH--HHHHHHhhcc
Confidence 456799999999988766555556679999999999865 4899999999999999999999987432 2233334333
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcccc
Q 010013 285 HIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
.. ...++..+.++|.+||..||++|||+.++++|.+.-.
T Consensus 235 ~~------~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~ 273 (284)
T 2a19_B 235 II------SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK 273 (284)
T ss_dssp CC------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred cc------cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 22 1457899999999999999999999999999987643
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-43 Score=356.82 Aligned_cols=243 Identities=23% Similarity=0.382 Sum_probs=207.5
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC-eE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH-SV 143 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~-~~ 143 (520)
..++|.+.+.||+|+||.||+|.+. ++.||||++.... ..+.+.+|+.+|++++ ||||+++++++.... ..
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 262 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-----TAQAFLAEASVMTQLR-HSNLVQLLGVIVEEKGGL 262 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT-----TSHHHHHHHHHHHTCC-CTTBCCEEEEEECTTSCE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch-----HHHHHHHHHHHHHhcc-CCCEEEEEEEEEcCCCce
Confidence 3477999999999999999999885 6799999986432 3477899999999998 999999999987654 79
Q ss_pred EEEEeccCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 144 NLIMDLCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~~~--l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
++||||+++|+|.+++...+. +++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++..
T Consensus 263 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill---~~~~~~kl~DfG~a~~~ 339 (450)
T 1k9a_A 263 YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEA 339 (450)
T ss_dssp EEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---CTTSCEEECCCTTCEEC
T ss_pred EEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEE---CCCCCEEEeeCCCcccc
Confidence 999999999999999987654 7999999999999999999999999999999999999 45678999999999865
Q ss_pred CCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHH
Q 010013 222 KPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (520)
Q Consensus 222 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (520)
... .....+++.|+|||++.+ .++.++|||||||++|+|++ |..||.+....+....+..+... .....+++.
T Consensus 340 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~---~~p~~~~~~ 414 (450)
T 1k9a_A 340 SST--QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM---DAPDGCPPA 414 (450)
T ss_dssp C--------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCC---CCCTTCCHH
T ss_pred ccc--ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---CCCCcCCHH
Confidence 332 223367889999999864 58999999999999999998 99999988877777777665332 123578999
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHc
Q 010013 300 AKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 300 ~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
+.++|.+||+.||++|||+.++++
T Consensus 415 l~~li~~cl~~dp~~Rpt~~~l~~ 438 (450)
T 1k9a_A 415 VYDVMKNCWHLDAATRPTFLQLRE 438 (450)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHcCCChhHCcCHHHHHH
Confidence 999999999999999999999875
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-43 Score=338.81 Aligned_cols=253 Identities=25% Similarity=0.474 Sum_probs=198.9
Q ss_pred ccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 010013 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (520)
Q Consensus 62 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~ 141 (520)
.+-..++|.+.+.||+|+||.||+|.+.. .+|+|++.... ......+.+.+|+.+++++. ||||++++++. ...
T Consensus 19 ~ei~~~~y~~~~~lG~G~~g~Vy~~~~~~---~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~-~~~ 92 (289)
T 3og7_A 19 WEIPDGQITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTR-HVNILLFMGYS-TAP 92 (289)
T ss_dssp CBCCTTSCEEEEEEEECSSEEEEEEESSS---EEEEEEESCSS-CCHHHHHHHHHHHHHHTTCC-CTTBCCEEEEE-CSS
T ss_pred CccCccceeeeeEecCCCCeEEEEEEEcC---ceEEEEEeccC-CCHHHHHHHHHHHHHHHhCC-CCcEEEEEeec-cCC
Confidence 34456789999999999999999998753 59999986543 24455678999999999998 99999999965 556
Q ss_pred eEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccc
Q 010013 142 SVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 220 (520)
..++||||++|++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||++..
T Consensus 93 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~---~~~~~kl~Dfg~~~~ 169 (289)
T 3og7_A 93 QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLH---EDNTVKIGDFGLATE 169 (289)
T ss_dssp SCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE---TTTEEEECCCC----
T ss_pred ccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEEC---CCCCEEEccceeccc
Confidence 689999999999999988643 5699999999999999999999999999999999999995 456799999999986
Q ss_pred cCC---CCcccccccCCCccCchhhc----ccCCCcchhHHHHHHHHHHhhCCCCCCCCCH-HHHHHHHHcCCCCCC-CC
Q 010013 221 FKP---GDVFKDLVGSAYYVAPEVLR----RNYGAEADIWSAGVILYILLSGVPPFWGETE-QSIFDAILRGHIDFS-SD 291 (520)
Q Consensus 221 ~~~---~~~~~~~~gt~~y~aPE~~~----~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~-~~~~~~~~~~~~~~~-~~ 291 (520)
... ........||+.|+|||++. ..++.++||||||+++|+|++|..||.+... ......+..+..... ..
T Consensus 170 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (289)
T 3og7_A 170 KSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSK 249 (289)
T ss_dssp --------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTS
T ss_pred cccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhh
Confidence 542 22234457999999999884 3478899999999999999999999987554 444444444443322 22
Q ss_pred CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 292 PWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 292 ~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
....+++.+.++|.+||+.||++|||+.++++
T Consensus 250 ~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~ 281 (289)
T 3og7_A 250 VRSNCPKRMKRLMAECLKKKRDERPSFPRILA 281 (289)
T ss_dssp SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ccccCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 23578899999999999999999999999986
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-43 Score=357.60 Aligned_cols=256 Identities=27% Similarity=0.420 Sum_probs=199.4
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
.+.+.|.+.+.||+|+||+||.+. ..+|+.||||++... ..+.+.+|+.+++++..||||+++++++.+...+
T Consensus 12 ~l~~~~~~~~~LG~G~~g~V~~~~-~~~g~~vAvK~~~~~------~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~ 84 (434)
T 2rio_A 12 SLKNLVVSEKILGYGSSGTVVFQG-SFQGRPVAVKRMLID------FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFL 84 (434)
T ss_dssp SCSSCEEEEEEEEECSTTCEEEEE-ESSSSEEEEEEEEGG------GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEE
T ss_pred hhhheeeccCeEeeCCCeEEEEEE-EECCeEEEEEEEcHH------HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeE
Confidence 455678888999999999998754 456899999998542 2356789999999885599999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcCCCC-------HHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecC----------CC
Q 010013 144 NLIMDLCAGGELFDRIIAKGHYS-------ERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSS----------AE 206 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~~~l~-------~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~----------~~ 206 (520)
++|||||. |+|.+++....... +..++.++.||+.||.|||++||+||||||+|||++.. +.
T Consensus 85 ~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~ 163 (434)
T 2rio_A 85 YIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAE 163 (434)
T ss_dssp EEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCC
T ss_pred EEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCC
Confidence 99999995 59999997754332 23457899999999999999999999999999999753 23
Q ss_pred CCCeeEeecccccccCCCCc-----ccccccCCCccCchhhcc--------cCCCcchhHHHHHHHHHHhh-CCCCCCCC
Q 010013 207 DSPLKATDFGLSVFFKPGDV-----FKDLVGSAYYVAPEVLRR--------NYGAEADIWSAGVILYILLS-GVPPFWGE 272 (520)
Q Consensus 207 ~~~~kl~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~--------~~~~~~Dv~slG~~l~~ll~-g~~pf~~~ 272 (520)
+..+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|++ |..||...
T Consensus 164 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~ 243 (434)
T 2rio_A 164 NLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK 243 (434)
T ss_dssp SCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCST
T ss_pred ceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCc
Confidence 55799999999987654321 234579999999999853 47889999999999999999 99999776
Q ss_pred CHHHHHHHHHcCCCCCCCCC---CCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcccc
Q 010013 273 TEQSIFDAILRGHIDFSSDP---WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
.... ..+..+........ ...++.++.++|.+||+.||++|||+.++|+||||..
T Consensus 244 ~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~ 301 (434)
T 2rio_A 244 YSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWP 301 (434)
T ss_dssp TTHH--HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSC
T ss_pred hhhH--HHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccCC
Confidence 5443 23444443332211 1234578999999999999999999999999999963
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-43 Score=356.64 Aligned_cols=248 Identities=22% Similarity=0.379 Sum_probs=212.2
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~ 142 (520)
+...++|.+.+.||+|+||.||+|.+.. +..||||++.... ...+.+.+|+.+|++++ ||||+++++++. ...
T Consensus 184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~~-~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~-h~~iv~l~~~~~-~~~ 256 (454)
T 1qcf_A 184 EIPRESLKLEKKLGAGQFGEVWMATYNK-HTKVAVKTMKPGS----MSVEAFLAEANVMKTLQ-HDKLVKLHAVVT-KEP 256 (454)
T ss_dssp BCCGGGEEEEEEEECCSSEEEEEEEETT-TEEEEEEEECTTS----BCHHHHHHHHHHHTTCC-CTTBCCEEEEEC-SSS
T ss_pred eechHHeEEEEEcccCCceEEEEEEECC-ccEEEEEEecCCC----ccHHHHHHHHHHHhhCC-CCCEeeEEEEEe-CCc
Confidence 3456789999999999999999999864 6789999986532 34678999999999998 999999999986 667
Q ss_pred EEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccc
Q 010013 143 VNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 220 (520)
.++||||+++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.
T Consensus 257 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill---~~~~~~kl~DFG~a~~ 333 (454)
T 1qcf_A 257 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV---SASLVCKIADFGLARV 333 (454)
T ss_dssp CEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEE---CTTCCEEECSTTGGGG
T ss_pred cEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEE---CCCCcEEEeeCCCceE
Confidence 89999999999999999754 368999999999999999999999999999999999999 4567899999999987
Q ss_pred cCCCCc--ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCC
Q 010013 221 FKPGDV--FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (520)
Q Consensus 221 ~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (520)
...... .....+++.|+|||++. +.++.++|||||||++|+|++ |..||.+....+....+..+.... ....+
T Consensus 334 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~---~~~~~ 410 (454)
T 1qcf_A 334 IEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMP---RPENC 410 (454)
T ss_dssp BCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCC---CCTTS
T ss_pred cCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC---CCCCC
Confidence 643221 12234677899999986 568999999999999999999 999999998888888877653322 22578
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 297 SSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 297 ~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
++.+.++|.+||+.||++|||+.++++
T Consensus 411 ~~~l~~li~~cl~~dp~~RPt~~~i~~ 437 (454)
T 1qcf_A 411 PEELYNIMMRCWKNRPEERPTFEYIQS 437 (454)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHHH
Confidence 999999999999999999999999975
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-43 Score=338.45 Aligned_cols=254 Identities=22% Similarity=0.310 Sum_probs=204.9
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
.+.++|.+.+.||+|+||.||+|.+..+++.||+|++..... .+.+.+|+.+++.+.+|+++..+..++......
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (296)
T 3uzp_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYN 80 (296)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS-----CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEE
T ss_pred eeccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc-----hhHHHHHHHHHHHhhcCCCCCccccccCCCCce
Confidence 456889999999999999999999999999999999864332 245889999999999444455555556778899
Q ss_pred EEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 144 NLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
++||||+ +++|.+++.. .+.+++..+..++.||+.||.|||++||+||||||+|||++..+.++.+||+|||++....
T Consensus 81 ~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 159 (296)
T 3uzp_A 81 VMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred EEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccc
Confidence 9999999 9999999874 4579999999999999999999999999999999999999644457789999999998765
Q ss_pred CCCc--------ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCH---HHHHHHHHcCCCCCC-
Q 010013 223 PGDV--------FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETE---QSIFDAILRGHIDFS- 289 (520)
Q Consensus 223 ~~~~--------~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~---~~~~~~~~~~~~~~~- 289 (520)
.... .....||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+... ......+.......+
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 239 (296)
T 3uzp_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI 239 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH
T ss_pred ccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch
Confidence 4322 244579999999999865 588999999999999999999999976432 122222222211111
Q ss_pred CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 290 SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 290 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
......+|+.+.+++.+||+.||++|||+.++++
T Consensus 240 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 273 (296)
T 3uzp_A 240 EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 273 (296)
T ss_dssp HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred HHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence 0112467899999999999999999999999976
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-43 Score=344.09 Aligned_cols=252 Identities=25% Similarity=0.377 Sum_probs=208.7
Q ss_pred cccceeecceeeccCCeEEEEEEE-----cCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTH-----KDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~ 139 (520)
..++|.+++.||+|+||.||+|.+ ..+++.||+|++.... .....+.+.+|+.++.++.+||||+++++++..
T Consensus 25 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 102 (316)
T 2xir_A 25 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACTK 102 (316)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC
T ss_pred chhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC--CcHHHHHHHHHHHHHHhcccCCCeeeEEEEEec
Confidence 457899999999999999999985 3467899999986432 233456789999999999669999999999876
Q ss_pred C-CeEEEEEeccCCCchHHHHHhcCC----------------CCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEee
Q 010013 140 R-HSVNLIMDLCAGGELFDRIIAKGH----------------YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFS 202 (520)
Q Consensus 140 ~-~~~~lv~e~~~g~~L~~~l~~~~~----------------l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~ 202 (520)
. ..+++||||+++++|.+++..... +++..+..++.||+.||.|||++||+||||||+||+++
T Consensus 103 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~ 182 (316)
T 2xir_A 103 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS 182 (316)
T ss_dssp TTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred CCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEEC
Confidence 5 458999999999999999987543 89999999999999999999999999999999999994
Q ss_pred cCCCCCCeeEeecccccccCCCCc---ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCH-HH
Q 010013 203 SSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETE-QS 276 (520)
Q Consensus 203 ~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~-~~ 276 (520)
.++.+||+|||++........ .....||+.|+|||++. ..++.++||||||+++|+|++ |..||.+... ..
T Consensus 183 ---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~ 259 (316)
T 2xir_A 183 ---EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 259 (316)
T ss_dssp ---GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHH
T ss_pred ---CCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHH
Confidence 466799999999987643322 22346788999999886 458999999999999999998 9999987653 33
Q ss_pred HHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
....+..+.... ....+++.+.+++.+||+.||.+|||+.++++|
T Consensus 260 ~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 304 (316)
T 2xir_A 260 FCRRLKEGTRMR---APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304 (316)
T ss_dssp HHHHHHHTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHhccCccCC---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 444444433211 124578999999999999999999999999875
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-43 Score=347.07 Aligned_cols=254 Identities=28% Similarity=0.450 Sum_probs=189.9
Q ss_pred CCcccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 010013 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE 138 (520)
Q Consensus 59 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~ 138 (520)
+...+....+|++.+.||+|+||.||+|.+..+++.||+|++... .....+.+.+|+.+++++.+||||+++++++.
T Consensus 20 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~ 96 (337)
T 3ll6_A 20 GQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN---EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAAS 96 (337)
T ss_dssp TCEEEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEE
T ss_pred cceeeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC---chHHHHHHHHHHHHHHHhccCCChhhcccccc
Confidence 334444556899999999999999999999999999999988543 23445678999999999977999999999984
Q ss_pred --------eCCeEEEEEeccCCCchHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHcC--CeeecCCCCcEEeecCC
Q 010013 139 --------DRHSVNLIMDLCAGGELFDRIIA---KGHYSERAAANLCRQMVTVVHYCHSMG--VMHRDLKPENFLFSSSA 205 (520)
Q Consensus 139 --------~~~~~~lv~e~~~g~~L~~~l~~---~~~l~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIll~~~~ 205 (520)
....+++||||+. |+|.+++.. .+.+++..+..++.||+.||.|||++| |+||||||+|||++
T Consensus 97 ~~~~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~--- 172 (337)
T 3ll6_A 97 IGKEESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLS--- 172 (337)
T ss_dssp ECTTTSTTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEEC---
T ss_pred ccccccccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEEC---
Confidence 3455899999995 688888765 457999999999999999999999999 99999999999994
Q ss_pred CCCCeeEeecccccccCCCCcc-------------cccccCCCccCchhhc----ccCCCcchhHHHHHHHHHHhhCCCC
Q 010013 206 EDSPLKATDFGLSVFFKPGDVF-------------KDLVGSAYYVAPEVLR----RNYGAEADIWSAGVILYILLSGVPP 268 (520)
Q Consensus 206 ~~~~~kl~Dfg~a~~~~~~~~~-------------~~~~gt~~y~aPE~~~----~~~~~~~Dv~slG~~l~~ll~g~~p 268 (520)
.++.+||+|||++......... ....||+.|+|||++. ..++.++|||||||++|+|++|..|
T Consensus 173 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p 252 (337)
T 3ll6_A 173 NQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHP 252 (337)
T ss_dssp TTSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCC
T ss_pred CCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCC
Confidence 5678999999999876433211 1346899999999873 3478899999999999999999999
Q ss_pred CCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCC
Q 010013 269 FWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325 (520)
Q Consensus 269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~ 325 (520)
|.......... ..... ......+..+.++|.+||+.||++|||+.+++++-
T Consensus 253 ~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l 303 (337)
T 3ll6_A 253 FEDGAKLRIVN----GKYSI--PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQL 303 (337)
T ss_dssp C----------------CCC--CTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred CcchhHHHhhc----CcccC--CcccccchHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 97655433322 22222 22345678899999999999999999999999863
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-43 Score=335.57 Aligned_cols=251 Identities=24% Similarity=0.352 Sum_probs=207.6
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCC---CcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDT---KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~ 140 (520)
...++|.+.+.||+|+||.||+|.+... +..||+|++.... .....+.+.+|+.+++++. ||||+++++++.++
T Consensus 9 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~ 85 (281)
T 3cc6_A 9 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC--TLDNKEKFMSEAVIMKNLD-HPHIVKLIGIIEEE 85 (281)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS--CHHHHHHHHHHHHHHHHHC-CTTBCCEEEEECSS
T ss_pred ecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc--CchHHHHHHHHHHHHHhCC-CCCcceEEEEEcCC
Confidence 3457899999999999999999987543 4469999986542 3345678999999999998 99999999998754
Q ss_pred CeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccc
Q 010013 141 HSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (520)
Q Consensus 141 ~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~ 219 (520)
..++||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++. ++.+||+|||++.
T Consensus 86 -~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~---~~~~kl~Dfg~~~ 161 (281)
T 3cc6_A 86 -PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVAS---PECVKLGDFGLSR 161 (281)
T ss_dssp -SCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEE---TTEEEECCCCGGG
T ss_pred -CCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECC---CCcEEeCccCCCc
Confidence 568999999999999999765 45999999999999999999999999999999999999954 5679999999998
Q ss_pred ccCCCCc--ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCC
Q 010013 220 FFKPGDV--FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295 (520)
Q Consensus 220 ~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (520)
....... .....+++.|+|||++. ..++.++||||||+++|+|++ |..||...........+........ ...
T Consensus 162 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~ 238 (281)
T 3cc6_A 162 YIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPK---PDL 238 (281)
T ss_dssp CC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCCC---CTT
T ss_pred ccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCCC---CCC
Confidence 7644321 23345788899999986 458899999999999999998 9999988777766666665533221 246
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 296 ISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 296 ~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
+++.+.+++.+||..||++|||+.+++++
T Consensus 239 ~~~~l~~li~~~l~~~p~~Rps~~ell~~ 267 (281)
T 3cc6_A 239 CPPVLYTLMTRCWDYDPSDRPRFTELVCS 267 (281)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence 78999999999999999999999999873
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-43 Score=333.35 Aligned_cols=245 Identities=18% Similarity=0.271 Sum_probs=209.3
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--CeE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR--HSV 143 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~--~~~ 143 (520)
.++|.+.+.||+|+||.||+|.+. ++.+|+|++..... .....+.+.+|+.++++++ ||||+++++++.+. ...
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~ 84 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDW-STRKSRDFNEECPRLRIFS-HPNVLPVLGACQSPPAPHP 84 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTC-CHHHHHHHHHHGGGGCCCS-CTTEECEEEEECTTTSSSC
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEeccccc-CHHHHHHHHHHHHHHHhcC-CCchhheEEEEccCCCCCe
Confidence 467999999999999999999985 78899999875432 3345577999999999998 99999999999877 788
Q ss_pred EEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcC--CeeecCCCCcEEeecCCCCCCeeEeeccccc
Q 010013 144 NLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMG--VMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~ 219 (520)
++||||+++++|.+++.... .+++..+..++.||+.||.|||++| ++||||||+||++ +.++.++|+|||++.
T Consensus 85 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~---~~~~~~~l~~~~~~~ 161 (271)
T 3kmu_A 85 TLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMI---DEDMTARISMADVKF 161 (271)
T ss_dssp EEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEE---CTTSCEEEEGGGSCC
T ss_pred EeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEE---cCCcceeEEecccee
Confidence 99999999999999998765 4899999999999999999999999 9999999999999 456779999888876
Q ss_pred ccCCCCcccccccCCCccCchhhccc-C---CCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCC
Q 010013 220 FFKPGDVFKDLVGSAYYVAPEVLRRN-Y---GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295 (520)
Q Consensus 220 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~---~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (520)
.... ....||+.|+|||++.+. + +.++||||||+++|+|++|..||.+.........+........ ....
T Consensus 162 ~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~ 235 (271)
T 3kmu_A 162 SFQS----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPT--IPPG 235 (271)
T ss_dssp TTSC----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCC--CCTT
T ss_pred eecc----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCC--CCCC
Confidence 5332 335789999999998643 3 3379999999999999999999999888777666665543332 2357
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 296 ISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 296 ~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
++..+.+++.+||+.||++|||+.++++
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (271)
T 3kmu_A 236 ISPHVSKLMKICMNEDPAKRPKFDMIVP 263 (271)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 8999999999999999999999999986
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=334.67 Aligned_cols=251 Identities=25% Similarity=0.378 Sum_probs=211.4
Q ss_pred cccceeecc-eeeccCCeEEEEEEEc--CCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 010013 65 VRNTYIFGR-ELGRGQFGVTYLVTHK--DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (520)
Q Consensus 65 ~~~~y~~~~-~lg~G~~g~Vy~~~~~--~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~ 141 (520)
..++|.+.+ .||+|+||.||+|.+. .++..||+|++.... .....+.+.+|+.+++++. ||||+++++++ ..+
T Consensus 7 ~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~-~~~ 82 (287)
T 1u59_A 7 KRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLD-NPYIVRLIGVC-QAE 82 (287)
T ss_dssp CGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHCC-CTTBCCEEEEE-ESS
T ss_pred cHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc--chhHHHHHHHHHHHHHhCC-CCCEeEEEEEe-cCC
Confidence 346677776 9999999999999864 467889999986532 3445678999999999997 99999999999 456
Q ss_pred eEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccc
Q 010013 142 SVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 220 (520)
..++||||+++++|.+++... ..+++..+..++.||+.||.|||+.||+||||||+||+++ .++.+||+|||++..
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~kl~Dfg~~~~ 159 (287)
T 1u59_A 83 ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLV---NRHYAKISDFGLSKA 159 (287)
T ss_dssp SEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE---ETTEEEECCCTTCEE
T ss_pred CcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEc---CCCCEEECcccceee
Confidence 789999999999999988654 4699999999999999999999999999999999999996 456799999999987
Q ss_pred cCCCCcc----cccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCC
Q 010013 221 FKPGDVF----KDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWP 294 (520)
Q Consensus 221 ~~~~~~~----~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (520)
....... ....+|+.|+|||++. ..++.++||||||+++|+|++ |..||......+....+..+.... ..+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~~---~~~ 236 (287)
T 1u59_A 160 LGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRME---CPP 236 (287)
T ss_dssp CTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCC---CCT
T ss_pred eccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcCC---CCC
Confidence 6543321 2235678999999986 458899999999999999998 999999888888777777654322 225
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCHHHHHcCC
Q 010013 295 NISSSAKDIVKKMLHADPKERLSAAEVLNHP 325 (520)
Q Consensus 295 ~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~ 325 (520)
.+++.+.++|.+||..||++|||+.+++++.
T Consensus 237 ~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l 267 (287)
T 1u59_A 237 ECPPELYALMSDCWIYKWEDRPDFLTVEQRM 267 (287)
T ss_dssp TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred CcCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 7899999999999999999999999998763
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-43 Score=344.13 Aligned_cols=253 Identities=26% Similarity=0.391 Sum_probs=209.5
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCc-----EEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQ-----QFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE 138 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~-----~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~ 138 (520)
-..++|.+++.||+|+||.||+|.+..++. .||+|.+.... .....+.+.+|+.+++++..||||+++++++.
T Consensus 43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 120 (333)
T 2i1m_A 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA--HADEKEALMSELKIMSHLGQHENIVNLLGACT 120 (333)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc--ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 345789999999999999999999977654 79999986432 33445778999999999944999999999999
Q ss_pred eCCeEEEEEeccCCCchHHHHHhc--------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecC
Q 010013 139 DRHSVNLIMDLCAGGELFDRIIAK--------------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSS 204 (520)
Q Consensus 139 ~~~~~~lv~e~~~g~~L~~~l~~~--------------~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~ 204 (520)
..+..++||||+++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~-- 198 (333)
T 2i1m_A 121 HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT-- 198 (333)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEE--
T ss_pred cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEEC--
Confidence 999999999999999999988653 3589999999999999999999999999999999999995
Q ss_pred CCCCCeeEeecccccccCCCCc---ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHH
Q 010013 205 AEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFD 279 (520)
Q Consensus 205 ~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~ 279 (520)
.++.+||+|||++........ .....||+.|+|||++. ..++.++||||||+++|+|++ |..||.+........
T Consensus 199 -~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~ 277 (333)
T 2i1m_A 199 -NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY 277 (333)
T ss_dssp -GGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHH
T ss_pred -CCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHH
Confidence 456799999999986543221 22345678899999876 458999999999999999998 999998866544444
Q ss_pred HHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 280 AILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.+......... ...++..+.+++.+||+.||.+|||+.++++
T Consensus 278 ~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 319 (333)
T 2i1m_A 278 KLVKDGYQMAQ--PAFAPKNIYSIMQACWALEPTHRPTFQQICS 319 (333)
T ss_dssp HHHHHTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhcCCCCCC--CCCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 44333322222 2457899999999999999999999999986
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-42 Score=331.92 Aligned_cols=248 Identities=21% Similarity=0.351 Sum_probs=210.9
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~ 142 (520)
+...++|.+.+.||+|+||.||+|.+. ++..||+|++.... ...+.+.+|+.+++++. ||||+++++++. .+.
T Consensus 9 ~v~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~-~~~ 81 (279)
T 1qpc_A 9 EVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS----MSPDAFLAEANLMKQLQ-HQRLVRLYAVVT-QEP 81 (279)
T ss_dssp BCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTS----SCHHHHHHHHHHHHHCC-CTTBCCEEEEEC-SSS
T ss_pred ccCHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCc----ccHHHHHHHHHHHHhCC-CcCcceEEEEEc-CCC
Confidence 345578999999999999999999986 46789999986432 23577899999999998 999999999986 456
Q ss_pred EEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccc
Q 010013 143 VNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 220 (520)
.++||||+++++|.+++.... .+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++..
T Consensus 82 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~kl~Dfg~~~~ 158 (279)
T 1qpc_A 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARL 158 (279)
T ss_dssp CEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEECCCTTCEE
T ss_pred cEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEE---cCCCCEEECCCccccc
Confidence 889999999999999886543 69999999999999999999999999999999999999 4567899999999987
Q ss_pred cCCCCc--ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCC
Q 010013 221 FKPGDV--FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (520)
Q Consensus 221 ~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (520)
...... .....+++.|+|||++. +.++.++||||||+++|+|++ |..||.+....+....+..+.... ....+
T Consensus 159 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~ 235 (279)
T 1qpc_A 159 IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV---RPDNC 235 (279)
T ss_dssp CSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCC---CCTTC
T ss_pred ccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCCC---Ccccc
Confidence 654332 12345678899999986 458899999999999999999 999999988888887776653322 22478
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 297 SSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 297 ~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
+..+.+++.+||..||++|||+.++++
T Consensus 236 ~~~l~~li~~~l~~~p~~Rps~~~l~~ 262 (279)
T 1qpc_A 236 PEELYQLMRLCWKERPEDRPTFDYLRS 262 (279)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 899999999999999999999999976
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-42 Score=336.58 Aligned_cols=249 Identities=25% Similarity=0.412 Sum_probs=202.7
Q ss_pred ccceeecceeeccCCeEEEEEE----EcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC-
Q 010013 66 RNTYIFGRELGRGQFGVTYLVT----HKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR- 140 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~----~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~- 140 (520)
...|++.+.||+|+||.||+|. +..+++.||+|++.... .....+.+.+|+.+++++. ||||+++++++...
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~ 96 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLY-HENIVKYKGICTEDG 96 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-------CCHHHHHHHHHHHHTCC-CTTBCCEEEEEEC--
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc--cchhHHHHHHHHHHHHhCC-CCCeeeeeeEEecCC
Confidence 4669999999999999999999 56688999999987543 3345678999999999998 99999999999876
Q ss_pred -CeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccc
Q 010013 141 -HSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218 (520)
Q Consensus 141 -~~~~lv~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a 218 (520)
..+++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||+++. ++.+||+|||++
T Consensus 97 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~---~~~~kl~Dfg~~ 173 (302)
T 4e5w_A 97 GNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVES---EHQVKIGDFGLT 173 (302)
T ss_dssp -CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE---TTEEEECCCTTC
T ss_pred CceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcC---CCCEEECccccc
Confidence 678999999999999999954 457999999999999999999999999999999999999954 567999999999
Q ss_pred cccCCCCc----ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCC--------------CH-HHHH
Q 010013 219 VFFKPGDV----FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGE--------------TE-QSIF 278 (520)
Q Consensus 219 ~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~--------------~~-~~~~ 278 (520)
........ .....||+.|+|||++.+ .++.++||||||+++|+|++|..|+... .. ....
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (302)
T 4e5w_A 174 KAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLV 253 (302)
T ss_dssp EECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHH
T ss_pred ccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHH
Confidence 87654432 234567888999998864 5788999999999999999999875322 11 1222
Q ss_pred HHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 279 DAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
..+..+. .. ...+.+++.+.++|.+||+.||++|||+.++++
T Consensus 254 ~~~~~~~-~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 295 (302)
T 4e5w_A 254 NTLKEGK-RL--PCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 295 (302)
T ss_dssp HHHHTTC-CC--CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred HHHhccC-CC--CCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 2233222 11 123578999999999999999999999999986
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-43 Score=340.26 Aligned_cols=252 Identities=23% Similarity=0.373 Sum_probs=202.7
Q ss_pred cccceeecceeeccCCeEEEEEEEcC---CCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKD---TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH 141 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~ 141 (520)
..++|.+++.||+|+||.||+|.+.. ++..||+|++..... .....+.+.+|+.+++++. ||||+++++++....
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~ 109 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS-SQREIEEFLSEAACMKDFS-HPNVIRLLGVCIEMS 109 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CC-CHHHHHHHHHHHHHHHTCC-CTTBCCCCEEEEC--
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEecccc-chhHHHHHHHHHHHHhcCC-CCCeeeeeEEEeecc
Confidence 45789999999999999999998765 456899999865432 3345677899999999998 999999999987654
Q ss_pred -----eEEEEEeccCCCchHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCe
Q 010013 142 -----SVNLIMDLCAGGELFDRIIA------KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPL 210 (520)
Q Consensus 142 -----~~~lv~e~~~g~~L~~~l~~------~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~ 210 (520)
..++||||+++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+||+++ .++.+
T Consensus 110 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~---~~~~~ 186 (313)
T 3brb_A 110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLR---DDMTV 186 (313)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEEC---TTSCE
T ss_pred ccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEc---CCCcE
Confidence 35999999999999998843 35699999999999999999999999999999999999994 56789
Q ss_pred eEeecccccccCCCC---cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCC
Q 010013 211 KATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285 (520)
Q Consensus 211 kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~ 285 (520)
||+|||++....... ......+++.|+|||.+.+ .++.++||||||+++|+|++ |..||.+.........+..+.
T Consensus 187 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~ 266 (313)
T 3brb_A 187 CVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGH 266 (313)
T ss_dssp EECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC
T ss_pred EEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCC
Confidence 999999998764332 1223457889999999864 58899999999999999999 999999888877777776654
Q ss_pred CCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 286 IDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 286 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
... ....++..+.++|.+||..||++|||+.+++++
T Consensus 267 ~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 302 (313)
T 3brb_A 267 RLK---QPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ 302 (313)
T ss_dssp CCC---CBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred CCC---CCccccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 322 235788999999999999999999999999863
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-43 Score=344.23 Aligned_cols=247 Identities=23% Similarity=0.302 Sum_probs=197.5
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC----
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH---- 141 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~---- 141 (520)
.++|.+.+.||+|+||.||+|.+. ++.||||++.... .......+|+.++++++ ||||+++++++....
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~~ 95 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQD----KQSWQNEYEVYSLPGMK-HENILQFIGAEKRGTSVDV 95 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGG----HHHHHHHHHHHTSTTCC-CTTBCCEEEEEEEECSSSE
T ss_pred hhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCc----hHHHHHHHHHHHHhcCC-CCCchhhcceeccCCCCCc
Confidence 467999999999999999999885 6899999985432 23345667999999998 999999999998744
Q ss_pred eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHc----------CCeeecCCCCcEEeecCCCCCCee
Q 010013 142 SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM----------GVMHRDLKPENFLFSSSAEDSPLK 211 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~----------~ivH~Dlkp~NIll~~~~~~~~~k 211 (520)
.+++||||+++|+|.+++.. +.+++..+..++.||+.||.|||+. ||+||||||+|||+ +.++.+|
T Consensus 96 ~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill---~~~~~~k 171 (322)
T 3soc_A 96 DLWLITAFHEKGSLSDFLKA-NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLL---KNNLTAC 171 (322)
T ss_dssp EEEEEEECCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEE---CTTCCEE
T ss_pred eEEEEEecCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEE---CCCCeEE
Confidence 47999999999999998866 4699999999999999999999999 99999999999999 4567899
Q ss_pred EeecccccccCCCCc---ccccccCCCccCchhhcc------cCCCcchhHHHHHHHHHHhhCCCCCCCCC---------
Q 010013 212 ATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRR------NYGAEADIWSAGVILYILLSGVPPFWGET--------- 273 (520)
Q Consensus 212 l~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~------~~~~~~Dv~slG~~l~~ll~g~~pf~~~~--------- 273 (520)
|+|||+++....... .....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+..
T Consensus 172 L~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~ 251 (322)
T 3soc_A 172 IADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEE 251 (322)
T ss_dssp ECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHH
T ss_pred EccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhh
Confidence 999999987644322 234579999999999864 35568899999999999999999996542
Q ss_pred -------HHHHHHHHHcCCCCCCCC-CCC--CCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 274 -------EQSIFDAILRGHIDFSSD-PWP--NISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 274 -------~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.......+.......... .+. ..+..+.+||.+||+.||++|||+.++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 311 (322)
T 3soc_A 252 EIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGE 311 (322)
T ss_dssp HHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 222333332222211111 111 12356999999999999999999999976
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-43 Score=337.55 Aligned_cols=251 Identities=24% Similarity=0.390 Sum_probs=203.3
Q ss_pred ccceeecceeeccCCeEEEEEEEcC-CCc--EEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKD-TKQ--QFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~--~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~ 142 (520)
.++|.+.+.||+|+||.||+|.+.. +++ .||+|++...........+.+.+|+.+++++. ||||+++++++....
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~- 94 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-HRNLIRLYGVVLTPP- 94 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCC-CTTBCCEEEEECSSS-
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCC-CCCcccEEEEEccCC-
Confidence 4689999999999999999998753 333 68999987654444556788999999999998 999999999998765
Q ss_pred EEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 143 VNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
.++||||+++++|.+++... +.+++..+..++.||+.||.|||++||+||||||+||+++. ++.+||+|||++...
T Consensus 95 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~---~~~~kl~Dfg~~~~~ 171 (291)
T 1u46_A 95 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLAT---RDLVKIGDFGLMRAL 171 (291)
T ss_dssp CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEE---TTEEEECCCTTCEEC
T ss_pred ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcC---CCCEEEccccccccc
Confidence 78999999999999998764 56999999999999999999999999999999999999953 567999999999876
Q ss_pred CCCCc----ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCC
Q 010013 222 KPGDV----FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295 (520)
Q Consensus 222 ~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (520)
..... .....+++.|+|||++.+ .++.++||||||+++|+|++ |..||.+.........+.......+. ...
T Consensus 172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~ 249 (291)
T 1u46_A 172 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR--PED 249 (291)
T ss_dssp CC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCC--CTT
T ss_pred cccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCC--CcC
Confidence 54332 123457788999999864 47889999999999999999 99999999888888887766544332 357
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 296 ISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 296 ~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
++..+.++|.+||..||++|||+.++++
T Consensus 250 ~~~~l~~li~~~l~~~p~~Rps~~~l~~ 277 (291)
T 1u46_A 250 CPQDIYNVMVQCWAHKPEDRPTFVALRD 277 (291)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 8999999999999999999999999987
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-44 Score=374.21 Aligned_cols=261 Identities=25% Similarity=0.422 Sum_probs=211.3
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe------
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED------ 139 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~------ 139 (520)
.++|.+.+.||+|+||.||+|.+..+|+.||||++... ......+.+.+|+.+++++. ||||+++++++..
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~--~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~v~~~~~~~~~ 89 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWCLEIQIMKKLN-HPNVVSAREVPDGLQKLAP 89 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC--CCHHHHHHHHHHHHHHHHCC-BTTBCCEEECCTTTCCCCT
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc--CCHHHHHHHHHHHHHHHhCC-CCCCCceeeeecccccccC
Confidence 36799999999999999999999999999999998643 23445677999999999998 9999999998765
Q ss_pred CCeEEEEEeccCCCchHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecc
Q 010013 140 RHSVNLIMDLCAGGELFDRIIAKG---HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (520)
Q Consensus 140 ~~~~~lv~e~~~g~~L~~~l~~~~---~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg 216 (520)
.+..++||||++|++|.+++.... .+++..+..++.||+.||.|||+.||+||||||+||+++.++....+||+|||
T Consensus 90 ~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 90 NDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp TSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred CCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 677899999999999999998754 58999999999999999999999999999999999999865555569999999
Q ss_pred cccccCCCCcccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHH---------H-----
Q 010013 217 LSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDA---------I----- 281 (520)
Q Consensus 217 ~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~---------~----- 281 (520)
++.............||+.|+|||++. ..++.++|||||||++|+|++|..||.+......... +
T Consensus 170 ~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~ 249 (676)
T 3qa8_A 170 YAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDD 249 (676)
T ss_dssp CCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCC
T ss_pred cccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhh
Confidence 999876665556678999999999986 4589999999999999999999999977543221100 0
Q ss_pred HcCCCCC------CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcccc
Q 010013 282 LRGHIDF------SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 282 ~~~~~~~------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
..+...+ +......++..+.++|.+||..||++|||+.++|+||||+.
T Consensus 250 l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~ 303 (676)
T 3qa8_A 250 LTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQA 303 (676)
T ss_dssp CSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHH
T ss_pred hccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHH
Confidence 0111111 11112346788999999999999999999999999999974
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-42 Score=335.55 Aligned_cols=254 Identities=22% Similarity=0.308 Sum_probs=199.8
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
.+.++|.+.+.||+|+||.||+|.+..+++.||+|++..... .+.+.+|+.+++.+.+|+++..+..++......
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYN 80 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC--------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEE
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc-----chHHHHHHHHHHHhcCCCCCCeeeeecCCCCce
Confidence 456889999999999999999999999999999998754332 234778999999999444455555566788899
Q ss_pred EEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 144 NLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
++||||+ +++|.+++.. .+.+++..+..++.||+.||.|||++||+||||||+|||++..+.++.+||+|||++....
T Consensus 81 ~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 159 (296)
T 4hgt_A 81 VMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp EEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred EEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence 9999999 9999999875 4579999999999999999999999999999999999999544457789999999998765
Q ss_pred CCCc--------ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHH---HHHHHHHcCCCCCC-
Q 010013 223 PGDV--------FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQ---SIFDAILRGHIDFS- 289 (520)
Q Consensus 223 ~~~~--------~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~---~~~~~~~~~~~~~~- 289 (520)
.... .....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.... .....+.......+
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 239 (296)
T 4hgt_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI 239 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH
T ss_pred CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchh
Confidence 4321 234579999999999865 5889999999999999999999999764321 12222222111111
Q ss_pred CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 290 SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 290 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
......+|+.+.+++.+||+.||++|||+.++++
T Consensus 240 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~ 273 (296)
T 4hgt_A 240 EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 273 (296)
T ss_dssp HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred hhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence 1112467899999999999999999999999976
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=341.16 Aligned_cols=248 Identities=23% Similarity=0.385 Sum_probs=205.4
Q ss_pred cceeecceeeccCCeEEEEEE----EcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEE--eC
Q 010013 67 NTYIFGRELGRGQFGVTYLVT----HKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE--DR 140 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~----~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~--~~ 140 (520)
++|++.+.||+|+||.||+|. +..+++.||+|++... .....+.+.+|+.+++++. ||||+++++++. +.
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~ 98 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILKALH-SDFIVKYRGVSYGPGR 98 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC---CHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSS
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC---CHHHHHHHHHHHHHHHhcC-CCceeEEEEEEecCCC
Confidence 689999999999999999999 4667899999998643 3345577899999999997 999999999886 45
Q ss_pred CeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccc
Q 010013 141 HSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (520)
Q Consensus 141 ~~~~lv~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~ 219 (520)
...++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||++.
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~---~~~~~kl~Dfg~~~ 175 (327)
T 3lxl_A 99 QSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVE---SEAHVKIADFGLAK 175 (327)
T ss_dssp CEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE---ETTEEEECCGGGCE
T ss_pred ceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEEC---CCCCEEEcccccce
Confidence 679999999999999999977 45699999999999999999999999999999999999995 45679999999998
Q ss_pred ccCCCCc----ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHH---------------HHHH
Q 010013 220 FFKPGDV----FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQ---------------SIFD 279 (520)
Q Consensus 220 ~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~---------------~~~~ 279 (520)
....... .....||+.|+|||++.+ .++.++||||||+++|+|++|..||...... ....
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (327)
T 3lxl_A 176 LLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLE 255 (327)
T ss_dssp ECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHH
T ss_pred ecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHH
Confidence 7654331 223467888999998864 4788999999999999999999998654332 2222
Q ss_pred HHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 280 AILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
.+..+.. . .....+++.+.++|.+||..||++|||+.+++++
T Consensus 256 ~~~~~~~-~--~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 297 (327)
T 3lxl_A 256 LLEEGQR-L--PAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQ 297 (327)
T ss_dssp HHHTTCC-C--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HhhcccC-C--CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 2332221 1 1235789999999999999999999999999753
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-42 Score=352.38 Aligned_cols=252 Identities=22% Similarity=0.373 Sum_probs=208.9
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
...++|.+.+.||+|+||.||+|.+.. +..||||++.... ...+.+.+|+.+|++++ ||||+++++++.+ +..
T Consensus 181 i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~-~~~ 253 (452)
T 1fmk_A 181 IPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT----MSPEAFLQEAQVMKKLR-HEKLVQLYAVVSE-EPI 253 (452)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTS----SCHHHHHHHHHHHHHCC-CTTBCCEEEEECS-SSC
T ss_pred cChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCC----CCHHHHHHHHHHHHhCC-CCCEeeEEEEEcC-Cce
Confidence 345789999999999999999999976 4679999986533 23467899999999998 9999999999876 678
Q ss_pred EEEEeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 144 NLIMDLCAGGELFDRIIA--KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~--~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
++||||+++|+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++..
T Consensus 254 ~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~---~~~~~kl~DfG~a~~~ 330 (452)
T 1fmk_A 254 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLI 330 (452)
T ss_dssp EEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GGGCEEECCCCTTC--
T ss_pred EEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEC---CCCCEEECCCccceec
Confidence 999999999999999964 35699999999999999999999999999999999999994 5678999999999876
Q ss_pred CCCCc--ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 010013 222 KPGDV--FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (520)
Q Consensus 222 ~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (520)
..... .....+++.|+|||++. +.++.++|||||||++|+|++ |..||.+....+....+..+.... ..+.++
T Consensus 331 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~---~~~~~~ 407 (452)
T 1fmk_A 331 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP---CPPECP 407 (452)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCC---CCTTSC
T ss_pred CCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC---CCCCCC
Confidence 43221 12335678899999886 568999999999999999999 999999998888888877654322 224789
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHc--CCccc
Q 010013 298 SSAKDIVKKMLHADPKERLSAAEVLN--HPWMR 328 (520)
Q Consensus 298 ~~~~~li~~~l~~dp~~Rps~~~~l~--~~~~~ 328 (520)
+.+.++|.+||+.||++|||+.++++ ..++.
T Consensus 408 ~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~ 440 (452)
T 1fmk_A 408 ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 440 (452)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhc
Confidence 99999999999999999999999986 35554
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-42 Score=332.23 Aligned_cols=242 Identities=23% Similarity=0.384 Sum_probs=199.3
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe-CCeEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED-RHSVN 144 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~-~~~~~ 144 (520)
.++|.+.+.||+|+||.||+|.+. |+.||+|++... ...+.+.+|+.+++++. ||||+++++++.. .+..+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~ 91 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-----ATAQAFLAEASVMTQLR-HSNLVQLLGVIVEEKGGLY 91 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCC-----C--HHHHHTHHHHTTCC-CTTBCCEEEEECCC--CCE
T ss_pred hhhceEEeEEecCCCceEEEEEEc--CCEEEEEEecch-----hHHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCCceE
Confidence 478999999999999999999874 789999998643 24577899999999998 9999999998754 45789
Q ss_pred EEEeccCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 145 LIMDLCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~~--l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
+||||+++++|.+++...+. +++..+..++.|++.||.|||++|++||||||+||+++ .++.+||+|||++....
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~~l~Dfg~~~~~~ 168 (278)
T 1byg_A 92 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS---EDNVAKVSDFGLTKEAS 168 (278)
T ss_dssp EEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---TTSCEEECCCCC-----
T ss_pred EEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEe---CCCcEEEeecccccccc
Confidence 99999999999999976543 89999999999999999999999999999999999994 56789999999988654
Q ss_pred CCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHH
Q 010013 223 PGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300 (520)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (520)
.. .....+++.|+|||++.+ .++.++||||||+++|+|++ |..||......+....+..+... .....+++.+
T Consensus 169 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l 243 (278)
T 1byg_A 169 ST--QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM---DAPDGCPPAV 243 (278)
T ss_dssp ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCC---CCCTTCCHHH
T ss_pred cc--ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCC---CCcccCCHHH
Confidence 32 233467889999999864 58899999999999999998 99999988877777666554321 2235789999
Q ss_pred HHHHHHhcccCCCCCCCHHHHHc
Q 010013 301 KDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 301 ~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.++|.+||+.||++|||+.++++
T Consensus 244 ~~li~~~l~~~p~~Rps~~~l~~ 266 (278)
T 1byg_A 244 YEVMKNCWHLDAAMRPSFLQLRE 266 (278)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHhcCChhhCCCHHHHHH
Confidence 99999999999999999999976
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-43 Score=348.87 Aligned_cols=256 Identities=17% Similarity=0.199 Sum_probs=197.2
Q ss_pred cccceeecceeeccCCeEEEEEEEcC---CCcEEEEEEecccccCCc--------ccHHHHHHHHHHHHhccCCCCeeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKD---TKQQFACKSISSRKLINR--------DDVEDVRREVQIMHHLTGHRNIVEL 133 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~~avK~~~~~~~~~~--------~~~~~~~~e~~~l~~l~~hp~iv~l 133 (520)
..++|.+++.||+|+||.||+|.+.. ++..+|+|++........ .....+.+|+.+++.+. ||||+++
T Consensus 35 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~-h~ni~~~ 113 (345)
T 2v62_A 35 EGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLD-YLGIPLF 113 (345)
T ss_dssp TSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCS-CCCCCCE
T ss_pred cCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhcccc-ccCccee
Confidence 34689999999999999999999987 788999999865421000 01234567888888887 9999999
Q ss_pred EEEEEe----CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCC
Q 010013 134 KGAYED----RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP 209 (520)
Q Consensus 134 ~~~~~~----~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~ 209 (520)
++++.. ....++||||+ |++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++ .+.
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~-~~~ 191 (345)
T 2v62_A 114 YGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKN-PDQ 191 (345)
T ss_dssp EEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSS-TTS
T ss_pred ecccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCC-CCc
Confidence 999987 78899999999 999999998877899999999999999999999999999999999999996532 238
Q ss_pred eeEeecccccccCCCC--------cccccccCCCccCchhhccc-CCCcchhHHHHHHHHHHhhCCCCCCCC--CHHHHH
Q 010013 210 LKATDFGLSVFFKPGD--------VFKDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGE--TEQSIF 278 (520)
Q Consensus 210 ~kl~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~-~~~~~Dv~slG~~l~~ll~g~~pf~~~--~~~~~~ 278 (520)
+||+|||+++.+.... ......||+.|+|||++.+. ++.++|||||||++|+|++|..||.+. ......
T Consensus 192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~ 271 (345)
T 2v62_A 192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQ 271 (345)
T ss_dssp EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHH
T ss_pred EEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHH
Confidence 9999999998763221 12445799999999998754 899999999999999999999999652 222222
Q ss_pred HHHHcCCCCCCC-----CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 279 DAILRGHIDFSS-----DPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 279 ~~~~~~~~~~~~-----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
..........+. .....++..+.++|.+||..||++|||+.++++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 321 (345)
T 2v62_A 272 TAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK 321 (345)
T ss_dssp HHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 111111111110 011267899999999999999999999999986
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-42 Score=334.18 Aligned_cols=249 Identities=24% Similarity=0.349 Sum_probs=205.6
Q ss_pred ccceeecceeeccCCeEEEEEEEcCC---CcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEE-EeCC
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDT---KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAY-EDRH 141 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~-~~~~ 141 (520)
..+|.+.+.||+|+||.||+|.+..+ +..+|+|.+... ......+.+.+|+.+++++. ||||+++++++ ..++
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~--~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~ 100 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEG 100 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC--CSHHHHHHHHHHHHHHHTCC-CTTBCCCCEEECCSSS
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccC--CCHHHHHHHHHHHHHHHhCC-CCCEeeeeeEEEcCCC
Confidence 45699999999999999999997643 345888988642 23445678899999999998 99999999985 4567
Q ss_pred eEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccc
Q 010013 142 SVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 220 (520)
..++||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++..
T Consensus 101 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~kl~Dfg~a~~ 177 (298)
T 3f66_A 101 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML---DEKFTVKVADFGLARD 177 (298)
T ss_dssp CCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTCCEEECSCGGGCC
T ss_pred ceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEE---CCCCCEEECccccccc
Confidence 889999999999999999763 458999999999999999999999999999999999999 4567899999999987
Q ss_pred cCCCC-----cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCC
Q 010013 221 FKPGD-----VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPW 293 (520)
Q Consensus 221 ~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 293 (520)
..... ......||+.|+|||.+.+ .++.++||||||+++|+|++ |.+||.+.........+..+......
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 254 (298)
T 3f66_A 178 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP--- 254 (298)
T ss_dssp CSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCCC---
T ss_pred ccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCCC---
Confidence 64322 1233467789999998864 58899999999999999999 67778777766666666665543332
Q ss_pred CCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 294 PNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 294 ~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
..++..+.+++.+||+.||++|||+.++++
T Consensus 255 ~~~~~~l~~li~~~l~~~p~~Rps~~ell~ 284 (298)
T 3f66_A 255 EYCPDPLYEVMLKCWHPKAEMRPSFSELVS 284 (298)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 467899999999999999999999999986
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-43 Score=341.98 Aligned_cols=262 Identities=20% Similarity=0.261 Sum_probs=205.6
Q ss_pred cCCcccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 010013 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAY 137 (520)
Q Consensus 58 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~ 137 (520)
.........++|.+.+.||+|+||.||+|.+. +++.||+|++...... .....+.+|+.+++++. ||||+++++++
T Consensus 21 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~-h~~iv~~~~~~ 96 (326)
T 3uim_A 21 SLRELQVASDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERTQ--GGELQFQTEVEMISMAV-HRNLLRLRGFC 96 (326)
T ss_dssp CTHHHHTTTTSSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC-------CCCHHHHHHHGGGTCC-CTTBCCCCEEE
T ss_pred cHHHHHHHhhccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccCc--hHHHHHHHHHHHHHhcc-CCCccceEEEE
Confidence 33445566789999999999999999999865 5889999998754321 22236889999999998 99999999999
Q ss_pred EeCCeEEEEEeccCCCchHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHc---CCeeecCCCCcEEeecCCCCCCe
Q 010013 138 EDRHSVNLIMDLCAGGELFDRIIAKG----HYSERAAANLCRQMVTVVHYCHSM---GVMHRDLKPENFLFSSSAEDSPL 210 (520)
Q Consensus 138 ~~~~~~~lv~e~~~g~~L~~~l~~~~----~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~ 210 (520)
......++||||+.+++|.+++.... .+++..+..++.|++.||.|||++ ||+||||||+|||+ +.++.+
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~---~~~~~~ 173 (326)
T 3uim_A 97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILL---DEEFEA 173 (326)
T ss_dssp CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEE---CTTCCE
T ss_pred ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEE---CCCCCE
Confidence 99999999999999999999997643 499999999999999999999999 99999999999999 456789
Q ss_pred eEeecccccccCCCC--cccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhhCCCCCCCC-----CHHHHHHHHH
Q 010013 211 KATDFGLSVFFKPGD--VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGE-----TEQSIFDAIL 282 (520)
Q Consensus 211 kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~g~~pf~~~-----~~~~~~~~~~ 282 (520)
||+|||++....... ......||+.|+|||++. +.++.++||||||+++|+|++|..||... ........+.
T Consensus 174 kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 253 (326)
T 3uim_A 174 VVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253 (326)
T ss_dssp EECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHT
T ss_pred EeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHH
Confidence 999999998764322 233456999999999985 45899999999999999999999999521 1111111111
Q ss_pred cCCCC----------CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCc
Q 010013 283 RGHID----------FSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326 (520)
Q Consensus 283 ~~~~~----------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~ 326 (520)
..... .........+..+.+++.+||+.||++|||+.++++|-.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~ 307 (326)
T 3uim_A 254 GLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307 (326)
T ss_dssp TTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred HHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhc
Confidence 10000 000011122467999999999999999999999998754
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-42 Score=332.29 Aligned_cols=248 Identities=24% Similarity=0.348 Sum_probs=205.1
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCc---EEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQ---QFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~---~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
-.|.+.+.||+|+||.||+|.+..++. .+|+|++... ......+.+.+|+.++++++ ||||+++++++.+.+..
T Consensus 21 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~ 97 (298)
T 3pls_A 21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI--TEMQQVEAFLREGLLMRGLN-HPNVLALIGIMLPPEGL 97 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTC--CSHHHHHHHHHHHHHHHTCC-CTTBCCCCEEECCSSSC
T ss_pred eEEccCceeccCCCceEEEEEEecCCCceeeeeeeecccc--ccHHHHHHHHHHHHHHHhCC-CCCeeeEEEEEecCCCC
Confidence 457778999999999999999765544 7999998642 23345678899999999998 99999999999766554
Q ss_pred -EEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 144 -NLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 144 -~lv~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
++||||+.+++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++...
T Consensus 98 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili---~~~~~~kl~Dfg~~~~~ 174 (298)
T 3pls_A 98 PHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCML---DESFTVKVADFGLARDI 174 (298)
T ss_dssp CEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTCCEEECCTTSSCTT
T ss_pred cEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE---cCCCcEEeCcCCCcccc
Confidence 899999999999999976 4568999999999999999999999999999999999999 45678999999999865
Q ss_pred CCCC-----cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCC
Q 010013 222 KPGD-----VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWP 294 (520)
Q Consensus 222 ~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (520)
.... ......+++.|+|||.+.+ .++.++||||||+++|+|++ |.+||...........+........ ..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 251 (298)
T 3pls_A 175 LDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQ---PE 251 (298)
T ss_dssp TTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCCC---CT
T ss_pred cCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCCC---Cc
Confidence 4322 2234567889999999875 58899999999999999999 5555666666666666655543222 24
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 295 NISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 295 ~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.++..+.+++.+||+.||.+|||+.++++
T Consensus 252 ~~~~~l~~li~~~l~~~p~~Rps~~~ll~ 280 (298)
T 3pls_A 252 YCPDSLYQVMQQCWEADPAVRPTFRVLVG 280 (298)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cchHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 67899999999999999999999999976
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-43 Score=342.12 Aligned_cols=250 Identities=24% Similarity=0.358 Sum_probs=202.2
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEE----eC
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE----DR 140 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~----~~ 140 (520)
..++|.+.+.||+|+||.||+|.+..+++.||+|++... .....+.+.+|+.+++++. ||||+++++++. ..
T Consensus 27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~ 102 (317)
T 2buj_A 27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH---EQQDREEAQREADMHRLFN-HPNILRLVAYCLRERGAK 102 (317)
T ss_dssp TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHTCC-CTTBCCCCEEEEEEETTE
T ss_pred CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC---CHHHHHHHHHHHHHHhhcC-CCCeeeEEEEEEeccCCC
Confidence 347899999999999999999999999999999988542 3345678899999999998 999999999986 34
Q ss_pred CeEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecc
Q 010013 141 HSVNLIMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (520)
Q Consensus 141 ~~~~lv~e~~~g~~L~~~l~~----~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg 216 (520)
...++||||+.+++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||
T Consensus 103 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~---~~~~~~kl~dfg 179 (317)
T 2buj_A 103 HEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILL---GDEGQPVLMDLG 179 (317)
T ss_dssp EEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTSCEEECCCS
T ss_pred ceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---cCCCCEEEEecC
Confidence 578999999999999998876 4679999999999999999999999999999999999999 456789999999
Q ss_pred cccccCCCC----------cccccccCCCccCchhhcc----cCCCcchhHHHHHHHHHHhhCCCCCCCCCH--HHHHHH
Q 010013 217 LSVFFKPGD----------VFKDLVGSAYYVAPEVLRR----NYGAEADIWSAGVILYILLSGVPPFWGETE--QSIFDA 280 (520)
Q Consensus 217 ~a~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~--~~~~~~ 280 (520)
++....... ......||+.|+|||++.+ .++.++||||||+++|+|++|..||..... ......
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~ 259 (317)
T 2buj_A 180 SMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALA 259 (317)
T ss_dssp SCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHH
T ss_pred cchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHH
Confidence 987653211 0123457999999999853 268899999999999999999999953111 111222
Q ss_pred HHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 281 ILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
+.. ...++ ..+.++..+.++|.+||+.||++|||+.+++++
T Consensus 260 ~~~-~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 300 (317)
T 2buj_A 260 VQN-QLSIP--QSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ 300 (317)
T ss_dssp HHC-C--CC--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hhc-cCCCC--ccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence 222 22222 235789999999999999999999999999985
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-42 Score=337.88 Aligned_cols=249 Identities=24% Similarity=0.380 Sum_probs=202.7
Q ss_pred cccce-eecceeeccCCeEEEEEEE----cCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 010013 65 VRNTY-IFGRELGRGQFGVTYLVTH----KDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (520)
Q Consensus 65 ~~~~y-~~~~~lg~G~~g~Vy~~~~----~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~ 139 (520)
+.++| ++++.||+|+||.||++.. ..+++.||+|++... ......+.+.+|+.+++++. ||||+++++++.+
T Consensus 28 ~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~ 104 (318)
T 3lxp_A 28 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD--AGPQHRSGWKQEIDILRTLY-HEHIIKYKGCCED 104 (318)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT--CCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEE
T ss_pred ecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc--cChHHHHHHHHHHHHHHhCC-CcchhhEEEEEec
Confidence 44556 9999999999999988764 347889999998654 23345677999999999998 9999999999987
Q ss_pred --CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccc
Q 010013 140 --RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (520)
Q Consensus 140 --~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~ 217 (520)
...+++||||+++++|.+++... .+++..+..++.||+.||.|||+.||+||||||+||++ +.++.+||+|||+
T Consensus 105 ~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~---~~~~~~kl~Dfg~ 180 (318)
T 3lxp_A 105 AGAASLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLL---DNDRLVKIGDFGL 180 (318)
T ss_dssp TTTTEEEEEECCCTTCBHHHHGGGS-CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCGGG
T ss_pred CCCceEEEEEecccCCcHHHHHhhC-CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEE---cCCCCEEECCccc
Confidence 46889999999999999988664 59999999999999999999999999999999999999 4567899999999
Q ss_pred ccccCCCCc----ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHH---------------HH
Q 010013 218 SVFFKPGDV----FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQ---------------SI 277 (520)
Q Consensus 218 a~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~---------------~~ 277 (520)
+........ .....|++.|+|||++.+ .++.++||||||+++|+|++|..||...... ..
T Consensus 181 a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 260 (318)
T 3lxp_A 181 AKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRL 260 (318)
T ss_dssp CEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHH
T ss_pred cccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHH
Confidence 988754432 233467888999999865 5888999999999999999999998654321 11
Q ss_pred HHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 278 FDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
...+.... .. .....++..+.++|.+||+.||++|||+.++++
T Consensus 261 ~~~~~~~~-~~--~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 303 (318)
T 3lxp_A 261 TELLERGE-RL--PRPDKCPAEVYHLMKNCWETEASFRPTFENLIP 303 (318)
T ss_dssp HHHHHTTC-CC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhccc-CC--CCCccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 22222222 11 123578999999999999999999999999985
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-42 Score=352.28 Aligned_cols=254 Identities=24% Similarity=0.324 Sum_probs=209.0
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
.+.++|.+++.||+|+||.||+|.+..+++.||||++..... ...+.+|+.+++.+.+|++|+.+..++......
T Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~ 78 (483)
T 3sv0_A 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYN 78 (483)
T ss_dssp EETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS-----SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEE
T ss_pred CcCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEE
Confidence 356789999999999999999999999999999998764332 234778999999999668888888888889999
Q ss_pred EEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 144 NLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
++||||+ +++|.+++.. .+.+++..++.|+.||+.||.|||++||+||||||+|||++..+.++.+||+|||+++...
T Consensus 79 ~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (483)
T 3sv0_A 79 VLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR 157 (483)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred EEEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence 9999999 9999999975 5679999999999999999999999999999999999999654467789999999998765
Q ss_pred CCCc--------ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCH---HHHHHHHHcCCCCCC-
Q 010013 223 PGDV--------FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETE---QSIFDAILRGHIDFS- 289 (520)
Q Consensus 223 ~~~~--------~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~---~~~~~~~~~~~~~~~- 289 (520)
.... .....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+... ...+..+........
T Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (483)
T 3sv0_A 158 DTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSI 237 (483)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCH
T ss_pred CCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccH
Confidence 4321 125679999999999865 588999999999999999999999987543 333333322211111
Q ss_pred CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 290 SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 290 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
......++.++.++|..||..+|++||++.++++
T Consensus 238 ~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~ 271 (483)
T 3sv0_A 238 EALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR 271 (483)
T ss_dssp HHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 1111467899999999999999999999998875
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-43 Score=347.96 Aligned_cols=248 Identities=18% Similarity=0.248 Sum_probs=198.0
Q ss_pred ccccceeecceeeccCCeEEEEEE-----EcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccC--CCCeeEEEEE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVT-----HKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG--HRNIVELKGA 136 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~-----~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~--hp~iv~l~~~ 136 (520)
...++|.+.+.||+|+||.||+|. +..+++.||+|++... ....+.+|+.+++.+.. |+||++++++
T Consensus 62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~------~~~~~~~e~~~~~~l~~~~~~~iv~~~~~ 135 (365)
T 3e7e_A 62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA------NPWEFYIGTQLMERLKPSMQHMFMKFYSA 135 (365)
T ss_dssp CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC------CHHHHHHHHHHHHHSCGGGGGGBCCEEEE
T ss_pred ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC------ChhHHHHHHHHHHHhhhhhhhhhhhhhee
Confidence 345789999999999999999994 6677899999998643 23567788888888763 8999999999
Q ss_pred EEeCCeEEEEEeccCCCchHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeec--------
Q 010013 137 YEDRHSVNLIMDLCAGGELFDRIIA-----KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSS-------- 203 (520)
Q Consensus 137 ~~~~~~~~lv~e~~~g~~L~~~l~~-----~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~-------- 203 (520)
+...+..++||||++||+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus 136 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~ 215 (365)
T 3e7e_A 136 HLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDE 215 (365)
T ss_dssp EECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC---
T ss_pred eecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCcccc
Confidence 9999999999999999999999974 456999999999999999999999999999999999999964
Q ss_pred CCCCCCeeEeecccccccC---CCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHH
Q 010013 204 SAEDSPLKATDFGLSVFFK---PGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFD 279 (520)
Q Consensus 204 ~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~ 279 (520)
...++.+||+|||+++... ........+||+.|+|||++.+ .++.++|||||||++|+|++|+.||........
T Consensus 216 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-- 293 (365)
T 3e7e_A 216 DDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC-- 293 (365)
T ss_dssp ---CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE--
T ss_pred ccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce--
Confidence 1226789999999997543 3334456789999999999875 489999999999999999999999965432100
Q ss_pred HHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCC
Q 010013 280 AILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325 (520)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~ 325 (520)
.....+.. ...++.+.+++..||+.+|.+|++..+.|.+.
T Consensus 294 ---~~~~~~~~---~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~ 333 (365)
T 3e7e_A 294 ---KPEGLFRR---LPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQK 333 (365)
T ss_dssp ---EECSCCTT---CSSHHHHHHHHHHHHCCCCTTCCCCHHHHHHH
T ss_pred ---eechhccc---cCcHHHHHHHHHHHcCCCCCCcchHHHHHHHH
Confidence 00011111 12367899999999999999997666655543
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-42 Score=336.69 Aligned_cols=250 Identities=24% Similarity=0.373 Sum_probs=202.7
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEeccccc-CCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKL-INRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
.|..++.||+|+||.||+|.+ +++.+|+|++..... ......+.+.+|+.+++++. ||||+++++++.+.+..++|
T Consensus 32 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 108 (307)
T 2nru_A 32 ISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ-HENLVELLGFSSDGDDLCLV 108 (307)
T ss_dssp TTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSCEEE
T ss_pred ccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcC-CCCeEEEEEEEecCCceEEE
Confidence 355569999999999999987 578999999865432 22344678999999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 147 MDLCAGGELFDRIIA---KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~---~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
|||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||++ +.++.+||+|||++.....
T Consensus 109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~kl~Dfg~~~~~~~ 185 (307)
T 2nru_A 109 YVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILL---DEAFTAKISDFGLARASEK 185 (307)
T ss_dssp EECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---CTTCCEEECCCTTCEECCS
T ss_pred EEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEE---cCCCcEEEeeccccccccc
Confidence 999999999998864 3469999999999999999999999999999999999999 4567899999999987643
Q ss_pred CC---cccccccCCCccCchhhcccCCCcchhHHHHHHHHHHhhCCCCCCCCCHH----HHHHHHHcCCCCC-------C
Q 010013 224 GD---VFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQ----SIFDAILRGHIDF-------S 289 (520)
Q Consensus 224 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~----~~~~~~~~~~~~~-------~ 289 (520)
.. ......||+.|+|||++.+.++.++||||||+++|+|++|..||...... .....+......+ .
T Consensus 186 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (307)
T 2nru_A 186 FAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKM 265 (307)
T ss_dssp CSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSC
T ss_pred ccccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccc
Confidence 22 12345789999999999888899999999999999999999999765432 2222222211110 0
Q ss_pred CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 290 SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 290 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.......+..+.+++.+||+.||++|||+.++++
T Consensus 266 ~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~ 299 (307)
T 2nru_A 266 NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 299 (307)
T ss_dssp SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 1111234567899999999999999999999986
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-42 Score=335.47 Aligned_cols=247 Identities=23% Similarity=0.342 Sum_probs=194.8
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHh--ccCCCCeeEEEEEEEe--
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH--LTGHRNIVELKGAYED-- 139 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~--l~~hp~iv~l~~~~~~-- 139 (520)
.+.++|.+.+.||+|+||.||+|.+ +++.||||++... ....+.+|.+++.. +. ||||+++++++..
T Consensus 5 ~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~-h~niv~~~~~~~~~~ 75 (301)
T 3q4u_A 5 TVARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR------DEKSWFRETELYNTVMLR-HENILGFIASDMTSR 75 (301)
T ss_dssp CCGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG------GHHHHHHHHHHHHHTCCC-CTTBCCEEEEEEEEE
T ss_pred cccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc------cchhhHHHHHHHHHhhcc-CcCeeeEEEeecccc
Confidence 4568899999999999999999988 5789999998542 33556677777777 56 9999999998654
Q ss_pred --CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH--------HcCCeeecCCCCcEEeecCCCCCC
Q 010013 140 --RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCH--------SMGVMHRDLKPENFLFSSSAEDSP 209 (520)
Q Consensus 140 --~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH--------~~~ivH~Dlkp~NIll~~~~~~~~ 209 (520)
....++||||+++|+|.+++. ...+++..+..++.||+.||.||| +.||+||||||+|||++ .++.
T Consensus 76 ~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~---~~~~ 151 (301)
T 3q4u_A 76 HSSTQLWLITHYHEMGSLYDYLQ-LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVK---KNGQ 151 (301)
T ss_dssp TTEEEEEEEECCCTTCBHHHHHT-TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEEC---TTSC
T ss_pred CCCceeEEehhhccCCCHHHHHh-hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEc---CCCC
Confidence 356899999999999999884 457999999999999999999999 99999999999999994 5678
Q ss_pred eeEeecccccccCCCCc-----ccccccCCCccCchhhccc-------CCCcchhHHHHHHHHHHhhC----------CC
Q 010013 210 LKATDFGLSVFFKPGDV-----FKDLVGSAYYVAPEVLRRN-------YGAEADIWSAGVILYILLSG----------VP 267 (520)
Q Consensus 210 ~kl~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~-------~~~~~Dv~slG~~l~~ll~g----------~~ 267 (520)
+||+|||++........ .....||+.|+|||++.+. ++.++|||||||++|+|++| ..
T Consensus 152 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~ 231 (301)
T 3q4u_A 152 CCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKP 231 (301)
T ss_dssp EEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccc
Confidence 99999999976543322 1234799999999998653 34689999999999999999 88
Q ss_pred CCCCCC----HHHHHHHHHcCCCCCCCCC----CCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 268 PFWGET----EQSIFDAILRGHIDFSSDP----WPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 268 pf~~~~----~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
||.... ...............+..+ ...++..+.+++.+||+.||++|||+.++++
T Consensus 232 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~ 295 (301)
T 3q4u_A 232 PFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK 295 (301)
T ss_dssp TTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred cccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence 886532 1222222222111111111 0124578999999999999999999999986
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-42 Score=345.69 Aligned_cols=249 Identities=23% Similarity=0.334 Sum_probs=198.2
Q ss_pred cceeecceeeccCCeEEEEEEEcCCC---cEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEE-eCCe
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTK---QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYE-DRHS 142 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~---~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~-~~~~ 142 (520)
..|.+.+.||+|+||.||+|.+..++ ..+|+|.+... ......+.+.+|+.+++++. ||||+++++++. ..+.
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~~ 165 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGS 165 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC--SCSHHHHHHHHHHTTSTTCC-CTTBCCCCEEECCCSSC
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC--CCHHHHHHHHHHHHHHHhCC-CCCcceEEEEEEcCCCC
Confidence 45888999999999999999986432 46899988542 23445678999999999998 999999999865 4568
Q ss_pred EEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 143 VNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
.++||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++..
T Consensus 166 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~~~~kL~DFG~a~~~ 242 (373)
T 3c1x_A 166 PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDM 242 (373)
T ss_dssp CEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCC------
T ss_pred eEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEE---CCCCCEEEeeccccccc
Confidence 89999999999999999765 458999999999999999999999999999999999999 45678999999999865
Q ss_pred CCCC-----cccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCC
Q 010013 222 KPGD-----VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWP 294 (520)
Q Consensus 222 ~~~~-----~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (520)
.... ......+++.|+|||++. ..++.++|||||||++|+|++ |.+||.+....+....+..+..... ..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~---p~ 319 (373)
T 3c1x_A 243 YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ---PE 319 (373)
T ss_dssp ---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCC---CT
T ss_pred cccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCC---CC
Confidence 4322 112345778899999986 458999999999999999999 7888887766666666666543322 24
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 295 NISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 295 ~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
.++..+.+++.+||+.||++|||+.+++++
T Consensus 320 ~~~~~l~~li~~cl~~dp~~RPs~~ell~~ 349 (373)
T 3c1x_A 320 YCPDPLYEVMLKCWHPKAEMRPSFSELVSR 349 (373)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 678999999999999999999999999863
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-42 Score=342.96 Aligned_cols=245 Identities=16% Similarity=0.213 Sum_probs=200.6
Q ss_pred ccceeecceeeccCCeEEEEEEEcCC--------CcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeE-----
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDT--------KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE----- 132 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~--------~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~----- 132 (520)
.++|.+.+.||+|+||.||+|.+..+ ++.||+|++... +.+.+|+.+++++. ||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--------~~~~~E~~~l~~l~-h~niv~~~~~~ 111 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--------GRLFNEQNFFQRAA-KPLQVNKWKKL 111 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--------STHHHHHHHHHHHC-CHHHHHHHHHH
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--------chHHHHHHHHHHhc-ccchhhhhhhh
Confidence 47899999999999999999999874 789999998643 35779999999998 998887
Q ss_pred ----------EEEEEEe-CCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcE
Q 010013 133 ----------LKGAYED-RHSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENF 199 (520)
Q Consensus 133 ----------l~~~~~~-~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NI 199 (520)
+++++.. ....++||||+ +++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||
T Consensus 112 ~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NI 190 (352)
T 2jii_A 112 YSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENI 190 (352)
T ss_dssp TTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGE
T ss_pred ccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHE
Confidence 6777776 78899999999 99999999876 7899999999999999999999999999999999999
Q ss_pred EeecCCCCC--CeeEeecccccccCCCC--------cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCC
Q 010013 200 LFSSSAEDS--PLKATDFGLSVFFKPGD--------VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPP 268 (520)
Q Consensus 200 ll~~~~~~~--~~kl~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~p 268 (520)
|++. ++ .+||+|||++....... ......||+.|+|||++.+ .++.++|||||||++|+|++|..|
T Consensus 191 l~~~---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p 267 (352)
T 2jii_A 191 FVDP---EDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLP 267 (352)
T ss_dssp EEET---TEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCT
T ss_pred EEcC---CCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 9963 44 79999999998764321 1233579999999999875 588999999999999999999999
Q ss_pred CCCCC--HHHHHHHH---HcCCCCCC--CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 269 FWGET--EQSIFDAI---LRGHIDFS--SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 269 f~~~~--~~~~~~~~---~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
|.... ........ ......+. ...+..++..+.++|.+||..||++|||+.++++
T Consensus 268 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 329 (352)
T 2jii_A 268 WTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRN 329 (352)
T ss_dssp TGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred cccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHH
Confidence 98753 33332222 22222221 1123467999999999999999999999999976
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-42 Score=337.73 Aligned_cols=248 Identities=23% Similarity=0.379 Sum_probs=207.4
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
..++|.+.+.||+|+||.||+|.+.. .+|+|++..... .....+.+.+|+.+++++. ||||+++++++.+....+
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~ 105 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERD-NEDQLKAFKREVMAYRQTR-HENVVLFMGACMSPPHLA 105 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSC-CCCCCCCCCTTGGGGTTCC-CTTBCCCCEEEECSSCEE
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCC-CHHHHHHHHHHHHHHhcCC-CCCEeEEEEEEecCCceE
Confidence 45789999999999999999999864 489999865432 2334456778999999998 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 145 LIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
+||||++|++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+||+++ ++.+||+|||++.....
T Consensus 106 iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~----~~~~~l~Dfg~~~~~~~ 181 (319)
T 2y4i_B 106 IITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD----NGKVVITDFGLFSISGV 181 (319)
T ss_dssp EECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC------CCEECCCSCCC----
T ss_pred EEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe----CCCEEEeecCCcccccc
Confidence 9999999999999987754 699999999999999999999999999999999999994 45799999999876431
Q ss_pred ------CCcccccccCCCccCchhhcc----------cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCC
Q 010013 224 ------GDVFKDLVGSAYYVAPEVLRR----------NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID 287 (520)
Q Consensus 224 ------~~~~~~~~gt~~y~aPE~~~~----------~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~ 287 (520)
........|++.|+|||++.+ .++.++||||||+++|+|++|..||...........+..+...
T Consensus 182 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 261 (319)
T 2y4i_B 182 LQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKP 261 (319)
T ss_dssp ------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCC
T ss_pred ccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCC
Confidence 112234468999999998853 3678999999999999999999999998888877777665443
Q ss_pred CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 288 FSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 288 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
... ...++..+.+++.+||..||++|||+.++++
T Consensus 262 ~~~--~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~ 295 (319)
T 2y4i_B 262 NLS--QIGMGKEISDILLFCWAFEQEERPTFTKLMD 295 (319)
T ss_dssp CCC--CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred CCC--cCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 222 2367889999999999999999999999987
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-41 Score=330.40 Aligned_cols=240 Identities=29% Similarity=0.471 Sum_probs=193.4
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+.+.||+|+||.||+|.+. ++.||+|++... ...+.+.+|+.+++++. ||||+++++++. +..++|
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~--~~~~lv 77 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESE-----SERKAFIVELRQLSRVN-HPNIVKLYGACL--NPVCLV 77 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSST-----THHHHHHHHHHHHHHCC-CTTBCCEEEBCT--TTTEEE
T ss_pred hHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecCh-----hHHHHHHHHHHHHhcCC-CCCcCeEEEEEc--CCcEEE
Confidence 57999999999999999999885 678999998532 34577899999999998 999999999876 347899
Q ss_pred EeccCCCchHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---cCCeeecCCCCcEEeecCCCCCCeeEeecccccc
Q 010013 147 MDLCAGGELFDRIIAKG---HYSERAAANLCRQMVTVVHYCHS---MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~---~l~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 220 (520)
|||++|++|.+++.... .++...+..++.||+.||.|||+ +||+||||||+||+++. +...+||+|||++..
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~--~~~~~kl~Dfg~~~~ 155 (307)
T 2eva_A 78 MEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVA--GGTVLKICDFGTACD 155 (307)
T ss_dssp EECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEET--TTTEEEECCCCC---
T ss_pred EEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeC--CCCEEEEcccccccc
Confidence 99999999999998765 37899999999999999999999 89999999999999963 222489999999976
Q ss_pred cCCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCC--HHHHHHHHHcCCCCCCCCCCCCCC
Q 010013 221 FKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGET--EQSIFDAILRGHIDFSSDPWPNIS 297 (520)
Q Consensus 221 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 297 (520)
.... .....||+.|+|||++.+ .++.++||||||+++|+|++|..||.... .......+..+.. ......++
T Consensus 156 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 230 (307)
T 2eva_A 156 IQTH--MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTR---PPLIKNLP 230 (307)
T ss_dssp -----------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCC---CCCBTTCC
T ss_pred cccc--cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCC---CCcccccC
Confidence 5432 234568999999999875 58999999999999999999999997543 2333333333322 12235789
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 298 SSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 298 ~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
..+.+++.+||+.||++|||+.++++
T Consensus 231 ~~l~~li~~~l~~dp~~Rps~~ell~ 256 (307)
T 2eva_A 231 KPIESLMTRCWSKDPSQRPSMEEIVK 256 (307)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 99999999999999999999999986
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-41 Score=353.58 Aligned_cols=252 Identities=22% Similarity=0.373 Sum_probs=213.0
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
...++|.+.+.||+|+||.||+|.+.. +..||||++.... ...+.+.+|+.+|++++ ||||+++++++.+ +..
T Consensus 264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~-~~~ 336 (535)
T 2h8h_A 264 IPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT----MSPEAFLQEAQVMKKLR-HEKLVQLYAVVSE-EPI 336 (535)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTS----SCHHHHHHHHHHHHHCC-CTTBCCEEEEECS-SSC
T ss_pred cchhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCC----CCHHHHHHHHHHHHhCC-CCCEeeEEEEEee-ccc
Confidence 345789999999999999999999976 4679999986533 23467899999999998 9999999999876 678
Q ss_pred EEEEeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 144 NLIMDLCAGGELFDRIIA--KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~--~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
++||||+.+|+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++..
T Consensus 337 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~---~~~~~kl~DFG~a~~~ 413 (535)
T 2h8h_A 337 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLI 413 (535)
T ss_dssp EEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GGGCEEECCTTSTTTC
T ss_pred eEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEc---CCCcEEEcccccceec
Confidence 999999999999999964 35699999999999999999999999999999999999994 5678999999999876
Q ss_pred CCCC--cccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 010013 222 KPGD--VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (520)
Q Consensus 222 ~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (520)
.... ......++..|+|||++. +.++.++|||||||++|+|++ |..||.+....+....+..+.... ....++
T Consensus 414 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~---~~~~~~ 490 (535)
T 2h8h_A 414 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP---CPPECP 490 (535)
T ss_dssp CCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCCC---CCTTCC
T ss_pred CCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC---CCCCCC
Confidence 4321 112234677899999876 458999999999999999999 999999998888888877654321 224789
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHcC--Cccc
Q 010013 298 SSAKDIVKKMLHADPKERLSAAEVLNH--PWMR 328 (520)
Q Consensus 298 ~~~~~li~~~l~~dp~~Rps~~~~l~~--~~~~ 328 (520)
..+.+||.+||+.||++|||+.++++. .++.
T Consensus 491 ~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 523 (535)
T 2h8h_A 491 ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 523 (535)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence 999999999999999999999999863 4443
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-42 Score=328.98 Aligned_cols=228 Identities=15% Similarity=0.105 Sum_probs=187.8
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
.+.++|.+.+.||+|+||.||+|.+..+++.||+|++...........+.+.+|+.++.++. ||||+++++++...+..
T Consensus 28 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-hp~iv~~~~~~~~~~~~ 106 (286)
T 3uqc_A 28 IANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRID-KPGVARVLDVVHTRAGG 106 (286)
T ss_dssp ETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEEETTEE
T ss_pred EecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCC-CCCcceeeEEEEECCcE
Confidence 45578999999999999999999999999999999998665544555678999999999998 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
|+||||++|++|.+++.. + .....+..++.||+.||.|||++||+||||||+|||++ .++.+||+++|
T Consensus 107 ~lv~e~~~g~~L~~~l~~-~-~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~---~~g~~kl~~~~------- 174 (286)
T 3uqc_A 107 LVVAEWIRGGSLQEVADT-S-PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVS---IDGDVVLAYPA------- 174 (286)
T ss_dssp EEEEECCCEEEHHHHHTT-C-CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEE---TTSCEEECSCC-------
T ss_pred EEEEEecCCCCHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEc---CCCCEEEEecc-------
Confidence 999999999999998854 3 46667899999999999999999999999999999995 46678887443
Q ss_pred CCcccccccCCCccCchhhcccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHH---HHHcCCCCCCCCCCCCCCHHH
Q 010013 224 GDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFD---AILRGHIDFSSDPWPNISSSA 300 (520)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 300 (520)
|++| ++.++|||||||++|+|++|+.||.+........ ..............+.+++.+
T Consensus 175 ------------~~~~------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 236 (286)
T 3uqc_A 175 ------------TMPD------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQI 236 (286)
T ss_dssp ------------CCTT------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHH
T ss_pred ------------ccCC------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHH
Confidence 3333 5789999999999999999999998765422110 001111111111235789999
Q ss_pred HHHHHHhcccCCCCCCCHHHHHc
Q 010013 301 KDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 301 ~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.++|.+||+.||++| |+.++++
T Consensus 237 ~~li~~~l~~dP~~R-s~~el~~ 258 (286)
T 3uqc_A 237 SAVAARSVQGDGGIR-SASTLLN 258 (286)
T ss_dssp HHHHHHHHCTTSSCC-CHHHHHH
T ss_pred HHHHHHHcccCCccC-CHHHHHH
Confidence 999999999999999 9999987
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-41 Score=357.47 Aligned_cols=251 Identities=26% Similarity=0.368 Sum_probs=209.3
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCC---CcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDT---KQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~ 139 (520)
+...++|.+++.||+|+||.||+|.+..+ +..+|+|.+... ......+.+.+|+.+++++. ||||+++++++.
T Consensus 386 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~- 461 (656)
T 2j0j_A 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC--TSDSVREKFLQEALTMRQFD-HPHIVKLIGVIT- 461 (656)
T ss_dssp BCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST--TCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEC-
T ss_pred ccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc--CCHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEe-
Confidence 33457899999999999999999998653 457999987542 23344577899999999998 999999999985
Q ss_pred CCeEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccc
Q 010013 140 RHSVNLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218 (520)
Q Consensus 140 ~~~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a 218 (520)
.+..++||||+++|+|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++
T Consensus 462 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~---~~~~vkL~DFG~a 538 (656)
T 2j0j_A 462 ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKLGDFGLS 538 (656)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE---ETTEEEECCCCCC
T ss_pred cCceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEe---CCCCEEEEecCCC
Confidence 456899999999999999997654 699999999999999999999999999999999999996 4567999999999
Q ss_pred cccCCCCc--ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCC
Q 010013 219 VFFKPGDV--FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWP 294 (520)
Q Consensus 219 ~~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (520)
........ .....+++.|+|||++. ..++.++|||||||++|+|++ |..||.+....+....+..+.... ..+
T Consensus 539 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~---~~~ 615 (656)
T 2j0j_A 539 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP---MPP 615 (656)
T ss_dssp CSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCCC---CCT
T ss_pred eecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCC---CCc
Confidence 87654332 22345678999999986 458999999999999999997 999999998888888877664322 224
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 295 NISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 295 ~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.+++.+.++|.+||..||++|||+.++++
T Consensus 616 ~~~~~l~~li~~~l~~dP~~RPs~~el~~ 644 (656)
T 2j0j_A 616 NCPPTLYSLMTKCWAYDPSRRPRFTELKA 644 (656)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 78999999999999999999999999975
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-41 Score=330.42 Aligned_cols=249 Identities=22% Similarity=0.364 Sum_probs=202.7
Q ss_pred cccceeecceeeccCCeEEEEEE----EcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVT----HKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~----~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~ 140 (520)
..++|.+.+.||+|+||.||+|. +..+++.||+|++... .....+.+.+|+.++++++ ||||+++++++...
T Consensus 39 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~ 114 (326)
T 2w1i_A 39 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSA 114 (326)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC---CSHHHHHHHHHHHHHHTCC-CTTBCCEEEEECC-
T ss_pred CHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC---CHHHHHHHHHHHHHHHhCC-CCCeeeEEEEEEec
Confidence 34679999999999999999998 4567899999998643 3345678999999999998 99999999988654
Q ss_pred --CeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccc
Q 010013 141 --HSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (520)
Q Consensus 141 --~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~ 217 (520)
..+++||||+++++|.+++... ..+++..+..++.||+.||.|||+.||+||||||+||+++ .++.+||+|||+
T Consensus 115 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~---~~~~~kL~Dfg~ 191 (326)
T 2w1i_A 115 GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE---NENRVKIGDFGL 191 (326)
T ss_dssp ---CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEE---ETTEEEECCCTT
T ss_pred CCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEc---CCCcEEEecCcc
Confidence 3789999999999999999875 4599999999999999999999999999999999999995 456799999999
Q ss_pred ccccCCCCc----ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHH----------------H
Q 010013 218 SVFFKPGDV----FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQ----------------S 276 (520)
Q Consensus 218 a~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~----------------~ 276 (520)
+........ .....++..|+|||++.+ .++.++||||||+++|+|++|..||...... .
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (326)
T 2w1i_A 192 TKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 271 (326)
T ss_dssp CEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHH
T ss_pred hhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHH
Confidence 987654332 123456778999999864 4788999999999999999999998643111 1
Q ss_pred HHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
....+.... ..+ ....++..+.++|.+||..||++|||+.++++
T Consensus 272 ~~~~~~~~~-~~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~ 315 (326)
T 2w1i_A 272 LIELLKNNG-RLP--RPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 315 (326)
T ss_dssp HHHHHHTTC-CCC--CCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHhhcCC-CCC--CCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 112222221 111 23578999999999999999999999999975
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-41 Score=330.65 Aligned_cols=250 Identities=21% Similarity=0.330 Sum_probs=194.2
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhcc-CCCCeeEEEEEEEeC-
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT-GHRNIVELKGAYEDR- 140 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~-~hp~iv~l~~~~~~~- 140 (520)
..+.++|.+.+.||+|+||.||+|.+. ++.||||++... ......+|.+++..+. .||||+++++++...
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~ 104 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTT------EEASWFRETEIYQTVLMRHENILGFIAADIKGT 104 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGG------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEecc------ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCC
Confidence 456688999999999999999999885 789999998532 2244555666665541 499999999999887
Q ss_pred ---CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHc--------CCeeecCCCCcEEeecCCCCCC
Q 010013 141 ---HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM--------GVMHRDLKPENFLFSSSAEDSP 209 (520)
Q Consensus 141 ---~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~--------~ivH~Dlkp~NIll~~~~~~~~ 209 (520)
...++||||+++++|.+++... .+++..+..++.|++.||.|||++ ||+||||||+|||++ .++.
T Consensus 105 ~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~---~~~~ 180 (337)
T 3mdy_A 105 GSWTQLYLITDYHENGSLYDYLKST-TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVK---KNGT 180 (337)
T ss_dssp GGGCEEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEEC---TTSC
T ss_pred CCCCceEEEEeccCCCcHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEEC---CCCC
Confidence 7899999999999999998654 799999999999999999999998 999999999999994 5678
Q ss_pred eeEeecccccccCCCCc-----ccccccCCCccCchhhccc-CCCc------chhHHHHHHHHHHhhC----------CC
Q 010013 210 LKATDFGLSVFFKPGDV-----FKDLVGSAYYVAPEVLRRN-YGAE------ADIWSAGVILYILLSG----------VP 267 (520)
Q Consensus 210 ~kl~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~-~~~~------~Dv~slG~~l~~ll~g----------~~ 267 (520)
+||+|||++........ .....||+.|+|||++.+. .... +|||||||++|+|++| ..
T Consensus 181 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~ 260 (337)
T 3mdy_A 181 CCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQL 260 (337)
T ss_dssp EEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccc
Confidence 99999999977643321 1245799999999998654 3343 8999999999999999 77
Q ss_pred CCCCCC-----HHHHHHHHHcCCCCCCCCC---CCCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 268 PFWGET-----EQSIFDAILRGHIDFSSDP---WPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 268 pf~~~~-----~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
||.... .......+........... ...++..+.+++.+||+.||++|||+.++++|
T Consensus 261 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 325 (337)
T 3mdy_A 261 PYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT 325 (337)
T ss_dssp TTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred cHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence 775432 1222222222221111110 12456779999999999999999999999874
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-41 Score=332.22 Aligned_cols=249 Identities=22% Similarity=0.350 Sum_probs=201.5
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHh--ccCCCCeeEEEEEEEeC
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH--LTGHRNIVELKGAYEDR 140 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~--l~~hp~iv~l~~~~~~~ 140 (520)
..+.++|.+.+.||+|+||.||+|.+ +++.||||++... ....+.+|++++.. +. ||||+++++++...
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~-h~ni~~~~~~~~~~ 108 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR------EERSWFREAEIYQTVMLR-HENILGFIAADNKD 108 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG------GHHHHHHHHHHHHHSCCC-CTTBCCEEEEEECC
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch------hHHHHHHHHHHHHHhhcC-CCcEEEEEeeeccc
Confidence 44668899999999999999999998 4789999998532 34667889999988 55 99999999999877
Q ss_pred C----eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH--------HcCCeeecCCCCcEEeecCCCCC
Q 010013 141 H----SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCH--------SMGVMHRDLKPENFLFSSSAEDS 208 (520)
Q Consensus 141 ~----~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH--------~~~ivH~Dlkp~NIll~~~~~~~ 208 (520)
. ..++||||+++++|.+++.+ ..+++..++.++.||+.||.||| +.||+||||||+|||++ .++
T Consensus 109 ~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~---~~~ 184 (342)
T 1b6c_B 109 NGTWTQLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK---KNG 184 (342)
T ss_dssp CSSCCCEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEEC---TTS
T ss_pred CCccceeEEEEeecCCCcHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEEC---CCC
Confidence 6 89999999999999999866 46999999999999999999999 89999999999999994 567
Q ss_pred CeeEeecccccccCCCC-----cccccccCCCccCchhhccc-------CCCcchhHHHHHHHHHHhhC----------C
Q 010013 209 PLKATDFGLSVFFKPGD-----VFKDLVGSAYYVAPEVLRRN-------YGAEADIWSAGVILYILLSG----------V 266 (520)
Q Consensus 209 ~~kl~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~-------~~~~~Dv~slG~~l~~ll~g----------~ 266 (520)
.+||+|||++....... ......||+.|+|||++.+. ++.++|||||||++|+|++| .
T Consensus 185 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~ 264 (342)
T 1b6c_B 185 TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ 264 (342)
T ss_dssp CEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred CEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccc
Confidence 89999999998765433 12345799999999998653 22679999999999999999 7
Q ss_pred CCCCCCC-----HHHHHHHHHcCCCCCCCC-CC--CCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 267 PPFWGET-----EQSIFDAILRGHIDFSSD-PW--PNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 267 ~pf~~~~-----~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
.||.... .......+.......... .+ ..++..+.+++.+||+.||++|||+.++++|
T Consensus 265 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 330 (342)
T 1b6c_B 265 LPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT 330 (342)
T ss_dssp CTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred cCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence 8986642 334444443332221111 00 1234679999999999999999999999874
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-42 Score=339.53 Aligned_cols=251 Identities=16% Similarity=0.219 Sum_probs=199.0
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccC-----CcccHHHHHHHHHHHHhcc--------CCCCeeE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI-----NRDDVEDVRREVQIMHHLT--------GHRNIVE 132 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~--------~hp~iv~ 132 (520)
.++|.+++.||+|+||+||+|.+ +|+.||||++...... .....+.+.+|+.+++.+. .||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 46799999999999999999998 6799999999765321 2344578999999999996 5899988
Q ss_pred EEEEEE------------------------------eCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 010013 133 LKGAYE------------------------------DRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVH 182 (520)
Q Consensus 133 l~~~~~------------------------------~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~ 182 (520)
+.+++. ....+|+||||+++|++.+.+.+ +.+++..+..++.||+.||.
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TCCCHHHHHHHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-cCCCHHHHHHHHHHHHHHHH
Confidence 888753 26889999999999987777754 57899999999999999999
Q ss_pred HHH-HcCCeeecCCCCcEEeecCCC-----------------CCCeeEeecccccccCCCCcccccccCCCccCchhhcc
Q 010013 183 YCH-SMGVMHRDLKPENFLFSSSAE-----------------DSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR 244 (520)
Q Consensus 183 ~LH-~~~ivH~Dlkp~NIll~~~~~-----------------~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~ 244 (520)
||| ++||+||||||+|||++.++. ...+||+|||+|+..... ..+||+.|+|||++.+
T Consensus 176 ~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~----~~~gt~~y~aPE~~~g 251 (336)
T 2vuw_A 176 VAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG----IVVFCDVSMDEDLFTG 251 (336)
T ss_dssp HHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT----EEECCCCTTCSGGGCC
T ss_pred HHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC----cEEEeecccChhhhcC
Confidence 999 999999999999999975431 127999999999876532 3479999999999987
Q ss_pred cCCCcchhHHHHHH-HHHHhhCCCCCCCCCH-HHHHHHHHcC-CCC--CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHH
Q 010013 245 NYGAEADIWSAGVI-LYILLSGVPPFWGETE-QSIFDAILRG-HID--FSSDPWPNISSSAKDIVKKMLHADPKERLSAA 319 (520)
Q Consensus 245 ~~~~~~Dv~slG~~-l~~ll~g~~pf~~~~~-~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ 319 (520)
..+.++||||+|++ .+++++|..||..... ......+... ... .....++.+++++.+||.+||+.| |+.
T Consensus 252 ~~~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~ 326 (336)
T 2vuw_A 252 DGDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SAT 326 (336)
T ss_dssp CSSHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHH
T ss_pred CCccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHH
Confidence 77889999998777 7778889999844221 1122333321 111 111112357889999999999976 999
Q ss_pred HHH-cCCccc
Q 010013 320 EVL-NHPWMR 328 (520)
Q Consensus 320 ~~l-~~~~~~ 328 (520)
|+| +||||+
T Consensus 327 e~l~~Hp~f~ 336 (336)
T 2vuw_A 327 DLLCQHSLFK 336 (336)
T ss_dssp HHHHHCGGGC
T ss_pred HHHhcCCCcC
Confidence 999 999995
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-42 Score=346.10 Aligned_cols=247 Identities=16% Similarity=0.194 Sum_probs=191.6
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCC-CCe---------e-----
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH-RNI---------V----- 131 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~h-p~i---------v----- 131 (520)
..|.+++.||+|+||.||+|.+..+|+.||||++...........+.+.+|+.+++.+. | +|. +
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~-~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLR-GIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGST-TCCSHHHHHHHTCBCCCCEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhc-cCCCHHHHHHhcccccchhh
Confidence 45888999999999999999999999999999987544434445688999999999887 4 221 1
Q ss_pred -------EEEEEEEe-----CCeEEEEEeccCCCchHHHHHh-------cCCCCHHHHHHHHHHHHHHHHHHHHcCCeee
Q 010013 132 -------ELKGAYED-----RHSVNLIMDLCAGGELFDRIIA-------KGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192 (520)
Q Consensus 132 -------~l~~~~~~-----~~~~~lv~e~~~g~~L~~~l~~-------~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~ 192 (520)
.+..++.. ...++++|+++ +++|.+++.. .+.+++..+..++.||+.||.|||++||+||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHr 235 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHT 235 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 11111111 23467778776 6799887741 2347788999999999999999999999999
Q ss_pred cCCCCcEEeecCCCCCCeeEeecccccccCCCCcccccccCCCccCchhh----------cc-cCCCcchhHHHHHHHHH
Q 010013 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL----------RR-NYGAEADIWSAGVILYI 261 (520)
Q Consensus 193 Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~----------~~-~~~~~~Dv~slG~~l~~ 261 (520)
||||+|||++ .++.+||+|||+++..... ....+| +.|+|||++ .. .++.++|||||||++|+
T Consensus 236 DiKp~NILl~---~~~~~kL~DFG~a~~~~~~--~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~e 309 (413)
T 3dzo_A 236 YLRPVDIVLD---QRGGVFLTGFEHLVRDGAS--AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYW 309 (413)
T ss_dssp CCCGGGEEEC---TTCCEEECCGGGCEETTEE--ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHH
T ss_pred CcccceEEEe---cCCeEEEEeccceeecCCc--cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHH
Confidence 9999999994 5667999999998875432 455678 999999988 32 36779999999999999
Q ss_pred HhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcccc
Q 010013 262 LLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 262 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
|++|+.||...........+. ..+..+|+.+.+||.+||..||++|||+.++|+||||+.
T Consensus 310 lltg~~Pf~~~~~~~~~~~~~--------~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~ 369 (413)
T 3dzo_A 310 IWCADLPNTDDAALGGSEWIF--------RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ 369 (413)
T ss_dssp HHHSSCCCCTTGGGSCSGGGG--------SSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred HHHCCCCCCCcchhhhHHHHH--------hhcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHH
Confidence 999999998765433222221 123467899999999999999999999999999999963
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-41 Score=362.33 Aligned_cols=246 Identities=22% Similarity=0.335 Sum_probs=203.4
Q ss_pred cccccccceeecceeeccCCeEEEEEEEcC-CCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 010013 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKD-TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (520)
Q Consensus 61 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~ 139 (520)
..+.+.++|.+.+.||+|+||.||+|.+.. +++.||||++.... .....+.+.+|+.+++++. ||||+++++++..
T Consensus 74 ~g~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~ 150 (681)
T 2pzi_A 74 PGDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG--DAEAQAMAMAERQFLAEVV-HPSIVQIFNFVEH 150 (681)
T ss_dssp TTCEETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC--CHHHHHHHHHHHGGGGGCC-CTTBCCEEEEEEE
T ss_pred CCCEeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC--CHHHHHHHHHHHHHHHhcC-CCCcCeEeeeEee
Confidence 345567899999999999999999999976 78999999886432 3344567889999999998 9999999999987
Q ss_pred CCe-----EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEee
Q 010013 140 RHS-----VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATD 214 (520)
Q Consensus 140 ~~~-----~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~D 214 (520)
.+. .|+||||++|++|.+.+.. .+++..+..++.||+.||.|||++||+||||||+|||++. +.+||+|
T Consensus 151 ~~~~~~~~~~lv~E~~~g~~L~~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~----~~~kl~D 224 (681)
T 2pzi_A 151 TDRHGDPVGYIVMEYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTE----EQLKLID 224 (681)
T ss_dssp ECTTSCEEEEEEEECCCCEECC----C--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECS----SCEEECC
T ss_pred cCCCCCceeEEEEEeCCCCcHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeC----CcEEEEe
Confidence 655 7999999999999887654 7999999999999999999999999999999999999953 3799999
Q ss_pred cccccccCCCCcccccccCCCccCchhhcccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCC
Q 010013 215 FGLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP 294 (520)
Q Consensus 215 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (520)
||++...... ....||+.|+|||++.+.++.++|||||||++|+|++|..||.+.... ... ......
T Consensus 225 FG~a~~~~~~---~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~---------~~~-~~~~~~ 291 (681)
T 2pzi_A 225 LGAVSRINSF---GYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVD---------GLP-EDDPVL 291 (681)
T ss_dssp CTTCEETTCC---SCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETTEECS---------SCC-TTCHHH
T ss_pred cccchhcccC---CccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCcccccc---------ccc-cccccc
Confidence 9999876543 456799999999999877789999999999999999999988652110 000 011111
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccc
Q 010013 295 NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (520)
Q Consensus 295 ~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~ 328 (520)
.+++.+.++|.+||+.||++||+..+++.|+|+.
T Consensus 292 ~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 292 KTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp HHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred ccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 3467899999999999999999999999888874
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-41 Score=333.18 Aligned_cols=245 Identities=22% Similarity=0.336 Sum_probs=185.0
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHH--HHhccCCCCeeEEEEEEEe----
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI--MHHLTGHRNIVELKGAYED---- 139 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~--l~~l~~hp~iv~l~~~~~~---- 139 (520)
.++|.+++.||+|+||.||+|.+ +++.||||++.... ...+..|..+ +..+. ||||+++++.+..
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~------~~~~~~e~~~~~~~~~~-h~~i~~~~~~~~~~~~~ 82 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFAN------RQNFINEKNIYRVPLME-HDNIARFIVGDERVTAD 82 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGG------HHHHHHHHHHHTSTTCC-CTTBCCEEEEEEEECTT
T ss_pred hHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccc------hhhHHHHHHHHHHHhcc-CcchhhheecccccccC
Confidence 46799999999999999999977 57899999985432 2344444444 34466 9999999986542
Q ss_pred -CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHc---------CCeeecCCCCcEEeecCCCCCC
Q 010013 140 -RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM---------GVMHRDLKPENFLFSSSAEDSP 209 (520)
Q Consensus 140 -~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~---------~ivH~Dlkp~NIll~~~~~~~~ 209 (520)
...+++||||+++|+|.+++... ..++..+..++.||+.||.|||+. ||+||||||+|||++ .++.
T Consensus 83 ~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~---~~~~ 158 (336)
T 3g2f_A 83 GRMEYLLVMEYYPNGSLXKYLSLH-TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVK---NDGT 158 (336)
T ss_dssp SCEEEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEEC---TTSC
T ss_pred CCceEEEEEecCCCCcHHHHHhhc-ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEc---CCCc
Confidence 33678999999999999988665 458999999999999999999999 999999999999994 5678
Q ss_pred eeEeecccccccCCCC---------cccccccCCCccCchhhcc--------cCCCcchhHHHHHHHHHHhhCCCCCCCC
Q 010013 210 LKATDFGLSVFFKPGD---------VFKDLVGSAYYVAPEVLRR--------NYGAEADIWSAGVILYILLSGVPPFWGE 272 (520)
Q Consensus 210 ~kl~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~--------~~~~~~Dv~slG~~l~~ll~g~~pf~~~ 272 (520)
+||+|||++....... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||...
T Consensus 159 ~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~ 238 (336)
T 3g2f_A 159 CVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPG 238 (336)
T ss_dssp EEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTT
T ss_pred EEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCc
Confidence 9999999998764321 1224579999999999864 3567899999999999999997765332
Q ss_pred CH------------------HHHHHHHHcCCCCCC-CCCC---CCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 273 TE------------------QSIFDAILRGHIDFS-SDPW---PNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 273 ~~------------------~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.. ......+........ ...+ ..+++.+.+||.+||..||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~ 311 (336)
T 3g2f_A 239 ESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEE 311 (336)
T ss_dssp SCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred cchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHH
Confidence 11 111111111111111 1111 124457999999999999999999999954
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=303.16 Aligned_cols=232 Identities=14% Similarity=0.107 Sum_probs=158.9
Q ss_pred ceeeccCCeEEEEEEEcCCCcEEEEEEecccccCC-------cccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN-------RDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-------~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
...+.|+.|.+..++..-.|+.+++|++.+..... ....+.+.+|+++|+++..|+||+++++++++++..||
T Consensus 240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yL 319 (569)
T 4azs_A 240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWL 319 (569)
T ss_dssp CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEE
T ss_pred hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEE
Confidence 45778888888888888889999999997653221 12346799999999999889999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC-
Q 010013 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG- 224 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~- 224 (520)
||||++|++|.+++.+.++++.. +|+.||+.||.|+|++|||||||||+|||+ +.++.+||+|||+|+.....
T Consensus 320 VMEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL---~~dg~vKL~DFGlAr~~~~~~ 393 (569)
T 4azs_A 320 VMEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMV---DARQHARLIDFGSIVTTPQDC 393 (569)
T ss_dssp EEECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEE---CTTSCEEECCCTTEESCC---
T ss_pred EEecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEE---CCCCCEEEeecccCeeCCCCC
Confidence 99999999999999998888865 478999999999999999999999999999 45778999999999876533
Q ss_pred CcccccccCCCccCchhhcccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Q 010013 225 DVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (520)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (520)
......+||+.|+|||++.+.+..++|+||+|++++.+.++..++ ...+... . .. ...+..+.
T Consensus 394 ~~~~t~vGTp~YmAPE~l~g~~~~~~d~~s~g~~~~~l~~~~~~~--------~~~l~~~-~---~~-----~~~~~~l~ 456 (569)
T 4azs_A 394 SWPTNLVQSFFVFVNELFAENKSWNGFWRSAPVHPFNLPQPWSNW--------LYAVWQE-P---VE-----RWNFVLLL 456 (569)
T ss_dssp CCSHHHHHHHHHHHHHHC-----------------CCCCTTHHHH--------HHHHHTS-C---GG-----GCSHHHHH
T ss_pred ccccCceechhhccHHHhCCCCCCcccccccccchhhhccccchh--------HHHhhcC-C---CC-----CCcHHHHH
Confidence 234557899999999999988888999999999988877654432 1111111 1 00 11245666
Q ss_pred HHhcccCCCCCCCHHHHHcCCcc
Q 010013 305 KKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 305 ~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
..+...+|..||.......++|.
T Consensus 457 ~~l~~~~~~~~~~~~~~~~~~~~ 479 (569)
T 4azs_A 457 ALFEKKAKLPSAEQQRGATEQWI 479 (569)
T ss_dssp HHHHTGGGSCCGGGSSCCHHHHH
T ss_pred HHHhCCCCCCCCChhhhccchhH
Confidence 66777777777766655555554
|
| >3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.2e-28 Score=220.86 Aligned_cols=186 Identities=32% Similarity=0.549 Sum_probs=151.3
Q ss_pred cCCccccCCCCCCCcccHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhc
Q 010013 323 NHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL 402 (520)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~ 402 (520)
.|||...... ...++...++.++++|...+.+++.++..++..++++++.++.++|+.+|.|++|.|+.+||..++..+
T Consensus 8 ~~~~~~~~~~-~~~~l~~~~~~~l~~f~~~~~lk~~~l~~i~~~l~~~e~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~ 86 (197)
T 3pm8_A 8 SSGRENLYFQ-GHVELSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKI 86 (197)
T ss_dssp ---------C-CSCCCCTTHHHHHHHTTTSCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred cchHhhhccC-CCCCCCHHHHHHHHHHHHccHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHh
Confidence 5899987664 355677778999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhc--CCC-CH
Q 010013 403 GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY--NMG-DA 479 (520)
Q Consensus 403 ~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~--~~~-~~ 479 (520)
+..++..++..+|..+|.|++|.|+|+||+.++.........+.++.+|+.||.|++|+|+.+||+.++..+ +.. ++
T Consensus 87 g~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~~~~ 166 (197)
T 3pm8_A 87 GYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLID 166 (197)
T ss_dssp C----CHHHHHHHHC-------CEEHHHHHHTTCCHHHHCSHHHHHHHHHHHCTTCSSEECHHHHHHHHC----CCHHHH
T ss_pred CCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCCH
Confidence 988999999999999999999999999999987766556677899999999999999999999999999988 555 77
Q ss_pred HHHHHHHHHhcCCCCcceeHHHHHHHHHcC
Q 010013 480 KTIKEIIAEVDIDNDGRINYEEFAAMMRKG 509 (520)
Q Consensus 480 ~~~~~~~~~~d~~~dg~i~~~ef~~~l~~~ 509 (520)
++++++|..+|.|+||.|+|+||+.+|+++
T Consensus 167 ~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~ 196 (197)
T 3pm8_A 167 KAIDSLLQEVDLNGDGEIDFHEFMLMMSKK 196 (197)
T ss_dssp HHHHHHHHHHCTTCSSSEEHHHHHHHHHCC
T ss_pred HHHHHHHHHHcCCCCCcCcHHHHHHHHHcC
Confidence 889999999999999999999999999863
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.6e-28 Score=251.61 Aligned_cols=184 Identities=18% Similarity=0.173 Sum_probs=142.3
Q ss_pred eecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcc-----cHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 70 IFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRD-----DVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 70 ~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~-----~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
...+.||+|+||.||+|.. .+..+++|+.......... ..+.+.+|+.++++++ ||||+++..++...+..|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~~~~~~~~~~~~~ 415 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY--LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVK-DFGIPAPYIFDVDLDNKR 415 (540)
T ss_dssp ---------CCEEEEEEEC--SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGG-GGTCCCCCEEEEETTTTE
T ss_pred CCCCEEeeCCCEEEEEEEE--CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcC-CCCcCceEEEEEeCCccE
Confidence 4467899999999999944 4678999987553332221 2355899999999998 999995555555677789
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
+||||++|++|.+++.. +..++.||+.||.|||++||+||||||+|||++ . .+||+|||+++.....
T Consensus 416 lVmE~~~ggsL~~~l~~--------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~---~--~~kL~DFGla~~~~~~ 482 (540)
T 3en9_A 416 IMMSYINGKLAKDVIED--------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFD---K--DLYIIDFGLGKISNLD 482 (540)
T ss_dssp EEEECCCSEEHHHHSTT--------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEES---S--SEEECCCTTCEECCCH
T ss_pred EEEECCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEEC---C--eEEEEECccCEECCCc
Confidence 99999999999998865 668999999999999999999999999999995 2 8999999999987543
Q ss_pred Cc--------ccccccCCCccCchhhcc---cCCCcchhHHHHHHHHHHhhCCCCC
Q 010013 225 DV--------FKDLVGSAYYVAPEVLRR---NYGAEADIWSAGVILYILLSGVPPF 269 (520)
Q Consensus 225 ~~--------~~~~~gt~~y~aPE~~~~---~~~~~~Dv~slG~~l~~ll~g~~pf 269 (520)
.. .....||+.|+|||++.. .|+..+|+|+..+-..+-+.++.+|
T Consensus 483 ~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 483 EDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred cccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 21 135679999999999864 4778889999998888877766665
|
| >3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-26 Score=208.27 Aligned_cols=182 Identities=35% Similarity=0.545 Sum_probs=155.5
Q ss_pred cCCccccCCCCCCCcccHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhc
Q 010013 323 NHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL 402 (520)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~ 402 (520)
.|||+.... ....++...++.++++|...+.+++.++..++..++++++.++.++|..+|.|++|.|+.+||..++..+
T Consensus 3 ~~~~~~~~~-~~~~~l~~~~~~~l~~~~~~~~l~~~~l~~~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~ 81 (191)
T 3k21_A 3 HHHHHSSGR-ENLYFQGIHVLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKD 81 (191)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHT
T ss_pred CCccccCCc-cccccccHHHHHHHHHHHhhHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHc
Confidence 477775432 2345677889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhc--CCC-CH
Q 010013 403 GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY--NMG-DA 479 (520)
Q Consensus 403 ~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~--~~~-~~ 479 (520)
|...+ .++..+|..+|.|++|.|+|+||+.++.... ....+.++.+|+.+|.|++|+|+.+||+.++... +.. ++
T Consensus 82 g~~~~-~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~-~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~l~~ 159 (191)
T 3k21_A 82 GLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDRK-QLSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQ 159 (191)
T ss_dssp TCCCC-TTHHHHHHHHCTTCSSSEEHHHHHHHHSCGG-GCCHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHSSSCSCCCH
T ss_pred CCCcH-HHHHHHHHHhCCCCCCeEeHHHHHHHHHhhh-hccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhcCCCCCCCH
Confidence 98888 8999999999999999999999999875443 3556789999999999999999999999999884 333 43
Q ss_pred ---HHHHHHHHHhcCCCCcceeHHHHHHHHH
Q 010013 480 ---KTIKEIIAEVDIDNDGRINYEEFAAMMR 507 (520)
Q Consensus 480 ---~~~~~~~~~~d~~~dg~i~~~ef~~~l~ 507 (520)
+++.++|..+|.|+||.|+|+||+.+|+
T Consensus 160 ~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~ 190 (191)
T 3k21_A 160 RDVNRVKRMIRDVDKNNDGKIDFHEFSEMMK 190 (191)
T ss_dssp HHHHHHHHHHHHHCSSSSSSBCHHHHHHHHC
T ss_pred hHHHHHHHHHHHhcCCCCCeECHHHHHHHHc
Confidence 4689999999999999999999999885
|
| >2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.93 E-value=6.7e-26 Score=200.18 Aligned_cols=145 Identities=38% Similarity=0.631 Sum_probs=135.0
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc-chhhh
Q 010013 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM-NRVER 443 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~-~~~~~ 443 (520)
..|+++++++++++|..+|.|++|.|+.+||..++..+|..+++.++..++..+|.+++|.|+|.||+.++... .....
T Consensus 3 ~~Lt~eqi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~~~ 82 (176)
T 2lhi_A 3 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDS 82 (176)
T ss_dssp CCCCTTGGGHHHHHHHTTCSSCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSSHH
T ss_pred CcCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhcccCCc
Confidence 56899999999999999999999999999999999999999999999999999999999999999999977643 33456
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHcCC
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGN 510 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~~~ 510 (520)
.+.++.+|+.||.|++|+|+.+||+.+|..++.. ++++++++|..+| |+||.|+|+||+++|+++.
T Consensus 83 ~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~d-d~dG~I~~~EF~~~m~k~~ 149 (176)
T 2lhi_A 83 EQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALLSKGS 149 (176)
T ss_dssp HHHHHHHHHHHCSSCSSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHH-TTSSCBCTTHHHHHHTCCS
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCcccchHHHHHHHHhhc-CCCCeEeHHHHHHHHHhcC
Confidence 7789999999999999999999999999999988 8999999999999 9999999999999998754
|
| >2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-25 Score=192.94 Aligned_cols=143 Identities=34% Similarity=0.605 Sum_probs=133.6
Q ss_pred hhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhc-cchhhhH
Q 010013 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH-MNRVERE 444 (520)
Q Consensus 366 ~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~-~~~~~~~ 444 (520)
.+|++++++++++|..+|.|++|.|+.+||..++..++..++.+++..++..+|.+++|.|+|.||+..+.. .......
T Consensus 3 ~lt~eqi~el~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~ 82 (148)
T 2lmt_A 3 ELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTE 82 (148)
T ss_dssp SCCSHHHHHHHHHHHHHHCSSCCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTTTH
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcccCcH
Confidence 478999999999999999999999999999999999999999999999999999999999999999987654 3344567
Q ss_pred HHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 445 EHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 445 ~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
+.++.+|+.||.|++|+|+.+||+.++..+|.. +.++++++|..+|.|+||.|+|+||+++|.+
T Consensus 83 ~~l~~aF~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~m~~ 147 (148)
T 2lmt_A 83 EEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFVWMISQ 147 (148)
T ss_dssp HHHHHHHHHHHSSCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSCCSSEEHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCCcCcCcHHHHHHHHHHcCccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence 789999999999999999999999999999988 8999999999999999999999999999975
|
| >2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A | Back alignment and structure |
|---|
Probab=99.92 E-value=8.1e-25 Score=186.75 Aligned_cols=140 Identities=29% Similarity=0.589 Sum_probs=128.3
Q ss_pred hHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc-chhhhHHH
Q 010013 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM-NRVEREEH 446 (520)
Q Consensus 368 ~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~-~~~~~~~~ 446 (520)
+++++.++.++|..+|.|++|.|+.+||..++..+|..++.+++..++..+|.|++|.|+|+||+.++... ........
T Consensus 1 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~ 80 (143)
T 2obh_A 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEE 80 (143)
T ss_dssp CHHHHHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHHHHhccccHHHH
Confidence 35678899999999999999999999999999999999999999999999999999999999999887543 22334578
Q ss_pred HHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHH
Q 010013 447 LYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507 (520)
Q Consensus 447 ~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~ 507 (520)
++.+|+.||.|++|+|+.+||+.++..+|.. +++++.++|..+|.|+||.|+|+||+.+|.
T Consensus 81 l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~eF~~~~~ 142 (143)
T 2obh_A 81 ILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMK 142 (143)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHC
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 9999999999999999999999999999987 889999999999999999999999999885
|
| >3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.4e-25 Score=212.77 Aligned_cols=144 Identities=40% Similarity=0.697 Sum_probs=131.9
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc-chhhh
Q 010013 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM-NRVER 443 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~-~~~~~ 443 (520)
.+++++++++|+++|+.+|.|++|+|+.+||..+|+.+|..+++++++.+|..+|.|++|.|+|+||+.++... .....
T Consensus 294 E~Lt~EEI~ELREaF~~fDkDgdG~IS~eELk~aLrsLG~~~TeeEI~~Lf~~~D~DgDG~IdFeEFl~lms~~lk~~d~ 373 (440)
T 3u0k_A 294 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDTDS 373 (440)
T ss_dssp BCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHTC------
T ss_pred hhhhHHHHHHHHHHHHHHcCCCCCEECHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCh
Confidence 57899999999999999999999999999999999999999999999999999999999999999999987643 33445
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.+.++.+|+.||.|++|+|+.+||+.+|..+|.. ++++++++|+.+|.|+||.|+|+||+++|..
T Consensus 374 eeeLreAFk~fDkDgdG~IS~eELr~vL~~lGe~LSdeEIdeLfke~D~DgDGkIsyeEFvkmMtS 439 (440)
T 3u0k_A 374 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 439 (440)
T ss_dssp CHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHC-
T ss_pred HHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHhCC
Confidence 6789999999999999999999999999999988 8999999999999999999999999999864
|
| >3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.92 E-value=4e-25 Score=198.49 Aligned_cols=170 Identities=35% Similarity=0.563 Sum_probs=155.8
Q ss_pred cccHHHHHHHHHHHhhhHHHHHHHHHHHhhh-hHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhc-----------CC
Q 010013 337 PLDIAVLTRMKQFRAMNKLKKVALKVIAENL-SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL-----------GT 404 (520)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~-~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~-----------~~ 404 (520)
++...++.++++|+..+.+++.++..++..+ +++++.++.++|..+|.|++|.|+.+||..++..+ +.
T Consensus 3 ~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~ 82 (191)
T 3khe_A 3 HALTGALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDS 82 (191)
T ss_dssp CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHSSCTTTTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccc
Confidence 3456678999999999999999999999888 88999999999999999999999999999999887 66
Q ss_pred CCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHH
Q 010013 405 RLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIK 483 (520)
Q Consensus 405 ~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~ 483 (520)
.++..++..+|..+|.|++|.|+|+||+.++.........+.++.+|+.+|.|++|+|+.+||+.++. +.. +++++.
T Consensus 83 ~~~~~~~~~~~~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~--~~~~~~~~~~ 160 (191)
T 3khe_A 83 SQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFG--VTEVDDETWH 160 (191)
T ss_dssp HHHHHHHHHHHHHTCTTCSSSEEHHHHHHHHSCHHHHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTT--SSCCCHHHHH
T ss_pred hhhHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhcccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHc--cCCCCHHHHH
Confidence 67788899999999999999999999999887665566678899999999999999999999999998 555 888999
Q ss_pred HHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 484 EIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 484 ~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.+|..+|.|+||.|+|+||+.+|..
T Consensus 161 ~~~~~~D~~~dg~i~~~eF~~~~~~ 185 (191)
T 3khe_A 161 QVLQECDKNNDGEVDFEEFVEMMQK 185 (191)
T ss_dssp HHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999976
|
| >3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.5e-24 Score=190.42 Aligned_cols=165 Identities=24% Similarity=0.489 Sum_probs=146.8
Q ss_pred cHHHHHHHHHHHhhhHHHHHHHHHHHhhhh--HHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHH
Q 010013 339 DIAVLTRMKQFRAMNKLKKVALKVIAENLS--EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLME 416 (520)
Q Consensus 339 ~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~--~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~ 416 (520)
...++.++++|...+.+++.++..+...++ ++++.++.++|..+|.|++|.|+.+||..++..+|.. ..++..+|.
T Consensus 3 ~~~~~~~l~~~~~~~~l~~~~l~~~~~~l~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~--~~~~~~~~~ 80 (180)
T 3mse_B 3 SPNVLNNMKSYMKHSNIRNIIINIMAHELSVINNHIKYINELFYKLDTNHNGSLSHREIYTVLASVGIK--KWDINRILQ 80 (180)
T ss_dssp CHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCC--HHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhHHHHHHHHHHHHHccCCHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCC--HHHHHHHHH
Confidence 356788999999999999999999999987 8999999999999999999999999999999999854 688999999
Q ss_pred HhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCC-
Q 010013 417 AADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDND- 494 (520)
Q Consensus 417 ~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~d- 494 (520)
.+|.|++|.|+|+||+.++..... ...+.++.+|+.+|.|++|+|+.+||+.++. +.. +++++.++|..+|.|+|
T Consensus 81 ~~D~d~~g~i~~~Ef~~~~~~~~~-~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~--~~~~~~~~~~~~~~~~d~~~d~ 157 (180)
T 3mse_B 81 ALDINDRGNITYTEFMAGCYRWKN-IESTFLKAAFNKIDKDEDGYISKSDIVSLVH--DKVLDNNDIDNFFLSVHSIKKG 157 (180)
T ss_dssp HHCTTCCSEECHHHHHHHHSCCTT-C--CHHHHHHHHHCTTCSSCBCHHHHHHHTT--TSSCCHHHHHHHHHHHHTC---
T ss_pred HhCCCCCCcCcHHHHHHHHHhccc-CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHc--CCCCCHHHHHHHHHHhhhccCc
Confidence 999999999999999998765433 2346799999999999999999999999998 444 78899999999999998
Q ss_pred -------cceeHHHHHHHHHc
Q 010013 495 -------GRINYEEFAAMMRK 508 (520)
Q Consensus 495 -------g~i~~~ef~~~l~~ 508 (520)
|.|+|+||+.+|..
T Consensus 158 ~~~~~~~G~i~~~eF~~~l~~ 178 (180)
T 3mse_B 158 IPREHIINKISFQEFKDYMLS 178 (180)
T ss_dssp ------CCCBCHHHHHHHHHT
T ss_pred ccccccCCeeeHHHHHHHHHh
Confidence 99999999999875
|
| >3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C | Back alignment and structure |
|---|
Probab=99.91 E-value=8.7e-25 Score=189.49 Aligned_cols=143 Identities=24% Similarity=0.390 Sum_probs=128.6
Q ss_pred hhhHHHHhhHHHHhcccCC--CCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccc---h
Q 010013 366 NLSEEEIMGLKEMFKSMDT--DNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN---R 440 (520)
Q Consensus 366 ~~~~~~~~~l~~~F~~~D~--~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~---~ 440 (520)
+|+++++++++++|..||. |++|+|+..||..+|+.+|.++++++++.++. .|.+++|.|+|+||+.++.... .
T Consensus 2 qLt~eqi~elre~F~~fD~~~d~dG~I~~~El~~~lr~lG~~~t~~el~~~~~-~d~~~~g~i~f~eFl~~~~~~~~~~~ 80 (159)
T 3i5g_C 2 QLTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGG-TKKMGEKAYKLEEILPIYEEMSSKDT 80 (159)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTSSSCEEGGGHHHHHHHTTCCCCHHHHHTTTC-CSSTTSCEECHHHHHHHHHHHTTCCT
T ss_pred CCCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHc-ccccCCCcccHHHHHHHHHHhhcccc
Confidence 5889999999999999995 89999999999999999999999999998764 4778899999999999876432 2
Q ss_pred hhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcC--CCCcceeHHHHHHHHHcC
Q 010013 441 VEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDI--DNDGRINYEEFAAMMRKG 509 (520)
Q Consensus 441 ~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~--~~dg~i~~~ef~~~l~~~ 509 (520)
....+.++.+|+.||+|++|+|+.+||+.+|..+|.. ++++++++++.+|. |+||.|+|+||+++|..+
T Consensus 81 ~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~D~~~d~dG~I~~~EF~~~m~~~ 152 (159)
T 3i5g_C 81 GTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVMAG 152 (159)
T ss_dssp TCCHHHHHHHHHHHCTTSSSEECHHHHHHHHHHSSSCCCHHHHHHHHHHTTCCCCSSCCEEHHHHHHHHHHC
T ss_pred cchHHHHHHHHHHHhcCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCCCeEeHHHHHHHHHCC
Confidence 3456789999999999999999999999999999998 99999999999995 889999999999988763
|
| >1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... | Back alignment and structure |
|---|
Probab=99.91 E-value=5.6e-24 Score=182.65 Aligned_cols=144 Identities=41% Similarity=0.686 Sum_probs=132.1
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc-chhhh
Q 010013 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM-NRVER 443 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~-~~~~~ 443 (520)
..+++++++++.++|..+|.|++|.|+.+||..++..+|..++..++..+|..+|.|++|.|+|+||+.++... .....
T Consensus 2 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~ 81 (148)
T 1exr_A 2 EQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDS 81 (148)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhcccCCCc
Confidence 35778899999999999999999999999999999999999999999999999999999999999999877543 22345
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.+.+..+|+.+|.|++|+|+.+||+.++..+|.. +++++.++|..+|.|+||.|+|+||+.+|..
T Consensus 82 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~~ 147 (148)
T 1exr_A 82 EEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMVS 147 (148)
T ss_dssp HHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHcc
Confidence 6789999999999999999999999999999987 8899999999999999999999999999864
|
| >2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.3e-24 Score=187.88 Aligned_cols=161 Identities=63% Similarity=1.016 Sum_probs=138.8
Q ss_pred HHHHhhhHHHHHHHHHHHhhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCce
Q 010013 347 KQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426 (520)
Q Consensus 347 ~~~~~~~~l~~~~~~~i~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i 426 (520)
++|...+.+++.++..+...++++++.++.++|..+|.|++|.|+.+||..++..++..++..++..+|..+|.|++|.|
T Consensus 1 ~~f~~~~~~~~~~~~~~~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i 80 (166)
T 2aao_A 1 KQFSAMNKFKKMALRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTI 80 (166)
T ss_dssp -----CHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHHGGGGTCCCCHHHHHHHHHHHCTTCCSSB
T ss_pred CchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeE
Confidence 35778889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcceeHHHHHHHH
Q 010013 427 DYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMM 506 (520)
Q Consensus 427 ~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~l 506 (520)
+|+||+.++.........+.+..+|+.+|.|++|.|+.+||+.++..+|. ++++++++|..+|.|+||.|+|+||+.++
T Consensus 81 ~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~ 159 (166)
T 2aao_A 81 DYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFGV-EDVRIEELMRDVDQDNDGRIDYNEFVAMM 159 (166)
T ss_dssp CHHHHHHHHTTCHHHHTTHHHHHHHHHHCTTCSSSBCHHHHHHHTCC---------CCHHHHHCTTCSSSBCHHHHHHHH
T ss_pred cHHHHHHHHHHHhhcccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCC-CHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence 99999998876554555678999999999999999999999999988774 46679999999999999999999999999
Q ss_pred Hc
Q 010013 507 RK 508 (520)
Q Consensus 507 ~~ 508 (520)
..
T Consensus 160 ~~ 161 (166)
T 2aao_A 160 QK 161 (166)
T ss_dssp C-
T ss_pred Hh
Confidence 76
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-24 Score=207.69 Aligned_cols=147 Identities=18% Similarity=0.211 Sum_probs=115.3
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCc---------------ccHHHHHHHHHHHHhccCCCCeeE
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR---------------DDVEDVRREVQIMHHLTGHRNIVE 132 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~---------------~~~~~~~~e~~~l~~l~~hp~iv~ 132 (520)
.|.+++.||+|+||.||+|.+ .+|+.||+|++........ .....+.+|+.+++++. |++++.
T Consensus 91 ~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~-~~~v~~ 168 (282)
T 1zar_A 91 VDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-GLAVPK 168 (282)
T ss_dssp CSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-TSSSCC
T ss_pred EEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-CCCcCe
Confidence 455669999999999999999 7899999999864321110 13456889999999998 555555
Q ss_pred EEEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeE
Q 010013 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKA 212 (520)
Q Consensus 133 l~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl 212 (520)
+ +.. +..++||||++|++|.+ +. ......++.|++.||.|||++||+||||||+|||++ ++.+||
T Consensus 169 ~---~~~-~~~~lvmE~~~g~~L~~-l~------~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~----~~~vkl 233 (282)
T 1zar_A 169 V---YAW-EGNAVLMELIDAKELYR-VR------VENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS----EEGIWI 233 (282)
T ss_dssp E---EEE-ETTEEEEECCCCEEGGG-CC------CSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE----TTEEEE
T ss_pred E---Eec-cceEEEEEecCCCcHHH-cc------hhhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE----CCcEEE
Confidence 4 433 45689999999999987 42 233557999999999999999999999999999995 567999
Q ss_pred eecccccccCCCCcccccccCCCccCchhhc
Q 010013 213 TDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR 243 (520)
Q Consensus 213 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~ 243 (520)
+|||++.. +..++|||.+.
T Consensus 234 ~DFG~a~~------------~~~~~a~e~l~ 252 (282)
T 1zar_A 234 IDFPQSVE------------VGEEGWREILE 252 (282)
T ss_dssp CCCTTCEE------------TTSTTHHHHHH
T ss_pred EECCCCeE------------CCCCCHHHHHH
Confidence 99999874 33578999874
|
| >3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B | Back alignment and structure |
|---|
Probab=99.91 E-value=5.9e-24 Score=183.01 Aligned_cols=141 Identities=25% Similarity=0.474 Sum_probs=127.7
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc-chhhh
Q 010013 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM-NRVER 443 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~-~~~~~ 443 (520)
..++++++++++++|+.||+|++|.|+.+||..+++.+|..++.+++..++. +++|.|+|.+|+.++... .....
T Consensus 8 ~~Lt~~qi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~----~~~~~i~f~ef~~~~~~~~~~~~~ 83 (153)
T 3i5g_B 8 VKLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLK----ECPGQLNFTAFLTLFGEKVSGTDP 83 (153)
T ss_dssp TTCCHHHHHHHHHHHHHHCCSTTSCCCHHHHHHHHHHTTSCCCHHHHHHHHH----TSSSCCCSHHHHHTTTTTTTTCCC
T ss_pred cCCCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCccHHHHHHHHH----hccCCccHHHHHHHHHhhhccccc
Confidence 3589999999999999999999999999999999999999999998888775 457889999999987643 33346
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHcCC
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGN 510 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~~~ 510 (520)
.+.++.+|+.||.|++|+|+.+||+.+|..+|.. ++++++++|..+|.| ||.|+|+||+++|.+..
T Consensus 84 ~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~ei~~~~~~~D~~-dG~I~y~EF~~~m~~~~ 150 (153)
T 3i5g_B 84 EDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPLK-NKQFNYNKMVDIKGKAE 150 (153)
T ss_dssp HHHHHHHHHTTCSSCSSCCCHHHHHHHHHSSSSCCCHHHHHHHHTTCCEE-TTEECHHHHHHHHHCSC
T ss_pred HHHHHHHHhccccCCCCeEeHHHHHHHHHHcCCcCCHHHHHHHHHHhCCC-cCEEcHHHHHHHhcCCC
Confidence 7889999999999999999999999999999988 999999999999988 99999999999998743
|
| >4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.6e-23 Score=178.03 Aligned_cols=144 Identities=38% Similarity=0.622 Sum_probs=131.2
Q ss_pred HHhhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc-chh
Q 010013 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM-NRV 441 (520)
Q Consensus 363 i~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~-~~~ 441 (520)
|+..++++++.++.++|..+|.|++|.|+.+||..++..++..++..++..+|..+|.+++|.|+|+||+.++... ...
T Consensus 1 m~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~ 80 (147)
T 4ds7_A 1 MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCN 80 (147)
T ss_dssp ---CCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTH
T ss_pred CCCcCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccCC
Confidence 3567889999999999999999999999999999999999999999999999999999999999999999987643 223
Q ss_pred hhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHH
Q 010013 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507 (520)
Q Consensus 442 ~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~ 507 (520)
...+.+..+|+.+|.|++|.|+.+||+.++..+|.. +++++..+|..+| |+||.|+|+||+.+|+
T Consensus 81 ~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~l~ 146 (147)
T 4ds7_A 81 DSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVS-DGSGEINIKQFAALLS 146 (147)
T ss_dssp HHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHS-SSCSSEEHHHHHHHTT
T ss_pred CcHHHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHh
Confidence 456789999999999999999999999999999987 8899999999999 9999999999999875
|
| >3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A | Back alignment and structure |
|---|
Probab=99.90 E-value=4.4e-23 Score=181.23 Aligned_cols=144 Identities=37% Similarity=0.615 Sum_probs=132.6
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc-chhhh
Q 010013 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM-NRVER 443 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~-~~~~~ 443 (520)
..++++++.++.++|..+|.|++|.|+.+||..++..++..++..++..+|..+|.|++|.|+|+||+.++... .....
T Consensus 20 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~ 99 (169)
T 3qrx_A 20 VGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDS 99 (169)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccCc
Confidence 46788999999999999999999999999999999999999999999999999999999999999999987643 23344
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.+.+..+|+.+|.|++|+|+.+||+.++..+|.. +++++..+|..+|.|+||.|+|+||+.+|++
T Consensus 100 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 165 (169)
T 3qrx_A 100 REEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK 165 (169)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCCSSSSCBCHHHHHHHHC-
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence 6789999999999999999999999999999987 8899999999999999999999999999976
|
| >3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-23 Score=181.59 Aligned_cols=144 Identities=30% Similarity=0.505 Sum_probs=131.2
Q ss_pred HhhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchh--
Q 010013 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRV-- 441 (520)
Q Consensus 364 ~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~-- 441 (520)
.+.+++++++++.++|..+|.|++|.|+.+||..++..++..++..++..+|..+|.+++|.|+|+||+.++......
T Consensus 2 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~ 81 (153)
T 3ox6_A 2 DRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAET 81 (153)
T ss_dssp CSCCCHHHHHHHHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCC
T ss_pred cccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhccc
Confidence 456889999999999999999999999999999999999999999999999999999999999999999987532211
Q ss_pred ---hhHHHHHHHHhhhcCCCCCceeHHHHHHHHHh-cCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHH
Q 010013 442 ---EREEHLYKAFEYFDKDNSGYITMEELEHALKK-YNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507 (520)
Q Consensus 442 ---~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~-~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~ 507 (520)
...+.++.+|+.+|.|++|+|+.+||+.++.. +|.. +++++..+|..+|.|+||.|+|+||+.+|+
T Consensus 82 ~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 152 (153)
T 3ox6_A 82 ADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 152 (153)
T ss_dssp HHHHCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSSCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHTC
T ss_pred cccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 22567999999999999999999999999998 7877 889999999999999999999999999875
|
| >3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A | Back alignment and structure |
|---|
Probab=99.90 E-value=4.9e-23 Score=179.31 Aligned_cols=145 Identities=28% Similarity=0.500 Sum_probs=134.1
Q ss_pred HhhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc-chhh
Q 010013 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM-NRVE 442 (520)
Q Consensus 364 ~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~-~~~~ 442 (520)
...++++++.++.++|..+|.+++|.|+.+||..++..++..++.+++..+|..+|.+++|.|+|+||+.++... ....
T Consensus 14 ~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~ 93 (161)
T 3fwb_A 14 NSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRD 93 (161)
T ss_dssp TTTSCHHHHHHHHHHHHHHCTTSSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTCC
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcCC
Confidence 356889999999999999999999999999999999999999999999999999999999999999999987643 2334
Q ss_pred hHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 443 REEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 443 ~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
....++.+|+.+|.|++|+|+.+||+.++..+|.. +++++..+|..+|.|+||.|+|+||+.+|++
T Consensus 94 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 160 (161)
T 3fwb_A 94 PLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEFIAICTD 160 (161)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCSSSSSSEEHHHHHHHHHH
T ss_pred cHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 56789999999999999999999999999999988 8899999999999999999999999999875
|
| >2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.1e-23 Score=181.12 Aligned_cols=144 Identities=26% Similarity=0.518 Sum_probs=132.2
Q ss_pred hhhhHHHHhhHHHHhcccC-CCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchh--
Q 010013 365 ENLSEEEIMGLKEMFKSMD-TDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRV-- 441 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D-~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~-- 441 (520)
..++++++.++.++|..+| .|++|.|+.+||..++..++..++..++..+|..+|.+++|.|+|+||+.++......
T Consensus 5 ~~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~ 84 (158)
T 2jnf_A 5 SKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEV 84 (158)
T ss_dssp TTSCHHHHHHHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCCC
T ss_pred hhCCHHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcccc
Confidence 4578889999999999999 9999999999999999999999999999999999999999999999999987643221
Q ss_pred ---hhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 442 ---EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 442 ---~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.....++.+|+.+|.|++|+|+.+||+.++..+|.. +++++..+|..+|.|+||.|+|+||+.+|.+
T Consensus 85 ~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 155 (158)
T 2jnf_A 85 NPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMTG 155 (158)
T ss_dssp CTTTTSSTHHHHHHHHCSSSSSSEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCSSCCSEECSHHHHHHTSS
T ss_pred chhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCcCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence 445679999999999999999999999999999987 8899999999999999999999999999876
|
| >2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.1e-23 Score=177.64 Aligned_cols=139 Identities=28% Similarity=0.534 Sum_probs=127.7
Q ss_pred hHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhc-cchhhhHHH
Q 010013 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH-MNRVEREEH 446 (520)
Q Consensus 368 ~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~-~~~~~~~~~ 446 (520)
+++++.++.++|..+|.|++|.|+.+||..++..++..++..++..+|..+|.|++|.|+|+||+.++.. .......+.
T Consensus 1 ~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~ 80 (142)
T 2bl0_C 1 GDDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDI 80 (142)
T ss_dssp CCHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChHHH
Confidence 3567889999999999999999999999999999999999999999999999999999999999998764 233345778
Q ss_pred HHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHH
Q 010013 447 LYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507 (520)
Q Consensus 447 ~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~ 507 (520)
++.+|+.+|.|++|+|+.+||+.++..+|.. +++++..+|..+| |+||.|+|+||+.+|.
T Consensus 81 ~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~~ 141 (142)
T 2bl0_C 81 LRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLGITE-TEKGQIRYDNFINTMF 141 (142)
T ss_dssp HHHHHHHTCCSSCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHHC-CSSSEECSHHHHTTTC
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCCCcEeHHHHHHHHc
Confidence 9999999999999999999999999999977 8899999999999 9999999999998764
|
| >1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... | Back alignment and structure |
|---|
Probab=99.89 E-value=3.6e-23 Score=180.18 Aligned_cols=146 Identities=32% Similarity=0.558 Sum_probs=131.8
Q ss_pred HHhhhhHHHHhhHHHHhcccCCCC-CCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccc--
Q 010013 363 IAENLSEEEIMGLKEMFKSMDTDN-SGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN-- 439 (520)
Q Consensus 363 i~~~~~~~~~~~l~~~F~~~D~~~-~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~-- 439 (520)
+...++++++.++.++|..+|.|+ +|.|+.+||..++..+|..++.+++..+|..+|.|++|.|+|+||+.++....
T Consensus 8 ~~~~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~ 87 (161)
T 1dtl_A 8 AVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKD 87 (161)
T ss_dssp GGGGSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-
T ss_pred HHhhCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcc
Confidence 346788999999999999999999 99999999999999999999999999999999999999999999999876532
Q ss_pred --hhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 440 --RVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 440 --~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.......++.+|+.+|.|++|+|+.+||+.++..+|.. +++++..+|..+|.|+||.|+|+||+.+|..
T Consensus 88 ~~~~~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 159 (161)
T 1dtl_A 88 DSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159 (161)
T ss_dssp ----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHC
T ss_pred cccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHc
Confidence 33456779999999999999999999999999999877 8899999999999999999999999999874
|
| >1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... | Back alignment and structure |
|---|
Probab=99.89 E-value=1.3e-22 Score=176.90 Aligned_cols=146 Identities=34% Similarity=0.582 Sum_probs=133.9
Q ss_pred HHhhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccch-h
Q 010013 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNR-V 441 (520)
Q Consensus 363 i~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~-~ 441 (520)
+...++++++.++.++|..+|.|++|.|+.+||..++..++..++.+++..+|..+|.+++|.|+|+||+.++..... .
T Consensus 10 ~~~~ls~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~ 89 (162)
T 1top_A 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKED 89 (162)
T ss_dssp HHHHSCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHH
T ss_pred hhhhcCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhccc
Confidence 456799999999999999999999999999999999999999999999999999999999999999999988764322 1
Q ss_pred h---hHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 442 E---REEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 442 ~---~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
. ....++.+|+.+|.|++|+|+.+||+.++..+|.. +++++..+|..+|.|+||.|+|+||+.+|..
T Consensus 90 ~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 160 (162)
T 1top_A 90 AKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 160 (162)
T ss_dssp HHHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHS
T ss_pred cccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhh
Confidence 2 56679999999999999999999999999999977 8899999999999999999999999999864
|
| >2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A | Back alignment and structure |
|---|
Probab=99.89 E-value=6.6e-23 Score=181.95 Aligned_cols=145 Identities=41% Similarity=0.702 Sum_probs=129.4
Q ss_pred HhhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccc-hhh
Q 010013 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN-RVE 442 (520)
Q Consensus 364 ~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~-~~~ 442 (520)
+..++++++.++.++|..+|.|++|.|+.+||..++..++..++..+++.+|..+|.|++|.|+|+||+.++.... ...
T Consensus 2 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~~ 81 (179)
T 2f2o_A 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTD 81 (179)
T ss_dssp ----CCSHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHccCcc
Confidence 4567889999999999999999999999999999999999999999999999999999999999999998876432 234
Q ss_pred hHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 443 REEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 443 ~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
....+..+|+.+|.|++|+|+.+||+.++..+|.. +++++..+|..+|.|+||.|+|+||+.+|..
T Consensus 82 ~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 148 (179)
T 2f2o_A 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148 (179)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC--CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHSCC
T ss_pred cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence 56779999999999999999999999999999887 8899999999999999999999999999976
|
| >1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.9e-23 Score=179.31 Aligned_cols=138 Identities=20% Similarity=0.374 Sum_probs=124.1
Q ss_pred HHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHh-cCCCCCceehhhhHHHhhcc------chhhh
Q 010013 371 EIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAA-DVDGNGTIDYIEFITATMHM------NRVER 443 (520)
Q Consensus 371 ~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~-d~~~~g~i~~~ef~~~~~~~------~~~~~ 443 (520)
+++++.++|..+|.|++|.|+.+||..++..+|..++..++..+|..+ |.+++|.|+|+||+.++... .....
T Consensus 2 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~ 81 (148)
T 1m45_A 2 ATRANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAK 81 (148)
T ss_dssp -CCCCTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCC
T ss_pred hHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhcccccccc
Confidence 456788999999999999999999999999999999999999999999 99999999999999987655 33345
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
...++.+|+.+|.|++|+|+.+||+.++..+|.. +++++..+|..+|.|+||.|+|+||+.+|.+
T Consensus 82 ~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~~ 147 (148)
T 1m45_A 82 TEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVLR 147 (148)
T ss_dssp THHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence 6789999999999999999999999999999987 8899999999999999999999999999874
|
| >1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... | Back alignment and structure |
|---|
Probab=99.89 E-value=5.2e-23 Score=178.22 Aligned_cols=143 Identities=25% Similarity=0.410 Sum_probs=131.8
Q ss_pred hhhHHHHhhHHHHhcccCC--CCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccch--h
Q 010013 366 NLSEEEIMGLKEMFKSMDT--DNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNR--V 441 (520)
Q Consensus 366 ~~~~~~~~~l~~~F~~~D~--~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~--~ 441 (520)
.++++++.++.++|..+|. |++|.|+.+||..++..+|..++..++..+ ..+|.+++|.|+|+||+.++..... .
T Consensus 2 ~ls~~~~~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~~~ 80 (156)
T 1wdc_C 2 KLSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQ 80 (156)
T ss_dssp -CCHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTSCC
T ss_pred CCCHHHHHHHHHHHHHHccCCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHHhhccC
Confidence 4678899999999999999 999999999999999999999999999999 9999999999999999998765433 4
Q ss_pred hhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHH--hcCCCCcceeHHHHHHHHHcC
Q 010013 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAE--VDIDNDGRINYEEFAAMMRKG 509 (520)
Q Consensus 442 ~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~--~d~~~dg~i~~~ef~~~l~~~ 509 (520)
.....++.+|+.||.|++|+|+.+||+.++..+|.. +++++..+|.. +|.|+||.|+|+||+.+|...
T Consensus 81 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 151 (156)
T 1wdc_C 81 GTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAG 151 (156)
T ss_dssp CCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHHC
T ss_pred ChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCCcEeHHHHHHHHhcC
Confidence 556789999999999999999999999999999987 88999999999 999999999999999999873
|
| >3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A | Back alignment and structure |
|---|
Probab=99.89 E-value=8.9e-23 Score=187.15 Aligned_cols=155 Identities=21% Similarity=0.252 Sum_probs=137.6
Q ss_pred HHHHhhhHHHHHHHHHHHhhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCce
Q 010013 347 KQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426 (520)
Q Consensus 347 ~~~~~~~~l~~~~~~~i~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i 426 (520)
..+...+.+++..+.-+...+++++++++.++|+.+|.|++|.|+.+||..++..+|..++.++++.+|..+|.|++|.|
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~l~~~e~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I 104 (220)
T 3sjs_A 25 CIYQMPPSVRNTWWFPLLNTIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHI 104 (220)
T ss_dssp HHHHSCHHHHTSTTGGGGGGCCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHCCBGGGBCCCHHHHHHHHHHHCTTCSSCB
T ss_pred hccCCChhHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcC
Confidence 33444455555555556788999999999999999999999999999999999999999999999999999999999999
Q ss_pred ehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHH
Q 010013 427 DYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAM 505 (520)
Q Consensus 427 ~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~ 505 (520)
+|+||+.++... ..++.+|+.+|.|++|+|+.+||+.++..+|.. ++++++.++..+| |+||.|+|+||+++
T Consensus 105 ~~~EF~~~~~~~------~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~d-d~dg~I~~~eF~~~ 177 (220)
T 3sjs_A 105 SFYEFMAMYKFM------ELAYNLFVMNARARSGTLEPHEILPALQQLGFYINQRTSLLLHRLFA-RGMAFCDLNCWIAI 177 (220)
T ss_dssp CHHHHHHHHHHH------HHHHHHHHHHCCSSTTEECHHHHHHHHHHHTCCCCHHHHHHHHHHHC---CCSEEHHHHHHH
T ss_pred CHHHHHHHHHHH------HHHHHHHHHHCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHH
Confidence 999999977543 568999999999999999999999999999988 8899999999999 99999999999998
Q ss_pred HHc
Q 010013 506 MRK 508 (520)
Q Consensus 506 l~~ 508 (520)
+..
T Consensus 178 ~~~ 180 (220)
T 3sjs_A 178 CAF 180 (220)
T ss_dssp HHH
T ss_pred HHH
Confidence 864
|
| >3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} | Back alignment and structure |
|---|
Probab=99.88 E-value=6.8e-23 Score=174.68 Aligned_cols=139 Identities=27% Similarity=0.505 Sum_probs=127.1
Q ss_pred hhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc-chhhhHH
Q 010013 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM-NRVEREE 445 (520)
Q Consensus 367 ~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~-~~~~~~~ 445 (520)
+++++++++.++|..+|.|++|.|+.+||..++..+|..++.+++..++.. ++|.|+|+||+.++... ......+
T Consensus 1 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~----~~g~i~~~eF~~~~~~~~~~~~~~~ 76 (143)
T 3j04_B 1 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSE----APGPINFTMFLTMFGEKLNGTDPED 76 (143)
T ss_dssp CCHHHHHHHHHHHTTTCSSCTTCCCHHHHHHHHHHTSCCCCHHHHHTTTTT----SSSCCCHHHHHHHHHHTTTSSCCHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHh----CCCCcCHHHHHHHHHHHhccCCcHH
Confidence 467889999999999999999999999999999999999999998888775 89999999999987643 3344567
Q ss_pred HHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHcC
Q 010013 446 HLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRKG 509 (520)
Q Consensus 446 ~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~~ 509 (520)
.++.+|+.||.|++|+|+.+||+.++..+|.. +++++..+|..+|.|+||.|+|+||+.+|.+.
T Consensus 77 ~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 141 (143)
T 3j04_B 77 VIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKHG 141 (143)
T ss_dssp HHHHHHTTSCSSSCCCCCTTTHHHHHHTSSSCCCHHHHHHHHHHTTCCSSSCCCSTHHHHHHHSS
T ss_pred HHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHhcc
Confidence 89999999999999999999999999999987 88999999999999999999999999999874
|
| >2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* | Back alignment and structure |
|---|
Probab=99.88 E-value=3.7e-22 Score=171.28 Aligned_cols=140 Identities=21% Similarity=0.376 Sum_probs=129.2
Q ss_pred hhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHh---cCCCCCceehhhhHHHhhcc---ch
Q 010013 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAA---DVDGNGTIDYIEFITATMHM---NR 440 (520)
Q Consensus 367 ~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~---d~~~~g~i~~~ef~~~~~~~---~~ 440 (520)
++++++.++.++|..+|.+++|.|+.+||..++..++..++.+++..++..+ |.++ |.|+|+||+.++... ..
T Consensus 2 l~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~~ 80 (149)
T 2mys_C 2 FSKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNKD 80 (149)
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccCC
Confidence 5788999999999999999999999999999999999999999999999999 9999 999999999987653 23
Q ss_pred hhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 441 VEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 441 ~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
......++.+|+.+|.|++|+|+.+||+.++..+|.. +++++..+|.. |.|+||.|+|+||+.+|.+
T Consensus 81 ~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~-d~~~dg~i~~~eF~~~~~~ 148 (149)
T 2mys_C 81 QGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG-QEDSNGCINYEAFVKHIMS 148 (149)
T ss_pred cchHHHHHHHHHHhCCCCCceEcHHHHHHHHHHhCCCCCHHHHHHHHhh-CCCCCCcEeHHHHHHHHhc
Confidence 3456789999999999999999999999999999987 88999999999 9999999999999999864
|
| >2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.9e-22 Score=179.83 Aligned_cols=152 Identities=13% Similarity=0.181 Sum_probs=133.8
Q ss_pred hhhhHHHHhhHHHHhccc-CCCCCCcccHHHHhhhhhhc----CCCCCHHHHHHHH-----------HHhcCCCCCceeh
Q 010013 365 ENLSEEEIMGLKEMFKSM-DTDNSGTITFEELKAGLPKL----GTRLSESEVRQLM-----------EAADVDGNGTIDY 428 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~-D~~~~g~i~~~e~~~~l~~~----~~~~~~~~~~~~~-----------~~~d~~~~g~i~~ 428 (520)
..+++++.+++.++|+.+ |.|++|.|+.+||..++..+ |..++..++..++ ..+|.|++|.|++
T Consensus 4 ~~ls~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~~ 83 (191)
T 2ccm_A 4 HQLSDFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVTK 83 (191)
T ss_dssp CCCCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEH
T ss_pred hhccHHHHHHHHHhccccccCCCCCeeeHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeECH
Confidence 456788889999999999 99999999999999999988 8888888888888 9999999999999
Q ss_pred hhhHHHhhccc---------hhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcceeH
Q 010013 429 IEFITATMHMN---------RVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINY 499 (520)
Q Consensus 429 ~ef~~~~~~~~---------~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i~~ 499 (520)
+||+.++.... .......++.+|+.+|.|++|+|+.+||..++..+| .++++++.+|..+|.|+||.|+|
T Consensus 84 ~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~g-~~~~~~~~~~~~~D~d~dG~i~~ 162 (191)
T 2ccm_A 84 EEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYG-IPKSDCDAAFDTLSDGGKTMVTR 162 (191)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHTTT-CCHHHHHHHHHHHTTTTTSCCBH
T ss_pred HHHHHHHHHHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC-CCHHHHHHHHHHhCCCCCCCcCH
Confidence 99998876532 123456799999999999999999999999999888 57788999999999999999999
Q ss_pred HHHHHHHHc----CCCCCCCCc
Q 010013 500 EEFAAMMRK----GNPDMVGNR 517 (520)
Q Consensus 500 ~ef~~~l~~----~~~~~~~~~ 517 (520)
+||+.++.. .+|+.++|.
T Consensus 163 ~Ef~~~~~~~~~s~d~~~~~~~ 184 (191)
T 2ccm_A 163 EIFARLWTEYFVSNDRGAKGNH 184 (191)
T ss_dssp HHHHHHHHHHHHCCCTTCGGGG
T ss_pred HHHHHHHHHHhcCCCCCCCcce
Confidence 999999875 466777653
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.88 E-value=4.6e-22 Score=175.85 Aligned_cols=141 Identities=20% Similarity=0.281 Sum_probs=125.8
Q ss_pred hhHHHHhhHHHHhcccCCCCCCcccHHHHhh----hhhhcCCCCCHHHHH-----------HHHHHhcCCCCCceehhhh
Q 010013 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKA----GLPKLGTRLSESEVR-----------QLMEAADVDGNGTIDYIEF 431 (520)
Q Consensus 367 ~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~----~l~~~~~~~~~~~~~-----------~~~~~~d~~~~g~i~~~ef 431 (520)
+++++++++.++|..+|.|++|.|+.+||.. ++..+|..++.+++. .+|..+|.|++|.|+++||
T Consensus 1 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~~~~~l~~~g~~~~~~~~~~l~~~~~~~~~~lf~~~D~d~dg~i~~~Ef 80 (176)
T 1nya_A 1 TTAIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQF 80 (176)
T ss_dssp CCSHHHHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHH
T ss_pred CcHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHH
Confidence 3567889999999999999999999999999 688889888888876 8899999999999999999
Q ss_pred HHHhhccchhh--------hHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcceeHHHHH
Q 010013 432 ITATMHMNRVE--------REEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFA 503 (520)
Q Consensus 432 ~~~~~~~~~~~--------~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~ 503 (520)
+.++....... ....++.+|+.+|.|++|+|+.+||+.++..+| .+++++..+|..+|.|+||.|+|+||+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g-~~~~~~~~~~~~~D~d~dg~i~~~ef~ 159 (176)
T 1nya_A 81 IRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG-MSKAEAAEAFNQVDTNGNGELSLDELL 159 (176)
T ss_dssp HHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT-CCHHHHHHHHHHHCTTCSSEEEHHHHH
T ss_pred HHHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhC-CCHHHHHHHHHHhCCCCCCCCcHHHHH
Confidence 99876432211 246789999999999999999999999999998 678899999999999999999999999
Q ss_pred HHHHc
Q 010013 504 AMMRK 508 (520)
Q Consensus 504 ~~l~~ 508 (520)
.++..
T Consensus 160 ~~~~~ 164 (176)
T 1nya_A 160 TAVRD 164 (176)
T ss_dssp HHHSC
T ss_pred HHHHH
Confidence 99976
|
| >2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.5e-22 Score=182.91 Aligned_cols=152 Identities=16% Similarity=0.298 Sum_probs=121.2
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCC--CCCHHHHHHHH-------HHhcCCCCCceehhhhHHHh
Q 010013 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGT--RLSESEVRQLM-------EAADVDGNGTIDYIEFITAT 435 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~--~~~~~~~~~~~-------~~~d~~~~g~i~~~ef~~~~ 435 (520)
..++++++.++.++|..+|.|++|.|+.+||..++..++. .++.+++..++ ..+|.|++|.|+|+||+.++
T Consensus 28 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~~~ 107 (208)
T 2hpk_A 28 EDLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEAN 107 (208)
T ss_dssp --------CHHHHHHHHHCTTCSSEECHHHHTHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCBTTTBEEGGGHHHHH
T ss_pred HHcCHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHH
Confidence 5678888999999999999999999999999999999887 88999999999 99999999999999999987
Q ss_pred h---------ccc-hhhhH-HHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcceeHHHHHH
Q 010013 436 M---------HMN-RVERE-EHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAA 504 (520)
Q Consensus 436 ~---------~~~-~~~~~-~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~ 504 (520)
. ... ..... +.++.+|+.+|.|++|+|+.+||+.++..+| .+++++..+|..+|.|+||.|+|+||+.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g-~~~~~~~~~~~~~D~d~dG~I~~~EF~~ 186 (208)
T 2hpk_A 108 RVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAFD-VPQEAAYTFFEKADTDKSGKLERTELVH 186 (208)
T ss_dssp HHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTT-SCTTHHHHHHHHHCTTCCSSBCHHHHHH
T ss_pred HHHhhhhhhhhccCChHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC-cCHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence 5 221 11223 3389999999999999999999999999998 5667899999999999999999999999
Q ss_pred HHHc----C-CCCCCCCc
Q 010013 505 MMRK----G-NPDMVGNR 517 (520)
Q Consensus 505 ~l~~----~-~~~~~~~~ 517 (520)
++.. . +|..+++.
T Consensus 187 ~~~~~~~~~~d~~~~g~~ 204 (208)
T 2hpk_A 187 LFRKFWMEPYDPQWDGVY 204 (208)
T ss_dssp HHHHHHC-----------
T ss_pred HHHHHhcCCCCCCCcchh
Confidence 9976 4 56667664
|
| >2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
Probab=99.87 E-value=6.9e-22 Score=168.76 Aligned_cols=134 Identities=29% Similarity=0.507 Sum_probs=124.1
Q ss_pred HHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc--chhhhHHHHHHHHh
Q 010013 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM--NRVEREEHLYKAFE 452 (520)
Q Consensus 375 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~--~~~~~~~~~~~~F~ 452 (520)
+.++|..+|.|++|.|+.+||..++..++..++.+++..++.. +++|.|+|+||+.++... ........++.+|+
T Consensus 7 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~---~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~~~F~ 83 (145)
T 2bl0_B 7 IQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQ---LNAKEFDLATFKTVYRKPIKTPTEQSKEMLDAFR 83 (145)
T ss_dssp HHHHHHHHCTTCSSCEEGGGHHHHHHHTTCCCCHHHHHHHHHH---HTSSEECHHHHHHHHTSCCCCGGGGHHHHHHHHH
T ss_pred HHHHHHHhCCCCcCccCHHHHHHHHHHhCCCCCHHHHHHHHHh---cCCCeEcHHHHHHHHHHHhhcCcccHHHHHHHHH
Confidence 8999999999999999999999999999999999999999988 889999999999988754 34556788999999
Q ss_pred hhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHcCCC
Q 010013 453 YFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGNP 511 (520)
Q Consensus 453 ~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~~~~ 511 (520)
.+|.|++|+|+.+||+.++..+|.. ++++++.+|..+|.|+||.|+|+||+.++.++.|
T Consensus 84 ~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~ 143 (145)
T 2bl0_B 84 ALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESFVDMLVTGYP 143 (145)
T ss_dssp HHCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHHSSC
T ss_pred HhCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHHHhcCC
Confidence 9999999999999999999999987 8899999999999999999999999999987543
|
| >1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.87 E-value=3.1e-23 Score=185.50 Aligned_cols=143 Identities=63% Similarity=1.014 Sum_probs=129.9
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhH
Q 010013 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVERE 444 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~ 444 (520)
..+++++++++.++|..+|.|++|.|+.+||..++..++..++.+++..+|..+|.|++|.|+|+||+.++.........
T Consensus 2 ~~ls~~~~~~l~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~ 81 (188)
T 1s6i_A 2 ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLERE 81 (188)
T ss_dssp CSSSCTTTCSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCC
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHhccCHH
Confidence 35778889999999999999999999999999999999999999999999999999999999999999987655433445
Q ss_pred HHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 445 EHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 445 ~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
+.++.+|+.+|.|++|+|+.+||+.++..+|. +++++.++|..+|.|+||.|+|+||+.+|..
T Consensus 82 ~~l~~~F~~~D~d~dG~Is~~El~~~l~~~g~-~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~ 144 (188)
T 1s6i_A 82 ENLVSAFSYFDKDGSGYITLDEIQQACKDFGL-DDIHIDDMIKEIDQDNDGQIDYGEFAAMMRK 144 (188)
T ss_dssp CSTHHHHHHTTTTCSSEEEHHHHHHTTTTTTC-CTTHHHHHHHHHCSSSSSEEETTHHHHTTSC
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCC-CHHHHHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence 67899999999999999999999999998874 4567999999999999999999999999975
|
| >1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C | Back alignment and structure |
|---|
Probab=99.87 E-value=4.4e-23 Score=177.62 Aligned_cols=142 Identities=22% Similarity=0.421 Sum_probs=120.5
Q ss_pred hhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCC--CCCceehhhhHHHhhccch---
Q 010013 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVD--GNGTIDYIEFITATMHMNR--- 440 (520)
Q Consensus 366 ~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~--~~g~i~~~ef~~~~~~~~~--- 440 (520)
.+++++++++.++|..+|.|++|.|+.+||..++..+|..++..++..+|..+|.+ ++|.|+|+||+.++.....
T Consensus 3 ~ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~~~ 82 (151)
T 1w7j_B 3 EFNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRG 82 (151)
T ss_dssp --------CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC---
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhccCC
Confidence 46788999999999999999999999999999999999999999999999999999 9999999999998764322
Q ss_pred hhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 441 VEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 441 ~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
......+..+|+.+|.|++|+|+.+||+.++..+|.. +++++..+|..+| |+||.|+|+||+.+|..
T Consensus 83 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~~~ 150 (151)
T 1w7j_B 83 QGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGHE-DSNGCINYEAFLKHILS 150 (151)
T ss_dssp -----CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCC-CTTSEEEHHHHHHHTC-
T ss_pred CCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHhcc-CCCCeEeHHHHHHHHhc
Confidence 2234568889999999999999999999999999987 8899999999999 99999999999998864
|
| >2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B | Back alignment and structure |
|---|
Probab=99.87 E-value=5.8e-22 Score=173.53 Aligned_cols=142 Identities=24% Similarity=0.418 Sum_probs=128.9
Q ss_pred HhhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCC-CCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc-chh
Q 010013 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGT-RLSESEVRQLMEAADVDGNGTIDYIEFITATMHM-NRV 441 (520)
Q Consensus 364 ~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~-~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~-~~~ 441 (520)
...++++++.++.++|..+|.|++|.|+.+||..++..+|. .++..++..++... +|.|+|+||+.++... ...
T Consensus 16 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~l~~~~----dg~i~~~eF~~~~~~~~~~~ 91 (166)
T 2mys_B 16 FSMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPINFTVFLTMFGEKLKGA 91 (166)
T ss_pred hhhCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHC----CCCcCHHHHHHHHHHHhccC
Confidence 34778899999999999999999999999999999999999 99999999999864 7999999999987643 233
Q ss_pred hhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHcC
Q 010013 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRKG 509 (520)
Q Consensus 442 ~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~~ 509 (520)
...+.++.+|+.||.|++|+|+.+||+.++..+|.. +++++..+|..+|.|+||.|+|+||+.+|...
T Consensus 92 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~I~~~eF~~~~~~~ 160 (166)
T 2mys_B 92 DPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITHG 160 (166)
T ss_pred CcHHHHHHHHHHhCCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHHhc
Confidence 456789999999999999999999999999999887 88999999999999999999999999999874
|
| >1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=3.7e-22 Score=179.67 Aligned_cols=152 Identities=22% Similarity=0.331 Sum_probs=125.7
Q ss_pred HhhhhHHHHhhHHHHhcccCCCCCCcccHHHHh-----hhhhhcCCCCCHH-----HHHHHHHHhcCCCCCceehhhhHH
Q 010013 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELK-----AGLPKLGTRLSES-----EVRQLMEAADVDGNGTIDYIEFIT 433 (520)
Q Consensus 364 ~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~-----~~l~~~~~~~~~~-----~~~~~~~~~d~~~~g~i~~~ef~~ 433 (520)
...+++++++++.++|..+|.|++|.|+.+||. .++..+|..++.. ++..+|..+|.|++|.|+|+||+.
T Consensus 11 ~~~~s~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~ 90 (195)
T 1qv0_A 11 TDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLD 90 (195)
T ss_dssp CCTTCHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHH
T ss_pred cccCCHHHHHHHHHHHhHcCCCCCCcCcHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHcCCCCCceEcHHHHHH
Confidence 345689999999999999999999999999999 7888888877776 689999999999999999999998
Q ss_pred Hhhccchhh-------hHHHH----HHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHH
Q 010013 434 ATMHMNRVE-------REEHL----YKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEE 501 (520)
Q Consensus 434 ~~~~~~~~~-------~~~~~----~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~e 501 (520)
++....... ..+.+ +.+|+.||.|++|+|+.+||+.++..+|.. ++++++++|..+|.|+||.|+|+|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~e 170 (195)
T 1qv0_A 91 GWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDE 170 (195)
T ss_dssp HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHHH
T ss_pred HHHHHHhhhhhcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCCHHH
Confidence 765432211 11123 389999999999999999999999999987 889999999999999999999999
Q ss_pred HHHHHHc----CCCCCCC
Q 010013 502 FAAMMRK----GNPDMVG 515 (520)
Q Consensus 502 f~~~l~~----~~~~~~~ 515 (520)
|+.++.. .+|+.||
T Consensus 171 F~~~~~~~~~s~d~~~~g 188 (195)
T 1qv0_A 171 MTRQHLGFWYTLDPEADG 188 (195)
T ss_dssp HHHHHHHHHTTCCGGGTT
T ss_pred HHHHHHHHccCCCccCcc
Confidence 9999876 3455554
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A | Back alignment and structure |
|---|
Probab=99.87 E-value=4.8e-22 Score=178.30 Aligned_cols=143 Identities=21% Similarity=0.305 Sum_probs=125.6
Q ss_pred hhhHHHHhhHHHHhcccCCCCCCcccHHHHh-----hhhhhcCCCCCHH-----HHHHHHHHhcCCCCCceehhhhHHHh
Q 010013 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELK-----AGLPKLGTRLSES-----EVRQLMEAADVDGNGTIDYIEFITAT 435 (520)
Q Consensus 366 ~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~-----~~l~~~~~~~~~~-----~~~~~~~~~d~~~~g~i~~~ef~~~~ 435 (520)
.+++++++++.++|..+|.|++|.|+.+||. .++..+|..++.. +++.+|..+|.|++|.|+|+||+.++
T Consensus 9 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~ 88 (191)
T 1uhk_A 9 FDNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGW 88 (191)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHH
T ss_pred cCCHHHHHHHHHHHhhccCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHHHH
Confidence 4578889999999999999999999999999 7888899888777 68999999999999999999999876
Q ss_pred hccchhh-------hHHHH----HHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHH
Q 010013 436 MHMNRVE-------REEHL----YKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFA 503 (520)
Q Consensus 436 ~~~~~~~-------~~~~~----~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~ 503 (520)
....... ..+.+ +.+|+.+|.|++|+|+.+||+.++..+|.. +++++..+|..+|.|+||.|+|+||+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~eF~ 168 (191)
T 1uhk_A 89 KKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMT 168 (191)
T ss_dssp HHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHH
T ss_pred HHHhcchhhhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence 5432111 11223 389999999999999999999999999987 88999999999999999999999999
Q ss_pred HHHHc
Q 010013 504 AMMRK 508 (520)
Q Consensus 504 ~~l~~ 508 (520)
.++..
T Consensus 169 ~~~~~ 173 (191)
T 1uhk_A 169 RQHLG 173 (191)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99986
|
| >1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-21 Score=169.87 Aligned_cols=144 Identities=21% Similarity=0.465 Sum_probs=127.1
Q ss_pred HHhhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc-chh
Q 010013 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM-NRV 441 (520)
Q Consensus 363 i~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~-~~~ 441 (520)
+...++++++.++.++|..+|.|++|.|+.+||..++..+|..++..++..++. +++|.|+|+||+.++... ...
T Consensus 8 ~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~ 83 (156)
T 1wdc_B 8 VLTKLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLSGT 83 (156)
T ss_dssp ----CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTCSC
T ss_pred hhccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHH----hCCCcCcHHHHHHHHHHHhcCC
Confidence 346688899999999999999999999999999999999999999999998885 478999999999987643 333
Q ss_pred hhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHcCCC
Q 010013 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGNP 511 (520)
Q Consensus 442 ~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~~~~ 511 (520)
...+.++.+|+.||.|++|+|+.+||+.++..+|.. +++++..+|..+|.| ||.|+|+||+.+|....+
T Consensus 84 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~-dg~i~~~eF~~~~~~~~~ 153 (156)
T 1wdc_B 84 DSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKGSGE 153 (156)
T ss_dssp CCHHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHHTSCC
T ss_pred ChHHHHHHHHHHHCcCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCC-CCEEeHHHHHHHHhcCcc
Confidence 456789999999999999999999999999999987 889999999999999 999999999999987543
|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.5e-21 Score=176.92 Aligned_cols=140 Identities=22% Similarity=0.412 Sum_probs=126.2
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccc-----
Q 010013 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN----- 439 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~----- 439 (520)
..+++++++++.++|..+|.|++|.|+.+||..+ ..++..++ +..+|..+|.|++|.|+|+||+.++....
T Consensus 21 ~~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~-~~lg~~~~---~~~l~~~~D~d~dg~i~~~EF~~~~~~~~~~~~~ 96 (202)
T 2bec_A 21 TGFSQASLLRLHHRFRALDRNKKGYLSRMDLQQI-GALAVNPL---GDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDE 96 (202)
T ss_dssp HCCCHHHHHHHHHHHHHHCSSCSSCCCHHHHHTC-HHHHHSTT---HHHHHHTTSCSSCCCCCHHHHHHHHGGGSCCCHH
T ss_pred cCCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH-HhcCCCcc---HHHHHHHhCCCCCCcCcHHHHHHHHHHhcccchh
Confidence 4678899999999999999999999999999999 77876655 89999999999999999999999876543
Q ss_pred ------------hhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhc-CCC-CHHHHHHHHHH----hcCCCCcceeHHH
Q 010013 440 ------------RVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY-NMG-DAKTIKEIIAE----VDIDNDGRINYEE 501 (520)
Q Consensus 440 ------------~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~-~~~-~~~~~~~~~~~----~d~~~dg~i~~~e 501 (520)
.....+.++.+|+.||.|++|+|+.+||+.++..+ |.. +++++..++.. +|.|+||.|+|+|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~E 176 (202)
T 2bec_A 97 DTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVE 176 (202)
T ss_dssp HHC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHSCCSCCCHHHHHHHHHHHHHHHCSSCSSSEEHHH
T ss_pred cccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCCCCcCcHHH
Confidence 34556789999999999999999999999999998 877 88888888888 9999999999999
Q ss_pred HHHHHHc
Q 010013 502 FAAMMRK 508 (520)
Q Consensus 502 f~~~l~~ 508 (520)
|+.+|..
T Consensus 177 F~~~~~~ 183 (202)
T 2bec_A 177 FTKSLEK 183 (202)
T ss_dssp HHHTTTT
T ss_pred HHHHHHH
Confidence 9999876
|
| >3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.2e-21 Score=177.70 Aligned_cols=141 Identities=26% Similarity=0.461 Sum_probs=123.1
Q ss_pred hHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHH
Q 010013 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHL 447 (520)
Q Consensus 368 ~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~ 447 (520)
...++.++.++|+.+|.|++|.|+.+||..++..++..++.++++.+|..+|.|++|.|+|+||+.++.........+.+
T Consensus 32 ~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~~~~~~~~ 111 (204)
T 3e3r_A 32 GASGIQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVI 111 (204)
T ss_dssp --------CHHHHHHCTTCCSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCCCHHHHHHH
T ss_pred CchhHHHHHHHHHHHccCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHhhcCchHHHHH
Confidence 35677889999999999999999999999999999999999999999999999999999999999988766555677889
Q ss_pred HHHHhhhcCCCCCceeHHHHHHHHHh-------cCCC-CHHHHHHHHHHhcC-CCCcceeHHHHHHHHHc
Q 010013 448 YKAFEYFDKDNSGYITMEELEHALKK-------YNMG-DAKTIKEIIAEVDI-DNDGRINYEEFAAMMRK 508 (520)
Q Consensus 448 ~~~F~~~D~d~dG~I~~~El~~~l~~-------~~~~-~~~~~~~~~~~~d~-~~dg~i~~~ef~~~l~~ 508 (520)
+.+|+.+|.|++|+|+.+||..++.. .+.. ++++++.+|..+|. |+||.|+|+||+.++..
T Consensus 112 ~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~dg~Is~~EF~~~~~~ 181 (204)
T 3e3r_A 112 AAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEFQDYYSG 181 (204)
T ss_dssp HHHHHHHCTTCSSEECHHHHHHHCCCTTCHHHHTTSSCHHHHHHHHHHHHSCSSCCSCEEHHHHHHHHHH
T ss_pred HHHHHHhCcCCCCeEeHHHHHHHHccccCCccccCCCChHHHHHHHHHHhhccCCCCcCcHHHHHHHHHH
Confidence 99999999999999999999999974 3444 56779999999998 99999999999999986
|
| >3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* | Back alignment and structure |
|---|
Probab=99.86 E-value=3.1e-21 Score=166.64 Aligned_cols=137 Identities=36% Similarity=0.632 Sum_probs=121.4
Q ss_pred hHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccc-hhhhHHH
Q 010013 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN-RVEREEH 446 (520)
Q Consensus 368 ~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~-~~~~~~~ 446 (520)
++++++++.++|..+|.|++|.|+.+|| ..+..++..+ ++..+|..+|.|++|.|+|+||+.++.... .....+.
T Consensus 1 s~~~~~~l~~~F~~~D~d~~G~i~~~el-~~l~~~~~~~---~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~ 76 (155)
T 3ll8_B 1 DADEIKRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQNP---LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQK 76 (155)
T ss_dssp CCHHHHHHHHHHHHHCTTCSSSBCHHHH-TTSGGGTTCT---THHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHHH
T ss_pred CHHHHHHHHHHHHHhCcCCCCeEcHHHH-HHhhccccch---HHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHHH
Confidence 3578899999999999999999999999 6677777554 788999999999999999999999887543 3355678
Q ss_pred HHHHHhhhcCCCCCceeHHHHHHHHHh-cCCC-CHHHHHHHHHH----hcCCCCcceeHHHHHHHHHc
Q 010013 447 LYKAFEYFDKDNSGYITMEELEHALKK-YNMG-DAKTIKEIIAE----VDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 447 ~~~~F~~~D~d~dG~I~~~El~~~l~~-~~~~-~~~~~~~~~~~----~d~~~dg~i~~~ef~~~l~~ 508 (520)
++.+|+.+|.|++|+|+.+||+.++.. .|.. +.+++..++.. +|.|+||.|+|+||+.++..
T Consensus 77 ~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 144 (155)
T 3ll8_B 77 LRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGG 144 (155)
T ss_dssp HHHHHHHHCTTCSSCBCHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHCTTSSSSBCHHHHHHHHGG
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 999999999999999999999999998 5766 88888888888 99999999999999999986
|
| >3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-21 Score=176.50 Aligned_cols=141 Identities=22% Similarity=0.432 Sum_probs=128.5
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhc-cchhhh
Q 010013 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH-MNRVER 443 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~-~~~~~~ 443 (520)
..++++++.+|.++|..+|.|++|.|+.+||..+|..+|..++..++..++..+ +|.|+|+||+.++.. ......
T Consensus 49 ~~ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~----~g~i~~~eF~~~~~~~~~~~~~ 124 (196)
T 3dtp_E 49 AMFTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEA----PGPINFTMFLTIFGDRIAGTDE 124 (196)
T ss_dssp CSSCTTTHHHHHHHHHHHCCSCSSBCCHHHHHHHHHTTSCCCCHHHHHHHHTTS----SSCCBHHHHHHHHHHCCCSSCC
T ss_pred hhCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHc----cCCCcHHHHHHHHHHHhcCCCc
Confidence 457788899999999999999999999999999999999999999999999877 899999999998764 333455
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHcCC
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGN 510 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~~~ 510 (520)
...+..+|+.||.|++|+|+.+||+.+| .+|.. +++++..+|..+|.|+||.|+|+||+.+|....
T Consensus 125 ~~~l~~~F~~~D~d~~G~Is~~El~~~l-~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~ 191 (196)
T 3dtp_E 125 EDVIVNAFNLFDEGDGKCKEETLKRSLT-TWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQILTKGA 191 (196)
T ss_dssp HHHHHHHHHTTCSSSSCCBHHHHHHHHH-HSSSCCCHHHHHHHHHSSCEETTEECHHHHHHHHHSSCC
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCCHHHHHHHHHHcCCCCCCEEeHHHHHHHHHcCC
Confidence 7789999999999999999999999999 99987 889999999999999999999999999998743
|
| >2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei} | Back alignment and structure |
|---|
Probab=99.85 E-value=1e-21 Score=180.96 Aligned_cols=147 Identities=22% Similarity=0.356 Sum_probs=125.4
Q ss_pred HHHHhhhhHHHHhhHHHHhcccCCCCCCcccHHHHhh-hhhhcCCCCCHHHHHHHHHHh---------cCCCCCceehhh
Q 010013 361 KVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKA-GLPKLGTRLSESEVRQLMEAA---------DVDGNGTIDYIE 430 (520)
Q Consensus 361 ~~i~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~-~l~~~~~~~~~~~~~~~~~~~---------d~~~~g~i~~~e 430 (520)
..+...++++++.++.++|..+|.|++|.|+.+||.. ++..++..++..++..++..+ |.|++|.|+|+|
T Consensus 39 ~~l~~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~lg~~~~~~~~~~~~~~~f~~~~~~~~D~d~~G~I~~~E 118 (226)
T 2lvv_A 39 CAIPRDKDAESKSRRIELFKQFDTNGTGKLGFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNKVKGVGEEDLVE 118 (226)
T ss_dssp HHSCSSCCHHHHHHHHHHHHHHGGGSCSCBCSHHHHHHHHHTTCCTTTSSSCHHHHHHHHHHHHHHHHHHSCCCCCSCBC
T ss_pred HHhchhCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcccCCCCCCCCcCCHHH
Confidence 3345678999999999999999999999999999998 556678777766666666666 999999999999
Q ss_pred hHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhc---CCCCHHHHHHHHHHhcCCCCcceeHHHHHHHHH
Q 010013 431 FITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY---NMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507 (520)
Q Consensus 431 f~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~---~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~ 507 (520)
|+.++.........+.++.+|+.||.|++|+|+.+||+.++..+ +... .++..+|..+|.|+||.|+|+||+.+|.
T Consensus 119 F~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~g~~~-~e~~~~~~~~D~d~dG~Is~~EF~~~~~ 197 (226)
T 2lvv_A 119 FLEFRLMLCYIYDIFELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDI-TDATTVFNEIDTNGSGVVTFDEFSCWAV 197 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCSSCCEECHHHHHHHHHHHHHHTCCC-CSCHHHHHHHCCSCSSCEEHHHHHHHHH
T ss_pred HHHHHHHHHhccCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHHhhcCCCH-HHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence 99965444444556789999999999999999999999999887 6552 2489999999999999999999999997
Q ss_pred c
Q 010013 508 K 508 (520)
Q Consensus 508 ~ 508 (520)
.
T Consensus 198 ~ 198 (226)
T 2lvv_A 198 T 198 (226)
T ss_dssp H
T ss_pred h
Confidence 6
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=99.85 E-value=6.5e-21 Score=170.93 Aligned_cols=131 Identities=23% Similarity=0.376 Sum_probs=122.1
Q ss_pred HhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHH
Q 010013 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAF 451 (520)
Q Consensus 372 ~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F 451 (520)
.+++.++|..+|.|++|.|+.+||..++..++..++.++++.+|..+|.|++|.|+|+||+.++.. ...++.+|
T Consensus 26 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~------~~~~~~~F 99 (191)
T 1y1x_A 26 NQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHF------ILSMREGF 99 (191)
T ss_dssp TSCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH------HHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH------HHHHHHHH
Confidence 467899999999999999999999999988888899999999999999999999999999987753 35789999
Q ss_pred hhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 452 EYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 452 ~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
+.+|.|++|+|+.+||+.++..+|.. ++++++.+|..+|.|+||.|+|+||+.++..
T Consensus 100 ~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 157 (191)
T 1y1x_A 100 RKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIF 157 (191)
T ss_dssp HHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHhCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 99999999999999999999999887 8899999999999999999999999998864
|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A | Back alignment and structure |
|---|
Probab=99.85 E-value=7.2e-21 Score=167.62 Aligned_cols=133 Identities=24% Similarity=0.366 Sum_probs=121.7
Q ss_pred HHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcC-CCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHH
Q 010013 370 EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLG-TRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLY 448 (520)
Q Consensus 370 ~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~-~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~ 448 (520)
.+.+++.++|+.+|.|++|.|+.+||..++..++ ..++.++++.+|..+|.|++|.|+|+||+.++.. ...++
T Consensus 4 ~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~ef~~~~~~------~~~~~ 77 (172)
T 2znd_A 4 PDQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY------ITDWQ 77 (172)
T ss_dssp --CHHHHHHHHHHCTTCSSCEEHHHHHHHCCCSSSSCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHHH------HHHHH
T ss_pred cchhHHHHHHHHhCCCCCCcCcHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH------HHHHH
Confidence 3456799999999999999999999999999988 7789999999999999999999999999987653 35789
Q ss_pred HHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 449 KAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 449 ~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.+|+.+|.|++|+|+.+||+.++..+|.. +++++..+|..+|.|+||.|+|+||+.++..
T Consensus 78 ~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 138 (172)
T 2znd_A 78 NVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIV 138 (172)
T ss_dssp HHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHCCCCCCccCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 99999999999999999999999999887 8899999999999999999999999998764
|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A | Back alignment and structure |
|---|
Probab=99.85 E-value=3.7e-21 Score=169.71 Aligned_cols=146 Identities=21% Similarity=0.306 Sum_probs=125.8
Q ss_pred hHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcC----CCCCHHH-H--------HHHHHHhcCCCCCceehhhhHHH
Q 010013 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLG----TRLSESE-V--------RQLMEAADVDGNGTIDYIEFITA 434 (520)
Q Consensus 368 ~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~----~~~~~~~-~--------~~~~~~~d~~~~g~i~~~ef~~~ 434 (520)
++++++++.++|+.+|.|++|.|+.+||..++..++ ..++..+ + +.+|..+| ++|.|+|+||+.+
T Consensus 1 s~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~D--~~g~i~~~EF~~~ 78 (174)
T 1q80_A 1 SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFINS 78 (174)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEESHHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHhcC--CCCeEcHHHHHHH
Confidence 357788999999999999999999999999999988 8888877 6 45788888 8999999999998
Q ss_pred hhccch-----hhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcceeHHHHHHHHHc-
Q 010013 435 TMHMNR-----VEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK- 508 (520)
Q Consensus 435 ~~~~~~-----~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~- 508 (520)
+..... ......++.+|+.+|.|++|+|+.+||+.++..+|. ++++++.+|..+|.|+||.|+|+||+.+|..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~-~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~ 157 (174)
T 1q80_A 79 MKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGL-DKTMAPASFDAIDTNNDGLLSLEEFVIAGSDF 157 (174)
T ss_dssp HHHHTTSTTCHHHHHTHHHHHHHHHCTTSSSSBCHHHHHHHHHHHTC-CGGGHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHcCcccHHHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHcCC-CHHHHHHHHHHhCCCCCceEeHHHHHHHHHHH
Confidence 765433 234577999999999999999999999999998874 5678999999999999999999999998865
Q ss_pred --CCCCCCCC
Q 010013 509 --GNPDMVGN 516 (520)
Q Consensus 509 --~~~~~~~~ 516 (520)
.+|+.+++
T Consensus 158 ~~~~~~~~g~ 167 (174)
T 1q80_A 158 FMNDGDSTNK 167 (174)
T ss_dssp HHCCCCSSTT
T ss_pred hccCcccCCC
Confidence 45666665
|
| >2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.85 E-value=2.2e-21 Score=172.85 Aligned_cols=141 Identities=12% Similarity=0.273 Sum_probs=124.6
Q ss_pred hhHHHHhhHHHHhccc-CCCCCCcccHHHHhhhhhhcC----CCCCHHHHHHH-----------HHHhcCCCCCceehhh
Q 010013 367 LSEEEIMGLKEMFKSM-DTDNSGTITFEELKAGLPKLG----TRLSESEVRQL-----------MEAADVDGNGTIDYIE 430 (520)
Q Consensus 367 ~~~~~~~~l~~~F~~~-D~~~~g~i~~~e~~~~l~~~~----~~~~~~~~~~~-----------~~~~d~~~~g~i~~~e 430 (520)
+++++++++.++|+.+ |.|++|.|+.+||..++..++ ..++..++..+ |..+|.|++|.|+++|
T Consensus 2 ls~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~E 81 (185)
T 2sas_A 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEE 81 (185)
T ss_dssp CCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHH
T ss_pred cCHHHHHHHHHHHHHheeCCCCCeEcHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHH
Confidence 4677889999999999 999999999999999999888 78888888755 9999999999999999
Q ss_pred hHHHhhccch---------hhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcceeHHH
Q 010013 431 FITATMHMNR---------VEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEE 501 (520)
Q Consensus 431 f~~~~~~~~~---------~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i~~~e 501 (520)
|+.++..... ......++.+|+.+|.|++|+|+.+||..++..+|. +++++..+|..+|.|+||.|+|+|
T Consensus 82 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g~-~~~~~~~~~~~~D~d~dG~i~~~e 160 (185)
T 2sas_A 82 YLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQL-QCADVPAVYNVITDGGKVTFDLNR 160 (185)
T ss_dssp HHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCC-CCSSHHHHHHHHHTTTTSCCSHHH
T ss_pred HHHHHHHHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhCC-CHHHHHHHHHHhcCCCCCcCcHHH
Confidence 9987754321 124578999999999999999999999999998874 456799999999999999999999
Q ss_pred HHHHHHc
Q 010013 502 FAAMMRK 508 (520)
Q Consensus 502 f~~~l~~ 508 (520)
|+.++..
T Consensus 161 f~~~~~~ 167 (185)
T 2sas_A 161 YKELYYR 167 (185)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999876
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A | Back alignment and structure |
|---|
Probab=99.85 E-value=9.2e-21 Score=165.67 Aligned_cols=137 Identities=22% Similarity=0.339 Sum_probs=118.7
Q ss_pred HHhhHHHHhcccCCCCCCcccHHHHhhhh----hhcCCCCCHHHHHHH-----------HHHhcCCCCCceehhhhHHHh
Q 010013 371 EIMGLKEMFKSMDTDNSGTITFEELKAGL----PKLGTRLSESEVRQL-----------MEAADVDGNGTIDYIEFITAT 435 (520)
Q Consensus 371 ~~~~l~~~F~~~D~~~~g~i~~~e~~~~l----~~~~~~~~~~~~~~~-----------~~~~d~~~~g~i~~~ef~~~~ 435 (520)
+++++.++|..+|.|++|.|+.+||..++ ..+|..++..++..+ |..+|.|++|.|+++||+.++
T Consensus 2 ~~~~l~~~F~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~ 81 (166)
T 3akb_A 2 YERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREEFVTGA 81 (166)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSSSCEEHHHHHHTH
T ss_pred HHHHHHHHHhHHcCCCCCCcCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 35678999999999999999999999975 456888888777644 799999999999999999877
Q ss_pred hccchhh-------hHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 436 MHMNRVE-------REEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 436 ~~~~~~~-------~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
....... ....++.+|+.+|.|++|+|+.+||+.++..+| .+++++..+|..+|.|+||.|+|+||+.+|..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~-~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~ 160 (166)
T 3akb_A 82 VKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG-VPEDLARQAAAALDTDGDGKVGETEIVPAFAR 160 (166)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHTT-CCHHHHHHHHHHHCTTCSSBCCHHHHHHHHHH
T ss_pred HHHhccCccchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC-CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 6432221 134589999999999999999999999999998 67889999999999999999999999999975
|
| >1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A | Back alignment and structure |
|---|
Probab=99.85 E-value=5.4e-21 Score=160.64 Aligned_cols=130 Identities=28% Similarity=0.429 Sum_probs=116.5
Q ss_pred hHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhh---ccchhhhHHHHHHH
Q 010013 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM---HMNRVEREEHLYKA 450 (520)
Q Consensus 374 ~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~---~~~~~~~~~~~~~~ 450 (520)
++.++|..+|.|++|.|+.+||..++..++..++.+++..+|..+|.+++|.|+++||..++. ..........++.+
T Consensus 1 ~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~ 80 (134)
T 1jfj_A 1 MAEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVL 80 (134)
T ss_dssp CHHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHHHHHHH
Confidence 367899999999999999999999999999989999999999999999999999999999885 23333455669999
Q ss_pred HhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcceeHHHHHHHH
Q 010013 451 FEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMM 506 (520)
Q Consensus 451 F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~l 506 (520)
|+.+|.|++|.|+.+||+.++..++.. . +..+|..+|.|+||.|+|+||+.+|
T Consensus 81 f~~~D~d~~G~i~~~e~~~~l~~~~~~--~-~~~~~~~~D~~~dg~i~~~ef~~~l 133 (134)
T 1jfj_A 81 YKLMDVDGDGKLTKEEVTSFFKKHGIE--K-VAEQVMKADANGDGYITLEEFLEFS 133 (134)
T ss_dssp HHHHCCSSSSEEEHHHHHHHHTTTTCH--H-HHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred HHHHCCCCCCccCHHHHHHHHHHhCHH--H-HHHHHHHhCCCCCCcEeHHHHHHHh
Confidence 999999999999999999999877642 2 8999999999999999999999876
|
| >1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.84 E-value=3e-21 Score=163.83 Aligned_cols=133 Identities=23% Similarity=0.378 Sum_probs=119.9
Q ss_pred HHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccch---hhhHHHH
Q 010013 371 EIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNR---VEREEHL 447 (520)
Q Consensus 371 ~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~---~~~~~~~ 447 (520)
+++++.++|..+|.|++|.|+.+||..++..+|..++.+++..++. +++|.|+|+||+.++..... ......+
T Consensus 3 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~ 78 (140)
T 1ggw_A 3 DDSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIES----TLPAEVDMEQFLQVLNRPNGFDMPGDPEEF 78 (140)
T ss_dssp CCTTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHHHHT----TSCSSEEHHHHHHHHCTTSSSSSSCCHHHH
T ss_pred hHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHh----CCCCcCcHHHHHHHHHHHhcccCcccHHHH
Confidence 3567899999999999999999999999999999999999998887 88999999999998765432 1234789
Q ss_pred HHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 448 YKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 448 ~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
+.+|+.+|.|++|+|+.+||+.++..+|.. +++++..+|..+|. +||.|+|+||+.+|.+
T Consensus 79 ~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~-~dg~i~~~eF~~~~~~ 139 (140)
T 1ggw_A 79 VKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPV-KDGMVNYHDFVQMILA 139 (140)
T ss_dssp HHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTC-SSCCSTTTHHHHHHHC
T ss_pred HHHHHHhCCCCCCcEeHHHHHHHHHHcCCCCCHHHHHHHHHhccC-CCCcEeHHHHHHHHhc
Confidence 999999999999999999999999999887 88999999999999 9999999999999875
|
| >3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.2e-21 Score=179.72 Aligned_cols=146 Identities=23% Similarity=0.398 Sum_probs=124.5
Q ss_pred HHhhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhh-cCCCCCHHHHHHHHHHh---------cCCCCCceehhhhH
Q 010013 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPK-LGTRLSESEVRQLMEAA---------DVDGNGTIDYIEFI 432 (520)
Q Consensus 363 i~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~~---------d~~~~g~i~~~ef~ 432 (520)
+...++++++.++.++|..+|.|++|.|+.+||..++.. +|..++.+++..++..+ +.|++|.|+|.||+
T Consensus 38 ~~~~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~I~~~EF~ 117 (219)
T 3cs1_A 38 IPREKTAEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEFL 117 (219)
T ss_dssp SCCSSSHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCGGGTCSCHHHHHHHHHHHHHHHHHHHHTSCCCSSBCHH
T ss_pred hcccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhhhhccCCCCcCCHHHHH
Confidence 446688999999999999999999999999999999987 78777666665554432 34889999999999
Q ss_pred HHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCC-C-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 433 TATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNM-G-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~-~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.++.........+.++.+|+.||.|++|+|+.+||+.++..+|. . ++++++.+|..+|.|+||.|+|+||+.+|..
T Consensus 118 ~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~~ 195 (219)
T 3cs1_A 118 EFRLMLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGSVTFDEFAAWASA 195 (219)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHHHHHTCCCSCHHHHHHHHCTTSSSEEEHHHHHHHHHH
T ss_pred HHHHHHhccchHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhcccCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 87654444455678999999999999999999999999998875 3 6667999999999999999999999999976
|
| >3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1.3e-20 Score=186.91 Aligned_cols=144 Identities=41% Similarity=0.708 Sum_probs=129.8
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc-chhhh
Q 010013 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM-NRVER 443 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~-~~~~~ 443 (520)
..+++++++++.++|+.+|.|++|.|+.+||..+|..++..++.++++.+|..+|.|++|.|+|+||+.++... .....
T Consensus 304 ~~ls~eei~el~~~F~~fD~D~dG~Is~~EL~~~L~~lg~~~s~eel~~Lf~~~D~DgdG~IsfeEFl~ll~~~~~~~~~ 383 (450)
T 3sg6_A 304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 383 (450)
T ss_dssp -CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTSSSSEEHHHHHHHHHC------C
T ss_pred ccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcccHHHHHHHHHhhccccch
Confidence 45677888999999999999999999999999999999999999999999999999999999999999987643 23345
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.+.++.+|+.+|.|++|+|+.+||+.+|..+|.. ++++++.+|..+|.|+||.|+|+||+.+|..
T Consensus 384 ~e~l~~aFk~fD~D~dG~Is~eELr~~L~~lG~~ls~eei~~Lf~~~D~D~DG~IsfdEFv~~L~~ 449 (450)
T 3sg6_A 384 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 449 (450)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTSSSSEEHHHHHHHHC-
T ss_pred hhHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence 6789999999999999999999999999999987 8899999999999999999999999999864
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=3.5e-21 Score=181.14 Aligned_cols=141 Identities=13% Similarity=0.106 Sum_probs=107.7
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcE--EEEEEecccccCCc---------------------ccHHHHHHHHHHHHhc
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQ--FACKSISSRKLINR---------------------DDVEDVRREVQIMHHL 124 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~--~avK~~~~~~~~~~---------------------~~~~~~~~e~~~l~~l 124 (520)
.|.+.+.||+|+||.||+|.+..+|+. ||||++........ .....+.+|+.+|.++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 477889999999999999999777888 99998754311100 1123678999999999
Q ss_pred cCCCCe--eEEEEEEEeCCeEEEEEeccCC-C----chHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HcCCeeecCCC
Q 010013 125 TGHRNI--VELKGAYEDRHSVNLIMDLCAG-G----ELFDRIIAKGHYSERAAANLCRQMVTVVHYCH-SMGVMHRDLKP 196 (520)
Q Consensus 125 ~~hp~i--v~l~~~~~~~~~~~lv~e~~~g-~----~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH-~~~ivH~Dlkp 196 (520)
. |+++ +.++++ ...++||||+.+ | +|.+.... .++..+..++.||+.||.||| +.||+||||||
T Consensus 128 ~-~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp 199 (258)
T 1zth_A 128 K-EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE---LKELDVEGIFNDVVENVKRLYQEAELVHADLSE 199 (258)
T ss_dssp H-HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG---GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCST
T ss_pred H-hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc---cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCH
Confidence 8 7653 445443 246799999942 3 66554332 235567889999999999999 99999999999
Q ss_pred CcEEeecCCCCCCeeEeeccccccc
Q 010013 197 ENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 197 ~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
+|||++ . .++|+|||+|...
T Consensus 200 ~NILl~---~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 200 YNIMYI---D--KVYFIDMGQAVTL 219 (258)
T ss_dssp TSEEES---S--SEEECCCTTCEET
T ss_pred HHEEEc---C--cEEEEECcccccC
Confidence 999995 2 7999999999864
|
| >1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.6e-20 Score=170.26 Aligned_cols=140 Identities=26% Similarity=0.411 Sum_probs=125.0
Q ss_pred HHHHhhHHHHhcccCCC-CCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHH
Q 010013 369 EEEIMGLKEMFKSMDTD-NSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHL 447 (520)
Q Consensus 369 ~~~~~~l~~~F~~~D~~-~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~ 447 (520)
.-..+++.++|..+|.+ ++|.|+.+||..++..++...+.++++.+|..+|.|++|.|+|+||+.++.........+.+
T Consensus 18 ~~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~ 97 (204)
T 1jba_A 18 AADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKL 97 (204)
T ss_dssp HHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHH
T ss_pred CCCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHhcCCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccCCHHHHH
Confidence 44556678899999999 89999999999999999988889999999999999999999999999988765555667789
Q ss_pred HHHHhhhcCCCCCceeHHHHHHHHHhc----C-------------C-CCHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 448 YKAFEYFDKDNSGYITMEELEHALKKY----N-------------M-GDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 448 ~~~F~~~D~d~dG~I~~~El~~~l~~~----~-------------~-~~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
+.+|+.+|.|++|+|+.+||..++..+ | . ..++++..+|..+|.|+||.|+|+||+.++.+
T Consensus 98 ~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~ 176 (204)
T 1jba_A 98 KWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARR 176 (204)
T ss_dssp HHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHHHHTT
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCccccccccCchhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHc
Confidence 999999999999999999999999876 2 1 24567999999999999999999999999976
|
| >2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1.3e-20 Score=171.39 Aligned_cols=140 Identities=24% Similarity=0.419 Sum_probs=122.3
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccch---h
Q 010013 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNR---V 441 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~---~ 441 (520)
..+++++++++.++|..+|.|++|+|+.+||..++ .++..+.. +.++..+|.+++|.|+|+||+.++..... .
T Consensus 21 ~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~~-~lg~~~~~---~~l~~~~d~~~~g~i~~~EF~~~~~~~~~~~~~ 96 (208)
T 2ct9_A 21 TGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIP-ELAINPLG---DRIINAFFSEGEDQVNFRGFMRTLAHFRPIEDN 96 (208)
T ss_dssp HCCCHHHHHHHHHHHHHHCTTCSSEECTGGGGGCH-HHHTSTTH---HHHHHTTSCTTCSCEEHHHHHHHHHTTSCCC--
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCcH---HHHHHHHcCCCCCcCcHHHHHHHHHhhccccch
Confidence 46889999999999999999999999999999965 67766654 46788999999999999999998764321 1
Q ss_pred -------------hhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhc-CCC-CHHHHHHH----HHHhcCCCCcceeHHHH
Q 010013 442 -------------EREEHLYKAFEYFDKDNSGYITMEELEHALKKY-NMG-DAKTIKEI----IAEVDIDNDGRINYEEF 502 (520)
Q Consensus 442 -------------~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~-~~~-~~~~~~~~----~~~~d~~~dg~i~~~ef 502 (520)
...+.++.+|+.||.|++|+|+.+||+.++..+ |.. ++++++.+ |..+|.|+||.|+|+||
T Consensus 97 ~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~s~~~~~~l~~~~~~~~D~d~dG~Is~~EF 176 (208)
T 2ct9_A 97 EKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEF 176 (208)
T ss_dssp ---------CCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHCSSSSSSEEHHHH
T ss_pred hhhcccccccccccHHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHH
Confidence 256789999999999999999999999999986 876 78888777 99999999999999999
Q ss_pred HHHHHc
Q 010013 503 AAMMRK 508 (520)
Q Consensus 503 ~~~l~~ 508 (520)
+.++..
T Consensus 177 ~~~~~~ 182 (208)
T 2ct9_A 177 VKVLEK 182 (208)
T ss_dssp HHTTTT
T ss_pred HHHHhc
Confidence 999876
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A | Back alignment and structure |
|---|
Probab=99.83 E-value=2.8e-22 Score=194.09 Aligned_cols=201 Identities=20% Similarity=0.361 Sum_probs=150.3
Q ss_pred CCCHHHHHHHHHhc---ccCCCCCCCHHHHHcC------CccccCCCCC-------------------C----CcccHHH
Q 010013 295 NISSSAKDIVKKML---HADPKERLSAAEVLNH------PWMRVDGDAS-------------------D----KPLDIAV 342 (520)
Q Consensus 295 ~~~~~~~~li~~~l---~~dp~~Rps~~~~l~~------~~~~~~~~~~-------------------~----~~~~~~~ 342 (520)
.+.+++.+|.+++. ..+|++|.+.++.+.| +|+....+.. . +.....+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~a~g~~~~e~q~~~~v 95 (323)
T 1ij5_A 16 KVHENLEELQKKLDHTSFAHKEDRDRLEAQIAQKEQEQKAKLAEYDQKVQNEFDARERAEREREAARGDAAAEKQRLASL 95 (323)
T ss_dssp HHHHHHHHHHHHHTTCCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhhhHHHHHHHHhhcCCCCCcchhhHHH
Confidence 44577888988887 8899999999999988 7776442111 0 0001112
Q ss_pred HHHHH-HHHhhhHHHHHHHHHHHhhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCC
Q 010013 343 LTRMK-QFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVD 421 (520)
Q Consensus 343 ~~~~~-~~~~~~~l~~~~~~~i~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~ 421 (520)
+.+++ +|..++.+++ ++..++++++..+..+|..+|.|++|.|+.+||..+|..+|..++..++..+|..+|.|
T Consensus 96 l~~l~~~f~~~~~lkk-----~~~~Ls~~e~~~l~~~F~~~D~d~dG~Is~~El~~~L~~lg~~~~~~~i~~l~~~~D~d 170 (323)
T 1ij5_A 96 LKDLEDDASGYNRLRP-----SKPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVEND 170 (323)
T ss_dssp HHHC------------------CCCCCHHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHHHHHTTSCSSHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhhhHHH-----HHHhCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCC
Confidence 33333 3434444443 34678999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHH-HHHHhcCCCCcceeH
Q 010013 422 GNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKE-IIAEVDIDNDGRINY 499 (520)
Q Consensus 422 ~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~-~~~~~d~~~dg~i~~ 499 (520)
++|.|+|.+|..++ .....+..+|+.||.|++|+|+.+||..++ +|.. +..++.. +|..+|.|+||.|+|
T Consensus 171 ~~G~I~f~ef~~l~------~~~~~l~~~F~~~D~d~dG~Is~~El~~~l--~g~~~~~~ei~~~l~~~~D~d~dG~Is~ 242 (323)
T 1ij5_A 171 TKGRMSYITLVAVA------NDLAALVADFRKIDTNSNGTLSRKEFREHF--VRLGFDKKSVQDALFRYADEDESDDVGF 242 (323)
T ss_dssp CSSTHHHHHHTTSH------HHHHTSCCCHHHHCTTCCSEECHHHHHHHH--HHTTCCCHHHHHHHHHHHCTTCSSCEEH
T ss_pred CCCcCcHHHHHhhh------hHHHHHHHHHHHHCCCCCCcCcHHHHHHHH--cCCCCCHHHHHHHHHHHhcCCCCCEEeH
Confidence 99999999997653 334567789999999999999999999998 5655 6678999 999999999999999
Q ss_pred HHHHHHHHc
Q 010013 500 EEFAAMMRK 508 (520)
Q Consensus 500 ~ef~~~l~~ 508 (520)
+||+.++..
T Consensus 243 ~EF~~~l~~ 251 (323)
T 1ij5_A 243 SEYVHLGLC 251 (323)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999988753
|
| >2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A | Back alignment and structure |
|---|
Probab=99.83 E-value=2.9e-20 Score=158.96 Aligned_cols=134 Identities=17% Similarity=0.321 Sum_probs=122.4
Q ss_pred hHHHHhhHHHHhcccCCCC-CCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhc-cchhhhHH
Q 010013 368 SEEEIMGLKEMFKSMDTDN-SGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH-MNRVEREE 445 (520)
Q Consensus 368 ~~~~~~~l~~~F~~~D~~~-~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~-~~~~~~~~ 445 (520)
.-+++.++.++|..+|.|+ +|.|+.+||..++..+|..++..++..++..+|.+ |+|+||+.++.. ........
T Consensus 9 ~~~~~~~l~~~F~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~----i~~~eF~~~~~~~~~~~~~~~ 84 (146)
T 2qac_A 9 QLEEKVDESDVRIYFNEKSSGGKISIDNASYNARKLGLAPSSIDEKKIKELYGDN----LTYEQYLEYLSICVHDKDNVE 84 (146)
T ss_dssp HHHHHSCHHHHHHHHHHHCBTTBEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSE----ECHHHHHHHHHHTCCTTCCHH
T ss_pred HHHHHHHHHHHHHHhCccCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCC----CCHHHHHHHHHHHhcCcchHH
Confidence 4467788999999999999 99999999999999999999999999999999887 999999998764 33344577
Q ss_pred HHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHH
Q 010013 446 HLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507 (520)
Q Consensus 446 ~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~ 507 (520)
.++.+|+.||.|++|+|+.+||+.++..+|.. +++++..+|..+ |+||.|+|+||+.+|.
T Consensus 85 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~l~ 145 (146)
T 2qac_A 85 ELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAIDALNAF--SSEDNIDYKLFCEDIL 145 (146)
T ss_dssp HHHHHHHTTCTTCSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHH--CSSSEEEHHHHHHHHT
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHc--CCCCcCcHHHHHHHHh
Confidence 89999999999999999999999999999987 889999999999 9999999999999885
|
| >1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A | Back alignment and structure |
|---|
Probab=99.83 E-value=1.7e-20 Score=165.40 Aligned_cols=130 Identities=20% Similarity=0.346 Sum_probs=120.2
Q ss_pred HHhhHHHHhcccCCCCCCcccHHHHhhhhhhc-C-------CCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhh
Q 010013 371 EIMGLKEMFKSMDTDNSGTITFEELKAGLPKL-G-------TRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVE 442 (520)
Q Consensus 371 ~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~-~-------~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~ 442 (520)
+++++.++|..+| |++|.|+.+||..++..+ | ..++.++++.+|..+|.|++|.|+|+||+.++..
T Consensus 2 ~~~~l~~~F~~~D-d~~G~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~----- 75 (173)
T 1alv_A 2 EVRQFRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNN----- 75 (173)
T ss_dssp HHHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH-----
T ss_pred chhHHHHHHHHHh-CCCCCcCHHHHHHHHHHhhhcccccccCCCCHHHHHHHHHHHcCCCCCccCHHHHHHHHHH-----
Confidence 5678999999999 999999999999999997 6 6788999999999999999999999999987753
Q ss_pred hHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 443 REEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 443 ~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
...++.+|+.+|.|++|+|+.+||+.++..+|.. ++++++.++..+| |+||.|+|+||+.++..
T Consensus 76 -~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dg~i~~~eF~~~~~~ 140 (173)
T 1alv_A 76 -IKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYS-DEGGNMDFDNFISCLVR 140 (173)
T ss_dssp -HHHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHHHHT-CSSSCBCHHHHHHHHHH
T ss_pred -HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHH
Confidence 3578999999999999999999999999999987 8899999999999 99999999999998864
|
| >2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} | Back alignment and structure |
|---|
Probab=99.83 E-value=3.5e-20 Score=167.22 Aligned_cols=141 Identities=25% Similarity=0.373 Sum_probs=122.6
Q ss_pred hHHHHhhHHHHhcccCCC-CCCcccHHHHhhhhhhcCCCCCH-HHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHH
Q 010013 368 SEEEIMGLKEMFKSMDTD-NSGTITFEELKAGLPKLGTRLSE-SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREE 445 (520)
Q Consensus 368 ~~~~~~~l~~~F~~~D~~-~~g~i~~~e~~~~l~~~~~~~~~-~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~ 445 (520)
+.-..+++.++|..||.+ ++|.|+.+||..++..++..+.. ++++.+|..+|.|++|.|++.||+.++.........+
T Consensus 9 t~~~~~el~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~ 88 (198)
T 2r2i_A 9 EELSATECHQWYKKFMTECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQ 88 (198)
T ss_dssp HHHHTSCHHHHHHHHHHHCTTSEECHHHHHHHHTCCSCCHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSSCCHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHccCchHH
Confidence 334445678899999998 89999999999999998876554 4599999999999999999999999887665556778
Q ss_pred HHHHHHhhhcCCCCCceeHHHHHHHHHhcC------CC-C-HHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 446 HLYKAFEYFDKDNSGYITMEELEHALKKYN------MG-D-AKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 446 ~~~~~F~~~D~d~dG~I~~~El~~~l~~~~------~~-~-~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.++.+|+.||.|++|+|+.+||..++..++ .. + ++.+..+|..+|.|+||.|+|+||+.++..
T Consensus 89 ~~~~~F~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~ 159 (198)
T 2r2i_A 89 KLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQK 159 (198)
T ss_dssp HHHHHHHHHCTTCSSCEEHHHHHHHHHHTTGGGGSSSCCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHc
Confidence 899999999999999999999999999875 23 4 345899999999999999999999999875
|
| >3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=99.82 E-value=5e-20 Score=162.87 Aligned_cols=146 Identities=16% Similarity=0.238 Sum_probs=122.6
Q ss_pred HHHHHHhhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhc---CCCCCceehhhhHHHh
Q 010013 359 ALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAAD---VDGNGTIDYIEFITAT 435 (520)
Q Consensus 359 ~~~~i~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d---~~~~g~i~~~ef~~~~ 435 (520)
.+.++....+..++.++.+.|..+| ++|.|+.+||..++ |..++.+++..+|..+| .+++|.|+|.||..++
T Consensus 14 ~l~~~~~~~~~~~~~~~~~~F~~~D--~dG~I~~~el~~~l---g~~~~~~~~~~i~~~~d~~~~~~~~~i~~~ef~~~~ 88 (179)
T 3a8r_A 14 GLQFVTAKVGNDGWAAVEKRFNQLQ--VDGVLLRSRFGKCI---GMDGSDEFAVQMFDSLARKRGIVKQVLTKDELKDFY 88 (179)
T ss_dssp HHHHHHHHHCCCCHHHHHHHHHHHC--BTTBEEGGGHHHHH---TCCSCHHHHHHHHHHHHHHHTCCSSEECHHHHHHHH
T ss_pred HHHHHHhccchhhHHHHHHHHhccC--CCCCCcHHHHHHHH---CCCCcHHHHHHHHHHHHHhccCCCCCcCHHHHHHHH
Confidence 3445566555567888999999999 89999999999864 66778888999999887 5678999999999876
Q ss_pred hccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHH-hcCCC--------CHHHHHHHHHHhcCCCCcceeHHHHHHHH
Q 010013 436 MHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALK-KYNMG--------DAKTIKEIIAEVDIDNDGRINYEEFAAMM 506 (520)
Q Consensus 436 ~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~-~~~~~--------~~~~~~~~~~~~d~~~dg~i~~~ef~~~l 506 (520)
.........+.++.+|+.||.|+||+|+.+||+.++. .+|.. ++++++.+|..+|.|+||.|+|+||+.++
T Consensus 89 ~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~ 168 (179)
T 3a8r_A 89 EQLTDQGFDNRLRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELDPTNLGYIEMEDLEALL 168 (179)
T ss_dssp HHHHCCCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSTTCCSEECHHHHHHHH
T ss_pred HHHcCCCHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccccccccccchHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 5443334567899999999999999999999999998 77764 66789999999999999999999999999
Q ss_pred HcC
Q 010013 507 RKG 509 (520)
Q Consensus 507 ~~~ 509 (520)
...
T Consensus 169 ~~~ 171 (179)
T 3a8r_A 169 LQS 171 (179)
T ss_dssp C--
T ss_pred HhC
Confidence 864
|
| >1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E | Back alignment and structure |
|---|
Probab=99.82 E-value=8.2e-20 Score=162.53 Aligned_cols=142 Identities=23% Similarity=0.341 Sum_probs=122.9
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCC-CCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhh
Q 010013 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTR-LSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVER 443 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~-~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~ 443 (520)
..++.+++.++.+.|..+ |++|.|+.+||..++..++.. .+..+++.+|..+|.|++|.|+++||+.++........
T Consensus 13 ~~~s~~~i~~l~~~fd~~--d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~ 90 (183)
T 1s6c_A 13 TNFTKRELQVLYRGFKNE--XPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTV 90 (183)
T ss_dssp SSCCHHHHHHHHHHHHHH--CTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCH
T ss_pred cCCCHHHHHHHHHHHHHh--CCCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHcCCCH
Confidence 457777777666666654 789999999999999998865 78899999999999999999999999998876655567
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHhc----CCC---------CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKY----NMG---------DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~----~~~---------~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.+.++.+|+.+|.|++|+|+.+||..++..+ |.. ..+++.++|..+|.|+||.|+|+||+.++..
T Consensus 91 ~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~~~ 168 (183)
T 1s6c_A 91 HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQE 168 (183)
T ss_dssp HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHHHHHTTS
T ss_pred HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence 7889999999999999999999999999876 531 2478999999999999999999999999876
|
| >2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.3e-19 Score=164.66 Aligned_cols=143 Identities=24% Similarity=0.416 Sum_probs=122.4
Q ss_pred hhhhHHHHhhHHHHhcccCCC--CCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccch-h
Q 010013 365 ENLSEEEIMGLKEMFKSMDTD--NSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNR-V 441 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D~~--~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~-~ 441 (520)
..++.+++.++.++|..+|.| ++|.|+.+||..++.. .....+..++.+|..+|.|++|.|+|+||+.++..... .
T Consensus 29 ~~~s~~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~ 107 (207)
T 2ehb_A 29 TPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFR-NRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSA 107 (207)
T ss_dssp SSCCHHHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHS-CTTCCCHHHHHHHHHHCTTCSSEECHHHHHHHHGGGSTTS
T ss_pred CCCCHHHHHHHHHHHHHhccccCCCCccCHHHHHHHHhc-cccccHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHccCC
Confidence 368899999999999999999 9999999999999976 33334456788999999999999999999998876542 3
Q ss_pred hhHHHHHHHHhhhcCCCCCceeHHHHHHHHH----hcCCC-CHHHH----HHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 442 EREEHLYKAFEYFDKDNSGYITMEELEHALK----KYNMG-DAKTI----KEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 442 ~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~----~~~~~-~~~~~----~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
...+.++.+|+.+|.|++|+|+.+||..++. ..|.. +++++ ..+|..+|.|+||.|+|+||+.++..
T Consensus 108 ~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~ 183 (207)
T 2ehb_A 108 PVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSL 183 (207)
T ss_dssp CHHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHcccccCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 5577899999999999999999999999985 44665 66655 55567999999999999999999987
|
| >2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A | Back alignment and structure |
|---|
Probab=99.82 E-value=4.8e-21 Score=171.03 Aligned_cols=143 Identities=13% Similarity=0.250 Sum_probs=123.0
Q ss_pred HhhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhc------CCCCCHHHHHHH---------HHHhcCCCCCceeh
Q 010013 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL------GTRLSESEVRQL---------MEAADVDGNGTIDY 428 (520)
Q Consensus 364 ~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~------~~~~~~~~~~~~---------~~~~d~~~~g~i~~ 428 (520)
...+++++++++.++|..+|.|++|.|+.+||..++..+ |..++.+++..+ |..+|.|++|.|+|
T Consensus 5 ~~~l~~~~~~~l~~~F~~~D~d~dG~i~~~El~~~l~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~f~~~D~d~dg~I~~ 84 (186)
T 2hps_A 5 TESERAYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRISVEEAAVN 84 (186)
T ss_dssp CHHHHHHHHHHHHHHHHTTCTTCSSEEEHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCCTTCEEEHHHHHHH
T ss_pred cccccHHHHHHHHHHhhhcCCCCCCccCHHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCCcccH
Confidence 456788899999999999999999999999999999876 777788888888 59999999999999
Q ss_pred hhhHHHhhccc-hhhhHHHHHHHH--hhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHH
Q 010013 429 IEFITATMHMN-RVEREEHLYKAF--EYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAA 504 (520)
Q Consensus 429 ~ef~~~~~~~~-~~~~~~~~~~~F--~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~ 504 (520)
+| .++.... .....+.+..+| +.||.|++|+|+.+||+.++..+|.. +++++..+|..+|.|+||.|+|+||+.
T Consensus 85 ~E--~~~~~~~~~~~~~~~~~~~f~~~~fD~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~ef~~ 162 (186)
T 2hps_A 85 AT--DSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLV 162 (186)
T ss_dssp HH--HHHHHCCTHHHHHTTHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCTTCSSEEEHHHHHH
T ss_pred HH--HHHHHhcCChHHHHHHHHHHHHHHccCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHH
Confidence 99 4443332 222334556666 88899999999999999999999876 889999999999999999999999999
Q ss_pred HHHc
Q 010013 505 MMRK 508 (520)
Q Consensus 505 ~l~~ 508 (520)
++..
T Consensus 163 ~~~~ 166 (186)
T 2hps_A 163 TVND 166 (186)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9976
|
| >2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.2e-19 Score=167.17 Aligned_cols=143 Identities=23% Similarity=0.412 Sum_probs=122.6
Q ss_pred hhhhHHHHhhHHHHhcccCCC--CCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccc-hh
Q 010013 365 ENLSEEEIMGLKEMFKSMDTD--NSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN-RV 441 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D~~--~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~-~~ 441 (520)
..++.+++.++.++|..+|.| ++|.|+.+||..++.. .....+..++.+|..+|.|++|.|+|+||+.++.... ..
T Consensus 40 ~~ls~~ei~~l~~~F~~~D~d~~~~G~I~~~El~~~l~~-~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~ 118 (226)
T 2zfd_A 40 TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK-TNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNA 118 (226)
T ss_dssp SSCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHS-CSSCCCHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTS
T ss_pred CCCCHHHHHHHHHHHHHhCcccCCCCeEcHHHHHHHHhc-cCcccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHccCC
Confidence 368999999999999999999 9999999999999976 3333445678899999999999999999999877544 33
Q ss_pred hhHHHHHHHHhhhcCCCCCceeHHHHHHHHH----hcCCC-CHHHH----HHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 442 EREEHLYKAFEYFDKDNSGYITMEELEHALK----KYNMG-DAKTI----KEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 442 ~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~----~~~~~-~~~~~----~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
...+.++.+|+.+|.|++|+|+.+||..++. ..|.. +++++ ..+|..+|.|+||.|+|+||+.++..
T Consensus 119 ~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~EF~~~~~~ 194 (226)
T 2zfd_A 119 PIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLR 194 (226)
T ss_dssp CHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 5577899999999999999999999999995 56666 66665 45566999999999999999999986
|
| >2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.82 E-value=4.2e-20 Score=168.40 Aligned_cols=137 Identities=26% Similarity=0.393 Sum_probs=116.8
Q ss_pred HhhHHHHhcccCCC-CCCcccHHHHhhhhhhcCCCCCH-HHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHH
Q 010013 372 IMGLKEMFKSMDTD-NSGTITFEELKAGLPKLGTRLSE-SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYK 449 (520)
Q Consensus 372 ~~~l~~~F~~~D~~-~~g~i~~~e~~~~l~~~~~~~~~-~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~ 449 (520)
.+++.++|+.||.+ ++|.|+.+||..++..++..+.. ++++.+|..+|.|++|.|+|+||+.++.........+.++.
T Consensus 18 ~~ei~~~f~~fD~~~~~G~is~~El~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~l~~ 97 (211)
T 2ggz_A 18 TQETHVWYRTFMMEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKW 97 (211)
T ss_dssp ------CCCSHHHHCTTSEEEHHHHHHHTTCCSCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSCSSHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhccCchHHHHHH
Confidence 34568899999998 89999999999999998876543 56999999999999999999999998876555566788999
Q ss_pred HHhhhcCCCCCceeHHHHHHHHHhcC-----CC-CH-HHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 450 AFEYFDKDNSGYITMEELEHALKKYN-----MG-DA-KTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 450 ~F~~~D~d~dG~I~~~El~~~l~~~~-----~~-~~-~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
+|+.||.|++|+|+.+||..++..++ .. +. +.++.+|..+|.|+||.|+|+||+.++..
T Consensus 98 ~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~ 163 (211)
T 2ggz_A 98 YFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMAK 163 (211)
T ss_dssp HHHHHCTTCSSSBCHHHHHHHHHHHTTSSCCCSCTHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHT
T ss_pred HHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCccccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHh
Confidence 99999999999999999999999875 33 43 45899999999999999999999999985
|
| >1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=7e-20 Score=162.99 Aligned_cols=140 Identities=23% Similarity=0.374 Sum_probs=122.1
Q ss_pred hhhhHHHHhhHHHHhcccCC-----CC-C--CcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCc-eehhhhHHHh
Q 010013 365 ENLSEEEIMGLKEMFKSMDT-----DN-S--GTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGT-IDYIEFITAT 435 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D~-----~~-~--g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~-i~~~ef~~~~ 435 (520)
..++++++.++.++|..+|. |+ + |.|+.+||.. +..+|..++.+ .+|..+|.|++|. |+|+||+.++
T Consensus 12 ~~ls~~~~~~l~~~F~~~D~~~~~~~~~~~~G~i~~~el~~-l~~~g~~~~~~---~l~~~~D~d~~G~~I~~~EF~~~~ 87 (183)
T 1dgu_A 12 TFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPFKE---RICRVFSTSPAKDSLSFEDFLDLL 87 (183)
T ss_dssp CSCCHHHHHHHHHHHHHHSCSTTCSSCCCTTTCSCHHHHHT-STTSSSCTTHH---HHHHHHSCSSSSCCCCHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHhCccccccccccccCcCcHHHHHH-HHhhhcCcHHH---HHHHHhCCCCCCCEecHHHHHHHH
Confidence 35788999999999999999 68 8 9999999999 99999887765 5788889999999 9999999987
Q ss_pred hccchh-hhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCC-----C-CHHHHHH----HHHHhcCCCCcceeHHHHHH
Q 010013 436 MHMNRV-EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNM-----G-DAKTIKE----IIAEVDIDNDGRINYEEFAA 504 (520)
Q Consensus 436 ~~~~~~-~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~-----~-~~~~~~~----~~~~~d~~~dg~i~~~ef~~ 504 (520)
...... ...+.++.+|+.||.|++|+|+.+||+.++..++. . +++++.. +|..+|.|+||.|+|+||+.
T Consensus 88 ~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~ 167 (183)
T 1dgu_A 88 SVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQH 167 (183)
T ss_dssp HHHSTTCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHCTTSSSEEEHHHHHH
T ss_pred HHhcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcccccCCCCHHHHHHHHHHHHHHhCCCCCCeEcHHHHHH
Confidence 654332 34568999999999999999999999999998876 3 5666665 99999999999999999999
Q ss_pred HHHc
Q 010013 505 MMRK 508 (520)
Q Consensus 505 ~l~~ 508 (520)
++..
T Consensus 168 ~~~~ 171 (183)
T 1dgu_A 168 VISR 171 (183)
T ss_dssp HHCS
T ss_pred HHHh
Confidence 9976
|
| >2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.81 E-value=1e-19 Score=163.03 Aligned_cols=136 Identities=26% Similarity=0.383 Sum_probs=120.5
Q ss_pred hhHHHHhcccCCC-CCCcccHHHHhhhhhhcCCC-CCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHH
Q 010013 373 MGLKEMFKSMDTD-NSGTITFEELKAGLPKLGTR-LSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKA 450 (520)
Q Consensus 373 ~~l~~~F~~~D~~-~~g~i~~~e~~~~l~~~~~~-~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~ 450 (520)
.++.++|..+|.+ ++|.|+.+||..++..++.. .+.++++.+|..+|.|++|.|+++||..++.........+.++.+
T Consensus 25 ~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~~~~~~~~ 104 (190)
T 2l2e_A 25 KELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWA 104 (190)
T ss_dssp HHHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSSTTCEEHHHHHHHHTTSSCSCSHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCHHHHHHHH
Confidence 3467889999999 89999999999999988643 556789999999999999999999999998776666678889999
Q ss_pred HhhhcCCCCCceeHHHHHHHHHhc----C--------CC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 451 FEYFDKDNSGYITMEELEHALKKY----N--------MG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 451 F~~~D~d~dG~I~~~El~~~l~~~----~--------~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
|+.+|.|++|+|+.+||..++..+ | .. +.+++.++|..+|.|+||.|+|+||+.++..
T Consensus 105 f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~ 175 (190)
T 2l2e_A 105 FQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKR 175 (190)
T ss_dssp HHHHCTTSCSCBCHHHHHHHHHHHHHHHHHHSCCCSSCCCTHHHHHHHHHHHTCCSSCCBCHHHHHHHHHT
T ss_pred HhHccCCCCCcCcHHHHHHHHHHHHHHhccccCcccccccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 999999999999999999999772 2 22 6788999999999999999999999999986
|
| >1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A | Back alignment and structure |
|---|
Probab=99.81 E-value=5.8e-20 Score=165.77 Aligned_cols=133 Identities=22% Similarity=0.338 Sum_probs=121.9
Q ss_pred hhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCC-----CCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchh
Q 010013 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGT-----RLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRV 441 (520)
Q Consensus 367 ~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~-----~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~ 441 (520)
.++.+++++.+ |..+|.|++|.|+.+||..++..++. .++.++++.+|..+|.|++|.|+|+||+.++..
T Consensus 27 ~~~~~~~~l~~-F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~eF~~~~~~---- 101 (198)
T 1juo_A 27 FPGQTQDPLYG-YFAAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAV---- 101 (198)
T ss_dssp CTTCCCCTTHH-HHHHHHTTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH----
T ss_pred CCccccHHHHH-HHHHhCCCCCcCCHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhCCCCCCeECHHHHHHHHHH----
Confidence 55667888999 99999999999999999999999886 578999999999999999999999999987753
Q ss_pred hhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 442 ~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
...++.+|+.+|.|++|+|+.+||+.++..+|.. ++++++++|..+ |+||.|+|+||+.++..
T Consensus 102 --~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~--d~dg~i~~~eF~~~~~~ 165 (198)
T 1juo_A 102 --LNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRY--STNGKITFDDYIACCVK 165 (198)
T ss_dssp --HHHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHT--CSSSSEEHHHHHHHHHH
T ss_pred --HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHH
Confidence 2578999999999999999999999999999987 889999999999 89999999999998764
|
| >3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1.2e-19 Score=167.55 Aligned_cols=142 Identities=25% Similarity=0.378 Sum_probs=123.1
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhc-CCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhh
Q 010013 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL-GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVER 443 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~-~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~ 443 (520)
..++.+++..+.+.|.. .+++|.|+.+||..++..+ +...+...++.+|..+|.|++|.|+|+||+.++........
T Consensus 59 ~~~s~~ei~~l~~~F~~--~d~~G~Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d~~G~I~~~Ef~~~l~~~~~~~~ 136 (229)
T 3dd4_A 59 SKFTKKELQILYRGFKN--ECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTV 136 (229)
T ss_dssp HHHHHHHHHHHHHHHHT--TCCSCCCCHHHHHHHHHHHSCSSSHHHHHHHHHHTTCSSCCSSCCHHHHHHHHHHHHHSCH
T ss_pred cCCCHHHHHHHHHHHHh--hCCCCCcCHHHHHHHHHHHCCCCCcHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHcCCCh
Confidence 45778888888888876 5788999999999999885 44566777899999999999999999999998876655566
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHhc------------CCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKY------------NMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~------------~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.+.++.+|+.||.|++|+|+.+||..++..+ +.. .+++++.+|..+|.|+||.|+|+||+.++.+
T Consensus 137 ~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~ 214 (229)
T 3dd4_A 137 QEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQK 214 (229)
T ss_dssp HHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC-----------CCTHHHHHHHHHCSSCSSBCCHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcchhhHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHh
Confidence 7889999999999999999999999999876 333 5578999999999999999999999999986
|
| >1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.80 E-value=3.4e-19 Score=163.77 Aligned_cols=142 Identities=23% Similarity=0.335 Sum_probs=121.7
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCC-CCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhh
Q 010013 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTR-LSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVER 443 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~-~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~ 443 (520)
..++.++++++.+.|... |++|.|+.+||..++..++.. .+..+++.+|..+|.|++|.|+|+||+.++........
T Consensus 46 ~~~s~~ei~~l~~~Fd~~--d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~l~~~~~~~~ 123 (224)
T 1s1e_A 46 TNFTKRELQVLYRGFKNE--CPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTV 123 (224)
T ss_dssp SSCCHHHHHHHHHHHHHH--CTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHCCH
T ss_pred cCCCHHHHHHHHHHHHhh--CCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCCCCcEeHHHHHHHHHHHccCCH
Confidence 347777766655555543 489999999999999998754 78899999999999999999999999998876555567
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHhc----CCC---------CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKY----NMG---------DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~----~~~---------~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.+.++.+|+.||.|++|+|+.+||..++..+ |.. ..+++.++|+.+|.|+||.|+|+||+.++..
T Consensus 124 ~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~ 201 (224)
T 1s1e_A 124 HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQE 201 (224)
T ss_dssp HHHHHHHHHHHCTTCCSEECHHHHHHHHHHHHHHHTTCCCGGGCSSSHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCCCeECHHHHHHHHHHHHHHhcccCCCCCCHhHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 7889999999999999999999999999875 531 2478999999999999999999999999986
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=99.80 E-value=3.4e-19 Score=156.05 Aligned_cols=124 Identities=23% Similarity=0.355 Sum_probs=114.0
Q ss_pred HHhcccCCCCCCcccHHHHhhhhhhcCC-----CCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHH
Q 010013 377 EMFKSMDTDNSGTITFEELKAGLPKLGT-----RLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAF 451 (520)
Q Consensus 377 ~~F~~~D~~~~g~i~~~e~~~~l~~~~~-----~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F 451 (520)
+.|..+|.|++|.|+.+||..++..+|. .++.++++.+|..+|.|++|.|+|+||+.++.. ...++.+|
T Consensus 5 ~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~------~~~~~~~F 78 (167)
T 1gjy_A 5 YGYFASVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAV------LNGWRQHF 78 (167)
T ss_dssp HHHHHHHCCTTSCBCHHHHHHHHHHHTCSTTSCCCCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHH------HHHHHHHH
T ss_pred HHHHHHHcCCCCcCCHHHHHHHHHhhcccCCCCCcCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH------HHHHHHHH
Confidence 4588999999999999999999999886 678999999999999999999999999987753 25789999
Q ss_pred hhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 452 EYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 452 ~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
+.+|.|++|+|+.+||+.++..+|.. +++++..++..+ |+||.|+|+||+.++..
T Consensus 79 ~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~ 134 (167)
T 1gjy_A 79 ISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRY--STSGKITFDDYIACCVK 134 (167)
T ss_dssp HHHCTTCCSEECHHHHHHHHHTTTCCCCHHHHHHHHHHT--CBTTBEEHHHHHHHHHH
T ss_pred HHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHh--CcCCcCcHHHHHHHHHH
Confidence 99999999999999999999999887 889999999999 89999999999998753
|
| >2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.80 E-value=2.2e-19 Score=157.59 Aligned_cols=119 Identities=18% Similarity=0.257 Sum_probs=107.1
Q ss_pred cCCCCCCcccHHHHhhhhhhc------CCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhc
Q 010013 382 MDTDNSGTITFEELKAGLPKL------GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFD 455 (520)
Q Consensus 382 ~D~~~~g~i~~~e~~~~l~~~------~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D 455 (520)
=++|++|.|+.+||..+|+.+ +..++.++++.+|..+|.|++|.|+|+||+.++.. ...++.+|+.||
T Consensus 13 ~~~~~dG~I~~~EL~~~l~~l~~~~~~g~~~~~~~~~~l~~~~D~d~~G~I~f~EF~~~~~~------~~~l~~aF~~fD 86 (174)
T 2i7a_A 13 GLVPRGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNGRLDQEEFARLWKR------LVHYQHVFQKVQ 86 (174)
T ss_dssp CSCC-CCCEEHHHHHHHHHHHHC-----CCCCHHHHHHHHHHHCSSCSSEECHHHHHHHHHH------HHHHHHHHHHHC
T ss_pred ccCCCCCcCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH------HHHHHHHHHHhc
Confidence 368899999999999999998 56788999999999999999999999999987643 257899999999
Q ss_pred CCCCCceeHHHHHHHHHhc----CCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 456 KDNSGYITMEELEHALKKY----NMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 456 ~d~dG~I~~~El~~~l~~~----~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
|++|+|+.+||+.++..+ |.. +++++++++..+| |+||.|+|+||+.++..
T Consensus 87 -d~~G~I~~~El~~~l~~l~~~~G~~~~~~~~~~l~~~~d-d~dG~I~~~EF~~~~~~ 142 (174)
T 2i7a_A 87 -TSPGVLLSSDLWKAIENTDFLRGIFISRELLHLVTLRYS-DSVGRVSFPSLVCFLMR 142 (174)
T ss_dssp -SBTTBEEGGGHHHHHHTCGGGTTCCCCHHHHHHHHHHHS-CTTSEECHHHHHHHHHH
T ss_pred -CCCCcCCHHHHHHHHHHhHhccCCCCCHHHHHHHHHHHc-CCCCeEcHHHHHHHHHH
Confidence 999999999999999999 877 8889999999999 99999999999998864
|
| >1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.8e-19 Score=161.30 Aligned_cols=140 Identities=24% Similarity=0.365 Sum_probs=119.7
Q ss_pred hhhHHHHhhHHHHhcccCCC-CCCcccHHHHhhhhhhc-CCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhh
Q 010013 366 NLSEEEIMGLKEMFKSMDTD-NSGTITFEELKAGLPKL-GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVER 443 (520)
Q Consensus 366 ~~~~~~~~~l~~~F~~~D~~-~~g~i~~~e~~~~l~~~-~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~ 443 (520)
.++.+ ++.++|+.||.+ ++|.|+.+||..++..+ +...+..++..+|..+|.|++|.|+++||..++........
T Consensus 21 ~~~~~---~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~ 97 (190)
T 1g8i_A 21 YFTEK---EVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTL 97 (190)
T ss_dssp SSCHH---HHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCH
T ss_pred CCCHH---HHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCCeEeHHHHHHHHHHhcCCCH
Confidence 44554 466777788887 89999999999999987 23356788999999999999999999999998876655567
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHhc----C--------CC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKY----N--------MG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~----~--------~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.+.++.+|+.+|.|++|.|+.+||..++..+ | .. +++++.++|..+|.|+||.|+|+||+.++..
T Consensus 98 ~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~ef~~~~~~ 175 (190)
T 1g8i_A 98 DEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKA 175 (190)
T ss_dssp HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCCCeECHHHHHHHHHHHHHHhCCccCCccccccHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHh
Confidence 7889999999999999999999999999872 3 22 5678999999999999999999999999986
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A | Back alignment and structure |
|---|
Probab=99.80 E-value=3e-19 Score=156.04 Aligned_cols=124 Identities=23% Similarity=0.338 Sum_probs=114.3
Q ss_pred HHhcccCCCCCCcccHHHHhhhhhhcCC-----CCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHH
Q 010013 377 EMFKSMDTDNSGTITFEELKAGLPKLGT-----RLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAF 451 (520)
Q Consensus 377 ~~F~~~D~~~~g~i~~~e~~~~l~~~~~-----~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F 451 (520)
+.|..+|.|++|.|+.+||..++..+|. .++.++++.+|..+|.|++|.|+|+||+.++.. ...++.+|
T Consensus 3 ~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~------~~~~~~~F 76 (165)
T 1k94_A 3 YTYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAA------LNAWKENF 76 (165)
T ss_dssp HHHHHHHHGGGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHH------HHHHHHHH
T ss_pred HHHHHHhCCCCCcCCHHHHHHHHHHhccccCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH------HHHHHHHH
Confidence 4588999999999999999999999886 678999999999999999999999999987753 25789999
Q ss_pred hhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 452 EYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 452 ~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
+.+|.|++|+|+.+||+.++..+|.. ++++++.++..+ |+||.|+|+||+.++..
T Consensus 77 ~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~ 132 (165)
T 1k94_A 77 MTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRY--SKNGRIFFDDYVACCVK 132 (165)
T ss_dssp HHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHH--CBTTBCBHHHHHHHHHH
T ss_pred HHhCCCCCceECHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHH
Confidence 99999999999999999999999987 889999999999 89999999999998864
|
| >2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A | Back alignment and structure |
|---|
Probab=99.80 E-value=8.4e-20 Score=166.54 Aligned_cols=140 Identities=23% Similarity=0.372 Sum_probs=120.7
Q ss_pred hhhhHHHHhhHHHHhcccCC-----CC-C--CcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCc-eehhhhHHHh
Q 010013 365 ENLSEEEIMGLKEMFKSMDT-----DN-S--GTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGT-IDYIEFITAT 435 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D~-----~~-~--g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~-i~~~ef~~~~ 435 (520)
..++.+++.++.++|..+|. |+ + |.|+.+||.. +..++..+..+ .+|..+|.|++|. |+|+||+.++
T Consensus 43 t~~s~~ei~~l~~~F~~~D~~~~~~d~~~~dG~I~~~E~~~-l~~lg~~~~~~---~lf~~~D~d~dG~~I~f~EF~~~~ 118 (214)
T 2l4h_A 43 TFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPFKE---RICRVFSTSPAKDSLSFEDFLDLL 118 (214)
T ss_dssp CSCCHHHHHHHHHHHHHHSCGGGCCHHHHTTSEECHHHHTT-CHHHHTSTTHH---HHHHHHCCSSSCCSEEHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCcccccccccccCCcCCHHHHHH-hhccCCChHHH---HHHHHhCcCCCCCEecHHHHHHHH
Confidence 46899999999999999998 66 6 9999999999 88888877654 6788899999999 9999999987
Q ss_pred hccchh-hhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCC-----C-CHHHHH----HHHHHhcCCCCcceeHHHHHH
Q 010013 436 MHMNRV-EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNM-----G-DAKTIK----EIIAEVDIDNDGRINYEEFAA 504 (520)
Q Consensus 436 ~~~~~~-~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~-----~-~~~~~~----~~~~~~d~~~dg~i~~~ef~~ 504 (520)
...... ...+.++.+|+.||.|++|+|+.+||+.++..++. . ++++++ .+|..+|.|+||.|+|+||+.
T Consensus 119 ~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~D~d~dG~Is~~EF~~ 198 (214)
T 2l4h_A 119 SVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQH 198 (214)
T ss_dssp HHTSSCSCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHHHHHHHHHHHCCSCCSSBCSHHHHH
T ss_pred HHHcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHHhCCCCCCcCCHHHHHH
Confidence 654332 34678999999999999999999999999987753 2 444455 599999999999999999999
Q ss_pred HHHc
Q 010013 505 MMRK 508 (520)
Q Consensus 505 ~l~~ 508 (520)
++..
T Consensus 199 ~~~~ 202 (214)
T 2l4h_A 199 VISR 202 (214)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 9986
|
| >1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.80 E-value=4.1e-19 Score=159.43 Aligned_cols=140 Identities=28% Similarity=0.451 Sum_probs=119.8
Q ss_pred hhhHHHHhhHHHHhcccCCC-CCCcccHHHHhhhhhhcCCCC-CHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhh
Q 010013 366 NLSEEEIMGLKEMFKSMDTD-NSGTITFEELKAGLPKLGTRL-SESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVER 443 (520)
Q Consensus 366 ~~~~~~~~~l~~~F~~~D~~-~~g~i~~~e~~~~l~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~ 443 (520)
.++.++ +.++|..||.+ ++|.|+.+||..++..++... ...+++.+|..+|.|++|.|++.||..++........
T Consensus 21 ~~~~~~---i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~ 97 (193)
T 1bjf_A 21 DFTEHE---IQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKL 97 (193)
T ss_dssp SCCHHH---HHHHHHHHHHHSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSCH
T ss_pred CCCHHH---HHHHHHHHHHHCCCCCcCHHHHHHHHHHhcCcCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCH
Confidence 356555 56778888888 899999999999999987644 4677999999999999999999999998876555567
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHhc----CC--C-------CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKY----NM--G-------DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~----~~--~-------~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.+.++.+|+.+|.|++|+|+.+||..++..+ |. . ..+.+..+|..+|.|+||.|+++||+.++..
T Consensus 98 ~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~ 175 (193)
T 1bjf_A 98 EQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKS 175 (193)
T ss_dssp HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCCCCeECHHHHHHHHHHHHHHhccccCCCcccccHHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence 7889999999999999999999999999763 41 1 1356999999999999999999999999975
|
| >2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.7e-19 Score=163.90 Aligned_cols=136 Identities=19% Similarity=0.255 Sum_probs=118.9
Q ss_pred hhHHHHhcccCCC-CCCcccHHHHhhhhhhcCCC-CCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHH
Q 010013 373 MGLKEMFKSMDTD-NSGTITFEELKAGLPKLGTR-LSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKA 450 (520)
Q Consensus 373 ~~l~~~F~~~D~~-~~g~i~~~e~~~~l~~~~~~-~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~ 450 (520)
.++.++|..+|.+ ++|.|+.+||..++..++.. .+.+++..+|..+|.|++|.|+++||+.++.........+.++.+
T Consensus 33 ~~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~~~ 112 (207)
T 2d8n_A 33 EELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEWA 112 (207)
T ss_dssp HHHHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHSCSSSSTTHHHH
T ss_pred HHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCHHHHHHHH
Confidence 3466778888888 79999999999999998764 788899999999999999999999999988765544566789999
Q ss_pred HhhhcCCCCCceeHHHHHHHHHhc----C----CC-------CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 451 FEYFDKDNSGYITMEELEHALKKY----N----MG-------DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 451 F~~~D~d~dG~I~~~El~~~l~~~----~----~~-------~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
|+.+|.|++|+|+.+||..++..+ | .. .++++..+|..+|.|+||.|+|+||+.++..
T Consensus 113 f~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~ 185 (207)
T 2d8n_A 113 FSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTLA 185 (207)
T ss_dssp HHHHCTTCSSEECHHHHHHHHHHHHHHSCHHHHHTSCTTTSSHHHHHHHHHHHTTCCTTCCEEHHHHHHHHHH
T ss_pred HHHhcCCCCCeEcHHHHHHHHHHHHHHhccccCCCcccccccHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHh
Confidence 999999999999999999999875 5 22 2367999999999999999999999999986
|
| >1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A | Back alignment and structure |
|---|
Probab=99.78 E-value=4.6e-19 Score=158.66 Aligned_cols=140 Identities=28% Similarity=0.380 Sum_probs=118.7
Q ss_pred hhhHHHHhhHHHHhcccCCC-CCCcccHHHHhhhhhhcCC-CCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhh
Q 010013 366 NLSEEEIMGLKEMFKSMDTD-NSGTITFEELKAGLPKLGT-RLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVER 443 (520)
Q Consensus 366 ~~~~~~~~~l~~~F~~~D~~-~~g~i~~~e~~~~l~~~~~-~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~ 443 (520)
.++.+++ .++|+.||.+ ++|.|+.+||..++..++. ..+.++++.+|..+|.|++|.|+++||..++........
T Consensus 21 ~~~~~~i---~~~~~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~ 97 (190)
T 1fpw_A 21 YFDRREI---QQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTL 97 (190)
T ss_dssp CSTHHHH---HHHHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCS
T ss_pred CCCHHHH---HHHHHHHHHHCCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHHccCCc
Confidence 4666554 5566666666 8999999999999998753 345677999999999999999999999998876555566
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHh----cCC---------CCHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKK----YNM---------GDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~----~~~---------~~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.+.++.+|+.+|.|++|.|+.+||..++.. +|. ...+++..+|..+|.|+||.|+++||+.++..
T Consensus 98 ~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~ 175 (190)
T 1fpw_A 98 EEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKV 175 (190)
T ss_dssp THHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHHHHHS
T ss_pred HHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHHHhccccCcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 778999999999999999999999999987 342 25678999999999999999999999999987
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.8e-19 Score=170.21 Aligned_cols=143 Identities=24% Similarity=0.378 Sum_probs=125.5
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCH------HHHHHHHHHhcCCCCCceehhhhHHHhhcc
Q 010013 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSE------SEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~------~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 438 (520)
..+++.+++++.++|..+|.|++|.|+.+||..++..++..++. .++..+|..+|.|++|.|+|+||+.++...
T Consensus 8 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~l~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~Ef~~~~~~~ 87 (263)
T 2f33_A 8 LQSSLITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPTE 87 (263)
T ss_dssp TTTSCCCHHHHHHHHHHHCTTCSSSBCSHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHTTGGGCCBCHHHHHHHTTSC
T ss_pred hhcCcccHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhh
Confidence 45777888899999999999999999999999999988755544 789999999999999999999999987543
Q ss_pred ---------chhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhc----CCC-CHHHHHH----HHHHhcCCCCcceeHH
Q 010013 439 ---------NRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY----NMG-DAKTIKE----IIAEVDIDNDGRINYE 500 (520)
Q Consensus 439 ---------~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~----~~~-~~~~~~~----~~~~~d~~~dg~i~~~ 500 (520)
......+.++.+|+.+|.|++|+|+.+||..++..+ |.. +..++.. +|..+|.|++|.|+|+
T Consensus 88 ~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ 167 (263)
T 2f33_A 88 ENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELT 167 (263)
T ss_dssp TTHHHHHGGGTSSCHHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCBCHH
T ss_pred hhHHHHHHHhhccHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeEcHH
Confidence 334456789999999999999999999999999987 766 7777766 9999999999999999
Q ss_pred HHHHHHH
Q 010013 501 EFAAMMR 507 (520)
Q Consensus 501 ef~~~l~ 507 (520)
||+.++.
T Consensus 168 ef~~~~~ 174 (263)
T 2f33_A 168 EMARLLP 174 (263)
T ss_dssp HHHHHSC
T ss_pred HHHHHHH
Confidence 9999875
|
| >2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=99.77 E-value=1e-18 Score=164.14 Aligned_cols=141 Identities=23% Similarity=0.361 Sum_probs=120.7
Q ss_pred hhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcC-CCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhH
Q 010013 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLG-TRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVERE 444 (520)
Q Consensus 366 ~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~-~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~ 444 (520)
.++.+++..+.+.|.. .+++|.|+.+||..++..++ ...+..+++.+|..+|.|++|.|+|+||+.++.........
T Consensus 87 ~~s~~ei~~l~~~fd~--~~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~ 164 (256)
T 2jul_A 87 KFTKKELQSLYRGFKN--ECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVH 164 (256)
T ss_dssp TSCHHHHHHHHHHHHH--HCTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSCCSEECSHHHHHHHHHHHSCCHH
T ss_pred CCCHHHHHHHHHHHHh--hCCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHhccChH
Confidence 4677776665555543 24899999999999999886 45678889999999999999999999999988765555677
Q ss_pred HHHHHHHhhhcCCCCCceeHHHHHHHHHhc----C--------CC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 445 EHLYKAFEYFDKDNSGYITMEELEHALKKY----N--------MG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 445 ~~~~~~F~~~D~d~dG~I~~~El~~~l~~~----~--------~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
+.++.+|+.+|.|++|+|+.+||..++..+ | .. .++++..+|..+|.|+||.|+|+||+.++..
T Consensus 165 ~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~ 241 (256)
T 2jul_A 165 EKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQK 241 (256)
T ss_dssp HHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSCCCCHHHHHHHHHHHSCCSTTCSBCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccchhhHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 889999999999999999999999999876 4 22 5678999999999999999999999999987
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A | Back alignment and structure |
|---|
Probab=99.77 E-value=1e-18 Score=165.84 Aligned_cols=137 Identities=21% Similarity=0.385 Sum_probs=119.2
Q ss_pred HhhHHHHhcccCCCCCCcccHHHHhhhhhhc----CCCCCHHHHH----HHHHHhcCCCCCceehhhhHHHhhcc-----
Q 010013 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKL----GTRLSESEVR----QLMEAADVDGNGTIDYIEFITATMHM----- 438 (520)
Q Consensus 372 ~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~----~~~~~~~~~~----~~~~~~d~~~~g~i~~~ef~~~~~~~----- 438 (520)
..++..+|+.+|.|++|.|+.+||..++..+ |..++.+++. .+|..+|.|++|.|+|+||..++...
T Consensus 103 ~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~~~~~~ 182 (272)
T 2be4_A 103 SVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQENFLL 182 (272)
T ss_dssp HHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEEEHHHHGGGSCCSSCSST
T ss_pred HHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccCCCCcCcHHHHHHHHhhhHHHHh
Confidence 3468899999999999999999999999987 8888888765 49999999999999999999876531
Q ss_pred -------chhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCC----C-CHHHHHH----HHHHhcCCCCcceeHHHH
Q 010013 439 -------NRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNM----G-DAKTIKE----IIAEVDIDNDGRINYEEF 502 (520)
Q Consensus 439 -------~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~----~-~~~~~~~----~~~~~d~~~dg~i~~~ef 502 (520)
......+.++.+|+.+|.|++|+|+.+||+.++..++. . ++++++. +|..+|.|+||.|+|+||
T Consensus 183 ~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~D~d~dG~is~~EF 262 (272)
T 2be4_A 183 QFKMDASSQVERKRDFEKIFAHYDVSRTGALEGPEVDGFVKDMMELVRPSISGGDLDKFRECLLTHCDMNKDGKIQKSEL 262 (272)
T ss_dssp TSCCCHHHHHHHHHHHHHHHHHHCTTCCSEEETHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHCCSTTCEEEHHHH
T ss_pred hhhhhhccccccHHHHHHHHHHhCCCCCCeecHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHH
Confidence 22345678999999999999999999999999987764 3 7777776 999999999999999999
Q ss_pred HHHHHc
Q 010013 503 AAMMRK 508 (520)
Q Consensus 503 ~~~l~~ 508 (520)
+.+|..
T Consensus 263 ~~~~~~ 268 (272)
T 2be4_A 263 ALCLGL 268 (272)
T ss_dssp HHHTTC
T ss_pred HHHHcc
Confidence 999875
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A | Back alignment and structure |
|---|
Probab=99.76 E-value=8.3e-19 Score=165.55 Aligned_cols=137 Identities=23% Similarity=0.393 Sum_probs=120.4
Q ss_pred HhhHHHHhcccCCCCCCcccHHHHhhhhhhc----CCCCCHHHHHH----HHHHhcCCCCCceehhhhHHHhhcc-----
Q 010013 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKL----GTRLSESEVRQ----LMEAADVDGNGTIDYIEFITATMHM----- 438 (520)
Q Consensus 372 ~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~----~~~~~~~~~~~----~~~~~d~~~~g~i~~~ef~~~~~~~----- 438 (520)
..++..+|+.+|.|++|+|+.+||..++..+ |..++.+++.. +|..+|.|++|.|+|+||+.++...
T Consensus 102 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~~~~ 181 (263)
T 2f33_A 102 CEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFLL 181 (263)
T ss_dssp HHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCBCHHHHHHHSCTTTCSHH
T ss_pred HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHHHHHHHHH
Confidence 4568899999999999999999999999988 88889888876 9999999999999999999877531
Q ss_pred ---chhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCC----C-CHHHHHHHHHH-hcCCCCcceeHHHHHHHHHc
Q 010013 439 ---NRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNM----G-DAKTIKEIIAE-VDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 439 ---~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~----~-~~~~~~~~~~~-~d~~~dg~i~~~ef~~~l~~ 508 (520)
........++.+|+.||+|++|+|+.+||+.++..++. . +++++..++.. +|.|+||.|+|+||+.+|..
T Consensus 182 ~~~~~~~~~~~~~~~F~~~D~d~~G~is~~El~~~l~~~~~~~~~~~~~~e~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 260 (263)
T 2f33_A 182 KFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCEKNKQELDINNISTYKKNIMALSDGGKLYRTDLALILSA 260 (263)
T ss_dssp HHHHTCCCHHHHHHHHHHHCCSSSSCEEHHHHHHHHHHHHHHCTTTCCTTTHHHHHHHHHTTSBTTEECGGGTHHHHCC
T ss_pred HhcCcchHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhccCCCCeEcHHHHHHHHhc
Confidence 12244678999999999999999999999999988765 4 67788899987 79999999999999999975
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A | Back alignment and structure |
|---|
Probab=99.76 E-value=8.1e-19 Score=169.82 Aligned_cols=131 Identities=21% Similarity=0.412 Sum_probs=119.9
Q ss_pred HHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHH-HHHHhcCCCCCceehhhhHHHhhccchhhhHHHHH
Q 010013 370 EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQ-LMEAADVDGNGTIDYIEFITATMHMNRVEREEHLY 448 (520)
Q Consensus 370 ~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~-~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~ 448 (520)
.....+..+|..+|.|++|+|+.+||..++ +|..++..++.. +|..+|.|++|.|+|.||+.++.... .+.
T Consensus 185 ~~~~~l~~~F~~~D~d~dG~Is~~El~~~l--~g~~~~~~ei~~~l~~~~D~d~dG~Is~~EF~~~l~~~~------~l~ 256 (323)
T 1ij5_A 185 NDLAALVADFRKIDTNSNGTLSRKEFREHF--VRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLL------VLR 256 (323)
T ss_dssp HHHHTSCCCHHHHCTTCCSEECHHHHHHHH--HHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHH------HHH
T ss_pred hHHHHHHHHHHHHCCCCCCcCcHHHHHHHH--cCCCCCHHHHHHHHHHHhcCCCCCEEeHHHHHHHHHHHH------HHH
Confidence 455678899999999999999999999999 788888999999 99999999999999999999875432 789
Q ss_pred HHHhhhcCCCCCceeHHHHHHHH-HhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 449 KAFEYFDKDNSGYITMEELEHAL-KKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 449 ~~F~~~D~d~dG~I~~~El~~~l-~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.+|+.||.|++|+||.+||..++ ..+|.. +++++..+|..+|.|+||.|+|+||+.+|..
T Consensus 257 ~~F~~~D~d~dG~Is~~El~~~l~~~~g~~ls~~e~~~l~~~~D~d~dG~Is~~EF~~~~~~ 318 (323)
T 1ij5_A 257 ILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLVLL 318 (323)
T ss_dssp HHHHHTCSSSCSSEEHHHHHHHHHHTTCCGGGCSTHHHHHHHHTTTTCSEECHHHHHHHHHH
T ss_pred HHHHHhCCCCCCCccHHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence 99999999999999999999999 888876 6678999999999999999999999999875
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A | Back alignment and structure |
|---|
Probab=99.75 E-value=9.9e-19 Score=165.92 Aligned_cols=143 Identities=22% Similarity=0.437 Sum_probs=121.7
Q ss_pred hhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhh----hcCC--CCCHHHHHHH----HHHhcCCCCCceehhhhHHHh
Q 010013 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLP----KLGT--RLSESEVRQL----MEAADVDGNGTIDYIEFITAT 435 (520)
Q Consensus 366 ~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~----~~~~--~~~~~~~~~~----~~~~d~~~~g~i~~~ef~~~~ 435 (520)
.+++.+++++.++|..+|.|++|.|+.+||..++. .+|. .++.+++..+ |..+|.|++|.|+|+||+.++
T Consensus 4 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~lg~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~ 83 (272)
T 2be4_A 4 AFANLDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANMI 83 (272)
T ss_dssp CCCCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHHSTTSCCCHHHHHHHHHHHSCHHHHTCCSEEEHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEeHHHHHHHH
Confidence 35566678899999999999999999999999998 8898 8898888764 478899999999999999984
Q ss_pred h-----------ccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhc----CCC-CHHHH----HHHHHHhcCCCCc
Q 010013 436 M-----------HMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY----NMG-DAKTI----KEIIAEVDIDNDG 495 (520)
Q Consensus 436 ~-----------~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~----~~~-~~~~~----~~~~~~~d~~~dg 495 (520)
. ..........++.+|+.+|.|++|.|+.+||..++..+ |.. +.+++ ..+|..+|.|+||
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~~dg 163 (272)
T 2be4_A 84 LPQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDG 163 (272)
T ss_dssp SCHHHHHHHHHHHHSCCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSS
T ss_pred hhhhHHHHHHHhhccCcccHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccCCCC
Confidence 2 22223456789999999999999999999999999887 666 66665 4599999999999
Q ss_pred ceeHHHHHHHHHc
Q 010013 496 RINYEEFAAMMRK 508 (520)
Q Consensus 496 ~i~~~ef~~~l~~ 508 (520)
.|+|+||+.++..
T Consensus 164 ~i~~~ef~~~~~~ 176 (272)
T 2be4_A 164 RLDLNDLARILAL 176 (272)
T ss_dssp EEEHHHHGGGSCC
T ss_pred cCcHHHHHHHHhh
Confidence 9999999998754
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.74 E-value=5.8e-18 Score=165.16 Aligned_cols=142 Identities=17% Similarity=0.203 Sum_probs=101.7
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccC-----------CcccH--------HHHHHHHHHHHhccCCC
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI-----------NRDDV--------EDVRREVQIMHHLTGHR 128 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-----------~~~~~--------~~~~~e~~~l~~l~~hp 128 (520)
.|.+++.||+|+||.||+|.+. +|+.||||+++..... ..... -...+|...|.++. +.
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~-~~ 173 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALY-EE 173 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHH-HT
T ss_pred EEEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHH-hc
Confidence 4889999999999999999985 5899999987532110 00000 11246778888886 44
Q ss_pred Cee--EEEEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCC
Q 010013 129 NIV--ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAE 206 (520)
Q Consensus 129 ~iv--~l~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~ 206 (520)
++. ..++. .. .+|||||++|++|.... ..+.+..++.||+.+|.+||+.|||||||||.|||++.+++
T Consensus 174 gv~vp~p~~~--~~--~~LVME~i~G~~L~~l~------~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd 243 (397)
T 4gyi_A 174 GFPVPEPIAQ--SR--HTIVMSLVDALPMRQVS------SVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKD 243 (397)
T ss_dssp TCSCCCEEEE--ET--TEEEEECCSCEEGGGCC------CCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEEC
T ss_pred CCCCCeeeec--cC--ceEEEEecCCccHhhhc------ccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCC
Confidence 442 33332 22 36999999998886532 22345678899999999999999999999999999975432
Q ss_pred C-------CCeeEeeccccccc
Q 010013 207 D-------SPLKATDFGLSVFF 221 (520)
Q Consensus 207 ~-------~~~kl~Dfg~a~~~ 221 (520)
. ..+.|+||+-+...
T Consensus 244 ~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 244 AEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp SSCTTSEEEEEEECCCTTCEET
T ss_pred cccccccccceEEEEeCCcccC
Confidence 1 13789999977653
|
| >3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L | Back alignment and structure |
|---|
Probab=99.73 E-value=1.1e-17 Score=178.46 Aligned_cols=135 Identities=21% Similarity=0.364 Sum_probs=125.1
Q ss_pred hhhHHH-HhhHHHHhcccCCCCCCcccHHHHhhhhhhc--------CCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhh
Q 010013 366 NLSEEE-IMGLKEMFKSMDTDNSGTITFEELKAGLPKL--------GTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (520)
Q Consensus 366 ~~~~~~-~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~--------~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 436 (520)
.+++++ ++++.++|+.+| |++|.|+.+||..+|..+ +..++.++++.+|..+|.|++|.|+|+||+.++.
T Consensus 524 ~ls~~e~~~~l~~~F~~~D-d~dG~Is~~El~~~L~~l~~~~~~~~g~~~s~~~~~~l~~~~D~d~~G~I~f~EF~~l~~ 602 (714)
T 3bow_A 524 EANEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWT 602 (714)
T ss_dssp CCSGGGCCHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHTTCTTSCCSCCCHHHHHHHHHHHCCSSCSSBCHHHHHHHHH
T ss_pred CCChhhHHHHHHHHHHHHc-CCCCcCCHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 367777 889999999999 999999999999999997 7789999999999999999999999999999875
Q ss_pred ccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 437 HMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 437 ~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.. +.++.+|+.||.|++|+|+.+||+.+|..+|.. ++++++.+|..+| |+||.|+|+||+.+|..
T Consensus 603 ~~------~~l~~~F~~~D~d~dG~Is~~El~~~L~~~G~~ls~~~~~~l~~~~D-d~dG~Isf~EF~~~l~~ 668 (714)
T 3bow_A 603 KI------QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVR 668 (714)
T ss_dssp HH------HHHHHHHHHHCTTCCSSEEHHHHHHHHHHTTEECCHHHHHHHHHHHS-CTTCEECHHHHHHHHHH
T ss_pred HH------HHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHH
Confidence 43 679999999999999999999999999999877 8889999999999 99999999999998864
|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A | Back alignment and structure |
|---|
Probab=99.70 E-value=5.7e-17 Score=130.82 Aligned_cols=102 Identities=25% Similarity=0.476 Sum_probs=92.5
Q ss_pred cCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhc---CCC-
Q 010013 402 LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY---NMG- 477 (520)
Q Consensus 402 ~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~---~~~- 477 (520)
++..+++++++.+|..+| ++|.|+|+||+.++.. .....+.++.+|+.||.|++|+|+.+||+.++..+ +..
T Consensus 3 l~~~~~~~ei~~~~~~~D--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~ 78 (109)
T 3fs7_A 3 ITDILSAKDIESALSSCQ--AADSFNYKSFFSTVGL--SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVL 78 (109)
T ss_dssp GGGTSCHHHHHHHHHHTC--STTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCCC
T ss_pred ccCcCCHHHHHHHHHhcC--CCCcCcHHHHHHHHhc--CCCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccccC
Confidence 567789999999999998 7999999999998764 23467789999999999999999999999999998 666
Q ss_pred CHHHHHHHHHHhcCCCCcceeHHHHHHHHH
Q 010013 478 DAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507 (520)
Q Consensus 478 ~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~ 507 (520)
++++++.+|..+|.|+||.|+|+||+.+|+
T Consensus 79 ~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~ 108 (109)
T 3fs7_A 79 TSAETKAFLAAGDTDGDGKIGVEEFQSLVK 108 (109)
T ss_dssp CHHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred CHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 889999999999999999999999999986
|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=99.70 E-value=1.4e-16 Score=128.43 Aligned_cols=103 Identities=24% Similarity=0.439 Sum_probs=93.0
Q ss_pred hcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhc---CCC
Q 010013 401 KLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY---NMG 477 (520)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~---~~~ 477 (520)
++|..+++++++.++..+| ++|.|+|+||+.++... ....+.++.+|+.||.|++|+|+.+||+.++..+ |..
T Consensus 2 slg~~~~~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~ 77 (109)
T 1bu3_A 2 AFSGILADADVAAALKACE--AADSFNYKAFFAKVGLT--AKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARA 77 (109)
T ss_dssp CCSCSSCHHHHHHHHHHTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCCC
T ss_pred cccccCCHHHHHHHHHHhC--CCCcCcHHHHHHHHHcC--hhhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCC
Confidence 4788899999999999998 89999999999977532 3456789999999999999999999999999998 666
Q ss_pred -CHHHHHHHHHHhcCCCCcceeHHHHHHHHH
Q 010013 478 -DAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507 (520)
Q Consensus 478 -~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~ 507 (520)
++++++.+|..+|.|+||.|+|+||+.+++
T Consensus 78 ~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 108 (109)
T 1bu3_A 78 LTDAETKAFLKAGDSDGDGAIGVDEWAALVK 108 (109)
T ss_dssp CCHHHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 889999999999999999999999999885
|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=99.69 E-value=1.2e-16 Score=128.82 Aligned_cols=103 Identities=30% Similarity=0.492 Sum_probs=92.7
Q ss_pred cCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhc---CCC-
Q 010013 402 LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY---NMG- 477 (520)
Q Consensus 402 ~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~---~~~- 477 (520)
++..++.++++.++..+|. +|.|+|+||+.++... ....+.++.+|+.||.|++|+|+.+||+.++..+ |..
T Consensus 2 l~~~~s~~ei~~~~~~~d~--~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~~~ 77 (109)
T 5pal_A 2 MTKVLKADDINKAISAFKD--PGTFDYKRFFHLVGLK--GKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDL 77 (109)
T ss_dssp GGGTSCHHHHHHHHHHTCS--TTCCCHHHHHHHHTCT--TCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCC
T ss_pred CCCcCCHHHHHHHHHHhCC--CCcCcHHHHHHHHhhc--cCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCCCC
Confidence 4566889999999999987 8999999999987642 3457789999999999999999999999999998 777
Q ss_pred CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 478 DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 478 ~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
++++++.+|..+|.|+||.|+|+||+.+|++
T Consensus 78 ~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 5pal_A 78 NDTETKALLAAGDSDHDGKIGADEFAKMVAQ 108 (109)
T ss_dssp CHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 8899999999999999999999999999874
|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A | Back alignment and structure |
|---|
Probab=99.69 E-value=1.3e-16 Score=128.40 Aligned_cols=102 Identities=27% Similarity=0.441 Sum_probs=92.0
Q ss_pred hcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhc---CCC
Q 010013 401 KLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY---NMG 477 (520)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~---~~~ 477 (520)
++|. +++++++.+|..+| ++|.|+|+||+.++... ....+.++.+|+.||.|++|+|+.+||+.++..+ |..
T Consensus 2 slG~-~~~~e~~~l~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~ 76 (108)
T 2pvb_A 2 SFAG-LKDADVAAALAACS--AADSFKHKEFFAKVGLA--SKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARA 76 (108)
T ss_dssp CCTT-SCHHHHHHHHHHTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCC
T ss_pred CcCC-CCHHHHHHHHHHhC--CCCcCcHHHHHHHHhCC--hhHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCC
Confidence 5778 89999999999998 78999999999987532 3456789999999999999999999999999998 665
Q ss_pred -CHHHHHHHHHHhcCCCCcceeHHHHHHHHH
Q 010013 478 -DAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507 (520)
Q Consensus 478 -~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~ 507 (520)
++++++.+|..+|.|+||.|+|+||+.+++
T Consensus 77 ~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 2pvb_A 77 LTDAETKAFLADGDKDGDGMIGVDEFAAMIK 107 (108)
T ss_dssp CCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 889999999999999999999999999886
|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A | Back alignment and structure |
|---|
Probab=99.68 E-value=1.6e-16 Score=128.09 Aligned_cols=103 Identities=28% Similarity=0.458 Sum_probs=91.7
Q ss_pred cCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhc---CCC-
Q 010013 402 LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY---NMG- 477 (520)
Q Consensus 402 ~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~---~~~- 477 (520)
+|..+++++++.++..+| ++|.|+|+||+.++... ....+.++.+|+.||.|++|+|+.+||+.++..+ |..
T Consensus 2 lg~~~t~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~ 77 (109)
T 1rwy_A 2 MTDLLSAEDIKKAIGAFT--AADSFDHKKFFQMVGLK--KKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDL 77 (109)
T ss_dssp HHHHSCHHHHHHHHHTTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCC
T ss_pred CCCcCCHHHHHHHHHHcC--CCCcEeHHHHHHHHhcC--cchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCCC
Confidence 455688999999999998 89999999999987432 3456789999999999999999999999999998 665
Q ss_pred CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 478 DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 478 ~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
++++++.+|..+|.|+||.|+|+||+.++.+
T Consensus 78 ~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 1rwy_A 78 SAKETKTLMAAGDKDGDGKIGVEEFSTLVAE 108 (109)
T ss_dssp CHHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred CHHHHHHHHHHHCCCCCCcCCHHHHHHHHHc
Confidence 8889999999999999999999999999864
|
| >1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A | Back alignment and structure |
|---|
Probab=99.67 E-value=4.5e-17 Score=169.83 Aligned_cols=133 Identities=14% Similarity=0.229 Sum_probs=65.2
Q ss_pred hhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHh
Q 010013 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452 (520)
Q Consensus 373 ~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~ 452 (520)
..+.++|+.+|.|++|.|+.+||..++..+|..+++++++.+|..+|.|++|.|+|+||+.++..... .++++.+|+
T Consensus 11 ~~l~~~F~~fD~d~dG~Is~~El~~~l~~lg~~~s~~el~~lf~~~D~d~~G~I~f~EF~~~~~~l~~---~~el~~aF~ 87 (624)
T 1djx_A 11 HWIHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYKMLTQ---RAEIDRAFE 87 (624)
T ss_dssp ---------------------------------------------------------CTTHHHHHHTC---CHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhcc---HHHHHHHHH
Confidence 36889999999999999999999999999999999999999999999999999999999998765422 357999999
Q ss_pred hhcCCCCCceeHHHHHHHHHhc-CCC--CHHHHHHHHHHhcCC----CCcceeHHHHHHHHHcC
Q 010013 453 YFDKDNSGYITMEELEHALKKY-NMG--DAKTIKEIIAEVDID----NDGRINYEEFAAMMRKG 509 (520)
Q Consensus 453 ~~D~d~dG~I~~~El~~~l~~~-~~~--~~~~~~~~~~~~d~~----~dg~i~~~ef~~~l~~~ 509 (520)
.||.+ +|+|+.+||+++|... |.. ++++++++|..+|.| ++|.|+|+||+.+|...
T Consensus 88 ~fD~~-~G~Is~~EL~~fL~~~qge~~ls~ee~~~ii~~~d~d~~~~~dG~Is~deF~~~L~s~ 150 (624)
T 1djx_A 88 EAAGS-AETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLSA 150 (624)
T ss_dssp HHHTT-SSSEEHHHHHHHHHHTSCCSSCSHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHHST
T ss_pred HhcCC-CCeecHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCChhhccCCCCCHHHHHHHhcCc
Confidence 99986 9999999999999975 543 788999999999998 79999999999999863
|
| >1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A | Back alignment and structure |
|---|
Probab=99.66 E-value=1.8e-16 Score=128.11 Aligned_cols=104 Identities=23% Similarity=0.448 Sum_probs=92.8
Q ss_pred hcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhc---CCC
Q 010013 401 KLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY---NMG 477 (520)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~---~~~ 477 (520)
++|..++.++++.++..+| ++|.|+|+||+.++.. .......++.+|+.||.|++|+|+.+||+.++..+ |..
T Consensus 2 alG~~~t~~e~~~~~~~~d--~~g~i~~~ef~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~ 77 (110)
T 1pva_A 2 AAKDLLKADDIKKALDAVK--AEGSFNHKKFFALVGL--KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRD 77 (110)
T ss_dssp CHHHHSCHHHHHHHHHHTC--STTCCCHHHHHHHHTC--TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCC
T ss_pred cccccCCHHHHHHHHHhcC--CCCcCcHHHHHHHHcc--CcchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCCC
Confidence 4677789999999999998 8899999999998743 23456789999999999999999999999999998 665
Q ss_pred -CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 478 -DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 478 -~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
++++++.+|..+|.|+||.|+|+||+.++..
T Consensus 78 ~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 109 (110)
T 1pva_A 78 LTDAETKAFLKAADKDGDGKIGIDEFETLVHE 109 (110)
T ss_dssp CCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred CCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence 8899999999999999999999999999864
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=99.66 E-value=5.8e-16 Score=138.50 Aligned_cols=124 Identities=19% Similarity=0.296 Sum_probs=111.1
Q ss_pred hhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHh
Q 010013 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452 (520)
Q Consensus 373 ~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~ 452 (520)
.++..+|+.+|.|++|.|+.+||..++... .++..+|..+|.|++|.|+.+||..++.......+.+.+..+|+
T Consensus 63 ~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~------~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~ 136 (191)
T 1y1x_A 63 ATTEKLLHMYDKNHSGEITFDEFKDLHHFI------LSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMR 136 (191)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHHHHH------HHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCeEcHHHHHHHHHHH------HHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 346678899999999999999999988753 67899999999999999999999998887666667888999999
Q ss_pred hhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcc--eeHHHHHHHHH
Q 010013 453 YFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGR--INYEEFAAMMR 507 (520)
Q Consensus 453 ~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~--i~~~ef~~~l~ 507 (520)
.+|.|++|.|+.+||..++... ..+.++|..+|.|+||. ++|+||+.++.
T Consensus 137 ~~D~d~dg~i~~~eF~~~~~~~-----~~~~~~F~~~D~d~dG~i~~~~~eF~~~~~ 188 (191)
T 1y1x_A 137 KFDRQRRGSLGFDDYVELSIFV-----CRVRNVFAFYDRERTGQVTFTFDTFIGGSV 188 (191)
T ss_dssp HHCTTCSSSBCHHHHHHHHHHH-----HHHHHHHHHHCTTCCSEEEEEHHHHHHHHH
T ss_pred HhCCCCCCeEeHHHHHHHHHHH-----HHHHHHHHHhCcCCCceEEeeHHHHHHHHH
Confidence 9999999999999999999764 67899999999999999 78999999875
|
| >1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A | Back alignment and structure |
|---|
Probab=99.66 E-value=2.9e-16 Score=126.37 Aligned_cols=102 Identities=23% Similarity=0.418 Sum_probs=90.7
Q ss_pred cCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhc---CCC-
Q 010013 402 LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY---NMG- 477 (520)
Q Consensus 402 ~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~---~~~- 477 (520)
++..+++++++.+|..+| ++|.|+|+||+.++.. .....+.++.+|+.||.|++|+|+.+||+.++..+ |..
T Consensus 2 l~~~~t~~e~~~~~~~~d--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~ 77 (108)
T 1rro_A 2 ITDILSAEDIAAALQECQ--DPDTFEPQKFFQTSGL--SKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDAREL 77 (108)
T ss_dssp GGGTSCHHHHHHHHHHTC--STTCCCHHHHHHHHSG--GGSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCC
T ss_pred ccccCCHHHHHHHHHHcc--CCCCcCHHHHHHHHhc--CcccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccCCC
Confidence 456789999999999998 8999999999998743 23456789999999999999999999999999998 455
Q ss_pred CHHHHHHHHHHhcCCCCcceeHHHHHHHHH
Q 010013 478 DAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507 (520)
Q Consensus 478 ~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~ 507 (520)
++++++.+|..+|.|+||.|+|+||+.+|.
T Consensus 78 ~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 1rro_A 78 TESETKSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp CHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred CHHHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence 888999999999999999999999999885
|
| >2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A | Back alignment and structure |
|---|
Probab=99.66 E-value=2.9e-16 Score=142.43 Aligned_cols=126 Identities=20% Similarity=0.247 Sum_probs=113.2
Q ss_pred ccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCC-CCCceehhhhHHHhhccchh-hhHHHHHHHHhhhcCCC
Q 010013 381 SMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVD-GNGTIDYIEFITATMHMNRV-EREEHLYKAFEYFDKDN 458 (520)
Q Consensus 381 ~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~-~~g~i~~~ef~~~~~~~~~~-~~~~~~~~~F~~~D~d~ 458 (520)
.|+.+++|.|+.+|+..++..++ ++.++++.+|..+|.+ ++|.|+++||..++...... .....+..+|+.+|.|+
T Consensus 7 ~mg~~~~g~l~~~el~~~~~~~~--~~~~~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~ 84 (207)
T 2d8n_A 7 GMGNSKSGALSKEILEELQLNTK--FSEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNL 84 (207)
T ss_dssp -CTTCCTTCCCHHHHHHHHHHSS--CCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTC
T ss_pred hhccccCCCCCHHHHHHHHHHcC--CCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCC
Confidence 47899999999999999999887 5899999999999998 79999999999988765432 56778999999999999
Q ss_pred CCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 459 SGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 459 dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
+|.|+.+||..++..++.. ..+++..+|..+|.|++|.|+++||..++..
T Consensus 85 ~G~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~l~~ 135 (207)
T 2d8n_A 85 DGTLDFKEYVIALHMTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVMA 135 (207)
T ss_dssp CSEEEHHHHHHHHHHHSCSSSSTTHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred CCeEeHHHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeEcHHHHHHHHHH
Confidence 9999999999999988765 6678999999999999999999999999875
|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A | Back alignment and structure |
|---|
Probab=99.65 E-value=1e-15 Score=134.45 Aligned_cols=124 Identities=19% Similarity=0.354 Sum_probs=109.9
Q ss_pred hHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhh
Q 010013 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEY 453 (520)
Q Consensus 374 ~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~ 453 (520)
.+..+|+.+|.|++|.|+.+||..++..+ .++..+|..+|.|++|.|+.+||..++.......+.+.+..+|+.
T Consensus 45 ~~~~l~~~~D~~~~g~i~~~ef~~~~~~~------~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~ 118 (172)
T 2znd_A 45 TVRSIISMFDRENKAGVNFSEFTGVWKYI------TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRK 118 (172)
T ss_dssp HHHHHHHHHCSSSSSEECHHHHHHHHHHH------HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHHCCCCCCccCHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence 45677889999999999999999988653 678999999999999999999999988766555677889999999
Q ss_pred hcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCccee--HHHHHHHHHc
Q 010013 454 FDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRIN--YEEFAAMMRK 508 (520)
Q Consensus 454 ~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i~--~~ef~~~l~~ 508 (520)
+|.|++|.|+.+||..++... +.+..+|+.+|.|+||.|+ ++||+.++..
T Consensus 119 ~d~~~dg~i~~~eF~~~~~~~-----~~~~~~F~~~D~d~dG~i~~~~~ef~~~~~~ 170 (172)
T 2znd_A 119 FDRQGRGQIAFDDFIQGCIVL-----QRLTDIFRRYDTDQDGWIQVSYEQYLSMVFS 170 (172)
T ss_dssp HCTTCSSSEEHHHHHHHHHHH-----HHHHHHHHHHCTTSSSCCCCCHHHHHHHHHT
T ss_pred hCCCCCCcCcHHHHHHHHHHH-----HHHHHHHHHhCCCCCCeEeeeHHHHHHHHHh
Confidence 999999999999999999764 6789999999999999995 8999988754
|
| >2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.2e-15 Score=133.61 Aligned_cols=122 Identities=13% Similarity=0.194 Sum_probs=107.2
Q ss_pred hhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc----chhhhHHHHH
Q 010013 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM----NRVEREEHLY 448 (520)
Q Consensus 373 ~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~----~~~~~~~~~~ 448 (520)
.++..+|+.+|.|++|.|+.+||..++..+ .+++.+|..+| |++|.|+.+||..++... ....+.+.+.
T Consensus 46 ~~~~~l~~~~D~d~~G~I~f~EF~~~~~~~------~~l~~aF~~fD-d~~G~I~~~El~~~l~~l~~~~G~~~~~~~~~ 118 (174)
T 2i7a_A 46 DECRSLVALMELKVNGRLDQEEFARLWKRL------VHYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFISRELLH 118 (174)
T ss_dssp HHHHHHHHHHCSSCSSEECHHHHHHHHHHH------HHHHHHHHHHC-SBTTBEEGGGHHHHHHTCGGGTTCCCCHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHhc-CCCCcCCHHHHHHHHHHhHhccCCCCCHHHHH
Confidence 346788899999999999999999987653 57999999999 999999999999988776 5556788899
Q ss_pred HHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCc-ceeHHHHHHHHH
Q 010013 449 KAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDG-RINYEEFAAMMR 507 (520)
Q Consensus 449 ~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg-~i~~~ef~~~l~ 507 (520)
.+++.+| |++|.|+++||..++... +.+.++|+.+|.|++| .++++||+.++.
T Consensus 119 ~l~~~~d-d~dG~I~~~EF~~~~~~~-----~~~~~~F~~~D~d~~GI~~~~~Ef~~~~~ 172 (174)
T 2i7a_A 119 LVTLRYS-DSVGRVSFPSLVCFLMRL-----EAMAKTFRNLSKDGKGLYLTEMEWMSLVM 172 (174)
T ss_dssp HHHHHHS-CTTSEECHHHHHHHHHHH-----HHHHHHHHHHCSSSSCCCCCHHHHHHHHH
T ss_pred HHHHHHc-CCCCeEcHHHHHHHHHHH-----HHHHHHHHHhCCCCCCceecHHHHHHHHH
Confidence 9999999 999999999999998754 5689999999999999 449999998753
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 | Back alignment and structure |
|---|
Probab=99.64 E-value=2.7e-16 Score=173.14 Aligned_cols=134 Identities=25% Similarity=0.401 Sum_probs=108.7
Q ss_pred hhHHH-HhhHHHHhcccCCCCCCcccHHHHhhhhhhcCC--------CCCHHHHHHHHHHhcCCCCCceehhhhHHHhhc
Q 010013 367 LSEEE-IMGLKEMFKSMDTDNSGTITFEELKAGLPKLGT--------RLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (520)
Q Consensus 367 ~~~~~-~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~--------~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 437 (520)
+++++ ++++.++|..+| +++|.|+.+||..+|..++. .++.++++.+|..+|.|++|.|+|+||+.++..
T Consensus 527 l~~~e~~~~l~~~F~~~D-~~dG~Is~~El~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d~~G~I~~~EF~~~~~~ 605 (900)
T 1qxp_A 527 LSEEEIDDNFKTLFSKLA-GDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNR 605 (900)
T ss_dssp --------------CCCC-CSSSSCCCSCTTTTTCC---------CCCCCHHHHHHHHHHHCC--CCCCCSSSHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHc-CCCCcCCHHHHHHHHHHhhcccccccCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence 44444 789999999999 99999999999999999875 789999999999999999999999999998754
Q ss_pred cchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 438 MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 438 ~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
. +.++.+|+.||.|++|+|+.+||+.++..+|.. ++++++.++..+| |+||.|+|+||+.++..
T Consensus 606 ~------~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~l~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~ 670 (900)
T 1qxp_A 606 I------RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVR 670 (900)
T ss_dssp H------HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHHTS-CSSSBCCHHHHHHHHHH
T ss_pred H------HHHHHHHHhhCCCCCCeECHHHHHHHHHHhCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHH
Confidence 3 679999999999999999999999999999877 8889999999999 99999999999998863
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.64 E-value=4e-16 Score=130.96 Aligned_cols=99 Identities=20% Similarity=0.337 Sum_probs=67.9
Q ss_pred HHHHHHHHhcCCCCCceehhhhHHHhhc-cchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCC-C-CHHHHHHHH
Q 010013 410 EVRQLMEAADVDGNGTIDYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNM-G-DAKTIKEII 486 (520)
Q Consensus 410 ~~~~~~~~~d~~~~g~i~~~ef~~~~~~-~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~-~-~~~~~~~~~ 486 (520)
.++.+|..+|.|++|.|+|+||+.++.. .......+.++.+|+.||+|++|+|+.+||+.++..+|. . ++++++.+|
T Consensus 4 ~~~~l~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~ 83 (135)
T 3h4s_E 4 TEKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMV 83 (135)
T ss_dssp ---------------CCCC-----------CHHHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCCHHHHHHHH
T ss_pred hHHHHHHHHcCCCCCcEeHHHHHHHHHHHccccchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHH
Confidence 3467899999999999999999998764 333445678999999999999999999999999999994 6 889999999
Q ss_pred HHhcCCCCcceeHHHHHHHHHc
Q 010013 487 AEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 487 ~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..+|.|+||.|+|+||+.+|..
T Consensus 84 ~~~D~d~dG~I~~~EF~~~~~~ 105 (135)
T 3h4s_E 84 REGDLDGDGALNQTEFCVLMVR 105 (135)
T ss_dssp HHHCSSCSSSBCHHHHHHHHHH
T ss_pred HHhCCCCCCCCcHHHHHHHHHH
Confidence 9999999999999999999976
|
| >1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1 | Back alignment and structure |
|---|
Probab=99.63 E-value=2.7e-16 Score=173.25 Aligned_cols=137 Identities=20% Similarity=0.424 Sum_probs=123.1
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccc-hhhh
Q 010013 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN-RVER 443 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~-~~~~ 443 (520)
..++.+++.++..+|+.||.|++|+|+.+||..++..+|..++.+++..+|..+|.|++|.|+|+||+.++.... ....
T Consensus 717 ~~l~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~ 796 (863)
T 1sjj_A 717 KGISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRETADTDT 796 (863)
T ss_dssp CCSSHHHHHHHHHHHTTTCSSSSSEEESTTHHHHHHHHTCCCCTHHHHHHHHHHCTTSCSEEETTHHHHTHHHHSTTCSS
T ss_pred cCCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCC
Confidence 456778899999999999999999999999999999999999999999999999999999999999999876432 2344
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCC-----CCcceeHHHHHHHHHc
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDID-----NDGRINYEEFAAMMRK 508 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~-----~dg~i~~~ef~~~l~~ 508 (520)
.+.+..+|+.| .|++|+|+.+||+.++. +++++.+|..+|.+ +||.|+|+||+.+|..
T Consensus 797 ~~~l~~aF~~~-~d~~G~Is~~El~~~l~------~~~~~~l~~~~d~~~~~~~~dg~I~~~eF~~~~~~ 859 (863)
T 1sjj_A 797 ADQVMASFKIL-AGDKNYITVDELRRELP------PDQAEYCIARMAPYNGRDAVPGALDYMSFSTALYG 859 (863)
T ss_dssp SHHHHHHHHGG-GTSSSEEEHHHHHHHSC------HHHHHHHHHHSEECCSSCCCTTEEESHHHHHHHSC
T ss_pred HHHHHHHHHHH-hCCCCcCcHHHHHHHCC------HHHHHHHHHHcchhcCCCCCCCceeHHHHHHHHhc
Confidence 56799999999 89999999999999883 67899999999987 7999999999999976
|
| >1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A | Back alignment and structure |
|---|
Probab=99.59 E-value=1e-14 Score=128.18 Aligned_cols=122 Identities=20% Similarity=0.300 Sum_probs=106.4
Q ss_pred hhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHh
Q 010013 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452 (520)
Q Consensus 373 ~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~ 452 (520)
..+..+|+.+|.|++|.|+.+||..++..+ +++..+|..+|.|++|.|+.+||..++.......+.+.+..+|+
T Consensus 47 ~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~ 120 (173)
T 1alv_A 47 DTCRSMVAVMDSDTTGKLGFEEFKYLWNNI------KKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIR 120 (173)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCccCHHHHHHHHHHH------HHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence 456788899999999999999999988753 67999999999999999999999998876655567788999999
Q ss_pred hhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcceeHHHHHHHHH
Q 010013 453 YFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507 (520)
Q Consensus 453 ~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~ 507 (520)
.+| |++|.|+.+||..++... +.+..+|+.+|.|++|.|+.+ |.++|.
T Consensus 121 ~~d-d~dg~i~~~eF~~~~~~~-----~~~~~~F~~~D~d~~G~i~~~-~~~~l~ 168 (173)
T 1alv_A 121 RYS-DEGGNMDFDNFISCLVRL-----DAMFRAFKSLDKDGTGQIQVN-IQEWLQ 168 (173)
T ss_dssp HHT-CSSSCBCHHHHHHHHHHH-----HHHHHHHHHHSSSCCSEEEEE-HHHHHH
T ss_pred Hhc-CCCCcCcHHHHHHHHHHH-----HHHHHHHHHhCCCCCCeecHh-HHHHHH
Confidence 999 999999999999998764 678999999999999999866 555543
|
| >3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A | Back alignment and structure |
|---|
Probab=99.58 E-value=5.1e-15 Score=135.37 Aligned_cols=123 Identities=14% Similarity=0.143 Sum_probs=108.3
Q ss_pred hHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhh
Q 010013 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEY 453 (520)
Q Consensus 374 ~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~ 453 (520)
.+..+|+.+|.|++|.|+.+||..++..+ +++..+|..+|.|++|.|+.+||..++.......+.+.+..+|+.
T Consensus 88 ~~~~l~~~~D~d~dg~I~~~EF~~~~~~~------~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~ 161 (220)
T 3sjs_A 88 TALRMMRIFDTDFNGHISFYEFMAMYKFM------ELAYNLFVMNARARSGTLEPHEILPALQQLGFYINQRTSLLLHRL 161 (220)
T ss_dssp HHHHHHHHHCTTCSSCBCHHHHHHHHHHH------HHHHHHHHHHCCSSTTEECHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHHCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 46778888999999999999999988764 679999999999999999999999988876666677889999999
Q ss_pred hcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHh-cCCCCc------ceeHHHHHHHHHc
Q 010013 454 FDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEV-DIDNDG------RINYEEFAAMMRK 508 (520)
Q Consensus 454 ~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~-d~~~dg------~i~~~ef~~~l~~ 508 (520)
+| |+||.|+.+||.+++..+ ..+.++|+.+ |.+++| .|+|+||+.++..
T Consensus 162 ~d-d~dg~I~~~eF~~~~~~l-----~~~~~~F~~~~D~~~~G~i~~~~~i~~~ef~~~~~~ 217 (220)
T 3sjs_A 162 FA-RGMAFCDLNCWIAICAFA-----AQTRSAYQMIFMNPYYGPMKPFNPMEFGKFLDVVTS 217 (220)
T ss_dssp HC---CCSEEHHHHHHHHHHH-----HHHHHHHHHHHTSGGGCSCCCCCHHHHHHHHHHHHH
T ss_pred hc-CCCCcCcHHHHHHHHHHH-----HHHHHHHHHhcccCCCCCcccccceeHHHHHHHHHH
Confidence 99 999999999999999765 3688999999 999999 8999999998764
|
| >2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A | Back alignment and structure |
|---|
Probab=99.57 E-value=2e-16 Score=127.38 Aligned_cols=102 Identities=26% Similarity=0.418 Sum_probs=89.9
Q ss_pred cCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhc---CCC-
Q 010013 402 LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY---NMG- 477 (520)
Q Consensus 402 ~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~---~~~- 477 (520)
++..+++++++.+|..+| ++|.|+|+||+.++... ....+.++.+|+.||.|++|+|+.+||+.++..+ +..
T Consensus 2 l~~~~~~~e~~~l~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~ 77 (108)
T 2kyc_A 2 LTDILSPSDIAAALRDCQ--APDSFSPKKFFQISGMS--KKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVL 77 (108)
T ss_dssp TTSSSCHHHHHHHHTTSC--STTTCCHHHHHHHHTCT--TCCSSSHHHHCSSSCSCCSSCCCGGGTTTSHHHHSSSCCCC
T ss_pred ccccCCHHHHHHHHHHcC--CCCcCCHHHHHHHHhhC--cccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhccCCC
Confidence 566789999999999998 89999999999987432 2345678999999999999999999999999988 655
Q ss_pred CHHHHHHHHHHhcCCCCcceeHHHHHHHHH
Q 010013 478 DAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507 (520)
Q Consensus 478 ~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~ 507 (520)
++++++.+|..+|.|+||.|+|+||+.+|+
T Consensus 78 ~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 107 (108)
T 2kyc_A 78 TASETKTFLAAADHDGDGKIGAEEFQEMVQ 107 (108)
T ss_dssp CTTTTHHHHTTTCCSSSSCCCSSHHHHHHH
T ss_pred CHHHHHHHHHHhCCCCCCcCCHHHHHHHHh
Confidence 777899999999999999999999999886
|
| >2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.3e-14 Score=129.59 Aligned_cols=122 Identities=20% Similarity=0.304 Sum_probs=108.2
Q ss_pred CCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCC-CCCceehhhhHHHhhccch-hhhHHHHHHHHhhhcCCCCCce
Q 010013 385 DNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVD-GNGTIDYIEFITATMHMNR-VEREEHLYKAFEYFDKDNSGYI 462 (520)
Q Consensus 385 ~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~-~~g~i~~~ef~~~~~~~~~-~~~~~~~~~~F~~~D~d~dG~I 462 (520)
+.+|.|+.+++..+...++ ++.++++.+|..+|.+ ++|.|+++||..++..... ......+..+|+.+|.|++|.|
T Consensus 3 ~~~~~l~~~el~~~~~~~~--~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i 80 (190)
T 2l2e_A 3 KSQSKLSQDQLQDLVRSTR--FDKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYI 80 (190)
T ss_dssp CSSCCSCHHHHHHHHHHHC--SCSHHHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSSTTCE
T ss_pred cccccCCHHHHHHHHHhcC--CCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCeE
Confidence 4578999999999988865 5788999999999999 8999999999998875422 2456789999999999999999
Q ss_pred eHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 463 TMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 463 ~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
+.+||..++..++.. ..+++..+|..+|.|++|.|+++||..++..
T Consensus 81 ~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~ 127 (190)
T 2l2e_A 81 DFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDA 127 (190)
T ss_dssp EHHHHHHHHTTSSCSCSHHHHHHHHHHHCTTSCSCBCHHHHHHHHHH
T ss_pred eHHHHHHHHHHHcCCCHHHHHHHHHhHccCCCCCcCcHHHHHHHHHH
Confidence 999999999988776 7888999999999999999999999999865
|
| >1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.55 E-value=7.2e-15 Score=131.50 Aligned_cols=119 Identities=23% Similarity=0.391 Sum_probs=95.7
Q ss_pred hhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc----c------h--
Q 010013 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM----N------R-- 440 (520)
Q Consensus 373 ~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~----~------~-- 440 (520)
..+..+|+.+|.|++|.|+.+||..++..++...+.+++..+|..+|.|++|.|+++||..++... . .
T Consensus 63 ~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~~ 142 (193)
T 1bjf_A 63 KFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDE 142 (193)
T ss_dssp HHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGG
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCHHHHHHHHHhhcCCCCCCeECHHHHHHHHHHHHHHhccccCCCccc
Confidence 346889999999999999999999999988887888899999999999999999999999877532 1 0
Q ss_pred hhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcce
Q 010013 441 VEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRI 497 (520)
Q Consensus 441 ~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i 497 (520)
......+..+|+.+|.|++|.|+.+||..++.. ..++.++| .+|.|+||.|
T Consensus 143 ~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~-----~~~~~~~~-~~D~~~dG~i 193 (193)
T 1bjf_A 143 STPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKS-----DPSIVRLL-QCDPSSAGQF 193 (193)
T ss_dssp SSHHHHHHHHHHHSCTTCSSEECHHHHHHHHHH-----CTHHHHTT-CC--------
T ss_pred ccHHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc-----CHHHHHHh-ccCCCCCCCC
Confidence 123567999999999999999999999999974 24688999 9999999986
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=99.54 E-value=2.7e-14 Score=124.60 Aligned_cols=120 Identities=24% Similarity=0.315 Sum_probs=104.8
Q ss_pred hhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHh
Q 010013 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452 (520)
Q Consensus 373 ~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~ 452 (520)
.++..+|+.+|.|++|.|+.+||..++... +++..+|..+|.|++|.|+.+||..++.......+.+.+..+|+
T Consensus 42 ~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~ 115 (167)
T 1gjy_A 42 ETCRLMVSMLDRDMSGTMGFNEFKELWAVL------NGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAK 115 (167)
T ss_dssp HHHHHHHHHHCTTCCSCBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSEECHHHHHHHHHTTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence 346788999999999999999999988764 68999999999999999999999998877665567788999999
Q ss_pred hhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcceeHH--HHHHH
Q 010013 453 YFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYE--EFAAM 505 (520)
Q Consensus 453 ~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i~~~--ef~~~ 505 (520)
.+ |++|.|+.+||..++... ..+.++|..+|.|++|.|+.+ +|+.+
T Consensus 116 ~~--d~dg~i~~~eF~~~~~~~-----~~~~~~F~~~D~d~~G~i~~~~~~~l~~ 163 (167)
T 1gjy_A 116 RY--STSGKITFDDYIACCVKL-----RALTDSFRRRDSAQQGMVNFSYDDFIQC 163 (167)
T ss_dssp HT--CBTTBEEHHHHHHHHHHH-----HHHHHHHHHHCTTCCSEEEEEHHHHHHH
T ss_pred Hh--CcCCcCcHHHHHHHHHHH-----HHHHHHHHHhCCCCCeeEEeeHHHHHHH
Confidence 99 899999999999999765 678999999999999999965 55544
|
| >2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.4e-14 Score=131.77 Aligned_cols=127 Identities=22% Similarity=0.401 Sum_probs=107.1
Q ss_pred HHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccc------hhhh
Q 010013 370 EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN------RVER 443 (520)
Q Consensus 370 ~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~------~~~~ 443 (520)
.....+.++|+.+|.|++|.|+.+||..++..++.....+++..+|..+|.|++|.|+++||..++.... ....
T Consensus 54 ~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~ 133 (211)
T 2ggz_A 54 KANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSP 133 (211)
T ss_dssp HHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHTTSSCCCSCTH
T ss_pred chHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCccccH
Confidence 3445688999999999999999999999999888778888999999999999999999999999876542 2234
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.+.+..+|+.+|.|+||.|+.+||..++... .++.++|.. .++|+||+.+|..
T Consensus 134 ~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~-----~~~~~~~~~-------~~d~~~f~~~~~~ 186 (211)
T 2ggz_A 134 EEFINLVFHKIDINNDGELTLEEFINGMAKD-----QDLLEIVYK-------SFDFSNVLRVICN 186 (211)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHTT-----TTTHHHHHH-------HSCTTHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCCcHHHHHHHHHhC-----HHHHHHHhc-------cCCHHHHHHHHhc
Confidence 5668999999999999999999999999742 346667763 3459999999986
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A | Back alignment and structure |
|---|
Probab=99.53 E-value=2.6e-14 Score=124.41 Aligned_cols=121 Identities=18% Similarity=0.303 Sum_probs=105.6
Q ss_pred hhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHh
Q 010013 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452 (520)
Q Consensus 373 ~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~ 452 (520)
.++..+|+.+|.|++|.|+.+||..++... +++..+|..+|.|++|.|+.+||..++.......+.+.+..+|+
T Consensus 40 ~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~ 113 (165)
T 1k94_A 40 ETCRIMIAMLDRDHTGKMGFNAFKELWAAL------NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVK 113 (165)
T ss_dssp HHHHHHHHHHCTTCSSCBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHhCCCCCceECHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 356788999999999999999999988663 67999999999999999999999998877665567788999999
Q ss_pred hhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcceeHHHHHHHHH
Q 010013 453 YFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507 (520)
Q Consensus 453 ~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~ 507 (520)
.+ |++|.|+.+||..++... +.+.++|..+|.|++|.|+.+ |.++|.
T Consensus 114 ~~--d~dg~i~~~eF~~~~~~~-----~~~~~~F~~~D~d~~G~i~~~-~~~~l~ 160 (165)
T 1k94_A 114 RY--SKNGRIFFDDYVACCVKL-----RALTDFFRKRDHLQQGSANFI-YDDFLQ 160 (165)
T ss_dssp HH--CBTTBCBHHHHHHHHHHH-----HHHHHHHHTTCTTCCSEEEEE-HHHHHH
T ss_pred Hh--CCCCeEcHHHHHHHHHHH-----HHHHHHHHHhCCCCCCeEeee-HHHHHH
Confidence 99 899999999999999765 678999999999999999776 666554
|
| >2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B | Back alignment and structure |
|---|
Probab=99.52 E-value=2.1e-14 Score=153.42 Aligned_cols=131 Identities=12% Similarity=0.204 Sum_probs=100.1
Q ss_pred HHhhHHHHhc--ccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcC-------CCCCceehhhhHHHhhccchh
Q 010013 371 EIMGLKEMFK--SMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADV-------DGNGTIDYIEFITATMHMNRV 441 (520)
Q Consensus 371 ~~~~l~~~F~--~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~-------~~~g~i~~~ef~~~~~~~~~~ 441 (520)
....+.++|. .||.|++|.|+.+|+..+|.. .+++++.+++.+|. +++|.|+|+||+.++....
T Consensus 144 ~~~~Lk~~F~~~~fD~d~dG~Is~~EL~~~l~~-----~~~ev~~li~~~d~~~~~~D~d~~g~idf~EF~~~~~~l~-- 216 (799)
T 2zkm_X 144 RSTFLDKILVKLKMQLNSEGKIPVKNFFQMFPA-----DRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLC-- 216 (799)
T ss_dssp HHHHHHHHHHHHHHSCCTTSCEEHHHHHHHSCS-----CHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHS--
T ss_pred HHHHHHHHhHHhccCCCCCCeECHHHHHHHHhh-----hHHHHHHHHHHhCcCccccccCCCCcCCHHHHHHHHHHcc--
Confidence 3456889999 799999999999999999876 46899999999985 7889999999999876543
Q ss_pred hhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhc-CCC----------CHHHHHHHHHHhcCC----CCcceeHHHHHHHH
Q 010013 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKY-NMG----------DAKTIKEIIAEVDID----NDGRINYEEFAAMM 506 (520)
Q Consensus 442 ~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~-~~~----------~~~~~~~~~~~~d~~----~dg~i~~~ef~~~l 506 (520)
..++++.+|+.||.|++|+||.+||+.+|... |.. +++++++++..+|.| +||.|+|+||+.+|
T Consensus 217 -~r~el~~aF~~fD~d~~g~Is~~eL~~fL~~~Qge~~~~~~~~~~~t~ee~~~iI~~~d~d~~~~~dg~is~eeF~~~L 295 (799)
T 2zkm_X 217 -PRPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPEGMVWFL 295 (799)
T ss_dssp -CCHHHHTTCC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC--------CCHHHHHHHH
T ss_pred -CHHHHHHHHHHhccCCCCeEcHHHHHHHHHHhcCCcccccccccCCCHHHHHHHHHHhhcccccccCCccchhhhhhcc
Confidence 24679999999999999999999999999987 442 457799999999999 89999999999999
Q ss_pred HcC
Q 010013 507 RKG 509 (520)
Q Consensus 507 ~~~ 509 (520)
...
T Consensus 296 ~S~ 298 (799)
T 2zkm_X 296 CGP 298 (799)
T ss_dssp HST
T ss_pred cCc
Confidence 864
|
| >1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A | Back alignment and structure |
|---|
Probab=99.52 E-value=5.9e-14 Score=126.17 Aligned_cols=121 Identities=23% Similarity=0.323 Sum_probs=105.7
Q ss_pred hhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHh
Q 010013 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452 (520)
Q Consensus 373 ~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~ 452 (520)
.++..+|+.+|.|++|.|+.+||..++... +++..+|..+|.|++|.|+.+||..++.......+.+.+..+|+
T Consensus 73 ~~~~~l~~~~D~d~~g~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~ 146 (198)
T 1juo_A 73 ETCRLMVSMLDRDMSGTMGFNEFKELWAVL------NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAK 146 (198)
T ss_dssp HHHHHHHHHHCTTCSSCEEHHHHHHHHHHH------HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCeECHHHHHHHHHHH------HHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 346788899999999999999999988763 67999999999999999999999998876655567788999999
Q ss_pred hhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcceeH--HHHHHHH
Q 010013 453 YFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINY--EEFAAMM 506 (520)
Q Consensus 453 ~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i~~--~ef~~~l 506 (520)
.+ |++|.|+.+||..++... +.+.++|+.+|.|++|.|+. ++|+.++
T Consensus 147 ~~--d~dg~i~~~eF~~~~~~~-----~~~~~~F~~~D~d~~G~is~~~~~~l~~~ 195 (198)
T 1juo_A 147 RY--STNGKITFDDYIACCVKL-----RALTDSFRRRDTAQQGVVNFPYDDFIQCV 195 (198)
T ss_dssp HT--CSSSSEEHHHHHHHHHHH-----HHHHHHHHHTCTTCCSEEEEEHHHHHHHH
T ss_pred Hh--CCCCeEcHHHHHHHHHHH-----HHHHHHHHHhCCCCCCeEeecHHHHHHHH
Confidence 99 899999999999999765 57899999999999999987 6666554
|
| >1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A | Back alignment and structure |
|---|
Probab=99.51 E-value=5.1e-14 Score=125.59 Aligned_cols=122 Identities=20% Similarity=0.326 Sum_probs=105.8
Q ss_pred CCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCC-CCCceehhhhHHHhhccch-hhhHHHHHHHHhhhcCCCCCce
Q 010013 385 DNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVD-GNGTIDYIEFITATMHMNR-VEREEHLYKAFEYFDKDNSGYI 462 (520)
Q Consensus 385 ~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~-~~g~i~~~ef~~~~~~~~~-~~~~~~~~~~F~~~D~d~dG~I 462 (520)
++.+.|+.+++..+.... .++.++++.+|..+|.+ ++|.|+++||..++..... ......+..+|+.+|.|++|.|
T Consensus 3 ~~~~~l~~~~l~~l~~~~--~~~~~~i~~~~~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i 80 (190)
T 1fpw_A 3 AKTSKLSKDDLTCLKQST--YFDRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFI 80 (190)
T ss_dssp CCSCCSTTHHHHHHTTTC--CSTHHHHHHHHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEE
T ss_pred cccCCCCHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcE
Confidence 356789999999988765 46889999999999987 8999999999998765422 2345568999999999999999
Q ss_pred eHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 463 TMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 463 ~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
+.+||..++..++.. ..+++..+|..+|.|++|.|+++||..++..
T Consensus 81 ~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~ 127 (190)
T 1fpw_A 81 HFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVAS 127 (190)
T ss_dssp CHHHHHHHHHHHSCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHH
T ss_pred eHHHHHHHHHHHccCCcHHHHHHHHHHhcCCCCCcCcHHHHHHHHHH
Confidence 999999999988766 7788999999999999999999999999875
|
| >1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E | Back alignment and structure |
|---|
Probab=99.49 E-value=6.9e-14 Score=123.94 Aligned_cols=117 Identities=19% Similarity=0.234 Sum_probs=98.0
Q ss_pred ccHHHHhhhhhhcCCCCCHHHHHHHHHHhcC-CCCCceehhhhHHHhhccchh-hhHHHHHHHHhhhcCCCCCceeHHHH
Q 010013 390 ITFEELKAGLPKLGTRLSESEVRQLMEAADV-DGNGTIDYIEFITATMHMNRV-EREEHLYKAFEYFDKDNSGYITMEEL 467 (520)
Q Consensus 390 i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~-~~~g~i~~~ef~~~~~~~~~~-~~~~~~~~~F~~~D~d~dG~I~~~El 467 (520)
|+.+|+..++...+ ++.+++..++..+|. |++|.|+++||..++...... .+...+..+|+.+|.|++|.|+.+||
T Consensus 1 l~~~el~~l~~~~~--~s~~~i~~l~~~fd~~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef 78 (183)
T 1s6c_A 1 HRPEGLEQLEAQTN--FTKRELQVLYRGFKNEXPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDF 78 (183)
T ss_dssp -----CHHHHHHSS--CCHHHHHHHHHHHHHHCTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHH
T ss_pred CChHHHHHHHHhcC--CCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHH
Confidence 45677777776654 588899999999998 899999999999988765443 56788999999999999999999999
Q ss_pred HHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 468 EHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 468 ~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..++..++.. ..+++..+|..+|.|++|.|+++||..++..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~ 120 (183)
T 1s6c_A 79 VTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA 120 (183)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 9999877655 6678999999999999999999999999875
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 | Back alignment and structure |
|---|
Probab=99.49 E-value=5.5e-14 Score=154.79 Aligned_cols=134 Identities=22% Similarity=0.383 Sum_probs=104.2
Q ss_pred hhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccch------------
Q 010013 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNR------------ 440 (520)
Q Consensus 373 ~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~------------ 440 (520)
.++..+|+.+|.|++|+|+.+||..++..+|..++.++++.++..+| |++|.|+|+||+.++.....
T Consensus 607 ~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~l~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~~~~l~~~F~~~D~d~ 685 (900)
T 1qxp_A 607 RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVRLEILFKIFKQLDPEN 685 (900)
T ss_dssp HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHHTS-CSSSBCCHHHHHHHHHHHHHHHHHHHHSCSSC
T ss_pred HHHHHHHHhhCCCCCCeECHHHHHHHHHHhCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 67899999999999999999999999999999999999999999999 99999999999987642200
Q ss_pred -----------------------------------------hhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCC---
Q 010013 441 -----------------------------------------VEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNM--- 476 (520)
Q Consensus 441 -----------------------------------------~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~--- 476 (520)
......++.+|+.+|.+ +|.|+.+||+.++..++.
T Consensus 686 ~G~It~~~~efl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~-~G~Is~~El~~~L~~~~~~~~ 764 (900)
T 1qxp_A 686 TGTIQLDLISWLSFSVLGKLAAAIEHHHHHHMHYSNIEANESEEERQFRKLFVQLAGD-DMEVSATELMNILNKVVTRHP 764 (900)
T ss_dssp CSCEEEEHHHHHHHTCC--------------CCCCCC--------------CCCCTTC-SSCBCHHHHTTTSCC----CC
T ss_pred CceEEecHHHHHHHhhhccccccccccccccccccCCCCCChHHHHHHHHHHHHhcCC-CCccCHHHHHHHHHHhccccc
Confidence 00112344455555554 556688888888876552
Q ss_pred -----C-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 477 -----G-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 477 -----~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
. +.+.++.+|+.+|.|+||.|+|+||..++..
T Consensus 765 ~~~~~~~s~~~~~~l~~~~D~d~dG~Is~~EF~~l~~~ 802 (900)
T 1qxp_A 765 DLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNN 802 (900)
T ss_dssp SCC--CCCHHHHHHHHHHHCCSSSSSBCSHHHHHHHHH
T ss_pred ccccCCCCHHHHHHHHHHHCCCCCCeECHHHHHHHHHH
Confidence 2 6688999999999999999999999998854
|
| >3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C | Back alignment and structure |
|---|
Probab=99.48 E-value=1.9e-14 Score=121.79 Aligned_cols=95 Identities=20% Similarity=0.262 Sum_probs=49.0
Q ss_pred HHHHHhcCCCCCceehhhhHHHhhccc-----hhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcC--------CC-C
Q 010013 413 QLMEAADVDGNGTIDYIEFITATMHMN-----RVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYN--------MG-D 478 (520)
Q Consensus 413 ~~~~~~d~~~~g~i~~~ef~~~~~~~~-----~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~--------~~-~ 478 (520)
.+|..+|.|++|.|+++||+.++.... .....+.++.+|+.||.|++|+|+.+||+.++..++ .. +
T Consensus 31 ~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~g~~~s 110 (143)
T 3a4u_B 31 SQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMS 110 (143)
T ss_dssp --------------------------------CCCHHHHHHHHHHHTCTTCSSCEEHHHHHHTCC-------------CC
T ss_pred HHHHHhCCCCCCcCcHHHHHHHHHHHhcccccccCHHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhccccCCCCC
Confidence 455555666666666666655443221 113456788889999999999999999998887763 23 5
Q ss_pred HHHHH----HHHHHhcCCCCcceeHHHHHHHHH
Q 010013 479 AKTIK----EIIAEVDIDNDGRINYEEFAAMMR 507 (520)
Q Consensus 479 ~~~~~----~~~~~~d~~~dg~i~~~ef~~~l~ 507 (520)
.+++. .+|..+|.|+||.|+|+||+.+|+
T Consensus 111 ~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~ 143 (143)
T 3a4u_B 111 EDELINIIDGVLRDDDKNNDGYIDYAEFAKSLQ 143 (143)
T ss_dssp HHHHHHHHHHHHHHHCTTCSSEECHHHHHC---
T ss_pred HHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHHC
Confidence 66664 455999999999999999998763
|
| >1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A | Back alignment and structure |
|---|
Probab=99.46 E-value=7.1e-13 Score=121.08 Aligned_cols=135 Identities=14% Similarity=0.222 Sum_probs=106.2
Q ss_pred HhhHHHHhcccCC-CCCCcccHHHHhhhhhhcCCC--------CC-----HHHHHHHHHHhcCCCCCceehhhhHHHhhc
Q 010013 372 IMGLKEMFKSMDT-DNSGTITFEELKAGLPKLGTR--------LS-----ESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (520)
Q Consensus 372 ~~~l~~~F~~~D~-~~~g~i~~~e~~~~l~~~~~~--------~~-----~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 437 (520)
+..+.++|+...- .++..|+..++...|..+... .. +.-++.+|..||.|++|.|+|.||+.++..
T Consensus 81 l~~~~~~f~~~~l~~~~~~l~~~~l~~~L~~lY~~l~~~~p~~v~~~~~~~~~a~~lf~~FD~~~~G~I~f~ef~~aLs~ 160 (261)
T 1eg3_A 81 LSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIIS 160 (261)
T ss_dssp HHHHHHHHHHTTCCCTTSEEEHHHHHHHHHHHHHHHHHHSTTTCCHHHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHHHHHHHhhCcCcCCchhhHHHHHHHHHHHccCCCCceEeHHHHHHHHHH
Confidence 3445566655432 366788999988776654221 11 223677999999999999999999999888
Q ss_pred cchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHh-------cCC------C-CHHHHHHHHHHhcCCCCcceeHHHHH
Q 010013 438 MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKK-------YNM------G-DAKTIKEIIAEVDIDNDGRINYEEFA 503 (520)
Q Consensus 438 ~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~-------~~~------~-~~~~~~~~~~~~d~~~dg~i~~~ef~ 503 (520)
......+++++.+|+.|| |+||+|+.+|+..+++. +|. . .++.++.+|..+| +||.|+.+||+
T Consensus 161 l~rG~leeKL~w~F~lyD-D~~G~I~~~El~~il~~i~~i~~~vge~~~~~~~~~e~~v~~~F~~~d--~dg~It~~EFl 237 (261)
T 1eg3_A 161 LCKAHLEDKYRYLFKQVA-SSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN--NKPEIEAALFL 237 (261)
T ss_dssp TSSSCHHHHHHHHHHHHS-CTTSCBCHHHHHHHHHHHHHHHHHTTCGGGGTCSCCHHHHHHHHHHTT--TCSCBCHHHHH
T ss_pred HcCCCHHHHHHHHHheee-CCCCCCcHHHHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHHHhCC--CCCcCCHHHHH
Confidence 777888899999999999 99999999999988854 232 2 4667899999996 89999999999
Q ss_pred HHHHcC
Q 010013 504 AMMRKG 509 (520)
Q Consensus 504 ~~l~~~ 509 (520)
+-++.+
T Consensus 238 ~~~~~d 243 (261)
T 1eg3_A 238 DWMRLE 243 (261)
T ss_dssp HHHHTC
T ss_pred HHHHhC
Confidence 999874
|
| >1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A | Back alignment and structure |
|---|
Probab=99.46 E-value=2.2e-13 Score=121.38 Aligned_cols=121 Identities=21% Similarity=0.258 Sum_probs=103.6
Q ss_pred CCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCC-CCCceehhhhHHHhhcc-chhhhHHHHHHHHhhhcCCCCCcee
Q 010013 386 NSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVD-GNGTIDYIEFITATMHM-NRVEREEHLYKAFEYFDKDNSGYIT 463 (520)
Q Consensus 386 ~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~-~~g~i~~~ef~~~~~~~-~~~~~~~~~~~~F~~~D~d~dG~I~ 463 (520)
..+.++.+++..+....+ .+.++++.+|..+|.+ ++|.|+++||..++... ........+..+|+.+|.|++|.|+
T Consensus 4 ~~~~l~~~~l~~l~~~~~--~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~ 81 (190)
T 1g8i_A 4 SNSKLKPEVVEELTRKTY--FTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIE 81 (190)
T ss_dssp CCCSCCHHHHHHHHHTSS--SCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEE
T ss_pred ccccCCHHHHHHHHHccC--CCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCCeEe
Confidence 345788999888877654 5789999999999998 89999999999987654 1123456799999999999999999
Q ss_pred HHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 464 MEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 464 ~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.+||..++..++.. ..+++..+|..+|.|++|.|+++||..++..
T Consensus 82 ~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~ 127 (190)
T 1g8i_A 82 FSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDA 127 (190)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHhhcCCCCCeECHHHHHHHHHH
Confidence 99999999877655 5678999999999999999999999999875
|
| >1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.46 E-value=1.3e-13 Score=126.46 Aligned_cols=121 Identities=18% Similarity=0.219 Sum_probs=100.1
Q ss_pred CCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCC-CCCceehhhhHHHhhccchh-hhHHHHHHHHhhhcCCCCCcee
Q 010013 386 NSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVD-GNGTIDYIEFITATMHMNRV-EREEHLYKAFEYFDKDNSGYIT 463 (520)
Q Consensus 386 ~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~-~~g~i~~~ef~~~~~~~~~~-~~~~~~~~~F~~~D~d~dG~I~ 463 (520)
..+.++.+++..++...+ ++.++++.+|..+|.+ ++|.|+++||..++...... .+...+..+|+.+|.|++|.|+
T Consensus 30 ~~~~l~~~~l~~l~~~~~--~s~~ei~~l~~~Fd~~d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~~G~I~ 107 (224)
T 1s1e_A 30 TMVCHRPEGLEQLEAQTN--FTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVK 107 (224)
T ss_dssp --------CHHHHHHHSS--CCHHHHHHHHHHHHHHCTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTCSSCBC
T ss_pred CccCCCHHHHHHHHHHcC--CCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCCCCcEe
Confidence 457899999999888766 7899999999999984 99999999999988765433 5678899999999999999999
Q ss_pred HHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 464 MEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 464 ~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.+||..++..++.. ..++++.+|+.+|.|+||.|+++||..++..
T Consensus 108 ~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~ 153 (224)
T 1s1e_A 108 FEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA 153 (224)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCCSEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCCHHHHHHHHHHHHcCCCCCeECHHHHHHHHHH
Confidence 99999999877654 6678999999999999999999999999865
|
| >1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.45 E-value=2.5e-13 Score=122.64 Aligned_cols=103 Identities=18% Similarity=0.185 Sum_probs=93.6
Q ss_pred CCHHHHHHHHHHhcCC-CCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHH
Q 010013 406 LSESEVRQLMEAADVD-GNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIK 483 (520)
Q Consensus 406 ~~~~~~~~~~~~~d~~-~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~ 483 (520)
.+.++++.+|..+|.+ ++|.|+++||..++...........+..+|+.+|.|++|.|+.+||..++..++.. ..+++.
T Consensus 19 ~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~ 98 (204)
T 1jba_A 19 ADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLK 98 (204)
T ss_dssp HHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHHH
T ss_pred CCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHhcCCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccCCHHHHHH
Confidence 5678899999999999 89999999999998876656677889999999999999999999999999987765 677899
Q ss_pred HHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 484 EIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 484 ~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.+|..+|.|++|.|+++||..++..
T Consensus 99 ~~F~~~D~d~~G~I~~~E~~~~l~~ 123 (204)
T 1jba_A 99 WTFKIYDKDRNGCIDRQELLDIVES 123 (204)
T ss_dssp HHHHHHCSSCSSCBCHHHHHHHHHH
T ss_pred HHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 9999999999999999999999875
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=4.9e-13 Score=125.83 Aligned_cols=141 Identities=18% Similarity=0.174 Sum_probs=111.7
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
..|.+...++.|+.+.||++... +..+++|+...... .....+.+|+.+++.+..+..++++++++...+..|+|
T Consensus 14 ~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~---~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv 88 (263)
T 3tm0_A 14 EKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYK---GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL 88 (263)
T ss_dssp TTSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGT---TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred ccceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccC---CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence 45888889999999999999753 57899999864321 11245889999999997677888999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH----------------------------------------
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS---------------------------------------- 186 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~---------------------------------------- 186 (520)
||+++|.+|.+.+. +......++.++..+|..||+
T Consensus 89 ~e~i~G~~l~~~~~-----~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (263)
T 3tm0_A 89 MSEADGVLCSEEYE-----DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTP 163 (263)
T ss_dssp EECCSSEEHHHHCC-----TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCS
T ss_pred EEecCCeehhhccC-----CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccccc
Confidence 99999999876521 222345788899999999998
Q ss_pred -------------------cCCeeecCCCCcEEeecCCCCCCeeEeecccccc
Q 010013 187 -------------------MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (520)
Q Consensus 187 -------------------~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 220 (520)
..++|+|++|.|||++ ++..+.|+||+.+..
T Consensus 164 ~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~---~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 164 FKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVK---DGKVSGFIDLGRSGR 213 (263)
T ss_dssp SSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEE---TTEEEEECCCTTCEE
T ss_pred CCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEE---CCcEEEEEEchhccc
Confidence 4589999999999995 234456999987654
|
| >1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A | Back alignment and structure |
|---|
Probab=99.43 E-value=3.4e-13 Score=112.51 Aligned_cols=98 Identities=24% Similarity=0.443 Sum_probs=86.7
Q ss_pred HHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHh---cCCC-CHHHHHHHH
Q 010013 411 VRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKK---YNMG-DAKTIKEII 486 (520)
Q Consensus 411 ~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~---~~~~-~~~~~~~~~ 486 (520)
++.+|..+|.|++|.|+++||..++.......+...+..+|+.+|.|++|.|+.+||..++.. .... +.+++..+|
T Consensus 2 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~f 81 (134)
T 1jfj_A 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLY 81 (134)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHHHHHHHH
Confidence 678999999999999999999998887766677888999999999999999999999999863 2222 456799999
Q ss_pred HHhcCCCCcceeHHHHHHHHHc
Q 010013 487 AEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 487 ~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..+|.|++|.|+++||..++..
T Consensus 82 ~~~D~d~~G~i~~~e~~~~l~~ 103 (134)
T 1jfj_A 82 KLMDVDGDGKLTKEEVTSFFKK 103 (134)
T ss_dssp HHHCCSSSSEEEHHHHHHHHTT
T ss_pred HHHCCCCCCccCHHHHHHHHHH
Confidence 9999999999999999999875
|
| >2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A | Back alignment and structure |
|---|
Probab=99.43 E-value=4.6e-13 Score=121.17 Aligned_cols=121 Identities=20% Similarity=0.260 Sum_probs=92.3
Q ss_pred CCCCCcccHHHHhhhhhhcCCCCCHH---HHHHHHHHhcCC--CCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCC
Q 010013 384 TDNSGTITFEELKAGLPKLGTRLSES---EVRQLMEAADVD--GNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDN 458 (520)
Q Consensus 384 ~~~~g~i~~~e~~~~l~~~~~~~~~~---~~~~~~~~~d~~--~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~ 458 (520)
+|++|.|+.+|+..+....+ ++.+ ++..+|..+|.| ++|.|+++||..++.. ........+..+|+.+|.|+
T Consensus 11 ~~~~g~l~~~el~~l~~~~~--~s~~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~f~~~D~d~ 87 (207)
T 2ehb_A 11 KNAMRPPGYEDPELLASVTP--FTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFR-NRNRRNLFADRIFDVFDVKR 87 (207)
T ss_dssp ----------CHHHHHHHSS--CCHHHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHS-CTTCCCHHHHHHHHHHCTTC
T ss_pred hccccccCHHHHHHHHHhCC--CCHHHHHHHHHHHHHhccccCCCCccCHHHHHHHHhc-cccccHHHHHHHHHHhcCCC
Confidence 47889999999999887655 3343 367888899999 9999999999998764 22233446778999999999
Q ss_pred CCceeHHHHHHHHHhcCCC--CHHHHHHHHHHhcCCCCcceeHHHHHHHHH
Q 010013 459 SGYITMEELEHALKKYNMG--DAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507 (520)
Q Consensus 459 dG~I~~~El~~~l~~~~~~--~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~ 507 (520)
+|.|+.+||..++...... ..+.+..+|..+|.|++|.|+++||..++.
T Consensus 88 ~g~i~~~Ef~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~ 138 (207)
T 2ehb_A 88 NGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVV 138 (207)
T ss_dssp SSEECHHHHHHHHGGGSTTSCHHHHHHHHHHHHCTTCCSSEEHHHHHHHHH
T ss_pred CCeEeHHHHHHHHHHHccCCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 9999999999999887643 466799999999999999999999999985
|
| >2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} | Back alignment and structure |
|---|
Probab=99.41 E-value=7.2e-13 Score=118.96 Aligned_cols=114 Identities=25% Similarity=0.393 Sum_probs=95.7
Q ss_pred HHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccc-------hh
Q 010013 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN-------RV 441 (520)
Q Consensus 369 ~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~-------~~ 441 (520)
......+..+|..+|.|++|.|+.+||..++..++...+.+++..+|..+|.|++|.|+++||..++.... ..
T Consensus 48 ~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~ 127 (198)
T 2r2i_A 48 PSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAM 127 (198)
T ss_dssp HHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSSCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHTTGGGGSSSCC
T ss_pred cchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCCchh
Confidence 34445688999999999999999999999999988888888999999999999999999999999876543 12
Q ss_pred hhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHH
Q 010013 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIA 487 (520)
Q Consensus 442 ~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~ 487 (520)
...+.+..+|+.+|.|++|.|+.+||..++.. ..++.+++.
T Consensus 128 ~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~-----~~~~~~~~~ 168 (198)
T 2r2i_A 128 TAEEFTNMVFDKIDINGDGELSLEEFMEGVQK-----DEVLLDILT 168 (198)
T ss_dssp CHHHHHHHHHHHHCTTCSSEECHHHHHHHHTT-----CHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHc-----CHHHHHHHh
Confidence 33456899999999999999999999998862 244555554
|
| >2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A | Back alignment and structure |
|---|
Probab=99.40 E-value=1.9e-14 Score=118.02 Aligned_cols=101 Identities=18% Similarity=0.288 Sum_probs=54.8
Q ss_pred hhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHH-----Hhhccc-hhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHH
Q 010013 399 LPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFIT-----ATMHMN-RVEREEHLYKAFEYFDKDNSGYITMEELEHALK 472 (520)
Q Consensus 399 l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~-----~~~~~~-~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~ 472 (520)
|+.+|.+++.++++.++..+ +|.|+|+||+. ++.... .....+.++.+|+.|| |+|+.+||+.++.
T Consensus 2 lr~lG~~~t~~ei~~~~~~~----~g~i~f~EF~~~~~~~~~~~~~~~~~~~~~l~~aF~~fD----G~I~~~El~~~l~ 73 (123)
T 2kld_A 2 STAIGINDTYSEVKSDLAQQ----KAEMELSDLIRKGYHKALVKLKLKKNTVDDISESLRQGG----GKLNFDELRQDLK 73 (123)
T ss_dssp -----------------------------------------------------CCSCSSTTTT----TCEEHHHHHHHTT
T ss_pred hhhcCCCCCHHHHHHHHHHc----CCCccHHHHHhHhHHHHHHHhhcChhHHHHHHHHHHHhC----CCCCHHHHHHHHH
Confidence 56788899999999999876 88999999998 554322 2233456888999998 9999999999999
Q ss_pred hcCCCCHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 473 KYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 473 ~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.+|. ++++++++|..+|.|+||.|+|+||+.+|..
T Consensus 74 ~lG~-t~~ei~~~~~~~D~d~dG~I~~~EF~~~~~~ 108 (123)
T 2kld_A 74 GKGH-TDAEIEAIFTKYDQDGDQELTEHEHQQMRDD 108 (123)
T ss_dssp TCCS-SHHHHHHHHHHHSSSSCCEECSHHHHHCSCT
T ss_pred HhCC-CHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence 9998 8899999999999999999999999999865
|
| >2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.40 E-value=3.5e-13 Score=105.81 Aligned_cols=65 Identities=31% Similarity=0.685 Sum_probs=60.9
Q ss_pred hhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHH
Q 010013 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMM 506 (520)
Q Consensus 442 ~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l 506 (520)
...++++.+|+.||+|++|+|+.+||+.+|+.+|.. ++++++++|+.+|.|+||.|+|+||+.+|
T Consensus 33 ~~~~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m 98 (100)
T 2lv7_A 33 DELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLL 98 (100)
T ss_dssp GGHHHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHh
Confidence 345679999999999999999999999999999988 88899999999999999999999999987
|
| >2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.9e-13 Score=107.40 Aligned_cols=72 Identities=32% Similarity=0.582 Sum_probs=67.7
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhh
Q 010013 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 436 (520)
..++++++++++++|+.+|.|++|+|+.+||..++..+|..++.++++.+|..+|.|++|.|+|+||+.++.
T Consensus 28 ~~l~~~~~~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m~ 99 (100)
T 2lv7_A 28 VDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLLG 99 (100)
T ss_dssp CCCCGGGHHHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHTC
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHhC
Confidence 356788899999999999999999999999999999999999999999999999999999999999998763
|
| >2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
Probab=99.39 E-value=2.2e-12 Score=108.89 Aligned_cols=101 Identities=15% Similarity=0.186 Sum_probs=90.0
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHh-cCCC-CHHHHHHHH
Q 010013 409 SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKK-YNMG-DAKTIKEII 486 (520)
Q Consensus 409 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~-~~~~-~~~~~~~~~ 486 (520)
.+++.+|..+|.|++|.|+++||..++.......+...+..+|+.+|.|++|.|+.+||..++.. .... ..+.+..+|
T Consensus 6 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F 85 (142)
T 2bl0_C 6 SEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDILRQAF 85 (142)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChHHHHHHHH
Confidence 56889999999999999999999998877666677788999999999999999999999999986 3333 678899999
Q ss_pred HHhcCCCCcceeHHHHHHHHHcC
Q 010013 487 AEVDIDNDGRINYEEFAAMMRKG 509 (520)
Q Consensus 487 ~~~d~~~dg~i~~~ef~~~l~~~ 509 (520)
..+|.|++|.|+.+||..++..-
T Consensus 86 ~~~D~d~~G~i~~~el~~~l~~~ 108 (142)
T 2bl0_C 86 RTFDPEGTGYIPKAALQDALLNL 108 (142)
T ss_dssp HHTCCSSCSCEEHHHHHHHHHHS
T ss_pred HHHCCCCCCcCcHHHHHHHHHHc
Confidence 99999999999999999999863
|
| >2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A | Back alignment and structure |
|---|
Probab=99.38 E-value=1e-12 Score=111.30 Aligned_cols=100 Identities=21% Similarity=0.367 Sum_probs=87.7
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCC-C-CHHHHHHHH
Q 010013 409 SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNM-G-DAKTIKEII 486 (520)
Q Consensus 409 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~-~-~~~~~~~~~ 486 (520)
.+++.+|..+|.|++|.|+.+||..++.......+...+..+|+.+|.|++|.|+.+||..++..... . ..+++..+|
T Consensus 6 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F 85 (143)
T 2obh_A 6 QEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAF 85 (143)
T ss_dssp HHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHHHHhccccHHHHHHHHH
Confidence 56889999999999999999999998887766677888999999999999999999999988764321 1 346789999
Q ss_pred HHhcCCCCcceeHHHHHHHHHc
Q 010013 487 AEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 487 ~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
+.+|.|++|.|+.+||..++..
T Consensus 86 ~~~D~d~~G~I~~~el~~~l~~ 107 (143)
T 2obh_A 86 KLFDDDETGKISFKNLKRVAKE 107 (143)
T ss_dssp HHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHhCCCCCCcCcHHHHHHHHHH
Confidence 9999999999999999999976
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.38 E-value=1.3e-12 Score=114.71 Aligned_cols=99 Identities=19% Similarity=0.303 Sum_probs=87.2
Q ss_pred HHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCH--------HHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHH
Q 010013 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSE--------SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEH 446 (520)
Q Consensus 375 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~--------~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~ 446 (520)
+..+|+.+|.|++|.|+.+||..++......... ..+..+|..+|.|++|.|+++||..++.... .+.+.
T Consensus 60 ~~~lf~~~D~d~dg~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g--~~~~~ 137 (176)
T 1nya_A 60 FDYLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG--MSKAE 137 (176)
T ss_dssp HHHHHHHHTSCTTCCBCHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT--CCHHH
T ss_pred HHHHHHHhCCCCCCeEcHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhC--CCHHH
Confidence 3489999999999999999999998876555443 5689999999999999999999999887654 67788
Q ss_pred HHHHHhhhcCCCCCceeHHHHHHHHHhcC
Q 010013 447 LYKAFEYFDKDNSGYITMEELEHALKKYN 475 (520)
Q Consensus 447 ~~~~F~~~D~d~dG~I~~~El~~~l~~~~ 475 (520)
+..+|+.+|.|++|.|+.+||..++..+.
T Consensus 138 ~~~~~~~~D~d~dg~i~~~ef~~~~~~~~ 166 (176)
T 1nya_A 138 AAEAFNQVDTNGNGELSLDELLTAVRDFH 166 (176)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHSCCS
T ss_pred HHHHHHHhCCCCCCCCcHHHHHHHHHHHh
Confidence 99999999999999999999999997664
|
| >3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A | Back alignment and structure |
|---|
Probab=99.38 E-value=9.4e-13 Score=121.10 Aligned_cols=113 Identities=20% Similarity=0.351 Sum_probs=95.7
Q ss_pred hHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc------------chh
Q 010013 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM------------NRV 441 (520)
Q Consensus 374 ~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~------------~~~ 441 (520)
.+.++|+.+|.|++|.|+.+||..++..+......+.+..+|..+|.|++|.|+++||..++... ...
T Consensus 103 ~~~~lf~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~ 182 (229)
T 3dd4_A 103 YAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKED 182 (229)
T ss_dssp HHHHHHHTTCSSCCSSCCHHHHHHHHHHHHHSCHHHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC----------
T ss_pred HHHHHHHHcCCCCCCeEeHHHHHHHHHHHcCCChHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcchh
Confidence 46789999999999999999999999887766677889999999999999999999999987643 222
Q ss_pred hhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcC
Q 010013 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDI 491 (520)
Q Consensus 442 ~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~ 491 (520)
...+.+..+|+.+|.|+||.|+.+||..++.. ...+.++|..+|.
T Consensus 183 ~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~-----~~~~~~~~~~~D~ 227 (229)
T 3dd4_A 183 APRQHVETFFQKMDKNKDGVVTIDEFIESCQK-----DENIMRSMQLFEN 227 (229)
T ss_dssp -CCTHHHHHHHHHCSSCSSBCCHHHHHHHHHT-----CHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHh-----CHHHHHHHHhccc
Confidence 34567999999999999999999999999984 2567888888874
|
| >1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.37 E-value=2.3e-13 Score=104.50 Aligned_cols=84 Identities=33% Similarity=0.455 Sum_probs=69.9
Q ss_pred CCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeH
Q 010013 421 DGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINY 499 (520)
Q Consensus 421 ~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~ 499 (520)
|++|.|+|+|++. ...........++.+|+.+|.|++|+|+.+||+.++..++.. +.+++..+|..+|.|++|.|+|
T Consensus 1 ~~~G~i~~~e~~~--~~~l~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~ 78 (87)
T 1s6j_A 1 HSSGHIDDDDKHM--AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDY 78 (87)
T ss_dssp CCSSSSSSHHHHS--SSSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECH
T ss_pred CCCCccCccHHHH--HHHCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcH
Confidence 5789999999432 211112223468899999999999999999999999999987 8899999999999999999999
Q ss_pred HHHHHHH
Q 010013 500 EEFAAMM 506 (520)
Q Consensus 500 ~ef~~~l 506 (520)
+||+.++
T Consensus 79 ~eF~~~~ 85 (87)
T 1s6j_A 79 GEFIAAT 85 (87)
T ss_dssp HHHTTCC
T ss_pred HHHHHHH
Confidence 9998754
|
| >1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A | Back alignment and structure |
|---|
Probab=99.37 E-value=8.1e-13 Score=112.33 Aligned_cols=89 Identities=18% Similarity=0.346 Sum_probs=77.7
Q ss_pred HHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHH
Q 010013 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLY 448 (520)
Q Consensus 369 ~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~ 448 (520)
.+++.++..+|+.+|.|++|+|+.+||..++..+|..++.++++.+|..+|.|++|.|+|+||+.++... ...+.
T Consensus 44 ~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~-----~~~~~ 118 (147)
T 1wy9_A 44 PSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLGK-----RSAIL 118 (147)
T ss_dssp HHHHHHHHHHHTTSCCCTTSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHCSS-----GGGGG
T ss_pred HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh-----HHHHH
Confidence 5788899999999999999999999999999999999999999999999999999999999999987643 34588
Q ss_pred HHHhhhcCCCCCce
Q 010013 449 KAFEYFDKDNSGYI 462 (520)
Q Consensus 449 ~~F~~~D~d~dG~I 462 (520)
.+|+.||.+++|..
T Consensus 119 ~aF~~~D~d~~g~~ 132 (147)
T 1wy9_A 119 RMILMYEEKNKEHK 132 (147)
T ss_dssp GGGGGCCCC-----
T ss_pred HHHHHHccCCCCCC
Confidence 89999999999984
|
| >3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L | Back alignment and structure |
|---|
Probab=99.36 E-value=1.2e-12 Score=139.74 Aligned_cols=124 Identities=19% Similarity=0.247 Sum_probs=110.5
Q ss_pred hhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHh
Q 010013 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452 (520)
Q Consensus 373 ~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~ 452 (520)
.++..+|..+|.|++|.|+.+||..++..+ ++++.+|..+|.|++|.|+.+||..++.......+.+.+..+|+
T Consensus 575 ~~~~~l~~~~D~d~~G~I~f~EF~~l~~~~------~~l~~~F~~~D~d~dG~Is~~El~~~L~~~G~~ls~~~~~~l~~ 648 (714)
T 3bow_A 575 ETCKIMVDMLDEDGSGKLGLKEFYILWTKI------QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVA 648 (714)
T ss_dssp HHHHHHHHHHCCSSCSSBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSSEEHHHHHHHHHHTTEECCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHH------HHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence 346788899999999999999999988765 68999999999999999999999998877665667788999999
Q ss_pred hhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 453 YFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 453 ~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.+| |+||.|+.+||..++... +.+.++|+.+|.|++|.|+++|+..++..
T Consensus 649 ~~D-d~dG~Isf~EF~~~l~~~-----~~l~~~F~~~D~d~dG~Is~~el~~l~~~ 698 (714)
T 3bow_A 649 RFA-DDELIIDFDNFVRCLVRL-----EILFKIFKQLDPENTGTIQLDLISWLSFS 698 (714)
T ss_dssp HHS-CTTCEECHHHHHHHHHHH-----HHHHHHHSSSCSSCCSEEEEEHHHHHHHH
T ss_pred HhC-CCCCeEcHHHHHHHHHHH-----HHHHHHHHHhCCCCCCcEEHHHHHHHHHH
Confidence 999 999999999999999754 57889999999999999999998776654
|
| >2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A | Back alignment and structure |
|---|
Probab=99.36 E-value=3.7e-12 Score=108.47 Aligned_cols=100 Identities=21% Similarity=0.260 Sum_probs=89.4
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC--CHHHHHHHH
Q 010013 409 SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG--DAKTIKEII 486 (520)
Q Consensus 409 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~--~~~~~~~~~ 486 (520)
++++.+|..+|.|++|.|+++||..++.......+...+..+|..+|.+++|.|+..||...+...... .++++..+|
T Consensus 10 ~el~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~l~~aF 89 (148)
T 2lmt_A 10 AEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTEEEMREAF 89 (148)
T ss_dssp HHHHHHHHHHHCSSCCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTTTHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcccCcHHHHHHHH
Confidence 457788999999999999999999988877777788899999999999999999999999988764333 678899999
Q ss_pred HHhcCCCCcceeHHHHHHHHHc
Q 010013 487 AEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 487 ~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
+.+|.|++|.|+.+||..++..
T Consensus 90 ~~~D~d~~G~I~~~El~~~l~~ 111 (148)
T 2lmt_A 90 KIFDRDGDGFISPAELRFVMIN 111 (148)
T ss_dssp HHHHSSCSSEECHHHHHHHHHH
T ss_pred HHHCCCCcCcCcHHHHHHHHHH
Confidence 9999999999999999999876
|
| >3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.36 E-value=1.2e-12 Score=118.05 Aligned_cols=115 Identities=16% Similarity=0.271 Sum_probs=95.6
Q ss_pred hHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc-------chhhhHHH
Q 010013 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM-------NRVEREEH 446 (520)
Q Consensus 374 ~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~-------~~~~~~~~ 446 (520)
++..+|+.+|.|++|.|+.+||..++.........+.+..+|..+|.|++|.|+++||..++... ......+.
T Consensus 74 ~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~ 153 (204)
T 3e3r_A 74 EAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEV 153 (204)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHTSCCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHCCCTTCHHHHTTSSCHHHH
T ss_pred HHHHHHHHhccCCCCcCcHHHHHHHHHhhcCchHHHHHHHHHHHhCcCCCCeEeHHHHHHHHccccCCccccCCCChHHH
Confidence 46788999999999999999999998876655556789999999999999999999999988632 23345677
Q ss_pred HHHHHhhhcC-CCCCceeHHHHHHHHHhcCC--CCHHHHHHHHHH
Q 010013 447 LYKAFEYFDK-DNSGYITMEELEHALKKYNM--GDAKTIKEIIAE 488 (520)
Q Consensus 447 ~~~~F~~~D~-d~dG~I~~~El~~~l~~~~~--~~~~~~~~~~~~ 488 (520)
+..+|+.+|. |+||.|+.+||..++..++. .++++.+.++..
T Consensus 154 ~~~~~~~~D~~d~dg~Is~~EF~~~~~~~~~~~~~d~~f~~~~~~ 198 (204)
T 3e3r_A 154 LRRFLDNFDSSEKDGQVTLAEFQDYYSGVSASMNTDEEFVAMMTS 198 (204)
T ss_dssp HHHHHHHHSCSSCCSCEEHHHHHHHHHHHHHHCSSHHHHHHHHHH
T ss_pred HHHHHHHhhccCCCCcCcHHHHHHHHHHcCccCCChHHHHHHHHH
Confidence 9999999998 99999999999999988763 256666666543
|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A | Back alignment and structure |
|---|
Probab=99.36 E-value=2.4e-12 Score=103.42 Aligned_cols=100 Identities=17% Similarity=0.248 Sum_probs=84.9
Q ss_pred hhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc---chhh
Q 010013 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM---NRVE 442 (520)
Q Consensus 366 ~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~---~~~~ 442 (520)
.++.++ +.++|+.+| ++|.|+.+||..++.. .....+++..+|..+|.|++|.|+.+||..++... ....
T Consensus 6 ~~~~~e---i~~~~~~~D--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~ 78 (109)
T 3fs7_A 6 ILSAKD---IESALSSCQ--AADSFNYKSFFSTVGL--SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVL 78 (109)
T ss_dssp TSCHHH---HHHHHHHTC--STTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCCC
T ss_pred cCCHHH---HHHHHHhcC--CCCcCcHHHHHHHHhc--CCCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccccC
Confidence 344444 567777777 8999999999998865 23567889999999999999999999999988776 5566
Q ss_pred hHHHHHHHHhhhcCCCCCceeHHHHHHHHH
Q 010013 443 REEHLYKAFEYFDKDNSGYITMEELEHALK 472 (520)
Q Consensus 443 ~~~~~~~~F~~~D~d~dG~I~~~El~~~l~ 472 (520)
+.+.+..+|+.+|.|++|.|+.+||..+++
T Consensus 79 ~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~ 108 (109)
T 3fs7_A 79 TSAETKAFLAAGDTDGDGKIGVEEFQSLVK 108 (109)
T ss_dssp CHHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred CHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 788899999999999999999999998874
|
| >3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.35 E-value=5.3e-12 Score=134.71 Aligned_cols=129 Identities=11% Similarity=0.191 Sum_probs=112.5
Q ss_pred hhHHHHhcc--cCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCC-------CCCceehhhhHHHhhccchhhh
Q 010013 373 MGLKEMFKS--MDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVD-------GNGTIDYIEFITATMHMNRVER 443 (520)
Q Consensus 373 ~~l~~~F~~--~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~-------~~g~i~~~ef~~~~~~~~~~~~ 443 (520)
..+.++|.. +|.|++|.|+.+|+..++.. ..++++.+|+.+|.+ ++|.|+|+||..++..+..
T Consensus 150 ~~L~kaf~~~~~D~n~dGkIs~kel~~~l~~-----~~~~v~~l~~~~d~~~~~~d~~~~g~i~feEF~~f~~~l~~--- 221 (885)
T 3ohm_B 150 TFLRKAYTKLKLQVNQDGRIPVKNILKMFSA-----DKKRVETALESCGLKFNRSESIRPDEFSLEIFERFLNKLCL--- 221 (885)
T ss_dssp HHHHHHHHHHHHSCCTTSCEEHHHHHHTTGG-----GHHHHHHHHHTTTCCCSTTCEECGGGCCHHHHHHHHHHHSC---
T ss_pred HHHHHHHHHhcCccCCCCccCHHHHHHHHhc-----CHHHHHHHHHHhCCCccccccCCCCcCCHHHHHHHHHhcCC---
Confidence 457788887 89999999999999998875 467899999999987 7899999999998875432
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHhcC-C----------CCHHHHHHHHHHhcCC----CCcceeHHHHHHHHHc
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYN-M----------GDAKTIKEIIAEVDID----NDGRINYEEFAAMMRK 508 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~-~----------~~~~~~~~~~~~~d~~----~dg~i~~~ef~~~l~~ 508 (520)
..+++.+|+.||.+++|+||.+||..+|...+ . .+.+++.++|..++.+ ++|.|++++|..+|..
T Consensus 222 R~EI~eiF~~ydsd~~g~mT~~EL~~FL~~~Q~e~~~~e~~~~~~t~e~~~~iI~k~e~~~~~~~~g~LsldgF~~yL~S 301 (885)
T 3ohm_B 222 RPDIDKILLEIGAKGKPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEKYEPNQQFLERDQMSMEGFSRYLGG 301 (885)
T ss_dssp CHHHHHHHHHTTCCSTTCEEHHHHHHHHHHHSSCTTSCTTTSCCCCHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHTS
T ss_pred HHHHHHHHHHHhcCCCCccCHHHHHHHHHHhcCcccccccccccCCHHHHHHHHHHhcCChhhhccCccchhhhhhhccC
Confidence 35799999999999999999999999999874 3 2568899999999998 7999999999999986
Q ss_pred C
Q 010013 509 G 509 (520)
Q Consensus 509 ~ 509 (520)
.
T Consensus 302 ~ 302 (885)
T 3ohm_B 302 E 302 (885)
T ss_dssp T
T ss_pred c
Confidence 3
|
| >3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.35 E-value=1.9e-12 Score=115.33 Aligned_cols=103 Identities=20% Similarity=0.343 Sum_probs=89.5
Q ss_pred CCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc-----------chhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHh
Q 010013 405 RLSESEVRQLMEAADVDGNGTIDYIEFITATMHM-----------NRVEREEHLYKAFEYFDKDNSGYITMEELEHALKK 473 (520)
Q Consensus 405 ~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~-----------~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~ 473 (520)
.....++..+|..+|.|++|.|+++||..++... ....+...+..+|+.+|.|++|.|+.+||..++..
T Consensus 36 ~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~ef~~~~~~ 115 (191)
T 3khe_A 36 LEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMD 115 (191)
T ss_dssp TTTTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHTCTTCSSSEEHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence 3445779999999999999999999999987755 44566788999999999999999999999998854
Q ss_pred cCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHH
Q 010013 474 YNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507 (520)
Q Consensus 474 ~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~ 507 (520)
.... ..+.+..+|..+|.|++|.|+++||..++.
T Consensus 116 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~ 150 (191)
T 3khe_A 116 KQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFG 150 (191)
T ss_dssp HHHHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTT
T ss_pred hcccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHc
Confidence 4332 667899999999999999999999999987
|
| >4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.35 E-value=1.7e-12 Score=104.70 Aligned_cols=106 Identities=20% Similarity=0.331 Sum_probs=75.8
Q ss_pred HHHHhhHHHHhcccCCCCCCcccHHHHhhhhhh-----cCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhh
Q 010013 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPK-----LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVER 443 (520)
Q Consensus 369 ~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~ 443 (520)
+..+..|..+|+.||.| +|+|+.+||+.+|.. ++...+.++++++|+.+|.|+||.|+|+||+.++..+..
T Consensus 11 E~~ie~l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~l~~--- 86 (121)
T 4drw_A 11 EHAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGLTI--- 86 (121)
T ss_dssp HHHHHHHHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTTSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHH---
Confidence 45678899999999988 899999999999987 788889999999999999999999999999998865421
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCC
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDND 494 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~d 494 (520)
.....|....+..+++.. .+..+.++|+++|.|||
T Consensus 87 --~~he~f~~~~k~~~~~~~--------------~d~~~~e~~~~~d~~gd 121 (121)
T 4drw_A 87 --ACNDYFVVHMKQENLYFQ--------------GDSTVHEILSKLSLEGD 121 (121)
T ss_dssp --HHHHHHTTSCC-----------------------CCHHHHHHHCCC---
T ss_pred --HHHHHHHHHHHHhccCCC--------------CchHHHHHHHHhcccCC
Confidence 112334444332222111 22347788888888775
|
| >2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=99.34 E-value=1.4e-12 Score=122.17 Aligned_cols=121 Identities=21% Similarity=0.230 Sum_probs=99.9
Q ss_pred CCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCC-CCCceehhhhHHHhhccc-hhhhHHHHHHHHhhhcCCCCCcee
Q 010013 386 NSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVD-GNGTIDYIEFITATMHMN-RVEREEHLYKAFEYFDKDNSGYIT 463 (520)
Q Consensus 386 ~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~-~~g~i~~~ef~~~~~~~~-~~~~~~~~~~~F~~~D~d~dG~I~ 463 (520)
..+.++.+++..+....+ ++.++++.+|..+|.+ ++|.|+++||..++.... .......+..+|+.+|.|++|.|+
T Consensus 70 ~~~~l~~e~l~~l~~~~~--~s~~ei~~l~~~fd~~~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~ 147 (256)
T 2jul_A 70 STVRHQPEGLDQLQAQTK--FTKKELQSLYRGFKNECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIH 147 (256)
T ss_dssp ------CTHHHHHHHHTT--SCHHHHHHHHHHHHHHCTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSCCSEEC
T ss_pred ccccCCHHHHHHHHHHhC--CCHHHHHHHHHHHHhhCCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccCCCCcCc
Confidence 345577788888776654 6889999999999875 799999999999887553 345667899999999999999999
Q ss_pred HHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 464 MEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 464 ~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.+||..++..++.. ..+++..+|..+|.|+||.|+++||..++..
T Consensus 148 ~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~ 193 (256)
T 2jul_A 148 FEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKS 193 (256)
T ss_dssp SHHHHHHHHHHHSCCHHHHHHHHHHHTCCSSSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 99999999887655 6778999999999999999999999999874
|
| >2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A | Back alignment and structure |
|---|
Probab=99.34 E-value=9.6e-13 Score=112.32 Aligned_cols=89 Identities=21% Similarity=0.364 Sum_probs=73.1
Q ss_pred HHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHH
Q 010013 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLY 448 (520)
Q Consensus 369 ~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~ 448 (520)
.+++.++..+|+.+|.|++|+|+.+||..++..+|..++.++++.+|..+|.|++|.|+|+||+.++... ...+.
T Consensus 46 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~~-----~~~i~ 120 (150)
T 2jjz_A 46 PEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGK-----RSAVL 120 (150)
T ss_dssp HHHHHHHHHHHTTSCCCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSCSSBCHHHHHHHHHSS-----SCCHH
T ss_pred HHHHHHHHHHHHHhCCCCcCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHh-----HHHHH
Confidence 4667889999999999999999999999999999999999999999999999999999999999987643 34589
Q ss_pred HHHhhhcCCCCCce
Q 010013 449 KAFEYFDKDNSGYI 462 (520)
Q Consensus 449 ~~F~~~D~d~dG~I 462 (520)
.+|+.||.|++|+-
T Consensus 121 ~aF~~~D~d~~G~~ 134 (150)
T 2jjz_A 121 KLVMMFEGKANESS 134 (150)
T ss_dssp HHHHC---------
T ss_pred HHHHHHcCCCCCCC
Confidence 99999999999984
|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=99.34 E-value=4.3e-12 Score=101.88 Aligned_cols=101 Identities=16% Similarity=0.245 Sum_probs=85.6
Q ss_pred hhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc---chhh
Q 010013 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM---NRVE 442 (520)
Q Consensus 366 ~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~---~~~~ 442 (520)
.++.++ +.++|+.+|. +|.|+.+||..++... ....+++..+|..+|.|++|.|+.+||..++... ....
T Consensus 5 ~~s~~e---i~~~~~~~d~--~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~~~ 77 (109)
T 5pal_A 5 VLKADD---INKAISAFKD--PGTFDYKRFFHLVGLK--GKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDL 77 (109)
T ss_dssp TSCHHH---HHHHHHHTCS--TTCCCHHHHHHHHTCT--TCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCC
T ss_pred cCCHHH---HHHHHHHhCC--CCcCcHHHHHHHHhhc--cCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCCCC
Confidence 345544 5677777776 8999999999988642 3567889999999999999999999999988765 5566
Q ss_pred hHHHHHHHHhhhcCCCCCceeHHHHHHHHHh
Q 010013 443 REEHLYKAFEYFDKDNSGYITMEELEHALKK 473 (520)
Q Consensus 443 ~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~ 473 (520)
+.+.+..+|+.+|.|++|.|+.+||..++..
T Consensus 78 ~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 5pal_A 78 NDTETKALLAAGDSDHDGKIGADEFAKMVAQ 108 (109)
T ss_dssp CHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 7888999999999999999999999998864
|
| >3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A | Back alignment and structure |
|---|
Probab=99.34 E-value=2.1e-12 Score=128.06 Aligned_cols=129 Identities=23% Similarity=0.285 Sum_probs=104.1
Q ss_pred cccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCC
Q 010013 380 KSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459 (520)
Q Consensus 380 ~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~d 459 (520)
+.+|.+.+|.|...++.............++++.+|..+|.|++|.|+.+||..++.......+.+.++.+|+.+|.|++
T Consensus 283 k~iD~de~g~i~~~e~~~~~~~~ls~eei~el~~~F~~fD~D~dG~Is~~EL~~~L~~lg~~~s~eel~~Lf~~~D~Dgd 362 (450)
T 3sg6_A 283 KGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 362 (450)
T ss_dssp EEESCCTTSTTTTTCBCCC---CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTSS
T ss_pred ccCCccccccchhhhhhhhhcccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCC
Confidence 45788899999887765432221111123568999999999999999999999998876666778889999999999999
Q ss_pred CceeHHHHHHHHHhcCCC--CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 460 GYITMEELEHALKKYNMG--DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 460 G~I~~~El~~~l~~~~~~--~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
|.|+.+||..++...... ..+.+..+|..+|.|++|.|+.+||..++..
T Consensus 363 G~IsfeEFl~ll~~~~~~~~~~e~l~~aFk~fD~D~dG~Is~eELr~~L~~ 413 (450)
T 3sg6_A 363 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 413 (450)
T ss_dssp SSEEHHHHHHHHHC------CHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred CcccHHHHHHHHHhhccccchhhHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 999999999999765332 6678999999999999999999999999976
|
| >4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A | Back alignment and structure |
|---|
Probab=99.33 E-value=3.9e-12 Score=107.98 Aligned_cols=100 Identities=18% Similarity=0.238 Sum_probs=88.4
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC--CHHHHHHHH
Q 010013 409 SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG--DAKTIKEII 486 (520)
Q Consensus 409 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~--~~~~~~~~~ 486 (520)
.++..+|..+|.|++|.|+.+||..++.......+...+..+|+.+|.|++|.|+.+||..++...... ..+.+..+|
T Consensus 11 ~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F 90 (147)
T 4ds7_A 11 AEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAF 90 (147)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccCCCcHHHHHHHH
Confidence 457888999999999999999999988776666778889999999999999999999999998754322 456789999
Q ss_pred HHhcCCCCcceeHHHHHHHHHc
Q 010013 487 AEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 487 ~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..+|.|++|.|+.+||..++..
T Consensus 91 ~~~D~d~~G~i~~~e~~~~l~~ 112 (147)
T 4ds7_A 91 KVFDKNGDGLISAAELKHVLTS 112 (147)
T ss_dssp HHHCTTCSSEECHHHHHHHHHH
T ss_pred HHhCCCCCCeECHHHHHHHHHH
Confidence 9999999999999999999986
|
| >2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A | Back alignment and structure |
|---|
Probab=99.33 E-value=1.5e-12 Score=111.06 Aligned_cols=93 Identities=22% Similarity=0.305 Sum_probs=74.4
Q ss_pred CCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHH
Q 010013 406 LSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKE 484 (520)
Q Consensus 406 ~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~ 484 (520)
++.++++.++..+|.+++ |.+|..+ ......++.+|+.||.|++|+|+.+||+.++..+|.. +++++++
T Consensus 21 ~~~~~~~~i~~~~d~~~~----~~~~~~l------~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~ 90 (150)
T 2jjz_A 21 RQERRLAEINREFLCDQK----YSDEENL------PEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKK 90 (150)
T ss_dssp HHHHHHHHHHHHHHTCGG----GSSCTTH------HHHHHHHHHHHTTSCCCTTSSBCHHHHHHHHHHTTCCCCHHHHHH
T ss_pred CcHHHHHHHHHHhccCCC----chhhHhH------HHHHHHHHHHHHHhCCCCcCcCCHHHHHHHHHHcCCCCCHHHHHH
Confidence 456788888888887664 4444332 2445678889999999999999999999999888877 7888999
Q ss_pred HHHHhcCCCCcceeHHHHHHHHHc
Q 010013 485 IIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 485 ~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
+|..+|.|+||.|+|+||+.++..
T Consensus 91 l~~~~D~d~dg~I~~~eF~~~~~~ 114 (150)
T 2jjz_A 91 MISEVTGGVSDTISYRDFVNMMLG 114 (150)
T ss_dssp HHHHHHTTSCSSBCHHHHHHHHHS
T ss_pred HHHHHCCCCCCcEeHHHHHHHHHH
Confidence 999999999999999999988865
|
| >1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... | Back alignment and structure |
|---|
Probab=99.33 E-value=3e-12 Score=109.02 Aligned_cols=100 Identities=23% Similarity=0.306 Sum_probs=86.8
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCC-C-CHHHHHHHH
Q 010013 409 SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNM-G-DAKTIKEII 486 (520)
Q Consensus 409 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~-~-~~~~~~~~~ 486 (520)
.+++.+|..+|.|++|.|+++||..++.......+...+..+|+.+|.|++|.|+.+||..++..... . ..+++..+|
T Consensus 10 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F 89 (148)
T 1exr_A 10 AEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAF 89 (148)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhcccCCCcHHHHHHHH
Confidence 35788999999999999999999998877666667788999999999999999999999988864321 1 456788999
Q ss_pred HHhcCCCCcceeHHHHHHHHHc
Q 010013 487 AEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 487 ~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..+|.|++|.|+.+||..++..
T Consensus 90 ~~~D~d~~G~I~~~el~~~l~~ 111 (148)
T 1exr_A 90 KVFDRDGNGLISAAELRHVMTN 111 (148)
T ss_dssp HHHSTTCSSCBCHHHHHHHHHH
T ss_pred HHhCCCCCCcCCHHHHHHHHHH
Confidence 9999999999999999999976
|
| >3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor} | Back alignment and structure |
|---|
Probab=99.33 E-value=4.4e-12 Score=122.66 Aligned_cols=122 Identities=24% Similarity=0.327 Sum_probs=97.1
Q ss_pred CCCcccHHHHhhhhhhcCCCCCHH---HHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCce
Q 010013 386 NSGTITFEELKAGLPKLGTRLSES---EVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYI 462 (520)
Q Consensus 386 ~~g~i~~~e~~~~l~~~~~~~~~~---~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I 462 (520)
.+|-+..+.-..+.... ..++.+ +++++|..+|.|++|.|+.+||..++..+....+.+++..+|+.+|.|++|.|
T Consensus 277 ~~GPVMKKKTl~wePs~-E~Lt~EEI~ELREaF~~fDkDgdG~IS~eELk~aLrsLG~~~TeeEI~~Lf~~~D~DgDG~I 355 (440)
T 3u0k_A 277 SNGAVMQKKTKGWEPTR-DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 355 (440)
T ss_dssp TTSTTTTTCEEEECCBC-BCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCSSSE
T ss_pred CCCCccchhhhhhHhhH-hhhhHHHHHHHHHHHHHHcCCCCCEECHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcC
Confidence 45555444444433332 223444 47889999999999999999999998877777788899999999999999999
Q ss_pred eHHHHHHHHHhcCCC--CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 463 TMEELEHALKKYNMG--DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 463 ~~~El~~~l~~~~~~--~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
+++||..++...... .++++.++|+.+|.|++|.|+.+||..++..
T Consensus 356 dFeEFl~lms~~lk~~d~eeeLreAFk~fDkDgdG~IS~eELr~vL~~ 403 (440)
T 3u0k_A 356 DFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 403 (440)
T ss_dssp EHHHHHHHHHTC------CHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred cHHHHHHHHHHHhcCCChHHHHHHHHHHHCCCCcCcCCHHHHHHHHHH
Confidence 999999988754332 5578999999999999999999999999876
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A | Back alignment and structure |
|---|
Probab=99.32 E-value=3.3e-12 Score=110.82 Aligned_cols=97 Identities=23% Similarity=0.272 Sum_probs=83.6
Q ss_pred HHHhcccCCCCCCcccHHHHhhhhhhcCCCCC-------HHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHH
Q 010013 376 KEMFKSMDTDNSGTITFEELKAGLPKLGTRLS-------ESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLY 448 (520)
Q Consensus 376 ~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~-------~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~ 448 (520)
..+|+.+|.|++|.|+.+||..++........ .+.+..+|..+|.|++|.|+++||..++.... .+.+.+.
T Consensus 58 ~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~--~~~~~~~ 135 (166)
T 3akb_A 58 QGLAGIADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG--VPEDLAR 135 (166)
T ss_dssp HHHHHHHCTTSSSCEEHHHHHHTHHHHHHHSHHHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHTT--CCHHHHH
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC--CCHHHHH
Confidence 48899999999999999999998877543221 23489999999999999999999999887654 6678899
Q ss_pred HHHhhhcCCCCCceeHHHHHHHHHhc
Q 010013 449 KAFEYFDKDNSGYITMEELEHALKKY 474 (520)
Q Consensus 449 ~~F~~~D~d~dG~I~~~El~~~l~~~ 474 (520)
.+|+.+|.|+||.|+.+||..++..+
T Consensus 136 ~~~~~~D~d~dg~i~~~ef~~~~~~~ 161 (166)
T 3akb_A 136 QAAAALDTDGDGKVGETEIVPAFARY 161 (166)
T ss_dssp HHHHHHCTTCSSBCCHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 99999999999999999999998754
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.32 E-value=9.9e-13 Score=110.08 Aligned_cols=100 Identities=11% Similarity=0.019 Sum_probs=66.4
Q ss_pred HHHHhcccCCCCCCcccHHHHhhhhhhc-CCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccc-hhhhHHHHHHHHh
Q 010013 375 LKEMFKSMDTDNSGTITFEELKAGLPKL-GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN-RVEREEHLYKAFE 452 (520)
Q Consensus 375 l~~~F~~~D~~~~g~i~~~e~~~~l~~~-~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~-~~~~~~~~~~~F~ 452 (520)
..++|+.+|.|++|.|+.+||..++... ......+++..+|..+|.|++|.|+.+||..++.... ...+.+++..+|+
T Consensus 5 ~~~l~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~~ 84 (135)
T 3h4s_E 5 EKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVR 84 (135)
T ss_dssp --------------CCCC-----------CHHHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCcEeHHHHHHHHHHHccccchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHH
Confidence 3678999999999999999999988653 2222456799999999999999999999999988776 3677888999999
Q ss_pred hhcCCCCCceeHHHHHHHHHhc
Q 010013 453 YFDKDNSGYITMEELEHALKKY 474 (520)
Q Consensus 453 ~~D~d~dG~I~~~El~~~l~~~ 474 (520)
.+|.|++|.|+++||..++...
T Consensus 85 ~~D~d~dG~I~~~EF~~~~~~~ 106 (135)
T 3h4s_E 85 EGDLDGDGALNQTEFCVLMVRL 106 (135)
T ss_dssp HHCSSCSSSBCHHHHHHHHHHH
T ss_pred HhCCCCCCCCcHHHHHHHHHHh
Confidence 9999999999999999999765
|
| >3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A | Back alignment and structure |
|---|
Probab=99.32 E-value=3.9e-12 Score=110.87 Aligned_cols=101 Identities=27% Similarity=0.349 Sum_probs=88.6
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC--CHHHHHHHH
Q 010013 409 SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG--DAKTIKEII 486 (520)
Q Consensus 409 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~--~~~~~~~~~ 486 (520)
.++..+|..+|.|++|.|+.+||..++.......+...+..+|+.+|.|++|.|+.+||..++...... ..+.+..+|
T Consensus 28 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F 107 (169)
T 3qrx_A 28 QEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAF 107 (169)
T ss_dssp HHHHHHHHHHCTTCCSEECHHHHHHHHHHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccCcHHHHHHHH
Confidence 457889999999999999999999988877666778899999999999999999999999988753222 356789999
Q ss_pred HHhcCCCCcceeHHHHHHHHHcC
Q 010013 487 AEVDIDNDGRINYEEFAAMMRKG 509 (520)
Q Consensus 487 ~~~d~~~dg~i~~~ef~~~l~~~ 509 (520)
..+|.|++|.|+.+||..++..-
T Consensus 108 ~~~D~d~~G~i~~~el~~~l~~~ 130 (169)
T 3qrx_A 108 RLFDDDNSGTITIKDLRRVAKEL 130 (169)
T ss_dssp HHHCTTCSSSBCHHHHHHHHHHT
T ss_pred HHhCCCCCCcCCHHHHHHHHHHc
Confidence 99999999999999999999863
|
| >3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A | Back alignment and structure |
|---|
Probab=99.31 E-value=5.2e-12 Score=112.62 Aligned_cols=99 Identities=22% Similarity=0.222 Sum_probs=87.2
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHH
Q 010013 409 SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAE 488 (520)
Q Consensus 409 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~ 488 (520)
.++..+|..+|.|++|.|+.+||..++.......+ ..+..+|+.+|.|++|.|+.+||..++........+.+..+|..
T Consensus 52 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~-~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~~~~l~~~F~~ 130 (191)
T 3k21_A 52 EKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDRKQLSKKLIYCAFRV 130 (191)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCC-TTHHHHHHHHCTTCSSSEEHHHHHHHHSCGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCcHHHHHHHHHHcCCCcH-HHHHHHHHHhCCCCCCeEeHHHHHHHHHhhhhccHHHHHHHHHH
Confidence 56888999999999999999999998876554445 77899999999999999999999998855444467889999999
Q ss_pred hcCCCCcceeHHHHHHHHHc
Q 010013 489 VDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 489 ~d~~~dg~i~~~ef~~~l~~ 508 (520)
+|.|++|.|+.+||..++..
T Consensus 131 ~D~d~~G~Is~~El~~~l~~ 150 (191)
T 3k21_A 131 FDVDNDGEITTAELAHILYN 150 (191)
T ss_dssp HSTTCSSCBCHHHHHHHHHH
T ss_pred hCCCCCCcCCHHHHHHHHHh
Confidence 99999999999999999976
|
| >3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A | Back alignment and structure |
|---|
Probab=99.30 E-value=6.5e-12 Score=108.39 Aligned_cols=100 Identities=14% Similarity=0.266 Sum_probs=88.5
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhc-CC-CCHHHHHHHH
Q 010013 409 SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY-NM-GDAKTIKEII 486 (520)
Q Consensus 409 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~-~~-~~~~~~~~~~ 486 (520)
.++..+|..+|.|++|.|+++||..++.......+...+..+|+.+|.|++|.|+.+||..++... .. ...+.+..+|
T Consensus 23 ~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F 102 (161)
T 3fwb_A 23 QEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAF 102 (161)
T ss_dssp HHHHHHHHHHCTTSSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcCCcHHHHHHHH
Confidence 457889999999999999999999988877666778889999999999999999999999988753 22 2467799999
Q ss_pred HHhcCCCCcceeHHHHHHHHHc
Q 010013 487 AEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 487 ~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..+|.|++|.|+.+||..+++.
T Consensus 103 ~~~D~d~~G~i~~~el~~~l~~ 124 (161)
T 3fwb_A 103 QLFDDDHTGKISIKNLRRVAKE 124 (161)
T ss_dssp HHHCTTCSSEECHHHHHHHHHH
T ss_pred HHHcCCCCCeEeHHHHHHHHHH
Confidence 9999999999999999999985
|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A | Back alignment and structure |
|---|
Probab=99.30 E-value=9.4e-12 Score=99.70 Aligned_cols=95 Identities=18% Similarity=0.197 Sum_probs=81.9
Q ss_pred hHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc---chhhhHHHHHHH
Q 010013 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM---NRVEREEHLYKA 450 (520)
Q Consensus 374 ~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~---~~~~~~~~~~~~ 450 (520)
++.++|+.+| ++|.|+.+||..++... ....++++.+|..+|.|++|.|+.+||..++... ....+.+++..+
T Consensus 10 e~~~l~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~ 85 (108)
T 2pvb_A 10 DVAAALAACS--AADSFKHKEFFAKVGLA--SKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAF 85 (108)
T ss_dssp HHHHHHHHTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHHHHHHH
T ss_pred HHHHHHHHhC--CCCcCcHHHHHHHHhCC--hhHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCCCCHHHHHHH
Confidence 4567777887 89999999999987542 3467889999999999999999999999988766 445678889999
Q ss_pred HhhhcCCCCCceeHHHHHHHHH
Q 010013 451 FEYFDKDNSGYITMEELEHALK 472 (520)
Q Consensus 451 F~~~D~d~dG~I~~~El~~~l~ 472 (520)
|+.+|.|++|.|+.+||..++.
T Consensus 86 ~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 2pvb_A 86 LADGDKDGDGMIGVDEFAAMIK 107 (108)
T ss_dssp HHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHhCCCCCCcEeHHHHHHHHh
Confidence 9999999999999999998875
|
| >1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... | Back alignment and structure |
|---|
Probab=99.30 E-value=4.5e-12 Score=109.46 Aligned_cols=100 Identities=27% Similarity=0.362 Sum_probs=85.8
Q ss_pred hHHHHhcccCCCCCCcccHHHHhhhhhhcC----CCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHH
Q 010013 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLG----TRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYK 449 (520)
Q Consensus 374 ~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~----~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~ 449 (520)
.+..+|+.+|.|++|.|+.+||..++.... .....+.+..+|..+|.|++|.|+.+||..++.......+.+.+..
T Consensus 56 ~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~~~~~~~ 135 (161)
T 1dtl_A 56 ELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEE 135 (161)
T ss_dssp HHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHH
T ss_pred HHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHH
Confidence 467889999999999999999999887754 2345677999999999999999999999998877665667888999
Q ss_pred HHhhhcCCCCCceeHHHHHHHHHh
Q 010013 450 AFEYFDKDNSGYITMEELEHALKK 473 (520)
Q Consensus 450 ~F~~~D~d~dG~I~~~El~~~l~~ 473 (520)
+|+.+|.|++|.|+.+||..++..
T Consensus 136 ~~~~~D~d~dg~i~~~eF~~~~~~ 159 (161)
T 1dtl_A 136 LMKDGDKNNDGRIDYDEFLEFMKG 159 (161)
T ss_dssp HHHHHCTTSSSEEEHHHHHHHHHC
T ss_pred HHHHhCCCCCCcEeHHHHHHHHHc
Confidence 999999999999999999998864
|
| >3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=99.30 E-value=6.6e-12 Score=110.80 Aligned_cols=98 Identities=17% Similarity=0.316 Sum_probs=85.0
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHH
Q 010013 409 SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAE 488 (520)
Q Consensus 409 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~ 488 (520)
.+++.+|..+|.|++|.|+++||..++..... ....+..+|+.+|.|++|.|+.+||..++.......++.+..+|..
T Consensus 39 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~--~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~F~~ 116 (180)
T 3mse_B 39 KYINELFYKLDTNHNGSLSHREIYTVLASVGI--KKWDINRILQALDINDRGNITYTEFMAGCYRWKNIESTFLKAAFNK 116 (180)
T ss_dssp HHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTC--CHHHHHHHHHHHCTTCCSEECHHHHHHHHSCCTTC--CHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCC--CHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhcccCCHHHHHHHHHH
Confidence 56889999999999999999999998876543 3477999999999999999999999998876554455689999999
Q ss_pred hcCCCCcceeHHHHHHHHHc
Q 010013 489 VDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 489 ~d~~~dg~i~~~ef~~~l~~ 508 (520)
+|.|++|.|+.+||..++..
T Consensus 117 ~D~d~~G~I~~~El~~~l~~ 136 (180)
T 3mse_B 117 IDKDEDGYISKSDIVSLVHD 136 (180)
T ss_dssp HCTTCSSCBCHHHHHHHTTT
T ss_pred HCCCCCCCCCHHHHHHHHcC
Confidence 99999999999999999873
|
| >2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.30 E-value=5.4e-12 Score=111.61 Aligned_cols=100 Identities=15% Similarity=0.198 Sum_probs=81.8
Q ss_pred HHHHHHHHHh-cCCCCCceehhhhHHHhhccc----hhhhHHHHH-----------HHHhhhcCCCCCceeHHHHHHHHH
Q 010013 409 SEVRQLMEAA-DVDGNGTIDYIEFITATMHMN----RVEREEHLY-----------KAFEYFDKDNSGYITMEELEHALK 472 (520)
Q Consensus 409 ~~~~~~~~~~-d~~~~g~i~~~ef~~~~~~~~----~~~~~~~~~-----------~~F~~~D~d~dG~I~~~El~~~l~ 472 (520)
.+++.+|..+ |.|++|.|+++||..++.... ...+...+. .+|+.+|.|++|.|+.+||..++.
T Consensus 8 ~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~ 87 (185)
T 2sas_A 8 QKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAMWE 87 (185)
T ss_dssp HHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHH
T ss_pred HHHHHHHHHheeCCCCCeEcHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHH
Confidence 5688999999 999999999999988776544 333444443 449999999999999999999887
Q ss_pred hcCC----------CCHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 473 KYNM----------GDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 473 ~~~~----------~~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.... .....+..+|..+|.|+||.|+++||..++..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~ 133 (185)
T 2sas_A 88 KTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKN 133 (185)
T ss_dssp HHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTS
T ss_pred HHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHH
Confidence 5421 13467899999999999999999999999865
|
| >2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.30 E-value=4.3e-12 Score=111.38 Aligned_cols=101 Identities=19% Similarity=0.244 Sum_probs=90.6
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC--CHHHHHHHH
Q 010013 409 SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG--DAKTIKEII 486 (520)
Q Consensus 409 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~--~~~~~~~~~ 486 (520)
++++++|..+|.|++|.|+++||..++.......+...+..+|..+|.|++|.|+..||..++...... .++++..+|
T Consensus 11 ~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~~~~~~l~~aF 90 (176)
T 2lhi_A 11 AEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAF 90 (176)
T ss_dssp GHHHHHHHTTCSSCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhcccCCcHHHHHHHH
Confidence 357889999999999999999999998887777888999999999999999999999999988765444 467799999
Q ss_pred HHhcCCCCcceeHHHHHHHHHcC
Q 010013 487 AEVDIDNDGRINYEEFAAMMRKG 509 (520)
Q Consensus 487 ~~~d~~~dg~i~~~ef~~~l~~~ 509 (520)
+.+|.|++|.|+.+||..++...
T Consensus 91 ~~fD~d~~G~I~~~el~~~l~~~ 113 (176)
T 2lhi_A 91 KVFDKNGDGLISAAELKHVLTSI 113 (176)
T ss_dssp HHHCSSCSSSBCHHHHHHHHHTT
T ss_pred HHhCCCCCCcCcHHHHHHHHHHc
Confidence 99999999999999999999863
|
| >3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A | Back alignment and structure |
|---|
Probab=99.30 E-value=5.8e-12 Score=98.42 Aligned_cols=66 Identities=12% Similarity=0.227 Sum_probs=59.0
Q ss_pred hHHHHHHHHhhhc-CCCC-CceeHHHHHHHHHh-c----CCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 443 REEHLYKAFEYFD-KDNS-GYITMEELEHALKK-Y----NMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 443 ~~~~~~~~F~~~D-~d~d-G~I~~~El~~~l~~-~----~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
....++.+|+.|| +|++ |+|+.+||+.++.. + |.. ++++++++|+.+|.|+||.|+|+||+.+|..
T Consensus 8 ~i~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~ 81 (101)
T 3nso_A 8 AVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLAC 81 (101)
T ss_dssp HHHHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 3467999999997 8987 99999999999986 4 445 7899999999999999999999999999865
|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A | Back alignment and structure |
|---|
Probab=99.30 E-value=1.1e-11 Score=99.57 Aligned_cols=101 Identities=19% Similarity=0.216 Sum_probs=84.8
Q ss_pred hhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc---chhh
Q 010013 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM---NRVE 442 (520)
Q Consensus 366 ~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~---~~~~ 442 (520)
.+++++ +.++|+.+| ++|.|+.+||..++... ....++++.+|..+|.|++|.|+.+||..++... ....
T Consensus 5 ~~t~~e---~~~~~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~ 77 (109)
T 1rwy_A 5 LLSAED---IKKAIGAFT--AADSFDHKKFFQMVGLK--KKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDL 77 (109)
T ss_dssp HSCHHH---HHHHHHTTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCC
T ss_pred cCCHHH---HHHHHHHcC--CCCcEeHHHHHHHHhcC--cchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCCC
Confidence 445544 567777888 89999999999987532 3467889999999999999999999999988765 4456
Q ss_pred hHHHHHHHHhhhcCCCCCceeHHHHHHHHHh
Q 010013 443 REEHLYKAFEYFDKDNSGYITMEELEHALKK 473 (520)
Q Consensus 443 ~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~ 473 (520)
+.+.+..+|+.+|.|++|.|+.+||..++..
T Consensus 78 ~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 1rwy_A 78 SAKETKTLMAAGDKDGDGKIGVEEFSTLVAE 108 (109)
T ss_dssp CHHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred CHHHHHHHHHHHCCCCCCcCCHHHHHHHHHc
Confidence 7788999999999999999999999988863
|
| >3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} | Back alignment and structure |
|---|
Probab=99.30 E-value=4.1e-12 Score=113.91 Aligned_cols=101 Identities=19% Similarity=0.257 Sum_probs=81.0
Q ss_pred hhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc--chhhhHHHHHHH
Q 010013 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM--NRVEREEHLYKA 450 (520)
Q Consensus 373 ~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~--~~~~~~~~~~~~ 450 (520)
.++..+|+.+|.|++|.|+.+||..++.........+.+..+|..+|.|++|.|+.+||..++... ....+.+.+..+
T Consensus 93 ~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~l 172 (197)
T 3pm8_A 93 PDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSL 172 (197)
T ss_dssp HHHHHHHHC-------CEEHHHHHHTTCCHHHHCSHHHHHHHHHHHCTTCSSEECHHHHHHHHC----CCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCCHHHHHHH
Confidence 346788999999999999999999988766555667889999999999999999999999998766 445677889999
Q ss_pred HhhhcCCCCCceeHHHHHHHHHh
Q 010013 451 FEYFDKDNSGYITMEELEHALKK 473 (520)
Q Consensus 451 F~~~D~d~dG~I~~~El~~~l~~ 473 (520)
|+.+|.|+||.|+++||..++..
T Consensus 173 ~~~~D~d~dG~Is~~EF~~~l~~ 195 (197)
T 3pm8_A 173 LQEVDLNGDGEIDFHEFMLMMSK 195 (197)
T ss_dssp HHHHCTTCSSSEEHHHHHHHHHC
T ss_pred HHHHcCCCCCcCcHHHHHHHHHc
Confidence 99999999999999999999864
|
| >2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A | Back alignment and structure |
|---|
Probab=99.29 E-value=5.8e-12 Score=110.95 Aligned_cols=100 Identities=24% Similarity=0.333 Sum_probs=88.1
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC--CHHHHHHHH
Q 010013 409 SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG--DAKTIKEII 486 (520)
Q Consensus 409 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~--~~~~~~~~~ 486 (520)
.+++.+|..+|.|++|.|+++||..++.......+...+..+|+.+|.|++|.|+.+||..++...... ..+.+..+|
T Consensus 11 ~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~F 90 (179)
T 2f2o_A 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAF 90 (179)
T ss_dssp HHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHccCcccHHHHHHHH
Confidence 568899999999999999999999988776666778889999999999999999999999988654221 446689999
Q ss_pred HHhcCCCCcceeHHHHHHHHHc
Q 010013 487 AEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 487 ~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..+|.|++|.|+.+||..++..
T Consensus 91 ~~~D~d~~G~I~~~E~~~~l~~ 112 (179)
T 2f2o_A 91 RVFDKDGNGYISAAELRHVMTN 112 (179)
T ss_dssp HHHCTTCSSEECHHHHHHHHHH
T ss_pred HHhCCCCCCcCcHHHHHHHHHH
Confidence 9999999999999999999876
|
| >2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A | Back alignment and structure |
|---|
Probab=99.29 E-value=4.5e-12 Score=96.92 Aligned_cols=74 Identities=32% Similarity=0.527 Sum_probs=66.4
Q ss_pred HhhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc
Q 010013 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (520)
Q Consensus 364 ~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 438 (520)
+..++++++.++..+|+.+|.|++|+|+.+||..++..+| ..+.++++.+|..+|.|++|.|+|+||+.++...
T Consensus 2 ~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 75 (86)
T 2opo_A 2 AAEDTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN 75 (86)
T ss_dssp ----CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred CccCCHhhHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHC
Confidence 4567888999999999999999999999999999999999 8999999999999999999999999999987644
|
| >2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A | Back alignment and structure |
|---|
Probab=99.29 E-value=9.9e-12 Score=106.94 Aligned_cols=100 Identities=10% Similarity=0.172 Sum_probs=87.6
Q ss_pred HHHHHHHHHhc-CCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCC------CCHHH
Q 010013 409 SEVRQLMEAAD-VDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNM------GDAKT 481 (520)
Q Consensus 409 ~~~~~~~~~~d-~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~------~~~~~ 481 (520)
.+++.+|..+| .|++|.|+.+||..++.......+...+..+|+.+|.|++|.|+.+||..++..... .....
T Consensus 13 ~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~ 92 (158)
T 2jnf_A 13 KLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQQE 92 (158)
T ss_dssp HHHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCCCCTTTTSST
T ss_pred HHHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccccchhhHHHH
Confidence 34788999999 999999999999998877666677888999999999999999999999999976432 23456
Q ss_pred HHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 482 IKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 482 ~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
+..+|..+|.|++|.|+.+||..++..
T Consensus 93 ~~~~F~~~D~d~~G~I~~~el~~~l~~ 119 (158)
T 2jnf_A 93 LREAFRLYDKEGNGYISTDVMREILAE 119 (158)
T ss_dssp HHHHHHHHCSSSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 899999999999999999999999976
|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=99.28 E-value=1.1e-11 Score=99.52 Aligned_cols=95 Identities=16% Similarity=0.189 Sum_probs=81.3
Q ss_pred hHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc---chhhhHHHHHHH
Q 010013 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM---NRVEREEHLYKA 450 (520)
Q Consensus 374 ~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~---~~~~~~~~~~~~ 450 (520)
++.++|+.+| ++|.|+.+||..++... ....+++..+|..+|.|++|.|+.+||..++... ....+.+++..+
T Consensus 11 e~~~~~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~ 86 (109)
T 1bu3_A 11 DVAAALKACE--AADSFNYKAFFAKVGLT--AKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAF 86 (109)
T ss_dssp HHHHHHHHTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCCCCCHHHHHHH
T ss_pred HHHHHHHHhC--CCCcCcHHHHHHHHHcC--hhhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCCCCHHHHHHH
Confidence 4567777787 89999999999987542 3467889999999999999999999999988766 445678889999
Q ss_pred HhhhcCCCCCceeHHHHHHHHH
Q 010013 451 FEYFDKDNSGYITMEELEHALK 472 (520)
Q Consensus 451 F~~~D~d~dG~I~~~El~~~l~ 472 (520)
|+.+|.|++|.|+.+||..++.
T Consensus 87 ~~~~D~~~dg~i~~~eF~~~~~ 108 (109)
T 1bu3_A 87 LKAGDSDGDGAIGVDEWAALVK 108 (109)
T ss_dssp HHHHCTTCSSEECHHHHHHHHT
T ss_pred HHHhCCCCCCcEeHHHHHHHHh
Confidence 9999999999999999998774
|
| >1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A | Back alignment and structure |
|---|
Probab=99.28 E-value=1.2e-11 Score=99.03 Aligned_cols=100 Identities=19% Similarity=0.234 Sum_probs=83.1
Q ss_pred hhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc---chhh
Q 010013 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM---NRVE 442 (520)
Q Consensus 366 ~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~---~~~~ 442 (520)
.++.++ +.++|+.+| ++|.|+.+||..++... ....+++..+|..+|.|++|.|+.+||..++... ....
T Consensus 5 ~~t~~e---~~~~~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~ 77 (108)
T 1rro_A 5 ILSAED---IAAALQECQ--DPDTFEPQKFFQTSGLS--KMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDAREL 77 (108)
T ss_dssp TSCHHH---HHHHHHHTC--STTCCCHHHHHHHHSGG--GSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCC
T ss_pred cCCHHH---HHHHHHHcc--CCCCcCHHHHHHHHhcC--cccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccCCC
Confidence 344544 566777777 89999999999887532 3467889999999999999999999999988766 3446
Q ss_pred hHHHHHHHHhhhcCCCCCceeHHHHHHHHH
Q 010013 443 REEHLYKAFEYFDKDNSGYITMEELEHALK 472 (520)
Q Consensus 443 ~~~~~~~~F~~~D~d~dG~I~~~El~~~l~ 472 (520)
+.+++..+|+.+|.|++|.|+.+||..++.
T Consensus 78 ~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 1rro_A 78 TESETKSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp CHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred CHHHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence 778899999999999999999999998764
|
| >1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A | Back alignment and structure |
|---|
Probab=99.28 E-value=7.3e-12 Score=106.49 Aligned_cols=99 Identities=7% Similarity=0.158 Sum_probs=85.3
Q ss_pred hHHHHhccc-CCCCCCcccHHHHhhhhhhc------CCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHH
Q 010013 374 GLKEMFKSM-DTDNSGTITFEELKAGLPKL------GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEH 446 (520)
Q Consensus 374 ~l~~~F~~~-D~~~~g~i~~~e~~~~l~~~------~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~ 446 (520)
++..+|..+ |.+++|.|+.+||..++... ......+.+..+|..+|.|++|.|+.+||..++.......+.+.
T Consensus 41 ~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~ 120 (148)
T 1m45_A 41 LVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAE 120 (148)
T ss_dssp HHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHH
T ss_pred HHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhccccccccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHH
Confidence 467889999 99999999999999988776 44556688999999999999999999999999887666667888
Q ss_pred HHHHHhhhcCCCCCceeHHHHHHHHH
Q 010013 447 LYKAFEYFDKDNSGYITMEELEHALK 472 (520)
Q Consensus 447 ~~~~F~~~D~d~dG~I~~~El~~~l~ 472 (520)
+..+|+.+|.|++|.|+.+||..++.
T Consensus 121 ~~~~~~~~d~d~dg~i~~~eF~~~~~ 146 (148)
T 1m45_A 121 VDELLKGVEVDSNGEIDYKKFIEDVL 146 (148)
T ss_dssp HHHHHTTCCCCTTSEEEHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 99999999999999999999998875
|
| >1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.28 E-value=4e-12 Score=113.00 Aligned_cols=100 Identities=21% Similarity=0.278 Sum_probs=88.1
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHH
Q 010013 409 SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIA 487 (520)
Q Consensus 409 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~ 487 (520)
.++..+|..+|.|++|.|+++||..++.......+...+..+|+.+|.|++|.|+.+||..++..+... ..+.+..+|.
T Consensus 10 ~~l~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~l~~~F~ 89 (188)
T 1s6i_A 10 GGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREENLVSAFS 89 (188)
T ss_dssp CSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCCCSTHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 357899999999999999999999988876666677889999999999999999999999998766443 4456899999
Q ss_pred HhcCCCCcceeHHHHHHHHHc
Q 010013 488 EVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 488 ~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.+|.|++|.|+.+||..++..
T Consensus 90 ~~D~d~dG~Is~~El~~~l~~ 110 (188)
T 1s6i_A 90 YFDKDGSGYITLDEIQQACKD 110 (188)
T ss_dssp HTTTTCSSEEEHHHHHHTTTT
T ss_pred HHCCCCCCcCcHHHHHHHHHH
Confidence 999999999999999998864
|
| >3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A | Back alignment and structure |
|---|
Probab=99.27 E-value=8.8e-12 Score=106.46 Aligned_cols=100 Identities=19% Similarity=0.321 Sum_probs=87.7
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC------CHHHH
Q 010013 409 SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG------DAKTI 482 (520)
Q Consensus 409 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~------~~~~~ 482 (520)
.++..+|..+|.|++|.|+++||..++.......+...+..+|+.+|.|++|.|+.+||..++...... ..+.+
T Consensus 11 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~ 90 (153)
T 3ox6_A 11 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKEL 90 (153)
T ss_dssp HHHHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCHHHHCHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhccccccccHHHH
Confidence 347788999999999999999999988877666778889999999999999999999999998754322 24678
Q ss_pred HHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 483 KEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 483 ~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..+|..+|.|++|.|+.+||..++..
T Consensus 91 ~~~F~~~D~d~~G~i~~~el~~~l~~ 116 (153)
T 3ox6_A 91 RDAFREFDTNGDGEISTSELREAMRA 116 (153)
T ss_dssp HHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 99999999999999999999999876
|
| >2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.27 E-value=7.2e-12 Score=108.82 Aligned_cols=100 Identities=20% Similarity=0.276 Sum_probs=87.1
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHH
Q 010013 409 SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIA 487 (520)
Q Consensus 409 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~ 487 (520)
.++..+|..+|.|++|.|+++||..++.......+...+..+|+.+|.|++|.|+.+||..++...... ..+.+..+|.
T Consensus 27 ~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~ 106 (166)
T 2aao_A 27 AGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFT 106 (166)
T ss_dssp HHHHHHHHHHCTTCCSSBCHHHHHHHGGGGTCCCCHHHHHHHHHHHCTTCCSSBCHHHHHHHHTTCHHHHTTHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhcccHHHHHHHHH
Confidence 347789999999999999999999988876666677889999999999999999999999988654322 4567999999
Q ss_pred HhcCCCCcceeHHHHHHHHHc
Q 010013 488 EVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 488 ~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.+|.|++|.|+.+||..++..
T Consensus 107 ~~D~d~~G~i~~~e~~~~l~~ 127 (166)
T 2aao_A 107 YFDKDGSGYITPDELQQACEE 127 (166)
T ss_dssp HHCTTCSSSBCHHHHHHHTCC
T ss_pred HhCCCCCCcCcHHHHHHHHHH
Confidence 999999999999999999864
|
| >2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A | Back alignment and structure |
|---|
Probab=99.27 E-value=1.1e-11 Score=113.83 Aligned_cols=116 Identities=18% Similarity=0.237 Sum_probs=89.9
Q ss_pred cccHHHHhhhhhhcCCCCCH---HHHHHHHHHhcCC--CCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCcee
Q 010013 389 TITFEELKAGLPKLGTRLSE---SEVRQLMEAADVD--GNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYIT 463 (520)
Q Consensus 389 ~i~~~e~~~~l~~~~~~~~~---~~~~~~~~~~d~~--~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~ 463 (520)
.++.+++..+....+ ++. .++..+|..+|.| ++|.|+.+||..++.. ........+..+|+.+|.|++|.|+
T Consensus 27 ~l~~~~~~~l~~~~~--ls~~ei~~l~~~F~~~D~d~~~~G~I~~~El~~~l~~-~~~~~~~~~~~~f~~~D~d~dG~I~ 103 (226)
T 2zfd_A 27 SGGLGDPELLARDTV--FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK-TNKKESLFADRVFDLFDTKHNGILG 103 (226)
T ss_dssp -----CTHHHHHHSS--CCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHS-CSSCCCHHHHHHHHHHCSSCSSSBC
T ss_pred cCCHHHHHHHHHhCC--CCHHHHHHHHHHHHHhCcccCCCCeEcHHHHHHHHhc-cCcccHHHHHHHHHHHcCCCCCcCc
Confidence 355566666665544 233 3467788999999 9999999999998764 2222334577899999999999999
Q ss_pred HHHHHHHHHhcCCC--CHHHHHHHHHHhcCCCCcceeHHHHHHHHH
Q 010013 464 MEELEHALKKYNMG--DAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507 (520)
Q Consensus 464 ~~El~~~l~~~~~~--~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~ 507 (520)
.+||..++...... ..+.+..+|..+|.|++|.|+++||..++.
T Consensus 104 ~~Ef~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~ 149 (226)
T 2zfd_A 104 FEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVV 149 (226)
T ss_dssp HHHHHHHHHHTSTTSCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHHHccCCCHHHHHHHHHHHhCCCCCCcccHHHHHHHHH
Confidence 99999999887643 566799999999999999999999999985
|
| >1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A | Back alignment and structure |
|---|
Probab=99.27 E-value=1.8e-11 Score=98.39 Aligned_cols=102 Identities=20% Similarity=0.325 Sum_probs=84.7
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc---chh
Q 010013 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM---NRV 441 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~---~~~ 441 (520)
..++.++ +.++|+.+| ++|.|+.+||..++.. .....++++.+|..+|.|++|.|+.+||..++... ...
T Consensus 5 ~~~t~~e---~~~~~~~~d--~~g~i~~~ef~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~ 77 (110)
T 1pva_A 5 DLLKADD---IKKALDAVK--AEGSFNHKKFFALVGL--KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRD 77 (110)
T ss_dssp HHSCHHH---HHHHHHHTC--STTCCCHHHHHHHHTC--TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCC
T ss_pred ccCCHHH---HHHHHHhcC--CCCcCcHHHHHHHHcc--CcchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCCC
Confidence 3445544 567777777 8999999999998743 23467889999999999999999999999988766 445
Q ss_pred hhHHHHHHHHhhhcCCCCCceeHHHHHHHHHh
Q 010013 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKK 473 (520)
Q Consensus 442 ~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~ 473 (520)
.+.+++..+|+.+|.|++|.|+.+||..++..
T Consensus 78 ~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 109 (110)
T 1pva_A 78 LTDAETKAFLKAADKDGDGKIGIDEFETLVHE 109 (110)
T ss_dssp CCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred CCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence 67788999999999999999999999988763
|
| >3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* | Back alignment and structure |
|---|
Probab=99.27 E-value=1.5e-11 Score=105.42 Aligned_cols=103 Identities=21% Similarity=0.368 Sum_probs=86.8
Q ss_pred hHHHHhcccCCCCCCcccHHHHhhhhhhcCCC-CCHHHHHHHHHHhcCCCCCceehhhhHHHhhc-cchhhhHHHHHHHH
Q 010013 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGTR-LSESEVRQLMEAADVDGNGTIDYIEFITATMH-MNRVEREEHLYKAF 451 (520)
Q Consensus 374 ~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~-~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~-~~~~~~~~~~~~~F 451 (520)
.+..+|+.+|.+++|.|+.+||..++...... ...+.+..+|..+|.|++|.|+.+||..++.. .....+...+..+|
T Consensus 39 ~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~ 118 (155)
T 3ll8_B 39 LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIV 118 (155)
T ss_dssp THHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHGGGSCHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccCCCHHHHHHHH
Confidence 46778999999999999999999999876544 45577999999999999999999999998876 34455566666666
Q ss_pred hh----hcCCCCCceeHHHHHHHHHhcCC
Q 010013 452 EY----FDKDNSGYITMEELEHALKKYNM 476 (520)
Q Consensus 452 ~~----~D~d~dG~I~~~El~~~l~~~~~ 476 (520)
+. +|.|++|.|+.+||..++..++.
T Consensus 119 ~~~~~~~D~~~dg~i~~~eF~~~~~~~~~ 147 (155)
T 3ll8_B 119 DKTIINADKDGDGRISFEEFCAVVGGLDI 147 (155)
T ss_dssp HHHHHHHCTTSSSSBCHHHHHHHHGGGCG
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHhccCc
Confidence 66 99999999999999999987754
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.27 E-value=1.1e-11 Score=116.23 Aligned_cols=136 Identities=13% Similarity=0.125 Sum_probs=98.2
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCC-CeeEEEEEEEeCCeEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR-NIVELKGAYEDRHSVNL 145 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp-~iv~l~~~~~~~~~~~l 145 (520)
..|.+....+.|..+.||++.. .+|..+++|+.... ....+.+|+.+++.+..+. .+++++++...++..++
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~------~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~ 92 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG------ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWL 92 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSC------TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEE
T ss_pred CCCceEecccCCCCceEEEEec-CCCCeEEEEeCCcc------cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEE
Confidence 3455544445667799999965 45678999987542 1245778999999998552 25678988888888999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcC-------------------------------------
Q 010013 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG------------------------------------- 188 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~------------------------------------- 188 (520)
||||++|.+|. .. ... ...++.+++..|..||+..
T Consensus 93 v~e~i~G~~l~--~~---~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (264)
T 1nd4_A 93 LLGEVPGQDLL--SS---HLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQG 164 (264)
T ss_dssp EEECCSSEETT--TS---CCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTT
T ss_pred EEEecCCcccC--cC---cCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccC
Confidence 99999998883 21 122 2356677777788887643
Q ss_pred ---------------------CeeecCCCCcEEeecCCCCCCeeEeecccccc
Q 010013 189 ---------------------VMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (520)
Q Consensus 189 ---------------------ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 220 (520)
++|+|++|.||+++ ++..+.|+|||.+..
T Consensus 165 ~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~---~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 165 LAPAELFARLKARMPDGEDLVVTHGDACLPNIMVE---NGRFSGFIDCGRLGV 214 (264)
T ss_dssp CCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEE---TTEEEEECCCTTCEE
T ss_pred ccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEE---CCcEEEEEcchhccc
Confidence 99999999999995 334456999998764
|
| >2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} | Back alignment and structure |
|---|
Probab=99.26 E-value=1e-11 Score=96.32 Aligned_cols=86 Identities=33% Similarity=0.572 Sum_probs=73.1
Q ss_pred hhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchh---hh
Q 010013 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRV---ER 443 (520)
Q Consensus 367 ~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~---~~ 443 (520)
.+++...++.++|+.+|.|++|+|+.+||..++..++..++.+++..+|..+|.|++|.|+|+||+.++...... ..
T Consensus 3 ~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~~~ 82 (92)
T 2kn2_A 3 MDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVRGGGGGNG 82 (92)
T ss_dssp CCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHHTTTCCCHH
T ss_pred CCccHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhccCCCCCch
Confidence 345677889999999999999999999999999999999999999999999999999999999999987643322 23
Q ss_pred HHHHHHHHh
Q 010013 444 EEHLYKAFE 452 (520)
Q Consensus 444 ~~~~~~~F~ 452 (520)
.++++.+|+
T Consensus 83 ~~~l~~aF~ 91 (92)
T 2kn2_A 83 WSRLRRKFS 91 (92)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhc
Confidence 456666664
|
| >2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} | Back alignment and structure |
|---|
Probab=99.26 E-value=1.2e-11 Score=110.07 Aligned_cols=100 Identities=16% Similarity=0.227 Sum_probs=82.0
Q ss_pred HHHHHHHHHh-cCCCCCceehhhhHHHhhcc----chhhhHHHHHHHH-----------hhhcCCCCCceeHHHHHHHHH
Q 010013 409 SEVRQLMEAA-DVDGNGTIDYIEFITATMHM----NRVEREEHLYKAF-----------EYFDKDNSGYITMEELEHALK 472 (520)
Q Consensus 409 ~~~~~~~~~~-d~~~~g~i~~~ef~~~~~~~----~~~~~~~~~~~~F-----------~~~D~d~dG~I~~~El~~~l~ 472 (520)
.+++.+|..+ |.|++|.|+++||..++... ....+...+..+| +.+|.|++|.|+.+||..++.
T Consensus 12 ~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~ 91 (191)
T 2ccm_A 12 NKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVTKEEWLKMWA 91 (191)
T ss_dssp HHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHH
T ss_pred HHHHHhccccccCCCCCeeeHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeECHHHHHHHHH
Confidence 4588999999 99999999999999887654 3333444555555 999999999999999999887
Q ss_pred hcCC--------C--CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 473 KYNM--------G--DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 473 ~~~~--------~--~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.... . ....+..+|..+|.|+||.|+++||..++..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~ 137 (191)
T 2ccm_A 92 ECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMS 137 (191)
T ss_dssp HHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHT
T ss_pred HHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 6521 1 3467899999999999999999999999865
|
| >1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... | Back alignment and structure |
|---|
Probab=99.26 E-value=1.3e-11 Score=106.58 Aligned_cols=100 Identities=25% Similarity=0.348 Sum_probs=87.1
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-----CHHHHH
Q 010013 409 SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-----DAKTIK 483 (520)
Q Consensus 409 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-----~~~~~~ 483 (520)
.++..+|..+|.|++|.|+++||..++.......+...+..+|+.+|.|++|.|+.+||..++...... ..+.+.
T Consensus 20 ~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~ 99 (162)
T 1top_A 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELA 99 (162)
T ss_dssp HHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhccccccccHHHHH
Confidence 457889999999999999999999988776666678889999999999999999999999988654211 345688
Q ss_pred HHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 484 EIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 484 ~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.+|..+|.|++|.|+.+||..++..
T Consensus 100 ~~F~~~D~d~~G~I~~~e~~~~l~~ 124 (162)
T 1top_A 100 NCFRIFDKNADGFIDIEELGEILRA 124 (162)
T ss_dssp HHHHHHCTTCSSCBCHHHHHHHHHT
T ss_pred HHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 9999999999999999999999976
|
| >1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.25 E-value=1.4e-11 Score=89.02 Aligned_cols=63 Identities=25% Similarity=0.545 Sum_probs=59.1
Q ss_pred HHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 446 HLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 446 ~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.++.+|+.+|.|++|+|+.+||..++..++.. +.+++..+|..+|.|+||.|+|+||+.++.+
T Consensus 2 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~ 65 (67)
T 1tiz_A 2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK 65 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 46889999999999999999999999999887 8889999999999999999999999999874
|
| >2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} | Back alignment and structure |
|---|
Probab=99.25 E-value=1.7e-11 Score=95.28 Aligned_cols=69 Identities=41% Similarity=0.705 Sum_probs=63.6
Q ss_pred hhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 440 RVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 440 ~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.....+.++.+|+.||.|++|+|+.+||+.++..+|.. ++++++++|..+|.|+||.|+|+||+.++..
T Consensus 24 ~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~~ 93 (94)
T 2kz2_A 24 DTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 93 (94)
T ss_dssp CCSCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence 34567789999999999999999999999999999987 8899999999999999999999999999864
|
| >2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
Probab=99.25 E-value=2.6e-11 Score=102.60 Aligned_cols=100 Identities=14% Similarity=0.211 Sum_probs=87.5
Q ss_pred CCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcC--CC-CHHHH
Q 010013 406 LSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYN--MG-DAKTI 482 (520)
Q Consensus 406 ~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~--~~-~~~~~ 482 (520)
++.++++.+|..+|.|++|.|+.+||..++.......+...+..+|+. |++|.|+.+||..++.... .. ....+
T Consensus 2 ls~~el~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~---~~~g~i~~~eF~~~~~~~~~~~~~~~~~l 78 (145)
T 2bl0_B 2 ASADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQ---LNAKEFDLATFKTVYRKPIKTPTEQSKEM 78 (145)
T ss_dssp CCHHHHHHHHHHHCTTCSSCEEGGGHHHHHHHTTCCCCHHHHHHHHHH---HTSSEECHHHHHHHHTSCCCCGGGGHHHH
T ss_pred CCHHHHHHHHHHhCCCCcCccCHHHHHHHHHHhCCCCCHHHHHHHHHh---cCCCeEcHHHHHHHHHHHhhcCcccHHHH
Confidence 456679999999999999999999999988776666677788888888 8999999999999997753 22 56789
Q ss_pred HHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 483 KEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 483 ~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..+|..+|.|++|.|+.+||..++..
T Consensus 79 ~~~F~~~D~d~~G~i~~~e~~~~l~~ 104 (145)
T 2bl0_B 79 LDAFRALDKEGNGTIQEAELRQLLLN 104 (145)
T ss_dssp HHHHHHHCSSSSSEEEHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 99999999999999999999999976
|
| >3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C | Back alignment and structure |
|---|
Probab=99.25 E-value=4.7e-12 Score=106.98 Aligned_cols=98 Identities=23% Similarity=0.266 Sum_probs=49.7
Q ss_pred hHHHHhcccCCCCCCcccHHHHhhhhhhcCC-----CCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccc--------h
Q 010013 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGT-----RLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN--------R 440 (520)
Q Consensus 374 ~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~-----~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~--------~ 440 (520)
.-...|+.+|.|++|.|+.+||..++..+.. ....+++..+|..+|.|++|.|+++||..++.... .
T Consensus 28 ~~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~g~ 107 (143)
T 3a4u_B 28 ASFSQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAP 107 (143)
T ss_dssp -----------------------------------CCCHHHHHHHHHHHTCTTCSSCEEHHHHHHTCC------------
T ss_pred CCHHHHHHhCCCCCCcCcHHHHHHHHHHHhcccccccCHHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhccccCC
Confidence 3457999999999999999999998876522 13356789999999999999999999998876542 1
Q ss_pred hhhHHH----HHHHHhhhcCCCCCceeHHHHHHHH
Q 010013 441 VEREEH----LYKAFEYFDKDNSGYITMEELEHAL 471 (520)
Q Consensus 441 ~~~~~~----~~~~F~~~D~d~dG~I~~~El~~~l 471 (520)
..+.++ +..+|+.+|.|+||.|+.+||..++
T Consensus 108 ~~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~ 142 (143)
T 3a4u_B 108 LMSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSL 142 (143)
T ss_dssp -CCHHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence 222333 4667799999999999999998765
|
| >1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... | Back alignment and structure |
|---|
Probab=99.24 E-value=2.3e-11 Score=104.45 Aligned_cols=99 Identities=16% Similarity=0.216 Sum_probs=87.9
Q ss_pred HHHHHHHHHhcC--CCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCC---CCHHHHH
Q 010013 409 SEVRQLMEAADV--DGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNM---GDAKTIK 483 (520)
Q Consensus 409 ~~~~~~~~~~d~--~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~---~~~~~~~ 483 (520)
.+++.+|..+|. |++|.|+++||..++.......+...+..+ +.+|.|++|.|+.+||..++..... ...+.+.
T Consensus 9 ~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~ 87 (156)
T 1wdc_C 9 DDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYM 87 (156)
T ss_dssp HHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTSCCCCHHHHH
T ss_pred HHHHHHHHHHccCCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHHhhccCChHHHHH
Confidence 357889999999 999999999999988776666677788888 9999999999999999999987643 3678899
Q ss_pred HHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 484 EIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 484 ~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.+|..+|.|++|.|+.+||..++..
T Consensus 88 ~~F~~~D~d~~G~I~~~el~~~l~~ 112 (156)
T 1wdc_C 88 EAFKTFDREGQGFISGAELRHVLTA 112 (156)
T ss_dssp HHHHTTCSSSSSEEEHHHHHHHHHH
T ss_pred HHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 9999999999999999999999986
|
| >1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A | Back alignment and structure |
|---|
Probab=99.23 E-value=1.7e-11 Score=94.60 Aligned_cols=74 Identities=35% Similarity=0.551 Sum_probs=69.5
Q ss_pred HHhhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhh
Q 010013 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (520)
Q Consensus 363 i~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 436 (520)
+...++++++.++..+|+.+|.|++|+|+.+||..++..+|..++.++++.+|..+|.|++|.|+|+||+.++.
T Consensus 10 ~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~ 83 (90)
T 1avs_A 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMV 83 (90)
T ss_dssp HHHHBCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence 45678889999999999999999999999999999999999999999999999999999999999999998775
|
| >2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* | Back alignment and structure |
|---|
Probab=99.22 E-value=5.4e-11 Score=101.02 Aligned_cols=99 Identities=13% Similarity=0.145 Sum_probs=87.6
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhh---cCCCCCceeHHHHHHHHHhc---CCC-CHHH
Q 010013 409 SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYF---DKDNSGYITMEELEHALKKY---NMG-DAKT 481 (520)
Q Consensus 409 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~---D~d~dG~I~~~El~~~l~~~---~~~-~~~~ 481 (520)
.++..+|..+|.|++|.|+++||..++.......+...+..+|+.+ |.|+ |.|+.+||..++... ... ....
T Consensus 8 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~~~~~~~~ 86 (149)
T 2mys_C 8 DDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNKDQGTFED 86 (149)
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccCCcchHHH
Confidence 4578899999999999999999999887766667788899999999 9999 999999999999775 222 5677
Q ss_pred HHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 482 IKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 482 ~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
+..+|..+|.|++|.|+.+||..++..
T Consensus 87 ~~~~F~~~D~d~~G~i~~~el~~~l~~ 113 (149)
T 2mys_C 87 FVEGLRVFDKEGNGTVMGAELRHVLAT 113 (149)
T ss_pred HHHHHHHhCCCCCceEcHHHHHHHHHH
Confidence 999999999999999999999999976
|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.22 E-value=2.4e-11 Score=109.26 Aligned_cols=100 Identities=20% Similarity=0.273 Sum_probs=84.5
Q ss_pred HHHHhcccCCCCCCcccHHHHhhhhhhcCC-----------------CCCHHHHHHHHHHhcCCCCCceehhhhHHHhhc
Q 010013 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGT-----------------RLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (520)
Q Consensus 375 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~-----------------~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 437 (520)
+..+|..+|.|++|.|+.+||..++..... ....+.+..+|..+|.|++|.|+.+||..++..
T Consensus 63 ~~~l~~~~D~d~dg~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~ 142 (202)
T 2bec_A 63 GDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRL 142 (202)
T ss_dssp HHHHHHTTSCSSCCCCCHHHHHHHHGGGSCCCHHHHC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhcccchhcccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 678899999999999999999999877652 344577999999999999999999999998876
Q ss_pred c-chhhhHHHHHHHHhh----hcCCCCCceeHHHHHHHHHhc
Q 010013 438 M-NRVEREEHLYKAFEY----FDKDNSGYITMEELEHALKKY 474 (520)
Q Consensus 438 ~-~~~~~~~~~~~~F~~----~D~d~dG~I~~~El~~~l~~~ 474 (520)
. ....+.+.+..+|+. +|.|+||.|+++||..++...
T Consensus 143 ~~g~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~ 184 (202)
T 2bec_A 143 MVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEKM 184 (202)
T ss_dssp SCCSCCCHHHHHHHHHHHHHHHCSSCSSSEEHHHHHHTTTTS
T ss_pred hcCCCCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHh
Confidence 6 544556666666666 999999999999999888654
|
| >2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A | Back alignment and structure |
|---|
Probab=99.22 E-value=2.6e-11 Score=96.72 Aligned_cols=67 Identities=13% Similarity=0.408 Sum_probs=59.6
Q ss_pred hhHHHHHHHHhhhc-CCCCC-ceeHHHHHHHHHh-----cCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 442 EREEHLYKAFEYFD-KDNSG-YITMEELEHALKK-----YNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 442 ~~~~~~~~~F~~~D-~d~dG-~I~~~El~~~l~~-----~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
...+.++.+|+.|| +|++| +|+.+||+.+|.. +|.. ++++++++|..+|.|+||.|+|+||+.+|..
T Consensus 19 ~~~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~ 93 (113)
T 2lnk_A 19 KALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC 93 (113)
T ss_dssp HHHHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 34567999999999 89997 9999999999986 5555 6788999999999999999999999998875
|
| >1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A | Back alignment and structure |
|---|
Probab=99.21 E-value=3.6e-11 Score=92.71 Aligned_cols=66 Identities=33% Similarity=0.563 Sum_probs=61.8
Q ss_pred hHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 443 REEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 443 ~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
....++.+|+.||.|++|+|+.+||..++..+|.. +.+++..+|..+|.|+||.|+|+||+.++..
T Consensus 18 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~ 84 (90)
T 1avs_A 18 MIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84 (90)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 45678999999999999999999999999999987 8899999999999999999999999999875
|
| >2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.21 E-value=1.7e-11 Score=89.78 Aligned_cols=66 Identities=41% Similarity=0.674 Sum_probs=61.3
Q ss_pred hHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 443 REEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 443 ~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..+.++.+|+.+|.|++|+|+.+||..++..+|.. +.+++..+|..+|.|+||.|+|+||+.++..
T Consensus 4 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 70 (71)
T 2b1u_A 4 GLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLAQ 70 (71)
T ss_dssp THHHHHHHHTTSCCSSSSEEEHHHHHHHGGGTTCSSCHHHHHHHHHHCCSSSSSEEETTHHHHHHTC
T ss_pred cHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhh
Confidence 45679999999999999999999999999999877 8889999999999999999999999998863
|
| >3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.21 E-value=4.2e-11 Score=94.24 Aligned_cols=66 Identities=14% Similarity=0.395 Sum_probs=57.9
Q ss_pred hHHHHHHHHhhhc-CCCC-CceeHHHHHHHHHh-cC----CC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 443 REEHLYKAFEYFD-KDNS-GYITMEELEHALKK-YN----MG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 443 ~~~~~~~~F~~~D-~d~d-G~I~~~El~~~l~~-~~----~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
....++.+|+.|| .|++ |+|+.+||+.+|.. ++ .. ++++++++|+.+|.|+||.|+|+||+.+|..
T Consensus 11 ~~~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~ 84 (104)
T 3zwh_A 11 ALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSS 84 (104)
T ss_dssp HHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence 4467999999997 7785 89999999999986 54 33 7889999999999999999999999999865
|
| >2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} | Back alignment and structure |
|---|
Probab=99.20 E-value=3.9e-11 Score=89.47 Aligned_cols=66 Identities=26% Similarity=0.573 Sum_probs=61.2
Q ss_pred hHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 443 REEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 443 ~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
....++.+|+.+|.|++|+|+.+||+.++..+|.. +.+++..+|..+|.|++|.|+|+||+.++..
T Consensus 5 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 71 (77)
T 2joj_A 5 QKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTE 71 (77)
T ss_dssp HHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTH
T ss_pred HHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 45678999999999999999999999999999887 7888999999999999999999999999865
|
| >4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=4.4e-11 Score=92.33 Aligned_cols=66 Identities=14% Similarity=0.381 Sum_probs=57.0
Q ss_pred hHHHHHHHHhhhc-CCCC-CceeHHHHHHHHHh-cC----CC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 443 REEHLYKAFEYFD-KDNS-GYITMEELEHALKK-YN----MG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 443 ~~~~~~~~F~~~D-~d~d-G~I~~~El~~~l~~-~~----~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..+.++.+|+.|| .||+ |+|+.+||+.+++. +| .. ++++++++++.+|.|+||.|+|+||+.+|..
T Consensus 8 ~~~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~ 81 (93)
T 4eto_A 8 ALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC 81 (93)
T ss_dssp HHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH
Confidence 3467999999998 6885 89999999999985 54 23 6889999999999999999999999999864
|
| >2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} | Back alignment and structure |
|---|
Probab=99.20 E-value=1.8e-11 Score=91.35 Aligned_cols=70 Identities=36% Similarity=0.622 Sum_probs=65.5
Q ss_pred hhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhh
Q 010013 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (520)
Q Consensus 367 ~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 436 (520)
++++++.++.++|+.+|.|++|+|+.+||..++..+|..++.++++.+|..+|.|++|.|+|+||+.++.
T Consensus 1 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~ 70 (77)
T 2joj_A 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMT 70 (77)
T ss_dssp CCHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 3567888999999999999999999999999999999999999999999999999999999999998775
|
| >2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} | Back alignment and structure |
|---|
Probab=99.20 E-value=3.5e-11 Score=108.76 Aligned_cols=100 Identities=17% Similarity=0.185 Sum_probs=83.9
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHhhccch--hhhHHHHHHHH-------hhhcCCCCCceeHHHHHHHHH-------
Q 010013 409 SEVRQLMEAADVDGNGTIDYIEFITATMHMNR--VEREEHLYKAF-------EYFDKDNSGYITMEELEHALK------- 472 (520)
Q Consensus 409 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~--~~~~~~~~~~F-------~~~D~d~dG~I~~~El~~~l~------- 472 (520)
.++..+|..+|.|++|.|+.+||..++..... ..+.+.+..+| +.+|.|++|.|+.+||..++.
T Consensus 36 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~~~~~~~~~~~ 115 (208)
T 2hpk_A 36 SRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEANRVFAEAER 115 (208)
T ss_dssp CHHHHHHHHHCTTCSSEECHHHHTHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCBTTTBEEGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhhhh
Confidence 35789999999999999999999998876544 45566777777 999999999999999999886
Q ss_pred --hcCCC--CHHH-HHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 473 --KYNMG--DAKT-IKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 473 --~~~~~--~~~~-~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.+... ..++ +..+|..+|.|++|.|+.+||..++..
T Consensus 116 ~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~ 156 (208)
T 2hpk_A 116 ERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKA 156 (208)
T ss_dssp HHHHTTCCCHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred hhhccCChHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence 33322 2334 788999999999999999999999865
|
| >1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C | Back alignment and structure |
|---|
Probab=99.20 E-value=1.3e-11 Score=105.22 Aligned_cols=100 Identities=16% Similarity=0.195 Sum_probs=86.0
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCC--CCCceeHHHHHHHHHhcCCC----CHHHH
Q 010013 409 SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKD--NSGYITMEELEHALKKYNMG----DAKTI 482 (520)
Q Consensus 409 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d--~dG~I~~~El~~~l~~~~~~----~~~~~ 482 (520)
.+++.+|..+|.|++|.|+++||..++.......+...+..+|+.+|.| ++|.|+.+||..++...... ..+.+
T Consensus 10 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~l 89 (151)
T 1w7j_B 10 EEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYEDY 89 (151)
T ss_dssp -CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--------CC
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhccCCCCcHHHH
Confidence 3478999999999999999999999887766666788899999999999 99999999999999875432 34567
Q ss_pred HHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 483 KEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 483 ~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..+|..+|.|++|.|+.+||..++..
T Consensus 90 ~~~F~~~D~d~~G~I~~~el~~~l~~ 115 (151)
T 1w7j_B 90 LEGFRVFDKEGNGKVMGAELRHVLTT 115 (151)
T ss_dssp HHHHHTTCTTSSSEEEHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 88999999999999999999999986
|
| >2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A | Back alignment and structure |
|---|
Probab=99.19 E-value=6.7e-11 Score=90.29 Aligned_cols=66 Identities=30% Similarity=0.555 Sum_probs=61.5
Q ss_pred hHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHcC
Q 010013 443 REEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRKG 509 (520)
Q Consensus 443 ~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~~ 509 (520)
....++.+|+.+|.|++|+|+.+||+.++..+| . +.+++..+|..+|.|+||.|+|+||+.++...
T Consensus 9 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 75 (86)
T 2opo_A 9 DIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN 75 (86)
T ss_dssp HHHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHC
Confidence 456799999999999999999999999999999 6 88999999999999999999999999999863
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A | Back alignment and structure |
|---|
Probab=99.19 E-value=4.9e-11 Score=106.06 Aligned_cols=100 Identities=17% Similarity=0.238 Sum_probs=80.7
Q ss_pred HHHHHHHHHhcCCCCCceehhhhH-----HHhhccchhhhHH-----HHHHHHhhhcCCCCCceeHHHHHHHHHhcCC--
Q 010013 409 SEVRQLMEAADVDGNGTIDYIEFI-----TATMHMNRVEREE-----HLYKAFEYFDKDNSGYITMEELEHALKKYNM-- 476 (520)
Q Consensus 409 ~~~~~~~~~~d~~~~g~i~~~ef~-----~~~~~~~~~~~~~-----~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~-- 476 (520)
.+++.+|..+|.|++|.|+++||. .++.......+.. .+..+|+.+|.|++|.|+.+||..++.....
T Consensus 16 ~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~ 95 (191)
T 1uhk_A 16 GRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKKLATDE 95 (191)
T ss_dssp HHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhccCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHHHHHHHhcch
Confidence 457899999999999999999998 5665554444444 6889999999999999999999988765311
Q ss_pred ------CCHHHHH----HHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 477 ------GDAKTIK----EIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 477 ------~~~~~~~----~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
...+.++ .+|..+|.|++|.|+.+||..++..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~ 137 (191)
T 1uhk_A 96 LEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKA 137 (191)
T ss_dssp HHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred hhhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHH
Confidence 1112233 8999999999999999999999875
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=99.18 E-value=2.4e-11 Score=125.54 Aligned_cols=121 Identities=21% Similarity=0.276 Sum_probs=94.2
Q ss_pred CcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccc--------hhhhHHHHHHHHhhhcCCCC
Q 010013 388 GTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN--------RVEREEHLYKAFEYFDKDNS 459 (520)
Q Consensus 388 g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~--------~~~~~~~~~~~F~~~D~d~d 459 (520)
.++....+..+...+......++++++|..+|.|++|.|+++||..++.... .......+..+|+.+|.|+|
T Consensus 334 ~kl~~a~l~~i~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~d 413 (504)
T 3q5i_A 334 QKLAQAAILFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKN 413 (504)
T ss_dssp SHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHC--CCSCCCHHHHHHHHHHHHCTTCS
T ss_pred HHHHHHHHHHhhccCCcHHHHHHHHHHHHeeCCCCCCeEcHHHHHHHHHHhhhcccccccccccHHHHHHHHHHhCCCCC
Confidence 3444333333333332222345689999999999999999999988776542 23567889999999999999
Q ss_pred CceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 460 GYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 460 G~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
|.|+.+||..++...... .++++..+|+.+|.|+||.|+.+||..++..
T Consensus 414 G~I~~~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~ 463 (504)
T 3q5i_A 414 GYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGL 463 (504)
T ss_dssp SSEEHHHHHHHHSCHHHHTCHHHHHHHHHHHCTTCCSEECHHHHHHHTTC
T ss_pred CcEeHHHHHHHHHhhhcccCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhh
Confidence 999999999988654332 6788999999999999999999999999864
|
| >1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 | Back alignment and structure |
|---|
Probab=99.18 E-value=4.3e-11 Score=95.26 Aligned_cols=84 Identities=14% Similarity=0.254 Sum_probs=71.0
Q ss_pred ceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHH
Q 010013 425 TIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFA 503 (520)
Q Consensus 425 ~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~ 503 (520)
.++++++...+.... ......++.+|+.||.|++|+|+.+||+.++..+|.. ++++++++|..+|.|++|.|+|+||+
T Consensus 5 ~~~~~~~~~~l~~~~-~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~e~~~l~~~~d~~~~g~i~~~eF~ 83 (105)
T 1wlz_A 5 ATADRDILARLHKAV-TSHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFL 83 (105)
T ss_dssp TTCCHHHHHHHHHHH-HHTHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHH
T ss_pred chhHHHHHHHHHHHH-HchHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCCCcHHHHH
Confidence 456777776654432 2346689999999999999999999999999999987 88999999999999999999999999
Q ss_pred HHHHcC
Q 010013 504 AMMRKG 509 (520)
Q Consensus 504 ~~l~~~ 509 (520)
.++...
T Consensus 84 ~~~~~~ 89 (105)
T 1wlz_A 84 SRFSSE 89 (105)
T ss_dssp HHHC--
T ss_pred HHHhcc
Confidence 999863
|
| >3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A | Back alignment and structure |
|---|
Probab=99.18 E-value=4.9e-11 Score=126.71 Aligned_cols=123 Identities=11% Similarity=0.185 Sum_probs=103.5
Q ss_pred ccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHh-------cCCCCCceehhhhHHHhhccchhhhHHHHHHHHhh
Q 010013 381 SMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAA-------DVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEY 453 (520)
Q Consensus 381 ~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~-------d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~ 453 (520)
.+|+|+||.|+.+|+.+.+...+. ...++..+++.+ |.+++|.|+|+||..++..+. ...+++.+|+.
T Consensus 163 ~fd~n~dG~Is~kEl~~~l~~~~~--~~~el~~~~~~~~~~~~k~D~~~~g~L~FeEF~~f~~~L~---~R~EI~eiF~~ 237 (816)
T 3qr0_A 163 TTVEMEKNKIPVKAIQKCLSKDKD--DRARISKALEKIGWPSGKNDAIDLKAFDFDTFFKFYLALL---ERSEIEGIFKE 237 (816)
T ss_dssp HHTSCCSSEEEHHHHHHHHCSCHH--HHHHHHHHHHHHTSCCSTTCEEETTTCCHHHHHHHHHHHC---CCTHHHHHHHH
T ss_pred hccCCCCCCCCHHHHHHHHHhcCC--hHHHHHHHHHHhcccccccccCCCCcCCHHHHHHHHHhcC---CHHHHHHHHHH
Confidence 478999999999999998876542 145688889888 577889999999999887543 23479999999
Q ss_pred hcCCCCCceeHHHHHHHHHhcCCC-----------CHHHHHHHHHHhcC--C----CCcceeHHHHHHHHHcC
Q 010013 454 FDKDNSGYITMEELEHALKKYNMG-----------DAKTIKEIIAEVDI--D----NDGRINYEEFAAMMRKG 509 (520)
Q Consensus 454 ~D~d~dG~I~~~El~~~l~~~~~~-----------~~~~~~~~~~~~d~--~----~dg~i~~~ef~~~l~~~ 509 (520)
||.|++|.||. ||..+|...+.. +.+++++++..++. + ++|.|++++|..+|...
T Consensus 238 y~~dg~~~mT~-eL~~FL~~~Q~E~~~~~~~~~~~t~e~~~~iI~kye~~~~~~~~~~g~LsldgF~~yL~S~ 309 (816)
T 3qr0_A 238 LSKNKGNITTV-MFRDFLNDMQRHPSLHKTLFPLYTDAQCEALINDYESAVNKKGKKKGQLTKEGLLYFLMCE 309 (816)
T ss_dssp HTTTSSSEEHH-HHHHHHHHTSSCTTSCTTTSCCCCHHHHHHHHHHHHHHHHGGGCBTTEECHHHHHHHHHSG
T ss_pred HccCCCCcccH-HHHHHHHHhCCccccccccccccCHHHHHHHHHHhccccchhhhccCCccHHHHHHHhhcc
Confidence 99999999999 999999987632 47789999999876 5 78999999999999864
|
| >1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.18 E-value=7.8e-11 Score=91.06 Aligned_cols=65 Identities=20% Similarity=0.348 Sum_probs=59.0
Q ss_pred hHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 443 REEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 443 ~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
....++.+|+.||+|++|+|+.+|++.++..+|. +++++.+++..+|.|+||.|+|+||+.+|..
T Consensus 7 ~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g~-~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~ 71 (92)
T 1fi6_A 7 QRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKL-PILELSHIWELSDFDKDGALTLDEFCAAFHL 71 (92)
T ss_dssp HHHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHSS-CHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCC-CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Confidence 3567889999999999999999999999998874 5778999999999999999999999998864
|
| >2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} | Back alignment and structure |
|---|
Probab=99.17 E-value=9.9e-11 Score=90.62 Aligned_cols=68 Identities=41% Similarity=0.736 Sum_probs=62.4
Q ss_pred hhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHcC
Q 010013 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRKG 509 (520)
Q Consensus 442 ~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~~ 509 (520)
...+.++.+|+.||.|++|+|+.+||+.++..+|.. +.+++..+|..+|.|+||.|+|+||+.++...
T Consensus 6 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~ 74 (92)
T 2kn2_A 6 DAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTV 74 (92)
T ss_dssp HHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhc
Confidence 345679999999999999999999999999999987 88899999999999999999999999998763
|
| >1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=3.5e-11 Score=107.46 Aligned_cols=101 Identities=22% Similarity=0.341 Sum_probs=79.6
Q ss_pred hHHHHhcccCCCCCCcccHHHHhhhhhhcCC-------CCCHHHHH----HHHHHhcCCCCCceehhhhHHHhhccchhh
Q 010013 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGT-------RLSESEVR----QLMEAADVDGNGTIDYIEFITATMHMNRVE 442 (520)
Q Consensus 374 ~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~-------~~~~~~~~----~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~ 442 (520)
.+..+|+.+|.|++|.|+.+||..++..+.. ....+.++ .+|..+|.|++|.|+.+||..++.......
T Consensus 67 ~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~ 146 (195)
T 1qv0_A 67 CVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISP 146 (195)
T ss_dssp HHHHHHHHTTCCTTCCBCHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCC
T ss_pred HHHHHHHHcCCCCCceEcHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCC
Confidence 4788999999999999999999988765421 11112233 899999999999999999999887665556
Q ss_pred hHHHHHHHHhhhcCCCCCceeHHHHHHHHHhc
Q 010013 443 REEHLYKAFEYFDKDNSGYITMEELEHALKKY 474 (520)
Q Consensus 443 ~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~ 474 (520)
+.+.+..+|+.+|.|++|.|+.+||..++..+
T Consensus 147 ~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 178 (195)
T 1qv0_A 147 SQEDCEATFRHCDLDNAGDLDVDEMTRQHLGF 178 (195)
T ss_dssp CHHHHHHHHHHSCCCTTSCEEHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH
Confidence 77889999999999999999999999888654
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=2.3e-11 Score=125.34 Aligned_cols=102 Identities=20% Similarity=0.334 Sum_probs=86.6
Q ss_pred CHHHHHHHHHHhcCCCCCceehhhhHHHhhccch--------hhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-
Q 010013 407 SESEVRQLMEAADVDGNGTIDYIEFITATMHMNR--------VEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG- 477 (520)
Q Consensus 407 ~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~--------~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~- 477 (520)
..++++++|..+|.|++|.|+++||..++..... ......+..+|+.+|.|++|.|+.+||..++...+..
T Consensus 344 ~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~G~I~~~EF~~~~~~~~~~~ 423 (494)
T 3lij_A 344 ETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLL 423 (494)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHHT
T ss_pred HHHHHHHHHHHhCcCCCCeEcHHHHHHHHHHhcccccccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhhccc
Confidence 3456899999999999999999999987765422 3457789999999999999999999999988654333
Q ss_pred CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 478 DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 478 ~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.++++..+|+.+|.|+||.|+++||..++..
T Consensus 424 ~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~ 454 (494)
T 3lij_A 424 SKDKLESAFQKFDQDGNGKISVDELASVFGL 454 (494)
T ss_dssp CHHHHHHHHHHHCTTCSSEECHHHHHHHC-C
T ss_pred cHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 6778999999999999999999999998864
|
| >2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio} | Back alignment and structure |
|---|
Probab=99.17 E-value=9.6e-11 Score=91.70 Aligned_cols=66 Identities=17% Similarity=0.406 Sum_probs=58.9
Q ss_pred hHHHHHHHHhhhc-CCCCC-ceeHHHHHHHHHh-----cCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 443 REEHLYKAFEYFD-KDNSG-YITMEELEHALKK-----YNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 443 ~~~~~~~~F~~~D-~d~dG-~I~~~El~~~l~~-----~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..+.++.+|+.|| .|++| +|+.+||+.++.. +|.. ++++++++|..+|.|+||.|+|+||+.+|..
T Consensus 8 ~~~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~ 81 (99)
T 2y5i_A 8 AMDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAA 81 (99)
T ss_dssp HHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 3567999999997 89998 9999999999986 5555 7889999999999999999999999998864
|
| >1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 | Back alignment and structure |
|---|
Probab=99.17 E-value=5.1e-11 Score=89.09 Aligned_cols=63 Identities=30% Similarity=0.639 Sum_probs=58.7
Q ss_pred HHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 445 EHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 445 ~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
++++.+|+.+|.|++|+|+.+||..++..+| . +++++..+|..+|.|+||.|+|+||+.++..
T Consensus 3 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~ 66 (78)
T 1k9u_A 3 DDMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFISFCNA 66 (78)
T ss_dssp CHHHHHHHHHCTTCSSEECHHHHHHHHHHHH-TCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC-CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 4688999999999999999999999999988 6 8889999999999999999999999999876
|
| >3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A | Back alignment and structure |
|---|
Probab=99.16 E-value=3e-11 Score=94.37 Aligned_cols=69 Identities=19% Similarity=0.321 Sum_probs=61.5
Q ss_pred HHHHhhHHHHhcccC-CCCC-CcccHHHHhhhhhh-----cCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhc
Q 010013 369 EEEIMGLKEMFKSMD-TDNS-GTITFEELKAGLPK-----LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (520)
Q Consensus 369 ~~~~~~l~~~F~~~D-~~~~-g~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 437 (520)
+..+.+|.++|+.|| .|++ |+|+.+||..++.. +|...+.++++.+++.+|.|+||.|+|+||+.++..
T Consensus 6 e~~i~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~ 81 (101)
T 3nso_A 6 EQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLAC 81 (101)
T ss_dssp HHHHHHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 456778999999997 8887 99999999999986 467788999999999999999999999999987653
|
| >1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.16 E-value=5e-11 Score=92.17 Aligned_cols=68 Identities=25% Similarity=0.298 Sum_probs=62.8
Q ss_pred hhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhh
Q 010013 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (520)
Q Consensus 367 ~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 436 (520)
++++++.++.++|+.+|.|++|+|+.+|+..++..++ .+.+++..++..+|.|++|.|+|+||+.++.
T Consensus 3 ls~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g--~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~ 70 (92)
T 1fi6_A 3 ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSK--LPILELSHIWELSDFDKDGALTLDEFCAAFH 70 (92)
T ss_dssp CCHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHS--SCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcC--CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence 4677889999999999999999999999999999886 6788999999999999999999999998765
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} | Back alignment and structure |
|---|
Probab=99.16 E-value=1.3e-11 Score=88.94 Aligned_cols=62 Identities=23% Similarity=0.375 Sum_probs=55.5
Q ss_pred HHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 447 LYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 447 ~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
++.+|+.+|.|++|.|+.+||..++..++.. ++++++.+|..+|.|+||.|+|+||+.++..
T Consensus 2 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~ 64 (66)
T 3li6_A 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64 (66)
T ss_dssp CCHHHHHHCTTCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHTC
T ss_pred HHHHHHHHCCCCCCcccHHHHHHHHHHccCCCcHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence 3578999999999999999999999988766 6778999999999999999999999998864
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=99.16 E-value=9.6e-11 Score=115.45 Aligned_cols=142 Identities=21% Similarity=0.365 Sum_probs=104.4
Q ss_pred cceeeccCCeEEEEEEEcCCCcEEEEEEec--ccccCCcccHHHHHHHHHHHHhccC-CCCeeEEEEEEEeC---CeEEE
Q 010013 72 GRELGRGQFGVTYLVTHKDTKQQFACKSIS--SRKLINRDDVEDVRREVQIMHHLTG-HRNIVELKGAYEDR---HSVNL 145 (520)
Q Consensus 72 ~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~--~~~~~~~~~~~~~~~e~~~l~~l~~-hp~iv~l~~~~~~~---~~~~l 145 (520)
.+.|+.|.++.||++... +..+++|+.. ..... .....+.+|+.+++.|.. +..+++++.++.+. +..++
T Consensus 43 ~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~--~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~ 118 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLL--PSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFY 118 (359)
T ss_dssp EEECCC-CCSCEEEEECS--SCEEEEECCCC------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEE
T ss_pred EEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCC--CcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEE
Confidence 567899999999998764 3678899775 32211 123567889999999974 34578889888766 45889
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---------------------------------------
Q 010013 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS--------------------------------------- 186 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~--------------------------------------- 186 (520)
||||++|..+.+.. ...++......++.+++..|..||+
T Consensus 119 vme~v~G~~l~~~~--~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (359)
T 3dxp_A 119 IMEFVSGRVLWDQS--LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA 196 (359)
T ss_dssp EEECCCCBCCCCTT--CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred EEEecCCeecCCCc--cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence 99999998875421 1246788888999999999999997
Q ss_pred -------------------cCCeeecCCCCcEEeecCCCCCCeeEeecccccc
Q 010013 187 -------------------MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (520)
Q Consensus 187 -------------------~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 220 (520)
.+++|+|+++.|||++.++ ...+.|+||+.+..
T Consensus 197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~-~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTE-PRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSS-SCEEEECCCTTCEE
T ss_pred HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCC-CcEEEEECcccccc
Confidence 3589999999999996322 13468999998764
|
| >1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A | Back alignment and structure |
|---|
Probab=99.16 E-value=3.7e-11 Score=90.61 Aligned_cols=67 Identities=30% Similarity=0.544 Sum_probs=61.4
Q ss_pred hhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcC-CC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHcC
Q 010013 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYN-MG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRKG 509 (520)
Q Consensus 442 ~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~-~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~~ 509 (520)
.....++ +|+.||.|++|+|+.+||..++..+| .. +.+++..+|..+|.|++|.|+|+||+.++...
T Consensus 6 ~~~~~l~-~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 74 (81)
T 1c7v_A 6 DEEEILR-AFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKKS 74 (81)
T ss_dssp -CHHHHH-HHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHCC
T ss_pred cHHHHHH-HHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhh
Confidence 4466789 99999999999999999999999998 76 88999999999999999999999999999864
|
| >3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ... | Back alignment and structure |
|---|
Probab=99.16 E-value=1.1e-10 Score=90.27 Aligned_cols=65 Identities=17% Similarity=0.401 Sum_probs=58.9
Q ss_pred hHHHHHHHHhhhcCCCCC---ceeHHHHHHHHHh-----cCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 443 REEHLYKAFEYFDKDNSG---YITMEELEHALKK-----YNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 443 ~~~~~~~~F~~~D~d~dG---~I~~~El~~~l~~-----~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..+.++.+|+.|| ++|| +|+.+||+.+++. +|.. ++++++++|+.+|.|+||.|+|+||+.+|..
T Consensus 7 ~~~~l~~~F~~~D-~~dG~~g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~ 80 (92)
T 3rm1_A 7 AVVALIDVFHQYS-GREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFVAM 80 (92)
T ss_dssp HHHHHHHHHHHHH-TSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc-cCCCCcCeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence 3467899999999 7777 9999999999998 7776 8899999999999999999999999999865
|
| >1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.15 E-value=7e-11 Score=91.92 Aligned_cols=64 Identities=19% Similarity=0.322 Sum_probs=58.5
Q ss_pred hHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcceeHHHHHHHHH
Q 010013 443 REEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507 (520)
Q Consensus 443 ~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~ 507 (520)
....++.+|+.||+|+||+|+.+|++.++..++. +++++.+++..+|.|+||.|+|+||+.+|.
T Consensus 8 ~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g~-~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~ 71 (95)
T 1c07_A 8 EKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGL-PSTLLAHIWSLCDTKDCGKLSKDQFALAFH 71 (95)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTTC-CHHHHHHHHHHHCTTCSSSEETTTHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCC-CHHHHHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence 4567899999999999999999999999998874 677899999999999999999999999884
|
| >2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.15 E-value=1.3e-10 Score=89.80 Aligned_cols=66 Identities=24% Similarity=0.363 Sum_probs=60.1
Q ss_pred hhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 442 ~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.....++.+|+.||.|++|+|+.+||..++..+| .+.++++.+|..+|.|+||.|+|+||+.++.+
T Consensus 24 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g-~~~~~~~~~~~~~D~d~dg~I~~~EF~~~~~~ 89 (91)
T 2pmy_A 24 EELARLRSVFAACDANRSGRLEREEFRALCTELR-VRPADAEAVFQRLDADRDGAITFQEFARGFLG 89 (91)
T ss_dssp HHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTT-CCHHHHHHHHHHHCTTCSSEECHHHHTHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcC-cCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHH
Confidence 3456789999999999999999999999999998 46788999999999999999999999998864
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=4.8e-11 Score=122.62 Aligned_cols=102 Identities=22% Similarity=0.269 Sum_probs=89.5
Q ss_pred HhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHH
Q 010013 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAF 451 (520)
Q Consensus 372 ~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F 451 (520)
..++.++|+.+|.|++|.|+.+||..++.......+.+++..+|+.+|.|++|.|+.+||..++.. ...+.+++..+|
T Consensus 381 ~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~--~~~~~~~~~~~~ 458 (484)
T 3nyv_A 381 EHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGV--SDVDSETWKSVL 458 (484)
T ss_dssp HHHHHHHHHHHTCCTTSEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHH--TTCCHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCeEeHHHHHHHHHhccccCcHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh--cCCCHHHHHHHH
Confidence 356789999999999999999999998877655556788999999999999999999999998765 335677899999
Q ss_pred hhhcCCCCCceeHHHHHHHHHhcC
Q 010013 452 EYFDKDNSGYITMEELEHALKKYN 475 (520)
Q Consensus 452 ~~~D~d~dG~I~~~El~~~l~~~~ 475 (520)
+.+|.|+||.|+.+||..++..+.
T Consensus 459 ~~~D~d~dG~i~~~Ef~~~~~~~~ 482 (484)
T 3nyv_A 459 SEVDKNNDGEVDFDEFQQMLLKLC 482 (484)
T ss_dssp HHHCTTCCSEEEHHHHHHHHHHTT
T ss_pred HHhcCCCCCcCCHHHHHHHHHhhh
Confidence 999999999999999999998753
|
| >1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A | Back alignment and structure |
|---|
Probab=99.15 E-value=8.5e-11 Score=91.35 Aligned_cols=66 Identities=17% Similarity=0.447 Sum_probs=54.9
Q ss_pred hHHHHHHHHhhhc-CCC-CCceeHHHHHHHHHh-----cCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 443 REEHLYKAFEYFD-KDN-SGYITMEELEHALKK-----YNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 443 ~~~~~~~~F~~~D-~d~-dG~I~~~El~~~l~~-----~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..+.++.+|+.|| .|+ +|+|+.+||+.+++. +|.. ++++++++|+.+|.|+||.|+|+||+.+|..
T Consensus 7 ~~~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~ 80 (95)
T 1j55_A 7 AMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAA 80 (95)
T ss_dssp HHHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence 3567899999999 798 589999999999986 4544 6678999999999999999999999998864
|
| >3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C | Back alignment and structure |
|---|
Probab=99.15 E-value=9.9e-11 Score=100.75 Aligned_cols=98 Identities=16% Similarity=0.189 Sum_probs=83.7
Q ss_pred HHHHHHHHhcC--CCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCC----CCHHHHH
Q 010013 410 EVRQLMEAADV--DGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNM----GDAKTIK 483 (520)
Q Consensus 410 ~~~~~~~~~d~--~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~----~~~~~~~ 483 (520)
+++++|..+|. |++|.|+..||..++..++...+..++..++. .|.+++|.|+++||..++..... ...+++.
T Consensus 10 elre~F~~fD~~~d~dG~I~~~El~~~lr~lG~~~t~~el~~~~~-~d~~~~g~i~f~eFl~~~~~~~~~~~~~~~~~l~ 88 (159)
T 3i5g_C 10 EVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGG-TKKMGEKAYKLEEILPIYEEMSSKDTGTAADEFM 88 (159)
T ss_dssp HHHHHHHHHHHHTTSSSCEEGGGHHHHHHHTTCCCCHHHHHTTTC-CSSTTSCEECHHHHHHHHHHHTTCCTTCCHHHHH
T ss_pred HHHHHHHHHCcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHc-ccccCCCcccHHHHHHHHHHhhcccccchHHHHH
Confidence 46778999985 89999999999999887777777888887665 47889999999999998876432 2577899
Q ss_pred HHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 484 EIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 484 ~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
++|+.+|.|++|.|+.+||..+|++
T Consensus 89 ~aF~~fD~d~~G~I~~~el~~~l~~ 113 (159)
T 3i5g_C 89 EAFKTFDREGQGLISSAEIRNVLKM 113 (159)
T ss_dssp HHHHHHCTTSSSEECHHHHHHHHHH
T ss_pred HHHHHHhcCCCCcCcHHHHHHHHHH
Confidence 9999999999999999999999986
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=3.6e-11 Score=123.61 Aligned_cols=103 Identities=21% Similarity=0.324 Sum_probs=76.2
Q ss_pred HhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHH
Q 010013 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAF 451 (520)
Q Consensus 372 ~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F 451 (520)
...+..+|..+|.|++|.|+.+||..++.........+++..+|..+|.|++|.|+.+||..++.......+.+++..+|
T Consensus 380 ~~~~~~~~~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~~~~~~~~~ 459 (486)
T 3mwu_A 380 EDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESII 459 (486)
T ss_dssp HHHHHHHHHHHCTTCCSSBCHHHHHHHHSCTTTTCCHHHHHHHHHHHCSSCSSSBCSSCC--------------------
T ss_pred HHHHHHHHHHhcCCCCCcCcHHHHHHHHHhhhccchHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHH
Confidence 45678999999999999999999998887766667888999999999999999999999999888766667778899999
Q ss_pred hhhcCCCCCceeHHHHHHHHHhc
Q 010013 452 EYFDKDNSGYITMEELEHALKKY 474 (520)
Q Consensus 452 ~~~D~d~dG~I~~~El~~~l~~~ 474 (520)
+.+|.|+||.|+.+||..++..+
T Consensus 460 ~~~D~d~dG~I~~~EF~~~~~~~ 482 (486)
T 3mwu_A 460 EQVDNNKDGEVDFNEFVEMLQNF 482 (486)
T ss_dssp CCCCSSCSSSBCHHHHHHHHHHH
T ss_pred HHhCCCCCCcEeHHHHHHHHHHh
Confidence 99999999999999999998765
|
| >1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=1.6e-10 Score=102.09 Aligned_cols=97 Identities=15% Similarity=0.283 Sum_probs=80.2
Q ss_pred HHhcccCCCCCCc-ccHHHHhhhhhhcCCCCC-HHHHHHHHHHhcCCCCCceehhhhHHHhhccch-----hhhHHHHHH
Q 010013 377 EMFKSMDTDNSGT-ITFEELKAGLPKLGTRLS-ESEVRQLMEAADVDGNGTIDYIEFITATMHMNR-----VEREEHLYK 449 (520)
Q Consensus 377 ~~F~~~D~~~~g~-i~~~e~~~~l~~~~~~~~-~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~-----~~~~~~~~~ 449 (520)
++|..+|.|++|. |+.+||..++..+..... .+.+..+|..+|.|++|.|+.+||..++..... ..+.+.+..
T Consensus 64 ~l~~~~D~d~~G~~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~ 143 (183)
T 1dgu_A 64 RICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQ 143 (183)
T ss_dssp HHHHHHSCSSSSCCCCHHHHHHHHHHHSTTCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSSSCCCHHHHHHHHH
T ss_pred HHHHHhCCCCCCCEecHHHHHHHHHHhcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcccccCCCCHHHHHH
Confidence 3566789999999 999999999887654433 468999999999999999999999998765543 345555554
Q ss_pred ----HHhhhcCCCCCceeHHHHHHHHHh
Q 010013 450 ----AFEYFDKDNSGYITMEELEHALKK 473 (520)
Q Consensus 450 ----~F~~~D~d~dG~I~~~El~~~l~~ 473 (520)
+|+.+|.|++|.|+.+||..++..
T Consensus 144 ~~~~~~~~~D~d~dG~I~~~EF~~~~~~ 171 (183)
T 1dgu_A 144 LIDNILEESDIDRDGTINLSEFQHVISR 171 (183)
T ss_dssp HHHHHHHHHCTTSSSEEEHHHHHHHHCS
T ss_pred HHHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence 999999999999999999988853
|
| >4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.14 E-value=3.2e-11 Score=97.22 Aligned_cols=64 Identities=25% Similarity=0.523 Sum_probs=57.5
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHh-----cCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKK-----YNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~-----~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
-+.++.+|+.||.| +|+||.+||+.+|+. ++.. ++++++++|+.+|.|+||.|+|+||+.+|..
T Consensus 14 ie~l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~ 83 (121)
T 4drw_A 14 METMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAG 83 (121)
T ss_dssp HHHHHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTTSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence 46789999999988 899999999999976 5655 7788999999999999999999999999864
|
| >1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.13 E-value=5.4e-11 Score=92.54 Aligned_cols=68 Identities=22% Similarity=0.271 Sum_probs=62.6
Q ss_pred hhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhh
Q 010013 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (520)
Q Consensus 367 ~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 436 (520)
+++++++++.++|+.+|.|++|+|+.+|+..++..++ .+.++++.++..+|.|++|.|+|+||+.++.
T Consensus 4 ls~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g--~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~ 71 (95)
T 1c07_A 4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTG--LPSTLLAHIWSLCDTKDCGKLSKDQFALAFH 71 (95)
T ss_dssp SCSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTT--CCHHHHHHHHHHHCTTCSSSEETTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcC--CCHHHHHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence 4677888999999999999999999999999999886 6789999999999999999999999998764
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=99.13 E-value=9.1e-11 Score=112.76 Aligned_cols=182 Identities=16% Similarity=0.218 Sum_probs=124.1
Q ss_pred cceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCC--eeEEEEEEEeCC---eEEEE
Q 010013 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN--IVELKGAYEDRH---SVNLI 146 (520)
Q Consensus 72 ~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~--iv~l~~~~~~~~---~~~lv 146 (520)
.+.++.|.++.||++. ..+++|+.... .....+.+|+.+++.+..+.. +++++....... ..|+|
T Consensus 25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~~-----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~v 94 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN-----RDFIFKFPKHS-----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAG 94 (304)
T ss_dssp CCEEEECSSEEEEEST-----TSEEEEEESSH-----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEE
T ss_pred eEecCCCCcceEEEEC-----CEEEEEecCCc-----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEE
Confidence 3568999999999863 45889986422 335678999999999853433 445555543333 34789
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH----------------------------------------
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS---------------------------------------- 186 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~---------------------------------------- 186 (520)
|++++|.+|.+... ..++......++.+++..|..||+
T Consensus 95 m~~i~G~~l~~~~~--~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (304)
T 3sg8_A 95 FTKIKGVPLTPLLL--NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKK 172 (304)
T ss_dssp EECCCCEECCHHHH--HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred EcccCCeECCcccc--ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHH
Confidence 99999998875443 246778888889999999998886
Q ss_pred ------------------cCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCcccccccCCCc---cCchhhc--
Q 010013 187 ------------------MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYY---VAPEVLR-- 243 (520)
Q Consensus 187 ------------------~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y---~aPE~~~-- 243 (520)
..++|+|++|.||+++.+ ....+.|+||+.+....+..... ....+ .+|+...
T Consensus 173 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~-~~~~~~~iD~~~~~~~~~~~Dl~---~~~~~~~~~~~~~~~~~ 248 (304)
T 3sg8_A 173 VDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTE-KNTICGIIDFGDAAISDPDNDFI---SLMEDDEEYGMEFVSKI 248 (304)
T ss_dssp HHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETT-TTEEEEECCCTTCEEECTTHHHH---TTCCTTTSCCHHHHHHH
T ss_pred HHHHHHHHHhccccccCCceeEeCCCCcccEEEeCC-CCCEEEEEeCCCCccCChHHHHH---HHHhhccccCHHHHHHH
Confidence 136999999999999632 14457899999887643221111 11111 2333221
Q ss_pred -ccCCC------------cchhHHHHHHHHHHhhCCCCC
Q 010013 244 -RNYGA------------EADIWSAGVILYILLSGVPPF 269 (520)
Q Consensus 244 -~~~~~------------~~Dv~slG~~l~~ll~g~~pf 269 (520)
..|.. ..+.|+++.++|.+.+|..+|
T Consensus 249 l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 249 LNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 11211 258999999999999998876
|
| >2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A | Back alignment and structure |
|---|
Probab=99.13 E-value=6.4e-11 Score=92.07 Aligned_cols=66 Identities=21% Similarity=0.383 Sum_probs=58.5
Q ss_pred hHHHHHHHHhhhc-CCCCC-ceeHHHHHHHHHh-----cCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 443 REEHLYKAFEYFD-KDNSG-YITMEELEHALKK-----YNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 443 ~~~~~~~~F~~~D-~d~dG-~I~~~El~~~l~~-----~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..+.++.+|+.|| +|++| +|+.+||+.+++. +|.. ++++++++++.+|.|+||.|+|+||+.+|..
T Consensus 10 ~~~~l~~~F~~fD~~dg~gg~I~~~El~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~ 83 (95)
T 2wcb_A 10 HLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAI 83 (95)
T ss_dssp HHHHHHHHHHHHHTSSSSTTEEEHHHHHHHHHHHTHHHHHHCCCHHHHHHHHTTSSSSTTSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCCCccCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence 3567999999999 89998 9999999999986 4444 7889999999999999999999999998864
|
| >1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A | Back alignment and structure |
|---|
Probab=99.12 E-value=3.1e-11 Score=92.22 Aligned_cols=71 Identities=18% Similarity=0.203 Sum_probs=66.6
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHH---HHHHHHHhcCCCCCceehhhhHHHhh
Q 010013 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE---VRQLMEAADVDGNGTIDYIEFITATM 436 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~---~~~~~~~~d~~~~g~i~~~ef~~~~~ 436 (520)
..++++++.++.++|..+|.|++|+|+.+||..++..+|..++..+ +..+|..+|.|++|.|+| ||+.++.
T Consensus 6 ~~l~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~ 79 (86)
T 1j7q_A 6 RALGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLCS 79 (86)
T ss_dssp CCCSSTHHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHH
Confidence 4577888999999999999999999999999999999999999999 999999999999999999 9998764
|
| >1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.12 E-value=7.2e-11 Score=92.40 Aligned_cols=64 Identities=20% Similarity=0.265 Sum_probs=58.6
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.+.++.+|+.||+|++|+|+.+|++.++..++. +++++.+++..+|.|+||.|+|+||+.+|..
T Consensus 10 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~~l-~~~~l~~i~~~~D~d~dG~i~~~EF~~~~~~ 73 (99)
T 1qjt_A 10 NPVYEKYYRQVEAGNTGRVLALDAAAFLKKSGL-PDLILGKIWDLADTDGKGVLSKQEFFVALRL 73 (99)
T ss_dssp CTHHHHHHHHHCCTTSSCCCSHHHHHHHHTSSS-CHHHHHHHHHHHCCSSSSSCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCC-CHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH
Confidence 356899999999999999999999999998875 6788999999999999999999999999864
|
| >2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.12 E-value=8.8e-11 Score=85.94 Aligned_cols=65 Identities=32% Similarity=0.621 Sum_probs=61.0
Q ss_pred HhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhh
Q 010013 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (520)
Q Consensus 372 ~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 436 (520)
..++.++|+.+|.|++|+|+.+||..++..++..++.+++..+|..+|.|++|.|+|+||+.++.
T Consensus 5 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~ 69 (71)
T 2b1u_A 5 LEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLA 69 (71)
T ss_dssp HHHHHHHHTTSCCSSSSEEEHHHHHHHGGGTTCSSCHHHHHHHHHHCCSSSSSEEETTHHHHHHT
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 45689999999999999999999999999999999999999999999999999999999998764
|
| >2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.12 E-value=7.7e-11 Score=91.00 Aligned_cols=71 Identities=24% Similarity=0.445 Sum_probs=64.8
Q ss_pred HhhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhh
Q 010013 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (520)
Q Consensus 364 ~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 436 (520)
...++++++.++..+|+.+|.|++|+|+.+||..++..+| .+.++++.+|..+|.|++|.|+|+||+.++.
T Consensus 18 ~~~l~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~D~d~dg~I~~~EF~~~~~ 88 (91)
T 2pmy_A 18 GADGDGEELARLRSVFAACDANRSGRLEREEFRALCTELR--VRPADAEAVFQRLDADRDGAITFQEFARGFL 88 (91)
T ss_dssp -CHHHHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTT--CCHHHHHHHHHHHCTTCSSEECHHHHTHHHH
T ss_pred hccCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcC--cCHHHHHHHHHHhCCCCCCCEeHHHHHHHHH
Confidence 4567888999999999999999999999999999999988 6888999999999999999999999998764
|
| >1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=6.7e-11 Score=95.22 Aligned_cols=88 Identities=18% Similarity=0.222 Sum_probs=64.1
Q ss_pred HHHHhhHHHHhcccCC-CCCC-cccHHHHhhhhh-hcCCC-----CCHHHHHHHHHHhcCCCCCceehhhhHHHhhccch
Q 010013 369 EEEIMGLKEMFKSMDT-DNSG-TITFEELKAGLP-KLGTR-----LSESEVRQLMEAADVDGNGTIDYIEFITATMHMNR 440 (520)
Q Consensus 369 ~~~~~~l~~~F~~~D~-~~~g-~i~~~e~~~~l~-~~~~~-----~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~ 440 (520)
++++.++.++|+.||. |++| +|+.+||..++. .++.. .+..+++.+|..+|.|++|.|+|+||+.++....
T Consensus 8 ~~~~~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~~- 86 (113)
T 1xk4_C 8 ERNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMARLT- 86 (113)
T ss_dssp HHHHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHHHH-
Confidence 3557789999999995 9999 999999999998 67742 5788999999999999999999999999875432
Q ss_pred hhhHHHHHHHHhhhcCCCCCce
Q 010013 441 VEREEHLYKAFEYFDKDNSGYI 462 (520)
Q Consensus 441 ~~~~~~~~~~F~~~D~d~dG~I 462 (520)
......|...| +++|.=
T Consensus 87 ----~~~~~~f~~~~-~~~g~~ 103 (113)
T 1xk4_C 87 ----WASHEKMHEGD-EGPGHH 103 (113)
T ss_dssp ----HHHHC-------------
T ss_pred ----HHHHHHHhhCC-CCCccc
Confidence 34566788888 888853
|
| >1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.12 E-value=8.7e-11 Score=84.82 Aligned_cols=63 Identities=22% Similarity=0.505 Sum_probs=58.1
Q ss_pred hHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhh
Q 010013 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (520)
Q Consensus 374 ~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 436 (520)
++.++|+.+|.|++|.|+.+||..++..++...+.+++..+|..+|.|++|.|+|+||+.++.
T Consensus 2 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~ 64 (67)
T 1tiz_A 2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIE 64 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 578899999999999999999999999999889999999999999999999999999988764
|
| >2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A | Back alignment and structure |
|---|
Probab=99.11 E-value=9.8e-12 Score=99.58 Aligned_cols=95 Identities=16% Similarity=0.185 Sum_probs=79.5
Q ss_pred hHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc---chhhhHHHHHHH
Q 010013 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM---NRVEREEHLYKA 450 (520)
Q Consensus 374 ~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~---~~~~~~~~~~~~ 450 (520)
++.++|+.+| ++|.|+.+||..++... ....++++.+|..+|.|++|.|+.+||..++... ....+.+.+..+
T Consensus 10 e~~~l~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~ 85 (108)
T 2kyc_A 10 DIAAALRDCQ--APDSFSPKKFFQISGMS--KKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTF 85 (108)
T ss_dssp HHHHHHTTSC--STTTCCHHHHHHHHTCT--TCCSSSHHHHCSSSCSCCSSCCCGGGTTTSHHHHSSSCCCCCTTTTHHH
T ss_pred HHHHHHHHcC--CCCcCCHHHHHHHHhhC--cccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhccCCCCHHHHHHH
Confidence 4677888888 89999999999987532 2344678999999999999999999999887755 344566778999
Q ss_pred HhhhcCCCCCceeHHHHHHHHH
Q 010013 451 FEYFDKDNSGYITMEELEHALK 472 (520)
Q Consensus 451 F~~~D~d~dG~I~~~El~~~l~ 472 (520)
|+.+|.|++|.|+.+||..+++
T Consensus 86 ~~~~D~d~dg~i~~~eF~~~~~ 107 (108)
T 2kyc_A 86 LAAADHDGDGKIGAEEFQEMVQ 107 (108)
T ss_dssp HTTTCCSSSSCCCSSHHHHHHH
T ss_pred HHHhCCCCCCcCCHHHHHHHHh
Confidence 9999999999999999998875
|
| >2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A | Back alignment and structure |
|---|
Probab=99.11 E-value=8.3e-11 Score=93.81 Aligned_cols=70 Identities=21% Similarity=0.349 Sum_probs=62.6
Q ss_pred hHHHHhhHHHHhcccC-CCCCC-cccHHHHhhhhhh-----cCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhc
Q 010013 368 SEEEIMGLKEMFKSMD-TDNSG-TITFEELKAGLPK-----LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (520)
Q Consensus 368 ~~~~~~~l~~~F~~~D-~~~~g-~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 437 (520)
..+++.++.++|+.|| .|++| +|+.+||..++.. +|..+++++++.++..+|.|+||.|+|+||+.++..
T Consensus 17 ~~~~~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~ 93 (113)
T 2lnk_A 17 LEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC 93 (113)
T ss_dssp HHHHHHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 4567788999999999 89997 9999999999976 667788899999999999999999999999987753
|
| >1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.11 E-value=1.2e-10 Score=97.98 Aligned_cols=96 Identities=17% Similarity=0.126 Sum_probs=82.8
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC----CHHHHHH
Q 010013 409 SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG----DAKTIKE 484 (520)
Q Consensus 409 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~----~~~~~~~ 484 (520)
++++.+|..+|.|++|.|+.+||..++.......+...+..+|+ +++|.|+.+||..++...... ..+.+..
T Consensus 5 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~ 80 (140)
T 1ggw_A 5 SPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIES----TLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVK 80 (140)
T ss_dssp TTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHHHHT----TSCSSEEHHHHHHHHCTTSSSSSSCCHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHh----CCCCcCcHHHHHHHHHHHhcccCcccHHHHHH
Confidence 45788999999999999999999998877665666777887777 899999999999999765432 3478999
Q ss_pred HHHHhcCCCCcceeHHHHHHHHHc
Q 010013 485 IIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 485 ~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
+|..+|.|++|.|+.+||..++..
T Consensus 81 ~F~~~D~d~~G~i~~~el~~~l~~ 104 (140)
T 1ggw_A 81 GFQVFDKDATGMIGVGELRYVLTS 104 (140)
T ss_dssp HHHTTCSSCSSCCCHHHHHHHHHH
T ss_pred HHHHhCCCCCCcEeHHHHHHHHHH
Confidence 999999999999999999999875
|
| >2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.11 E-value=2.5e-10 Score=91.47 Aligned_cols=64 Identities=27% Similarity=0.319 Sum_probs=57.6
Q ss_pred hHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 443 REEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 443 ~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..+.++.+|+.||+|++|+|+.+||+.++. +.. +.+++..+|..+|.|+||.|+|+||+.+|..
T Consensus 12 ~~~~l~~~F~~~D~d~dG~I~~~El~~~l~--~~~~~~~~~~~i~~~~D~d~dG~I~~~EF~~~~~~ 76 (111)
T 2kgr_A 12 SRLKYRQLFNSHDKTMSGHLTGPQARTILM--QSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMHL 76 (111)
T ss_dssp HHHHHHHHHHTTSCSSCCEEEHHHHHHHHH--TTCCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCcCcHHHHHHHHH--hCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH
Confidence 456789999999999999999999999998 334 7788999999999999999999999998854
|
| >3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A | Back alignment and structure |
|---|
Probab=99.11 E-value=1.8e-10 Score=90.06 Aligned_cols=66 Identities=20% Similarity=0.324 Sum_probs=56.8
Q ss_pred hHHHHHHHHhhhcCCC---CCceeHHHHHHHHHhcC-CC-----CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 443 REEHLYKAFEYFDKDN---SGYITMEELEHALKKYN-MG-----DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 443 ~~~~~~~~F~~~D~d~---dG~I~~~El~~~l~~~~-~~-----~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..+.++.+|+.||.++ +|+|+.+||+.+|...+ .. ++++++++|+.+|.|+||.|+|+||+.+|..
T Consensus 9 ~i~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~ 83 (100)
T 3nxa_A 9 AVIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGG 83 (100)
T ss_dssp HHHHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 4567999999999964 79999999999998643 22 2678999999999999999999999999875
|
| >2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A | Back alignment and structure |
|---|
Probab=99.11 E-value=1e-10 Score=92.41 Aligned_cols=66 Identities=14% Similarity=0.364 Sum_probs=57.5
Q ss_pred hHHHHHHHHhhhc-CCCC-CceeHHHHHHHHHh-cCCC--CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 443 REEHLYKAFEYFD-KDNS-GYITMEELEHALKK-YNMG--DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 443 ~~~~~~~~F~~~D-~d~d-G~I~~~El~~~l~~-~~~~--~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..+.++.+|+.|| .|++ |+|+.+||+.++.. +|.. ++++++++|..+|.|+||.|+|+||+.+|..
T Consensus 20 ~~~~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~~~~~~~ev~~li~~~D~d~dG~Idf~EF~~~~~~ 90 (106)
T 2h2k_A 20 SIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGE 90 (106)
T ss_dssp HHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCTTTTTTCCCHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcCcCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH
Confidence 3567999999999 7987 79999999999986 6643 3467999999999999999999999999865
|
| >2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A | Back alignment and structure |
|---|
Probab=99.11 E-value=1.3e-10 Score=104.92 Aligned_cols=101 Identities=15% Similarity=0.228 Sum_probs=83.2
Q ss_pred HHHhcccCCCCCCcccHHHHhhhhhhcCCC----------------CCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc-
Q 010013 376 KEMFKSMDTDNSGTITFEELKAGLPKLGTR----------------LSESEVRQLMEAADVDGNGTIDYIEFITATMHM- 438 (520)
Q Consensus 376 ~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~----------------~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~- 438 (520)
.++|..+|.+++|.|+.+||..++...... ...+.+..+|..+|.|++|.|+.+||..++...
T Consensus 64 ~~l~~~~d~~~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~ 143 (208)
T 2ct9_A 64 DRIINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMV 143 (208)
T ss_dssp HHHHHTTSCTTCSCEEHHHHHHHHHTTSCCC-----------CCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHS
T ss_pred HHHHHHHcCCCCCcCcHHHHHHHHHhhccccchhhhcccccccccccHHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHHh
Confidence 357888999999999999999988765321 145779999999999999999999999988754
Q ss_pred chhhhHHHHHHH----HhhhcCCCCCceeHHHHHHHHHhcCC
Q 010013 439 NRVEREEHLYKA----FEYFDKDNSGYITMEELEHALKKYNM 476 (520)
Q Consensus 439 ~~~~~~~~~~~~----F~~~D~d~dG~I~~~El~~~l~~~~~ 476 (520)
....+.+.+..+ |+.+|.|+||.|+.+||..++...+.
T Consensus 144 g~~~s~~~~~~l~~~~~~~~D~d~dG~Is~~EF~~~~~~~~~ 185 (208)
T 2ct9_A 144 GVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLEKVDV 185 (208)
T ss_dssp CTTCCHHHHHHHHHHHHHHHCSSSSSSEEHHHHHHTTTTSCG
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhccCh
Confidence 444556666665 99999999999999999999876554
|
| >3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi} | Back alignment and structure |
|---|
Probab=99.11 E-value=8.4e-12 Score=113.89 Aligned_cols=126 Identities=17% Similarity=0.211 Sum_probs=89.4
Q ss_pred CCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhc-cchhhhH----HHHHHHHhhh---
Q 010013 383 DTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH-MNRVERE----EHLYKAFEYF--- 454 (520)
Q Consensus 383 D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~-~~~~~~~----~~~~~~F~~~--- 454 (520)
++++++.++.+++...+..........++..+|..+|.|++|.|+++||..++.. .....+. ..+..+|+.+
T Consensus 22 ~~~~~~~~~~~~l~~~~~~~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~ 101 (219)
T 3cs1_A 22 KKAKDRKEAWERIRQAIPREKTAEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTL 101 (219)
T ss_dssp CCHHHHHHHHHHHHHHSCCSSSHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCGGGTCSCHHHHHHHHHHHHHHH
T ss_pred hhHHhHHHHHHHHHHHhcccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhh
Confidence 4445677777777766543211112345788999999999999999999987654 3333322 2333444433
Q ss_pred --cCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 455 --DKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 455 --D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
|.|++|.|+..||..++..+... ..+.+..+|..+|.|++|.|+.+||..++..
T Consensus 102 ~~~~d~~g~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~ 158 (219)
T 3cs1_A 102 GSKLENKGSEDFVEFLEFRLMLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPK 158 (219)
T ss_dssp HHHHHTSCCCSSBCHHHHHHHHHHHHHHHHHHHHHHTTCSSSSSEEEHHHHHHHHHH
T ss_pred hhccCCCCcCCHHHHHHHHHHHhccchHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 34899999999999887544322 4567999999999999999999999999864
|
| >2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A | Back alignment and structure |
|---|
Probab=99.10 E-value=1.2e-10 Score=105.74 Aligned_cols=98 Identities=15% Similarity=0.268 Sum_probs=80.1
Q ss_pred HHHhcccCCCCCCc-ccHHHHhhhhhhcCCCC-CHHHHHHHHHHhcCCCCCceehhhhHHHhhccch-----hhhHH---
Q 010013 376 KEMFKSMDTDNSGT-ITFEELKAGLPKLGTRL-SESEVRQLMEAADVDGNGTIDYIEFITATMHMNR-----VEREE--- 445 (520)
Q Consensus 376 ~~~F~~~D~~~~g~-i~~~e~~~~l~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~-----~~~~~--- 445 (520)
.++|..+|.|++|. |+.+||..++..+.... ..+.+..+|..+|.|++|.|+.+||..++..... ..+.+
T Consensus 94 ~~lf~~~D~d~dG~~I~f~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~ 173 (214)
T 2l4h_A 94 ERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMK 173 (214)
T ss_dssp HHHHHHHCCSSSCCSEEHHHHHHHHHHTSSCSCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHH
T ss_pred HHHHHHhCcCCCCCEecHHHHHHHHHHHcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHH
Confidence 35788889999999 99999999988765443 3568999999999999999999999988764432 22223
Q ss_pred -HHHHHHhhhcCCCCCceeHHHHHHHHHh
Q 010013 446 -HLYKAFEYFDKDNSGYITMEELEHALKK 473 (520)
Q Consensus 446 -~~~~~F~~~D~d~dG~I~~~El~~~l~~ 473 (520)
.+..+|+.+|.|+||.|+++||..++..
T Consensus 174 ~~~~~~~~~~D~d~dG~Is~~EF~~~~~~ 202 (214)
T 2l4h_A 174 QLIDNILEESDIDRDGTINLSEFQHVISR 202 (214)
T ss_dssp HHHHHHHHHHCCSCCSSBCSHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 3446999999999999999999998864
|
| >2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.09 E-value=3e-10 Score=90.67 Aligned_cols=68 Identities=24% Similarity=0.381 Sum_probs=62.8
Q ss_pred hhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHcC
Q 010013 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRKG 509 (520)
Q Consensus 442 ~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~~ 509 (520)
.....++.+|+.||.|++|+|+.+||..++..+|.. +.+++..+|..+|.|+||.|+|+||+.++...
T Consensus 29 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~i~~~eF~~~~~~~ 97 (107)
T 2d58_A 29 SKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGK 97 (107)
T ss_dssp HHHHHHHHHHTTSCCCTTSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHc
Confidence 345678999999999999999999999999999987 88999999999999999999999999998763
|
| >2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei} | Back alignment and structure |
|---|
Probab=99.09 E-value=3.1e-11 Score=110.61 Aligned_cols=100 Identities=17% Similarity=0.195 Sum_probs=77.1
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHh-hccchhhh----HHHHHHHHhhh-----cCCCCCceeHHHHHHHHHhcCCC-
Q 010013 409 SEVRQLMEAADVDGNGTIDYIEFITAT-MHMNRVER----EEHLYKAFEYF-----DKDNSGYITMEELEHALKKYNMG- 477 (520)
Q Consensus 409 ~~~~~~~~~~d~~~~g~i~~~ef~~~~-~~~~~~~~----~~~~~~~F~~~-----D~d~dG~I~~~El~~~l~~~~~~- 477 (520)
.+++.+|..+|.|++|.|+++||..++ .......+ ...+..+|..+ |.|++|.|+++||..++......
T Consensus 51 ~~l~~~F~~~D~d~dG~Is~~El~~~l~~~lg~~~~~~~~~~~~~~~f~~~~~~~~D~d~~G~I~~~EF~~~~~~~~~~~ 130 (226)
T 2lvv_A 51 SRRIELFKQFDTNGTGKLGFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNKVKGVGEEDLVEFLEFRLMLCYIY 130 (226)
T ss_dssp HHHHHHHHHHGGGSCSCBCSHHHHHHHHHTTCCTTTSSSCHHHHHHHHHHHHHHHHHHSCCCCCSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcccCCCCCCCCcCCHHHHHHHHHHHHhcc
Confidence 457889999999999999999999844 33222222 33455555555 99999999999999864332222
Q ss_pred CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 478 DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 478 ~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..+.+..+|..+|.|++|.|+.+||..++..
T Consensus 131 ~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~ 161 (226)
T 2lvv_A 131 DIFELTVMFDTMDKDGSLLLELQEFKEALPK 161 (226)
T ss_dssp HHHHHHHHHHHHSCSSCCEECHHHHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCCCeEcHHHHHHHHHH
Confidence 3457999999999999999999999999974
|
| >2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.6e-10 Score=92.55 Aligned_cols=68 Identities=22% Similarity=0.376 Sum_probs=62.3
Q ss_pred hhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhh
Q 010013 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (520)
Q Consensus 367 ~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 436 (520)
+++++..++.++|+.||.|++|+|+.+||..++. +..++.+++..+|..+|.|++|.|+|+||+.++.
T Consensus 8 ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~--~~~~~~~~~~~i~~~~D~d~dG~I~~~EF~~~~~ 75 (111)
T 2kgr_A 8 VPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILM--QSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMH 75 (111)
T ss_dssp SCHHHHHHHHHHHHTTSCSSCCEEEHHHHHHHHH--TTCCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH--hCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHH
Confidence 5677888999999999999999999999999998 5668899999999999999999999999998764
|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A | Back alignment and structure |
|---|
Probab=99.08 E-value=2.2e-10 Score=100.16 Aligned_cols=98 Identities=13% Similarity=0.225 Sum_probs=80.5
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHhhccc----hhhhHHH-H--------HHHHhhhcCCCCCceeHHHHHHHHHhcC
Q 010013 409 SEVRQLMEAADVDGNGTIDYIEFITATMHMN----RVEREEH-L--------YKAFEYFDKDNSGYITMEELEHALKKYN 475 (520)
Q Consensus 409 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~----~~~~~~~-~--------~~~F~~~D~d~dG~I~~~El~~~l~~~~ 475 (520)
.+++.+|..+|.|++|.|+.+||..++.... ...+... + ..+|+.+| ++|.|+.+||..++....
T Consensus 6 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~D--~~g~i~~~EF~~~~~~~~ 83 (174)
T 1q80_A 6 QKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFINSMKEMV 83 (174)
T ss_dssp HHHHHHHHHHCTTCSSEESHHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCCCCcEeHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHhcC--CCCeEcHHHHHHHHHHHc
Confidence 4688999999999999999999999876544 3333333 3 46789999 999999999999987754
Q ss_pred CC------CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 476 MG------DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 476 ~~------~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.. ..+.+..+|..+|.|++|.|+.+||..++..
T Consensus 84 ~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~ 122 (174)
T 1q80_A 84 KNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGM 122 (174)
T ss_dssp TSTTCHHHHHTHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Confidence 32 2356899999999999999999999999865
|
| >2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A | Back alignment and structure |
|---|
Probab=99.08 E-value=2e-10 Score=88.79 Aligned_cols=66 Identities=17% Similarity=0.413 Sum_probs=58.1
Q ss_pred hHHHHHHHHhhhc-CCCCC-ceeHHHHHHHHHh---cCCCCHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 443 REEHLYKAFEYFD-KDNSG-YITMEELEHALKK---YNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 443 ~~~~~~~~F~~~D-~d~dG-~I~~~El~~~l~~---~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
....++.+|+.|| +|++| +|+.+||+.+++. ++..++.+++++|..+|.|+||.|+|+||+.++..
T Consensus 8 ~~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~~~~~~~~~~i~~~~~~~D~d~dG~I~f~EF~~~~~~ 78 (92)
T 2kax_A 8 ALTTMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGEMKESSIDDLMKSLDKNSDQEIDFKEYSVFLTM 78 (92)
T ss_dssp HHHHHHHHHHHHHTTSSCSSEEEHHHHHHHHHHHSCCTTTCCTTHHHHHHHHTTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCCCeeCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 3467899999999 99999 9999999999986 33345677999999999999999999999999875
|
| >1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... | Back alignment and structure |
|---|
Probab=99.08 E-value=5.4e-10 Score=95.77 Aligned_cols=96 Identities=15% Similarity=0.279 Sum_probs=82.4
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhc-CCC-CHHHHHHHH
Q 010013 409 SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY-NMG-DAKTIKEII 486 (520)
Q Consensus 409 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~-~~~-~~~~~~~~~ 486 (520)
.+++.+|..+|.|++|.|+.+||..++.......+...+..+|+ +++|.|+.+||..++... ... ..+.+..+|
T Consensus 18 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F 93 (156)
T 1wdc_B 18 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLSGTDSEETIRNAF 93 (156)
T ss_dssp HHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTCSCCCHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHH----hCCCcCcHHHHHHHHHHHhcCCChHHHHHHHH
Confidence 45789999999999999999999998877665666777777775 579999999999998754 222 678899999
Q ss_pred HHhcCCCCcceeHHHHHHHHHc
Q 010013 487 AEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 487 ~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..+|.|++|.|+.+||..++..
T Consensus 94 ~~~D~d~~G~I~~~el~~~l~~ 115 (156)
T 1wdc_B 94 AMFDEQETKKLNIEYIKDLLEN 115 (156)
T ss_dssp HTTCTTCCSCEEHHHHHHHHHH
T ss_pred HHHCcCCCCccCHHHHHHHHHH
Confidence 9999999999999999999986
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 520 | ||||
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 1e-95 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 8e-88 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 9e-88 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 6e-86 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 9e-86 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 6e-84 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 2e-82 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 4e-82 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 2e-81 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 4e-80 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 5e-80 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 2e-79 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 5e-79 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 4e-76 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 1e-75 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 2e-72 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 1e-71 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 4e-71 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 5e-71 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 4e-70 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 1e-69 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 4e-68 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 2e-66 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 9e-66 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 2e-65 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 2e-64 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 1e-63 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 2e-63 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 3e-63 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 4e-63 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 3e-62 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 1e-61 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 1e-60 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 1e-60 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 9e-60 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 2e-59 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 2e-59 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 1e-58 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 3e-58 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 4e-58 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 5e-58 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 1e-57 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 1e-56 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 5e-56 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 1e-55 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 2e-55 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 5e-55 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 1e-54 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 2e-54 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 1e-53 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 1e-53 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 3e-53 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 9e-53 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 1e-52 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 8e-52 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 3e-50 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 2e-47 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 2e-47 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 1e-46 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 2e-44 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 7e-42 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 1e-40 | |
| d1bjfa_ | 181 | a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId | 5e-33 | |
| d1lkja_ | 146 | a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom | 8e-33 | |
| d1exra_ | 146 | a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetr | 2e-32 | |
| d1g8ia_ | 187 | a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1 | 2e-30 | |
| d1topa_ | 162 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 6e-30 | |
| d1jbaa_ | 189 | a.39.1.5 (A:) Guanylate cyclase activating protein | 6e-30 | |
| d1dtla_ | 156 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 9e-30 | |
| d1s6ia_ | 182 | a.39.1.5 (A:) Calcium-dependent protein kinase sk5 | 2e-29 | |
| d2obha1 | 141 | a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapien | 1e-28 | |
| d1fpwa_ | 190 | a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1 | 8e-28 | |
| d1qxpa2 | 188 | a.39.1.8 (A:515-702) Calpain large subunit, C-term | 3e-27 | |
| d1qxpa2 | 188 | a.39.1.8 (A:515-702) Calpain large subunit, C-term | 2e-15 | |
| d1qxpa2 | 188 | a.39.1.8 (A:515-702) Calpain large subunit, C-term | 3e-06 | |
| d1pvaa_ | 109 | a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax | 4e-26 | |
| d1pvaa_ | 109 | a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax | 4e-13 | |
| d2zfda1 | 183 | a.39.1.5 (A:32-214) Calcineurin B-like protein 2 { | 1e-25 | |
| d2zfda1 | 183 | a.39.1.5 (A:32-214) Calcineurin B-like protein 2 { | 5e-08 | |
| d1df0a1 | 186 | a.39.1.8 (A:515-700) Calpain large subunit, C-term | 3e-25 | |
| d1df0a1 | 186 | a.39.1.8 (A:515-700) Calpain large subunit, C-term | 8e-13 | |
| d1df0a1 | 186 | a.39.1.8 (A:515-700) Calpain large subunit, C-term | 2e-07 | |
| d1df0a1 | 186 | a.39.1.8 (A:515-700) Calpain large subunit, C-term | 0.003 | |
| d1s6ca_ | 178 | a.39.1.5 (A:) Kchip1, Kv4 potassium channel-intera | 5e-25 | |
| d2scpa_ | 174 | a.39.1.5 (A:) Sarcoplasmic calcium-binding protein | 2e-24 | |
| d5pala_ | 109 | a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis | 2e-24 | |
| d5pala_ | 109 | a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis | 2e-12 | |
| d2pvba_ | 107 | a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax | 3e-24 | |
| d2pvba_ | 107 | a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax | 6e-12 | |
| d1nyaa_ | 176 | a.39.1.5 (A:) Calerythrin {Saccharopolyspora eryth | 1e-23 | |
| d1nyaa_ | 176 | a.39.1.5 (A:) Calerythrin {Saccharopolyspora eryth | 2e-07 | |
| d1uhka1 | 187 | a.39.1.5 (A:3-189) Calcium-regulated photoprotein | 2e-23 | |
| d1uhka1 | 187 | a.39.1.5 (A:3-189) Calcium-regulated photoprotein | 3e-09 | |
| d1uhka1 | 187 | a.39.1.5 (A:3-189) Calcium-regulated photoprotein | 2e-06 | |
| d1w7jb1 | 139 | a.39.1.5 (B:11-149) Myosin Essential Chain {Human | 2e-23 | |
| d1w7jb1 | 139 | a.39.1.5 (B:11-149) Myosin Essential Chain {Human | 2e-09 | |
| d1s6ja_ | 87 | a.39.1.5 (A:) Calcium-dependent protein kinase sk5 | 3e-23 | |
| d1s6ja_ | 87 | a.39.1.5 (A:) Calcium-dependent protein kinase sk5 | 4e-15 | |
| d1s6ja_ | 87 | a.39.1.5 (A:) Calcium-dependent protein kinase sk5 | 2e-08 | |
| d1rroa_ | 108 | a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) | 1e-22 | |
| d1rroa_ | 108 | a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) | 7e-14 | |
| d1xo5a_ | 180 | a.39.1.5 (A:) Calcium- and integrin-binding protei | 2e-22 | |
| d2sasa_ | 185 | a.39.1.5 (A:) Sarcoplasmic calcium-binding protein | 2e-22 | |
| d2sasa_ | 185 | a.39.1.5 (A:) Sarcoplasmic calcium-binding protein | 3e-06 | |
| d1omra_ | 201 | a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: | 2e-22 | |
| d1rwya_ | 109 | a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [Ta | 2e-22 | |
| d1rwya_ | 109 | a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [Ta | 3e-12 | |
| d1qv0a_ | 189 | a.39.1.5 (A:) Calcium-regulated photoprotein {Hydr | 4e-22 | |
| d1qv0a_ | 189 | a.39.1.5 (A:) Calcium-regulated photoprotein {Hydr | 2e-08 | |
| d1k94a_ | 165 | a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta | 1e-21 | |
| d1k94a_ | 165 | a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta | 9e-15 | |
| d1k94a_ | 165 | a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta | 2e-11 | |
| d1k94a_ | 165 | a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta | 2e-07 | |
| d1k94a_ | 165 | a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta | 1e-04 | |
| d1juoa_ | 172 | a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: | 3e-21 | |
| d1juoa_ | 172 | a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: | 3e-11 | |
| d1juoa_ | 172 | a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: | 3e-07 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 6e-21 | |
| d1wdcb_ | 142 | a.39.1.5 (B:) Myosin Essential Chain {Bay scallop | 9e-20 | |
| d1auib_ | 165 | a.39.1.5 (B:) Calcineurin regulatory subunit (B-ch | 2e-19 | |
| d1wdcc_ | 152 | a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop | 4e-19 | |
| d1wdcc_ | 152 | a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop | 0.004 | |
| d1alva_ | 173 | a.39.1.8 (A:) Calpain small (regulatory) subunit ( | 4e-19 | |
| d1alva_ | 173 | a.39.1.8 (A:) Calpain small (regulatory) subunit ( | 6e-13 | |
| d1oqpa_ | 77 | a.39.1.5 (A:) Caltractin (centrin 2) {Green algae | 9e-19 | |
| d1oqpa_ | 77 | a.39.1.5 (A:) Caltractin (centrin 2) {Green algae | 2e-14 | |
| d1oqpa_ | 77 | a.39.1.5 (A:) Caltractin (centrin 2) {Green algae | 2e-09 | |
| d1c7va_ | 68 | a.39.1.5 (A:) Calcium vector protein {Amphioxus (B | 2e-18 | |
| d1c7va_ | 68 | a.39.1.5 (A:) Calcium vector protein {Amphioxus (B | 2e-15 | |
| d1m45a_ | 146 | a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's ye | 3e-18 | |
| d1m45a_ | 146 | a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's ye | 1e-04 | |
| d1jfja_ | 134 | a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histoly | 4e-18 | |
| d1jfja_ | 134 | a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histoly | 0.002 | |
| d1f54a_ | 77 | a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom | 8e-18 | |
| d1f54a_ | 77 | a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom | 1e-13 | |
| d2opoa1 | 81 | a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Che | 2e-17 | |
| d2opoa1 | 81 | a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Che | 5e-17 | |
| d2opoa1 | 81 | a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Che | 5e-08 | |
| d1ij5a_ | 321 | a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind | 2e-17 | |
| d1ij5a_ | 321 | a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind | 2e-14 | |
| d1ij5a_ | 321 | a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind | 7e-10 | |
| d1ij5a_ | 321 | a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind | 0.003 | |
| d1jc2a_ | 75 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 5e-17 | |
| d1jc2a_ | 75 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 4e-13 | |
| d1jc2a_ | 75 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 2e-07 | |
| d1ggwa_ | 140 | a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharo | 9e-17 | |
| d1yuta1 | 98 | a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sa | 1e-16 | |
| d1yuta1 | 98 | a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sa | 4e-10 | |
| d2zkmx1 | 170 | a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human | 2e-16 | |
| d1fi5a_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), | 3e-16 | |
| d1fi5a_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), | 2e-13 | |
| d1fi5a_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), | 1e-07 | |
| d1tiza_ | 67 | a.39.1.5 (A:) Calmodulin-related protein T21P5.17 | 4e-16 | |
| d1tiza_ | 67 | a.39.1.5 (A:) Calmodulin-related protein T21P5.17 | 3e-13 | |
| d1tiza_ | 67 | a.39.1.5 (A:) Calmodulin-related protein T21P5.17 | 8e-10 | |
| d1cb1a_ | 78 | a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [Tax | 1e-15 | |
| d1cb1a_ | 78 | a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [Tax | 2e-12 | |
| d2pq3a1 | 73 | a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [T | 1e-15 | |
| d2pq3a1 | 73 | a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [T | 4e-13 | |
| d1avsa_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 1e-15 | |
| d1avsa_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 4e-15 | |
| d1wrka1 | 82 | a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens) | 2e-15 | |
| d1wrka1 | 82 | a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens) | 1e-13 | |
| d1fw4a_ | 65 | a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: | 7e-15 | |
| d1fw4a_ | 65 | a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: | 2e-13 | |
| d1fw4a_ | 65 | a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: | 5e-06 | |
| d1qx2a_ | 76 | a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [Tax | 8e-15 | |
| d1qx2a_ | 76 | a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [Tax | 5e-11 | |
| d1xk4a1 | 87 | a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sa | 3e-14 | |
| d1xk4a1 | 87 | a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sa | 7e-08 | |
| d3c1va1 | 93 | a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sa | 1e-13 | |
| d3c1va1 | 93 | a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sa | 1e-11 | |
| d1hqva_ | 181 | a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mous | 2e-13 | |
| d1hqva_ | 181 | a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mous | 2e-07 | |
| d1hqva_ | 181 | a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mous | 2e-04 | |
| d1qjta_ | 99 | a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: | 7e-13 | |
| d1qjta_ | 99 | a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: | 4e-07 | |
| d1a4pa_ | 92 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 1e-12 | |
| d1a4pa_ | 92 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 6e-10 | |
| d2fcea1 | 61 | a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [ | 2e-12 | |
| d2fcea1 | 61 | a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [ | 5e-12 | |
| d2fcea1 | 61 | a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [ | 3e-05 | |
| d1snla_ | 99 | a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo | 2e-12 | |
| d1snla_ | 99 | a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo | 4e-11 | |
| d1wlza1 | 83 | a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {H | 1e-11 | |
| d1wlza1 | 83 | a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {H | 5e-11 | |
| d1wlza1 | 83 | a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {H | 0.004 | |
| d2jxca1 | 95 | a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [ | 2e-11 | |
| d2jxca1 | 95 | a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [ | 9e-08 | |
| d1zfsa1 | 93 | a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus no | 2e-11 | |
| d1zfsa1 | 93 | a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus no | 2e-10 | |
| d1ksoa_ | 93 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 5e-11 | |
| d1ksoa_ | 93 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 6e-09 | |
| d1k8ua_ | 89 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 9e-11 | |
| d1k8ua_ | 89 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 3e-06 | |
| d1c07a_ | 95 | a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: | 1e-10 | |
| d1c07a_ | 95 | a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: | 2e-10 | |
| d1c07a_ | 95 | a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: | 0.003 | |
| d1y1xa_ | 182 | a.39.1.8 (A:) Programmed cell death 6 protein-like | 1e-10 | |
| d1y1xa_ | 182 | a.39.1.8 (A:) Programmed cell death 6 protein-like | 3e-06 | |
| d1fi6a_ | 92 | a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: | 2e-10 | |
| d1fi6a_ | 92 | a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: | 1e-09 | |
| d1e8aa_ | 87 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 4e-10 | |
| d1e8aa_ | 87 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 2e-06 | |
| d1psra_ | 100 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 2e-09 | |
| d1psra_ | 100 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 4e-09 | |
| d1iq3a_ | 110 | a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9 | 1e-07 | |
| d1iq3a_ | 110 | a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9 | 3e-07 | |
| d2hf5a1 | 33 | a.39.1.5 (A:81-113) Troponin C {Human (Homo sapien | 9e-07 | |
| d2hf5a1 | 33 | a.39.1.5 (A:81-113) Troponin C {Human (Homo sapien | 1e-04 | |
| d3cr5x1 | 90 | a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos tauru | 3e-05 | |
| d3cr5x1 | 90 | a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos tauru | 1e-04 | |
| d2pula1 | 392 | d.144.1.6 (A:5-396) Methylthioribose kinase MtnK { | 5e-05 | |
| d1qlsa_ | 95 | a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), | 1e-04 | |
| d1qlsa_ | 95 | a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), | 2e-04 | |
| d1j55a_ | 94 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 2e-04 | |
| d1j55a_ | 94 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 5e-04 | |
| d1xk4c1 | 83 | a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sa | 4e-04 |
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 290 bits (743), Expect = 1e-95
Identities = 123/299 (41%), Positives = 172/299 (57%), Gaps = 5/299 (1%)
Query: 60 KPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQ 119
K ED+R+ Y F LG G F L K T++ A K I+ + L + E+
Sbjct: 2 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKAL--EGKEGSMENEIA 59
Query: 120 IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVT 179
++H + H NIV L YE + LIM L +GGELFDRI+ KG Y+ER A+ L Q++
Sbjct: 60 VLHKIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 118
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAP 239
V Y H +G++HRDLKPEN L+ S EDS + +DFGLS PG V G+ YVAP
Sbjct: 119 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 178
Query: 240 EVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298
EVL + Y D WS GVI YILL G PPF+ E + +F+ IL+ +F S W +IS
Sbjct: 179 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD 238
Query: 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKK 357
SAKD ++ ++ DP++R + + L HPW+ D A DK + +V ++K+ A +K K+
Sbjct: 239 SAKDFIRHLMEKDPEKRFTCEQALQHPWIAGD-TALDKNIHQSVSEQIKKNFAKSKWKQ 296
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 271 bits (693), Expect = 8e-88
Identities = 86/305 (28%), Positives = 156/305 (51%), Gaps = 12/305 (3%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
+++ Y+ +LGRG+FG+ + +K+ + K + + D V++E+ I++
Sbjct: 1 KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVK----VKGTDQVLVKKEISILN 56
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVV 181
HRNI+ L ++E + +I + +G ++F+RI +ER + Q+ +
Sbjct: 57 IA-RHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEAL 115
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV 241
+ HS + H D++PEN ++ + S +K +FG + KPGD F+ L + Y APEV
Sbjct: 116 QFLHSHNIGHFDIRPENIIYQTR-RSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEV 174
Query: 242 LRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300
+ + D+WS G ++Y+LLSG+ PF ET Q I + I+ F + + IS A
Sbjct: 175 HQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEA 234
Query: 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVAL 360
D V ++L + K R++A+E L HPW++ + + V+ +K R + L K L
Sbjct: 235 MDFVDRLLVKERKSRMTASEALQHPWLKQKIE----RVSTKVIRTLKHRRYYHTLIKKDL 290
Query: 361 KVIAE 365
++
Sbjct: 291 NMVVS 295
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 271 bits (695), Expect = 9e-88
Identities = 97/331 (29%), Positives = 164/331 (49%), Gaps = 28/331 (8%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
V + Y ELG G FGV + K T + F K I++ +++ V+ E+ IM+
Sbjct: 26 SVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDK---YTVKNEISIMNQ 82
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH-YSERAAANLCRQMVTVVH 182
L H ++ L A+ED++ + LI++ +GGELFDRI A+ + SE N RQ +
Sbjct: 83 LH-HPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLK 141
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL 242
+ H ++H D+KPEN + + + S +K DFGL+ P ++ K +A + APE++
Sbjct: 142 HMHEHSIVHLDIKPENIMCETK-KASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIV 200
Query: 243 RRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
R G D+W+ GV+ Y+LLSG+ PF GE + + R +F D + ++S AK
Sbjct: 201 DREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAK 260
Query: 302 DIVKKMLHADPKERLSAAEVLNHPWMRVDGD---------------------ASDKPLDI 340
D +K +L +P++RL+ + L HPW++ D +D P
Sbjct: 261 DFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSRYNKIRQKIKEKYADWPAPQ 320
Query: 341 AVLTRMKQFRAMNKLKKVALKVIAENLSEEE 371
+ R+ F ++ K + ++ +E
Sbjct: 321 PAIGRIANFSSLRKHRPQEYQIYDSYFDRKE 351
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 264 bits (676), Expect = 6e-86
Identities = 95/273 (34%), Positives = 143/273 (52%), Gaps = 16/273 (5%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN------RDDVEDVRREVQIMH 122
Y LGRG V HK T +++A K I + ++ E +EV I+
Sbjct: 5 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 64
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVH 182
++GH NI++LK YE L+ DL GELFD + K SE+ + R ++ V+
Sbjct: 65 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 124
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL 242
H + ++HRDLKPEN L +D +K TDFG S PG+ +++ G+ Y+APE++
Sbjct: 125 ALHKLNIVHRDLKPENILLD---DDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEII 181
Query: 243 -------RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295
YG E D+WS GVI+Y LL+G PPFW + + I+ G+ F S W +
Sbjct: 182 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDD 241
Query: 296 ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
S + KD+V + L P++R +A E L HP+ +
Sbjct: 242 YSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 274
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 266 bits (681), Expect = 9e-86
Identities = 100/297 (33%), Positives = 150/297 (50%), Gaps = 9/297 (3%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
+ V + Y ELG G FGV + VT + T FA K + + + D E VR+E+Q M
Sbjct: 22 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP---HESDKETVRKEIQTMS 78
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVV 181
L H +V L A+ED + + +I + +GGELF+++ + SE A RQ+ +
Sbjct: 79 VLR-HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGL 137
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV 241
+ H +H DLKPEN +F++ + LK DFGL+ P K G+A + APEV
Sbjct: 138 CHMHENNYVHLDLKPENIMFTTK-RSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEV 196
Query: 242 LR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300
+ G D+WS GV+ YILLSG+ PF GE + + + + IS
Sbjct: 197 AEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDG 256
Query: 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKK 357
KD ++K+L ADP R++ + L HPW+ G+A + I +R + R K K
Sbjct: 257 KDFIRKLLLADPNTRMTIHQALEHPWLT-PGNAPGRDSQIPS-SRYTKIRDSIKTKY 311
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 258 bits (661), Expect = 6e-84
Identities = 91/274 (33%), Positives = 135/274 (49%), Gaps = 16/274 (5%)
Query: 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIM 121
+ED + GR LG+G+FG YL K +K A K + +L +RREV+I
Sbjct: 5 LED----FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 60
Query: 122 HHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVV 181
HL H NI+ L G + D V LI++ G ++ + + E+ A ++ +
Sbjct: 61 SHL-RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 119
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV 241
YCHS V+HRD+KPEN L S LK DFG SV P L G+ Y+ PE+
Sbjct: 120 SYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSVHA-PSSRRTTLCGTLDYLPPEM 175
Query: 242 LR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300
+ R + + D+WS GV+ Y L G PPF T Q + I R F ++ A
Sbjct: 176 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF----PDFVTEGA 231
Query: 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVDGDAS 334
+D++ ++L +P +R EVL HPW+ ++S
Sbjct: 232 RDLISRLLKHNPSQRPMLREVLEHPWIT--ANSS 263
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 257 bits (657), Expect = 2e-82
Identities = 91/315 (28%), Positives = 156/315 (49%), Gaps = 19/315 (6%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ + LG G G + +K T+++FA K + D RREV++ +
Sbjct: 14 KVTSQVLGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCP 65
Query: 129 NIVELKGAYEDRHSVN----LIMDLCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVH 182
+IV + YE+ ++ ++M+ GGELF RI +G ++ER A+ + + + +
Sbjct: 66 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 125
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL 242
Y HS+ + HRD+KPEN L++S ++ LK TDFG + + + YYVAPEVL
Sbjct: 126 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL 185
Query: 243 R-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDA----ILRGHIDFSSDPWPNIS 297
Y D+WS GVI+YILL G PPF+ +I I G +F + W +S
Sbjct: 186 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 245
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKK 357
K +++ +L +P +R++ E +NHPW+ PL + + + + R + ++
Sbjct: 246 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWEDVKEE 305
Query: 358 VALKVIAENLSEEEI 372
+ + + E+I
Sbjct: 306 MTSALATMRVDYEQI 320
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 255 bits (652), Expect = 4e-82
Identities = 104/271 (38%), Positives = 155/271 (57%), Gaps = 6/271 (2%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDD---VEDVRREVQ 119
E+V + Y G ELG GQF V K T Q+A K I R+ + ED+ REV
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 120 IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVT 179
I+ + H N++ L YE++ V LI++L AGGELFD + K +E A +Q++
Sbjct: 66 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 124
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSP-LKATDFGLSVFFKPGDVFKDLVGSAYYVA 238
V+Y HS+ + H DLKPEN + P +K DFGL+ G+ FK++ G+ +VA
Sbjct: 125 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 184
Query: 239 PEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
PE++ G EAD+WS GVI YILLSG PF G+T+Q + + +F + + N S
Sbjct: 185 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 244
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ AKD ++++L DPK+R++ + L HPW++
Sbjct: 245 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 254 bits (649), Expect = 2e-81
Identities = 73/312 (23%), Positives = 134/312 (42%), Gaps = 18/312 (5%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
+D + RE+G G FG Y + A K +S + + +D+ +EV+ +
Sbjct: 11 DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 70
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVH 182
L H N ++ +G Y H+ L+M+ C G + K E A + + +
Sbjct: 71 KLR-HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLA 129
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL 242
Y HS ++HRD+K N L S E +K DFG + P + F VG+ Y++APEV+
Sbjct: 130 YLHSHNMIHRDVKAGNILLS---EPGLVKLGDFGSASIMAPANSF---VGTPYWMAPEVI 183
Query: 243 R----RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298
Y + D+WS G+ L PP + S I + + + + S
Sbjct: 184 LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN--ESPALQSGHWSE 241
Query: 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKV 358
++ V L P++R ++ +L H ++ ++P + + + A+ +L +
Sbjct: 242 YFRNFVDSCLQKIPQDRPTSEVLLKHRFVL-----RERPPTVIMDLIQRTKDAVRELDNL 296
Query: 359 ALKVIAENLSEE 370
+ + + L +E
Sbjct: 297 QYRKMKKILFQE 308
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 249 bits (638), Expect = 4e-80
Identities = 77/283 (27%), Positives = 138/283 (48%), Gaps = 16/283 (5%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
+ + + ELG G FG Y +K+T A K I ++ + +++ED E+ I+
Sbjct: 9 NPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILAS 65
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRII-AKGHYSERAAANLCRQMVTVVH 182
H NIV+L A+ +++ ++++ CAGG + ++ + +E +C+Q + ++
Sbjct: 66 CD-HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALN 124
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF-KPGDVFKDLVGSAYYVAPEV 241
Y H ++HRDLK N LF+ D +K DFG+S + +G+ Y++APEV
Sbjct: 125 YLHDNKIIHRDLKAGNILFT---LDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEV 181
Query: 242 L------RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295
+ R Y +AD+WS G+ L + PP + I + + P
Sbjct: 182 VMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SR 240
Query: 296 ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338
SS+ KD +KK L + R + +++L HP++ VD + + L
Sbjct: 241 WSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIREL 283
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 249 bits (638), Expect = 5e-80
Identities = 76/279 (27%), Positives = 129/279 (46%), Gaps = 12/279 (4%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
D + Y ++G+G G Y T Q+ A + + L + E + E+ +M
Sbjct: 16 GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVMR 72
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVH 182
+ NIV +Y + ++M+ AGG L D ++ + E A +CR+ + +
Sbjct: 73 EN-KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALE 130
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLVGSAYYVAPEV 241
+ HS V+HRD+K +N L D +K TDFG +VG+ Y++APEV
Sbjct: 131 FLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV 187
Query: 242 LRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300
+ R YG + DIWS G++ ++ G PP+ E I +P +S+
Sbjct: 188 VTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIF 246
Query: 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASD-KPL 338
+D + + L D ++R SA E+L H ++++ S PL
Sbjct: 247 RDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLTPL 285
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 248 bits (634), Expect = 2e-79
Identities = 83/270 (30%), Positives = 129/270 (47%), Gaps = 18/270 (6%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ FG+ LG G F L T +++A K + R +I + V V RE +M L H
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 68
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
V+L ++D + + GEL I G + E ++V+ + Y H G
Sbjct: 69 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 128
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVLR-R 244
++HRDLKPEN L + ED ++ TDFG + P VG+A YV+PE+L +
Sbjct: 129 IIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 185
Query: 245 NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
+ +D+W+ G I+Y L++G+PPF E IF I++ DF A+D+V
Sbjct: 186 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF----PEKFFPKARDLV 241
Query: 305 KKMLHADPKERLSAAE------VLNHPWMR 328
+K+L D +RL E + HP+
Sbjct: 242 EKLLVLDATKRLGCEEMEGYGPLKAHPFFE 271
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 246 bits (629), Expect = 5e-79
Identities = 74/265 (27%), Positives = 133/265 (50%), Gaps = 12/265 (4%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ + LG G +G L ++ T++ A K + ++ + D E++++E+ I L H
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLN-HE 63
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
N+V+ G + + L ++ C+GGELFDRI E A Q++ V Y H +G
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 123
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVLRRN 245
+ HRD+KPEN L LK +DFGL+ F+ + + + G+ YVAPE+L+R
Sbjct: 124 ITHRDIKPENLLLDE---RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 180
Query: 246 --YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303
+ D+WS G++L +L+G P+ ++ + + + +PW I S+ +
Sbjct: 181 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSAPLAL 239
Query: 304 VKKMLHADPKERLSAAEVLNHPWMR 328
+ K+L +P R++ ++ W
Sbjct: 240 LHKILVENPSARITIPDIKKDRWYN 264
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 240 bits (614), Expect = 4e-76
Identities = 75/270 (27%), Positives = 132/270 (48%), Gaps = 14/270 (5%)
Query: 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIM 121
+ED +I + LG+G FG +L K T Q FA K++ ++ DDVE E +++
Sbjct: 1 IED----FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVL 56
Query: 122 HHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVV 181
H + + ++ + ++ +M+ GG+L I + + A +++ +
Sbjct: 57 SLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGL 116
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD-VFKDLVGSAYYVAPE 240
+ HS G+++RDLK +N L +D +K DFG+ GD G+ Y+APE
Sbjct: 117 QFLHSKGIVYRDLKLDNILLD---KDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPE 173
Query: 241 VLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299
+L + Y D WS GV+LY +L G PF G+ E+ +F +I + + +
Sbjct: 174 ILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFY----PRWLEKE 229
Query: 300 AKDIVKKMLHADPKERLSAA-EVLNHPWMR 328
AKD++ K+ +P++RL ++ HP R
Sbjct: 230 AKDLLVKLFVREPEKRLGVRGDIRQHPLFR 259
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 237 bits (606), Expect = 1e-75
Identities = 57/267 (21%), Positives = 114/267 (42%), Gaps = 14/267 (5%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
F E+GRG F Y +T + A + RKL + + + + E +++ L H
Sbjct: 11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQ-HP 68
Query: 129 NIVELKGAYED----RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYC 184
NIV ++E + + L+ +L G L + + + CRQ++ + +
Sbjct: 69 NIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFL 128
Query: 185 HSMG--VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL 242
H+ ++HRDLK +N + +K D GL+ K K ++G+ ++APE+
Sbjct: 129 HTRTPPIIHRDLKCDNIFITG--PTGSVKIGDLGLATL-KRASFAKAVIGTPEFMAPEMY 185
Query: 243 RRNYGAEADIWSAGVILYILLSGVPPFWGE-TEQSIFDAILRGHIDFSSDPWPNISSSAK 301
Y D+++ G+ + + + P+ I+ + G + K
Sbjct: 186 EEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP--ASFDKVAIPEVK 243
Query: 302 DIVKKMLHADPKERLSAAEVLNHPWMR 328
+I++ + + ER S ++LNH + +
Sbjct: 244 EIIEGCIRQNKDERYSIKDLLNHAFFQ 270
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 229 bits (585), Expect = 2e-72
Identities = 62/269 (23%), Positives = 112/269 (41%), Gaps = 7/269 (2%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
+ Y G LG G +L + A K + + + RRE Q L
Sbjct: 7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-N 65
Query: 127 HRNIVELKGAYEDRHSVN----LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVH 182
H IV + E ++M+ G L D + +G + + A + ++
Sbjct: 66 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 125
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG-LSVFFKPGDVFKDLVGSAYYVAPEV 241
+ H G++HRD+KP N + S++ + ++ ++G+A Y++PE
Sbjct: 126 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 185
Query: 242 LR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300
R + A +D++S G +LY +L+G PPF G++ S+ +R S +S+
Sbjct: 186 ARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADL 245
Query: 301 KDIVKKMLHADPKERLSAAEVLNHPWMRV 329
+V K L +P+ R A + +RV
Sbjct: 246 DAVVLKALAKNPENRYQTAAEMRADLVRV 274
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 229 bits (585), Expect = 1e-71
Identities = 71/309 (22%), Positives = 118/309 (38%), Gaps = 49/309 (15%)
Query: 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIM 121
ME + + ELG G GV + V+HK + A K I I + RE+Q++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLI--HLEIKPAIRNQIIRELQVL 58
Query: 122 HHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVV 181
H IV GA+ +++ M+ GG L + G E+ + ++ +
Sbjct: 59 HECN-SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGL 117
Query: 182 HYCHSM-GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE 240
Y +MHRD+KP N L +S +K DFG+S + VG+ Y++PE
Sbjct: 118 TYLREKHKIMHRDVKPSNILVNS---RGEIKLCDFGVSGQL-IDSMANSFVGTRSYMSPE 173
Query: 241 VLR-RNYGAEADIWSAGVILYILLSGVPPFWGETE---QSIFDAILRGHIDFSSD----- 291
L+ +Y ++DIWS G+ L + G P + +F + G +
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTP 233
Query: 292 --------------------------------PWPNISSSAKDIVKKMLHADPKERLSAA 319
P S +D V K L +P ER
Sbjct: 234 GRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLK 293
Query: 320 EVLNHPWMR 328
+++ H +++
Sbjct: 294 QLMVHAFIK 302
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 227 bits (580), Expect = 4e-71
Identities = 75/266 (28%), Positives = 128/266 (48%), Gaps = 16/266 (6%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ R LG G FG +L+ + + +A K + ++ VE E ++ +T H
Sbjct: 6 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT-HP 64
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
I+ + G ++D + +IMD GGELF + + A ++ + Y HS
Sbjct: 65 FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKD 124
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYG 247
+++RDLKPEN L ++ +K TDFG + + DV L G+ Y+APEV+ + Y
Sbjct: 125 IIYRDLKPENILLD---KNGHIKITDFGFAKYVP--DVTYTLCGTPDYIAPEVVSTKPYN 179
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKM 307
D WS G+++Y +L+G PF+ ++ IL + F P + KD++ ++
Sbjct: 180 KSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRF----PPFFNEDVKDLLSRL 235
Query: 308 LHADPKERL-----SAAEVLNHPWMR 328
+ D +RL +V NHPW +
Sbjct: 236 ITRDLSQRLGNLQNGTEDVKNHPWFK 261
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 225 bits (575), Expect = 5e-71
Identities = 70/271 (25%), Positives = 114/271 (42%), Gaps = 21/271 (7%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y +G G +G + K + K + + + + + EV ++ L H
Sbjct: 6 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELD-YGSMTEAEKQMLVSEVNLLRELK-HP 63
Query: 129 NIVELKGAYEDRHS--VNLIMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVH 182
NIV DR + + ++M+ C GG+L I + + E + Q+ +
Sbjct: 64 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 123
Query: 183 YCHSMG-----VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF-KDLVGSAYY 236
CH V+HRDLKP N +K DFGL+ F K VG+ YY
Sbjct: 124 ECHRRSDGGHTVLHRDLKPANVFLD---GKQNVKLGDFGLARILNHDTSFAKAFVGTPYY 180
Query: 237 VAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295
++PE + R Y ++DIWS G +LY L + +PPF +++ + I G
Sbjct: 181 MSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR---IPYR 237
Query: 296 ISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
S +I+ +ML+ R S E+L +P
Sbjct: 238 YSDELNEIITRMLNLKDYHRPSVEEILENPL 268
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 223 bits (569), Expect = 4e-70
Identities = 79/267 (29%), Positives = 125/267 (46%), Gaps = 20/267 (7%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED---VRREVQIMHHL- 124
Y G LG G FG Y A K + ++ + ++ + V EV ++ +
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 125 TGHRNIVELKGAYEDRHSVNLIMDLCAGG-ELFDRIIAKGHYSERAAANLCRQMVTVVHY 183
+G ++ L +E S LI++ +LFD I +G E A + Q++ V +
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR 243
CH+ GV+HRD+K EN L LK DFG K V+ D G+ Y PE +R
Sbjct: 126 CHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIR 182
Query: 244 --RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
R +G A +WS G++LY ++ G PF + E I+RG + F +SS +
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFF----RQRVSSECQ 232
Query: 302 DIVKKMLHADPKERLSAAEVLNHPWMR 328
+++ L P +R + E+ NHPWM+
Sbjct: 233 HLIRWCLALRPSDRPTFEEIQNHPWMQ 259
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 225 bits (574), Expect = 1e-69
Identities = 70/271 (25%), Positives = 122/271 (45%), Gaps = 14/271 (5%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT- 125
N + R +GRG FG Y DT + +A K + +++ + E ++ ++
Sbjct: 4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63
Query: 126 -GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYC 184
IV + A+ ++ I+DL GG+L + G +SE +++ + +
Sbjct: 64 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 123
Query: 185 HSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR 244
H+ V++RDLKP N L E ++ +D GL+ F VG+ Y+APEVL++
Sbjct: 124 HNRFVVYRDLKPANILLD---EHGHVRISDLGLACDFSKKKPH-ASVGTHGYMAPEVLQK 179
Query: 245 N--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302
Y + AD +S G +L+ LL G PF + I R + + + + S +
Sbjct: 180 GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EIDRMTLTMAVELPDSFSPELRS 238
Query: 303 IVKKMLHADPKERLS-----AAEVLNHPWMR 328
+++ +L D RL A EV P+ R
Sbjct: 239 LLEGLLQRDVNRRLGCLGRGAQEVKESPFFR 269
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 220 bits (562), Expect = 4e-68
Identities = 83/269 (30%), Positives = 135/269 (50%), Gaps = 15/269 (5%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
N + + + LG+G FG LV K T + +A K + +I +D+V E +++ +
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR- 63
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
H + LK A++ + +M+ GGELF + + ++E A ++V+ + Y HS
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF-KPGDVFKDLVGSAYYVAPEVLRRN 245
V++RD+K EN + +D +K TDFGL G K G+ Y+APEVL N
Sbjct: 124 RDVVYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN 180
Query: 246 -YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
YG D W GV++Y ++ G PF+ + + +F+ IL I F +S AK ++
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF----PRTLSPEAKSLL 236
Query: 305 KKMLHADPKERLS-----AAEVLNHPWMR 328
+L DPK+RL A EV+ H +
Sbjct: 237 AGLLKKDPKQRLGGGPSDAKEVMEHRFFL 265
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 216 bits (550), Expect = 2e-66
Identities = 88/355 (24%), Positives = 138/355 (38%), Gaps = 51/355 (14%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
DV Y +G G +G+ K + A K I ++ + RE++I+
Sbjct: 5 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLR 62
Query: 124 LTGHRNIVELKGAYEDRHSVNL----IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVT 179
H NI+ + + ++ G +L+ ++ H S Q++
Sbjct: 63 FR-HENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYK-LLKTQHLSNDHICYFLYQILR 120
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG----DVFKDLVGSAY 235
+ Y HS V+HRDLKP N L + LK DFGL+ P + V + +
Sbjct: 121 GLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 177
Query: 236 YVAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPW 293
Y APE++ + Y DIWS G IL +LS P F G+ + IL S +
Sbjct: 178 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 237
Query: 294 ---------------------------PNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
PN S A D++ KML +P +R+ + L HP+
Sbjct: 238 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 297
Query: 327 MRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKS 381
+ D SD+P+ A K ++ L K LK L EE + ++S
Sbjct: 298 LEQYYDPSDEPIAEAPF---KFDMELDDLPKEKLK----ELIFEETARFQPGYRS 345
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 212 bits (540), Expect = 9e-66
Identities = 60/269 (22%), Positives = 108/269 (40%), Gaps = 19/269 (7%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
G+ +G G FG Y A K ++ ++ + EV ++
Sbjct: 7 DGQITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTR 62
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRI-IAKGHYSERAAANLCRQMVTVVHYC 184
H NI+ G Y + ++ C G L+ + I + + ++ RQ + Y
Sbjct: 63 -HVNILLFMG-YSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 120
Query: 185 HSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEV 241
H+ ++HRDLK N ED +K DFGL+ F+ L GS ++APEV
Sbjct: 121 HAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 177
Query: 242 LRRN----YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS--SDPWPN 295
+R Y ++D+++ G++LY L++G P+ + ++ S N
Sbjct: 178 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN 237
Query: 296 ISSSAKDIVKKMLHADPKERLSAAEVLNH 324
+ K ++ + L ER ++L
Sbjct: 238 CPKAMKRLMAECLKKKRDERPLFPQILAS 266
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 212 bits (539), Expect = 2e-65
Identities = 69/292 (23%), Positives = 110/292 (37%), Gaps = 33/292 (11%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDD--VEDVRREVQIMHHLTGHRNIVE 132
LG GQF Y K+T Q A K I D RE++++ L+ H NI+
Sbjct: 6 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS-HPNIIG 64
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L A+ + +++L+ D + + + Y H ++HR
Sbjct: 65 LLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHR 124
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFF-KPGDVFKDLVGSAYYVAPEVLR--RNYGAE 249
DLKP N L E+ LK DFGL+ F P + V + +Y APE+L R YG
Sbjct: 125 DLKPNNLLLD---ENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVG 181
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP--------------- 294
D+W+ G IL LL VP G+++ I + + WP
Sbjct: 182 VDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFP 241
Query: 295 ---------NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKP 337
D+++ + +P R++A + L + +
Sbjct: 242 GIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGC 293
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 210 bits (535), Expect = 2e-64
Identities = 76/274 (27%), Positives = 135/274 (49%), Gaps = 17/274 (6%)
Query: 69 YIFGRELGRGQFGVTYLVTH---KDTKQQFACKSISSRKLINR-DDVEDVRREVQIMHHL 124
+ + LG G +G +LV DT + +A K + ++ + E R E Q++ H+
Sbjct: 26 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI 85
Query: 125 TGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYC 184
+V L A++ ++LI+D GGELF + + ++E ++V + +
Sbjct: 86 RQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHL 145
Query: 185 HSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP--GDVFKDLVGSAYYVAPEVL 242
H +G+++RD+K EN L + + TDFGLS F + D G+ Y+AP+++
Sbjct: 146 HKLGIIYRDIKLENILLD---SNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIV 202
Query: 243 R---RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299
R + D WS GV++Y LL+G PF + E++ I R + +S+
Sbjct: 203 RGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSAL 262
Query: 300 AKDIVKKMLHADPKERLS-----AAEVLNHPWMR 328
AKD+++++L DPK+RL A E+ H + +
Sbjct: 263 AKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQ 296
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 208 bits (531), Expect = 1e-63
Identities = 73/313 (23%), Positives = 124/313 (39%), Gaps = 40/313 (12%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
+ K +VR Y + +G G +G T + A K + R + + RE
Sbjct: 9 VTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLY-RPFQSELFAKRAYRE 67
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGEL----FDRIIAKGHYSERAAANL 173
++++ H+ H N++ L + +++ D +++ E L
Sbjct: 68 LRLLKHMR-HENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFL 126
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
QM+ + Y H+ G++HRDLKP N + ED LK DFGL+ V +
Sbjct: 127 VYQMLKGLRYIHAAGIIHRDLKPGNLAVN---EDCELKILDFGLARQ--ADSEMTGYVVT 181
Query: 234 AYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
+Y APEV+ Y DIWS G I+ +++G F G I++ ++
Sbjct: 182 RWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAE 241
Query: 292 PW---------------------------PNISSSAKDIVKKMLHADPKERLSAAEVLNH 324
N S A ++++KML D ++R++A E L H
Sbjct: 242 FVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 301
Query: 325 PWMRVDGDASDKP 337
P+ D D+P
Sbjct: 302 PYFESLHDTEDEP 314
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 208 bits (531), Expect = 2e-63
Identities = 81/341 (23%), Positives = 128/341 (37%), Gaps = 49/341 (14%)
Query: 45 SATSATSSSVGRVLGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRK 104
S + ++ G+ +P E +Y + +G G FGV Y D+ + A K +
Sbjct: 1 SKVTTVVATPGQGPDRPQEV---SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---- 53
Query: 105 LINRDDVEDVRREVQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGG---EL 155
D RE+QIM L H NIV L+ + +D +NL++D
Sbjct: 54 ---LQDKRFKNRELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 109
Query: 156 FDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDF 215
AK Q+ + Y HS G+ HRD+KP+N L + + LK DF
Sbjct: 110 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCDF 167
Query: 216 GLSVFFKPGDVFKDLVGSAYYVAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWGET 273
G + G+ + S YY APE++ Y + D+WSAG +L LL G P F G++
Sbjct: 168 GSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Query: 274 EQSIFDAILRG-------------------------HIDFSSDPWPNISSSAKDIVKKML 308
I++ ++ P A + ++L
Sbjct: 228 GVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLL 287
Query: 309 HADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQF 349
P RL+ E H + D + K + + F
Sbjct: 288 EYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNF 328
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 208 bits (530), Expect = 3e-63
Identities = 75/268 (27%), Positives = 136/268 (50%), Gaps = 16/268 (5%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
+ + + LG G FG LV HK++ +A K + +K++ +E E +I+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-N 99
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
+V+L+ +++D ++ ++M+ AGGE+F + G +SE A Q+V Y HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RN 245
+ +++RDLKPEN L + ++ TDFG + K L G+ +APE++ +
Sbjct: 160 LDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVK--GRTWTLCGTPEALAPEIILSKG 214
Query: 246 YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305
Y D W+ GV++Y + +G PPF+ + I++ I+ G + F + SS KD+++
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF----PSHFSSDLKDLLR 270
Query: 306 KMLHADPKERL-----SAAEVLNHPWMR 328
+L D +R ++ NH W
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 206 bits (525), Expect = 4e-63
Identities = 73/310 (23%), Positives = 123/310 (39%), Gaps = 48/310 (15%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y ++G+G FG + H+ T Q+ A K + RE++I+ L H
Sbjct: 12 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE-KEGFPITALREIKILQLL-KHE 69
Query: 129 NIVELKGAYED--------RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTV 180
N+V L + S+ L+ D C ++ + + ++
Sbjct: 70 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNG 129
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG-----DVFKDLVGSAY 235
++Y H ++HRD+K N L + D LK DFGL+ F + + + V + +
Sbjct: 130 LYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLW 186
Query: 236 YVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPW 293
Y PE+L R+YG D+W AG I+ + + P G TEQ I + + + W
Sbjct: 187 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW 246
Query: 294 PNI----------------------------SSSAKDIVKKMLHADPKERLSAAEVLNHP 325
PN+ A D++ K+L DP +R+ + + LNH
Sbjct: 247 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD 306
Query: 326 WMRVDGDASD 335
+ D SD
Sbjct: 307 FFWSDPMPSD 316
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 205 bits (521), Expect = 3e-62
Identities = 68/301 (22%), Positives = 129/301 (42%), Gaps = 49/301 (16%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
++ Y R+LGRG++ + + ++ K++ + ++RE++I+ +L
Sbjct: 34 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVV------KILKPVKKKKIKREIKILENLR 87
Query: 126 GHRNIVELKGAYEDR--HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHY 183
G NI+ L +D + L+ + + ++ +++ + Y
Sbjct: 88 GGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDY 144
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR 243
CHSMG+MHRD+KP N + E L+ D+GL+ F+ PG + V S Y+ PE+L
Sbjct: 145 CHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLV 202
Query: 244 --RNYGAEADIWSAGVILYILLSGVPPFWGETE--------------QSIFDAILRGHID 287
+ Y D+WS G +L ++ PF+ + + ++D I + +I+
Sbjct: 203 DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE 262
Query: 288 --------------------FSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
S+ +S A D + K+L D + RL+A E + HP+
Sbjct: 263 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 322
Query: 328 R 328
Sbjct: 323 Y 323
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 202 bits (513), Expect = 1e-61
Identities = 80/295 (27%), Positives = 124/295 (42%), Gaps = 38/295 (12%)
Query: 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIM 121
ME Y ++G G +GV Y + + FA K I K + RE+ I+
Sbjct: 1 MEK----YHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKE-DEGIPSTTIREISIL 54
Query: 122 HHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVV 181
L H NIV+L + + L+ + + +G A + Q++ +
Sbjct: 55 KELK-HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGI 113
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF-KPGDVFKDLVGSAYYVAPE 240
YCH V+HRDLKP+N L + + LK DFGL+ F P + + + +Y AP+
Sbjct: 114 AYCHDRRVLHRDLKPQNLLINR---EGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPD 170
Query: 241 VLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNI-- 296
VL + Y DIWS G I +++G P F G +E I R +S WPN+
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTE 230
Query: 297 -----------------------SSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
S D++ KML DP +R++A + L H + +
Sbjct: 231 LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 199 bits (507), Expect = 1e-60
Identities = 69/296 (23%), Positives = 120/296 (40%), Gaps = 38/296 (12%)
Query: 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIM 121
M+ Y ++G G +G + +++T + A K + + RE+ ++
Sbjct: 1 MQK----YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDD-DDEGVPSSALREICLL 55
Query: 122 HHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVV 181
L H+NIV L + L+ + C G + Q++ +
Sbjct: 56 KELK-HKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGL 114
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF-KPGDVFKDLVGSAYYVAPE 240
+CHS V+HRDLKP+N L + + LK +FGL+ F P + V + +Y P+
Sbjct: 115 GFCHSRNVLHRDLKPQNLLINR---NGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPD 171
Query: 241 VL--RRNYGAEADIWSAGVILYILLSG-VPPFWGETEQSIFDAILRGHIDFSSDPW---- 293
VL + Y D+WSAG I L + P F G I R + + W
Sbjct: 172 VLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT 231
Query: 294 ---------------------PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
P ++++ +D+++ +L +P +R+SA E L HP+
Sbjct: 232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 199 bits (507), Expect = 1e-60
Identities = 68/293 (23%), Positives = 116/293 (39%), Gaps = 37/293 (12%)
Query: 69 YIFGRELGRGQFGVTYLVTH-KDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG- 126
Y E+G G +G + K+ + A K + + REV ++ HL
Sbjct: 9 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVR-VQTGEEGMPLSTIREVAVLRHLETF 67
Query: 127 -HRNIVELKGAYEDRHS-----VNLIMDLCAGGEL-FDRIIAKGHYSERAAANLCRQMVT 179
H N+V L + + L+ + + + + ++ Q++
Sbjct: 68 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLR 127
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAP 239
+ + HS V+HRDLKP+N L +S +K DFGL+ + +V + +Y AP
Sbjct: 128 GLDFLHSHRVVHRDLKPQNILVTS---SGQIKLADFGLARIYSFQMALTSVVVTLWYRAP 184
Query: 240 EVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP---- 294
EVL ++ Y D+WS G I + P F G ++ IL + WP
Sbjct: 185 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 244
Query: 295 -------------------NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+I KD++ K L +P +R+SA L+HP+ +
Sbjct: 245 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 297
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 198 bits (505), Expect = 9e-60
Identities = 76/314 (24%), Positives = 127/314 (40%), Gaps = 40/314 (12%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 9 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 67
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSV----NLIMDLCAGGELFDRIIAKGHYSERAAANL 173
++++ H+ H N++ L + S+ ++ + G + I+ ++ L
Sbjct: 68 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 126
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V +
Sbjct: 127 IYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDEMTGYVAT 181
Query: 234 AYYVAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS-- 289
+Y APE++ Y DIWS G I+ LL+G F G ILR
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 241
Query: 290 -------------------------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324
++ + + A D+++KML D +R++AA+ L H
Sbjct: 242 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 301
Query: 325 PWMRVDGDASDKPL 338
+ D D+P+
Sbjct: 302 AYFAQYHDPDDEPV 315
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 196 bits (499), Expect = 2e-59
Identities = 74/296 (25%), Positives = 119/296 (40%), Gaps = 38/296 (12%)
Query: 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIM 121
ME+ + ++G G +GV Y +K T + A K I RE+ ++
Sbjct: 1 MEN----FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLL 55
Query: 122 HHLTGHRNIVELKGAYEDRHSVNLIMDLCA-GGELFDRIIAKGHYSERAAANLCRQMVTV 180
L H NIV+L + + L+ + + F A + Q++
Sbjct: 56 KEL-NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF-KPGDVFKDLVGSAYYVAP 239
+ +CHS V+HRDLKP+N L + + +K DFGL+ F P + V + +Y AP
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 171
Query: 240 EVLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPW---- 293
E+L Y DIWS G I +++ F G++E I R W
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 231
Query: 294 ---------------------PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
P + + ++ +MLH DP +R+SA L HP+ +
Sbjct: 232 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 196 bits (500), Expect = 2e-59
Identities = 63/277 (22%), Positives = 108/277 (38%), Gaps = 24/277 (8%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
N F +G G FG K + ++ ++DD D E++++ L
Sbjct: 9 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG 68
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRI----------------IAKGHYSERA 169
H NI+ L GA E R + L ++ G L D + S +
Sbjct: 69 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 128
Query: 170 AANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD 229
+ + + Y +HRDL N L E+ K DFGLS +
Sbjct: 129 LLHFAADVARGMDYLSQKQFIHRDLAARNILVG---ENYVAKIADFGLSRGQEVYVKKTM 185
Query: 230 LVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHID 287
++A E L + Y +D+WS GV+L+ ++S G P+ G T +++ + +G
Sbjct: 186 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG--- 242
Query: 288 FSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324
+ + N D++++ P ER S A++L
Sbjct: 243 YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 279
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 194 bits (494), Expect = 1e-58
Identities = 59/294 (20%), Positives = 104/294 (35%), Gaps = 24/294 (8%)
Query: 64 DVR--NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIM 121
++R N Y GR++G G FG YL T ++ A K + + E +I
Sbjct: 2 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-----KHPQLHIESKIY 56
Query: 122 HHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVV 181
+ G I ++ + ++M+L +S + L QM++ +
Sbjct: 57 KMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRI 116
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF--------KDLVGS 233
Y HS +HRD+KP+NFL + + + DFGL+ ++ K+L G+
Sbjct: 117 EYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGT 176
Query: 234 AYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292
A Y + D+ S G +L G P+ G + R S P
Sbjct: 177 ARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP 236
Query: 293 ----WPNISSSAKDIVKKMLHADPKERLSAAEV---LNHPWMRVDGDASDKPLD 339
S + ++ + + + + R G + D D
Sbjct: 237 IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR-QGFSYDYVFD 289
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 194 bits (493), Expect = 3e-58
Identities = 61/290 (21%), Positives = 108/290 (37%), Gaps = 36/290 (12%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKL---INRDDVEDVRREVQIMH 122
R FG+ LG G FG T + ++ + L + + E + E+++M
Sbjct: 36 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMT 95
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH------------------ 164
L H NIV L GA + LI + C G+L + + +K
Sbjct: 96 QLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEE 155
Query: 165 -----YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219
+ Q+ + + +HRDL N L + +K DFGL+
Sbjct: 156 EDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVT---HGKVVKICDFGLAR 212
Query: 220 FFKPGD---VFKDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLS-GVPPFWGETE 274
V + ++APE L Y ++D+WS G++L+ + S GV P+ G
Sbjct: 213 DIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV 272
Query: 275 QSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324
+ F +++ D + I++ D ++R S + +
Sbjct: 273 DANFYKLIQNGFKM--DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF 320
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 192 bits (489), Expect = 4e-58
Identities = 65/275 (23%), Positives = 108/275 (39%), Gaps = 23/275 (8%)
Query: 66 RNTYIFG-RELGRGQFGVTYLVTHKDTKQQ--FACKSISSRKLINRDDVEDVRREVQIMH 122
R+ + ELG G FG ++ K+Q A K + ++ + D E++ RE QIMH
Sbjct: 7 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVL--KQGTEKADTEEMMREAQIMH 64
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVV 181
L + IV L G + ++ L+M++ GG L ++ K A L Q+ +
Sbjct: 65 QLD-NPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGM 122
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL----VGSAYYV 237
Y +HRDL N L K +DFGLS D + +
Sbjct: 123 KYLEEKNFVHRDLAARNVLLV---NRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWY 179
Query: 238 APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295
APE + R + + +D+WS GV ++ LS G P+ + I +G + P
Sbjct: 180 APECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM---ECPPE 236
Query: 296 ISSSAKDIVKKMLHADPKERLSAAEV---LNHPWM 327
++ ++R V + +
Sbjct: 237 CPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 271
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 191 bits (486), Expect = 5e-58
Identities = 60/269 (22%), Positives = 109/269 (40%), Gaps = 25/269 (9%)
Query: 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
M++ + +G+G+FG L ++ K A K I N + E +
Sbjct: 5 NMKE----LKLLQTIGKGEFGDVMLGDYRGNK--VAVKCIK-----NDATAQAFLAEASV 53
Query: 121 MHHLTGHRNIVELKGA-YEDRHSVNLIMDLCAGGELFDRIIAKGH--YSERAAANLCRQM 177
M L H N+V+L G E++ + ++ + A G L D + ++G +
Sbjct: 54 MTQLR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDV 112
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV 237
+ Y +HRDL N L S ED+ K +DFGL+ +
Sbjct: 113 CEAMEYLEGNNFVHRDLAARNVLVS---EDNVAKVSDFGLTKEASSTQ--DTGKLPVKWT 167
Query: 238 APEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295
APE LR + + ++D+WS G++L+ + S G P+ + + + +G + D
Sbjct: 168 APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG---YKMDAPDG 224
Query: 296 ISSSAKDIVKKMLHADPKERLSAAEVLNH 324
+ +++K H D R S ++
Sbjct: 225 CPPAVYEVMKNCWHLDAAMRPSFLQLREQ 253
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 191 bits (485), Expect = 1e-57
Identities = 57/268 (21%), Positives = 103/268 (38%), Gaps = 20/268 (7%)
Query: 73 RELGRGQFGVTYLVTHKDTK--QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
+ELG G FG ++ K + A K + + + +++ E +M L + I
Sbjct: 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILK-NEANDPALKDELLAEANVMQQLD-NPYI 70
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVM 190
V + G E S L+M++ G L + H ++ L Q+ + Y +
Sbjct: 71 VRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFV 129
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD----LVGSAYYVAPEVLRRN- 245
HRDL N L + K +DFGLS + + + + APE +
Sbjct: 130 HRDLAARNVLLVT---QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 186
Query: 246 YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
+ +++D+WS GV+++ S G P+ G + + +G D++
Sbjct: 187 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM---GCPAGCPREMYDLM 243
Query: 305 KKMLHADPKERLSAAEV---LNHPWMRV 329
D + R A V L + + V
Sbjct: 244 NLCWTYDVENRPGFAAVELRLRNYYYDV 271
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 188 bits (478), Expect = 1e-56
Identities = 60/266 (22%), Positives = 101/266 (37%), Gaps = 17/266 (6%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQ---FACKSISSRKLINRDDVEDVRREVQIMHHLT 125
+LG G FGV + A K + L + ++D REV MH L
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYC 184
HRN++ L G + ++ +L G L DR+ GH+ + Q+ + Y
Sbjct: 70 -HRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 127
Query: 185 HSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD----VFKDLVGSAYYVAPE 240
S +HRDL N L + +K DFGL D + + + APE
Sbjct: 128 ESKRFIHRDLAARNLLLA---TRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
Query: 241 VLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298
L+ R + +D W GV L+ + + G P+ G I I + +
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL--PRPEDCPQ 242
Query: 299 SAKDIVKKMLHADPKERLSAAEVLNH 324
+++ + P++R + + +
Sbjct: 243 DIYNVMVQCWAHKPEDRPTFVALRDF 268
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 187 bits (476), Expect = 5e-56
Identities = 58/272 (21%), Positives = 108/272 (39%), Gaps = 17/272 (6%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISS-RKLINRDDVEDVRREVQIM 121
E + + +G G+FG K ++ +I + + D E IM
Sbjct: 22 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIM 81
Query: 122 HHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTV 180
H N++ L+G V +I + G L + G ++ + R +
Sbjct: 82 GQFD-HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAG 140
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL------VGSA 234
+ Y M +HRDL N L + + K +DFGLS F +
Sbjct: 141 MKYLADMNYVHRDLAARNILVN---SNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPI 197
Query: 235 YYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDP 292
+ APE ++ R + + +D+WS G++++ ++S G P+W T Q + +AI + D+ P
Sbjct: 198 RWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQ---DYRLPP 254
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324
+ S+ ++ D R +++N
Sbjct: 255 PMDCPSALHQLMLDCWQKDRNHRPKFGQIVNT 286
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 185 bits (470), Expect = 1e-55
Identities = 59/261 (22%), Positives = 110/261 (42%), Gaps = 17/261 (6%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
F +ELG GQFGV + A K I + ++ E ++M +L+ H
Sbjct: 6 LTFLKELGTGQFGVVKYGKWRGQ-YDVAIKMIKEGSMSE----DEFIEEAKVMMNLS-HE 59
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRI-IAKGHYSERAAANLCRQMVTVVHYCHSM 187
+V+L G + + +I + A G L + + + + + +C+ + + Y S
Sbjct: 60 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 119
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD--VFKDLVGSAYYVAPEVLRRN 245
+HRDL N L + + +K +DFGLS + + + PEVL +
Sbjct: 120 QFLHRDLAARNCLVN---DQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYS 176
Query: 246 -YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303
+ +++DIW+ GV+++ + S G P+ T + I +G + S I
Sbjct: 177 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLY---RPHLASEKVYTI 233
Query: 304 VKKMLHADPKERLSAAEVLNH 324
+ H ER + +L++
Sbjct: 234 MYSCWHEKADERPTFKILLSN 254
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 184 bits (469), Expect = 2e-55
Identities = 67/265 (25%), Positives = 108/265 (40%), Gaps = 14/265 (5%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSI-SSRKLINRDDVEDVRREVQIMHHL 124
R GR +G GQFG + + + +I + + + E +E M
Sbjct: 6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF 65
Query: 125 TGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHY 183
H +IV+L G + V +IM+LC GEL + + + Q+ T + Y
Sbjct: 66 -DHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 123
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFK--DLVGSAYYVAPEV 241
S +HRD+ N L SS+ +K DFGLS + + +K ++APE
Sbjct: 124 LESKRFVHRDIAARNVLVSSNDC---VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 180
Query: 242 LR-RNYGAEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299
+ R + + +D+W GV ++ IL+ GV PF G + I G PN +
Sbjct: 181 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL---PMPPNCPPT 237
Query: 300 AKDIVKKMLHADPKERLSAAEVLNH 324
++ K DP R E+
Sbjct: 238 LYSLMTKCWAYDPSRRPRFTELKAQ 262
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 184 bits (468), Expect = 5e-55
Identities = 57/270 (21%), Positives = 111/270 (41%), Gaps = 21/270 (7%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
R + +LG+G FG ++ T T + A K++ + E +E Q+M L
Sbjct: 16 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKL- 69
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHY 183
H +V+L + + ++ + + G L D + + + ++ Q+ + + Y
Sbjct: 70 RHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 128
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD--LVGSAYYVAPEV 241
M +HRDL+ N L E+ K DFGL+ + + + APE
Sbjct: 129 VERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 185
Query: 242 LRRN-YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299
+ ++D+WS G++L L + G P+ G + + D + RG + P S
Sbjct: 186 ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPES 242
Query: 300 AKDIVKKMLHADPKERLSAAEVLN--HPWM 327
D++ + +P+ER + + +
Sbjct: 243 LHDLMCQCWRKEPEERPTFEYLQAFLEDYF 272
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 182 bits (463), Expect = 1e-54
Identities = 59/264 (22%), Positives = 113/264 (42%), Gaps = 17/264 (6%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
+ F +E+G GQFG+ +L + + A K+I + ED E ++M L+
Sbjct: 4 PSELTFVQEIGSGQFGLVHLGYWLNK-DKVAIKTIREGAM----SEEDFIEEAEVMMKLS 58
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH-YSERAAANLCRQMVTVVHYC 184
H +V+L G ++ + L+ + G L D + + ++ +C + + Y
Sbjct: 59 -HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL 117
Query: 185 HSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD--VFKDLVGSAYYVAPEVL 242
V+HRDL N L E+ +K +DFG++ F + +PEV
Sbjct: 118 EEACVIHRDLAARNCLVG---ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVF 174
Query: 243 RRN-YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300
+ Y +++D+WS GV+++ + S G P+ + + + I G F S+
Sbjct: 175 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG---FRLYKPRLASTHV 231
Query: 301 KDIVKKMLHADPKERLSAAEVLNH 324
I+ P++R + + +L
Sbjct: 232 YQIMNHCWKERPEDRPAFSRLLRQ 255
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 184 bits (468), Expect = 2e-54
Identities = 76/326 (23%), Positives = 124/326 (38%), Gaps = 53/326 (16%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
+G V Y + +G G G+ + A K +S R N+ + RE
Sbjct: 8 VGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRE 66
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
+ +M + H+NI+ L + E+ V L+M+L + +
Sbjct: 67 LVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMS 122
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L QM+ + + HS G++HRDLKP N + S D LK DFGL+ + V
Sbjct: 123 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYV 179
Query: 232 GSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG------ 284
+ YY APEV+ Y DIWS G I+ ++ F G ++ ++
Sbjct: 180 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 239
Query: 285 --------------------------------HIDFSSDPWPNISSSAKDIVKKMLHADP 312
S+ +S A+D++ KML DP
Sbjct: 240 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDP 299
Query: 313 KERLSAAEVLNHPWMRVDGDASDKPL 338
+R+S + L HP++ V D ++
Sbjct: 300 AKRISVDDALQHPYINVWYDPAEVEA 325
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 181 bits (459), Expect = 1e-53
Identities = 58/263 (22%), Positives = 106/263 (40%), Gaps = 17/263 (6%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
R +LG GQ+G Y K A K++ + +VE+ +E +M +
Sbjct: 16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE----DTMEVEEFLKEAAVMKEIK 71
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHY--SERAAANLCRQMVTVVHY 183
H N+V+L G +I + G L D + S + Q+ + + Y
Sbjct: 72 -HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 130
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD--VFKDLVGSAYYVAPEV 241
+HRDL N L E+ +K DFGLS + APE
Sbjct: 131 LEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 187
Query: 242 LRRN-YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299
L N + ++D+W+ GV+L+ + + G+ P+ G +++ + + D+ +
Sbjct: 188 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEK 244
Query: 300 AKDIVKKMLHADPKERLSAAEVL 322
++++ +P +R S AE+
Sbjct: 245 VYELMRACWQWNPSDRPSFAEIH 267
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 181 bits (459), Expect = 1e-53
Identities = 59/292 (20%), Positives = 98/292 (33%), Gaps = 22/292 (7%)
Query: 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHL 124
V Y GR +G G FGV + T+ QQ A K R D +R E + L
Sbjct: 3 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-----DAPQLRDEYRTYKLL 57
Query: 125 TGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYC 184
G I + ++ L++DL + +S + A +QM+ V
Sbjct: 58 AGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSI 117
Query: 185 HSMGVMHRDLKPENFLFSS--SAEDSPLKATDFGLSVFFKPGDV--------FKDLVGSA 234
H +++RD+KP+NFL S + + DFG+ F++ K+L G+A
Sbjct: 118 HEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTA 177
Query: 235 YYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP- 292
Y++ R D+ + G + L G P+ G + R S P
Sbjct: 178 RYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPL 237
Query: 293 ---WPNISSSAKDIVKKMLHADPKERLSAAEVLN--HPWMRVDGDASDKPLD 339
+ + + + D+ D
Sbjct: 238 RELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDENFD 289
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 179 bits (454), Expect = 3e-53
Identities = 51/264 (19%), Positives = 100/264 (37%), Gaps = 19/264 (7%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
R T LG GQFG ++ + + A KS+ + + E +M L
Sbjct: 12 RETLKLVERLGAGQFGEVWMGYYNGH-TKVAVKSLKQGSM----SPDAFLAEANLMKQLQ 66
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHY 183
H+ +V L + +I + G L D + + ++ Q+ + +
Sbjct: 67 -HQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD--LVGSAYYVAPEV 241
+HRDL+ N L S + K DFGL+ + + + APE
Sbjct: 125 IEERNYIHRDLRAANILVSDTLSC---KIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 181
Query: 242 LRRN-YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299
+ + ++D+WS G++L +++ G P+ G T + + RG + N
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG---YRMVRPDNCPEE 238
Query: 300 AKDIVKKMLHADPKERLSAAEVLN 323
+++ P++R + + +
Sbjct: 239 LYQLMRLCWKERPEDRPTFDYLRS 262
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 178 bits (453), Expect = 9e-53
Identities = 57/284 (20%), Positives = 110/284 (38%), Gaps = 30/284 (10%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQ-------QFACKSISSRKLINRDDVEDVRREV 118
R+ + G+ LG G FG L + + A K + + D+ D+ E+
Sbjct: 12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLSDLISEM 69
Query: 119 QIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRI----------------IAK 162
++M + H+NI+ L GA + +I++ + G L + + +
Sbjct: 70 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 129
Query: 163 GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222
S + + Q+ + Y S +HRDL N L +
Sbjct: 130 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 189
Query: 223 PGDVFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDA 280
+ ++APE L R Y ++D+WS GV+L+ + + G P+ G + +F
Sbjct: 190 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 249
Query: 281 ILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324
+ GH D N ++ +++ HA P +R + +++
Sbjct: 250 LKEGHR---MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 290
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 178 bits (453), Expect = 1e-52
Identities = 66/285 (23%), Positives = 108/285 (37%), Gaps = 35/285 (12%)
Query: 66 RNTYIFGRELGRGQFGVTYLVT-----HKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
RN FG+ LG G FG T D A K + + + E + E+++
Sbjct: 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKV 79
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH---------------- 164
+ +L H NIV L GA +I + C G+L + + K
Sbjct: 80 LSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 139
Query: 165 --YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222
+ Q+ + + S +HRDL N L + K DFGL+ K
Sbjct: 140 LALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT---HGRITKICDFGLARDIK 196
Query: 223 PGD---VFKDLVGSAYYVAPEVLRRNY-GAEADIWSAGVILYILLS-GVPPFWGETEQSI 277
V + ++APE + E+D+WS G+ L+ L S G P+ G S
Sbjct: 197 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 256
Query: 278 FDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVL 322
F +++ + + DI+K ADP +R + +++
Sbjct: 257 FYKMIKEGFRM--LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 299
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 176 bits (447), Expect = 8e-52
Identities = 63/295 (21%), Positives = 113/295 (38%), Gaps = 43/295 (14%)
Query: 62 MEDVRNTYIFGRELGRGQFGVTYLVTHK-----DTKQQFACKSISSRKLINRDDVEDVRR 116
+E RN + R++G G FG + + A K + + D D +R
Sbjct: 8 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQR 65
Query: 117 EVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHY----------- 165
E +M + NIV+L G + L+ + A G+L + + + +
Sbjct: 66 EAALMAEF-DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLS 124
Query: 166 -------------SERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKA 212
S + RQ+ + Y +HRDL N L E+ +K
Sbjct: 125 TRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVG---ENMVVKI 181
Query: 213 TDFGLSVFFKPGDVFK---DLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLS-GVP 267
DFGLS D +K + ++ PE + N Y E+D+W+ GV+L+ + S G+
Sbjct: 182 ADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQ 241
Query: 268 PFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVL 322
P++G + + + G+I N ++++ P +R S +
Sbjct: 242 PYYGMAHEEVIYYVRDGNI---LACPENCPLELYNLMRLCWSKLPADRPSFCSIH 293
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 173 bits (438), Expect = 3e-50
Identities = 51/263 (19%), Positives = 95/263 (36%), Gaps = 14/263 (5%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSI--SSRKLINRDDVEDVRREVQIMHHLTG 126
+ + LG G FG Y ++ R+ + +++ E +M +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD- 69
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
+ ++ L G + + G L K + + N C Q+ ++Y
Sbjct: 70 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 129
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVLR 243
++HRDL N L +K TDFGL+ + + ++A E +
Sbjct: 130 RRLVHRDLAARNVLVK---TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 186
Query: 244 -RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
R Y ++D+WS GV ++ L++ G P+ G I + +G P +
Sbjct: 187 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE---RLPQPPICTIDVY 243
Query: 302 DIVKKMLHADPKERLSAAEVLNH 324
I+ K D R E++
Sbjct: 244 MIMVKCWMIDADSRPKFRELIIE 266
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 164 bits (415), Expect = 2e-47
Identities = 57/269 (21%), Positives = 108/269 (40%), Gaps = 20/269 (7%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQ----FACKSISSRKLINRDDVEDVRREVQIM 121
+ + +G G+FG Y K + + A K++ + D E IM
Sbjct: 6 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTL--KAGYTEKQRVDFLGEAGIM 63
Query: 122 HHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTV 180
H NI+ L+G + +I + G L + K G +S + R +
Sbjct: 64 GQF-SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAG 122
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD----VFKDLVGSAYY 236
+ Y +M +HRDL N L +S+ K +DFGLS + +
Sbjct: 123 MKYLANMNYVHRDLAARNILVNSNLV---CKVSDFGLSRVLEDDPEATYTTSGGKIPIRW 179
Query: 237 VAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWP 294
APE + R + + +D+WS G++++ +++ G P+W + + AI G F
Sbjct: 180 TAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG---FRLPTPM 236
Query: 295 NISSSAKDIVKKMLHADPKERLSAAEVLN 323
+ S+ ++ + + R A++++
Sbjct: 237 DCPSAIYQLMMQCWQQERARRPKFADIVS 265
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 164 bits (417), Expect = 2e-47
Identities = 62/283 (21%), Positives = 114/283 (40%), Gaps = 29/283 (10%)
Query: 62 MEDVRNTYI--------FGRELGRGQFGVTYLVTHKD---TKQQFACKSISSRKLINRDD 110
++ V++ I F +GRG FG Y T D K A KS+ ++ + +
Sbjct: 14 VQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGE 71
Query: 111 VEDVRREVQIMHHLTGHRNIVELKGA-YEDRHSVNLIMDLCAGGELFDRIIAKGH-YSER 168
V E IM + H N++ L G S +++ G+L + I + H + +
Sbjct: 72 VSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 130
Query: 169 AAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFK 228
Q+ + + S +HRDL N + E +K DFGL+ +
Sbjct: 131 DLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD---EKFTVKVADFGLARDMYDKEFDS 187
Query: 229 DL-----VGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAI 281
++A E L+ + ++D+WS GV+L+ L++ G PP+ I +
Sbjct: 188 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 247
Query: 282 LRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324
L+G + +++ K H + R S +E+++
Sbjct: 248 LQGRRLLQPE---YCPDPLYEVMLKCWHPKAEMRPSFSELVSR 287
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 162 bits (411), Expect = 1e-46
Identities = 57/289 (19%), Positives = 117/289 (40%), Gaps = 35/289 (12%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHK-----DTKQQFACKSISSRKLINRDDVEDVRREVQI 120
R RELG+G FG+ Y K + + + A K++ + + + + E +
Sbjct: 19 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV--NEAASMRERIEFLNEASV 76
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH----------YSERAA 170
M ++V L G +IM+L G+L + + S
Sbjct: 77 MKEF-NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 135
Query: 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFK-- 228
+ ++ + Y ++ +HRDL N + + ED +K DFG++ D ++
Sbjct: 136 IQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMTRDIYETDYYRKG 192
Query: 229 -DLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGV-PPFWGETEQSIFDAILRGH 285
+ +++PE L+ + +D+WS GV+L+ + + P+ G + + + ++ G
Sbjct: 193 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG 252
Query: 286 IDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN------HPWMR 328
+ D N ++++ +PK R S E+++ P R
Sbjct: 253 LL---DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFR 298
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 156 bits (395), Expect = 2e-44
Identities = 61/286 (21%), Positives = 109/286 (38%), Gaps = 34/286 (11%)
Query: 66 RNTYIFGRELGRGQFGVTYLVT-----HKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
R+ G+ LGRG FG T + A K + ++ + + E++I
Sbjct: 12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKI 69
Query: 121 MHHLTGHRNIVELKGA-YEDRHSVNLIMDLCAGGELFDRI----------------IAKG 163
+ H+ H N+V L GA + + +I++ C G L + + K
Sbjct: 70 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 129
Query: 164 HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223
+ Q+ + + S +HRDL N L S E + +K DFGL+
Sbjct: 130 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYK 186
Query: 224 GDVF---KDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGV-PPFWGETEQSIF 278
+ D ++APE + Y ++D+WS GV+L+ + S P+ G F
Sbjct: 187 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 246
Query: 279 DAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324
L+ + + H +P +R + +E++ H
Sbjct: 247 CRRLKEGTRM--RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 290
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 149 bits (378), Expect = 7e-42
Identities = 55/299 (18%), Positives = 100/299 (33%), Gaps = 51/299 (17%)
Query: 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHL 124
+ T + +G+G+FG + K ++ A K SSR+ + E+ L
Sbjct: 1 IARTIVLQESIGKGRFGEVWRG--KWRGEEVAVKIFSSRE----ERSWFREAEIYQTVML 54
Query: 125 TGHRNIVELKGAYEDRHSVN----LIMDLCAGGELFDRIIAKGHYSERA-------AANL 173
H NI+ A + L+ D G LFD + E A+ L
Sbjct: 55 R-HENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGL 113
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD-----VFK 228
+ +V + HRDLK +N L ++ D GL+V
Sbjct: 114 AHLHMEIVGTQGKPAIAHRDLKSKNILVK---KNGTCCIADLGLAVRHDSATDTIDIAPN 170
Query: 229 DLVGSAYYVAPEVLRRN-------YGAEADIWSAGVILYILLSGVPPFWGETE------- 274
VG+ Y+APEVL + ADI++ G++ + + +
Sbjct: 171 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 230
Query: 275 --------QSIFDAILRGHIDFSSDPW---PNISSSAKDIVKKMLHADPKERLSAAEVL 322
+ + + + + I+++ +A+ RL+A +
Sbjct: 231 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIK 289
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 148 bits (373), Expect = 1e-40
Identities = 60/335 (17%), Positives = 111/335 (33%), Gaps = 72/335 (21%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
G+P +D R YI R+LG G F +L A K + K+ E E
Sbjct: 6 KGEPYKDAR--YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYT----EAAEDE 59
Query: 118 VQIMHHL----------TGHRNIVELKGAYEDRHSVNLIMDL-----CAGGELFDRIIAK 162
++++ + G +I++L + + + + + +
Sbjct: 60 IKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEH 119
Query: 163 GHYSERAAANLCRQMVTVVHYC-HSMGVMHRDLKPENFLFSSS---AEDSPLKATDFGLS 218
+ +Q++ + Y G++H D+KPEN L +K D G +
Sbjct: 120 RGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA 179
Query: 219 VFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSI 277
++ + Y +PEVL +G ADIWS +++ L++G F + S
Sbjct: 180 CWYDEHYTNSI--QTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSY 237
Query: 278 FDAI--------------------------------------------LRGHIDFSSDPW 293
L +
Sbjct: 238 TKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFS 297
Query: 294 PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ + D + ML DP++R A ++NHPW++
Sbjct: 298 KDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLK 332
|
| >d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} Length = 181 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Neurocalcin species: Cow (Bos taurus) [TaxId: 9913]
Score = 121 bits (305), Expect = 5e-33
Identities = 44/177 (24%), Positives = 78/177 (44%), Gaps = 19/177 (10%)
Query: 354 KLKKVALKVIAE--NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE- 410
KL+ ++ + E + +E EI + F SG ++ EE K S+
Sbjct: 3 KLRPEVMQDLLESTDFTEHEIQEWYKGFL--RDCPSGHLSMEEFKKIYGNFFPYGDASKF 60
Query: 411 VRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHA 470
+ D +G+GTID+ EFI A +R + E+ L AF +D D +GYI+ E+
Sbjct: 61 AEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEI 120
Query: 471 LKKYN-------------MGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGNPDMV 514
++ K ++I ++D + DG+++ EEF + +P +V
Sbjct: 121 VQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKS-DPSIV 176
|
| >d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 120 bits (301), Expect = 8e-33
Identities = 54/147 (36%), Positives = 82/147 (55%), Gaps = 3/147 (2%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
+ NL+EE+I KE F D DN+G+I+ EL + LG SE+EV LM DVDGN
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 60
Query: 424 GTIDYIEFITA-TMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT- 481
I++ EF+ + + + E+ L +AF+ FDK+ G I+ EL+H L
Sbjct: 61 HQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAE 120
Query: 482 IKEIIAEVDIDNDGRINYEEFAAMMRK 508
+ +++ EV D G IN ++FAA++ K
Sbjct: 121 VDDMLREVS-DGSGEINIQQFAALLSK 146
|
| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]
Score = 119 bits (298), Expect = 2e-32
Identities = 60/144 (41%), Positives = 82/144 (56%), Gaps = 2/144 (1%)
Query: 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNG 424
E L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGNG
Sbjct: 1 EQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 60
Query: 425 TIDYIEFITA-TMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTI 482
TID+ EF++ M + EE L +AF+ FD+D +G I+ EL H + +
Sbjct: 61 TIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEV 120
Query: 483 KEIIAEVDIDNDGRINYEEFAAMM 506
E+I E DID DG INYEEF MM
Sbjct: 121 DEMIREADIDGDGHINYEEFVRMM 144
|
| >d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 187 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 115 bits (288), Expect = 2e-30
Identities = 38/177 (21%), Positives = 70/177 (39%), Gaps = 19/177 (10%)
Query: 354 KLKKVALKVIAE--NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE- 410
KLK ++ + +E+E+ + F SG + + + ++
Sbjct: 4 KLKPEVVEELTRKTYFTEKEVQQWYKGFI--KDCPSGQLDAAGFQKIYKQFFPFGDPTKF 61
Query: 411 VRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHA 470
+ D + +G I++ EFI A +R +E L AF+ +D DN GYIT E+
Sbjct: 62 ATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDI 121
Query: 471 LKKYNMG-------------DAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGNPDMV 514
+ K + I A +D + DG++ +EF + +P +V
Sbjct: 122 VDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKA-DPSIV 177
|
| >d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 162 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 112 bits (281), Expect = 6e-30
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 5/145 (3%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
LSEE I K F D D G I+ +EL + LG ++ E+ ++E D DG+GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 427 DYIEFITATMHMN----RVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDA-KT 481
D+ EF+ + + + EE L F FDK+ G+I +EEL L+ +
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 482 IKEIIAEVDIDNDGRINYEEFAAMM 506
I++++ + D +NDGRI+++EF MM
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMM 158
|
| >d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} Length = 189 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Guanylate cyclase activating protein 2, GCAP-2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 113 bits (284), Expect = 6e-30
Identities = 36/169 (21%), Positives = 68/169 (40%), Gaps = 20/169 (11%)
Query: 365 ENLSEEEIMGLKEMFKSMDTD-NSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
+ + L+E +K + SGT+ E K + V + A D +G+
Sbjct: 13 GAVGAADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGD 72
Query: 424 GTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY--------- 474
TID++E++ A + R E L F+ +DKD +G I +EL ++
Sbjct: 73 NTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSV 132
Query: 475 ---------NMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGNPDMV 514
+ + + I VD + DG+++ EF R+ + ++
Sbjct: 133 EVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARR-DKWVM 180
|
| >d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 156 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 112 bits (280), Expect = 9e-30
Identities = 48/153 (31%), Positives = 80/153 (52%), Gaps = 6/153 (3%)
Query: 361 KVIAENLSEEEIMGLKEMFKSMDTD-NSGTITFEELKAGLPKLGTRLSESEVRQLMEAAD 419
K E L+EE+ K F G+I+ +EL + LG + E++++++ D
Sbjct: 2 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 61
Query: 420 VDGNGTIDYIEFITATMHMNRVER----EEHLYKAFEYFDKDNSGYITMEELEHALKKYN 475
DG+GT+D+ EF+ + + + EE L F FDK+ GYI +EEL+ L+
Sbjct: 62 EDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATG 121
Query: 476 MG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507
I+E++ + D +NDGRI+Y+EF M+
Sbjct: 122 ETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 154
|
| >d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 182 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Score = 112 bits (280), Expect = 2e-29
Identities = 93/155 (60%), Positives = 121/155 (78%), Gaps = 1/155 (0%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
AE LSEEEI GLKE+FK +DTDNSGTITF+ELK GL ++G+ L ESE++ LM+AAD+D +
Sbjct: 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS 60
Query: 424 GTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIK 483
GTIDY EFI AT+H+N++EREE+L AF YFDKD SGYIT++E++ A K + + D I
Sbjct: 61 GTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDD-IHID 119
Query: 484 EIIAEVDIDNDGRINYEEFAAMMRKGNPDMVGNRR 518
++I E+D DNDG+I+Y EFAAMMRK + RR
Sbjct: 120 DMIKEIDQDNDGQIDYGEFAAMMRKRKGNGGIGRR 154
|
| >d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} Length = 141 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Human (Homo sapiens) [TaxId: 9606]
Score = 108 bits (271), Expect = 1e-28
Identities = 43/140 (30%), Positives = 79/140 (56%), Gaps = 2/140 (1%)
Query: 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDY 428
EE+ ++E F D D +GTI +ELK + LG + E+++++ D +G G +++
Sbjct: 2 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNF 61
Query: 429 IEFITA-TMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEII 486
+F+T T M+ + +E + KAF+ FD D +G I+ + L+ K+ + ++E+I
Sbjct: 62 GDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMI 121
Query: 487 AEVDIDNDGRINYEEFAAMM 506
E D D DG ++ +EF +M
Sbjct: 122 DEADRDGDGEVSEQEFLRIM 141
|
| >d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 190 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 107 bits (268), Expect = 8e-28
Identities = 44/179 (24%), Positives = 69/179 (38%), Gaps = 19/179 (10%)
Query: 354 KLKKVALKVIAE--NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE- 410
KL K L + + EI + F + SG + E+ + S +
Sbjct: 7 KLSKDDLTCLKQSTYFDRREIQQWHKGF--LRDCPSGQLAREDFVKIYKQFFPFGSPEDF 64
Query: 411 VRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHA 470
L D D NG I + EFIT +R EE L AFE +D ++ GYIT +E+
Sbjct: 65 ANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTI 124
Query: 471 LKKYNMGDAKT-------------IKEIIAEVDIDNDGRINYEEFAAMMRKGNPDMVGN 516
+ +K+I +D + DG I +EF + +P ++G
Sbjct: 125 VASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKV-DPSIIGA 182
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 188 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Score = 106 bits (265), Expect = 3e-27
Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 16/151 (10%)
Query: 365 ENLSEEEIM-GLKEMFKSMDTDNSGTITFEELKAGLPKLGTR--------LSESEVRQLM 415
+ LSEEEI K +F + D+ I+ +EL+ L ++ ++ S R ++
Sbjct: 11 KVLSEEEIDDNFKTLFSKLAGDD-MEISVKELQTILNRIISKHKDLRTNGFSLESCRSMV 69
Query: 416 EAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYN 475
D DGNG + +EF + + F FD D SG ++ E+ A++
Sbjct: 70 NLMDRDGNGKLGLVEFNILWNRIR------NYLTIFRKFDLDKSGSMSAYEMRMAIEAAG 123
Query: 476 MGDAKTIKEIIAEVDIDNDGRINYEEFAAMM 506
+ ++I D++ I+++ F +
Sbjct: 124 FKLPCQLHQVIVARFADDELIIDFDNFVRCL 154
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 188 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Score = 72.1 bits (176), Expect = 2e-15
Identities = 22/96 (22%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFI 432
+F+ D D SG+++ E++ + G +L ++ Q++ A D ID+ F+
Sbjct: 93 RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPC-QLHQVIVARFADDELIIDFDNFV 151
Query: 433 TATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELE 468
+ + E L+K F+ D +N+G I ++ +
Sbjct: 152 RCLVRL------EILFKIFKQLDPENTGTIQLDLIS 181
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 188 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Score = 45.5 bits (107), Expect = 3e-06
Identities = 13/81 (16%), Positives = 34/81 (41%), Gaps = 10/81 (12%)
Query: 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKK---------YNMGDAKTIKEIIAEVDID 492
E +++ F D+ I+++EL+ L + N ++ + ++ +D D
Sbjct: 17 EIDDNFKTLFSKLAGDD-MEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRD 75
Query: 493 NDGRINYEEFAAMMRKGNPDM 513
+G++ EF + + +
Sbjct: 76 GNGKLGLVEFNILWNRIRNYL 96
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Score = 100 bits (250), Expect = 4e-26
Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 8/107 (7%)
Query: 406 LSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITME 465
L ++++ ++A V G+ ++ +F + K F+ D D SG+I E
Sbjct: 6 LKADDIKKALDA--VKAEGSFNHKKFFALVGLKAM--SANDVKKVFKAIDADASGFIEEE 61
Query: 466 ELEHALKKYNMG----DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508
EL+ LK + K + D D DG+I +EF ++ +
Sbjct: 62 ELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVHE 108
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Score = 63.8 bits (155), Expect = 4e-13
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKL---GTRLSESEVRQLMEAADVDGNGTIDYIEF 431
+K++FK++D D SG I EELK L G L+++E + ++AAD DG+G I EF
Sbjct: 43 VKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEF 102
Query: 432 IT 433
T
Sbjct: 103 ET 104
|
| >d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 183 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin B-like protein 2 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 101 bits (252), Expect = 1e-25
Identities = 35/163 (21%), Positives = 72/163 (44%), Gaps = 14/163 (8%)
Query: 366 NLSEEEIMGLKEMFKSMDTD--NSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
S EI L E+FK + + + G I EE + L K + S ++ + D N
Sbjct: 10 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESL-FADRVFDLFDTKHN 68
Query: 424 GTIDYIEFITAT-MHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHAL---------KK 473
G + + EF A + ++ ++ +F+ +D G+I +E++ +
Sbjct: 69 GILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNL 128
Query: 474 YNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGNPDMVGN 516
+ I + E D +DG+I+ EE+ +++ + +P ++ N
Sbjct: 129 KDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLR-HPSLLKN 170
|
| >d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 183 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin B-like protein 2 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 50.7 bits (120), Expect = 5e-08
Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Query: 429 IEFITATMHMNRVEREEHLYKAFEYFDKD--NSGYITMEELEHALKKYNMGDAKTIKEII 486
E + + E E LY+ F+ + G I EE + AL K N ++ +
Sbjct: 2 PELLARDTVFSVSEIEA-LYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVF 60
Query: 487 AEVDIDNDGRINYEEFAAMMRKGNPDM 513
D ++G + +EEFA + +P+
Sbjct: 61 DLFDTKHNGILGFEEFARALSVFHPNA 87
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} Length = 186 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Score = 100 bits (249), Expect = 3e-25
Identities = 28/161 (17%), Positives = 63/161 (39%), Gaps = 16/161 (9%)
Query: 357 KVALKVIAENLSEEEIM-GLKEMFKSMDTDNSGTITFEELKAGLPKLG--------TRLS 407
++ + +EE+I G + +F + I+ EL+ L ++ S
Sbjct: 1 EIEANIEEIEANEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFS 59
Query: 408 ESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEEL 467
+ +++ D DG+G + EF + + K + D D SG + E+
Sbjct: 60 IETCKIMVDMLDEDGSGKLGLKEFYILWTKI------QKYQKIYREIDVDRSGTMNSYEM 113
Query: 468 EHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508
AL++ + ++I D++ I+++ F + +
Sbjct: 114 RKALEEAGFKLPCQLHQVIVARFADDELIIDFDNFVRCLVR 154
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} Length = 186 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Score = 64.8 bits (157), Expect = 8e-13
Identities = 23/93 (24%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 376 KEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITAT 435
+++++ +D D SGT+ E++ L + G +L ++ Q++ A D ID+ F+
Sbjct: 94 QKIYREIDVDRSGTMNSYEMRKALEEAGFKLPC-QLHQVIVARFADDELIIDFDNFVRCL 152
Query: 436 MHMNRVEREEHLYKAFEYFDKDNSGYITMEELE 468
+ + E L+K F+ D +N+G I ++ +
Sbjct: 153 VRL------EILFKIFKQLDPENTGTIQLDLIS 179
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} Length = 186 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Score = 49.0 bits (116), Expect = 2e-07
Identities = 16/94 (17%), Positives = 32/94 (34%), Gaps = 10/94 (10%)
Query: 429 IEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDA--------- 479
IE + N + + + F I+ EL+ L++
Sbjct: 2 IEANIEEIEANEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSI 60
Query: 480 KTIKEIIAEVDIDNDGRINYEEFAAMMRKGNPDM 513
+T K ++ +D D G++ +EF + K
Sbjct: 61 ETCKIMVDMLDEDGSGKLGLKEFYILWTKIQKYQ 94
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} Length = 186 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Score = 36.7 bits (84), Expect = 0.003
Identities = 11/79 (13%), Positives = 31/79 (39%), Gaps = 8/79 (10%)
Query: 360 LKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAAD 419
++ E + L ++ + D+ I F+ L +L + ++ + D
Sbjct: 113 MRKALEEAGFKLPCQLHQVIVARFADDELIIDFDNFVRCLVRL------EILFKIFKQLD 166
Query: 420 VDGNG--TIDYIEFITATM 436
+ G +D I +++ ++
Sbjct: 167 PENTGTIQLDLISWLSFSV 185
|
| >d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 178 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Kchip1, Kv4 potassium channel-interacting protein species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 99.9 bits (248), Expect = 5e-25
Identities = 34/163 (20%), Positives = 62/163 (38%), Gaps = 17/163 (10%)
Query: 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE-VRQLMEAADVDGNG 424
N ++ E+ L FK + SG + E K + S L A D G
Sbjct: 9 NFTKRELQVLYRGFK--NECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTG 66
Query: 425 TIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT--- 481
++ + +F+TA + R E L F +D + GYI EE+ +K K
Sbjct: 67 SVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYP 126
Query: 482 ----------IKEIIAEVDIDNDGRINYEEFAAMMRKGNPDMV 514
+ ++D + DG + +EF ++ + +++
Sbjct: 127 VLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQE-DDNIM 168
|
| >d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} Length = 174 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Sandworm (Nereis diversicolor) [TaxId: 126592]
Score = 97.8 bits (242), Expect = 2e-24
Identities = 28/168 (16%), Positives = 48/168 (28%), Gaps = 20/168 (11%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVR-----------QLME 416
S+ + +K F +D D G IT + ++ +
Sbjct: 1 SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNF 60
Query: 417 AADVDGNGTIDYIEFITATMHMNRVEREEH-----LYKAFEYFDKDNSGYITMEELEHAL 471
V G ID FI + M + + L F D + I+ +E
Sbjct: 61 LTAVAGGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFF 120
Query: 472 KKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK---GNPDMVGN 516
+ +D +NDG ++ EEF + D
Sbjct: 121 GMLGLDK-TMAPASFDAIDTNNDGLLSLEEFVIAGSDFFMNDGDSTNK 167
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Score = 95.4 bits (237), Expect = 2e-24
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 8/107 (7%)
Query: 406 LSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITME 465
L ++ + + A GT DY F + + + + + + FE DKD SG+I E
Sbjct: 6 LKADDINKAISA--FKDPGTFDYKRFFH--LVGLKGKTDAQVKEVFEILDKDQSGFIEEE 61
Query: 466 ELEHALKKYNMG----DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508
EL+ LK ++ + K ++A D D+DG+I +EFA M+ +
Sbjct: 62 ELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQ 108
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Score = 61.5 bits (149), Expect = 2e-12
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL---GTRLSESEVRQLMEAADVDGNG 424
++ + +KE+F+ +D D SG I EELK L G L+++E + L+ A D D +G
Sbjct: 39 TDAQ---VKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDG 95
Query: 425 TIDYIEFIT 433
I EF
Sbjct: 96 KIGADEFAK 104
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Score = 95.4 bits (237), Expect = 3e-24
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 406 LSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITME 465
L +++V + A + + EF + + + + KAF D+D SG+I +
Sbjct: 5 LKDADVAAALAACSAAD--SFKHKEFFAKVGLAS--KSLDDVKKAFYVIDQDKSGFIEED 60
Query: 466 ELEHALKKYNMGDAK----TIKEIIAEVDIDNDGRINYEEFAAMMR 507
EL+ L+ ++ K +A+ D D DG I +EFAAM++
Sbjct: 61 ELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK 106
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Score = 60.0 bits (145), Expect = 6e-12
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL---GTRLSESEVRQLMEAADVDGN 423
L+ + + +K+ F +D D SG I +ELK L L+++E + + D DG+
Sbjct: 34 LASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGD 93
Query: 424 GTIDYIEFIT 433
G I EF
Sbjct: 94 GMIGVDEFAA 103
|
| >d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} Length = 176 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calerythrin species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 95.5 bits (236), Expect = 1e-23
Identities = 27/166 (16%), Positives = 55/166 (33%), Gaps = 27/166 (16%)
Query: 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRL---------------SESE 410
++ + LK+ F D D +G + + + +
Sbjct: 3 AIASDR---LKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGL 59
Query: 411 VRQLMEAADVDGNGTIDYIEFITATMHMNRVER--------EEHLYKAFEYFDKDNSGYI 462
L + A V +G++ +FI T ++ + + DK+ G I
Sbjct: 60 FDYLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQI 119
Query: 463 TMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508
+E L M A+ E +VD + +G ++ +E +R
Sbjct: 120 NADEFAAWLTALGMSKAE-AAEAFNQVDTNGNGELSLDELLTAVRD 164
|
| >d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} Length = 176 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calerythrin species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 48.5 bits (114), Expect = 2e-07
Identities = 12/88 (13%), Positives = 26/88 (29%), Gaps = 16/88 (18%)
Query: 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYN----------------MGDAKTIKEI 485
+ L K F+ +D D +G + + E + +
Sbjct: 4 IASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYL 63
Query: 486 IAEVDIDNDGRINYEEFAAMMRKGNPDM 513
E + +DG + E+F + +
Sbjct: 64 AKEAGVGSDGSLTEEQFIRVTENLIFEQ 91
|
| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} Length = 187 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
Score = 95.4 bits (236), Expect = 2e-23
Identities = 30/164 (18%), Positives = 61/164 (37%), Gaps = 22/164 (13%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTR-----LSESEVRQLMEAADVD 421
+ I K MF +D +++G I+ +E+ + +++ + A
Sbjct: 6 DNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFG 65
Query: 422 GNGT-----IDYIEFITATMHMNRVEREEH-----------LYKAFEYFDKDNSGYITME 465
G G D+ +I + E E++ F+ DKD +G IT++
Sbjct: 66 GAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLD 125
Query: 466 ELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508
E + K + ++ +E DID G+++ +E
Sbjct: 126 EWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHLG 169
|
| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} Length = 187 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
Score = 54.2 bits (129), Expect = 3e-09
Identities = 31/157 (19%), Positives = 50/157 (31%), Gaps = 11/157 (7%)
Query: 276 SIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASD 335
+ D G I + A DIV L A P++ + + +
Sbjct: 19 NFLDVNHNGKISLD-----EMVYKASDIVINNLGATPEQ-----AKRHKDAVEAFFGGAG 68
Query: 336 KPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEEL 395
KL L+ A+N + +F +D D +G IT +E
Sbjct: 69 MKYG-VETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEW 127
Query: 396 KAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFI 432
KA G S + + D+D +G +D E
Sbjct: 128 KAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMT 164
|
| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} Length = 187 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
Score = 46.1 bits (108), Expect = 2e-06
Identities = 22/136 (16%), Positives = 41/136 (30%), Gaps = 13/136 (9%)
Query: 352 MNKLKKVALKVIAENLSEEEI--MGLKEMFKSMDTDNSGTITFEELKAGLPKLGT----- 404
+ K + + + + + ++ F + G KL T
Sbjct: 35 VYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKKLATDELEK 94
Query: 405 ------RLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDN 458
L L + D D NG I E+ T ++ E + F D D
Sbjct: 95 YAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDE 154
Query: 459 SGYITMEELEHALKKY 474
SG + ++E+ +
Sbjct: 155 SGQLDVDEMTRQHLGF 170
|
| >d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} Length = 139 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Human (Homo sapiens) [TaxId: 9606]
Score = 93.9 bits (232), Expect = 2e-23
Identities = 30/137 (21%), Positives = 52/137 (37%), Gaps = 5/137 (3%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGT-----IDYI 429
KE F+ D G I + + + LG + +EV +++ D + ++
Sbjct: 2 FKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFL 61
Query: 430 EFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEV 489
+ A E + F FDK+ +G + EL H L + E +
Sbjct: 62 PMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAG 121
Query: 490 DIDNDGRINYEEFAAMM 506
D++G INYE F +
Sbjct: 122 HEDSNGCINYEAFLKHI 138
|
| >d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} Length = 139 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.8 bits (128), Expect = 2e-09
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDY 428
+ E F+ D + +G + EL+ L LG +++E EV ++ D NG I+Y
Sbjct: 73 QGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLA-GHEDSNGCINY 131
Query: 429 IEFITATM 436
F+ +
Sbjct: 132 EAFLKHIL 139
|
| >d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Score = 91.6 bits (227), Expect = 3e-23
Identities = 52/77 (67%), Positives = 65/77 (84%)
Query: 361 KVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADV 420
K +AE LSEEEI GLKE+FK +DTDNSGTITF+ELK GL ++G+ L ESE++ LM+AAD+
Sbjct: 11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADI 70
Query: 421 DGNGTIDYIEFITATMH 437
D +GTIDY EFI AT+H
Sbjct: 71 DKSGTIDYGEFIAATVH 87
|
| >d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Score = 68.4 bits (167), Expect = 4e-15
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 422 GNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT 481
+G ID + A ++ E L + F+ D DNSG IT +EL+ LK+ ++
Sbjct: 2 SSGHIDDDDKHMAE-RLSEEEIGG-LKELFKMIDTDNSGTITFDELKDGLKRVGSELMES 59
Query: 482 -IKEIIAEVDIDNDGRINYEEFAAMM 506
IK+++ DID G I+Y EF A
Sbjct: 60 EIKDLMDAADIDKSGTIDYGEFIAAT 85
|
| >d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Score = 49.2 bits (117), Expect = 2e-08
Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 8/84 (9%)
Query: 386 NSGTITFEELKAGLPKLGTRLSESEVRQLMEA---ADVDGNGTIDYIEFITATMHMNRVE 442
+SG I ++ + RLSE E+ L E D D +GTI + E +
Sbjct: 2 SSGHIDDDD-----KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSEL 56
Query: 443 REEHLYKAFEYFDKDNSGYITMEE 466
E + + D D SG I E
Sbjct: 57 MESEIKDLMDAADIDKSGTIDYGE 80
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 108 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 90.8 bits (225), Expect = 1e-22
Identities = 23/106 (21%), Positives = 47/106 (44%), Gaps = 8/106 (7%)
Query: 406 LSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITME 465
LS ++ ++ + T + +F +++ + F + D D SGY+ +
Sbjct: 6 LSAEDIAAALQ--ECQDPDTFEPQKFFQT-SGLSK-MSASQVKDIFRFIDNDQSGYLDGD 61
Query: 466 ELEHALKKYNMGDAK----TIKEIIAEVDIDNDGRINYEEFAAMMR 507
EL++ L+K+ + K ++ D D DG+I +EF M+
Sbjct: 62 ELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMVH 107
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 108 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 65.7 bits (160), Expect = 7e-14
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL---GTRLSESEVRQLMEAADVDGN 423
LS+ +K++F+ +D D SG + +ELK L K L+ESE + LM+AAD DG+
Sbjct: 35 LSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGD 94
Query: 424 GTIDYIEFI 432
G I EF
Sbjct: 95 GKIGADEFQ 103
|
| >d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} Length = 180 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium- and integrin-binding protein, CIB species: Human (Homo sapiens) [TaxId: 9606]
Score = 92.5 bits (229), Expect = 2e-22
Identities = 29/165 (17%), Positives = 60/165 (36%), Gaps = 17/165 (10%)
Query: 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE----VRQLMEAADVD 421
L+++EI+ F + ++ + L E + ++
Sbjct: 10 FLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKANPFKERICRVFSTS 69
Query: 422 -GNGTIDYIEFITA-TMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKK------ 473
++ + +F+ ++ + + + AF FD D+ G + E+L +
Sbjct: 70 PAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGE 129
Query: 474 ----YNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGNPDMV 514
+ I I+ E DID DG IN EF ++ + +PD
Sbjct: 130 DTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISR-SPDFA 173
|
| >d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 185 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Score = 92.4 bits (228), Expect = 2e-22
Identities = 19/173 (10%), Positives = 54/173 (31%), Gaps = 28/173 (16%)
Query: 367 LSEEEIMGLKEMFKSM-DTDNSGTITFEELKAGLPKLGTRLS---------------ESE 410
L++ + +K F D ++ G+I + + + + E E
Sbjct: 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDE 61
Query: 411 VRQLMEAADVDGNGTIDY---------IEFITATMHMNRVEREEHLYKAFEYFDKDNSGY 461
R L AD++ + + + ++ + + F+ D G
Sbjct: 62 WRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGI 121
Query: 462 ITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK--GNPD 512
+ +EE ++ K + + + + + + + + + +P
Sbjct: 122 VDLEEFQNYCKNFQLQC-ADVPAVYNVITDGGKVTFDLNRYKELYYRLLTSPA 173
|
| >d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 185 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Score = 45.4 bits (106), Expect = 3e-06
Identities = 13/70 (18%), Positives = 22/70 (31%), Gaps = 2/70 (2%)
Query: 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNG 424
+L + +FK MD G + EE + L ++V + G
Sbjct: 97 ADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ--LQCADVPAVYNVITDGGKV 154
Query: 425 TIDYIEFITA 434
T D +
Sbjct: 155 TFDLNRYKEL 164
|
| >d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} Length = 201 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Recoverin species: Cow (Bos taurus) [TaxId: 9913]
Score = 93.0 bits (230), Expect = 2e-22
Identities = 33/182 (18%), Positives = 67/182 (36%), Gaps = 21/182 (11%)
Query: 351 AMNKLKKVALKVIAE--NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSE 408
L K L+ + +EEE+ + F SG IT +E + K
Sbjct: 4 KSGALSKEILEELQLNTKFTEEELSSWYQSFL--KECPSGRITRQEFQTIYSKFFPEADP 61
Query: 409 SE-VRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEEL 467
+ + + D + +GT+D+ E++ A + + + L AF +D D +G I+ E+
Sbjct: 62 KAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEV 121
Query: 468 EHAL---------------KKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGNPD 512
+ + K ++I +D ++ +EF N +
Sbjct: 122 LEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGTLA-NKE 180
Query: 513 MV 514
++
Sbjct: 181 IL 182
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Score = 89.7 bits (222), Expect = 2e-22
Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 8/111 (7%)
Query: 402 LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGY 461
+ LS ++++ + A + D+ +F + + + + + + K F DKD SG+
Sbjct: 2 MTDLLSAEDIKKAIGA--FTAADSFDHKKFFQM-VGLKK-KSADDVKKVFHILDKDKSGF 57
Query: 462 ITMEELEHALKKYNMGDAK----TIKEIIAEVDIDNDGRINYEEFAAMMRK 508
I +EL LK ++ K ++A D D DG+I EEF+ ++ +
Sbjct: 58 IEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE 108
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Score = 60.8 bits (147), Expect = 3e-12
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLG---TRLSESEVRQLMEAADVDG 422
L ++ +K++F +D D SG I +EL + L LS E + LM A D DG
Sbjct: 34 GLKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDG 93
Query: 423 NGTIDYIEFIT 433
+G I EF T
Sbjct: 94 DGKIGVEEFST 104
|
| >d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} Length = 189 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]
Score = 91.6 bits (226), Expect = 4e-22
Identities = 34/171 (19%), Positives = 65/171 (38%), Gaps = 22/171 (12%)
Query: 360 LKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAG-----LPKLGTRLSESEVRQL 414
+K+ + + I K MF +D + +G IT +E+ + KL +++ Q+
Sbjct: 1 VKLKTDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQV 60
Query: 415 MEAAD-----VDGNGTIDYIEFITATMHMNRVER-----------EEHLYKAFEYFDKDN 458
A ++ I + +F+ + E E F+ FDKD
Sbjct: 61 CVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDG 120
Query: 459 SGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508
SG IT++E + K + + + D+DN G ++ +E
Sbjct: 121 SGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHLG 171
|
| >d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} Length = 189 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]
Score = 51.9 bits (123), Expect = 2e-08
Identities = 33/161 (20%), Positives = 50/161 (31%), Gaps = 11/161 (6%)
Query: 276 SIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASD 335
D G I I S A D + L A P++ + + +
Sbjct: 21 DFLDINGNGKITLD-----EIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGK 75
Query: 336 KPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEEL 395
+ + + +L LK A N +F D D SGTIT +E
Sbjct: 76 E------IAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEW 129
Query: 396 KAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436
KA G S+ + D+D G +D E +
Sbjct: 130 KAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHL 170
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 89.7 bits (222), Expect = 1e-21
Identities = 29/140 (20%), Positives = 53/140 (37%), Gaps = 15/140 (10%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLG-----TRLSESEVRQLMEAADVDGNGTIDYI 429
+ F ++ G + EEL+ L + G + S R ++ D D G + +
Sbjct: 2 VYTYFSAVA-GQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFN 60
Query: 430 EFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAE 488
F +N + F D+D SG + EL A+ +T+ I+
Sbjct: 61 AFKELWAALN------AWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKR 114
Query: 489 VDIDNDGRINYEEFAAMMRK 508
+GRI ++++ A K
Sbjct: 115 Y--SKNGRIFFDDYVACCVK 132
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.6 bits (170), Expect = 9e-15
Identities = 19/91 (20%), Positives = 36/91 (39%), Gaps = 8/91 (8%)
Query: 378 MFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437
F ++D D SGT+ EL+ + +G RLS + +++ NG I + +++ +
Sbjct: 75 NFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVK--RYSKNGRIFFDDYVACCVK 132
Query: 438 MNRVEREEHLYKAFEYFDKDNSGYITMEELE 468
+ L F D G +
Sbjct: 133 L------RALTDFFRKRDHLQQGSANFIYDD 157
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.4 bits (146), Expect = 2e-11
Identities = 26/154 (16%), Positives = 53/154 (34%), Gaps = 18/154 (11%)
Query: 355 LKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQL 414
L + + S E + M +D D++G + F K + + ++
Sbjct: 25 LTQSGINGTYSPFSLETC---RIMIAMLDRDHTGKMGFNAFK------ELWAALNAWKEN 75
Query: 415 MEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY 474
D DG+GT+++ E A M + L + + K+ G I ++ K
Sbjct: 76 FMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKN--GRIFFDDYVACCVK- 132
Query: 475 NMGDAKTIKEIIAEVDIDNDGRI--NYEEFAAMM 506
+ + + + D G Y++F
Sbjct: 133 ----LRALTDFFRKRDHLQQGSANFIYDDFLQGT 162
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.8 bits (116), Expect = 2e-07
Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 8/71 (11%)
Query: 451 FEYFDK--DNSGYITMEELEHALKKYNMGDAK------TIKEIIAEVDIDNDGRINYEEF 502
+ YF G + EEL+ L + + T + +IA +D D+ G++ + F
Sbjct: 3 YTYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAF 62
Query: 503 AAMMRKGNPDM 513
+ N
Sbjct: 63 KELWAALNAWK 73
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.8 bits (95), Expect = 1e-04
Identities = 16/84 (19%), Positives = 30/84 (35%), Gaps = 13/84 (15%)
Query: 357 KVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLME 416
+ A+ ++ LS + + + K + G I F++ A KL +
Sbjct: 93 RQAIGLMGYRLSPQTL---TTIVKRYSKN--GRIFFDDYVACCVKLRA------LTDFFR 141
Query: 417 AADVDGNG--TIDYIEFITATMHM 438
D G Y +F+ TM +
Sbjct: 142 KRDHLQQGSANFIYDDFLQGTMAI 165
|
| >d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} Length = 172 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Sorcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 88.6 bits (219), Expect = 3e-21
Identities = 32/147 (21%), Positives = 57/147 (38%), Gaps = 13/147 (8%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLG-----TRLSESEVRQLMEAADVD 421
+ L F ++ G I +EL+ L + G + R ++ D D
Sbjct: 1 FPGQTQDPLYGYFAAVA-GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRD 59
Query: 422 GNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT 481
+GT+ + EF +N + F FD D SG + +EL+ AL +
Sbjct: 60 MSGTMGFNEFKELWAVLN------GWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQ 113
Query: 482 IKEIIAEVDIDNDGRINYEEFAAMMRK 508
IA+ +G+I ++++ A K
Sbjct: 114 AVNSIAK-RYSTNGKITFDDYIACCVK 139
|
| >d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} Length = 172 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Sorcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.8 bits (144), Expect = 3e-11
Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 8/92 (8%)
Query: 377 EMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436
+ F S DTD SGT+ +EL+ L +G RLS V + + NG I + ++I +
Sbjct: 81 QHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAK--RYSTNGKITFDDYIACCV 138
Query: 437 HMNRVEREEHLYKAFEYFDKDNSGYITMEELE 468
+ L +F D G + +
Sbjct: 139 KL------RALTDSFRRRDTAQQGVVNFPYDD 164
|
| >d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} Length = 172 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Sorcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.2 bits (114), Expect = 3e-07
Identities = 15/83 (18%), Positives = 32/83 (38%), Gaps = 7/83 (8%)
Query: 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG------DAKTIKEIIAEVDIDNDG 495
+ ++ LY F G I +EL+ L + + + +T + +++ +D D G
Sbjct: 4 QTQDPLYGYFAAVA-GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSG 62
Query: 496 RINYEEFAAMMRKGNPDMVGNRR 518
+ + EF + N
Sbjct: 63 TMGFNEFKELWAVLNGWRQHFIS 85
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 88.3 bits (218), Expect = 6e-21
Identities = 37/201 (18%), Positives = 69/201 (34%), Gaps = 25/201 (12%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACK-----SISSRKLINRDDVEDVR-REVQIMHHLT 125
G+ +G G+ + + + K S +K+ + D D+ + I
Sbjct: 5 GKLMGEGKESAVFNCYSEKF-GECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARN 63
Query: 126 GHRNIVELKGAYEDRH----SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVV 181
R + +L+G + ++M+L EL+ + ++ V
Sbjct: 64 EFRALQKLQGLAVPKVYAWEGNAVLMELIDAKELY-------RVRVENPDEVLDMILEEV 116
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV 241
+ G++H DL N L S + + DF SV +++++
Sbjct: 117 AKFYHRGIVHGDLSQYNVLVS----EEGIWIIDFPQSVEVGEEG-WREILERDVRNIITY 171
Query: 242 LRRNYGAEADIWSAGVILYIL 262
R Y E DI S I IL
Sbjct: 172 FSRTYRTEKDINS--AIDRIL 190
|
| >d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 142 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Score = 83.5 bits (205), Expect = 9e-20
Identities = 28/146 (19%), Positives = 67/146 (45%), Gaps = 7/146 (4%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
L +++I +KE F +D D G ++ E++KA +LG + E+ +++ + G +
Sbjct: 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPL 56
Query: 427 DYIEFITATMHMNRVEREEHLYKA-FEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKE 484
++ F++ E + F FD+ + + +E ++ L+ + ++
Sbjct: 57 NFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRM 116
Query: 485 IIAEVDIDNDGRINYEEFAAMMRKGN 510
E ++ G+ +Y +F AM++
Sbjct: 117 TFKEAPVE-GGKFDYVKFTAMIKGSG 141
|
| >d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]} Length = 165 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin regulatory subunit (B-chain) species: Human (Homo sapiens) [TaxId: 9606]
Score = 83.2 bits (204), Expect = 2e-19
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 11/155 (7%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+ + +EI L + FK +D DNSG+++ EE + V+++++ D DG
Sbjct: 6 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPEL----QQNPLVQRVIDIFDTDG 61
Query: 423 NGTIDYIEFITATMHMNR-VEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAK- 480
NG +D+ EFI + ++E+ L AF +D D GYI+ EL LK + K
Sbjct: 62 NGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKD 121
Query: 481 -----TIKEIIAEVDIDNDGRINYEEFAAMMRKGN 510
+ + I D D DGRI++EEF A++ +
Sbjct: 122 TQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLD 156
|
| >d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 152 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Score = 82.0 bits (201), Expect = 4e-19
Identities = 33/149 (22%), Positives = 59/149 (39%), Gaps = 6/149 (4%)
Query: 367 LSEEEIMGLKEMFKSMDT--DNSGTITFEELKAGLPKLGTRLSESEVRQLM-EAADVDGN 423
LS++EI LK++F+ D G + +L LG +V + + +
Sbjct: 1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKS 60
Query: 424 GTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTI 482
+ + +AF+ FD++ G+I+ EL H L + +
Sbjct: 61 LPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDV 120
Query: 483 KEIIAEVDI--DNDGRINYEEFAAMMRKG 509
EII D+ D +G + YE+F + G
Sbjct: 121 DEIIKLTDLQEDLEGNVKYEDFVKKVMAG 149
|
| >d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 152 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Score = 35.8 bits (81), Expect = 0.004
Identities = 10/74 (13%), Positives = 20/74 (27%), Gaps = 2/74 (2%)
Query: 442 EREEHLYKAFEYFD--KDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINY 499
+ + L FE FD G + +L + + + + + +
Sbjct: 4 DEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKSLPF 63
Query: 500 EEFAAMMRKGNPDM 513
EEF
Sbjct: 64 EEFLPAYEGLMDCE 77
|
| >d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} Length = 173 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain small (regulatory) subunit (domain VI) species: Pig (Sus scrofa) [TaxId: 9823]
Score = 82.7 bits (203), Expect = 4e-19
Identities = 26/147 (17%), Positives = 52/147 (35%), Gaps = 15/147 (10%)
Query: 370 EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGT--------RLSESEVRQLMEAADVD 421
EE+ + +F + D+ ++ EL L K+ T R ++ D D
Sbjct: 1 EEVRQFRRLFAQLAGDD-MEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSD 59
Query: 422 GNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT 481
G + + + ++ FD D SG I EL A + +
Sbjct: 60 TTGKLGF------EEFKYLWNNIKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEH 113
Query: 482 IKEIIAEVDIDNDGRINYEEFAAMMRK 508
+ +I D G ++++ F + + +
Sbjct: 114 LYSMIIRRYSDEGGNMDFDNFISCLVR 140
|
| >d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} Length = 173 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain small (regulatory) subunit (domain VI) species: Pig (Sus scrofa) [TaxId: 9823]
Score = 64.9 bits (157), Expect = 6e-13
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 376 KEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITAT 435
+ ++K D D SGTI EL G L+E ++ D G +D+ FI+
Sbjct: 80 QAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYS-DEGGNMDFDNFISCL 138
Query: 436 MHMNRVEREEHLYKAFEYFDKDNSGYITMEELE 468
+ R + +++AF+ DKD +G I + E
Sbjct: 139 V------RLDAMFRAFKSLDKDGTGQIQVNIQE 165
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Score = 78.4 bits (193), Expect = 9e-19
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYE 500
+ E + KAF FD DNSG IT+++L K+ + ++E+IAE D ++D I+ +
Sbjct: 6 DSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDED 65
Query: 501 EFAAMMRKGN 510
EF +M+K +
Sbjct: 66 EFIRIMKKTS 75
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Score = 66.4 bits (162), Expect = 2e-14
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
S EE + + F+ D DNSGTIT ++L+ +LG L+E E+++++ AD + + ID
Sbjct: 7 SREE---ILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEID 63
Query: 428 YIEFIT 433
EFI
Sbjct: 64 EDEFIR 69
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Score = 52.2 bits (125), Expect = 2e-09
Identities = 17/74 (22%), Positives = 30/74 (40%)
Query: 403 GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYI 462
G R S E+ + D D +GTI + + EE L + D+++ I
Sbjct: 3 GERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEI 62
Query: 463 TMEELEHALKKYNM 476
+E +KK ++
Sbjct: 63 DEDEFIRIMKKTSL 76
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 68 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Score = 77.2 bits (190), Expect = 2e-18
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 444 EEHLYKAFEYFDKDNSGYITMEELEHALKK--YNMGDAKTIKEIIAEVDIDNDGRINYEE 501
EE + +AF+ FD + G I +E + ++K ++E + E D D +G I+ E
Sbjct: 1 EEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPE 60
Query: 502 FAAMMRK 508
F +++K
Sbjct: 61 FMDLIKK 67
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 68 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Score = 68.7 bits (168), Expect = 2e-15
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLG-TRLSESEVRQLMEAADVDGNGTID 427
EEE + FK D + G I F+E K + K+G L+++EV + M+ AD DGNG ID
Sbjct: 1 EEE---ILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVID 57
Query: 428 YIEFIT 433
EF+
Sbjct: 58 IPEFMD 63
|
| >d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Light Chain Mlc1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 79.4 bits (194), Expect = 3e-18
Identities = 30/143 (20%), Positives = 63/143 (44%), Gaps = 9/143 (6%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN-------GTID 427
K++F D G I + L L +G + V+ ++ A +
Sbjct: 4 NKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITG 63
Query: 428 YIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNM-GDAKTIKEII 486
IE + + E KAF+ FDK+++G +++ +L + L + E++
Sbjct: 64 LIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELL 123
Query: 487 AEVDIDNDGRINYEEF-AAMMRK 508
V++D++G I+Y++F ++R+
Sbjct: 124 KGVEVDSNGEIDYKKFIEDVLRQ 146
|
| >d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Light Chain Mlc1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 40.5 bits (93), Expect = 1e-04
Identities = 20/68 (29%), Positives = 40/68 (58%)
Query: 370 EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYI 429
+ + F+ D +++G ++ +L+ L LG +L+++EV +L++ +VD NG IDY
Sbjct: 78 AKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYK 137
Query: 430 EFITATMH 437
+FI +
Sbjct: 138 KFIEDVLR 145
|
| >d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} Length = 134 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: EHCABP species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]
Score = 78.6 bits (192), Expect = 4e-18
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 6/133 (4%)
Query: 377 EMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFIT--- 433
+FK +D + G +++EE+KA + K +E ++ + ++ D DGNG ID EF
Sbjct: 4 ALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG 63
Query: 434 ATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDN 493
+ + + + L ++ D D G +T EE+ KK+ + + E + + D +
Sbjct: 64 SIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEK---VAEQVMKADANG 120
Query: 494 DGRINYEEFAAMM 506
DG I EEF
Sbjct: 121 DGYITLEEFLEFS 133
|
| >d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} Length = 134 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: EHCABP species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]
Score = 36.6 bits (83), Expect = 0.002
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 378 MFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436
++K MD D G +T EE+ + K G +V + + AD +G+G I EF+ ++
Sbjct: 80 LYKLMDVDGDGKLTKEEVTSFFKKHG----IEKVAEQVMKADANGDGYITLEEFLEFSL 134
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 77 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 75.8 bits (186), Expect = 8e-18
Identities = 31/70 (44%), Positives = 42/70 (60%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
+ NL+EE+I KE F D DN+G+I+ EL + LG SE+EV LM DVDGN
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 60
Query: 424 GTIDYIEFIT 433
I++ EF+
Sbjct: 61 HQIEFSEFLA 70
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 77 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 63.9 bits (155), Expect = 1e-13
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYE 500
E+ +AF FDKDN+G I+ EL ++ + + +++ E+D+D + +I +
Sbjct: 7 EQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFS 66
Query: 501 EFAAMMRK 508
EF A+M +
Sbjct: 67 EFLALMSR 74
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Score = 74.6 bits (183), Expect = 2e-17
Identities = 20/67 (29%), Positives = 33/67 (49%)
Query: 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEE 501
+ + F+ FD + G I+ EL ALK ++ ++AE+D D DG I+++E
Sbjct: 3 QDIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDE 62
Query: 502 FAAMMRK 508
F R
Sbjct: 63 FTDFARA 69
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Score = 73.8 bits (181), Expect = 5e-17
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
+ ++I + +FK DT+ G I+ EL L L ++ EVR++M D DG+G I
Sbjct: 1 TPQDIADRERIFKRFDTNGDGKISSSELGDALKTL-GSVTPDEVRRMMAEIDTDGDGFIS 59
Query: 428 YIEFITATMHMNRVEREEHLYKAF 451
+ EF + + K F
Sbjct: 60 FDEFT--DFARANRGLVKDVSKIF 81
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Score = 48.0 bits (114), Expect = 5e-08
Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Query: 409 SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELE 468
++ ++ + D +G+G I E A + V +E + D D G+I+ +E
Sbjct: 6 ADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEV-RRMMAEIDTDGDGFISFDEFT 64
Query: 469 HALKKYNMGDAKTIKEI 485
+ N G K + +I
Sbjct: 65 DFARA-NRGLVKDVSKI 80
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Score = 80.8 bits (198), Expect = 2e-17
Identities = 42/261 (16%), Positives = 79/261 (30%), Gaps = 25/261 (9%)
Query: 272 ETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331
E Q D H + I+ ++ K+ D K + R
Sbjct: 22 EELQKKLDHTSFAHKEDRDRLEAQIAQKEQEQKAKLAEYDQKVQNEFDARERAEREREAA 81
Query: 332 DASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTIT 391
+ + +K + L+ LSEE+ L+++F S SG +
Sbjct: 82 RGDAAAEKQRLASLLKDLED-DASGYNRLRPSKPMLSEEDTNILRQLFLSSAVSGSGKFS 140
Query: 392 FEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN--------RVER 443
F++LK L K + E +++L + D G + YI + +
Sbjct: 141 FQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDLAALVADFRKIDTN 200
Query: 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEII----------------A 487
E+ + + ++ AL +Y D A
Sbjct: 201 SNGTLSRKEFREHFVRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLLVLRILYA 260
Query: 488 EVDIDNDGRINYEEFAAMMRK 508
D D G+++ EE ++
Sbjct: 261 FADFDKSGQLSKEEVQKVLED 281
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Score = 72.4 bits (176), Expect = 2e-14
Identities = 16/83 (19%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 426 IDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDA--KTIK 483
D + + + +++ L + + D D SG ++ EE++ L+ ++ ++ K +
Sbjct: 234 EDESDDVGFSEYVHLGLCLLVLRILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFE 293
Query: 484 EIIAEVDIDNDGRINYEEFAAMM 506
+ VD+D+ ++Y+EF ++
Sbjct: 294 HQFSVVDVDDSKSLSYQEFVMLV 316
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Score = 58.1 bits (139), Expect = 7e-10
Identities = 14/63 (22%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Query: 377 EMFKSMDTDNSGTITFEELKAGLPKLG-TRLSESEVRQLMEAADVDGNGTIDYIEFITAT 435
++ D D SG ++ EE++ L + + DVD + ++ Y EF+
Sbjct: 257 ILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLV 316
Query: 436 MHM 438
+ M
Sbjct: 317 LLM 319
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Score = 37.3 bits (85), Expect = 0.003
Identities = 7/45 (15%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Query: 353 NKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKA 397
+++KV + ++ + F +D D+S +++++E
Sbjct: 273 EEVQKVLEDAHIPESARKKF---EHQFSVVDVDDSKSLSYQEFVM 314
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 73.4 bits (180), Expect = 5e-17
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEF 502
EE L F FDK+ G+I +EEL L+ + I++++ + D +NDGRI+++EF
Sbjct: 8 EEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEF 67
Query: 503 AAMMR 507
MM
Sbjct: 68 LKMME 72
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 62.2 bits (151), Expect = 4e-13
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
A+ SEEE L F+ D + G I EEL L G + E ++ LM+ +D + +
Sbjct: 3 AKGKSEEE---LANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNND 59
Query: 424 GTIDYIEFIT 433
G ID+ EF+
Sbjct: 60 GRIDFDEFLK 69
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 46.5 bits (110), Expect = 2e-07
Identities = 16/60 (26%), Positives = 23/60 (38%)
Query: 407 SESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEE 466
SE E+ D + +G ID E EE + + DK+N G I +E
Sbjct: 7 SEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDE 66
|
| >d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 140 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Cdc4p species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 75.1 bits (183), Expect = 9e-17
Identities = 28/132 (21%), Positives = 54/132 (40%), Gaps = 3/132 (2%)
Query: 376 KEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITAT 435
K+ F D +G I + L G + +E+ ++ + + +++ +
Sbjct: 8 KQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAEVD-MEQFLQVLNRP 66
Query: 436 MHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT-IKEIIAEVDIDND 494
+ E K F+ FDKD +G I + EL + L + + E++ V D
Sbjct: 67 NGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVP-VKD 125
Query: 495 GRINYEEFAAMM 506
G +NY +F M+
Sbjct: 126 GMVNYHDFVQMI 137
|
| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} Length = 98 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a13 [TaxId: 9606]
Score = 73.0 bits (179), Expect = 1e-16
Identities = 10/81 (12%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 434 ATMHMNRVERE-EHLYKAF-EYFDKD-NSGYITMEELEHALKK---YNMGDAKTIKEIIA 487
A + +E E + F + ++ +++ E + + + + + D ++ E +
Sbjct: 2 AAEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMK 61
Query: 488 EVDIDNDGRINYEEFAAMMRK 508
+D++ D + + E+ ++ +
Sbjct: 62 SLDVNQDSELKFNEYWRLIGE 82
|
| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} Length = 98 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a13 [TaxId: 9606]
Score = 54.5 bits (131), Expect = 4e-10
Identities = 16/95 (16%), Positives = 37/95 (38%), Gaps = 9/95 (9%)
Query: 364 AENLS--EEEIMGLKEMF-KSMDTD-NSGTITFEELKAGLPKLG--TRLSESEVRQLMEA 417
AE L+ EE I + F + +++ E K + + + + M++
Sbjct: 3 AEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKS 62
Query: 418 ADVDGNGTIDYIEF---ITATMHMNRVEREEHLYK 449
DV+ + + + E+ I R +++ + K
Sbjct: 63 LDVNQDSELKFNEYWRLIGELAKEIRKKKDLKIRK 97
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 170 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 75.1 bits (184), Expect = 2e-16
Identities = 17/143 (11%), Positives = 40/143 (27%), Gaps = 20/143 (13%)
Query: 381 SMDTDNSGTITFEELKAGLPKLGTRLSES--EVRQLMEAADVDGNGTIDYIEFITATMHM 438
M ++ G I + P R+ + D + + M
Sbjct: 15 KMQLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYKS--FLM 72
Query: 439 NRVEREEHLYKAFEYFDKDNSGYITMEELEHALKK-----------YNMGDAKTIKEIIA 487
+ R E + + F + Y+T E L + + + ++ +I
Sbjct: 73 SLCPRPE-IDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLID 131
Query: 488 EV----DIDNDGRINYEEFAAMM 506
+ G+++ E +
Sbjct: 132 KYEPSGINAQRGQLSPEGMVWFL 154
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Score = 71.1 bits (174), Expect = 3e-16
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEF 502
EE L F FDK+ GYI +EEL+ L+ I+E++ + D +NDGRI+Y+EF
Sbjct: 14 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 73
Query: 503 AAMMRK 508
M+
Sbjct: 74 LEFMKG 79
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Score = 63.8 bits (155), Expect = 2e-13
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 360 LKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAAD 419
+K ++ +EEE L ++F+ D + G I EELK L G ++E ++ +LM+ D
Sbjct: 5 MKDDSKGKTEEE---LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGD 61
Query: 420 VDGNGTIDYIEFIT 433
+ +G IDY EF+
Sbjct: 62 KNNDGRIDYDEFLE 75
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Score = 47.3 bits (112), Expect = 1e-07
Identities = 16/67 (23%), Positives = 27/67 (40%)
Query: 407 SESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEE 466
+E E+ L D + +G ID E E+ + + + DK+N G I +E
Sbjct: 13 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 72
Query: 467 LEHALKK 473
+K
Sbjct: 73 FLEFMKG 79
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 70.7 bits (173), Expect = 4e-16
Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 449 KAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507
+ FE FDK+ G ++++E ++ + I + E+D+D +G +N +EF + +
Sbjct: 5 RVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIE 64
Query: 508 K 508
K
Sbjct: 65 K 65
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 62.3 bits (151), Expect = 3e-13
Identities = 15/64 (23%), Positives = 30/64 (46%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITA 434
K +F+ D + G ++ +E + ++ ++ + E DVDGNG ++ EF +
Sbjct: 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSC 62
Query: 435 TMHM 438
M
Sbjct: 63 IEKM 66
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 52.6 bits (126), Expect = 8e-10
Identities = 15/65 (23%), Positives = 30/65 (46%)
Query: 409 SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELE 468
S +++ E D + +G + EF + + +E + K FE D D +G + +E
Sbjct: 1 SSAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFT 60
Query: 469 HALKK 473
++K
Sbjct: 61 SCIEK 65
|
| >d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} Length = 78 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Pig (Sus scrofa) [TaxId: 9823]
Score = 69.9 bits (171), Expect = 1e-15
Identities = 15/72 (20%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 442 EREEHLYKAFEYFD--KDNSGYITMEELEHALKKYNMG---DAKTIKEIIAEVDIDNDGR 496
+ L FE + + + ++ EEL+ ++ +T+ ++ E+D + DG
Sbjct: 4 KSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGE 63
Query: 497 INYEEFAAMMRK 508
+++EEF +++K
Sbjct: 64 VSFEEFQVLVKK 75
|
| >d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} Length = 78 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Pig (Sus scrofa) [TaxId: 9823]
Score = 60.6 bits (147), Expect = 2e-12
Identities = 14/77 (18%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
Query: 368 SEEEIMGLKEMFKSMDT--DNSGTITFEELKAGLPKLGTRL--SESEVRQLMEAADVDGN 423
+++ LK +F+ + ++ EELK + L + L + D +G+
Sbjct: 2 AQKSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGD 61
Query: 424 GTIDYIEFITATMHMNR 440
G + + EF +++
Sbjct: 62 GEVSFEEFQVLVKKISQ 78
|
| >d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} Length = 73 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Rattus norvegicus [TaxId: 10116]
Score = 69.6 bits (170), Expect = 1e-15
Identities = 30/67 (44%), Positives = 42/67 (62%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGNGTI
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 427 DYIEFIT 433
D+ EF+T
Sbjct: 62 DFPEFLT 68
|
| >d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} Length = 73 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Rattus norvegicus [TaxId: 10116]
Score = 62.3 bits (151), Expect = 4e-13
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYE 500
E+ +AF FDKD G IT +EL ++ ++++I EVD D +G I++
Sbjct: 5 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 64
Query: 501 EFAAMMRK 508
EF MM +
Sbjct: 65 EFLTMMAR 72
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 69.6 bits (170), Expect = 1e-15
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
LSEE I K F D D G I+ +EL + LG ++ E+ ++E D DG+GTI
Sbjct: 8 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 67
Query: 427 DYIEFIT 433
D+ EF+
Sbjct: 68 DFEEFLV 74
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 68.1 bits (166), Expect = 4e-15
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYE 500
E AF+ FD D G I+ +EL ++ + + II EVD D G I++E
Sbjct: 11 EMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 70
Query: 501 EFAAMMRK 508
EF MM +
Sbjct: 71 EFLVMMVR 78
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 82 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Score = 69.2 bits (169), Expect = 2e-15
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 361 KVIAENLSEEEIMGLKEMFKSMDTDNS-GTITFEELKAGLPKLGTRLSESEVRQLMEAAD 419
K E L+EE+ K F G+I+ +EL + LG + E++++++ D
Sbjct: 3 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 62
Query: 420 VDGNGTIDYIEFIT 433
DG+GT+D+ EF+
Sbjct: 63 EDGSGTVDFDEFLV 76
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 82 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Score = 63.8 bits (155), Expect = 1e-13
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 442 EREEHLYKAFEYFDKDNS-GYITMEELEHALKKYNMGDAK-TIKEIIAEVDIDNDGRINY 499
E++ AF+ F G I+ +EL ++ ++E+I EVD D G +++
Sbjct: 12 EQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDF 71
Query: 500 EEFAAMMRK 508
+EF MM +
Sbjct: 72 DEFLVMMVR 80
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 65 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Score = 67.0 bits (163), Expect = 7e-15
Identities = 29/64 (45%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT-IKEIIAEVDIDNDGRINYEEF 502
EE + +AF FDKD +GYI+ EL H + + E+I E DID DG++NYEEF
Sbjct: 2 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 61
Query: 503 AAMM 506
MM
Sbjct: 62 VQMM 65
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 65 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Score = 63.1 bits (153), Expect = 2e-13
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
SEEEI +E F+ D D +G I+ EL+ + LG +L++ EV +++ AD+DG+G ++
Sbjct: 1 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 57
Query: 428 YIEFIT 433
Y EF+
Sbjct: 58 YEEFVQ 63
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 65 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Score = 41.9 bits (98), Expect = 5e-06
Identities = 17/60 (28%), Positives = 25/60 (41%)
Query: 407 SESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEE 466
SE E+R+ D DGNG I E ++ +E + + D D G + EE
Sbjct: 1 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 60
|
| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} Length = 76 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Cow (Bos taurus) [TaxId: 9913]
Score = 67.3 bits (164), Expect = 8e-15
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 442 EREEHLYKAFEYFDKD--NSGYITMEELEHALKK---YNMGDAKTIKEIIAEVDIDNDGR 496
+ E + AFE F + I+ EEL+ ++ + T+ E+I EVD + DG
Sbjct: 2 KSPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGE 61
Query: 497 INYEEFAAMMRK 508
+++EEF MM+K
Sbjct: 62 VSFEEFLVMMKK 73
|
| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} Length = 76 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Cow (Bos taurus) [TaxId: 9913]
Score = 56.5 bits (136), Expect = 5e-11
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLG--TRLSESEVRQLMEAADVDGNGT 425
S EEI G E+F + + I+ EELK + LG S + +++E D +G+G
Sbjct: 3 SPEEIKGAFEVF-AAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGE 61
Query: 426 IDYIEFIT 433
+ + EF+
Sbjct: 62 VSFEEFLV 69
|
| >d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]
Score = 66.0 bits (161), Expect = 3e-14
Identities = 14/76 (18%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Query: 438 MNRVERE-EHLYKAF-EYFDKDNSGYI-TMEELEHALKKY--NMGDAKTIKEIIAEVDID 492
+ +E+ + + +Y + + ++L+ L+ K E+DI+
Sbjct: 2 LTELEKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDIN 61
Query: 493 NDGRINYEEFAAMMRK 508
DG +N++EF ++ K
Sbjct: 62 TDGAVNFQEFLILVIK 77
|
| >d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]
Score = 47.9 bits (114), Expect = 7e-08
Identities = 9/68 (13%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
Query: 369 EEEIMGLKEMF-KSMDTDNSGTI-TFEELKAGLPKL-GTRLSESEVRQLMEAADVDGNGT 425
E+ + + +++ K + ++LK L + + + D++ +G
Sbjct: 6 EKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGA 65
Query: 426 IDYIEFIT 433
+++ EF+
Sbjct: 66 VNFQEFLI 73
|
| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a4 [TaxId: 9606]
Score = 64.5 bits (157), Expect = 1e-13
Identities = 10/72 (13%), Positives = 31/72 (43%), Gaps = 8/72 (11%)
Query: 445 EHLYKAF-EYFDKD-NSGYITMEELEHALKK------YNMGDAKTIKEIIAEVDIDNDGR 496
+ + F +Y K+ + + EL+ L + D +++++ +D + D
Sbjct: 9 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNE 68
Query: 497 INYEEFAAMMRK 508
++++E+ +
Sbjct: 69 VDFQEYCVFLSC 80
|
| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a4 [TaxId: 9606]
Score = 58.7 bits (142), Expect = 1e-11
Identities = 12/72 (16%), Positives = 26/72 (36%), Gaps = 7/72 (9%)
Query: 369 EEEIMGLKEMFKSMDT--DNSGTITFEELKAGLPKLGTRL-----SESEVRQLMEAADVD 421
E+ + + F + + ELK L + E+ ++LM D +
Sbjct: 5 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSN 64
Query: 422 GNGTIDYIEFIT 433
+ +D+ E+
Sbjct: 65 RDNEVDFQEYCV 76
|
| >d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 181 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Apoptosis-linked protein alg-2 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 66.3 bits (160), Expect = 2e-13
Identities = 24/146 (16%), Positives = 50/146 (34%), Gaps = 6/146 (4%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLG-TRLSESEVRQLMEAADVDG 422
A + + L +F+ +D D SG I+ EL+ L T + VR ++ D +
Sbjct: 10 AAGAALPDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDREN 69
Query: 423 NGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTI 482
+++ EF ++ Y ++ E + +
Sbjct: 70 KAGVNFSEFTGVWKYITD-----WQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFH 124
Query: 483 KEIIAEVDIDNDGRINYEEFAAMMRK 508
+I + D G+I +++F
Sbjct: 125 DILIRKFDRQGRGQIAFDDFIQGCIV 150
|
| >d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 181 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Apoptosis-linked protein alg-2 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 49.3 bits (116), Expect = 2e-07
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Query: 378 MFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437
+F++ D DNSG I ELK L G RLS+ L+ D G G I + +FI +
Sbjct: 91 VFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIV 150
Query: 438 MNRVEREEHLYKAFEYFDKDNSGYITMEELE 468
+ + L F +D D G+I + +
Sbjct: 151 L------QRLTDIFRRYDTDQDGWIQVSYEQ 175
|
| >d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 181 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Apoptosis-linked protein alg-2 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 40.5 bits (93), Expect = 2e-04
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 441 VEREEHLYKAFEYFDKDNSGYITMEELEHALKK--YNMGDAKTIKEIIAEVDIDNDGRIN 498
+ + L+ F+ DKD SG I+ EL+ AL + + T++ II+ D +N +N
Sbjct: 15 LPDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVN 74
Query: 499 YEEFAAMMRKGNPDM 513
+ EF + +
Sbjct: 75 FSEFTGVWKYITDWQ 89
|
| >d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} Length = 99 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 62.4 bits (151), Expect = 7e-13
Identities = 15/73 (20%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Query: 436 MHMNRVEREEHLY-KAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDND 494
+ + ++ +Y K + + N+G + + LKK + D + +I D D
Sbjct: 1 LSLTQLSSGNPVYEKYYRQVEAGNTGRVLALDAAAFLKKSGLPD-LILGKIWDLADTDGK 59
Query: 495 GRINYEEFAAMMR 507
G ++ +EF +R
Sbjct: 60 GVLSKQEFFVALR 72
|
| >d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} Length = 99 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 46.2 bits (109), Expect = 4e-07
Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 376 KEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITAT 435
++ ++ ++ N+G + + A L K G + + ++ + AD DG G + EF A
Sbjct: 14 EKYYRQVEAGNTGRVLALDAAAFLKKSGLP--DLILGKIWDLADTDGKGVLSKQEFFVA- 70
Query: 436 MHM 438
+ +
Sbjct: 71 LRL 73
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} Length = 92 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Score = 61.5 bits (149), Expect = 1e-12
Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
Query: 445 EHLYKAFEYFDKDNSGYITMEELEHALKK------YNMGDAKTIKEIIAEVDIDNDGRIN 498
E + F F D GY+T E+L ++K N D + +I+ ++D DG++
Sbjct: 9 ETMMFTFHKFAGDK-GYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVG 67
Query: 499 YEEFAAMMRK 508
++ F +++
Sbjct: 68 FQSFFSLIAG 77
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} Length = 92 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Score = 54.2 bits (130), Expect = 6e-10
Identities = 13/70 (18%), Positives = 27/70 (38%), Gaps = 6/70 (8%)
Query: 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLG-----TRLSESEVRQLMEAADVDGN 423
E + + F D G +T E+L+ + K + V ++M+ D +
Sbjct: 5 EHAMETMMFTFHKFAGDK-GYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRD 63
Query: 424 GTIDYIEFIT 433
G + + F +
Sbjct: 64 GKVGFQSFFS 73
|
| >d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 61 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Score = 60.0 bits (145), Expect = 2e-12
Identities = 20/58 (34%), Positives = 38/58 (65%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFI 432
+ F+ D +++G ++ +L+ L LG +L+++EV +L++ +VD NG IDY +FI
Sbjct: 3 FVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFI 60
|
| >d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 61 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Score = 58.9 bits (142), Expect = 5e-12
Identities = 17/59 (28%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 445 EHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEF 502
E KAF+ FDK+++G +++ +L + L + E++ V++D++G I+Y++F
Sbjct: 1 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKF 59
|
| >d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 61 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Score = 39.6 bits (92), Expect = 3e-05
Identities = 5/57 (8%), Positives = 21/57 (36%)
Query: 410 EVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEE 466
+ + + D + G + + + + + + + + D++G I ++
Sbjct: 2 DFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKK 58
|
| >d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} Length = 99 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Nucleobindin 1 (CALNUC) species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.8 bits (147), Expect = 2e-12
Identities = 14/84 (16%), Positives = 27/84 (32%), Gaps = 17/84 (20%)
Query: 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKK-----------------YNMGDAKTIKE 484
+ F D ++ G + +ELE K + +
Sbjct: 13 PNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREH 72
Query: 485 IIAEVDIDNDGRINYEEFAAMMRK 508
++ VD + D + EEF A ++
Sbjct: 73 VMKNVDTNQDRLVTLEEFLASTQR 96
|
| >d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} Length = 99 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Nucleobindin 1 (CALNUC) species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.4 bits (138), Expect = 4e-11
Identities = 14/87 (16%), Positives = 31/87 (35%), Gaps = 17/87 (19%)
Query: 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE-------------- 410
+ L K F D ++ G + +EL+A K ++ + +
Sbjct: 9 DGLDPNR-FNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERL 67
Query: 411 --VRQLMEAADVDGNGTIDYIEFITAT 435
+M+ D + + + EF+ +T
Sbjct: 68 RMREHVMKNVDTNQDRLVTLEEFLAST 94
|
| >d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} Length = 83 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: DJ-1-binding protein, DJBP species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.6 bits (141), Expect = 1e-11
Identities = 15/76 (19%), Positives = 29/76 (38%), Gaps = 1/76 (1%)
Query: 432 ITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVD 490
I A +H + + FE FD + I+ EE + + + E+
Sbjct: 7 ILARLHKAVTSHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMP 66
Query: 491 IDNDGRINYEEFAAMM 506
++ GR+ Y +F +
Sbjct: 67 VNAKGRLKYPDFLSRF 82
|
| >d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} Length = 83 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: DJ-1-binding protein, DJBP species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.7 bits (136), Expect = 5e-11
Identities = 14/66 (21%), Positives = 31/66 (46%)
Query: 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDY 428
+ + F++ DT + TI+ EE +A + L++ + +L V+ G + Y
Sbjct: 16 TSHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKY 75
Query: 429 IEFITA 434
+F++
Sbjct: 76 PDFLSR 81
|
| >d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} Length = 83 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: DJ-1-binding protein, DJBP species: Human (Homo sapiens) [TaxId: 9606]
Score = 34.3 bits (78), Expect = 0.004
Identities = 9/65 (13%), Positives = 18/65 (27%)
Query: 407 SESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEE 466
+ Q E D TI EF ++ +E + + + G + +
Sbjct: 18 HYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPD 77
Query: 467 LEHAL 471
Sbjct: 78 FLSRF 82
|
| >d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.4 bits (141), Expect = 2e-11
Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
+ E+ +F S+ +G ++ +++K L L + ++ E +D+D +G +
Sbjct: 4 VKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLNSK--LPVDILGRVWELSDIDHDGML 60
Query: 427 DYIEFITATMHMNRVEREEH 446
D EF A M + E+
Sbjct: 61 DRDEFAVA-MFLVYCALEKE 79
|
| >d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.0 bits (114), Expect = 9e-08
Identities = 12/59 (20%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 449 KAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507
F+ +G+++ ++++ L + + + DID+DG ++ +EFA M
Sbjct: 14 AIFDSLS-PVNGFLSGDKVKPVLLNSKLPV-DILGRVWELSDIDHDGMLDRDEFAVAMF 70
|
| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]
Score = 58.0 bits (140), Expect = 2e-11
Identities = 16/72 (22%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Query: 445 EHLYKAF-EYFDKD-NSGYITMEELEHALKKYNMG------DAKTIKEIIAEVDIDNDGR 496
E L F + K+ + ++ +EL+ L+ DA + +I+ E+D + DG
Sbjct: 9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGE 68
Query: 497 INYEEFAAMMRK 508
++++EF ++
Sbjct: 69 VDFQEFVVLVAA 80
|
| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]
Score = 54.9 bits (132), Expect = 2e-10
Identities = 16/97 (16%), Positives = 39/97 (40%), Gaps = 15/97 (15%)
Query: 369 EEEIMGLKEMF-KSMDTD-NSGTITFEELKAGLPKLG-----TRLSESEVRQLMEAADVD 421
E + L +F + + ++ +ELK L + V ++M+ D +
Sbjct: 5 ETAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDEN 64
Query: 422 GNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDN 458
G+G +D+ EF+ + + + +F +++
Sbjct: 65 GDGEVDFQEFVVL---VAALTVACN-----NFFWENS 93
|
| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a3 [TaxId: 9606]
Score = 57.1 bits (138), Expect = 5e-11
Identities = 11/72 (15%), Positives = 26/72 (36%), Gaps = 8/72 (11%)
Query: 445 EHLYKAF-EYFDKDNSGY-ITMEELEHALKKYNMG------DAKTIKEIIAEVDIDNDGR 496
+ F EY + Y + EL+ L+K + ++ +D + D
Sbjct: 9 AAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCE 68
Query: 497 INYEEFAAMMRK 508
+++ E+ +
Sbjct: 69 VDFVEYVRSLAC 80
|
| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a3 [TaxId: 9606]
Score = 51.0 bits (122), Expect = 6e-09
Identities = 12/72 (16%), Positives = 26/72 (36%), Gaps = 7/72 (9%)
Query: 369 EEEIMGLKEMF-KSMDTDNSG-TITFEELKAGLPKLGT-----RLSESEVRQLMEAADVD 421
E+ + + F + + ELK L K E + + M D +
Sbjct: 5 EQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTN 64
Query: 422 GNGTIDYIEFIT 433
+ +D++E++
Sbjct: 65 KDCEVDFVEYVR 76
|
| >d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} Length = 89 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a6 [TaxId: 9606]
Score = 56.0 bits (135), Expect = 9e-11
Identities = 11/70 (15%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Query: 445 EHLYKAF-EYFDKDNSGY-ITMEELEHALKK----YNMGDAKTIKEIIAEVDIDNDGRIN 498
L F +Y ++ + ++ +EL+ ++K + I ++ ++D + D +N
Sbjct: 9 GLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVN 68
Query: 499 YEEFAAMMRK 508
++E+ +
Sbjct: 69 FQEYVTFLGA 78
|
| >d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} Length = 89 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a6 [TaxId: 9606]
Score = 43.3 bits (102), Expect = 3e-06
Identities = 15/70 (21%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 369 EEEIMGLKEMF-KSMDTDNSGTIT----FEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
++ I L +F K + +EL +G++L ++E+ +LME D + +
Sbjct: 5 DQAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKD 64
Query: 424 GTIDYIEFIT 433
+++ E++T
Sbjct: 65 QEVNFQEYVT 74
|
| >d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.2 bits (135), Expect = 1e-10
Identities = 16/72 (22%), Positives = 28/72 (38%), Gaps = 3/72 (4%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
+S E E+F D D G ++ E++ L T L + + + D G +
Sbjct: 4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVRE--IFLKTGLPSTLLAHIWSLCDTKDCGKL 61
Query: 427 DYIEFITATMHM 438
+F A H+
Sbjct: 62 SKDQFALA-FHL 72
|
| >d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.4 bits (133), Expect = 2e-10
Identities = 12/70 (17%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 438 MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRI 497
++ E+ + + F DKD G+++ E+ + + I + D + G++
Sbjct: 4 VSPAEKAK-YDEIFLKTDKDMDGFVSGLEVREI-FLKTGLPSTLLAHIWSLCDTKDCGKL 61
Query: 498 NYEEFAAMMR 507
+ ++FA
Sbjct: 62 SKDQFALAFH 71
|
| >d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Score = 35.0 bits (80), Expect = 0.003
Identities = 8/64 (12%), Positives = 22/64 (34%), Gaps = 2/64 (3%)
Query: 409 SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELE 468
++ ++ D D +G + +E + L + D + G ++ ++
Sbjct: 10 AKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTL--LAHIWSLCDTKDCGKLSKDQFA 67
Query: 469 HALK 472
A
Sbjct: 68 LAFH 71
|
| >d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} Length = 182 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Programmed cell death 6 protein-like protein species: Leishmania major [TaxId: 5664]
Score = 58.5 bits (140), Expect = 1e-10
Identities = 26/145 (17%), Positives = 57/145 (39%), Gaps = 7/145 (4%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
A ++++ + L E F+++DTD SG I+ EL A L G S + +L+ D + +
Sbjct: 11 ARHMNDNQ--ELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHS 68
Query: 424 GTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIK 483
G I + EF + + + D++ +T +
Sbjct: 69 GEITFDEFKDLHHFILSMREGFRKRDSSGDGRLDSNEVRAALL-----SSGYQVSEQTFQ 123
Query: 484 EIIAEVDIDNDGRINYEEFAAMMRK 508
++ + D G + ++++ +
Sbjct: 124 ALMRKFDRQRRGSLGFDDYVELSIF 148
|
| >d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} Length = 182 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Programmed cell death 6 protein-like protein species: Leishmania major [TaxId: 5664]
Score = 45.4 bits (106), Expect = 3e-06
Identities = 18/88 (20%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 378 MFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437
F+ D+ G + E++A L G ++SE + LM D G++ + +++ ++
Sbjct: 89 GFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIF 148
Query: 438 MNRVEREEHLYKAFEYFDKDNSGYITME 465
+ R + F ++D++ +G +T
Sbjct: 149 VCR------VRNVFAFYDRERTGQVTFT 170
|
| >d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 92 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Reps1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 55.4 bits (133), Expect = 2e-10
Identities = 17/80 (21%), Positives = 32/80 (40%), Gaps = 3/80 (3%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
+++E+ FK++ D +G I K K E+ + E +D D +G +
Sbjct: 3 ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKL--PILELSHIWELSDFDKDGAL 60
Query: 427 DYIEFITATMHMNRVEREEH 446
EF A H+ + +
Sbjct: 61 TLDEFCAA-FHLVVARKNGY 79
|
| >d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 92 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Reps1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 53.5 bits (128), Expect = 1e-09
Identities = 14/70 (20%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Query: 438 MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRI 497
+ +R+ F+ D +G+I + K + + I D D DG +
Sbjct: 3 ITDEQRQY-YVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPIL-ELSHIWELSDFDKDGAL 60
Query: 498 NYEEFAAMMR 507
+EF A
Sbjct: 61 TLDEFCAAFH 70
|
| >d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]
Score = 54.4 bits (131), Expect = 4e-10
Identities = 16/72 (22%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Query: 445 EHLYKAF-EYFDKD-NSGYITMEELEHALKK------YNMGDAKTIKEIIAEVDIDNDGR 496
E + F +Y + + ++ EL+ L K N+ D I EI +D + D +
Sbjct: 8 EGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQ 67
Query: 497 INYEEFAAMMRK 508
++++EF +++
Sbjct: 68 VDFQEFISLVAI 79
|
| >d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]
Score = 43.6 bits (103), Expect = 2e-06
Identities = 15/72 (20%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Query: 369 EEEIMGLKEMFKSMDT--DNSGTITFEELKAGLPKLG-----TRLSESEVRQLMEAADVD 421
EE + G+ +F + T++ ELK L K ++ + ++ + D +
Sbjct: 4 EEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDAN 63
Query: 422 GNGTIDYIEFIT 433
+ +D+ EFI+
Sbjct: 64 QDEQVDFQEFIS 75
|
| >d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} Length = 100 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]
Score = 53.1 bits (127), Expect = 2e-09
Identities = 11/77 (14%), Positives = 28/77 (36%), Gaps = 10/77 (12%)
Query: 442 EREEHLYKAFEYFDK--DNSGYITMEELEHALKK--------YNMGDAKTIKEIIAEVDI 491
+ E + + F K I L +K+ + + ++ + D
Sbjct: 4 QAERSIIGMIDMFHKYTRRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDK 63
Query: 492 DNDGRINYEEFAAMMRK 508
+ D +I++ EF +++
Sbjct: 64 NEDKKIDFSEFLSLLGD 80
|
| >d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} Length = 100 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]
Score = 51.9 bits (124), Expect = 4e-09
Identities = 13/77 (16%), Positives = 29/77 (37%), Gaps = 8/77 (10%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGT-------RLSESEVRQLME 416
+ +E I+G+ +MF I L + + + + + + E
Sbjct: 1 SNTQAERSIIGMIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFE 59
Query: 417 AADVDGNGTIDYIEFIT 433
D + + ID+ EF++
Sbjct: 60 KKDKNEDKKIDFSEFLS 76
|
| >d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]} Length = 110 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Pob1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.8 bits (113), Expect = 1e-07
Identities = 15/70 (21%), Positives = 24/70 (34%), Gaps = 2/70 (2%)
Query: 438 MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRI 497
+ +RE F D S +I+ ++ K + + I D D DG +
Sbjct: 16 ITEEQREY-YVNQFRSLQPDPSSFISGSVAKNFFTKSKLSI-PELSYIWELSDADCDGAL 73
Query: 498 NYEEFAAMMR 507
EF A
Sbjct: 74 TLPEFCAAFH 83
|
| >d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]} Length = 110 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Pob1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.0 bits (111), Expect = 3e-07
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
++EE+ F+S+ D S I+ K ++LS E+ + E +D D +G +
Sbjct: 16 ITEEQREYYVNQFRSLQPDPSSFISGSVAKNF--FTKSKLSIPELSYIWELSDADCDGAL 73
Query: 427 DYIEFITATMHM 438
EF A H+
Sbjct: 74 TLPEFCAA-FHL 84
|
| >d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 33 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Score = 43.0 bits (102), Expect = 9e-07
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Query: 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG 477
EE + +AF FDKD +GYI+ EL H + N+G
Sbjct: 2 EEEIREAFRVFDKDGNGYISAAELRHVMT--NLG 33
|
| >d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 33 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Score = 37.2 bits (87), Expect = 1e-04
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLG 403
SEEEI +E F+ D D +G I+ EL+ + LG
Sbjct: 1 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLG 33
|
| >d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} Length = 90 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Cow (Bos taurus), s100b [TaxId: 9913]
Score = 40.5 bits (95), Expect = 3e-05
Identities = 14/80 (17%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
Query: 438 MNRVERE-EHLYKAF-EYFDKD-NSGYITMEELEHALKKY------NMGDAKTIKEIIAE 488
M+ +E+ L F +Y ++ + + EL+ + + + + + +++
Sbjct: 1 MSELEKAVVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMET 60
Query: 489 VDIDNDGRINYEEFAAMMRK 508
+D D DG +++EF A +
Sbjct: 61 LDSDGDGECDFQEFMAFVAM 80
|
| >d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} Length = 90 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Cow (Bos taurus), s100b [TaxId: 9913]
Score = 38.6 bits (90), Expect = 1e-04
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Query: 369 EEEIMGLKEMFK--SMDTDNSGTITFEELKAGLPK-----LGTRLSESEVRQLMEAADVD 421
E+ ++ L ++F S + + ELK + L + V ++ME D D
Sbjct: 5 EKAVVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSD 64
Query: 422 GNGTIDYIEFIT 433
G+G D+ EF+
Sbjct: 65 GDGECDFQEFMA 76
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} Length = 392 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Score = 43.3 bits (101), Expect = 5e-05
Identities = 15/147 (10%), Positives = 47/147 (31%), Gaps = 4/147 (2%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRD----DVEDVRREVQIMHHLTGHR 128
+E+G G + + ++ + K + + ++ R E + H
Sbjct: 32 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHV 91
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
+ + Y D +M+ + ++ + + +G + ++ + + Y
Sbjct: 92 PHLVPRVFYSDTEMAVTVMEDLSHLKIARKGLIEGENYPHLSQHIGEFLGKTLFYSSDYA 151
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDF 215
+ + K F++ + F
Sbjct: 152 LEPKVKKQLVKQFTNPELCDITERLVF 178
|
| >d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]
Score = 39.0 bits (91), Expect = 1e-04
Identities = 15/70 (21%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 445 EHLYKAF-EYFDKD-NSGYITMEELEHALKKY------NMGDAKTIKEIIAEVDIDNDGR 496
E L F ++ +D N+ I+ E + N D + ++ ++D+D+DG+
Sbjct: 9 ESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQ 68
Query: 497 INYEEFAAMM 506
++++EF ++
Sbjct: 69 LDFQEFLNLI 78
|
| >d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]
Score = 38.2 bits (89), Expect = 2e-04
Identities = 14/72 (19%), Positives = 30/72 (41%), Gaps = 7/72 (9%)
Query: 369 EEEIMGLKEMFK--SMDTDNSGTITFEELKAGLPK-----LGTRLSESEVRQLMEAADVD 421
E I L +F+ + N+ I+ E + + + ++M+ D+D
Sbjct: 5 ERCIESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLD 64
Query: 422 GNGTIDYIEFIT 433
+G +D+ EF+
Sbjct: 65 SDGQLDFQEFLN 76
|
| >d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]} Length = 94 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100p [TaxId: 9606]
Score = 38.6 bits (90), Expect = 2e-04
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 369 EEEIMGLKEMFK--SMDTDNSGTITFEELKAGLPK-----LGTRLSESEVRQLMEAADVD 421
E + + ++F S ++ T+T ELK + K L + + V +L++ D +
Sbjct: 5 ETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDAN 64
Query: 422 GNGTIDYIEFIT 433
G+ +D+ EFI
Sbjct: 65 GDAQVDFSEFIV 76
|
| >d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]} Length = 94 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100p [TaxId: 9606]
Score = 37.0 bits (86), Expect = 5e-04
Identities = 9/60 (15%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Query: 455 DKDNSGYITMEELEHALKKY------NMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508
+ ++ +T EL+ ++K + D + +++ ++D + D ++++ EF +
Sbjct: 21 SEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAA 80
|
| >d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]} Length = 83 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]
Score = 37.0 bits (86), Expect = 4e-04
Identities = 14/44 (31%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 465 EELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508
++L++ LKK N + K I+ I+ ++D + D ++++EEF +M +
Sbjct: 40 KDLQNFLKKEN-KNEKVIEHIMEDLDTNADKQLSFEEFIMLMAR 82
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 520 | |||
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.92 | |
| d1exra_ | 146 | Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI | 99.91 | |
| d1lkja_ | 146 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 99.9 | |
| d1wdcb_ | 142 | Myosin Essential Chain {Bay scallop (Aequipecten i | 99.89 | |
| d2obha1 | 141 | Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | 99.89 | |
| d1topa_ | 162 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.88 | |
| d1wdcc_ | 152 | Myosin Regulatory Chain {Bay scallop (Aequipecten | 99.87 | |
| d1dtla_ | 156 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.87 | |
| d2mysb_ | 145 | Myosin Essential Chain {Chicken (Gallus gallus) [T | 99.87 | |
| d1s6ia_ | 182 | Calcium-dependent protein kinase sk5 CLD {Soybean | 99.87 | |
| d1jfja_ | 134 | EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: | 99.86 | |
| d2mysc_ | 145 | Myosin Regulatory Chain {Chicken (Gallus gallus) [ | 99.86 | |
| d1ggwa_ | 140 | Cdc4p {Fission yeast (Schizosaccharomyces pombe) [ | 99.85 | |
| d1y1xa_ | 182 | Programmed cell death 6 protein-like protein {Leis | 99.84 | |
| d1m45a_ | 146 | Myosin Light Chain Mlc1p {Baker's yeast (Saccharom | 99.84 | |
| d1auib_ | 165 | Calcineurin regulatory subunit (B-chain) {Human (H | 99.84 | |
| d1jbaa_ | 189 | Guanylate cyclase activating protein 2, GCAP-2 {Co | 99.83 | |
| d1w7jb1 | 139 | Myosin Essential Chain {Human (Homo sapiens) [TaxI | 99.82 | |
| d1hqva_ | 181 | Apoptosis-linked protein alg-2 {Mouse (Mus musculu | 99.82 | |
| d2zfda1 | 183 | Calcineurin B-like protein 2 {Thale cress (Arabido | 99.81 | |
| d1bjfa_ | 181 | Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | 99.8 | |
| d1fpwa_ | 190 | Frequenin (neuronal calcium sensor 1) {Baker's yea | 99.79 | |
| d1g8ia_ | 187 | Frequenin (neuronal calcium sensor 1) {Human (Homo | 99.79 | |
| d1omra_ | 201 | Recoverin {Cow (Bos taurus) [TaxId: 9913]} | 99.79 | |
| d1s6ca_ | 178 | Kchip1, Kv4 potassium channel-interacting protein | 99.78 | |
| d1k94a_ | 165 | Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | 99.77 | |
| d1qxpa2 | 188 | Calpain large subunit, C-terminal domain (domain I | 99.77 | |
| d1qv0a_ | 189 | Calcium-regulated photoprotein {Hydrozoa (Obelia l | 99.77 | |
| d2scpa_ | 174 | Sarcoplasmic calcium-binding protein {Sandworm (Ne | 99.76 | |
| d1df0a1 | 186 | Calpain large subunit, C-terminal domain (domain I | 99.76 | |
| d2sasa_ | 185 | Sarcoplasmic calcium-binding protein {Amphioxus (B | 99.75 | |
| d1alva_ | 173 | Calpain small (regulatory) subunit (domain VI) {Pi | 99.75 | |
| d1ij5a_ | 321 | Cbp40 (plasmodial specific CaII-binding protein LA | 99.74 | |
| d1xo5a_ | 180 | Calcium- and integrin-binding protein, CIB {Human | 99.74 | |
| d1juoa_ | 172 | Sorcin {Human (Homo sapiens) [TaxId: 9606]} | 99.73 | |
| d5pala_ | 109 | Parvalbumin {Leopard shark (Triakis semifasciata) | 99.73 | |
| d1uhka1 | 187 | Calcium-regulated photoprotein {Jellyfish (Aequore | 99.72 | |
| d1pvaa_ | 109 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 99.71 | |
| d1nyaa_ | 176 | Calerythrin {Saccharopolyspora erythraea [TaxId: 1 | 99.69 | |
| d2pvba_ | 107 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 99.65 | |
| d1rwya_ | 109 | Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | 99.64 | |
| d1rroa_ | 108 | Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116 | 99.59 | |
| d1k94a_ | 165 | Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | 99.56 | |
| d1df0a1 | 186 | Calpain large subunit, C-terminal domain (domain I | 99.53 | |
| d1hqva_ | 181 | Apoptosis-linked protein alg-2 {Mouse (Mus musculu | 99.52 | |
| d1jc2a_ | 75 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.5 | |
| d1juoa_ | 172 | Sorcin {Human (Homo sapiens) [TaxId: 9606]} | 99.49 | |
| d1alva_ | 173 | Calpain small (regulatory) subunit (domain VI) {Pi | 99.49 | |
| d1fw4a_ | 65 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 99.48 | |
| d1y1xa_ | 182 | Programmed cell death 6 protein-like protein {Leis | 99.48 | |
| d1qxpa2 | 188 | Calpain large subunit, C-terminal domain (domain I | 99.48 | |
| d1oqpa_ | 77 | Caltractin (centrin 2) {Green algae (Chlamydomonas | 99.47 | |
| d2zkmx1 | 170 | Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI | 99.47 | |
| d1tiza_ | 67 | Calmodulin-related protein T21P5.17 {Thale cress ( | 99.46 | |
| d1fi5a_ | 81 | Troponin C {Chicken (Gallus gallus), cardiac isofo | 99.46 | |
| d2pq3a1 | 73 | Calmodulin {Rattus norvegicus [TaxId: 10116]} | 99.46 | |
| d1c7va_ | 68 | Calcium vector protein {Amphioxus (Branchiostoma l | 99.45 | |
| d2opoa1 | 81 | Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta | 99.45 | |
| d1f54a_ | 77 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 99.45 | |
| d1avsa_ | 81 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.44 | |
| d1wrka1 | 82 | Troponin C {Human (Homo sapiens), cardiac isoform | 99.44 | |
| d2fcea1 | 61 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 99.44 | |
| d1avsa_ | 81 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.42 | |
| d1s6ja_ | 87 | Calcium-dependent protein kinase sk5 CLD {Soybean | 99.42 | |
| d2opoa1 | 81 | Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta | 99.41 | |
| d1s6ja_ | 87 | Calcium-dependent protein kinase sk5 CLD {Soybean | 99.4 | |
| d2pq3a1 | 73 | Calmodulin {Rattus norvegicus [TaxId: 10116]} | 99.38 | |
| d1f54a_ | 77 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 99.38 | |
| d1jfja_ | 134 | EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: | 99.37 | |
| d1wrka1 | 82 | Troponin C {Human (Homo sapiens), cardiac isoform | 99.36 | |
| d1omra_ | 201 | Recoverin {Cow (Bos taurus) [TaxId: 9913]} | 99.34 | |
| d1fpwa_ | 190 | Frequenin (neuronal calcium sensor 1) {Baker's yea | 99.34 | |
| d1fw4a_ | 65 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 99.33 | |
| d1jc2a_ | 75 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.32 | |
| d1tiza_ | 67 | Calmodulin-related protein T21P5.17 {Thale cress ( | 99.32 | |
| d1pvaa_ | 109 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 99.32 | |
| d5pala_ | 109 | Parvalbumin {Leopard shark (Triakis semifasciata) | 99.3 | |
| d1fi5a_ | 81 | Troponin C {Chicken (Gallus gallus), cardiac isofo | 99.29 | |
| d2fcea1 | 61 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 99.29 | |
| d1c7va_ | 68 | Calcium vector protein {Amphioxus (Branchiostoma l | 99.28 | |
| d1oqpa_ | 77 | Caltractin (centrin 2) {Green algae (Chlamydomonas | 99.27 | |
| d1jbaa_ | 189 | Guanylate cyclase activating protein 2, GCAP-2 {Co | 99.26 | |
| d1qx2a_ | 76 | Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | 99.25 | |
| d1exra_ | 146 | Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI | 99.24 | |
| d1g8ia_ | 187 | Frequenin (neuronal calcium sensor 1) {Human (Homo | 99.23 | |
| d2mysc_ | 145 | Myosin Regulatory Chain {Chicken (Gallus gallus) [ | 99.22 | |
| d1rwya_ | 109 | Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | 99.21 | |
| d2obha1 | 141 | Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | 99.18 | |
| d1wlza1 | 83 | DJ-1-binding protein, DJBP {Human (Homo sapiens) [ | 99.17 | |
| d1bjfa_ | 181 | Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | 99.17 | |
| d2zfda1 | 183 | Calcineurin B-like protein 2 {Thale cress (Arabido | 99.16 | |
| d1wlza1 | 83 | DJ-1-binding protein, DJBP {Human (Homo sapiens) [ | 99.15 | |
| d1lkja_ | 146 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 99.14 | |
| d1rroa_ | 108 | Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116 | 99.14 | |
| d1xo5a_ | 180 | Calcium- and integrin-binding protein, CIB {Human | 99.14 | |
| d1wdcb_ | 142 | Myosin Essential Chain {Bay scallop (Aequipecten i | 99.13 | |
| d1c07a_ | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 99.11 | |
| d2pvba_ | 107 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 99.11 | |
| d1s6ca_ | 178 | Kchip1, Kv4 potassium channel-interacting protein | 99.1 | |
| d1auib_ | 165 | Calcineurin regulatory subunit (B-chain) {Human (H | 99.09 | |
| d1cb1a_ | 78 | Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | 99.07 | |
| d1fi6a_ | 92 | Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | 99.07 | |
| d1zfsa1 | 93 | Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 | 99.07 | |
| d1snla_ | 99 | Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax | 99.06 | |
| d1topa_ | 162 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.05 | |
| d1c07a_ | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 99.05 | |
| d3c1va1 | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta | 99.05 | |
| d1a4pa_ | 92 | Calcyclin (S100) {Human (Homo sapiens), P11 s100a1 | 99.04 | |
| d1yuta1 | 98 | Calcyclin (S100) {Human (Homo sapiens), s100a13 [T | 99.03 | |
| d1ksoa_ | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta | 99.02 | |
| d1s6ia_ | 182 | Calcium-dependent protein kinase sk5 CLD {Soybean | 99.02 | |
| d1dtla_ | 156 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.0 | |
| d1fi6a_ | 92 | Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | 99.0 | |
| d1ggwa_ | 140 | Cdc4p {Fission yeast (Schizosaccharomyces pombe) [ | 98.99 | |
| d1qx2a_ | 76 | Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | 98.99 | |
| d1wdcc_ | 152 | Myosin Regulatory Chain {Bay scallop (Aequipecten | 98.98 | |
| d1zfsa1 | 93 | Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 | 98.98 | |
| d1a4pa_ | 92 | Calcyclin (S100) {Human (Homo sapiens), P11 s100a1 | 98.97 | |
| d1k8ua_ | 89 | Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta | 98.97 | |
| d1w7jb1 | 139 | Myosin Essential Chain {Human (Homo sapiens) [TaxI | 98.94 | |
| d2jxca1 | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 98.93 | |
| d3c1va1 | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta | 98.92 | |
| d1cb1a_ | 78 | Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | 98.92 | |
| d1yuta1 | 98 | Calcyclin (S100) {Human (Homo sapiens), s100a13 [T | 98.91 | |
| d1xk4a1 | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 98.9 | |
| d1m45a_ | 146 | Myosin Light Chain Mlc1p {Baker's yeast (Saccharom | 98.89 | |
| d1ksoa_ | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta | 98.88 | |
| d2mysb_ | 145 | Myosin Essential Chain {Chicken (Gallus gallus) [T | 98.88 | |
| d2jxca1 | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 98.87 | |
| d1e8aa_ | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 98.85 | |
| d1k8ua_ | 89 | Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta | 98.84 | |
| d2sasa_ | 185 | Sarcoplasmic calcium-binding protein {Amphioxus (B | 98.83 | |
| d1iq3a_ | 110 | Pob1 {Human (Homo sapiens) [TaxId: 9606]} | 98.82 | |
| d1qjta_ | 99 | Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | 98.8 | |
| d1psra_ | 100 | Calcyclin (S100) {Human (Homo sapiens), psoriasin | 98.79 | |
| d1qv0a_ | 189 | Calcium-regulated photoprotein {Hydrozoa (Obelia l | 98.78 | |
| d2scpa_ | 174 | Sarcoplasmic calcium-binding protein {Sandworm (Ne | 98.77 | |
| d1uhka1 | 187 | Calcium-regulated photoprotein {Jellyfish (Aequore | 98.76 | |
| d1xk4a1 | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 98.76 | |
| d1iq3a_ | 110 | Pob1 {Human (Homo sapiens) [TaxId: 9606]} | 98.75 | |
| d1e8aa_ | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 98.74 | |
| d1psra_ | 100 | Calcyclin (S100) {Human (Homo sapiens), psoriasin | 98.74 | |
| d1nyaa_ | 176 | Calerythrin {Saccharopolyspora erythraea [TaxId: 1 | 98.72 | |
| d2hf5a1 | 33 | Troponin C {Human (Homo sapiens), cardiac isoform | 98.69 | |
| d2zkmx1 | 170 | Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI | 98.66 | |
| d1snla_ | 99 | Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax | 98.66 | |
| d1qjta_ | 99 | Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | 98.65 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.58 | |
| d3cr5x1 | 90 | Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: | 98.53 | |
| d1ij5a_ | 321 | Cbp40 (plasmodial specific CaII-binding protein LA | 98.48 | |
| d3cr5x1 | 90 | Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: | 98.42 | |
| d1qlsa_ | 95 | Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1 | 98.38 | |
| d1ctda_ | 34 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 98.36 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 98.35 | |
| d1qlsa_ | 95 | Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1 | 98.31 | |
| d1j55a_ | 94 | Calcyclin (S100) {Human (Homo sapiens), s100p [Tax | 98.29 | |
| d1xk4c1 | 83 | Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr | 98.24 | |
| d2hf5a1 | 33 | Troponin C {Human (Homo sapiens), cardiac isoform | 98.2 | |
| d1j55a_ | 94 | Calcyclin (S100) {Human (Homo sapiens), s100p [Tax | 98.17 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 98.1 | |
| d1xk4c1 | 83 | Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr | 98.0 | |
| d1ctda_ | 34 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 97.9 | |
| d1tuza_ | 118 | Diacylglycerol kinase alpha, N-terminal domain {Hu | 97.86 | |
| d1tuza_ | 118 | Diacylglycerol kinase alpha, N-terminal domain {Hu | 97.79 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 97.52 | |
| d1sraa_ | 151 | C-terminal (EC) domain of BM-40/SPARC/osteonectin | 97.14 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 96.98 | |
| d1sraa_ | 151 | C-terminal (EC) domain of BM-40/SPARC/osteonectin | 96.8 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 96.05 | |
| d1qasa1 | 94 | Phosphoinositide-specific phospholipase C, isozyme | 95.98 | |
| d1j7qa_ | 86 | Calcium vector protein {Amphioxus (Branchiostoma l | 95.57 | |
| d1qasa1 | 94 | Phosphoinositide-specific phospholipase C, isozyme | 92.74 | |
| d1h8ba_ | 73 | alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]} | 92.65 | |
| d1j7qa_ | 86 | Calcium vector protein {Amphioxus (Branchiostoma l | 91.76 | |
| d2cclb1 | 59 | Endo-1,4-beta-xylanase Y {Clostridium thermocellum | 90.28 | |
| d1eg3a1 | 125 | Dystrophin {Human (Homo sapiens) [TaxId: 9606]} | 87.8 | |
| d2cclb1 | 59 | Endo-1,4-beta-xylanase Y {Clostridium thermocellum | 86.41 | |
| d1pula1 | 103 | Hypothetical protein c32e8.3 {Caenorhabditis elega | 86.25 | |
| d1wlma1 | 138 | Protein cgi-38 {Mouse (Mus musculus) [TaxId: 10090 | 85.44 | |
| d1eg3a2 | 97 | Dystrophin {Human (Homo sapiens) [TaxId: 9606]} | 85.23 | |
| d1dava_ | 71 | Cellulosome endoglucanase SS {Clostridium thermoce | 85.0 | |
| d1dava_ | 71 | Cellulosome endoglucanase SS {Clostridium thermoce | 83.64 | |
| d2b59b1 | 60 | Cellulosomal scaffolding protein A {Clostridium th | 83.28 |
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=8e-62 Score=467.10 Aligned_cols=291 Identities=41% Similarity=0.736 Sum_probs=236.2
Q ss_pred cccccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 010013 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (520)
Q Consensus 61 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~ 140 (520)
..+++.+.|.+++.||+|+||+||+|.++.+|+.||||++.+..... ..+.+.+|+.+|++++ |||||++++++.++
T Consensus 3 ~~edi~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~--~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~ 79 (307)
T d1a06a_ 3 QAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEG--KEGSMENEIAVLHKIK-HPNIVALDDIYESG 79 (307)
T ss_dssp ECSCGGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC------------CHHHHHHHTCC-CTTBCCEEEEEECS
T ss_pred CCCCCccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhh--HHHHHHHHHHHHHhCC-CCCCCcEEEEEEEC
Confidence 34678889999999999999999999999999999999997654322 2356889999999998 99999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccc
Q 010013 141 HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (520)
Q Consensus 141 ~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 220 (520)
+.+|+|||||+||+|.+++.+.+.+++..+..++.||+.||.|||++||+||||||+|||+...++++.+||+|||+|+.
T Consensus 80 ~~~~lvmE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~ 159 (307)
T d1a06a_ 80 GHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 159 (307)
T ss_dssp SEEEEEECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC-----
T ss_pred CEEEEEEeccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEE
Confidence 99999999999999999999988999999999999999999999999999999999999998766778999999999998
Q ss_pred cCCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHH
Q 010013 221 FKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (520)
Q Consensus 221 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (520)
..........+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+......++...++.+|++
T Consensus 160 ~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 239 (307)
T d1a06a_ 160 EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDS 239 (307)
T ss_dssp -------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCTTTTTTSCHH
T ss_pred ccCCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCccccCCCHH
Confidence 766666667789999999999875 5899999999999999999999999999999999999998888877777899999
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHcCCccccCCCCCCCcccHHHHHHHHHHHhhhHH
Q 010013 300 AKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKL 355 (520)
Q Consensus 300 ~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 355 (520)
+.+||.+||..||++|||+.|+|+||||+..... .+.....+..+++++...+++
T Consensus 240 ~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 294 (307)
T d1a06a_ 240 AKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTAL-DKNIHQSVSEQIKKNFAKSKW 294 (307)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHHSTTTTSSCCC-CCCCHHHHHHHHHHHSCCCTT
T ss_pred HHHHHHHHccCCHhHCcCHHHHhcCHhhCCCCcc-ccccchhHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999864332 333444444455554443333
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-60 Score=448.15 Aligned_cols=255 Identities=33% Similarity=0.613 Sum_probs=231.5
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
-++|.+++.||+|+||+||+|+++.+++.||+|++.+.........+.+.+|+.++++++ |||||++++++.+++.+|+
T Consensus 5 l~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~~~i 83 (263)
T d2j4za1 5 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYL 83 (263)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEEE
T ss_pred hhHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcC-CCCCCeEEEEEEECCEEEE
Confidence 367999999999999999999999999999999997655444455678999999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
|||||+||+|.+++.+.+.+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+|......
T Consensus 84 vmEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~---~~~~~kl~DFG~a~~~~~~- 159 (263)
T d2j4za1 84 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSVHAPSS- 159 (263)
T ss_dssp EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEECCCCSCSCCCCC-
T ss_pred EEeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceec---CCCCEeecccceeeecCCC-
Confidence 999999999999999988999999999999999999999999999999999999994 5678999999999876543
Q ss_pred cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Q 010013 226 VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (520)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (520)
......||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+....+.+....++ +.+|+++++||
T Consensus 160 ~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li 235 (263)
T d2j4za1 160 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLI 235 (263)
T ss_dssp CCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCC----TTSCHHHHHHH
T ss_pred cccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC----ccCCHHHHHHH
Confidence 3355689999999999975 489999999999999999999999999999999998888776554 36799999999
Q ss_pred HHhcccCCCCCCCHHHHHcCCcccc
Q 010013 305 KKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 305 ~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
.+||+.||++|||++|+|+||||+.
T Consensus 236 ~~~L~~dp~~R~t~~eil~hp~~~~ 260 (263)
T d2j4za1 236 SRLLKHNPSQRPMLREVLEHPWITA 260 (263)
T ss_dssp HHHTCSSGGGSCCHHHHHTCHHHHH
T ss_pred HHHccCCHhHCcCHHHHHcCcCcCC
Confidence 9999999999999999999999974
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.7e-60 Score=443.91 Aligned_cols=258 Identities=29% Similarity=0.565 Sum_probs=218.0
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.++|.+++.||+|+||+||+|+++.+|+.||||++..... ....+.+.+|+.+|++++ |||||++++++.+++.+|+
T Consensus 4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~--~~~~~~~~~Ei~~l~~l~-HpnIv~~~~~~~~~~~~~i 80 (271)
T d1nvra_ 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLN-HENVVKFYGHRREGNIQYL 80 (271)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHTCC-CTTBCCEEEEEEETTEEEE
T ss_pred CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhc--chHHHHHHHHHHHHHhCC-CCCEeeEeeeeccCceeEE
Confidence 4679999999999999999999999999999999975432 223456899999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
|||||+||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+|+......
T Consensus 81 vmEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~---~~~~~KL~DFG~a~~~~~~~ 157 (271)
T d1nvra_ 81 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLATVFRYNN 157 (271)
T ss_dssp EEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC---TTCCEEECCCTTCEECEETT
T ss_pred EEeccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEEC---CCCCEEEccchhheeeccCC
Confidence 999999999999998888899999999999999999999999999999999999994 56779999999998764332
Q ss_pred ---cccccccCCCccCchhhccc--CCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHH
Q 010013 226 ---VFKDLVGSAYYVAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300 (520)
Q Consensus 226 ---~~~~~~gt~~y~aPE~~~~~--~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (520)
.....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.................. ....++.+++++
T Consensus 158 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~ 236 (271)
T d1nvra_ 158 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT-YLNPWKKIDSAP 236 (271)
T ss_dssp EECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCT-TSTTGGGSCHHH
T ss_pred ccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCC-CCCccccCCHHH
Confidence 23456899999999998653 467899999999999999999999776543322222222222 223456889999
Q ss_pred HHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 301 KDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 301 ~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
.+||.+||+.||++|||++|+|+||||+..
T Consensus 237 ~~li~~~L~~dP~~R~t~~eil~hpwf~~~ 266 (271)
T d1nvra_ 237 LALLHKILVENPSARITIPDIKKDRWYNKP 266 (271)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred HHHHHHHcCCChhHCcCHHHHhcCHhhCcC
Confidence 999999999999999999999999999753
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-59 Score=446.66 Aligned_cols=266 Identities=39% Similarity=0.677 Sum_probs=240.5
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCC---cccHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN---RDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~---~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~ 139 (520)
+++.++|.+++.||+|+||+||+|+++.+|+.||||++.+..... ....+.+.+|+.+|++++ |||||++++++.+
T Consensus 6 ~~i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~ 84 (293)
T d1jksa_ 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLHEVYEN 84 (293)
T ss_dssp SCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCC-CTTBCCEEEEEEC
T ss_pred CCcccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCC-CCCCCcEEEEEEE
Confidence 456788999999999999999999999999999999997654322 234678999999999998 9999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCC-CCCeeEeecccc
Q 010013 140 RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAE-DSPLKATDFGLS 218 (520)
Q Consensus 140 ~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~-~~~~kl~Dfg~a 218 (520)
.+.+|+|||||+||+|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++..+. ...+||+|||+|
T Consensus 85 ~~~~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a 164 (293)
T d1jksa_ 85 KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164 (293)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred CCEEEEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhh
Confidence 9999999999999999999998889999999999999999999999999999999999999975432 346999999999
Q ss_pred cccCCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 010013 219 VFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (520)
Q Consensus 219 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (520)
.....+.......||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+....+......++...++.+|
T Consensus 165 ~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s 244 (293)
T d1jksa_ 165 HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 244 (293)
T ss_dssp EECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSC
T ss_pred hhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCchhcCCCC
Confidence 98876666667789999999999875 58999999999999999999999999999999999998888777665567899
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHcCCcccc
Q 010013 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 298 ~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
..+++||.+||..||++|||++|+|+||||+.
T Consensus 245 ~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~ 276 (293)
T d1jksa_ 245 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 276 (293)
T ss_dssp HHHHHHHHTTSCSSGGGSCCHHHHHHSTTTCC
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhcCcccCC
Confidence 99999999999999999999999999999974
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-58 Score=441.35 Aligned_cols=256 Identities=28% Similarity=0.491 Sum_probs=224.7
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.++|.+.+.||+|+||+||+|.++.+|+.||||++..... ...+.+.+|+.++++++ |||||++++++.+++.+|+
T Consensus 19 ~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~i 94 (293)
T d1yhwa1 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMRENK-NPNIVNYLDSYLVGDELWV 94 (293)
T ss_dssp TTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGC---SCHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEEE
T ss_pred ccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccC---hHHHHHHHHHHHHHhCC-CCCEeeEeEEEEECCEEEE
Confidence 4679999999999999999999999999999999875432 33577999999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
|||||+||+|.+++.+ +.+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+|+.+....
T Consensus 95 vmEy~~gg~L~~~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~---~~~~vkl~DFG~a~~~~~~~ 170 (293)
T d1yhwa1 95 VMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG---MDGSVKLTDFGFCAQITPEQ 170 (293)
T ss_dssp EEECCTTCBHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTCEECCSTT
T ss_pred EEEecCCCcHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEEC---CCCcEeeccchhheeecccc
Confidence 9999999999987655 5799999999999999999999999999999999999994 56789999999999875433
Q ss_pred -cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHH
Q 010013 226 -VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303 (520)
Q Consensus 226 -~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 303 (520)
.....+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+....... ...++.+++.+++|
T Consensus 171 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~l 249 (293)
T d1yhwa1 171 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPE-LQNPEKLSAIFRDF 249 (293)
T ss_dssp CCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCC-CSSGGGSCHHHHHH
T ss_pred ccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCC-CCCcccCCHHHHHH
Confidence 3456689999999999875 48999999999999999999999999988777666665543321 12335789999999
Q ss_pred HHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 304 VKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 304 i~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
|.+||..||++|||+.|+|+||||+..
T Consensus 250 i~~~L~~dP~~R~s~~eil~Hp~~~~~ 276 (293)
T d1yhwa1 250 LNRCLDMDVEKRGSAKELLQHQFLKIA 276 (293)
T ss_dssp HHHHTCSSTTTSCCHHHHTTCGGGGGC
T ss_pred HHHHccCChhHCcCHHHHhcCHhhCCC
Confidence 999999999999999999999999854
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.3e-59 Score=442.83 Aligned_cols=256 Identities=32% Similarity=0.600 Sum_probs=228.5
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+++.||+|+||+||+|.++.+|+.||||++.+.........+.+.+|+++|++++ ||||+++++++.+++.+|+|
T Consensus 8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~~iv 86 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFG 86 (288)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCC-STTBCCEEEEEECSSEEEEE
T ss_pred CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcC-CCCeeEEEEEEEECCEEEEE
Confidence 67999999999999999999999999999999997655444456678999999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC-
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~- 225 (520)
||||+||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|+.+....
T Consensus 87 mEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll---~~~~~vkl~DFG~a~~~~~~~~ 163 (288)
T d1uu3a_ 87 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESK 163 (288)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEECCCTTCEECC----
T ss_pred EEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCcccccc---CCCceEEecccccceecccCCc
Confidence 9999999999999999999999999999999999999999999999999999999 456789999999998764322
Q ss_pred --cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHH
Q 010013 226 --VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (520)
Q Consensus 226 --~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (520)
.....+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..++...+.+....++ ..+++++++
T Consensus 164 ~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~ 239 (288)
T d1uu3a_ 164 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARD 239 (288)
T ss_dssp ------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCC----TTCCHHHHH
T ss_pred ccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCCCCCC----ccCCHHHHH
Confidence 2345689999999999875 589999999999999999999999999999999999988776554 368999999
Q ss_pred HHHHhcccCCCCCCCHHH------HHcCCccccC
Q 010013 303 IVKKMLHADPKERLSAAE------VLNHPWMRVD 330 (520)
Q Consensus 303 li~~~l~~dp~~Rps~~~------~l~~~~~~~~ 330 (520)
||.+||..||++|||++| +++||||+..
T Consensus 240 li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i 273 (288)
T d1uu3a_ 240 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 273 (288)
T ss_dssp HHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred HHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCC
Confidence 999999999999999988 5889999753
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=2e-58 Score=451.21 Aligned_cols=262 Identities=35% Similarity=0.634 Sum_probs=238.1
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
+.+.|.+++.||+|+||.||+|.++.+|+.||||++.... ....+.+.+|+.+|+++. |||||++++++.+++.+|
T Consensus 27 ~~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~~~~Ei~il~~l~-HpnIv~~~~~~~~~~~~~ 102 (352)
T d1koba_ 27 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY---PLDKYTVKNEISIMNQLH-HPKLINLHDAFEDKYEMV 102 (352)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTCC-STTBCCEEEEEECSSEEE
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcc---hhHHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCEEE
Confidence 4567999999999999999999999999999999986532 233567889999999998 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 145 LIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
+|||||+||+|.+.+...+ ++++..++.++.||+.||.|||++||+||||||+|||++. ..++.+||+|||+|.....
T Consensus 103 ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~-~~~~~vkL~DFGla~~~~~ 181 (352)
T d1koba_ 103 LILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET-KKASSVKIIDFGLATKLNP 181 (352)
T ss_dssp EEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-TTCCCEEECCCTTCEECCT
T ss_pred EEEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccc-cCCCeEEEeecccceecCC
Confidence 9999999999998876654 6999999999999999999999999999999999999964 2457899999999999877
Q ss_pred CCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHH
Q 010013 224 GDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302 (520)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (520)
........||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+.+..+......++...++.+|+++.+
T Consensus 182 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 261 (352)
T d1koba_ 182 DEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKD 261 (352)
T ss_dssp TSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHH
T ss_pred CCceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHH
Confidence 766677789999999999875 4899999999999999999999999999999999999998888887778899999999
Q ss_pred HHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 303 IVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 303 li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
||.+||+.||++|||+.|+|+||||+...
T Consensus 262 li~~~L~~dp~~R~s~~eil~Hp~~~~~~ 290 (352)
T d1koba_ 262 FIKNLLQKEPRKRLTVHDALEHPWLKGDH 290 (352)
T ss_dssp HHHTTSCSSGGGSCCHHHHHTSTTTSSCC
T ss_pred HHHHHccCChhHCcCHHHHhcCHhhCCCc
Confidence 99999999999999999999999998654
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-58 Score=434.37 Aligned_cols=255 Identities=22% Similarity=0.432 Sum_probs=220.3
Q ss_pred cce-eecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe----CC
Q 010013 67 NTY-IFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED----RH 141 (520)
Q Consensus 67 ~~y-~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~----~~ 141 (520)
++| ++.+.||+|+||+||+|.++.+++.||+|++..... .....+.+.+|+++|++++ |||||++++++.+ ..
T Consensus 8 gry~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~-~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~~ 85 (270)
T d1t4ha_ 8 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQ-HPNIVRFYDSWESTVKGKK 85 (270)
T ss_dssp SCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEEESSSCE
T ss_pred CCEEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhC-CHHHHHHHHHHHHHHHhCC-CCCeeeEEEEEeeccccCC
Confidence 344 778899999999999999999999999999876543 4445678999999999998 9999999999875 45
Q ss_pred eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcC--CeeecCCCCcEEeecCCCCCCeeEeeccccc
Q 010013 142 SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG--VMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~ 219 (520)
.+|+|||||+||+|.+++.+.+.+++..+..++.||+.||.|||++| |+||||||+|||++ ++++.+||+|||+|+
T Consensus 86 ~~~ivmE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~--~~~~~~Kl~DFGla~ 163 (270)
T d1t4ha_ 86 CIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT--GPTGSVKIGDLGLAT 163 (270)
T ss_dssp EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEES--STTSCEEECCTTGGG
T ss_pred EEEEEEeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceee--CCCCCEEEeecCcce
Confidence 68999999999999999999889999999999999999999999998 99999999999995 346689999999998
Q ss_pred ccCCCCcccccccCCCccCchhhcccCCCcchhHHHHHHHHHHhhCCCCCCCCC-HHHHHHHHHcCCCCCCCCCCCCCCH
Q 010013 220 FFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWSAGVILYILLSGVPPFWGET-EQSIFDAILRGHIDFSSDPWPNISS 298 (520)
Q Consensus 220 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (520)
..... .....+||+.|+|||++.+.++.++|||||||++|+|++|+.||.+.. ...+...+..+..+. .....+++
T Consensus 164 ~~~~~-~~~~~~GT~~Y~aPE~~~~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~~--~~~~~~~~ 240 (270)
T d1t4ha_ 164 LKRAS-FAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPA--SFDKVAIP 240 (270)
T ss_dssp GCCTT-SBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCG--GGGGCCCH
T ss_pred eccCC-ccCCcccCccccCHHHhCCCCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCCc--ccCccCCH
Confidence 65433 345678999999999999889999999999999999999999997654 445555555543322 12346789
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHcCCccc
Q 010013 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (520)
Q Consensus 299 ~~~~li~~~l~~dp~~Rps~~~~l~~~~~~ 328 (520)
++.+||.+||..||++|||++|+|+||||+
T Consensus 241 ~~~~li~~~l~~dp~~R~s~~ell~Hp~fk 270 (270)
T d1t4ha_ 241 EVKEIIEGCIRQNKDERYSIKDLLNHAFFQ 270 (270)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred HHHHHHHHHccCCHhHCcCHHHHhCCcccC
Confidence 999999999999999999999999999996
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=2.3e-58 Score=450.49 Aligned_cols=263 Identities=35% Similarity=0.627 Sum_probs=238.1
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
.+.++|.+++.||+|+||.||+|.++.+|+.||||++.... ....+.+.+|+.+|++++ |||||++++++.+++.+
T Consensus 23 ~il~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~---~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~ 98 (350)
T d1koaa2 23 HVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQTMSVLR-HPTLVNLHDAFEDDNEM 98 (350)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCS---HHHHHHHHHHHHHHHHTC-CTTBCCEEEEEEETTEE
T ss_pred CCccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccc---hhhHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCEE
Confidence 34578999999999999999999999999999999986532 234577899999999998 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 144 NLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
|+|||||+||+|.+++.+ .+++++..+..++.||+.||.|||++||+||||||+|||+.. +.++.+||+|||+|+.+.
T Consensus 99 ~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~-~~~~~vkL~DFG~a~~~~ 177 (350)
T d1koaa2 99 VMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT-KRSNELKLIDFGLTAHLD 177 (350)
T ss_dssp EEEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-TTSCCEEECCCTTCEECC
T ss_pred EEEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeecc-CCCCeEEEeecchheecc
Confidence 999999999999999854 467999999999999999999999999999999999999964 235689999999999887
Q ss_pred CCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHH
Q 010013 223 PGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (520)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (520)
.........||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..+.+..+......++...++.++++++
T Consensus 178 ~~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 257 (350)
T d1koaa2 178 PKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGK 257 (350)
T ss_dssp TTSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGGGGGCCHHHH
T ss_pred cccccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHH
Confidence 6666667889999999999875 488999999999999999999999999999999999998888777777778999999
Q ss_pred HHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 302 DIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 302 ~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
+||.+||+.||++|||++|+|+||||+...
T Consensus 258 ~li~~~L~~dP~~R~t~~eil~hp~~~~~~ 287 (350)
T d1koaa2 258 DFIRKLLLADPNTRMTIHQALEHPWLTPGN 287 (350)
T ss_dssp HHHHHHCCSSGGGSCCHHHHHHSTTTSCTT
T ss_pred HHHHHHccCChhHCcCHHHHhcCcccCCCC
Confidence 999999999999999999999999998543
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=5.8e-58 Score=433.50 Aligned_cols=261 Identities=36% Similarity=0.667 Sum_probs=237.5
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcc------cHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRD------DVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~------~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~ 139 (520)
.++|.+.+.||+|+||+||+|+++.+|+.||||++.+....... ..+.+.+|+.+++++..||||+++++++.+
T Consensus 2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 81 (277)
T d1phka_ 2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 81 (277)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeccc
Confidence 47899999999999999999999999999999999765433221 235688999999999889999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccc
Q 010013 140 RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (520)
Q Consensus 140 ~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~ 219 (520)
++.+|+|||||+||+|.+++...+++++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++
T Consensus 82 ~~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill---~~~~~~kl~DFG~a~ 158 (277)
T d1phka_ 82 NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL---DDDMNIKLTDFGFSC 158 (277)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTTCE
T ss_pred CcceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEE---cCCCCeEEccchhee
Confidence 99999999999999999999998999999999999999999999999999999999999999 467789999999999
Q ss_pred ccCCCCcccccccCCCccCchhhcc-------cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCC
Q 010013 220 FFKPGDVFKDLVGSAYYVAPEVLRR-------NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292 (520)
Q Consensus 220 ~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 292 (520)
.+..........||+.|+|||.+.+ .++.++||||+||++|+|++|+.||.+.........+..+...++...
T Consensus 159 ~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~ 238 (277)
T d1phka_ 159 QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE 238 (277)
T ss_dssp ECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTT
T ss_pred EccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCCCCcc
Confidence 8876666667789999999998752 367899999999999999999999999999999999998888777777
Q ss_pred CCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcccc
Q 010013 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 293 ~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
++.+|+++++||.+||.+||++|||++|+|+||||+.
T Consensus 239 ~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~~ 275 (277)
T d1phka_ 239 WDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 275 (277)
T ss_dssp GGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCT
T ss_pred cccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHHHH
Confidence 7899999999999999999999999999999999974
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-58 Score=438.56 Aligned_cols=257 Identities=29% Similarity=0.508 Sum_probs=225.4
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.+.|++++.||+|+||+||+|+++.+|+.||+|++... .....+.+.+|+++|++++ |||||++++++.+++.+++
T Consensus 11 ~d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~---~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~~l 86 (288)
T d2jfla1 11 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILASCD-HPNIVKLLDAFYYENNLWI 86 (288)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS---SSGGGGGTHHHHHHHHHCC-CTTBCCEEEEEEETTEEEE
T ss_pred ccCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcC---CHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEeeCCeEEE
Confidence 35799999999999999999999999999999998654 2345677889999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 146 IMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
|||||+||+|.+++.+ .+++++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+|......
T Consensus 87 vmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~---~~~~~Kl~DFG~a~~~~~~ 163 (288)
T d2jfla1 87 LIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFT---LDGDIKLADFGVSAKNTRT 163 (288)
T ss_dssp EEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTCEECHHH
T ss_pred EEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeEC---CCCCEEEEechhhhccCCC
Confidence 9999999999998765 45799999999999999999999999999999999999994 5678999999999765322
Q ss_pred -CcccccccCCCccCchhhc------ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 010013 225 -DVFKDLVGSAYYVAPEVLR------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (520)
Q Consensus 225 -~~~~~~~gt~~y~aPE~~~------~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (520)
.......||+.|+|||++. ..++.++|||||||++|+|++|..||.+....+.+..+..+..+... ....+|
T Consensus 164 ~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~~-~~~~~s 242 (288)
T d2jfla1 164 IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLA-QPSRWS 242 (288)
T ss_dssp HHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCCS-SGGGSC
T ss_pred cccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCC-ccccCC
Confidence 1234568999999999873 34789999999999999999999999998888888888776544322 235789
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 298 ~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
+++.+||.+||+.||++|||+.|+|+||||+..
T Consensus 243 ~~~~~li~~~L~~dp~~R~t~~ell~hp~~~~~ 275 (288)
T d2jfla1 243 SNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD 275 (288)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHTTSGGGCCC
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence 999999999999999999999999999999753
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=3.2e-58 Score=441.92 Aligned_cols=256 Identities=26% Similarity=0.446 Sum_probs=227.9
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
...|.+.+.||+|+||+||+|+++.+|+.||||++...........+.+.+|+.+|++++ |||||++++++.+++.+|+
T Consensus 14 ~~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~~~~~~~~~~~~~i 92 (309)
T d1u5ra_ 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQYRGCYLREHTAWL 92 (309)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEETTEEEE
T ss_pred HHhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCC-CCCEeeEEEEEEECCEEEE
Confidence 456999999999999999999999999999999997665544555678999999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 146 IMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
|||||.||+|..++...+++++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+|......
T Consensus 93 v~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~---~~~~~Kl~DFG~a~~~~~~- 168 (309)
T d1u5ra_ 93 VMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS---EPGLVKLGDFGSASIMAPA- 168 (309)
T ss_dssp EEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEE---TTTEEEECCCTTCBSSSSB-
T ss_pred EEEecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEC---CCCCEEEeecccccccCCC-
Confidence 999999999988788888999999999999999999999999999999999999995 5678999999999876432
Q ss_pred cccccccCCCccCchhhc----ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHH
Q 010013 226 VFKDLVGSAYYVAPEVLR----RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (520)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~----~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (520)
....||+.|+|||++. +.|+.++|||||||++|+|++|..||.+....+....+..+..+... ...+|+.+.
T Consensus 169 --~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~~~--~~~~s~~~~ 244 (309)
T d1u5ra_ 169 --NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQ--SGHWSEYFR 244 (309)
T ss_dssp --CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCS--CTTSCHHHH
T ss_pred --CccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCC--CCCCCHHHH
Confidence 4568999999999984 34889999999999999999999999998888877777766544332 246899999
Q ss_pred HHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 302 DIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 302 ~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
+||.+||+.||++|||++|+|+||||...
T Consensus 245 ~li~~~L~~dP~~Rpt~~ell~Hp~~~~~ 273 (309)
T d1u5ra_ 245 NFVDSCLQKIPQDRPTSEVLLKHRFVLRE 273 (309)
T ss_dssp HHHHHHTCSSGGGSCCHHHHTTCHHHHSC
T ss_pred HHHHHHCcCChhHCcCHHHHHhCHHhcCC
Confidence 99999999999999999999999999754
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-57 Score=441.36 Aligned_cols=255 Identities=32% Similarity=0.592 Sum_probs=232.8
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+++.||+|+||.||+|+++.+|+.||||++.+.........+.+.+|+.+|++++ ||||+++++++.+.+.+|+|
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~~~~iv 83 (337)
T d1o6la_ 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR-HPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCC-CTTBCCEEEEEECSSEEEEE
T ss_pred HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCC-CCCEEEEEeeeccccccccc
Confidence 57999999999999999999999999999999998665444556788999999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC-CC
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-GD 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~-~~ 225 (520)
||||+||+|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|+.... ..
T Consensus 84 ~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl---~~~g~vkl~DFG~a~~~~~~~~ 160 (337)
T d1o6la_ 84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCSCCTTC
T ss_pred eeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEe---cCCCCEEEeecccccccccCCc
Confidence 9999999999999999999999999999999999999999999999999999999 4567899999999987643 33
Q ss_pred cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Q 010013 226 VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (520)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (520)
.....+||+.|+|||++.+ .|+.++|||||||++|+|++|++||.+.+..++...+..+...++ ..+|+++++||
T Consensus 161 ~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~dli 236 (337)
T d1o6la_ 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP----RTLSPEAKSLL 236 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHHH
T ss_pred ccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCCCCCC----ccCCHHHHHHH
Confidence 4556789999999999864 599999999999999999999999999999999999988876654 46899999999
Q ss_pred HHhcccCCCCCCC-----HHHHHcCCcccc
Q 010013 305 KKMLHADPKERLS-----AAEVLNHPWMRV 329 (520)
Q Consensus 305 ~~~l~~dp~~Rps-----~~~~l~~~~~~~ 329 (520)
.+||++||++|++ +.|+++||||+.
T Consensus 237 ~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~ 266 (337)
T d1o6la_ 237 AGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266 (337)
T ss_dssp HHHTCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred HhhccCCchhhcccccccHHHHHcCccccc
Confidence 9999999999994 899999999974
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.9e-58 Score=430.32 Aligned_cols=254 Identities=27% Similarity=0.494 Sum_probs=213.1
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe--CCeE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED--RHSV 143 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~--~~~~ 143 (520)
.++|.+.+.||+|+||+||+|+++.+|+.||+|++..... .....+.+.+|++++++++ |||||++++++.+ .+.+
T Consensus 3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~~ 80 (269)
T d2java1 3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLRELK-HPNIVRYYDRIIDRTNTTL 80 (269)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTS-CHHHHHHHHHHHHHTTSCC-CTTBCCEEEEEEC----CE
T ss_pred chhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhC-CHHHHHHHHHHHHHHHHCC-CCCEeeEEEEEEeCCCCEE
Confidence 3679999999999999999999999999999999976543 4445677999999999998 9999999999864 4668
Q ss_pred EEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcC-----CeeecCCCCcEEeecCCCCCCeeEee
Q 010013 144 NLIMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSMG-----VMHRDLKPENFLFSSSAEDSPLKATD 214 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~----~~~l~~~~~~~i~~qi~~~l~~LH~~~-----ivH~Dlkp~NIll~~~~~~~~~kl~D 214 (520)
|+|||||+||+|.+++.+ .+.+++..++.++.||+.||.|||++| |+||||||+|||++ .++.+||+|
T Consensus 81 ~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~---~~~~vkl~D 157 (269)
T d2java1 81 YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD---GKQNVKLGD 157 (269)
T ss_dssp EEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEEC---TTSCEEECC
T ss_pred EEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcC---CCCcEEEee
Confidence 999999999999998854 457999999999999999999999976 99999999999994 567899999
Q ss_pred cccccccCCCC-cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCC
Q 010013 215 FGLSVFFKPGD-VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292 (520)
Q Consensus 215 fg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 292 (520)
||+|+.+.... ......||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..++...+..+.....
T Consensus 158 FG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~~~~~--- 234 (269)
T d2java1 158 FGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRI--- 234 (269)
T ss_dssp HHHHHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCC---
T ss_pred ccceeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC---
Confidence 99999875433 3345789999999999865 589999999999999999999999999999888888887765422
Q ss_pred CCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcc
Q 010013 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327 (520)
Q Consensus 293 ~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~ 327 (520)
...+|+++.+||.+||+.||++|||+.|+|+|||+
T Consensus 235 ~~~~s~~l~~li~~~L~~dp~~Rps~~ell~hp~i 269 (269)
T d2java1 235 PYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 269 (269)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred CcccCHHHHHHHHHHcCCChhHCcCHHHHHhCCcC
Confidence 24689999999999999999999999999999995
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-57 Score=441.01 Aligned_cols=261 Identities=31% Similarity=0.631 Sum_probs=237.0
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
++.++|.+++.||+|+||+||+|.++.+|+.||+|++.... .....+.+|+++|++++ |||||++++++++.+.+
T Consensus 2 ~~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~----~~~~~~~~Ei~il~~l~-HpnIv~~~~~~~~~~~~ 76 (321)
T d1tkia_ 2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG----TDQVLVKKEISILNIAR-HRNILHLHESFESMEEL 76 (321)
T ss_dssp CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT----HHHHHHHHHHHHHHHSC-CTTBCCEEEEEEETTEE
T ss_pred CCccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc----ccHHHHHHHHHHHHhCC-CCCCCeEEEEEEECCEE
Confidence 45688999999999999999999999999999999996543 23356889999999998 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 144 NLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
|+|||||+||+|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||++. +....+||+|||++....
T Consensus 77 ~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~-~~~~~ikl~DFG~~~~~~ 155 (321)
T d1tkia_ 77 VMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQT-RRSSTIKIIEFGQARQLK 155 (321)
T ss_dssp EEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-SSCCCEEECCCTTCEECC
T ss_pred EEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecC-CCceEEEEcccchhhccc
Confidence 99999999999999997765 7999999999999999999999999999999999999964 235679999999999887
Q ss_pred CCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHH
Q 010013 223 PGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (520)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (520)
.........||+.|+|||.+.+ .++.++|||||||++|+|++|..||.+....+.+..+.+....++...++.+|++++
T Consensus 156 ~~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 235 (321)
T d1tkia_ 156 PGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAM 235 (321)
T ss_dssp TTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHH
T ss_pred cCCcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCChhhccCCCHHHH
Confidence 6666667789999999998864 489999999999999999999999999999999999999888877766778999999
Q ss_pred HHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 302 DIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 302 ~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
+||.+||..||++|||+.|+|+||||+..
T Consensus 236 ~li~~~L~~dp~~R~s~~eil~hp~~~~~ 264 (321)
T d1tkia_ 236 DFVDRLLVKERKSRMTASEALQHPWLKQK 264 (321)
T ss_dssp HHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred HHHHHHccCChhHCcCHHHHhcCHhhccC
Confidence 99999999999999999999999999753
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=4.5e-57 Score=435.67 Aligned_cols=254 Identities=29% Similarity=0.585 Sum_probs=231.2
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+++.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|+.++++++ |||||++++++.+.+.+|+|
T Consensus 4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~iv 82 (316)
T d1fota_ 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT-HPFIIRMWGTFQDAQQIFMI 82 (316)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCC-BTTBCCEEEEEECSSEEEEE
T ss_pred hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhcc-CcChhheeeeEeeCCeeeeE
Confidence 56999999999999999999999999999999997654444455788999999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCc
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 226 (520)
||||.||+|..++.....+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|+.....
T Consensus 83 mE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl---~~~g~vkL~DFG~a~~~~~~-- 157 (316)
T d1fota_ 83 MDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL---DKNGHIKITDFGFAKYVPDV-- 157 (316)
T ss_dssp ECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEE---CTTSCEEECCCSSCEECSSC--
T ss_pred eeecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeE---cCCCCEEEecCccceEeccc--
Confidence 9999999999999999999999999999999999999999999999999999999 45778999999999986533
Q ss_pred ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHH
Q 010013 227 FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305 (520)
Q Consensus 227 ~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 305 (520)
....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+....+..+...++ +.+++++.++|.
T Consensus 158 ~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li~ 233 (316)
T d1fota_ 158 TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP----PFFNEDVKDLLS 233 (316)
T ss_dssp BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHHHH
T ss_pred cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCC----CCCCHHHHHHHH
Confidence 345789999999999875 489999999999999999999999999999999999988766544 468999999999
Q ss_pred HhcccCCCCCC-----CHHHHHcCCccccC
Q 010013 306 KMLHADPKERL-----SAAEVLNHPWMRVD 330 (520)
Q Consensus 306 ~~l~~dp~~Rp-----s~~~~l~~~~~~~~ 330 (520)
+||..||.+|+ |++++|+||||+..
T Consensus 234 ~~L~~dp~~R~~~~r~t~~~il~Hp~f~~i 263 (316)
T d1fota_ 234 RLITRDLSQRLGNLQNGTEDVKNHPWFKEV 263 (316)
T ss_dssp HHTCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred HHhhhCHHhccccchhhHHHHHcCcccccC
Confidence 99999999996 99999999999753
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.9e-56 Score=437.14 Aligned_cols=254 Identities=30% Similarity=0.599 Sum_probs=230.9
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+++.||+|+||.||+|+++.+|+.||||++.+.........+.+.+|+.+|+++. |||||++++++.+...+++|
T Consensus 41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~~~~v 119 (350)
T d1rdqe_ 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEEE
T ss_pred cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcC-CCcEeecccccccccccccc
Confidence 68999999999999999999999999999999997655444456678999999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCc
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 226 (520)
|||+.||+|..++.+.+.+++..+..++.||+.||.|||++|||||||||+|||++ .++.+||+|||+|+.+...
T Consensus 120 ~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~---~~g~ikL~DFG~a~~~~~~-- 194 (350)
T d1rdqe_ 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGR-- 194 (350)
T ss_dssp EECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTCEECSSC--
T ss_pred cccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccC---CCCCEEeeeceeeeecccc--
Confidence 99999999999999989999999999999999999999999999999999999994 5678999999999987543
Q ss_pred ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHH
Q 010013 227 FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305 (520)
Q Consensus 227 ~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 305 (520)
.....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+.......+..+...++ ..+++++.+||.
T Consensus 195 ~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li~ 270 (350)
T d1rdqe_ 195 TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLR 270 (350)
T ss_dssp BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTCCHHHHHHHH
T ss_pred cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCCCCCC----ccCCHHHHHHHH
Confidence 345689999999999875 489999999999999999999999999999999999888766543 468999999999
Q ss_pred HhcccCCCCCC-----CHHHHHcCCccccC
Q 010013 306 KMLHADPKERL-----SAAEVLNHPWMRVD 330 (520)
Q Consensus 306 ~~l~~dp~~Rp-----s~~~~l~~~~~~~~ 330 (520)
+||..||.+|+ |++++|+||||+..
T Consensus 271 ~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~ 300 (350)
T d1rdqe_ 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300 (350)
T ss_dssp HHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred HHhhhCHHhccccccccHHHHHcCccccCC
Confidence 99999999995 99999999999743
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.9e-57 Score=436.86 Aligned_cols=257 Identities=26% Similarity=0.398 Sum_probs=216.2
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
..++|.+.+.||+|+||+||+|+++.+|+.||+|++.... .....+.+.+|+.+|++++ |||||+++++|.+.+.+|
T Consensus 4 ~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~--~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~ 80 (322)
T d1s9ja_ 4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECN-SPYIVGFYGAFYSDGEIS 80 (322)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCC--CTTHHHHHHHHGGGGGGCC-CTTBCCEEEEEECSSEEE
T ss_pred CccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhh--CHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCEEE
Confidence 4578999999999999999999999999999999986542 3344578899999999998 999999999999999999
Q ss_pred EEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
+|||||+||+|.+++.+.+.+++..+..++.||+.||.|||+ +||+||||||+|||+ +.++.+||+|||+|+....
T Consensus 81 iVmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl---~~~~~vkl~DFGla~~~~~ 157 (322)
T d1s9ja_ 81 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLID 157 (322)
T ss_dssp EEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEE---CTTCCEEECCCCCCHHHHH
T ss_pred EEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeE---CCCCCEEEeeCCCccccCC
Confidence 999999999999999998899999999999999999999997 599999999999999 4567899999999987643
Q ss_pred CCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHH------------------------
Q 010013 224 GDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIF------------------------ 278 (520)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~------------------------ 278 (520)
. .....+||+.|+|||++.+ .|+.++||||+||++|+|++|+.||.+.......
T Consensus 158 ~-~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (322)
T d1s9ja_ 158 S-MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 236 (322)
T ss_dssp H-TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC---------------------
T ss_pred C-ccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccccc
Confidence 2 2345689999999999875 5999999999999999999999999775432211
Q ss_pred ------------------HHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 279 ------------------DAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 279 ------------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
..+.... .+..+...++.++.+||.+||..||++|||++|+|+||||+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~~ 304 (322)
T d1s9ja_ 237 LSSYGMDSRPPMAIFELLDYIVNEP--PPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 304 (322)
T ss_dssp ---------CCCCHHHHHHHHHTSC--CCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHH
T ss_pred ccccccccccchhHHHHHhhhhccC--CccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCcC
Confidence 0011100 0111112468899999999999999999999999999999753
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.6e-57 Score=438.16 Aligned_cols=267 Identities=33% Similarity=0.646 Sum_probs=225.2
Q ss_pred ccccceeecc-eeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe---
Q 010013 64 DVRNTYIFGR-ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED--- 139 (520)
Q Consensus 64 ~~~~~y~~~~-~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~--- 139 (520)
.+.++|.+.+ .||+|+||+||+|.++.+++.||||++.. ...+.+|+.++.++.+|||||+++++|++
T Consensus 8 ~i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~--------~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~ 79 (335)
T d2ozaa1 8 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIVRIVDVYENLYA 79 (335)
T ss_dssp CGGGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC--------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEET
T ss_pred CcccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC--------cHHHHHHHHHHHHhcCCCCCCeEEEEEeeccc
Confidence 3557898875 59999999999999999999999999853 25678899998877669999999999876
Q ss_pred -CCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecc
Q 010013 140 -RHSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (520)
Q Consensus 140 -~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg 216 (520)
...+|+|||||+||+|.+++.+. .++++..++.++.||+.||.|||++||+||||||+|||++..+..+.+||+|||
T Consensus 80 ~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG 159 (335)
T d2ozaa1 80 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFG 159 (335)
T ss_dssp TEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCT
T ss_pred CCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccccc
Confidence 46799999999999999999874 369999999999999999999999999999999999999876667889999999
Q ss_pred cccccCCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHH----HHcCCCCCCCC
Q 010013 217 LSVFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDA----ILRGHIDFSSD 291 (520)
Q Consensus 217 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~----~~~~~~~~~~~ 291 (520)
+|+............||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+......... +......++..
T Consensus 160 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~ 239 (335)
T d2ozaa1 160 FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNP 239 (335)
T ss_dssp TCEECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTT
T ss_pred eeeeccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCc
Confidence 9998776666677889999999999875 589999999999999999999999987665443333 33344444444
Q ss_pred CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCCCCCCcc
Q 010013 292 PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338 (520)
Q Consensus 292 ~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~~~~~~~ 338 (520)
.+..+|+++.+||.+||+.||++|||+.|+|+||||.........+.
T Consensus 240 ~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~~~~~~~~ 286 (335)
T d2ozaa1 240 EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 286 (335)
T ss_dssp HHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHHTTTSSCCCEE
T ss_pred ccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHhhCCCCCCCCCc
Confidence 45578999999999999999999999999999999976554444433
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.4e-56 Score=428.92 Aligned_cols=256 Identities=28% Similarity=0.520 Sum_probs=227.4
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+++.||+|+||+||+|.++.+|+.||||++.+.........+.+..|..++.+..+|||||++++++.+++.+|+|
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv 81 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 81 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence 57999999999999999999999999999999997654434455667778888776433499999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC-C
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG-D 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~-~ 225 (520)
||||+||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++..... .
T Consensus 82 mEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~---~~~~~~kl~DFG~a~~~~~~~~ 158 (320)
T d1xjda_ 82 MEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDA 158 (320)
T ss_dssp EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCCCCTTC
T ss_pred EeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceee---cCCCceeccccchhhhcccccc
Confidence 9999999999999999999999999999999999999999999999999999999 45778999999999876433 3
Q ss_pred cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Q 010013 226 VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (520)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (520)
......||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..++...+..+.+.++ ..+|+.+.+||
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p----~~~s~~~~dli 234 (320)
T d1xjda_ 159 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP----RWLEKEAKDLL 234 (320)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHHH
T ss_pred cccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----ccCCHHHHHHH
Confidence 3445689999999999875 589999999999999999999999999999999998888766544 36799999999
Q ss_pred HHhcccCCCCCCCHH-HHHcCCcccc
Q 010013 305 KKMLHADPKERLSAA-EVLNHPWMRV 329 (520)
Q Consensus 305 ~~~l~~dp~~Rps~~-~~l~~~~~~~ 329 (520)
.+||..||++|||+. ++++||||+.
T Consensus 235 ~~~L~~dP~~R~s~~~~l~~hpff~~ 260 (320)
T d1xjda_ 235 VKLFVREPEKRLGVRGDIRQHPLFRE 260 (320)
T ss_dssp HHHSCSSGGGSBTTBSCGGGSGGGTT
T ss_pred HHhcccCCCCCcCHHHHHHhCchhcc
Confidence 999999999999995 8999999974
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=2.1e-55 Score=432.12 Aligned_cols=257 Identities=27% Similarity=0.435 Sum_probs=216.0
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHH---HHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE---VQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e---~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
++|.+++.||+|+||.||+|+++.+|+.||||++.+...........+.+| +.+++.+. |||||++++++.+.+.+
T Consensus 4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~-hpnIv~l~~~~~~~~~~ 82 (364)
T d1omwa3 4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD-CPFIVCMSYAFHTPDKL 82 (364)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSC-CTTBCCEEEEEECSSEE
T ss_pred HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCC-CCcEEEEEEEEEECCEE
Confidence 579999999999999999999999999999999875443333333344444 56666666 99999999999999999
Q ss_pred EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 144 NLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
|+|||||+||+|.+++.+...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|+....
T Consensus 83 ~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl---~~~g~iKl~DFGla~~~~~ 159 (364)
T d1omwa3 83 SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSK 159 (364)
T ss_dssp EEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CSSSCEEECCCTTCEECSS
T ss_pred EEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEE---cCCCcEEEeeeceeeecCC
Confidence 9999999999999999999999999999999999999999999999999999999999 4567899999999997754
Q ss_pred CCcccccccCCCccCchhhc-c-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHH
Q 010013 224 GDVFKDLVGSAYYVAPEVLR-R-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (520)
Q Consensus 224 ~~~~~~~~gt~~y~aPE~~~-~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (520)
.. .....||+.|+|||++. + .++.++|||||||++|+|++|+.||.+......... ...........+..+|++++
T Consensus 160 ~~-~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~ 237 (364)
T d1omwa3 160 KK-PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI-DRMTLTMAVELPDSFSPELR 237 (364)
T ss_dssp SC-CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHH-HHHSSSCCCCCCSSSCHHHH
T ss_pred Cc-ccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHhcccCCCCCCCCCCHHHH
Confidence 43 34568999999999985 3 489999999999999999999999987654332222 22222223333457899999
Q ss_pred HHHHHhcccCCCCCCC-----HHHHHcCCcccc
Q 010013 302 DIVKKMLHADPKERLS-----AAEVLNHPWMRV 329 (520)
Q Consensus 302 ~li~~~l~~dp~~Rps-----~~~~l~~~~~~~ 329 (520)
+||.+||..||++||| ++|+++||||+.
T Consensus 238 ~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~ 270 (364)
T d1omwa3 238 SLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 270 (364)
T ss_dssp HHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTT
T ss_pred HHHHHHcccCHHHhCCCcccCHHHHHcCccccC
Confidence 9999999999999999 799999999975
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-54 Score=417.88 Aligned_cols=256 Identities=25% Similarity=0.383 Sum_probs=213.3
Q ss_pred cceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCc--ccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEec
Q 010013 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINR--DDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDL 149 (520)
Q Consensus 72 ~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~--~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~ 149 (520)
++.||+|+||+||+|.++.+|+.||||++........ ...+.+.+|+.+|++++ |||||++++++.+++++|+||||
T Consensus 3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~~~~~~~~~~~~~ivmE~ 81 (299)
T d1ua2a_ 3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS-HPNIIGLLDAFGHKSNISLVFDF 81 (299)
T ss_dssp EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCC-CTTBCCEEEEECCTTCCEEEEEC
T ss_pred ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCC-CCCEeEEEeeeccCCceeehhhh
Confidence 5789999999999999999999999999865433211 12356889999999998 99999999999999999999999
Q ss_pred cCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC-ccc
Q 010013 150 CAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD-VFK 228 (520)
Q Consensus 150 ~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-~~~ 228 (520)
+.|+++.........+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|+...... ...
T Consensus 82 ~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli---~~~~~~KL~DFG~a~~~~~~~~~~~ 158 (299)
T d1ua2a_ 82 METDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAYT 158 (299)
T ss_dssp CSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECCCGGGSTTTSCCCCCC
T ss_pred hcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEe---cCCCccccccCccccccCCCccccc
Confidence 9998887766667789999999999999999999999999999999999999 456789999999998764432 334
Q ss_pred ccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCC---------------
Q 010013 229 DLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD--------------- 291 (520)
Q Consensus 229 ~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~--------------- 291 (520)
..+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+....+.+..+.+........
T Consensus 159 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (299)
T d1ua2a_ 159 HQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFK 238 (299)
T ss_dssp CSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCC
T ss_pred ceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhc
Confidence 5689999999998753 47999999999999999999999999999888777765421111100
Q ss_pred ---------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 292 ---------PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 292 ---------~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
.++.+++++.+||.+||..||++|||+.|+|+||||+...
T Consensus 239 ~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~p 287 (299)
T d1ua2a_ 239 SFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRP 287 (299)
T ss_dssp CCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSS
T ss_pred cCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhCCCC
Confidence 0235688999999999999999999999999999998544
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-54 Score=411.50 Aligned_cols=253 Identities=30% Similarity=0.552 Sum_probs=216.1
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCccc---HHHHHHHHHHHHhcc-CCCCeeEEEEEEEeC
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDD---VEDVRREVQIMHHLT-GHRNIVELKGAYEDR 140 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~---~~~~~~e~~~l~~l~-~hp~iv~l~~~~~~~ 140 (520)
+.++|.+++.||+|+||+||+|+++.+|+.||||++.+........ ..++.+|+.+|+++. .|||||++++++.+.
T Consensus 2 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~ 81 (273)
T d1xwsa_ 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 81 (273)
T ss_dssp CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred CCCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeC
Confidence 3578999999999999999999999999999999997654433221 234678999999996 489999999999999
Q ss_pred CeEEEEEeccCC-CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccc
Q 010013 141 HSVNLIMDLCAG-GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (520)
Q Consensus 141 ~~~~lv~e~~~g-~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~ 219 (520)
+..++||||+.+ +++.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++. +++.+||+|||+|.
T Consensus 82 ~~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~--~~~~vkl~DFG~a~ 159 (273)
T d1xwsa_ 82 DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRGELKLIDFGSGA 159 (273)
T ss_dssp SEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEET--TTTEEEECCCTTCE
T ss_pred CeEEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEec--CCCeEEECccccce
Confidence 999999999976 678888888889999999999999999999999999999999999999963 34679999999998
Q ss_pred ccCCCCcccccccCCCccCchhhccc--CCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 010013 220 FFKPGDVFKDLVGSAYYVAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (520)
Q Consensus 220 ~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (520)
.... .......||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.. .+.++...++ +.+|
T Consensus 160 ~~~~-~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~------~i~~~~~~~~----~~~s 228 (273)
T d1xwsa_ 160 LLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFR----QRVS 228 (273)
T ss_dssp ECCS-SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHCCCCCS----SCCC
T ss_pred eccc-ccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch------HHhhcccCCC----CCCC
Confidence 7543 334567899999999998643 4678999999999999999999997532 3444444433 4689
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 298 ~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
+++++||.+||..||++|||++|+|+||||+..
T Consensus 229 ~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~ 261 (273)
T d1xwsa_ 229 SECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 261 (273)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSC
T ss_pred HHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCC
Confidence 999999999999999999999999999999743
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=1.7e-54 Score=411.68 Aligned_cols=261 Identities=25% Similarity=0.396 Sum_probs=222.3
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC--
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH-- 141 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~-- 141 (520)
.+.++|.+.+.||+|+||+||+|.++.+|+.||||++.+....+....+.+.+|+.++++++ ||||+++++++...+
T Consensus 4 ~l~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~-hpniv~~~~~~~~~~~~ 82 (277)
T d1o6ya_ 4 HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN-HPAIVAVYDTGEAETPA 82 (277)
T ss_dssp EETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEEEECSS
T ss_pred CccceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcC-CCCCCcccceeeeccCC
Confidence 45688999999999999999999999999999999998766555666778999999999998 999999999987643
Q ss_pred --eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccc
Q 010013 142 --SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 219 (520)
Q Consensus 142 --~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~ 219 (520)
.+|+|||||+|++|.+++...+++++..+..++.||+.||.|||++||+||||||+|||++ .++.++|+|||.+.
T Consensus 83 ~~~~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~---~~~~~~l~d~~~~~ 159 (277)
T d1o6ya_ 83 GPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS---ATNAVKVMDFGIAR 159 (277)
T ss_dssp SEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE---TTSCEEECCCTTCE
T ss_pred CceEEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccC---ccccceeehhhhhh
Confidence 4899999999999999999999999999999999999999999999999999999999995 46679999999987
Q ss_pred ccCCCC----cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCC
Q 010013 220 FFKPGD----VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP 294 (520)
Q Consensus 220 ~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (520)
...... .....+||+.|+|||++.+ .++.++|||||||++|+|+||.+||.+.+..+....+.......+...++
T Consensus 160 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (277)
T d1o6ya_ 160 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHE 239 (277)
T ss_dssp ECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSS
T ss_pred hhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCchhcc
Confidence 653322 2345679999999999875 48999999999999999999999999999888888887777666655667
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccc
Q 010013 295 NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (520)
Q Consensus 295 ~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~ 328 (520)
.+|+.+.++|.+||.+||++||+..+.|.|+|.+
T Consensus 240 ~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r 273 (277)
T d1o6ya_ 240 GLSADLDAVVLKALAKNPENRYQTAAEMRADLVR 273 (277)
T ss_dssp SCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHH
Confidence 8999999999999999999999655555667664
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-53 Score=408.93 Aligned_cols=261 Identities=26% Similarity=0.402 Sum_probs=214.6
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+++.||+|+||+||+|.++.+|+.||||++.... ......+.+.+|+++|+++. |||||++++++.+++.+|+|
T Consensus 2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~~Ei~il~~l~-Hp~Iv~~~~~~~~~~~~~iv 79 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELN-HPNIVKLLDVIHTENKLYLV 79 (298)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC--------CCHHHHHHHHHHTTCC-CTTBCCEEEEEEETTEEEEE
T ss_pred CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhh-cChHHHHHHHHHHHHHHhCC-CCcEEEeccccccccceeEE
Confidence 57999999999999999999999999999999996543 23334578899999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC-
Q 010013 147 MDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG- 224 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~- 224 (520)
|||+.++.+...... .+.+++..+..++.||+.||.|||++|||||||||+|||+ +.++.+||+|||+|+.....
T Consensus 80 ~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~---~~~~~~kl~DFG~a~~~~~~~ 156 (298)
T d1gz8a_ 80 FEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPV 156 (298)
T ss_dssp EECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECSTTHHHHHCCCS
T ss_pred EeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheee---cccCcceeccCCcceeccCCc
Confidence 999976544333333 4569999999999999999999999999999999999999 45678999999999876543
Q ss_pred CcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCC-----------
Q 010013 225 DVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD----------- 291 (520)
Q Consensus 225 ~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~----------- 291 (520)
.......||+.|+|||.+.. .++.++|||||||++|+|++|+.||.+.+..+....+..........
T Consensus 157 ~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 236 (298)
T d1gz8a_ 157 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236 (298)
T ss_dssp BCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred ccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhcccccccccc
Confidence 34455689999999998653 36889999999999999999999999988777666654321111110
Q ss_pred --------------CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 292 --------------PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 292 --------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
..+.+++++.+||.+||..||++|||+.|+|+||||+...+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~~ 291 (298)
T d1gz8a_ 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291 (298)
T ss_dssp CTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred ccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccCCC
Confidence 02356889999999999999999999999999999975443
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-53 Score=400.89 Aligned_cols=250 Identities=24% Similarity=0.440 Sum_probs=205.4
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.++|.+++.||+|+||+||+|+++ ..||||++..... .....+.+.+|+.+|++++ |||||++++++. .+.+++
T Consensus 7 ~~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~-~~~~~~~~~~E~~~l~~l~-HpnIv~~~~~~~-~~~~~l 80 (276)
T d1uwha_ 7 DGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAP-TPQQLQAFKNEVGVLRKTR-HVNILLFMGYST-APQLAI 80 (276)
T ss_dssp TTCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSSC-CTTHHHHHHHHHHHHTTCC-CTTBCCEEEEEC-SSSCEE
T ss_pred cccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEcccC-CHHHHHHHHHHHHHHHhCC-CCCEeeeeEEEe-ccEEEE
Confidence 467999999999999999999864 3599999865433 4456788999999999998 999999999875 456899
Q ss_pred EEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCC
Q 010013 146 IMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 224 (520)
|||||+||+|.+++... .++++..+..++.||+.||.|||++|||||||||+|||++ .++.+||+|||+|+.....
T Consensus 81 v~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~---~~~~~Kl~DFGla~~~~~~ 157 (276)
T d1uwha_ 81 VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRW 157 (276)
T ss_dssp EEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE---TTSSEEECCCCCSCC----
T ss_pred EEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEc---CCCCEEEccccceeecccc
Confidence 99999999999999764 5699999999999999999999999999999999999995 5678999999999876432
Q ss_pred C---cccccccCCCccCchhhcc----cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHH-HHHHHcCCCCCC-CCCCCC
Q 010013 225 D---VFKDLVGSAYYVAPEVLRR----NYGAEADIWSAGVILYILLSGVPPFWGETEQSI-FDAILRGHIDFS-SDPWPN 295 (520)
Q Consensus 225 ~---~~~~~~gt~~y~aPE~~~~----~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~-~~~~~~~~~~~~-~~~~~~ 295 (520)
. ......||+.|+|||++.+ .++.++|||||||++|||+||+.||.+...... ...+..+..... ......
T Consensus 158 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 237 (276)
T d1uwha_ 158 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN 237 (276)
T ss_dssp --------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTT
T ss_pred CCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhcccc
Confidence 2 3345689999999999852 378899999999999999999999988665444 344444433221 223457
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 296 ISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 296 ~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
+|+.+.+|+.+||..||++|||+.+++++
T Consensus 238 ~~~~l~~li~~cl~~dp~~RPt~~~il~~ 266 (276)
T d1uwha_ 238 CPKAMKRLMAECLKKKRDERPLFPQILAS 266 (276)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred chHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 89999999999999999999999999875
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-52 Score=404.93 Aligned_cols=262 Identities=24% Similarity=0.357 Sum_probs=214.6
Q ss_pred ccceeecceeeccCCeEEEEEEEcCC-CcEEEEEEecccccCCcccHHHHHHHHHHHHhcc--CCCCeeEEEEEEEe---
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDT-KQQFACKSISSRKLINRDDVEDVRREVQIMHHLT--GHRNIVELKGAYED--- 139 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~--~hp~iv~l~~~~~~--- 139 (520)
.++|.+++.||+|+||+||+|++..+ ++.||||++...... ......+.+|+.+|+.|. .||||+++++++..
T Consensus 6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~ 84 (305)
T d1blxa_ 6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE-EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 84 (305)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCT-TSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhcc-chHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccc
Confidence 47899999999999999999999765 667999998754332 222344667888887773 49999999999853
Q ss_pred --CCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecc
Q 010013 140 --RHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFG 216 (520)
Q Consensus 140 --~~~~~lv~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg 216 (520)
...++++|||+.++.+...... ...+++..++.++.||+.||.|||++||+||||||+|||+ +..+.+||+|||
T Consensus 85 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi---~~~~~~kl~dfg 161 (305)
T d1blxa_ 85 DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADFG 161 (305)
T ss_dssp SSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECSCC
T ss_pred ccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEE---cCCCCeeecchh
Confidence 3578999999988877544433 4569999999999999999999999999999999999999 456789999999
Q ss_pred cccccCCCCcccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCC-------
Q 010013 217 LSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDF------- 288 (520)
Q Consensus 217 ~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~------- 288 (520)
++.............||+.|+|||++. ..++.++||||+||++|+|++|++||.+.+..+.+..+.......
T Consensus 162 ~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 241 (305)
T d1blxa_ 162 LARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR 241 (305)
T ss_dssp SCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCT
T ss_pred hhhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccc
Confidence 998776555666788999999999885 459999999999999999999999999998877777664321000
Q ss_pred ----------------CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 289 ----------------SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 289 ----------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
....+..+++.+.+||.+||+.||++|||+.|+|+||||+...
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i~ 300 (305)
T d1blxa_ 242 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLE 300 (305)
T ss_dssp TCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred cccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcCch
Confidence 0012346789999999999999999999999999999998543
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=7.8e-53 Score=400.87 Aligned_cols=247 Identities=22% Similarity=0.368 Sum_probs=211.4
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.++|.+.+.||+|+||+||+|.++.+++.||||++.... ...+.+.+|+.+|++++ |||||++++++.+++.+++
T Consensus 16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~----~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~i 90 (287)
T d1opja_ 16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYI 90 (287)
T ss_dssp GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC----SCHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSCEE
T ss_pred HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc----chHHHHHHHHHHHHhCC-CCCEecCCccEeeCCeeEE
Confidence 467999999999999999999999999999999986432 34578999999999998 9999999999999999999
Q ss_pred EEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 146 IMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
|||||++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+|+....
T Consensus 91 v~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~---~~~~~Kl~DFG~a~~~~~ 167 (287)
T d1opja_ 91 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTG 167 (287)
T ss_dssp EEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GGGCEEECCCCCTTTCCS
T ss_pred EeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEEC---CCCcEEEccccceeecCC
Confidence 99999999999998764 4689999999999999999999999999999999999994 567899999999987654
Q ss_pred CCc--ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhhCCCC-CCCCCHHHHHHHHHcCCCCCCCCCCCCCCHH
Q 010013 224 GDV--FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPP-FWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (520)
Q Consensus 224 ~~~--~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~g~~p-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (520)
... .....|++.|+|||++. +.++.++|||||||++|+|++|..| |.+.........+..+.. . .....+|+.
T Consensus 168 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~~-~--~~~~~~~~~ 244 (287)
T d1opja_ 168 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-M--ERPEGCPEK 244 (287)
T ss_dssp SSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCC-C--CCCTTCCHH
T ss_pred CCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcCCC-C--CCCccchHH
Confidence 332 22345789999999876 5699999999999999999996655 455556666655555422 2 223578999
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHc
Q 010013 300 AKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 300 ~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
+.+||.+||+.||++|||+.++++
T Consensus 245 l~~li~~cl~~dP~~Rps~~ei~~ 268 (287)
T d1opja_ 245 VYELMRACWQWNPSDRPSFAEIHQ 268 (287)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHcCCCHhHCcCHHHHHH
Confidence 999999999999999999999976
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=1.1e-52 Score=401.39 Aligned_cols=256 Identities=29% Similarity=0.466 Sum_probs=215.0
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+.+.||+|+||+||+|.++ +|+.||||++..... .....+.+.+|+.+|++++ |||||++++++.+++..+++
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~~~i~ 78 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKE-DEGIPSTTIREISILKELK-HSNIVKLYDVIHTKKRLVLV 78 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSG-GGCCCHHHHHHHHGGGGCC-CTTBCCEEEEEECSSCEEEE
T ss_pred CCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhc-ChHHHHHHHHHHHHHHhCC-CCcEEeeeeecccCCceeEE
Confidence 58999999999999999999986 679999999965432 3344678999999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC-
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~- 225 (520)
||++.++.+.......+.+++..+..++.||+.||.|||+.||+||||||+|||+ +.++.+||+|||.+.......
T Consensus 79 ~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll---~~~~~~kl~DfG~a~~~~~~~~ 155 (286)
T d1ob3a_ 79 FEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI---NREGELKIADFGLARAFGIPVR 155 (286)
T ss_dssp EECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECCTTHHHHHCC---
T ss_pred EEeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeE---cCCCCEEecccccceecccCcc
Confidence 9999887777777777889999999999999999999999999999999999999 456789999999998765432
Q ss_pred cccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC--------------
Q 010013 226 VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS-------------- 289 (520)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~-------------- 289 (520)
......|++.|+|||.+.+ .++.++|||||||++|+|++|+.||.+.+..+....+........
T Consensus 156 ~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T d1ob3a_ 156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD 235 (286)
T ss_dssp ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred ccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcc
Confidence 2344578999999998853 478999999999999999999999999887777666543111110
Q ss_pred -----------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccc
Q 010013 290 -----------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328 (520)
Q Consensus 290 -----------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~ 328 (520)
....+.+++.+.+||.+||..||++|||+.|+|+||||+
T Consensus 236 ~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~f~ 285 (286)
T d1ob3a_ 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285 (286)
T ss_dssp TTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGG
T ss_pred cccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccC
Confidence 011245789999999999999999999999999999997
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.5e-52 Score=401.32 Aligned_cols=249 Identities=23% Similarity=0.386 Sum_probs=204.0
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCc---EEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQ---QFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~---~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~ 142 (520)
.+.|++.+.||+|+||+||+|.++.+++ .||||.+.... .....+.+.+|+.+|++++ |||||++++++...+.
T Consensus 25 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~ 101 (299)
T d1jpaa_ 25 ISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQFD-HPNVIHLEGVVTKSTP 101 (299)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSC--CHHHHHHHHHHHHHHTTCC-CTTBCCEEEEECSSSS
T ss_pred hhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECccc--CHHHHHHHHHHHHHHHhCC-CCCCccEEEEEeeCCE
Confidence 4679999999999999999999987654 58888875432 3445677999999999998 9999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 143 VNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
+++|||||+||+|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++..
T Consensus 102 ~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl---~~~~~~Kl~DFGla~~~ 178 (299)
T d1jpaa_ 102 VMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILV---NSNLVCKVSDFGLSRFL 178 (299)
T ss_dssp CEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCC------
T ss_pred EEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEE---CCCCcEEECCcccceEc
Confidence 99999999999999988774 469999999999999999999999999999999999999 45778999999999876
Q ss_pred CCCCcc------cccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCC
Q 010013 222 KPGDVF------KDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPW 293 (520)
Q Consensus 222 ~~~~~~------~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 293 (520)
...... ....||+.|+|||++. +.++.++|||||||++|||+| |..||.+....++...+..+.... ..
T Consensus 179 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~---~~ 255 (299)
T d1jpaa_ 179 EDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLP---PP 255 (299)
T ss_dssp -----------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCC---CC
T ss_pred cCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC---CC
Confidence 543211 1235789999999986 458999999999999999998 899999999988888887764322 23
Q ss_pred CCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 294 PNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 294 ~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
..+++.+.+|+.+||+.||++|||+.|+++
T Consensus 256 ~~~~~~l~~li~~cl~~~P~~RPs~~ei~~ 285 (299)
T d1jpaa_ 256 MDCPSALHQLMLDCWQKDRNHRPKFGQIVN 285 (299)
T ss_dssp TTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred ccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 578999999999999999999999999976
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.8e-53 Score=399.17 Aligned_cols=247 Identities=22% Similarity=0.335 Sum_probs=207.8
Q ss_pred ceeeccCCeEEEEEEEcC--CCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEEEecc
Q 010013 73 RELGRGQFGVTYLVTHKD--TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLC 150 (520)
Q Consensus 73 ~~lg~G~~g~Vy~~~~~~--~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv~e~~ 150 (520)
+.||+|+||+||+|.++. +++.||||++.... .++...+.+.+|+.+|++++ |||||++++++..+ ..++|||||
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~~E~~il~~l~-HpnIv~~~g~~~~~-~~~lvmE~~ 89 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-NDPALKDELLAEANVMQQLD-NPYIVRMIGICEAE-SWMLVMEMA 89 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTCC-CTTBCCEEEEEESS-SEEEEEECC
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhh-CCHHHHHHHHHHHHHHHhCC-CCCCceEEEEeccC-CEEEEEEcC
Confidence 469999999999998753 45789999986543 23445678999999999998 99999999998654 578999999
Q ss_pred CCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCCcc---
Q 010013 151 AGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF--- 227 (520)
Q Consensus 151 ~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~--- 227 (520)
++|+|.+++.+...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++........
T Consensus 90 ~~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~---~~~~~kl~DFGla~~~~~~~~~~~~ 166 (277)
T d1xbba_ 90 ELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLV---TQHYAKISDFGLSKALRADENYYKA 166 (277)
T ss_dssp TTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE---ETTEEEECCCTTCEECCTTCSEEEC
T ss_pred CCCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhccc---ccCcccccchhhhhhcccccccccc
Confidence 9999999999989999999999999999999999999999999999999995 4667999999999876543321
Q ss_pred -cccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Q 010013 228 -KDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304 (520)
Q Consensus 228 -~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 304 (520)
....||+.|+|||++. +.++.++|||||||++|||++ |+.||.+....++...+.++..... ...+|+++.+|+
T Consensus 167 ~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~---p~~~~~~~~~li 243 (277)
T d1xbba_ 167 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGC---PAGCPREMYDLM 243 (277)
T ss_dssp ----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCC---CTTCCHHHHHHH
T ss_pred ccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCCCCCC---CcccCHHHHHHH
Confidence 2346899999999886 458899999999999999998 8999999998888888877643322 257899999999
Q ss_pred HHhcccCCCCCCCHHHHH---cCCccc
Q 010013 305 KKMLHADPKERLSAAEVL---NHPWMR 328 (520)
Q Consensus 305 ~~~l~~dp~~Rps~~~~l---~~~~~~ 328 (520)
.+||+.||++|||+++++ +|+|++
T Consensus 244 ~~cl~~dp~~RPs~~~i~~~L~~~~~~ 270 (277)
T d1xbba_ 244 NLCWTYDVENRPGFAAVELRLRNYYYD 270 (277)
T ss_dssp HHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred HHHcCCCHhHCcCHHHHHHHhhCHHhh
Confidence 999999999999999984 565553
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-52 Score=397.30 Aligned_cols=254 Identities=25% Similarity=0.373 Sum_probs=214.3
Q ss_pred ccceeecc-eeeccCCeEEEEEEEcC--CCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 010013 66 RNTYIFGR-ELGRGQFGVTYLVTHKD--TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (520)
Q Consensus 66 ~~~y~~~~-~lg~G~~g~Vy~~~~~~--~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~ 142 (520)
++.|.+.+ +||+|+||+||+|.++. ++..||||++.... .....+.+.+|+++|++++ |||||++++++.+ +.
T Consensus 7 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~~~~E~~il~~l~-HpnIv~l~g~~~~-~~ 82 (285)
T d1u59a_ 7 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLD-NPYIVRLIGVCQA-EA 82 (285)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEES-SS
T ss_pred ccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhc--CHHHHHHHHHHHHHHHhCC-CCCEeeEeeeecc-Ce
Confidence 35677777 49999999999998764 34579999986432 3455678999999999998 9999999999875 45
Q ss_pred EEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 143 VNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
+|+|||||+||+|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++..
T Consensus 83 ~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~---~~~~~Kl~DFGla~~~ 159 (285)
T d1u59a_ 83 LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLV---NRHYAKISDFGLSKAL 159 (285)
T ss_dssp EEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE---ETTEEEECCCTTCEEC
T ss_pred EEEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeec---cCCceeeccchhhhcc
Confidence 78999999999999987654 5799999999999999999999999999999999999995 4667999999999887
Q ss_pred CCCCc----ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCC
Q 010013 222 KPGDV----FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295 (520)
Q Consensus 222 ~~~~~----~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (520)
..... .....||+.|+|||++. +.++.++|||||||++|||+| |..||.+....++...+..+.... ..+.
T Consensus 160 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~~~~---~p~~ 236 (285)
T d1u59a_ 160 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRME---CPPE 236 (285)
T ss_dssp TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCC---CCTT
T ss_pred cccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC---CCCc
Confidence 54332 22346889999999986 458999999999999999998 999999988888888887765432 2257
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHH---HcCCcccc
Q 010013 296 ISSSAKDIVKKMLHADPKERLSAAEV---LNHPWMRV 329 (520)
Q Consensus 296 ~~~~~~~li~~~l~~dp~~Rps~~~~---l~~~~~~~ 329 (520)
+|+++.+||.+||+.||++|||+.++ |+|+|+..
T Consensus 237 ~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~~ 273 (285)
T d1u59a_ 237 CPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 273 (285)
T ss_dssp CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence 89999999999999999999999888 56777753
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-52 Score=392.73 Aligned_cols=246 Identities=24% Similarity=0.447 Sum_probs=204.1
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+++.||+|+||+||+|.+++ ++.||||++.... ...+.+.+|+.++++++ |||||++++++..++..++|
T Consensus 5 ~~~~~~~~iG~G~fg~Vy~~~~~~-~~~vAvK~i~~~~----~~~~~~~~E~~~l~~l~-HpnIv~~~g~~~~~~~~~lv 78 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFGLVHLGYWLN-KDKVAIKTIREGA----MSEEDFIEEAEVMMKLS-HPKLVQLYGVCLEQAPICLV 78 (263)
T ss_dssp SCEEEEEEEECCSSCCEEEEEETT-TEEEEEEECCSSS----SCHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSCEEE
T ss_pred HHcEEEEEEeeCCCeEEEEEEECC-CCEEEEEEECCCc----CcHHHHHHHHHHHHhcC-CCCcccccceeccCCceEEE
Confidence 569999999999999999999874 5789999986532 23467999999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 147 MDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
|||+++|+|.+++... ..+++..+..++.||+.||.|||+++|+||||||+|||++ .++.+||+|||+++......
T Consensus 79 ~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~---~~~~~Kl~DFGla~~~~~~~ 155 (263)
T d1sm2a_ 79 FEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG---ENQVIKVSDFGMTRFVLDDQ 155 (263)
T ss_dssp EECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEEC---GGGCEEECSCC---------
T ss_pred EEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeec---CCCCeEecccchheeccCCC
Confidence 9999999999988654 5689999999999999999999999999999999999994 56789999999998765433
Q ss_pred c--ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHH
Q 010013 226 V--FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (520)
Q Consensus 226 ~--~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (520)
. .....||+.|+|||++.+ .++.++|||||||++|||+| |.+||......+....+..+.....+ ..+++++.
T Consensus 156 ~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~p---~~~~~~l~ 232 (263)
T d1sm2a_ 156 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKP---RLASTHVY 232 (263)
T ss_dssp ---------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCCCC---TTSCHHHH
T ss_pred ceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcCCCCCc---cccCHHHH
Confidence 2 233578999999999874 59999999999999999999 67778878888888888776443322 46789999
Q ss_pred HHHHHhcccCCCCCCCHHHHHcC
Q 010013 302 DIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 302 ~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
+++.+||+.||++|||++++++|
T Consensus 233 ~li~~cl~~~p~~Rps~~~il~~ 255 (263)
T d1sm2a_ 233 QIMNHCWKERPEDRPAFSRLLRQ 255 (263)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHccCCHhHCcCHHHHHHH
Confidence 99999999999999999999875
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-52 Score=407.00 Aligned_cols=252 Identities=24% Similarity=0.375 Sum_probs=210.1
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCc-----EEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQ-----QFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~-----~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~ 140 (520)
.++|.+++.||+|+||+||+|.++.+++ .||+|.+.... .......+.+|+.++.++.+|||||++++++.+.
T Consensus 36 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~ 113 (325)
T d1rjba_ 36 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA--DSSEREALMSELKMMTQLGSHENIVNLLGACTLS 113 (325)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEecccc--CHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeC
Confidence 4689999999999999999999876543 68999886433 2334567899999999995599999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHhc-----------------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCC
Q 010013 141 HSVNLIMDLCAGGELFDRIIAK-----------------------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPE 197 (520)
Q Consensus 141 ~~~~lv~e~~~g~~L~~~l~~~-----------------------~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~ 197 (520)
+.+++|||||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+
T Consensus 114 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~ 193 (325)
T d1rjba_ 114 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAAR 193 (325)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGG
T ss_pred CeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchh
Confidence 9999999999999999999754 24899999999999999999999999999999999
Q ss_pred cEEeecCCCCCCeeEeecccccccCCCCc---ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCC
Q 010013 198 NFLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGE 272 (520)
Q Consensus 198 NIll~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~ 272 (520)
|||++ .++.+||+|||+|+....... .....||+.|+|||++. +.++.++|||||||++|+|+| |..||.+.
T Consensus 194 Nill~---~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~ 270 (325)
T d1rjba_ 194 NVLVT---HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 270 (325)
T ss_dssp GEEEE---TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred ccccc---cCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCC
Confidence 99995 567899999999987644332 23456899999999886 568999999999999999998 89999887
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 273 TEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
.....+..+......++. ...+|+++.+||.+||+.||++|||++|+++|
T Consensus 271 ~~~~~~~~~~~~~~~~~~--p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~ 320 (325)
T d1rjba_ 271 PVDANFYKLIQNGFKMDQ--PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF 320 (325)
T ss_dssp CCSHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CHHHHHHHHHhcCCCCCC--CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 665555555555443332 35789999999999999999999999999875
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-52 Score=394.21 Aligned_cols=251 Identities=20% Similarity=0.336 Sum_probs=213.3
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
..++|++++.||+|+||.||+|.++ +++.||||++.... ...+.+.+|+.++++++ |||||++++++.+ +..+
T Consensus 11 ~~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~----~~~~~~~~E~~~l~~l~-HpnIv~~~g~~~~-~~~~ 83 (272)
T d1qpca_ 11 PRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS----MSPDAFLAEANLMKQLQ-HQRLVRLYAVVTQ-EPIY 83 (272)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTS----SCHHHHHHHHHHHHHCC-CTTBCCEEEEECS-SSCE
T ss_pred CHHHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCc----CCHHHHHHHHHHHHhCC-CCCEeEEEeeecc-CCeE
Confidence 3578999999999999999999986 46789999986432 33567999999999998 9999999998754 5678
Q ss_pred EEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 145 LIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
+|||||++|+|.+++... .++++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|+...
T Consensus 84 iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll---~~~~~~Kl~DFGla~~~~ 160 (272)
T d1qpca_ 84 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARLIE 160 (272)
T ss_dssp EEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEECCCTTCEECS
T ss_pred EEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheee---ecccceeeccccceEEcc
Confidence 999999999999877543 369999999999999999999999999999999999999 467789999999999875
Q ss_pred CCCc--ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhhC-CCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCH
Q 010013 223 PGDV--FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSG-VPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298 (520)
Q Consensus 223 ~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (520)
.... .....||+.|+|||++. +.++.++|||||||++|||+|| .+||......+....+..+..... ...+++
T Consensus 161 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~~~---p~~~~~ 237 (272)
T d1qpca_ 161 DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR---PDNCPE 237 (272)
T ss_dssp SSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCC---CTTCCH
T ss_pred CCccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCC---cccChH
Confidence 4432 23457899999999986 4589999999999999999995 666777777778888776644332 247899
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHc--CCccc
Q 010013 299 SAKDIVKKMLHADPKERLSAAEVLN--HPWMR 328 (520)
Q Consensus 299 ~~~~li~~~l~~dp~~Rps~~~~l~--~~~~~ 328 (520)
.+.+|+.+||+.||++|||+.++++ |+||.
T Consensus 238 ~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~ft 269 (272)
T d1qpca_ 238 ELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 269 (272)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence 9999999999999999999999988 67775
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.2e-52 Score=388.06 Aligned_cols=246 Identities=24% Similarity=0.412 Sum_probs=215.9
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|.+++.||+|+||+||+|+++ +++.||||++..... ..+.+.+|+.++++++ ||||+++++++.+++.+++|
T Consensus 4 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~----~~~~~~~Ev~~~~~l~-HpnIv~~~g~~~~~~~~~iv 77 (258)
T d1k2pa_ 4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM----SEDEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIFII 77 (258)
T ss_dssp CCCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSSS----CHHHHHHHHHHHHTCC-CTTBCCEEEEECCSSSEEEE
T ss_pred HHCEEeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCcC----CHHHHHHHHHHHHhcC-CCceeeEEEEEeeCCceEEE
Confidence 56899999999999999999985 578899999875432 3467899999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 147 MDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
|||+++|+|.+++.. ...+++..+.+++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++......
T Consensus 78 ~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill---~~~~~~kl~DfG~a~~~~~~~ 154 (258)
T d1k2pa_ 78 TEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV---NDQGVVKVSDFGLSRYVLDDE 154 (258)
T ss_dssp EECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEE---CTTCCEEECCCSSCCBCSSSS
T ss_pred EEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEE---cCCCcEEECcchhheeccCCC
Confidence 999999999988655 4569999999999999999999999999999999999999 457789999999998765433
Q ss_pred c--ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHH
Q 010013 226 V--FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301 (520)
Q Consensus 226 ~--~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (520)
. .....||+.|+|||++. +.++.++|||||||++|||+| |+.||.+.+..++...+..+..... ...+++.+.
T Consensus 155 ~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~---p~~~~~~l~ 231 (258)
T d1k2pa_ 155 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR---PHLASEKVY 231 (258)
T ss_dssp CCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCC---CTTCCHHHH
T ss_pred ceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCCCCCC---cccccHHHH
Confidence 2 23456899999999986 458999999999999999998 8999999999988888887654332 257889999
Q ss_pred HHHHHhcccCCCCCCCHHHHHcC
Q 010013 302 DIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 302 ~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
+||.+||+.||++|||+.++|+|
T Consensus 232 ~li~~cl~~dP~~RPt~~eil~~ 254 (258)
T d1k2pa_ 232 TIMYSCWHEKADERPTFKILLSN 254 (258)
T ss_dssp HHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHccCCHhHCcCHHHHHHH
Confidence 99999999999999999999986
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-51 Score=399.51 Aligned_cols=260 Identities=27% Similarity=0.451 Sum_probs=213.8
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe------
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED------ 139 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~------ 139 (520)
.++|++++.||+|+||+||+|+++.+|+.||||++..... .....+.+.+|+.+|++++ ||||+++++++..
T Consensus 9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l~-h~nii~~~~~~~~~~~~~~ 86 (318)
T d3blha1 9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE-KEGFPITALREIKILQLLK-HENVVNLIEICRTKASPYN 86 (318)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----C-TTSSCHHHHHHHHHHHHCC-CTTBCCEEEEEEC------
T ss_pred cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhc-chHHHHHHHHHHHHHHHhc-CCCccceEeeeeccccccc
Confidence 4789999999999999999999999999999999876543 3345577889999999998 9999999998754
Q ss_pred --CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccc
Q 010013 140 --RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (520)
Q Consensus 140 --~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~ 217 (520)
....++||||+.++.+.........+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+
T Consensus 87 ~~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~---~~~~~kl~dfg~ 163 (318)
T d3blha1 87 RCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGL 163 (318)
T ss_dssp ----CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTSCEEECCCTT
T ss_pred ccCceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeec---CCCcEEeeecce
Confidence 456899999998877766656667899999999999999999999999999999999999994 567899999999
Q ss_pred ccccCCCC-----cccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCC
Q 010013 218 SVFFKPGD-----VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSS 290 (520)
Q Consensus 218 a~~~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~ 290 (520)
+..+.... .....+||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+.........+......+..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 243 (318)
T d3blha1 164 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITP 243 (318)
T ss_dssp CEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred eeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence 98764322 2234579999999998753 5899999999999999999999999998887776666543332222
Q ss_pred CCCCC----------------------------CCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 291 DPWPN----------------------------ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 291 ~~~~~----------------------------~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
..+.. .++.+.+||.+||..||++|||+.|+|+||||+..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~~ 311 (318)
T d3blha1 244 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD 311 (318)
T ss_dssp TTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSSS
T ss_pred hhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhccC
Confidence 21111 26778899999999999999999999999999854
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-51 Score=405.02 Aligned_cols=253 Identities=29% Similarity=0.439 Sum_probs=210.1
Q ss_pred ceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe------CC
Q 010013 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED------RH 141 (520)
Q Consensus 68 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~------~~ 141 (520)
+|...+.||+|+||+||+|+++.+|+.||||++..... ...+|+.+|++++ ||||+++++++.. ..
T Consensus 21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-------~~~~Ei~il~~l~-h~niv~~~~~~~~~~~~~~~~ 92 (350)
T d1q5ka_ 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLD-HCNIVRLRYFFYSSGEKKDEV 92 (350)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-------SCCHHHHHHHHCC-CTTBCCEEEEEEEC--CCSCC
T ss_pred CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch-------HHHHHHHHHHhcC-CCCCCcEEEEEEecCccCCce
Confidence 69999999999999999999999999999999965432 2347999999998 9999999999853 34
Q ss_pred eEEEEEeccCCCchHHH---HHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccc
Q 010013 142 SVNLIMDLCAGGELFDR---IIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218 (520)
Q Consensus 142 ~~~lv~e~~~g~~L~~~---l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a 218 (520)
++++|||||+++.+... ......+++..++.++.||+.||.|||++||+||||||+|||++. +...+||+|||++
T Consensus 93 ~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~--~~~~~kl~DFG~a 170 (350)
T d1q5ka_ 93 YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSA 170 (350)
T ss_dssp EEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECT--TTCCEEECCCTTC
T ss_pred EEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEec--CCCceeEecccch
Confidence 68999999987643332 234567999999999999999999999999999999999999953 2347999999999
Q ss_pred cccCCCCcccccccCCCccCchhhc--ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC------------
Q 010013 219 VFFKPGDVFKDLVGSAYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG------------ 284 (520)
Q Consensus 219 ~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~------------ 284 (520)
.............||+.|+|||.+. ..++.++||||+||++|+|++|..||......+.+..+.+.
T Consensus 171 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~ 250 (350)
T d1q5ka_ 171 KQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 250 (350)
T ss_dssp EECCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHH
T ss_pred hhccCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhh
Confidence 9887666667778999999999864 35899999999999999999999999988877666555321
Q ss_pred -----CCCCC--------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 285 -----HIDFS--------SDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 285 -----~~~~~--------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
...++ ....+.+++++.+||.+||..||++|||+.|+|+||||+..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~ 309 (350)
T d1q5ka_ 251 NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309 (350)
T ss_dssp CC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred ccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccc
Confidence 00111 01124578999999999999999999999999999999754
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-51 Score=403.29 Aligned_cols=259 Identities=27% Similarity=0.444 Sum_probs=212.0
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC--
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH-- 141 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~-- 141 (520)
.+.++|.+++.||+|+||+||+|.++.+|+.||||++.... ......+.+.+|+.+|+++. |||||+++++|...+
T Consensus 15 ~~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~-~~~~~~~~~~~Ei~il~~l~-hpniv~l~~~~~~~~~~ 92 (346)
T d1cm8a_ 15 EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMR-HENVIGLLDVFTPDETL 92 (346)
T ss_dssp CCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT-SSHHHHHHHHHHHHHHHHCC-BTTBCCCSEEECSCSST
T ss_pred ecCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhh-cChHHHHHHHHHHHHHHhcC-CCCeeEEEEEeccCccc
Confidence 47889999999999999999999999999999999997533 34455678899999999998 999999999997654
Q ss_pred ----eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccc
Q 010013 142 ----SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (520)
Q Consensus 142 ----~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~ 217 (520)
.+|+||||| |.+|...+ +.+++++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 93 ~~~~~~~lv~e~~-~~~l~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~---~~~~~~kl~Dfg~ 167 (346)
T d1cm8a_ 93 DDFTDFYLVMPFM-GTDLGKLM-KHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV---NEDCELKILDFGL 167 (346)
T ss_dssp TTCCCCEEEEECC-SEEHHHHH-HHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTT
T ss_pred cccceEEEEEecc-cccHHHHH-HhccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhc---ccccccccccccc
Confidence 579999999 66666654 55689999999999999999999999999999999999999 5677899999999
Q ss_pred ccccCCCCcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC---------
Q 010013 218 SVFFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI--------- 286 (520)
Q Consensus 218 a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~--------- 286 (520)
|+.... ......||+.|+|||++.+ .++.++||||+||++|+|++|++||.+......+..+.....
T Consensus 168 a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (346)
T d1cm8a_ 168 ARQADS--EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQR 245 (346)
T ss_dssp CEECCS--SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHT
T ss_pred eeccCC--ccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhh
Confidence 987643 3456789999999998754 478999999999999999999999998877665544332111
Q ss_pred --------------CCCC----CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCC
Q 010013 287 --------------DFSS----DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDG 331 (520)
Q Consensus 287 --------------~~~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~ 331 (520)
.... ...+.+++.+.+||.+||..||++|||+.|+|+||||+...
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~ 308 (346)
T d1cm8a_ 246 LQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 308 (346)
T ss_dssp CSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred hcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCC
Confidence 1111 12346789999999999999999999999999999998543
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=2.4e-51 Score=400.10 Aligned_cols=255 Identities=26% Similarity=0.517 Sum_probs=212.3
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe--CCe
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED--RHS 142 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~--~~~ 142 (520)
..++|++++.||+|+||+||+|+++.+|+.||||++... ..+.+.+|+.+|+++.+||||+++++++.. ...
T Consensus 33 ~~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~------~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~ 106 (328)
T d3bqca1 33 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRT 106 (328)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCS
T ss_pred CCcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH------HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCc
Confidence 347899999999999999999999999999999998542 346788999999999779999999999974 457
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
+++|||||.+++|... .+.+++..+..++.||+.||.|||++||+||||||+|||++. ++..+||+|||+|....
T Consensus 107 ~~~v~e~~~~~~L~~~---~~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~--~~~~vkl~DFG~a~~~~ 181 (328)
T d3bqca1 107 PALVFEHVNNTDFKQL---YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYH 181 (328)
T ss_dssp EEEEEECCCSCBGGGT---TTSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET--TTTEEEECCGGGCEECC
T ss_pred eeEEEeecCCCcHHHH---hcCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcC--CCCeeeecccccceecc
Confidence 9999999999998765 357999999999999999999999999999999999999963 34469999999999887
Q ss_pred CCCcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHH-HHHHHHH-------------cCCC
Q 010013 223 PGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQ-SIFDAIL-------------RGHI 286 (520)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~-~~~~~~~-------------~~~~ 286 (520)
.........||+.|+|||.+.+ .++.++||||+||++|++++|..||...... .....+. ....
T Consensus 182 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 261 (328)
T d3bqca1 182 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI 261 (328)
T ss_dssp TTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTC
T ss_pred CCCcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhccc
Confidence 6666677789999999998754 4799999999999999999999999765432 1111111 0000
Q ss_pred C--------------------CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 287 D--------------------FSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 287 ~--------------------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
. ........+++++.+||.+||..||++|||++|+|+||||+..
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~v 325 (328)
T d3bqca1 262 ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 325 (328)
T ss_dssp CCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTS
T ss_pred ccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence 0 1111223578999999999999999999999999999999753
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.4e-52 Score=401.47 Aligned_cols=260 Identities=29% Similarity=0.523 Sum_probs=216.9
Q ss_pred cceeecceeeccCCeEEEEEEEc---CCCcEEEEEEecccccC-CcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHK---DTKQQFACKSISSRKLI-NRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~~avK~~~~~~~~-~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~ 142 (520)
++|++++.||+|+||+||+|.+. .+|+.||||++.+.... .....+.+.+|+.+++++++||||+++++++.+...
T Consensus 24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~ 103 (322)
T d1vzoa_ 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 103 (322)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence 67999999999999999999874 46899999998754332 223356788999999999956999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 143 VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
++++|||+.||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.+.
T Consensus 104 ~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~---~~~~vkL~DFG~a~~~~ 180 (322)
T d1vzoa_ 104 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLD---SNGHVVLTDFGLSKEFV 180 (322)
T ss_dssp EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEESCSSEEEECC
T ss_pred eeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeec---CCCCEEEeeccchhhhc
Confidence 999999999999999999999999999999999999999999999999999999999994 56789999999998764
Q ss_pred CCC--cccccccCCCccCchhhcc---cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 010013 223 PGD--VFKDLVGSAYYVAPEVLRR---NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (520)
Q Consensus 223 ~~~--~~~~~~gt~~y~aPE~~~~---~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (520)
... ......|++.|+|||.+.+ .++.++|||||||+||+|++|..||.+.........+.+............++
T Consensus 181 ~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~~s 260 (322)
T d1vzoa_ 181 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMS 260 (322)
T ss_dssp GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTTSC
T ss_pred ccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCCCCCcccCC
Confidence 322 2345679999999998853 36889999999999999999999998765433333333322222222234689
Q ss_pred HHHHHHHHHhcccCCCCCC-----CHHHHHcCCcccc
Q 010013 298 SSAKDIVKKMLHADPKERL-----SAAEVLNHPWMRV 329 (520)
Q Consensus 298 ~~~~~li~~~l~~dp~~Rp-----s~~~~l~~~~~~~ 329 (520)
+++.+||.+||.+||++|| |++|+|+||||+.
T Consensus 261 ~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~ 297 (322)
T d1vzoa_ 261 ALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK 297 (322)
T ss_dssp HHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTT
T ss_pred HHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcC
Confidence 9999999999999999999 5899999999975
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-50 Score=385.70 Aligned_cols=258 Identities=25% Similarity=0.465 Sum_probs=218.3
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLI 146 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~lv 146 (520)
++|++++.||+|+||+||+|+++.+++.||||++.... ......+.+.+|+.+|++++ ||||+++++++.+....++|
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~iv 79 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDD-DDEGVPSSALREICLLKELK-HKNIVRLHDVLHSDKKLTLV 79 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSC-SSTTHHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEEE
T ss_pred CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhh-CChHHHHHHHHHHHHHHhcC-cCCEEeeccccccccceeEE
Confidence 57999999999999999999999999999999996544 23455688999999999998 99999999999999999999
Q ss_pred EeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC-
Q 010013 147 MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD- 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~- 225 (520)
++++.|++|..++...+.+++..+..++.|++.||+|||++||+||||||+|||++ .++.+||+|||.+.......
T Consensus 80 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~---~~~~~kl~DFG~a~~~~~~~~ 156 (292)
T d1unla_ 80 FEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLIN---RNGELKLANFGLARAFGIPVR 156 (292)
T ss_dssp EECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTCEECCSCCS
T ss_pred eeeccccccccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccc---cCCceeeeecchhhcccCCCc
Confidence 99999999998888888999999999999999999999999999999999999994 46679999999998875433
Q ss_pred cccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCC-CCCHHHHHHHHHcCCCCC--------------
Q 010013 226 VFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFW-GETEQSIFDAILRGHIDF-------------- 288 (520)
Q Consensus 226 ~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~-~~~~~~~~~~~~~~~~~~-------------- 288 (520)
......+++.|+|||.+.+ .++.++||||+||++|+|++|..||. +.+..+....+.......
T Consensus 157 ~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (292)
T d1unla_ 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDY 236 (292)
T ss_dssp CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTC
T ss_pred cceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccc
Confidence 3344567889999998764 37899999999999999999998864 445555555443211110
Q ss_pred -----------CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCcccc
Q 010013 289 -----------SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329 (520)
Q Consensus 289 -----------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~ 329 (520)
.....+.+++.+.+||.+||+.||++|||++|+|+||||+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~ 288 (292)
T d1unla_ 237 KPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288 (292)
T ss_dssp CCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSS
T ss_pred cccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChhhcC
Confidence 11122467899999999999999999999999999999974
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6e-51 Score=399.30 Aligned_cols=261 Identities=30% Similarity=0.477 Sum_probs=210.8
Q ss_pred ccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCC--
Q 010013 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRH-- 141 (520)
Q Consensus 64 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~-- 141 (520)
++.++|.+++.||+|+||+||+|.++.+|+.||||++.+.. .....+.+.+|+.+|++++ ||||+++++++....
T Consensus 5 ~i~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~Ei~il~~l~-hp~iv~~~~~~~~~~~~ 81 (345)
T d1pmea_ 5 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFR-HENIIGINDIIRAPTIE 81 (345)
T ss_dssp CCCTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTT--CHHHHHHHHHHHHHHHHCC-CTTBCCCCEEECCSSTT
T ss_pred CcCCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhc--ChHHHHHHHHHHHHHHHcC-CCCCCcEEEEEeecccc
Confidence 45678999999999999999999999999999999996432 3445677899999999998 999999999987643
Q ss_pred ---eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccc
Q 010013 142 ---SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218 (520)
Q Consensus 142 ---~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a 218 (520)
.+++ ++++.||+|.+++.. +++++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++
T Consensus 82 ~~~~~~l-~~~~~~g~L~~~l~~-~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~---~~~~~kl~DfG~a 156 (345)
T d1pmea_ 82 QMKDVYL-VTHLMGADLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLA 156 (345)
T ss_dssp TCCCEEE-EEECCCEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCTTC
T ss_pred ccceEEE-EEeecCCchhhhhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEEC---CCCCEEEcccCce
Confidence 3455 455669999998865 4799999999999999999999999999999999999994 5678999999999
Q ss_pred cccCCCC----cccccccCCCccCchhhc-c-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC------
Q 010013 219 VFFKPGD----VFKDLVGSAYYVAPEVLR-R-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHI------ 286 (520)
Q Consensus 219 ~~~~~~~----~~~~~~gt~~y~aPE~~~-~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~------ 286 (520)
....... .....+||+.|+|||++. + .++.++||||+||++|+|++|+.||.+...............
T Consensus 157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 236 (345)
T d1pmea_ 157 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 236 (345)
T ss_dssp EECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHH
T ss_pred eeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhh
Confidence 8764322 234567999999999874 3 478899999999999999999999988776554443321100
Q ss_pred -----------------CCCC----CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCC
Q 010013 287 -----------------DFSS----DPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGD 332 (520)
Q Consensus 287 -----------------~~~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~ 332 (520)
.... ..++.+++++.+||.+||..||++|||+.|+|+||||+....
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~~~ 303 (345)
T d1pmea_ 237 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 303 (345)
T ss_dssp HHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTTCC
T ss_pred hhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccCCC
Confidence 0000 113567889999999999999999999999999999985544
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-50 Score=382.72 Aligned_cols=248 Identities=21% Similarity=0.361 Sum_probs=203.3
Q ss_pred cceeecceeeccCCeEEEEEEEcCCC----cEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTK----QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~----~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~ 142 (520)
+.|.+.+.||+|+||.||+|.++.++ ..||||++.... .......+.+|+.++++++ |||||++++++.+.+.
T Consensus 7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~il~~l~-H~nIv~~~g~~~~~~~ 83 (283)
T d1mqba_ 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQFS-HHNIIRLEGVISKYKP 83 (283)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTCC-CTTBCCEEEEECSSSS
T ss_pred HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECccc--ChHHHHHHHHHHHHHHhcC-CCCEeeeeEEEecCCc
Confidence 56899999999999999999987654 469999986432 3344567899999999998 9999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 143 VNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
.++|||||.++++.+.+... +.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++..
T Consensus 84 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl---~~~~~~Kl~DFGla~~~ 160 (283)
T d1mqba_ 84 MMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVL 160 (283)
T ss_dssp EEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCCCC----
T ss_pred eEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEE---CCCCeEEEcccchhhcc
Confidence 99999999999999887665 579999999999999999999999999999999999999 45778999999999876
Q ss_pred CCCC----cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhC-CCCCCCCCHHHHHHHHHcCCCCCCCCCCCC
Q 010013 222 KPGD----VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSG-VPPFWGETEQSIFDAILRGHIDFSSDPWPN 295 (520)
Q Consensus 222 ~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (520)
.... ......||+.|+|||++.+ .++.++|||||||++|||++| .+|+......++...+..+.... ....
T Consensus 161 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~ 237 (283)
T d1mqba_ 161 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLP---TPMD 237 (283)
T ss_dssp -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCC---CCTT
T ss_pred cCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccCCCC---Cchh
Confidence 4332 1223468999999998864 589999999999999999995 55666677777777777654322 2246
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 296 ISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 296 ~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
++..+.+||.+||+.||++|||+.++++
T Consensus 238 ~~~~l~~li~~cl~~~p~~RPt~~eil~ 265 (283)
T d1mqba_ 238 CPSAIYQLMMQCWQQERARRPKFADIVS 265 (283)
T ss_dssp CBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred hHHHHHHHHHHHCcCCHhHCcCHHHHHH
Confidence 8899999999999999999999999976
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.4e-50 Score=381.30 Aligned_cols=253 Identities=22% Similarity=0.371 Sum_probs=209.1
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~l 145 (520)
.++|++++.||+|+||.||+|.++.+ +.||||++.... ...+.+.+|+.++++++ |||||++++++.+ +..++
T Consensus 16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~~----~~~~~~~~E~~~l~~l~-h~nIv~~~g~~~~-~~~~l 88 (285)
T d1fmka3 16 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGT----MSPEAFLQEAQVMKKLR-HEKLVQLYAVVSE-EPIYI 88 (285)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTTS----SCHHHHHHHHHHHHHCC-CTTBCCEEEEECS-SSCEE
T ss_pred HHHEEEeeEEeeCCCeEEEEEEECCC-CEEEEEEECccc----CCHHHHHHHHHHHHhcc-cCCEeEEEEEEec-CCeEE
Confidence 46799999999999999999999765 579999986433 23477999999999998 9999999999854 56789
Q ss_pred EEeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 146 IMDLCAGGELFDRIIA--KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 146 v~e~~~g~~L~~~l~~--~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
||||+++|+|...+.. .+.+++..+..++.||+.||+|||++||+||||||+|||++ .++.+||+|||+++....
T Consensus 89 v~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~---~~~~~kl~DfGla~~~~~ 165 (285)
T d1fmka3 89 VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIED 165 (285)
T ss_dssp EECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GGGCEEECCCCTTC----
T ss_pred EEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEEC---CCCcEEEcccchhhhccC
Confidence 9999999999988854 45799999999999999999999999999999999999994 567899999999987644
Q ss_pred CC--cccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhhC-CCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHH
Q 010013 224 GD--VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSG-VPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299 (520)
Q Consensus 224 ~~--~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (520)
.. ......||+.|+|||++. +.++.++|||||||++|+|++| .+|+.+....+....+..+.... ..+.++++
T Consensus 166 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~ 242 (285)
T d1fmka3 166 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP---CPPECPES 242 (285)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCC---CCTTSCHH
T ss_pred CCceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCC---CCcccCHH
Confidence 33 223457899999999886 5689999999999999999995 55666777777887777654322 23578999
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHc--CCccccCC
Q 010013 300 AKDIVKKMLHADPKERLSAAEVLN--HPWMRVDG 331 (520)
Q Consensus 300 ~~~li~~~l~~dp~~Rps~~~~l~--~~~~~~~~ 331 (520)
+.++|.+||+.||++|||+.++++ ++||....
T Consensus 243 l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~~ 276 (285)
T d1fmka3 243 LHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 276 (285)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred HHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCCC
Confidence 999999999999999999999988 88887543
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-50 Score=384.03 Aligned_cols=249 Identities=27% Similarity=0.372 Sum_probs=202.3
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCC---cEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTK---QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~---~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~ 142 (520)
+++|.+++.||+|+||.||+|.+..++ ..||||.+... ......+.+.+|+.++++++ |||||++++++. .+.
T Consensus 6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~--~~~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~-~~~ 81 (273)
T d1mp8a_ 6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC--TSDSVREKFLQEALTMRQFD-HPHIVKLIGVIT-ENP 81 (273)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT--TSHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEC-SSS
T ss_pred HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccc--cCHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEe-cCe
Confidence 468999999999999999999987543 46888887532 23445677999999999998 999999999985 567
Q ss_pred EEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 143 VNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
+++||||+++|+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||+|+..
T Consensus 82 ~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~---~~~~~Kl~DfG~a~~~ 158 (273)
T d1mp8a_ 82 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYM 158 (273)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE---ETTEEEECC-------
T ss_pred EEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeec---CCCcEEEccchhheec
Confidence 8999999999999998765 45699999999999999999999999999999999999995 4567999999999876
Q ss_pred CCCC--cccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 010013 222 KPGD--VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297 (520)
Q Consensus 222 ~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (520)
.... ......||+.|+|||++. +.++.++|||||||++|+|++ |.+||.+....++...+..+.... .++.+|
T Consensus 159 ~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~~~---~~~~~~ 235 (273)
T d1mp8a_ 159 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP---MPPNCP 235 (273)
T ss_dssp ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCC---CCTTCC
T ss_pred cCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC---CCCCCC
Confidence 4332 223456899999999986 468999999999999999998 899999999888888887765432 235789
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 298 SSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 298 ~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
+.+.+||.+||..||++|||+.|+++|
T Consensus 236 ~~~~~li~~cl~~dp~~Rps~~ei~~~ 262 (273)
T d1mp8a_ 236 PTLYSLMTKCWAYDPSRRPRFTELKAQ 262 (273)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 999999999999999999999999864
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-50 Score=389.61 Aligned_cols=250 Identities=26% Similarity=0.355 Sum_probs=209.8
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcE--EEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQ--FACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~--~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
++|.+++.||+|+||+||+|.++.+|.. ||||.+... ......+.+.+|+.+|+++.+|||||++++++.+.+.++
T Consensus 10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~ 87 (309)
T d1fvra_ 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 87 (309)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcc--cChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeE
Confidence 5799999999999999999999988765 566766432 233445679999999999955999999999999999999
Q ss_pred EEEeccCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCC
Q 010013 145 LIMDLCAGGELFDRIIAK----------------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDS 208 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~----------------~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~ 208 (520)
+||||++||+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++ .++
T Consensus 88 iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~---~~~ 164 (309)
T d1fvra_ 88 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---ENY 164 (309)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---GGG
T ss_pred EEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEc---CCC
Confidence 999999999999998654 5699999999999999999999999999999999999994 567
Q ss_pred CeeEeecccccccCCCCcccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhhC-CCCCCCCCHHHHHHHHHcCCC
Q 010013 209 PLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSG-VPPFWGETEQSIFDAILRGHI 286 (520)
Q Consensus 209 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~g-~~pf~~~~~~~~~~~~~~~~~ 286 (520)
.+||+|||+++............||+.|+|||.+. +.++.++|||||||++|+|++| .+||.+.+..++...+..+..
T Consensus 165 ~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~~ 244 (309)
T d1fvra_ 165 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 244 (309)
T ss_dssp CEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCC
T ss_pred ceEEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhcCC
Confidence 89999999998765444444567899999999986 4589999999999999999996 567888888888888776543
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 287 DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 287 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
. ..+..+++++.+||.+||+.||++|||+.+++++
T Consensus 245 ~---~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~ 279 (309)
T d1fvra_ 245 L---EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 279 (309)
T ss_dssp C---CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred C---CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 2 2235789999999999999999999999999975
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.2e-50 Score=387.63 Aligned_cols=248 Identities=23% Similarity=0.318 Sum_probs=205.6
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCc----EEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCe
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQ----QFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHS 142 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~----~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~ 142 (520)
.+|++++.||+|+||+||+|.+..+|+ .||+|.+... ......+.+.+|+.++++++ |||||++++++.++ .
T Consensus 9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~-~ 84 (317)
T d1xkka_ 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASVD-NPHVCRLLGICLTS-T 84 (317)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC------CTHHHHHHHHHHHHHCC-CTTBCCEEEEEESS-S
T ss_pred HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccc--cCHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEecC-C
Confidence 469999999999999999999988776 4777777532 23345678999999999998 99999999999865 5
Q ss_pred EEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccccccc
Q 010013 143 VNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221 (520)
Q Consensus 143 ~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 221 (520)
.++++|++.+++|.+.+... ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+|+..
T Consensus 85 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~---~~~~~kl~DFGla~~~ 161 (317)
T d1xkka_ 85 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK---TPQHVKITDFGLAKLL 161 (317)
T ss_dssp EEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE---ETTEEEECCCSHHHHT
T ss_pred eeEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeC---CCCCeEeeccccceec
Confidence 67888999999999887764 5799999999999999999999999999999999999995 4667999999999986
Q ss_pred CCCCc---ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCC
Q 010013 222 KPGDV---FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (520)
Q Consensus 222 ~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (520)
..... .....||+.|+|||++. +.++.++|||||||++|||+| |.+||.+....++...+..+..... .+.+
T Consensus 162 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~---p~~~ 238 (317)
T d1xkka_ 162 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---PPIC 238 (317)
T ss_dssp TTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTCCCCC---CTTB
T ss_pred ccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCC---Cccc
Confidence 54332 23346899999999875 568999999999999999998 8999998888777777776643322 2478
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 297 SSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 297 ~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
++.+.+|+.+||+.||++|||+.|+++|
T Consensus 239 ~~~~~~li~~cl~~dP~~RPs~~eil~~ 266 (317)
T d1xkka_ 239 TIDVYMIMVKCWMIDADSRPKFRELIIE 266 (317)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CHHHHHHHHHhCCCChhhCcCHHHHHHH
Confidence 9999999999999999999999999986
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-50 Score=395.89 Aligned_cols=264 Identities=27% Similarity=0.402 Sum_probs=215.3
Q ss_pred cccccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC--
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR-- 140 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~-- 140 (520)
.++.++|++++.||+|+||+||+|+++.+|+.||||++.+.. ......+.+.+|+.+|++++ |||||++++++...
T Consensus 14 ~~~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~~Ei~il~~l~-h~~iv~~~~~~~~~~~ 91 (348)
T d2gfsa1 14 WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-QSIIHAKRTYRELRLLKHMK-HENVIGLLDVFTPARS 91 (348)
T ss_dssp EEEETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTT-SSHHHHHHHHHHHHHHHHCC-CTTBCCCSEEECSCSS
T ss_pred ccCCCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchh-cChHHHHHHHHHHHHHHhcC-CCCeeeEEEEEeeccc
Confidence 345688999999999999999999999999999999997543 34445677899999999998 99999999998633
Q ss_pred ---CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeeccc
Q 010013 141 ---HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217 (520)
Q Consensus 141 ---~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~ 217 (520)
...+++|+++.||+|.+++. .+++++..+..++.||+.||.|||++||+||||||+|||+ +.++.+|++|||+
T Consensus 92 ~~~~~~~~i~~~~~gg~L~~~~~-~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi---~~~~~~kl~dfg~ 167 (348)
T d2gfsa1 92 LEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGL 167 (348)
T ss_dssp TTTCCCCEEEEECCSEEHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECCC--
T ss_pred cccCceEEEEEeecCCchhhhcc-cccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccc---cccccccccccch
Confidence 33456677788999998775 4579999999999999999999999999999999999999 4567899999999
Q ss_pred ccccCCCCcccccccCCCccCchhhcc--cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC------
Q 010013 218 SVFFKPGDVFKDLVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS------ 289 (520)
Q Consensus 218 a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~------ 289 (520)
+.... .......|++.|+|||.+.+ .++.++|||||||++|+|++|..||.+.+.......+........
T Consensus 168 a~~~~--~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~ 245 (348)
T d2gfsa1 168 ARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 245 (348)
T ss_dssp --CCT--GGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTT
T ss_pred hcccC--cccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhh
Confidence 97653 33455679999999998654 368899999999999999999999999887766666543221111
Q ss_pred -----------------CC----CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccCCCCC
Q 010013 290 -----------------SD----PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDAS 334 (520)
Q Consensus 290 -----------------~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~~~~ 334 (520)
.. .+..+++.+.+||.+||..||++|||+.|+|+||||+...+..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~~~~ 311 (348)
T d2gfsa1 246 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 311 (348)
T ss_dssp CCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCTT
T ss_pred ccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCCCCc
Confidence 00 1246789999999999999999999999999999998654433
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-50 Score=380.28 Aligned_cols=250 Identities=24% Similarity=0.388 Sum_probs=203.0
Q ss_pred cceeecceeeccCCeEEEEEEEcCC-C--cEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDT-K--QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSV 143 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~-~--~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~ 143 (520)
++|++.+.||+|+||.||+|.+..+ + ..||||++.+.........+.+.+|+.+|++++ |||||++++++.+ +..
T Consensus 8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~~~g~~~~-~~~ 85 (273)
T d1u46a_ 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-HRNLIRLYGVVLT-PPM 85 (273)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCC-CTTBCCEEEEECS-SSC
T ss_pred HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCC-CCCEEEEEEEEee-cch
Confidence 5699999999999999999987533 3 368999987665555556788999999999998 9999999999976 467
Q ss_pred EEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 144 NLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 144 ~lv~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
++|||||++|++.+.+.. .+.+++..+..++.||+.||.|||++||+||||||+||+++. ++.+||+|||+++...
T Consensus 86 ~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~---~~~vkl~DfGl~~~~~ 162 (273)
T d1u46a_ 86 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLAT---RDLVKIGDFGLMRALP 162 (273)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEE---TTEEEECCCTTCEECC
T ss_pred heeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhcccc---ccceeeccchhhhhcc
Confidence 899999999999987765 456999999999999999999999999999999999999964 5679999999999875
Q ss_pred CCCc----ccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCC
Q 010013 223 PGDV----FKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296 (520)
Q Consensus 223 ~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (520)
.... .....|+..|+|||++.+ .++.++|||||||++|||+| |..||.+.+..+....+.+....++. .+.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~~--~~~~ 240 (273)
T d1u46a_ 163 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR--PEDC 240 (273)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCC--CTTC
T ss_pred cCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCCCCC--cccc
Confidence 4332 123457889999999874 58889999999999999998 89999999999998888776554432 3578
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 297 SSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 297 ~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
|+.+.+||.+||+.||++|||+.++++
T Consensus 241 ~~~l~~li~~cl~~dp~~RPt~~ei~~ 267 (273)
T d1u46a_ 241 PQDIYNVMVQCWAHKPEDRPTFVALRD 267 (273)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 999999999999999999999999864
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.4e-50 Score=394.06 Aligned_cols=258 Identities=28% Similarity=0.434 Sum_probs=202.2
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe-----
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED----- 139 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~----- 139 (520)
+.++|++++.||+|+||+||+|+++.+|+.||||++.... .+....+.+.+|+.++++++ |||||++++++..
T Consensus 15 i~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~-~~~~~~~~~~~Ei~il~~l~-hpnIv~~~~~f~~~~~~~ 92 (355)
T d2b1pa1 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN-HKNIISLLNVFTPQKTLE 92 (355)
T ss_dssp EETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTT-SSHHHHHHHHHHHHHHHHCC-CTTBCCCSEEECSCCSTT
T ss_pred ecCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhh-cCHHHHHHHHHHHHHHHhcC-CCCeeEEEEEEecccccc
Confidence 4578999999999999999999999999999999997543 34455677899999999998 9999999999853
Q ss_pred -CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccc
Q 010013 140 -RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218 (520)
Q Consensus 140 -~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a 218 (520)
..++|+|||||.++ +.+.+ ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+|++|||++
T Consensus 93 ~~~~~~iv~Ey~~~~-l~~~~--~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~---~~~~~kl~df~~~ 166 (355)
T d2b1pa1 93 EFQDVYLVMELMDAN-LCQVI--QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---SDCTLKILDFGLA 166 (355)
T ss_dssp TCCEEEEEEECCSEE-HHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTCCEEECCCCC-
T ss_pred cCceeEEEEeccchH-HHHhh--hcCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccc---cccceeeechhhh
Confidence 46899999999765 44444 35699999999999999999999999999999999999994 5677999999999
Q ss_pred cccCCCCcccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCC------------
Q 010013 219 VFFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH------------ 285 (520)
Q Consensus 219 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~------------ 285 (520)
+............||+.|+|||++.+ .++.++||||+||++|+|++|++||.+.+.......+....
T Consensus 167 ~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 246 (355)
T d2b1pa1 167 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 246 (355)
T ss_dssp --------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSC
T ss_pred hccccccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhh
Confidence 88776666667789999999999864 58999999999999999999999999888766555443211
Q ss_pred ----------CCCCCCCC----------------CCCCHHHHHHHHHhcccCCCCCCCHHHHHcCCccccC
Q 010013 286 ----------IDFSSDPW----------------PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330 (520)
Q Consensus 286 ----------~~~~~~~~----------------~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~~~~~~~ 330 (520)
.......+ ...++++.+||.+||..||++|||++|+|+||||+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~ 317 (355)
T d2b1pa1 247 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW 317 (355)
T ss_dssp HHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGG
T ss_pred hhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence 11110000 1135678999999999999999999999999999853
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.8e-49 Score=381.26 Aligned_cols=252 Identities=24% Similarity=0.346 Sum_probs=214.9
Q ss_pred cccccceeecceeeccCCeEEEEEEEcC-----CCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 010013 63 EDVRNTYIFGRELGRGQFGVTYLVTHKD-----TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAY 137 (520)
Q Consensus 63 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~ 137 (520)
+-.+++|.+++.||+|+||+||+|+++. +++.||||++.... .....+.+.+|+.+|++++ ||||+++++++
T Consensus 9 e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~E~~il~~l~-h~niv~~~~~~ 85 (301)
T d1lufa_ 9 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFD-NPNIVKLLGVC 85 (301)
T ss_dssp BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHHTCC-CTTBCCEEEEE
T ss_pred cCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhc--ChHHHHHHHHHHHHHHhcC-CCCcccceeee
Confidence 3346789999999999999999999763 46789999986432 3344677999999999998 99999999999
Q ss_pred EeCCeEEEEEeccCCCchHHHHHhcC------------------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeec
Q 010013 138 EDRHSVNLIMDLCAGGELFDRIIAKG------------------------HYSERAAANLCRQMVTVVHYCHSMGVMHRD 193 (520)
Q Consensus 138 ~~~~~~~lv~e~~~g~~L~~~l~~~~------------------------~l~~~~~~~i~~qi~~~l~~LH~~~ivH~D 193 (520)
...+..++||||+++|+|.+++.... .+++..+..++.||+.||+|||++||||||
T Consensus 86 ~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrD 165 (301)
T d1lufa_ 86 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRD 165 (301)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred ccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeE
Confidence 99999999999999999999886532 488999999999999999999999999999
Q ss_pred CCCCcEEeecCCCCCCeeEeecccccccCCCC---cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCC-CC
Q 010013 194 LKPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGV-PP 268 (520)
Q Consensus 194 lkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~-~p 268 (520)
|||+|||++ .++.+||+|||+|+...... ......|++.|+|||.+.+ .++.++|||||||++|||++|. +|
T Consensus 166 lKp~NILld---~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p 242 (301)
T d1lufa_ 166 LATRNCLVG---ENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP 242 (301)
T ss_dssp CSGGGEEEC---GGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred EcccceEEC---CCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCC
Confidence 999999995 56789999999998654332 2234578899999998875 5999999999999999999985 78
Q ss_pred CCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 269 FWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
|.+....+....+..+.... ....+++++.+||.+||+.+|++|||+.|+++
T Consensus 243 ~~~~~~~e~~~~v~~~~~~~---~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~ 294 (301)
T d1lufa_ 243 YYGMAHEEVIYYVRDGNILA---CPENCPLELYNLMRLCWSKLPADRPSFCSIHR 294 (301)
T ss_dssp TTTSCHHHHHHHHHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCCHHHHHHHHHcCCCCC---CCccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 99999999888888776432 22578999999999999999999999999965
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-49 Score=382.17 Aligned_cols=251 Identities=24% Similarity=0.361 Sum_probs=198.8
Q ss_pred ccceeecceeeccCCeEEEEEEEcC-----CCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe-
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKD-----TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED- 139 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~- 139 (520)
.++|.+++.||+|+||.||+|.+.. +++.||||++.... .....+.+.+|..++.++.+|+||+.+++++..
T Consensus 12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~ 89 (299)
T d1ywna1 12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACTKP 89 (299)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC------CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred HHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEcccc--CcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccC
Confidence 4689999999999999999999764 34689999986432 234456788899999998779999999998765
Q ss_pred CCeEEEEEeccCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeec
Q 010013 140 RHSVNLIMDLCAGGELFDRIIAK----------------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSS 203 (520)
Q Consensus 140 ~~~~~lv~e~~~g~~L~~~l~~~----------------~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~ 203 (520)
...+++|||||++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 90 ~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~- 168 (299)
T d1ywna1 90 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS- 168 (299)
T ss_dssp TSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC-
T ss_pred CCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeEC-
Confidence 45689999999999999998653 2488999999999999999999999999999999999994
Q ss_pred CCCCCCeeEeecccccccCCCC---cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhC-CCCCCCCCH-HHH
Q 010013 204 SAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSG-VPPFWGETE-QSI 277 (520)
Q Consensus 204 ~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g-~~pf~~~~~-~~~ 277 (520)
.++.+||+|||+|+...... ......||+.|+|||++.+ .++.++|||||||++|+|++| .+||.+... ...
T Consensus 169 --~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~ 246 (299)
T d1ywna1 169 --EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 246 (299)
T ss_dssp --GGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHH
T ss_pred --CCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 56789999999998764332 2234579999999998864 589999999999999999986 567877554 344
Q ss_pred HHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 278 FDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
...+..+... . ....+++++.+++.+||+.||++|||+.|+++|
T Consensus 247 ~~~~~~~~~~-~--~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~ 290 (299)
T d1ywna1 247 CRRLKEGTRM-R--APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 290 (299)
T ss_dssp HHHHHHTCCC-C--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHhcCCCC-C--CCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 4444444322 1 224689999999999999999999999999986
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-49 Score=373.42 Aligned_cols=242 Identities=22% Similarity=0.369 Sum_probs=200.8
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe-CCeEE
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED-RHSVN 144 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~-~~~~~ 144 (520)
.++|++++.||+|+||.||+|.++ |..||||+++.. ...+.+.+|+.++++++ ||||+++++++.+ .+.++
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~i~~~-----~~~~~~~~E~~~l~~l~-HpnIv~~~g~~~~~~~~~~ 77 (262)
T d1byga_ 6 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-----ATAQAFLAEASVMTQLR-HSNLVQLLGVIVEEKGGLY 77 (262)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCC-----C--HHHHHTHHHHTTCC-CTTBCCEEEEECCC--CCE
T ss_pred HHHeEEeEEEecCCCeEEEEEEEC--CeEEEEEEECcH-----HHHHHHHHHHHHHHhCC-CCCEeeEEEEEEecCCcEE
Confidence 357999999999999999999985 678999998643 23477899999999998 9999999998854 56689
Q ss_pred EEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccC
Q 010013 145 LIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 222 (520)
+||||+++|+|.+++...+ .+++..+..++.||+.||.|||+++|+||||||+|||+ +.++.+||+|||+++...
T Consensus 78 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~---~~~~~~kl~dfg~s~~~~ 154 (262)
T d1byga_ 78 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEAS 154 (262)
T ss_dssp EEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTSCEEECCCCC-----
T ss_pred EEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhhee---cCCCCEeecccccceecC
Confidence 9999999999999986543 58999999999999999999999999999999999999 457789999999998754
Q ss_pred CCCcccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCCCCHHH
Q 010013 223 PGDVFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300 (520)
Q Consensus 223 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (520)
.. .....+++.|+|||++. +.++.++|||||||++|||+| |.+||......++...+..+.... ..+.+++.+
T Consensus 155 ~~--~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~ 229 (262)
T d1byga_ 155 ST--QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMD---APDGCPPAV 229 (262)
T ss_dssp ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCC---CCTTCCHHH
T ss_pred CC--CccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCC---CCccCCHHH
Confidence 33 23456889999999885 569999999999999999998 799999888888888887654332 224678999
Q ss_pred HHHHHHhcccCCCCCCCHHHHHc
Q 010013 301 KDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 301 ~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.+||.+||..||++|||+.++++
T Consensus 230 ~~li~~cl~~dP~~Rps~~~l~~ 252 (262)
T d1byga_ 230 YEVMKNCWHLDAAMRPSFLQLRE 252 (262)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHcccCHhHCcCHHHHHH
Confidence 99999999999999999999976
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.7e-49 Score=377.11 Aligned_cols=251 Identities=26% Similarity=0.434 Sum_probs=210.3
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCC-------cEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTK-------QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAY 137 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~-------~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~ 137 (520)
..++|.+++.||+|+||.||+|++..++ ..||||++.+.. .......+.+|...+.++..|||||++++++
T Consensus 11 ~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~ 88 (299)
T d1fgka_ 11 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGAC 88 (299)
T ss_dssp CGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECccc--ChHHHHHHHHHHHHHHHhcCCCeEEeccccc
Confidence 3578999999999999999999986554 479999986533 3344577889999999996699999999999
Q ss_pred EeCCeEEEEEeccCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEe
Q 010013 138 EDRHSVNLIMDLCAGGELFDRIIAK----------------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLF 201 (520)
Q Consensus 138 ~~~~~~~lv~e~~~g~~L~~~l~~~----------------~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll 201 (520)
.+++..++|||||++|+|.+++... ..+++..+..++.||+.||.|||++|||||||||+|||+
T Consensus 89 ~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl 168 (299)
T d1fgka_ 89 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV 168 (299)
T ss_dssp CSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred ccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceee
Confidence 9999999999999999999999654 358999999999999999999999999999999999999
Q ss_pred ecCCCCCCeeEeecccccccCCCC---cccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHH
Q 010013 202 SSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQS 276 (520)
Q Consensus 202 ~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~ 276 (520)
+.++.+||+|||+++...... ......|++.|+|||.+. +.++.++|||||||++|+|++ |.+||.+.....
T Consensus 169 ---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~ 245 (299)
T d1fgka_ 169 ---TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 245 (299)
T ss_dssp ---CTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH
T ss_pred ---cCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHH
Confidence 456789999999998764332 223457899999999886 569999999999999999998 799999998888
Q ss_pred HHHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
....+..+.... ....+++.+.+||.+||+.||++|||+.|+++
T Consensus 246 ~~~~i~~~~~~~---~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~ 289 (299)
T d1fgka_ 246 LFKLLKEGHRMD---KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 289 (299)
T ss_dssp HHHHHHTTCCCC---CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHcCCCCC---CCccchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence 888777654322 22578999999999999999999999999986
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-48 Score=372.95 Aligned_cols=250 Identities=22% Similarity=0.357 Sum_probs=214.6
Q ss_pred cccceeecceeeccCCeEEEEEEEcC-----CCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKD-----TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED 139 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~ 139 (520)
-.++|.+++.||+|+||+||+|.++. +++.||||++.... .......+.+|+.+++++. |||||++++++..
T Consensus 18 ~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~--~~~~~~~~~~E~~il~~l~-h~nIv~~~~~~~~ 94 (308)
T d1p4oa_ 18 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFN-CHHVVRLLGVVSQ 94 (308)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS--CHHHHHHHHHHHHHGGGCC-CTTBCCEEEEECS
T ss_pred cHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECccc--ChHHHHHHHHHHHHHHHcC-CCCEeeeeeEEec
Confidence 34789999999999999999998863 35789999986432 3344567899999999998 9999999999999
Q ss_pred CCeEEEEEeccCCCchHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCC
Q 010013 140 RHSVNLIMDLCAGGELFDRIIAK----------GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP 209 (520)
Q Consensus 140 ~~~~~lv~e~~~g~~L~~~l~~~----------~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~ 209 (520)
++..++||||+++|+|.+++... ..+++..+..++.|++.||.|||+++|+||||||+|||+ +.+.+
T Consensus 95 ~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLl---d~~~~ 171 (308)
T d1p4oa_ 95 GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV---AEDFT 171 (308)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEE---CTTCC
T ss_pred CCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceee---cCCce
Confidence 99999999999999999988643 247899999999999999999999999999999999999 56778
Q ss_pred eeEeecccccccCCCC---cccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhhC-CCCCCCCCHHHHHHHHHcC
Q 010013 210 LKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSG-VPPFWGETEQSIFDAILRG 284 (520)
Q Consensus 210 ~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~g-~~pf~~~~~~~~~~~~~~~ 284 (520)
+||+|||+++...... ......||+.|+|||.+. +.++.++||||||+++|+|+|| .+||.+.+..+.+..+.++
T Consensus 172 ~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~ 251 (308)
T d1p4oa_ 172 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG 251 (308)
T ss_dssp EEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTT
T ss_pred EEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC
Confidence 9999999998764332 223346899999999886 4588899999999999999998 5889999998888888876
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 285 HIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
..... .+.+++.+.++|.+||+.+|++|||+.++++
T Consensus 252 ~~~~~---p~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 287 (308)
T d1p4oa_ 252 GLLDK---PDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 287 (308)
T ss_dssp CCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCC---cccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 54322 2578899999999999999999999999997
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-48 Score=374.55 Aligned_cols=251 Identities=27% Similarity=0.390 Sum_probs=209.6
Q ss_pred ccceeecceeeccCCeEEEEEEEc-----CCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeC
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHK-----DTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDR 140 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~ 140 (520)
.++|.+++.||+|+||.||+|.++ .+++.||||++.... .......+.+|+.+++++.+|||||++++++.+.
T Consensus 22 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~ 99 (311)
T d1t46a_ 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHMNIVNLLGACTIG 99 (311)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECccc--CHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeC
Confidence 478999999999999999999864 456789999986543 3344567899999999996699999999999999
Q ss_pred CeEEEEEeccCCCchHHHHHhcC------------------CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEee
Q 010013 141 HSVNLIMDLCAGGELFDRIIAKG------------------HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFS 202 (520)
Q Consensus 141 ~~~~lv~e~~~g~~L~~~l~~~~------------------~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~ 202 (520)
+..++|||||++|+|.+++.... .+++..+..++.||+.||.|||++|++||||||+||+++
T Consensus 100 ~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~ 179 (311)
T d1t46a_ 100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT 179 (311)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE
T ss_pred CEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeeccccccccccc
Confidence 99999999999999999987643 589999999999999999999999999999999999995
Q ss_pred cCCCCCCeeEeecccccccCCCCc---ccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhh-CCCCCCCCCHHHH
Q 010013 203 SSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSI 277 (520)
Q Consensus 203 ~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~-g~~pf~~~~~~~~ 277 (520)
.++.+||+|||.++....... .....||+.|+|||++. +.++.++|||||||++|+|+| |.+||......+.
T Consensus 180 ---~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~ 256 (311)
T d1t46a_ 180 ---HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 256 (311)
T ss_dssp ---TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH
T ss_pred ---ccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHH
Confidence 467799999999987654322 23457899999999886 558999999999999999998 6777766665444
Q ss_pred HHHHHcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 278 FDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
+..+......... ...++..+.+||.+||+.||++|||+.++++
T Consensus 257 ~~~~i~~~~~~~~--~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~ 300 (311)
T d1t46a_ 257 FYKMIKEGFRMLS--PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300 (311)
T ss_dssp HHHHHHHTCCCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHhcCCCCCC--cccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 4444333322222 2467899999999999999999999999986
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=6.5e-48 Score=370.61 Aligned_cols=258 Identities=21% Similarity=0.291 Sum_probs=204.9
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
+.++|.+++.||+|+||.||+|.+..+|+.||||++..... .+.+.+|+++++.+.+|++|+.+.+++.+.+..+
T Consensus 5 vg~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ 79 (299)
T d1ckia_ 5 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 79 (299)
T ss_dssp ETTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT-----SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEE
T ss_pred ECCEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc-----CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEE
Confidence 45789999999999999999999999999999998865432 2347789999999985666777778888899999
Q ss_pred EEEeccCCCchHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCC
Q 010013 145 LIMDLCAGGELFDRII-AKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~-~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 223 (520)
+||||+. ++|.+.+. ..+.+++..+..++.|++.||.|||++||+||||||+|||++..+.+..+||+|||+|+.+..
T Consensus 80 ivme~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~ 158 (299)
T d1ckia_ 80 MVMELLG-PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 158 (299)
T ss_dssp EEEECCC-CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBC
T ss_pred EEEEEcC-CchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceeccc
Confidence 9999994 56655554 456799999999999999999999999999999999999997666677899999999998653
Q ss_pred CC--------cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCCHHHHHHHHH---cCCCCCC-C
Q 010013 224 GD--------VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL---RGHIDFS-S 290 (520)
Q Consensus 224 ~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~~~~~~~~---~~~~~~~-~ 290 (520)
.. ......||+.|+|||++.+ .++.++|||||||++|+|++|..||...........+. ......+ .
T Consensus 159 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (299)
T d1ckia_ 159 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIE 238 (299)
T ss_dssp TTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHH
T ss_pred cccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChh
Confidence 32 2234579999999999875 58999999999999999999999998765443322221 1111111 1
Q ss_pred CCCCCCCHHHHHHHHHhcccCCCCCCCHHHH---HcCCccc
Q 010013 291 DPWPNISSSAKDIVKKMLHADPKERLSAAEV---LNHPWMR 328 (520)
Q Consensus 291 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~---l~~~~~~ 328 (520)
...+.+|+++.+++.+||+.+|++||++.++ |+|+|.+
T Consensus 239 ~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~ 279 (299)
T d1ckia_ 239 VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 279 (299)
T ss_dssp HHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHH
T ss_pred HhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHH
Confidence 1235789999999999999999999998754 6666654
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-47 Score=366.55 Aligned_cols=245 Identities=23% Similarity=0.334 Sum_probs=200.6
Q ss_pred ecceeeccCCeEEEEEEEcCCC---cEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEe-CCeEEEE
Q 010013 71 FGRELGRGQFGVTYLVTHKDTK---QQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYED-RHSVNLI 146 (520)
Q Consensus 71 ~~~~lg~G~~g~Vy~~~~~~~~---~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~-~~~~~lv 146 (520)
+.+.||+|+||+||+|.+..++ ..||||++.. .......+.+.+|+.+|++++ ||||+++++++.. ++..++|
T Consensus 31 ~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~--~~~~~~~~~~~~E~~~l~~l~-HpnIv~~~g~~~~~~~~~~lv 107 (311)
T d1r0pa_ 31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVV 107 (311)
T ss_dssp EEEEEEEETTEEEEEEEECC----CEEEEEEEECC--CCCHHHHHHHHHHHHHHHTCC-CTTBCCCCEEEEETTTEEEEE
T ss_pred cceEEeecCCeEEEEEEEECCCCEEEEEEEEEECc--ccCHHHHHHHHHHHHHHHhCC-CCCEeEEeEEEEecCCceEEE
Confidence 3578999999999999987643 3689999853 234556788999999999998 9999999999765 5689999
Q ss_pred EeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEeecccccccCCCC
Q 010013 147 MDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD 225 (520)
Q Consensus 147 ~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 225 (520)
||||++++|.+++... ..+++..+..++.|++.||.|||+.||+||||||+|||+ +++..+||+|||+++......
T Consensus 108 ~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl---~~~~~~kL~DFG~~~~~~~~~ 184 (311)
T d1r0pa_ 108 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKE 184 (311)
T ss_dssp EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTCCEEECSSGGGCCTTTTT
T ss_pred EEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeE---CCCCCEEEecccchhhccccc
Confidence 9999999999988754 357889999999999999999999999999999999999 457789999999998764332
Q ss_pred -----cccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhhCCCCCCCC-CHHHHHHHHHcCCCCCCCCCCCCCCH
Q 010013 226 -----VFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGE-TEQSIFDAILRGHIDFSSDPWPNISS 298 (520)
Q Consensus 226 -----~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~g~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (520)
......||+.|+|||.+. +.++.++||||||+++|||++|..||... ...+....+..+..... .+.+++
T Consensus 185 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~~~~~---p~~~~~ 261 (311)
T d1r0pa_ 185 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ---PEYCPD 261 (311)
T ss_dssp CCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTCCCCC---CTTCCH
T ss_pred cccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCC---cccCcH
Confidence 122356899999999876 56899999999999999999977776554 34455566666544322 246789
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHcC
Q 010013 299 SAKDIVKKMLHADPKERLSAAEVLNH 324 (520)
Q Consensus 299 ~~~~li~~~l~~dp~~Rps~~~~l~~ 324 (520)
.+.+||.+||+.||++|||+.|+++|
T Consensus 262 ~l~~li~~cl~~dP~~RPs~~ei~~~ 287 (311)
T d1r0pa_ 262 PLYEVMLKCWHPKAEMRPSFSELVSR 287 (311)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 99999999999999999999999976
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=2.8e-46 Score=357.17 Aligned_cols=253 Identities=22% Similarity=0.289 Sum_probs=206.5
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
+.++|.+++.||+|+||+||+|++..+|+.||||++..... ...+.+|+++++.+.+|+|++.+++++......+
T Consensus 3 ig~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~ 77 (293)
T d1csna_ 3 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNV 77 (293)
T ss_dssp ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT-----SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEE
T ss_pred CCCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC-----cHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccE
Confidence 35789999999999999999999999999999998854321 2346789999999987799999999999999999
Q ss_pred EEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCC--CCCCeeEeeccccccc
Q 010013 145 LIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSA--EDSPLKATDFGLSVFF 221 (520)
Q Consensus 145 lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~--~~~~~kl~Dfg~a~~~ 221 (520)
+||||+ +++|.+.+...+ .++...+..++.|++.||.|||++||+||||||+|||++... ..+.+||+|||+|+..
T Consensus 78 ~vme~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~ 156 (293)
T d1csna_ 78 LVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 156 (293)
T ss_dssp EEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred EEEEec-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEc
Confidence 999999 789999887654 699999999999999999999999999999999999996532 3567999999999876
Q ss_pred CCCC--------cccccccCCCccCchhhcc-cCCCcchhHHHHHHHHHHhhCCCCCCCCC---HHHHHHHHHcCCCCC-
Q 010013 222 KPGD--------VFKDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGET---EQSIFDAILRGHIDF- 288 (520)
Q Consensus 222 ~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~Dv~slG~~l~~ll~g~~pf~~~~---~~~~~~~~~~~~~~~- 288 (520)
.... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.. .......+.......
T Consensus 157 ~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 236 (293)
T d1csna_ 157 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTP 236 (293)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSC
T ss_pred ccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCC
Confidence 4321 2334679999999999875 48999999999999999999999997643 223333332211111
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 289 SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 289 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
.....+.+|+++.+++..|+..+|++||+++.+.+
T Consensus 237 ~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~ 271 (293)
T d1csna_ 237 LRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG 271 (293)
T ss_dssp HHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred hHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 11123568899999999999999999999876643
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.9e-46 Score=356.26 Aligned_cols=245 Identities=22% Similarity=0.304 Sum_probs=189.5
Q ss_pred ccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHH--HHHHHHHHhccCCCCeeEEEEEEEeCC--
Q 010013 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDV--RREVQIMHHLTGHRNIVELKGAYEDRH-- 141 (520)
Q Consensus 66 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~--~~e~~~l~~l~~hp~iv~l~~~~~~~~-- 141 (520)
.++|.+.+.||+|+||.||+|++ +|+.||||++.... .+.. +.|+..+.+++ |||||++++++.+.+
T Consensus 2 ~~~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~------~~~~~~e~ei~~~~~~~-HpnIv~~~~~~~~~~~~ 72 (303)
T d1vjya_ 2 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE------ERSWFREAEIYQTVMLR-HENILGFIAADNKDNGT 72 (303)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGGG------HHHHHHHHHHHTSTTCC-CTTBCCEEEEEEEECSS
T ss_pred CcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc------hhHHHHHHHHHHHhhCC-CCcCcceEEEEEeCCCc
Confidence 46799999999999999999987 57899999985432 2333 34555556677 999999999987653
Q ss_pred --eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH--------cCCeeecCCCCcEEeecCCCCCCee
Q 010013 142 --SVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS--------MGVMHRDLKPENFLFSSSAEDSPLK 211 (520)
Q Consensus 142 --~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~--------~~ivH~Dlkp~NIll~~~~~~~~~k 211 (520)
.+++|||||++|+|.+++.+. ++++..+..++.|++.||.|||+ +||+||||||+|||+ +.++.+|
T Consensus 73 ~~~~~lv~Ey~~~g~L~~~l~~~-~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl---~~~~~~K 148 (303)
T d1vjya_ 73 WTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCC 148 (303)
T ss_dssp SEEEEEEEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEE---CTTSCEE
T ss_pred ceEEEEEEecccCCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEE---cCCCCeE
Confidence 689999999999999999764 69999999999999999999996 599999999999999 4577899
Q ss_pred EeecccccccCCCC-----cccccccCCCccCchhhccc-------CCCcchhHHHHHHHHHHhhCCCCCCCC-------
Q 010013 212 ATDFGLSVFFKPGD-----VFKDLVGSAYYVAPEVLRRN-------YGAEADIWSAGVILYILLSGVPPFWGE------- 272 (520)
Q Consensus 212 l~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~-------~~~~~Dv~slG~~l~~ll~g~~pf~~~------- 272 (520)
|+|||+++...... ......||+.|+|||++.+. ++.++|||||||++|||+||..||...
T Consensus 149 l~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~ 228 (303)
T d1vjya_ 149 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 228 (303)
T ss_dssp ECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTT
T ss_pred EEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccch
Confidence 99999998764432 22346799999999998643 466899999999999999998876321
Q ss_pred --------CHHHHHHHHHcCCCCCCC-CCC--CCCCHHHHHHHHHhcccCCCCCCCHHHHHc
Q 010013 273 --------TEQSIFDAILRGHIDFSS-DPW--PNISSSAKDIVKKMLHADPKERLSAAEVLN 323 (520)
Q Consensus 273 --------~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 323 (520)
........+......... ..+ ...+..+.+|+.+||+.||++|||+.|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~ 290 (303)
T d1vjya_ 229 YDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290 (303)
T ss_dssp TTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred hhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence 123333333332221111 111 112345889999999999999999999976
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.4e-42 Score=343.01 Aligned_cols=258 Identities=24% Similarity=0.462 Sum_probs=195.3
Q ss_pred cceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhcc----------CCCCeeEEEEE
Q 010013 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT----------GHRNIVELKGA 136 (520)
Q Consensus 67 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~----------~hp~iv~l~~~ 136 (520)
++|.+++.||+|+||+||+|+++.+|+.||||++.+.. ...+.+.+|+.+++.+. +|+||++++++
T Consensus 13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~----~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~ 88 (362)
T d1q8ya_ 13 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK----VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH 88 (362)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH----HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred CcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc----cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEE
Confidence 46999999999999999999999999999999996532 23466788999988885 26889999988
Q ss_pred EEe--CCeEEEEEeccCCCchHHHH---HhcCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeecCCCCcEEeecCCCC---
Q 010013 137 YED--RHSVNLIMDLCAGGELFDRI---IAKGHYSERAAANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAED--- 207 (520)
Q Consensus 137 ~~~--~~~~~lv~e~~~g~~L~~~l---~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~ivH~Dlkp~NIll~~~~~~--- 207 (520)
+.. ....+++++++..+...... .....+++..+..++.||+.||.|||+ .||+||||||+|||++..+..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~ 168 (362)
T d1q8ya_ 89 FNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENL 168 (362)
T ss_dssp EEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTE
T ss_pred eeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCccccc
Confidence 754 46677777777655433322 234568999999999999999999998 899999999999999753322
Q ss_pred CCeeEeecccccccCCCCcccccccCCCccCchhhc-ccCCCcchhHHHHHHHHHHhhCCCCCCCCCHH------HHHHH
Q 010013 208 SPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQ------SIFDA 280 (520)
Q Consensus 208 ~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~Dv~slG~~l~~ll~g~~pf~~~~~~------~~~~~ 280 (520)
..++++|||.+..... .....+||+.|+|||++. ..++.++||||+||++++|++|+.||...... .....
T Consensus 169 ~~~kl~dfg~s~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~ 246 (362)
T d1q8ya_ 169 IQIKIADLGNACWYDE--HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQ 246 (362)
T ss_dssp EEEEECCCTTCEETTB--CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHH
T ss_pred ceeeEeeccccccccc--ccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHH
Confidence 2489999999986543 335568999999999876 45899999999999999999999999754321 11111
Q ss_pred HHc--CC------------------C----CCCC--------------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHH
Q 010013 281 ILR--GH------------------I----DFSS--------------DPWPNISSSAKDIVKKMLHADPKERLSAAEVL 322 (520)
Q Consensus 281 ~~~--~~------------------~----~~~~--------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l 322 (520)
... +. . .... ......++.+.+||.+||..||.+|||++|+|
T Consensus 247 ~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L 326 (362)
T d1q8ya_ 247 IIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLV 326 (362)
T ss_dssp HHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHH
T ss_pred HHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence 100 00 0 0000 00122357899999999999999999999999
Q ss_pred cCCccccC
Q 010013 323 NHPWMRVD 330 (520)
Q Consensus 323 ~~~~~~~~ 330 (520)
+||||+..
T Consensus 327 ~Hp~f~~~ 334 (362)
T d1q8ya_ 327 NHPWLKDT 334 (362)
T ss_dssp TCGGGTTC
T ss_pred cCcccCCC
Confidence 99999843
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.92 E-value=6.5e-26 Score=201.29 Aligned_cols=167 Identities=18% Similarity=0.172 Sum_probs=123.5
Q ss_pred eeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccC-----C----------cccHHHHHHHHHHHHhccCCCCeeEE
Q 010013 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI-----N----------RDDVEDVRREVQIMHHLTGHRNIVEL 133 (520)
Q Consensus 69 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-----~----------~~~~~~~~~e~~~l~~l~~hp~iv~l 133 (520)
+.+++.||+|+||+||+|.+. +|+.||||++...... . ........+|...+.++. |++++..
T Consensus 2 ~~vg~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~v~~~ 79 (191)
T d1zara2 2 DAIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-GLAVPKV 79 (191)
T ss_dssp SEEEEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-TSSSCCE
T ss_pred chhCCEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHcc-CCCcceE
Confidence 568899999999999999985 5889999987532110 0 001233457888999998 8999988
Q ss_pred EEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCcEEeecCCCCCCeeEe
Q 010013 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKAT 213 (520)
Q Consensus 134 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~ 213 (520)
+++. . .+++|||+++..+.. ++...+..++.|++.+|.|||++||+||||||+|||++. ..++|+
T Consensus 80 ~~~~--~--~~lvme~~~~~~~~~-------l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~----~~~~li 144 (191)
T d1zara2 80 YAWE--G--NAVLMELIDAKELYR-------VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSE----EGIWII 144 (191)
T ss_dssp EEEE--T--TEEEEECCCCEEGGG-------CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEET----TEEEEC
T ss_pred EEec--C--CEEEEEeeccccccc-------hhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeC----CCEEEE
Confidence 7653 2 268999998876533 455667789999999999999999999999999999962 348999
Q ss_pred ecccccccCCCCcccccccCCCccC------chhhcccCCCcchhHHHHHHH
Q 010013 214 DFGLSVFFKPGDVFKDLVGSAYYVA------PEVLRRNYGAEADIWSAGVIL 259 (520)
Q Consensus 214 Dfg~a~~~~~~~~~~~~~gt~~y~a------PE~~~~~~~~~~Dv~slG~~l 259 (520)
|||.|........ ..|.. .+.+.+.|+.++|+||+.--+
T Consensus 145 DFG~a~~~~~~~~-------~~~l~rd~~~~~~~f~r~y~~~~d~~s~~~~~ 189 (191)
T d1zara2 145 DFPQSVEVGEEGW-------REILERDVRNIITYFSRTYRTEKDINSAIDRI 189 (191)
T ss_dssp CCTTCEETTSTTH-------HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred ECCCcccCCCCCc-------HHHHHHHHHHHHHHHcCCCCCcccHHHHHHHH
Confidence 9999977543221 11221 133456688999999986544
|
| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]
Probab=99.91 E-value=3.5e-24 Score=181.38 Aligned_cols=142 Identities=41% Similarity=0.680 Sum_probs=132.0
Q ss_pred hhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccc-hhhhH
Q 010013 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN-RVERE 444 (520)
Q Consensus 366 ~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~-~~~~~ 444 (520)
+++++++++|+++|..+|.+++|+|+.+||..++...+..++...+..++..+|.+++|.|+|+||+..+.... .....
T Consensus 2 ~lt~~e~~~l~~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~ 81 (146)
T d1exra_ 2 QLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSE 81 (146)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHhhccChH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999775432 23456
Q ss_pred HHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHH
Q 010013 445 EHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507 (520)
Q Consensus 445 ~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~ 507 (520)
+.++.+|+.+|.|++|+|+.+||+.++..+|.. +++++.++|+.+|.|+||+|+|+||+++|.
T Consensus 82 ~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~i~~~~D~d~dG~i~~~eF~~~l~ 145 (146)
T d1exra_ 82 EELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMV 145 (146)
T ss_dssp HHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhcCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhc
Confidence 789999999999999999999999999999988 889999999999999999999999999985
|
| >d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.90 E-value=1.9e-23 Score=176.65 Aligned_cols=143 Identities=38% Similarity=0.614 Sum_probs=132.0
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccc-hhhh
Q 010013 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN-RVER 443 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~-~~~~ 443 (520)
+.++++++.+++++|+.+|.|++|+|+.+||..++...|..++..++..++..++.++.+.++|++|...+.... ...+
T Consensus 2 ~~ls~~~i~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (146)
T d1lkja_ 2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDS 81 (146)
T ss_dssp CCCCHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCSSSCCEEEHHHHHHHHHHHTCCCCH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhcCCCCCHHHHHHHHHHhccCCcccccHHHHHHHHHHhhccccH
Confidence 467899999999999999999999999999999999999999999999999999999999999999998765432 3345
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.+.++.+|+.||+|++|+|+.+||+.++..+|.. ++++++++|..+| |+||+|+|+||+++|++
T Consensus 82 ~~~~~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dG~I~~~eF~~~m~k 146 (146)
T d1lkja_ 82 EQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALLSK 146 (146)
T ss_dssp HHHHHHHHHHHCSSSSCEEEHHHHHHHHHHHTCSCCHHHHHHHHHHHC-CSSSEEEHHHHHHHHCC
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCcccHHHHHHHHHhcc-CCCCeEeHHHHHHHhCC
Confidence 6789999999999999999999999999999998 8999999999999 99999999999999863
|
| >d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=99.89 E-value=1.7e-23 Score=175.77 Aligned_cols=137 Identities=22% Similarity=0.491 Sum_probs=125.2
Q ss_pred hhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhc-cchhhhHH
Q 010013 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH-MNRVEREE 445 (520)
Q Consensus 367 ~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~-~~~~~~~~ 445 (520)
++++++++++++|..+|.|++|.|+.+||..+|+.+|..++.+++..++. +++|.|+|.+|+.++.. .......+
T Consensus 1 L~~~qi~e~~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~el~~~~~----~~~~~i~~~eF~~~~~~~~~~~~~~~ 76 (142)
T d1wdcb_ 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLSGTDSEE 76 (142)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTCSCCCHH
T ss_pred CCHHHHHHHHHHHHHHcCCCCCcCChHHHHHHHHHhhcCCCHHHHHHHHH----hccCccccccccccccccccccchhh
Confidence 57899999999999999999999999999999999999999999988874 56899999999998764 33445578
Q ss_pred HHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 446 HLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 446 ~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.++.+|+.||.|++|+|+.+||+.+|..+|.. +++++.++|+.+|.| +|+|+|+||+++|+.
T Consensus 77 ~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d~~-~G~I~y~eF~~~l~~ 139 (142)
T d1wdcb_ 77 TIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKG 139 (142)
T ss_dssp HHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHHT
T ss_pred hHHHhhhhhcccCCCcccHHHHHHHHHHccccCCHHHHHHHHHHhCCC-CCEEcHHHHHHHHhc
Confidence 89999999999999999999999999999988 899999999999988 699999999999976
|
| >d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=1.3e-22 Score=170.48 Aligned_cols=139 Identities=29% Similarity=0.586 Sum_probs=128.8
Q ss_pred hHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc-chhhhHHH
Q 010013 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM-NRVEREEH 446 (520)
Q Consensus 368 ~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~-~~~~~~~~ 446 (520)
|+++.++++++|..+|.|++|+|+..||..++...+..++...+..++..+|.+++|.|++.||...+... ......+.
T Consensus 1 t~~~~~elk~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~ 80 (141)
T d2obha1 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEE 80 (141)
T ss_dssp CHHHHHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCCeEeHHHHHHHHHhcCCchhHHHHHHHHHhhccCCCCeechHHHHHHHHHHHhhhccHHH
Confidence 46788899999999999999999999999999999999999999999999999999999999999977543 23345678
Q ss_pred HHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHH
Q 010013 447 LYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMM 506 (520)
Q Consensus 447 ~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l 506 (520)
++.+|+.+|.+++|.|+..||..++..+|.. +++++..+|+.+|.|+||.|+|+||+++|
T Consensus 81 l~~~f~~~d~~~~G~i~~~el~~~l~~~g~~l~~~e~~~l~~~~D~d~dG~i~~~EF~~~m 141 (141)
T d2obha1 81 ILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIM 141 (141)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHH
T ss_pred HHHHHHHhcccCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCCEeHHHHHHhC
Confidence 9999999999999999999999999999988 99999999999999999999999999986
|
| >d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.88 E-value=1.5e-22 Score=174.34 Aligned_cols=145 Identities=34% Similarity=0.594 Sum_probs=131.6
Q ss_pred HhhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc----c
Q 010013 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM----N 439 (520)
Q Consensus 364 ~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~----~ 439 (520)
...++++++.+++++|..+|+|++|+|+.+||..++...+..++...+..++..+|.+++|.+++.||...+... .
T Consensus 11 ~~~ls~~~i~el~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~e~~~~~~~~~~~~~ 90 (162)
T d1topa_ 11 RAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDA 90 (162)
T ss_dssp HHHSCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHH
T ss_pred HccCCHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHhccCCchhHHHHHhhhheeccCCCCCeeeehhhhhhhhhhhhhc
Confidence 356889999999999999999999999999999999999999999999999999999999999999998765432 2
Q ss_pred hhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 440 RVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 440 ~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.....+.++.+|+.||.|++|+|+.+||+.++...+.. +.++++.+|..+|.|+||.|+|+||+++|+.
T Consensus 91 ~~~~~~~~~~aF~~~D~d~~G~Is~~e~~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~ 160 (162)
T d1topa_ 91 KGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 160 (162)
T ss_dssp HHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHS
T ss_pred ccCcHHHHHHHHHHHCCCCCCCCcHHHHHHHHHhhCCCCCHHHHHHHHHHhCCCCCCcEEHHHHHHHHHc
Confidence 22345678889999999999999999999999999887 8889999999999999999999999999874
|
| >d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=99.87 E-value=1.5e-22 Score=172.20 Aligned_cols=142 Identities=25% Similarity=0.415 Sum_probs=125.7
Q ss_pred hhHHHHhhHHHHhcccCC--CCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccc--hhh
Q 010013 367 LSEEEIMGLKEMFKSMDT--DNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN--RVE 442 (520)
Q Consensus 367 ~~~~~~~~l~~~F~~~D~--~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~--~~~ 442 (520)
+|++++++++++|..||. |++|.|+.+||..+|+.+|..++.+++..+. ..+.+++|.|+|+||+.++.... ...
T Consensus 1 Ls~eqi~~l~~~F~~fD~~~~~dG~I~~~el~~~l~~lG~~~t~~e~~~~~-~~~~~~~~~i~~~eFl~~~~~~~~~~~~ 79 (152)
T d1wdcc_ 1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVG-GTHKMGEKSLPFEEFLPAYEGLMDCEQG 79 (152)
T ss_dssp CCHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHTT-CCSSTTSCEECHHHHHHHHHHHTTSCCC
T ss_pred CCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHHhccCccHhhhhhhh-hhhccccccccccccccccccccccchh
Confidence 578899999999999995 8999999999999999999999999998764 45788899999999999876432 235
Q ss_pred hHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCC--CCcceeHHHHHHHHHcC
Q 010013 443 REEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDID--NDGRINYEEFAAMMRKG 509 (520)
Q Consensus 443 ~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~--~dg~i~~~ef~~~l~~~ 509 (520)
..+.+..+|+.||.+++|+|+.+||+.+|..+|.. ++++++++++.+|.+ ++|.|+|+||++.|..+
T Consensus 80 ~~~~l~~aF~~~D~~~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~d~~~d~~G~I~y~eF~~~~~~~ 149 (152)
T d1wdcc_ 80 TFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAG 149 (152)
T ss_dssp CHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHHC
T ss_pred HHHhhhhhhhccccccCccchHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCEEEHHHHHHHHhcC
Confidence 56789999999999999999999999999999998 999999999999865 46899999999998763
|
| >d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.87 E-value=2.7e-22 Score=171.51 Aligned_cols=144 Identities=33% Similarity=0.573 Sum_probs=128.7
Q ss_pred HhhhhHHHHhhHHHHhcccCCCC-CCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhc----c
Q 010013 364 AENLSEEEIMGLKEMFKSMDTDN-SGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH----M 438 (520)
Q Consensus 364 ~~~~~~~~~~~l~~~F~~~D~~~-~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~----~ 438 (520)
..+++++++++++++|..+|.|+ ||.|+..||..+|+.+|..++..++..++..++.+++|.+++.+|...+.. .
T Consensus 5 ~~~Lt~~~~~~l~~~F~~~D~d~~dG~I~~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (156)
T d1dtla_ 5 VEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDD 84 (156)
T ss_dssp GGGSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC--
T ss_pred HHHCCHHHHHHHHHHHHHHcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhhccCCCccchhhhhhhhhhccccc
Confidence 35789999999999999999995 899999999999999999999999999999999999999999999875432 2
Q ss_pred chhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHH
Q 010013 439 NRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507 (520)
Q Consensus 439 ~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~ 507 (520)
......+.++.+|+.||.|++|+|+.+||+.++..+|.. ++++++++|+.+|.|+||.|+|+||+++|+
T Consensus 85 ~~~~~~~~l~~~F~~~D~d~~G~I~~~e~~~~~~~~~~~ls~~e~~~i~~~~D~d~dG~I~~~eF~~~l~ 154 (156)
T d1dtla_ 85 SKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 154 (156)
T ss_dssp ---CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHhCcCCCCcCcHHHHHHHHhhcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHc
Confidence 233556789999999999999999999999999999988 899999999999999999999999999986
|
| >d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.87 E-value=3.2e-22 Score=168.66 Aligned_cols=141 Identities=24% Similarity=0.406 Sum_probs=123.6
Q ss_pred hhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhc-cchhhhHH
Q 010013 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH-MNRVEREE 445 (520)
Q Consensus 367 ~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~-~~~~~~~~ 445 (520)
|+++++.+++++|..+|.+++|.|+.+||..+|..+|..++..+ ++..++.+++|.|+|.+|+.++.. .......+
T Consensus 1 f~~~qi~el~e~F~~~D~~~~G~I~~~e~~~~l~~lg~~~~~~~---~~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~~~ 77 (145)
T d2mysb_ 1 FDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNE---ELDAMIKEASGPINFTVFLTMFGEKLKGADPED 77 (145)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCcchHH---HHHHHHHhccCceeechhhhhhhhcccccchHH
Confidence 57889999999999999999999999999999999997655543 344455678899999999997754 34445567
Q ss_pred HHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHcCC
Q 010013 446 HLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGN 510 (520)
Q Consensus 446 ~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~~~ 510 (520)
.++.+|+.||.+++|+|+.+||+++|..+|.. +++++.+++..+|.|+||+|+|.||+++|.+++
T Consensus 78 ~l~~aF~~fD~~~~g~I~~~el~~~l~~~g~~ls~~e~~~~~~~~d~d~dg~I~y~eF~~~l~~~~ 143 (145)
T d2mysb_ 78 VIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITHGE 143 (145)
T ss_pred HHHHHHHhhhhcccchhhHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhccCC
Confidence 89999999999999999999999999999988 999999999999999999999999999998743
|
| >d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=99.87 E-value=5.5e-23 Score=180.27 Aligned_cols=144 Identities=63% Similarity=1.005 Sum_probs=132.5
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhH
Q 010013 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVERE 444 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~ 444 (520)
..|+++++++|+++|+.+|.|++|+|+.+||..++..++..++..+++.++..+|.+++|.|+|.+|+..+.........
T Consensus 2 ~~Lt~~ei~~l~~~F~~~D~d~dG~Is~~e~~~~l~~l~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~ 81 (182)
T d1s6ia_ 2 ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLERE 81 (182)
T ss_dssp CSSSCTTTCSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCC
T ss_pred CCCCHHHHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHcCCccccccchhhhhhhhccccccchHHHHHHHHHhhcccccH
Confidence 46889999999999999999999999999999999999999999999999999999999999999999877655555556
Q ss_pred HHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcceeHHHHHHHHHcC
Q 010013 445 EHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRKG 509 (520)
Q Consensus 445 ~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~~ 509 (520)
+.++.+|+.+|.+++|+|+..||+.++..++. ++++++.+|+.+|.|+||.|+|+||+++|+..
T Consensus 82 e~l~~aF~~~D~d~~G~i~~~el~~~l~~~gl-~~~ev~~~f~~~D~d~DG~Is~~EF~~~m~~~ 145 (182)
T d1s6ia_ 82 ENLVSAFSYFDKDGSGYITLDEIQQACKDFGL-DDIHIDDMIKEIDQDNDGQIDYGEFAAMMRKR 145 (182)
T ss_dssp CSTHHHHHHTTTTCSSEEEHHHHHHTTTTTTC-CTTHHHHHHHHHCSSSSSEEETTHHHHTTSCC
T ss_pred HHHHHHHHHHhhcCCCccchhhhhhhhhhcCc-cHHHHHHHHHHhhcCCCCeEeHHHHHHHHHhC
Confidence 67899999999999999999999999998875 55789999999999999999999999999874
|
| >d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: EHCABP species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]
Probab=99.86 E-value=7e-22 Score=164.41 Aligned_cols=128 Identities=28% Similarity=0.457 Sum_probs=116.0
Q ss_pred HHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc---chhhhHHHHHHHHh
Q 010013 376 KEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM---NRVEREEHLYKAFE 452 (520)
Q Consensus 376 ~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~---~~~~~~~~~~~~F~ 452 (520)
+.+|+.+|.|+||.|+.+||..++..++...+.++++.+|..+|.+++|.|+|+||+.++... ........++.+|+
T Consensus 3 e~~F~~~D~d~dG~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~F~ 82 (134)
T d1jfja_ 3 EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYK 82 (134)
T ss_dssp HHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCcCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhhhccccccccccccccccccccccccccccccccccc
Confidence 689999999999999999999999999999999999999999999999999999999987643 22344567899999
Q ss_pred hhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcceeHHHHHHHH
Q 010013 453 YFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMM 506 (520)
Q Consensus 453 ~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~l 506 (520)
.+|.|++|+|+.+||..++..++. +.+.++|..+|.|+||+|+|+||+++|
T Consensus 83 ~~D~~~~g~i~~~el~~~~~~~~~---~~~~~~~~~~D~d~dG~is~~EF~~~~ 133 (134)
T d1jfja_ 83 LMDVDGDGKLTKEEVTSFFKKHGI---EKVAEQVMKADANGDGYITLEEFLEFS 133 (134)
T ss_dssp HHCCSSSSEEEHHHHHHHHTTTTC---HHHHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred ccccccCCcccHHHHHHHHHhcCc---HHHHHHHHHHCCCCCCCCCHHHHHHHh
Confidence 999999999999999999987664 578889999999999999999999987
|
| >d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.86 E-value=5.9e-22 Score=167.12 Aligned_cols=134 Identities=22% Similarity=0.365 Sum_probs=119.2
Q ss_pred hhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCC--CCCceehhhhHHHhhccc---hhhhHHHH
Q 010013 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVD--GNGTIDYIEFITATMHMN---RVEREEHL 447 (520)
Q Consensus 373 ~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~--~~g~i~~~ef~~~~~~~~---~~~~~~~~ 447 (520)
.+++++|+.+|.|++|.|+.+||..+|+.+|..++.+++..++..++.+ ++|.|+|.||..++.... .....+.+
T Consensus 4 eelke~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~l 83 (145)
T d2mysc_ 4 DDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLPMLQAAANNKDQGTFEDF 83 (145)
T ss_pred HHHHHHHHHHcCCCCCeECHHHHHHHHHHhhhcchhhhhHHHHHHHhhcccccCccchhHHHHHHhhhhhccccchHHHH
Confidence 5688999999999999999999999999999999999999999988665 688999999998775422 22456679
Q ss_pred HHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHH
Q 010013 448 YKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507 (520)
Q Consensus 448 ~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~ 507 (520)
..+|+.||.|++|+|+.+||+.+|..+|.. ++++++.+++. |.|+||+|+|+||++.|-
T Consensus 84 ~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~-~~d~dG~I~y~eF~~~ll 143 (145)
T d2mysc_ 84 VEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG-QEDSNGCINYEAFVKHIM 143 (145)
T ss_pred HHHHHHhhcCCCCEEcHHHHHHHHHHhCCCCCHHHHHHHHhh-cCCCCCeEEHHHHHHHHh
Confidence 999999999999999999999999999988 88999999975 789999999999999874
|
| >d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Cdc4p species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.85 E-value=6.7e-22 Score=165.42 Aligned_cols=132 Identities=23% Similarity=0.380 Sum_probs=117.9
Q ss_pred HhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccc---hhhhHHHHH
Q 010013 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN---RVEREEHLY 448 (520)
Q Consensus 372 ~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~---~~~~~~~~~ 448 (520)
..+++++|..+|.|++|.|+.+||..+|+.+|.+++.+++..+ +.+++|.|+|++|+.++.... .....+.++
T Consensus 4 ~~~fke~F~~~D~d~dG~I~~~el~~~l~~lg~~~t~~ei~~~----~~~~~~~i~~~eF~~~~~~~~~~~~~~~~~~l~ 79 (140)
T d1ggwa_ 4 DSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEI----ESTLPAEVDMEQFLQVLNRPNGFDMPGDPEEFV 79 (140)
T ss_dssp CTTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHHH----HTTSCSSEEHHHHHHHHCTTSSSSSSCCHHHHH
T ss_pred HHHHHHHHHHHCCCCCCeECHHHHHHHHHHHHhhhHHHhhhhh----hccccccccchhhhhhhhhhhhcchhhHHHHHH
Confidence 3578999999999999999999999999999999999887654 678899999999999876432 234467799
Q ss_pred HHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 449 KAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 449 ~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.+|+.||.|++|+|+.+||+.+|..+|.. ++++++++++.+|.+ ||.|+|+||+++|..
T Consensus 80 ~aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d~~-dG~I~y~eF~~~m~s 139 (140)
T d1ggwa_ 80 KGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK-DGMVNYHDFVQMILA 139 (140)
T ss_dssp HHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTCS-SCCSTTTHHHHHHHC
T ss_pred HHHHHHhccCCCcchHHHHHHHHHHcCCCCCHHHHHHHHHhhCCC-CCEEeHHHHHHHHhc
Confidence 99999999999999999999999999988 999999999999988 999999999999864
|
| >d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Programmed cell death 6 protein-like protein species: Leishmania major [TaxId: 5664]
Probab=99.84 E-value=6e-21 Score=167.09 Aligned_cols=131 Identities=23% Similarity=0.391 Sum_probs=121.9
Q ss_pred HHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHH
Q 010013 371 EIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKA 450 (520)
Q Consensus 371 ~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~ 450 (520)
+.++|.++|+.+|.|++|+|+.+||..+|..++..++.++++.++..+|.|++|+|+|++|+..+.. ...+..+
T Consensus 16 ~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~s~~~~~~l~~~~d~d~~~~i~~~ef~~~~~~------~~~~~~~ 89 (182)
T d1y1xa_ 16 DNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHF------ILSMREG 89 (182)
T ss_dssp TTSCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH------HHHHHHH
T ss_pred cHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHhcccCchhhhhhhhcccccccccccccccccccccc------ccccccc
Confidence 3468999999999999999999999999999999999999999999999999999999999886642 3467889
Q ss_pred HhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHH
Q 010013 451 FEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507 (520)
Q Consensus 451 F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~ 507 (520)
|+.+|.+++|+|+.+||+.++..+|.. ++++++.+|+.+|.|+||.|+|+||++++.
T Consensus 90 F~~~D~~~~g~I~~~el~~~l~~~g~~ls~~e~~~i~~~~d~~~dg~I~~~eF~~~~~ 147 (182)
T d1y1xa_ 90 FRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSI 147 (182)
T ss_dssp HHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred hhccccccchhhhhHHHHHHHHHhCCchhHHHHHHHHhhcccCCCCCcCHHHHHHHHH
Confidence 999999999999999999999999988 899999999999999999999999999874
|
| >d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Light Chain Mlc1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.84 E-value=1.6e-21 Score=164.64 Aligned_cols=135 Identities=20% Similarity=0.392 Sum_probs=117.7
Q ss_pred hHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHH-hcCCCCCceehhhhHHHhhccc------hhhhHHH
Q 010013 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEA-ADVDGNGTIDYIEFITATMHMN------RVEREEH 446 (520)
Q Consensus 374 ~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~-~d~~~~g~i~~~ef~~~~~~~~------~~~~~~~ 446 (520)
.++++|..+|.|++|+|+.+||..+|+.+|..++.++++.++.. .+.+.+|.|+|++|..++.... .....+.
T Consensus 3 ~~k~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~ei~~l~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~~~~ 82 (146)
T d1m45a_ 3 ANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTED 82 (146)
T ss_dssp CCTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTHH
T ss_pred HHHHHHHHHcCCCcCCCCHHHHHHHHHHcCCchhHHHHhhhhccccccccccccccchhhhhhhhhcccccccccchHHH
Confidence 46789999999999999999999999999999999999999975 4566679999999999765321 1233467
Q ss_pred HHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 447 LYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 447 ~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
+..+|+.+|.+++|+|+.+||+.+|..+|.. +++++..+|..+|.|+||.|+|+||++.|.+
T Consensus 83 l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~l~~~ei~~l~~~~D~d~dG~I~y~eF~~~i~~ 145 (146)
T d1m45a_ 83 FVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVLR 145 (146)
T ss_dssp HHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHC
T ss_pred HHHHHHhhccccccccchhhhhhhhcccCCcchHHHHHHHHHHhCCCCCCcEEHHHHHHHHHc
Confidence 9999999999999999999999999999988 8999999999999999999999999987754
|
| >d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin regulatory subunit (B-chain) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.84 E-value=4.9e-21 Score=165.12 Aligned_cols=142 Identities=32% Similarity=0.547 Sum_probs=121.1
Q ss_pred HHhhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccc-hh
Q 010013 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN-RV 441 (520)
Q Consensus 363 i~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~-~~ 441 (520)
|.+.++++++++|.++|+.+|.|++|+|+.+||..++..... ..++.+|..+|.+++|.|+|+||+.++.... ..
T Consensus 6 ~~t~ft~eei~~l~~~F~~~D~d~~G~I~~~E~~~~~~~~~~----~~~~~l~~~~d~~~~g~i~~~EFl~~~~~~~~~~ 81 (165)
T d1auib_ 6 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQN----PLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKG 81 (165)
T ss_dssp CCCSCCHHHHHHHHHHHHHHCTTCCSEECHHHHTTSHHHHTC----TTHHHHHHHHCTTCSSSEEHHHHHHHHGGGCTTC
T ss_pred HcCCCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHhhhccCC----HHHHHHHHHHccccchhhhhhhhhhhccccccch
Confidence 356799999999999999999999999999999887654332 2467899999999999999999999887643 33
Q ss_pred hhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhc-CCC-----CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKY-NMG-----DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 442 ~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~-~~~-----~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.....++.+|+.+|.|++|+|+.+|+.++++.. +.. .++.+..+|..+|.|+||.|+++||+++|+.
T Consensus 82 ~~~~~~~~~f~~~d~d~~g~Is~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dG~Is~~EF~~i~~~ 154 (165)
T d1auib_ 82 DKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGG 154 (165)
T ss_dssp CHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHCTTSSSSEEHHHHHHHHGG
T ss_pred hhHHHHHHHHHHhcccccccccHHHHHHHHHHhccccCchHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHHhc
Confidence 456789999999999999999999999999764 332 2455788999999999999999999999985
|
| >d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Guanylate cyclase activating protein 2, GCAP-2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.83 E-value=1.9e-20 Score=165.19 Aligned_cols=142 Identities=25% Similarity=0.397 Sum_probs=120.3
Q ss_pred hhHHHHhhHHHHhcccCCC-CCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHH
Q 010013 367 LSEEEIMGLKEMFKSMDTD-NSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREE 445 (520)
Q Consensus 367 ~~~~~~~~l~~~F~~~D~~-~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~ 445 (520)
.+.....+|+++|+.|+.+ ++|.|+.+||.+++...+...+...++.+|..+|.|++|.|+|.||+.++.........+
T Consensus 15 ~~~~~~~ei~~~~~~F~~~~~~G~i~~~Ef~~~l~~~~~~~~~~~~~~lf~~~D~d~dG~I~f~Ef~~~l~~~~~~~~~~ 94 (189)
T d1jbaa_ 15 VGAADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEH 94 (189)
T ss_dssp CCHHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTH
T ss_pred cCccCHHHHHHHHHHhcccCCCCeeeHHHHHHHHHHcCCCccHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccchHH
Confidence 4445555666666666544 589999999999999999888999999999999999999999999999887766666678
Q ss_pred HHHHHHhhhcCCCCCceeHHHHHHHHHhcC-----------------CC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHH
Q 010013 446 HLYKAFEYFDKDNSGYITMEELEHALKKYN-----------------MG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507 (520)
Q Consensus 446 ~~~~~F~~~D~d~dG~I~~~El~~~l~~~~-----------------~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~ 507 (520)
.++.+|+.||.|++|.|+..|+..++..+. .. .++.++.+|..+|.|+||.|+|+||+++++
T Consensus 95 ~~~~~F~~~D~d~~g~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~if~~~D~d~dG~Is~~EF~~~~~ 174 (189)
T d1jbaa_ 95 KLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGAR 174 (189)
T ss_dssp HHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHHHHT
T ss_pred HHHHHHhhhccCCCCcccHhHHHHHHHHHHHhhccccccchhhhhccccchHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence 899999999999999999999998875431 11 245678999999999999999999999998
Q ss_pred c
Q 010013 508 K 508 (520)
Q Consensus 508 ~ 508 (520)
+
T Consensus 175 ~ 175 (189)
T d1jbaa_ 175 R 175 (189)
T ss_dssp T
T ss_pred h
Confidence 6
|
| >d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=6.6e-21 Score=159.41 Aligned_cols=132 Identities=23% Similarity=0.395 Sum_probs=113.7
Q ss_pred hHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcC--CCCCceehhhhHHHhhcc---chhhhHHHHH
Q 010013 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADV--DGNGTIDYIEFITATMHM---NRVEREEHLY 448 (520)
Q Consensus 374 ~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~--~~~g~i~~~ef~~~~~~~---~~~~~~~~~~ 448 (520)
+++++|..+|.+++|.|+.+||..+|+.+|..++++++..++..++. +++|.|+|.+|..++... ......+.+.
T Consensus 1 e~ke~F~~~D~d~~G~I~~~el~~~l~~lg~~~t~~e~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~l~ 80 (139)
T d1w7jb1 1 EFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYEDYL 80 (139)
T ss_dssp CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--------CCH
T ss_pred CHHHHHHHHhCCCCCeECHHHHHHHHHHhccCCCHHHHHHHHHHHhcccccCCceeeeccchhhHhhhhhccccHHHHHH
Confidence 47899999999999999999999999999999999999999887764 578999999999876532 1223455688
Q ss_pred HHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHH
Q 010013 449 KAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMM 506 (520)
Q Consensus 449 ~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l 506 (520)
.+|+.+|.|++|+|+.+||+.++..+|.. ++++++.++.. |.|+||.|+|+||++.|
T Consensus 81 ~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~-~~d~dg~I~~~eF~~~l 138 (139)
T d1w7jb1 81 EGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAG-HEDSNGCINYEAFLKHI 138 (139)
T ss_dssp HHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTT-CCCTTSEEEHHHHHHHT
T ss_pred HhhhhccCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHhh-CCCCCCeEeHHHHHHHh
Confidence 99999999999999999999999999988 88889988875 88999999999999875
|
| >d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Apoptosis-linked protein alg-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.82 E-value=7.9e-20 Score=159.73 Aligned_cols=132 Identities=23% Similarity=0.375 Sum_probs=120.0
Q ss_pred HHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCC-CCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHH
Q 010013 370 EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTR-LSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLY 448 (520)
Q Consensus 370 ~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~-~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~ 448 (520)
.+..+|..+|+.+|.|++|+|+.+||..+|..++.. .+.++++.++..+|.+++|.|+|+||+.++... ..++
T Consensus 16 ~~~~~L~~iF~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EFl~~~~~~------~~~~ 89 (181)
T d1hqva_ 16 PDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYI------TDWQ 89 (181)
T ss_dssp SCHHHHHHHHHHHCTTCCSSBCHHHHHHHCCCSSSSCCCHHHHHHHHHHHCCSSSSSBCHHHHHHHHHHH------HHHH
T ss_pred ccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCcccHHHHHHHhhccccccccchhhhHHHhhhhhc------cccc
Confidence 345679999999999999999999999999988754 688999999999999999999999999877532 4578
Q ss_pred HHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHH
Q 010013 449 KAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507 (520)
Q Consensus 449 ~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~ 507 (520)
.+|+.+|.+++|.|+.+||+.++...+.. ++++++.++..+|.+++|+|+|+||+.++.
T Consensus 90 ~~f~~~D~~~~G~i~~~el~~~l~~~~~~l~~e~~~~~~~~~d~~~dg~Is~~eF~~~~~ 149 (181)
T d1hqva_ 90 NVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCI 149 (181)
T ss_dssp HHHHHHCTTCCSSBCHHHHHHHHHHHTBCCCHHHHHHHHHHHCSSCSSCBCHHHHHHHHH
T ss_pred cccccccccccchhhhHHHHHHHHHcCCcchhHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 89999999999999999999999999887 889999999999999999999999998774
|
| >d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin B-like protein 2 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.81 E-value=5.5e-20 Score=161.29 Aligned_cols=148 Identities=24% Similarity=0.422 Sum_probs=124.4
Q ss_pred HhhhhHHHHhhHHHHhcccCCC--CCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccc-h
Q 010013 364 AENLSEEEIMGLKEMFKSMDTD--NSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN-R 440 (520)
Q Consensus 364 ~~~~~~~~~~~l~~~F~~~D~~--~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~-~ 440 (520)
.+.|+.+++..|.+.|..+|.+ ++|.|+.+||..++...+...+ ..++.+|..+|.|++|.|+|+||+.++.... .
T Consensus 8 ~t~Fs~~ei~~L~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~-~~~~~lf~~~d~~~dg~I~f~EFl~~l~~~~~~ 86 (183)
T d2zfda1 8 DTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKES-LFADRVFDLFDTKHNGILGFEEFARALSVFHPN 86 (183)
T ss_dssp HSSCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHSCSSCCC-HHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTT
T ss_pred hCCCCHHHHHHHHHHHHHHCcCCCCCCcCcHHHHHHHHHhcCCCCC-HHHHHHHHHHccCCCCcCcHHHHHHHHHhhhcc
Confidence 4679999999999999999876 6999999999999987776554 4679999999999999999999999876543 3
Q ss_pred hhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhc----CCC-CH----HHHHHHHHHhcCCCCcceeHHHHHHHHHcCCC
Q 010013 441 VEREEHLYKAFEYFDKDNSGYITMEELEHALKKY----NMG-DA----KTIKEIIAEVDIDNDGRINYEEFAAMMRKGNP 511 (520)
Q Consensus 441 ~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~----~~~-~~----~~~~~~~~~~d~~~dg~i~~~ef~~~l~~~~~ 511 (520)
....+.++.+|+.||.|++|.|+.+|++.++... +.. ++ +.+..+|..+|.|+||.|+|+||.+++.+ .|
T Consensus 87 ~~~~~~~~~~F~~~D~d~~G~Is~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~~-~p 165 (183)
T d2zfda1 87 APIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLR-HP 165 (183)
T ss_dssp SCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHHHH-SG
T ss_pred CcHHHHHHHhhcccccCCCCCccHHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH-CH
Confidence 4556789999999999999999999999987643 433 33 33677899999999999999999999987 44
Q ss_pred CC
Q 010013 512 DM 513 (520)
Q Consensus 512 ~~ 513 (520)
+.
T Consensus 166 ~~ 167 (183)
T d2zfda1 166 SL 167 (183)
T ss_dssp GG
T ss_pred HH
Confidence 43
|
| >d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Neurocalcin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.80 E-value=1.3e-19 Score=158.80 Aligned_cols=142 Identities=27% Similarity=0.397 Sum_probs=122.9
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCC-HHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhh
Q 010013 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLS-ESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVER 443 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~-~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~ 443 (520)
..++.++++++.+.|.. .+++|.|+.+||..++..++.... ...++++|..+|.+++|.|+|+||+.++........
T Consensus 16 t~fs~~ei~~l~~~F~~--~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~i~~~eFl~~~~~~~~~~~ 93 (181)
T d1bjfa_ 16 TDFTEHEIQEWYKGFLR--DCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKL 93 (181)
T ss_dssp SSCCHHHHHHHHHHHHH--HSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSCH
T ss_pred cCCCHHHHHHHHHHHHh--hCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHhhhch
Confidence 46899999988888854 567899999999999998875544 456799999999999999999999998877666667
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCC------------C-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNM------------G-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~------------~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.+.++.+|+.||.|++|+|+.+|+..++..+.. . .++.++.+|..+|.|+||.|+|+||.+.+.+
T Consensus 94 ~~~~~~~f~~~D~d~dg~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~~ 171 (181)
T d1bjfa_ 94 EQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKS 171 (181)
T ss_dssp HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCeecHHHHHHHHHHHhhhccccccCCcccccHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 788999999999999999999999999986421 1 3457899999999999999999999999987
|
| >d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.79 E-value=1.2e-19 Score=159.99 Aligned_cols=146 Identities=27% Similarity=0.360 Sum_probs=123.8
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCC-HHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhh
Q 010013 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLS-ESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVER 443 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~-~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~ 443 (520)
+.++..++.++.+.|.. .+++|.|+..||..++..++.... ...++.+|..+|.+++|.|+|.||+.++........
T Consensus 20 t~fs~~Ei~~l~~~F~~--~~~~G~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~D~~~~G~I~~~Ef~~~~~~~~~~~~ 97 (190)
T d1fpwa_ 20 TYFDRREIQQWHKGFLR--DCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTL 97 (190)
T ss_dssp CCSTHHHHHHHHHHHHH--HCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCS
T ss_pred cCCCHHHHHHHHHHHHH--HCCCCCccHHHHHHHHHHHCCCCChHHHHHHHHHHhCcCCCCcccHHHHHHHHHHHccCch
Confidence 35888999999888854 457899999999999988875444 455799999999999999999999998887766677
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCC------------C-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHcCC
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNM------------G-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGN 510 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~------------~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~~~ 510 (520)
.+.++.+|+.||.|++|.|+.+|+..++..... . .++.++.+|..+|.|+||.|+|+||.+.++. +
T Consensus 98 ~e~~~~~F~~~D~d~dG~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~dG~Is~~EF~~~~~~-~ 176 (190)
T d1fpwa_ 98 EEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKV-D 176 (190)
T ss_dssp THHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHHHHHS-S
T ss_pred HHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHHhcccccCCCchhhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH-C
Confidence 889999999999999999999999999976421 0 2466899999999999999999999999887 4
Q ss_pred CCC
Q 010013 511 PDM 513 (520)
Q Consensus 511 ~~~ 513 (520)
|+.
T Consensus 177 p~i 179 (190)
T d1fpwa_ 177 PSI 179 (190)
T ss_dssp TTH
T ss_pred HHH
Confidence 543
|
| >d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.79 E-value=1.9e-19 Score=158.37 Aligned_cols=142 Identities=23% Similarity=0.307 Sum_probs=120.8
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCH-HHHHHHHHHhcCCCCCceehhhhHHHhhccchhhh
Q 010013 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSE-SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVER 443 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~-~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~ 443 (520)
..++..++..|.+.|... +++|.|+..+|..++..++..... ..++.+|..+|.+++|.|+|+||+.++........
T Consensus 17 t~fs~~Ei~~l~~~F~~~--~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~d~~~dg~I~~~EF~~~l~~~~~~~~ 94 (187)
T d1g8ia_ 17 TYFTEKEVQQWYKGFIKD--CPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTL 94 (187)
T ss_dssp SSSCHHHHHHHHHHHHHH--CTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCH
T ss_pred cCCCHHHHHHHHHHHHHH--CCCCCcCHHHHHHHHHHhcCCCCHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHhccCch
Confidence 358889988888888654 578999999999999888766554 44688999999999999999999998887666667
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHhcC----C--------C-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYN----M--------G-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~----~--------~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.+.++.+|+.||.|++|+|+.+|+..++..+. . . .++.++.+|..+|.|+||.|+|+||++.+.+
T Consensus 95 ~e~l~~~F~~~D~d~dG~i~~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~dG~Is~~EF~~~~~~ 172 (187)
T d1g8ia_ 95 DEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKA 172 (187)
T ss_dssp HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHHHHHH
T ss_pred hhhHHHHHHHHhcCCCCeEcHHHHHHHHHHHhhhhcccccCchhhccHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 78899999999999999999999999886431 1 1 2456889999999999999999999999987
|
| >d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Recoverin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.79 E-value=1.4e-19 Score=161.29 Aligned_cols=142 Identities=20% Similarity=0.281 Sum_probs=120.0
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCC-CHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhh
Q 010013 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRL-SESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVER 443 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~ 443 (520)
..++..++..|.+.|. +.+++|.|+.+||..++..++... +...++.+|..+|.|++|.|+|.||+.++........
T Consensus 20 t~f~~~ei~~l~~~F~--~~~~~G~is~~EF~~~l~~~~~~~~~~~~~~~if~~~D~~~~G~I~f~EF~~~~~~~~~~~~ 97 (201)
T d1omra_ 20 TKFTEEELSSWYQSFL--KECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKT 97 (201)
T ss_dssp CSSCHHHHHHHHHHHH--HHCTTSEEEHHHHHHHHHHHCTTSCCHHHHHHHHHTTTSCSSSEEEHHHHHHHHHHHHSSCG
T ss_pred CCCCHHHHHHHHHHHH--HHCcCCCccHHHHHHHHHHhcCCCCHHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccch
Confidence 4588899988888884 456789999999999999987654 4556789999999999999999999998776655566
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC---------------CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG---------------DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~---------------~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.+.++.+|+.||.|++|.|+.+|+..++..+... .++.++.+|..+|.|+||.|+|+||++.+..
T Consensus 98 ~~~l~~~F~~~D~d~~G~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~~ 177 (201)
T d1omra_ 98 NQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGTLA 177 (201)
T ss_dssp GGSHHHHHHHHCTTCSSSBCHHHHHHHHHHHHTTSCHHHHTTSCGGGSSHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCCCCccCHHHHHHHHHHHHhhcChhhhhhhhhhhccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 7789999999999999999999999988764321 1345788999999999999999999998865
|
| >d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Kchip1, Kv4 potassium channel-interacting protein species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.78 E-value=6.8e-19 Score=153.57 Aligned_cols=142 Identities=23% Similarity=0.348 Sum_probs=118.9
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCC-CHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhh
Q 010013 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRL-SESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVER 443 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~ 443 (520)
..++..+++.+.+.|.. .+++|.|+.+||..++..++... ....++.+|..+|.|++|.|+|+||+.++........
T Consensus 8 t~ft~~ei~~l~~~F~~--~~~~G~is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~~~~g~I~~~EFl~~~~~~~~~~~ 85 (178)
T d1s6ca_ 8 TNFTKRELQVLYRGFKN--ECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTV 85 (178)
T ss_dssp SSCCHHHHHHHHHHHHH--HCTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCH
T ss_pred CCCCHHHHHHHHHHHHH--HCcCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHHhccch
Confidence 56788888888887754 45789999999999999887654 4555799999999999999999999998876666667
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHhc----CC--------C-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKY----NM--------G-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~----~~--------~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.+.++.+|+.||.|++|.|+.+|+..++..+ +. . .++.++.+|+.+|.|+||.|||+||.+.+.+
T Consensus 86 ~~~~~~~f~~~D~~~~g~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~DG~Is~~EF~~~i~~ 163 (178)
T d1s6ca_ 86 HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQE 163 (178)
T ss_dssp HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHHHHHTTS
T ss_pred HHHHHHHHHhhccCCCCeecHHHHHHHHHHHHhhcccccccCCcHHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 7889999999999999999999998877542 11 1 2455788999999999999999999998876
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.77 E-value=1.3e-18 Score=148.45 Aligned_cols=125 Identities=22% Similarity=0.346 Sum_probs=110.2
Q ss_pred HHHHhcccCCCCCCcccHHHHhhhhhhcCCCC-----CHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHH
Q 010013 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRL-----SESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYK 449 (520)
Q Consensus 375 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~-----~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~ 449 (520)
+..+|+.+ .+.+|.|+.+||+.+|..+|.+. +.+.++.++..+|.|++|.|+|+||+.++.. ...++.
T Consensus 2 ~~~~F~~~-a~~dG~I~~~EL~~~L~~~g~~~~~~~~s~~~~~~li~~~D~~~~G~i~~~EF~~l~~~------~~~~~~ 74 (165)
T d1k94a_ 2 VYTYFSAV-AGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAA------LNAWKE 74 (165)
T ss_dssp HHHHHHHH-HGGGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHH------HHHHHH
T ss_pred hHHHHHHh-cCCCCCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHhhc------cchhHH
Confidence 45677777 68899999999999999987654 5678999999999999999999999987643 356899
Q ss_pred HHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 450 AFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 450 ~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
+|+.||+|++|+|+.+||+.+++.+|.. ++++++.++..+|. ||.|+|+||+.+|.+
T Consensus 75 ~F~~fD~d~sG~I~~~El~~~l~~~G~~l~~~~~~~l~~~~d~--~g~i~~~eFi~~~~~ 132 (165)
T d1k94a_ 75 NFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSK--NGRIFFDDYVACCVK 132 (165)
T ss_dssp HHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHHCB--TTBCBHHHHHHHHHH
T ss_pred HHHHhCCCCCCeEcHHHHHHHHHHhhhcCCHHHHHHHHHHcCC--CCcCcHHHHHHHHHH
Confidence 9999999999999999999999999998 88999999999974 689999999987754
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Probab=99.77 E-value=3.1e-19 Score=155.88 Aligned_cols=135 Identities=25% Similarity=0.396 Sum_probs=99.3
Q ss_pred hhhHHHHh-hHHHHhcccCCCCCCcccHHHHhhhhhhcCCC--------CCHHHHHHHHHHhcCCCCCceehhhhHHHhh
Q 010013 366 NLSEEEIM-GLKEMFKSMDTDNSGTITFEELKAGLPKLGTR--------LSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (520)
Q Consensus 366 ~~~~~~~~-~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~--------~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 436 (520)
.++++++. +++++|..+| +++|.|+..||..+|..++.. .+.+.++.++..+|.|++|.|+|+||..++.
T Consensus 12 ~ls~~~~~~~~r~~F~~~d-~~dG~Is~~EL~~~L~~~~~~~~~~~~~~~s~e~~~~li~~~D~d~~G~i~~~EF~~l~~ 90 (188)
T d1qxpa2 12 VLSEEEIDDNFKTLFSKLA-GDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWN 90 (188)
T ss_dssp ---------------CCCC-CSSSSCCCSCTTTTTCC---------CCCCCHHHHHHHHHHHCC--CCCCCSSSHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHc-CCCCEECHHHHHHHHHHhCccccccccccCCHHHHHHHHHHhcCCCCCcccHHHHHHHHh
Confidence 35666654 5899999999 458999999999999876543 3567899999999999999999999998764
Q ss_pred ccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 437 HMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 437 ~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
. ...++.+|+.||+|++|.|+..||+.+|..+|.. +++.++.++.. +.|++|.|+|+||+.+|.+
T Consensus 91 ~------~~~~~~~F~~~D~d~sG~i~~~El~~~l~~~g~~~~~~~~~~l~~~-~~~~dg~i~f~eFi~~~~~ 156 (188)
T d1qxpa2 91 R------IRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVAR-FADDELIIDFDNFVRCLVR 156 (188)
T ss_dssp H------HHHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHH-TSCSSSBCCHHHHHHHHHH
T ss_pred h------hHHHHHHHHHhCCCCCCEECHHHHHHHHHHhhhcCCHHHHHHHHHH-hcCCCCcCCHHHHHHHHHH
Confidence 3 3468899999999999999999999999999987 66555555555 6799999999999998754
|
| >d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]
Probab=99.77 E-value=1.8e-18 Score=152.56 Aligned_cols=149 Identities=21% Similarity=0.327 Sum_probs=116.8
Q ss_pred hHHHHhhHHHHhcccCCCCCCcccHHHHhhhh-----hhcCCCCCHHHHH-----HHHHHhcCCCCCceehhhhHHHhhc
Q 010013 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGL-----PKLGTRLSESEVR-----QLMEAADVDGNGTIDYIEFITATMH 437 (520)
Q Consensus 368 ~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l-----~~~~~~~~~~~~~-----~~~~~~d~~~~g~i~~~ef~~~~~~ 437 (520)
+++++++++.+|+.+|.|++|.|+.+||..++ +.++...+..+.. ..+...+.+..+.|++++|+..+..
T Consensus 9 ~~~~i~r~k~~F~~~D~d~dG~I~~~E~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~e~~~~~~~ 88 (189)
T d1qv0a_ 9 NPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQ 88 (189)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhhccccCCCceehHHHHHHHHH
Confidence 56788999999999999999999999998654 4456666555543 3344456778899999999887653
Q ss_pred cch-----------hhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHH
Q 010013 438 MNR-----------VEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAM 505 (520)
Q Consensus 438 ~~~-----------~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~ 505 (520)
... ......+..+|+.+|.|++|+|+.+||+.++..+|.. ++++++.+|..+|.|+||.|+|+||+++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~is~~E~~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~ 168 (189)
T d1qv0a_ 89 LATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQ 168 (189)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHHHHHHH
T ss_pred HHHHhhhccccccHHHHHHHHHHHHHHHccCCCCcccchhhHHHHHhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHH
Confidence 211 1224467789999999999999999999999999987 8899999999999999999999999998
Q ss_pred HHc----CCCCCCCC
Q 010013 506 MRK----GNPDMVGN 516 (520)
Q Consensus 506 l~~----~~~~~~~~ 516 (520)
+.. .+|.++|+
T Consensus 169 ~~~~~~~~d~~~~g~ 183 (189)
T d1qv0a_ 169 HLGFWYTLDPEADGL 183 (189)
T ss_dssp HHHHHTTCCGGGTTT
T ss_pred HHHhCCCCCCCCCCc
Confidence 865 46677665
|
| >d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Sandworm (Nereis diversicolor) [TaxId: 126592]
Probab=99.76 E-value=2.2e-18 Score=149.75 Aligned_cols=149 Identities=19% Similarity=0.272 Sum_probs=116.1
Q ss_pred hHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcC----CCCCH-HH----HHHHHHH--hcCCCCCceehhhhHHHhh
Q 010013 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLG----TRLSE-SE----VRQLMEA--ADVDGNGTIDYIEFITATM 436 (520)
Q Consensus 368 ~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~----~~~~~-~~----~~~~~~~--~d~~~~g~i~~~ef~~~~~ 436 (520)
|+..+++|+.+|+.+|.|+||+|+.+||..++..++ ..... .. ....+.. .+.+++|.|+++||+..+.
T Consensus 1 s~~~~~~l~~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~ 80 (174)
T d2scpa_ 1 SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMK 80 (174)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCCCTTHHHHHHHHHHHHHHHTGGGTTTTSCEEHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHccCCCCcEeHHHHHHHHHHHhccccchhHHHHHhHHhhhhhccccccccCCCCcCcHHHHHHHHH
Confidence 356778999999999999999999999999887653 11111 11 2223333 2678899999999998765
Q ss_pred ccch-----hhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcceeHHHHHHHHHc---
Q 010013 437 HMNR-----VEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK--- 508 (520)
Q Consensus 437 ~~~~-----~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~--- 508 (520)
.... ......+..+|+.+|.|+||+||.+||..+++.++.. .+++..+|..+|.|+||.|+++||+.++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~-~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~f~~ 159 (174)
T d2scpa_ 81 EMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGLD-KTMAPASFDAIDTNNDGLLSLEEFVIAGSDFFM 159 (174)
T ss_dssp HHTSCGGGTHHHHTHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCC-GGGHHHHHHHHCTTCSSEECHHHHHHHHHHHHH
T ss_pred hhhcchhhHHHHHHHHHHHHHHHCCCccccCCHHHHHHHHHHHhhh-hHHHHHHHhhcCCCCCCcEeHHHHHHHHHHHhh
Confidence 4211 1234568899999999999999999999999988764 467899999999999999999999998876
Q ss_pred CCCCCCCCc
Q 010013 509 GNPDMVGNR 517 (520)
Q Consensus 509 ~~~~~~~~~ 517 (520)
.+++.|++.
T Consensus 160 ~~~~~~~~~ 168 (174)
T d2scpa_ 160 NDGDSTNKV 168 (174)
T ss_dssp CSSCCGGGG
T ss_pred cCCcccccc
Confidence 456667654
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Probab=99.76 E-value=3.7e-19 Score=156.22 Aligned_cols=134 Identities=21% Similarity=0.364 Sum_probs=114.6
Q ss_pred hhHHHHh-hHHHHhcccCCCCCCcccHHHHhhhhhhcCCC--------CCHHHHHHHHHHhcCCCCCceehhhhHHHhhc
Q 010013 367 LSEEEIM-GLKEMFKSMDTDNSGTITFEELKAGLPKLGTR--------LSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (520)
Q Consensus 367 ~~~~~~~-~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~--------~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 437 (520)
.+++++. .++++|..+| +++|.|+..||..+|..++.. .+.+.+..++..+|.|++|.|+|.||...+..
T Consensus 11 ~~~~~~~~~~r~~F~~~d-~~dG~Is~~EL~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d~~G~I~~~EF~~~~~~ 89 (186)
T d1df0a1 11 ANEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTK 89 (186)
T ss_dssp CCCSCSCHHHHHHHHHHH-GGGTCEEHHHHHHHHHHHHHC----CCCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHc-CCCCeEcHHHHHHHHHHhcccccccccccCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Confidence 3444554 4889999998 999999999999999876533 46778999999999999999999999887643
Q ss_pred cchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 438 MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 438 ~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
...++.+|+.+|+|++|+|+.+||+.+|+..|.. +. ++.+++..+|.|+||.|+|+||+.+|.+
T Consensus 90 ------~~~~~~~F~~~D~d~sG~I~~~El~~~l~~~g~~~~~-~~~~~~~~~d~d~dg~I~f~eFi~~~~~ 154 (186)
T d1df0a1 90 ------IQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPC-QLHQVIVARFADDELIIDFDNFVRCLVR 154 (186)
T ss_dssp ------HHHHHHHHHHHCTTCCSCEEGGGHHHHHHHTTEECCH-HHHHHHHHHHCCSTTEECHHHHHHHHHH
T ss_pred ------HHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhcccH-HHHHHHHHHHcCCCCeEeHHHHHHHHHH
Confidence 3568899999999999999999999999999888 54 4566777899999999999999998764
|
| >d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=99.75 E-value=7.7e-19 Score=154.36 Aligned_cols=141 Identities=14% Similarity=0.278 Sum_probs=115.1
Q ss_pred hhHHHHhhHHHHhcc-cCCCCCCcccHHHHhhhhhhcCC----CCCH-----------HHHHHHHHHhcCCCCCceehhh
Q 010013 367 LSEEEIMGLKEMFKS-MDTDNSGTITFEELKAGLPKLGT----RLSE-----------SEVRQLMEAADVDGNGTIDYIE 430 (520)
Q Consensus 367 ~~~~~~~~l~~~F~~-~D~~~~g~i~~~e~~~~l~~~~~----~~~~-----------~~~~~~~~~~d~~~~g~i~~~e 430 (520)
+|+.+.+++.++|+. +|.|+||.|+.+||..++..++. .... ..+..++...|.+++|.|++++
T Consensus 2 lt~~q~~~i~~~F~~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~i~~~~ 81 (185)
T d2sasa_ 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEE 81 (185)
T ss_dssp CCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHH
T ss_pred cCHHHHHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHhccccCCCcccHHHHHHHHHHHHHHHHHHHHhCcCCCCcEeeeH
Confidence 677888999999997 59999999999999999876531 1111 1235567778999999999999
Q ss_pred hHHHhhcc---------chhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcceeHHH
Q 010013 431 FITATMHM---------NRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEE 501 (520)
Q Consensus 431 f~~~~~~~---------~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i~~~e 501 (520)
|...+... ........+..+|+.+|.|++|+|+.+||+.++..+|.. .++++.+|..+|.|+||.|+|+|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~l~-~~~~~~~f~~~D~d~dG~i~~~E 160 (185)
T d2sasa_ 82 YLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQLQ-CADVPAVYNVITDGGKVTFDLNR 160 (185)
T ss_dssp HHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCCC-CSSHHHHHHHHHTTTTSCCSHHH
T ss_pred hhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHccCCCccCCHHHHHHHHHHcCCC-HHHHHHHHHHcCCCCCCCCcHHH
Confidence 99876431 112235568899999999999999999999999988764 45799999999999999999999
Q ss_pred HHHHHHc
Q 010013 502 FAAMMRK 508 (520)
Q Consensus 502 f~~~l~~ 508 (520)
|+.++.+
T Consensus 161 F~~~~~~ 167 (185)
T d2sasa_ 161 YKELYYR 167 (185)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9988764
|
| >d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain small (regulatory) subunit (domain VI) species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.75 E-value=1.7e-18 Score=150.15 Aligned_cols=131 Identities=21% Similarity=0.350 Sum_probs=112.3
Q ss_pred HHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCC--------CCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchh
Q 010013 370 EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTR--------LSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRV 441 (520)
Q Consensus 370 ~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~--------~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~ 441 (520)
+++++++++|..+|. .||.|+..||..+|..++.. .+.+.++.++..+|.|++|.|+|+||+.++..
T Consensus 1 ee~~~~r~~F~~~d~-~dg~I~~~EL~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~d~d~~g~i~~~ef~~~~~~---- 75 (173)
T d1alva_ 1 EEVRQFRRLFAQLAG-DDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNN---- 75 (173)
T ss_dssp CHHHHHHHHHHHHHG-GGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH----
T ss_pred ChHHHHHHHHHHHcC-CCCcCCHHHHHHHHHHhCCCcchhhhccCCHHHHHHHHHHhccCCCCcccchhhhhhhhh----
Confidence 467899999999995 58999999999999887543 45678999999999999999999999887643
Q ss_pred hhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 442 ~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
...+..+|+.||.|++|.|+..||+.+|+..|.. +++.++ .|..+|.|++|.|+|+||+.+|.+
T Consensus 76 --~~~~~~~f~~~D~d~~G~I~~~el~~~L~~~g~~~~~~~~~-~~~~~d~d~~G~i~~~EF~~~~~~ 140 (173)
T d1alva_ 76 --IKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYS-MIIRRYSDEGGNMDFDNFISCLVR 140 (173)
T ss_dssp --HHHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHH-HHHHHHTCSSSCBCHHHHHHHHHH
T ss_pred --hhHHHHHHHHhccCCCCeecHHHHHHHHHHHHHhhHHHHHH-HhhccccCCCCeEeHHHHHHHHHH
Confidence 3467889999999999999999999999999988 655555 555667799999999999998854
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Probab=99.74 E-value=1.3e-18 Score=166.96 Aligned_cols=142 Identities=25% Similarity=0.414 Sum_probs=121.7
Q ss_pred hhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccc------
Q 010013 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN------ 439 (520)
Q Consensus 366 ~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~------ 439 (520)
.++.++...+.++|..+|.|++|.|+.+||..+|..++..++.+++..+|..+|.|++|.|+|.||+..+....
T Consensus 115 ~l~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~F 194 (321)
T d1ij5a_ 115 MLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDLAALVADF 194 (321)
T ss_dssp CCCHHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHHHHHTTSCSSHHHHHHHHHHHCCSSTHHHHHHTTSHHHHHTSCCCH
T ss_pred cCCHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHcCCcccHHHHHHHHHHHhhcCCccccchhhhhhhhhhhhhhHHH
Confidence 46778888999999999999999999999999999999999999999999999999999999999975432100
Q ss_pred -----------------------------------------------------hhhhHHHHHHHHhhhcCCCCCceeHHH
Q 010013 440 -----------------------------------------------------RVEREEHLYKAFEYFDKDNSGYITMEE 466 (520)
Q Consensus 440 -----------------------------------------------------~~~~~~~~~~~F~~~D~d~dG~I~~~E 466 (520)
.......+..+|..+|.|++|+|+.+|
T Consensus 195 ~~~d~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~F~~~D~d~~G~Is~~E 274 (321)
T d1ij5a_ 195 RKIDTNSNGTLSRKEFREHFVRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADFDKSGQLSKEE 274 (321)
T ss_dssp HHHCTTCCSEECHHHHHHHHHHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHHHHHTCSSSCSSEEHHH
T ss_pred HHHhhcccccchhHHHhhhhhcccccchHHHHHHHHhhhcccccccccccccchhhhhhHHHHHHHHHhcCCCCCCcHHH
Confidence 000012244579999999999999999
Q ss_pred HHHHHHhcCCC--CHHHHHHHHHHhcCCCCcceeHHHHHHHHH
Q 010013 467 LEHALKKYNMG--DAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507 (520)
Q Consensus 467 l~~~l~~~~~~--~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~ 507 (520)
|+.++..++.. +.+++..+|..+|.|+||.|+|+||+++|-
T Consensus 275 ~~~~l~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~ml 317 (321)
T d1ij5a_ 275 VQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLVL 317 (321)
T ss_dssp HHHHHHHTTCCGGGCSTHHHHHHHHTTTTCSEECHHHHHHHHH
T ss_pred HHHHHHHcCCCcCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 99999999874 567899999999999999999999999874
|
| >d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium- and integrin-binding protein, CIB species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.74 E-value=3.8e-18 Score=148.43 Aligned_cols=143 Identities=21% Similarity=0.360 Sum_probs=112.8
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCc--------ccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCC-CCCceehhhhHHHh
Q 010013 365 ENLSEEEIMGLKEMFKSMDTDNSGT--------ITFEELKAGLPKLGTRLSESEVRQLMEAADVD-GNGTIDYIEFITAT 435 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D~~~~g~--------i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~-~~g~i~~~ef~~~~ 435 (520)
+.|+++++.++.+.|..++.+++|. ++.++|.... .+..++ ..+++|..+|.+ ++|.|+|+||+.++
T Consensus 9 T~ft~~EI~~l~~~F~~l~~~~~~~~~~~~~~~i~~~e~~~~~-~l~~~~---~~~rif~~fd~~~~~g~I~f~EFv~~l 84 (180)
T d1xo5a_ 9 TFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLP-ELKANP---FKERICRVFSTSPAKDSLSFEDFLDLL 84 (180)
T ss_dssp CCSCHHHHHHHHHHHHTTSCGGGCSHHHHHHCCEEHHHHHTSH-HHHTCT---THHHHHHHHCCSTTCCEECHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHCcCccccccccccceEcHHHHhcCc-ccccCh---HHHHHHHhccCCCCCCcCcHHHHHHHH
Confidence 4688999999999999998887765 5566665432 232222 357899999987 68999999999988
Q ss_pred hccc-hhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcC-----CC-C----HHHHHHHHHHhcCCCCcceeHHHHHH
Q 010013 436 MHMN-RVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYN-----MG-D----AKTIKEIIAEVDIDNDGRINYEEFAA 504 (520)
Q Consensus 436 ~~~~-~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~-----~~-~----~~~~~~~~~~~d~~~dg~i~~~ef~~ 504 (520)
.... .....+.++.+|+.||.|++|+|+.+|+..+++.+. .. + ++.+..+|+.+|.|+||+|+|+||.+
T Consensus 85 ~~~~~~~~~~~kl~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~dG~Is~~EF~~ 164 (180)
T d1xo5a_ 85 SVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQH 164 (180)
T ss_dssp HHHSTTSCHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHC------CCCCTTHHHHHHHHHHHHCTTCSSSBCHHHHHH
T ss_pred HHHhhcCCHHHHHHHhhccccCCCCCeeeHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence 7653 445678899999999999999999999999998652 11 2 23367789999999999999999999
Q ss_pred HHHcCCCC
Q 010013 505 MMRKGNPD 512 (520)
Q Consensus 505 ~l~~~~~~ 512 (520)
++.+ +|+
T Consensus 165 ~~~~-~P~ 171 (180)
T d1xo5a_ 165 VISR-SPD 171 (180)
T ss_dssp HHHH-CHH
T ss_pred HHHh-CHH
Confidence 9986 444
|
| >d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Sorcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.73 E-value=7.5e-18 Score=145.78 Aligned_cols=132 Identities=23% Similarity=0.343 Sum_probs=113.2
Q ss_pred hHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCC-----CHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhh
Q 010013 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRL-----SESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVE 442 (520)
Q Consensus 368 ~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~-----~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~ 442 (520)
+.++...++..|..++ ++||.|+..||..+|..+|.+. +.++++.++..+|.|++|.|+|.||+.++..
T Consensus 2 p~~~~~~~~~~F~~~~-~~dG~Is~~EL~~~L~~~g~~~~~~~~~~~~v~~l~~~~D~d~~G~I~f~EF~~~~~~----- 75 (172)
T d1juoa_ 2 PGQTQDPLYGYFAAVA-GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAV----- 75 (172)
T ss_dssp TTCCCCTTHHHHHHHH-TTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH-----
T ss_pred CcchHHHHHHHHHHhC-CCCCCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHHCCCCCCceehHHHHHHHHh-----
Confidence 3455567899999996 8899999999999999987653 5788999999999999999999999987643
Q ss_pred hHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 443 REEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 443 ~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
...+..+|+.+|.|++|+|+.+|+..+|..++.. ++++++.+++.+| .+|.|+|+||+.+|.+
T Consensus 76 -~~~~~~~f~~~D~d~sG~i~~~El~~~l~~~g~~ls~~~~~~l~~~~d--~~g~i~~~eF~~~~~~ 139 (172)
T d1juoa_ 76 -LNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYS--TNGKITFDDYIACCVK 139 (172)
T ss_dssp -HHHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHTC--SSSSEEHHHHHHHHHH
T ss_pred -hhhhhHHHHHhCcCCCCcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHH--hcCCcCHHHHHHHHHH
Confidence 2457789999999999999999999999999988 8888988888885 4578888888887753
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Probab=99.73 E-value=1.2e-17 Score=131.09 Aligned_cols=100 Identities=31% Similarity=0.501 Sum_probs=86.4
Q ss_pred CCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhc---CCC-CHH
Q 010013 405 RLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY---NMG-DAK 480 (520)
Q Consensus 405 ~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~---~~~-~~~ 480 (520)
-++.++|.+++..++. +|.|+|.||+.++... ..+.+.++.+|+.||+|++|+|+.+||+.+|+.+ |.. +++
T Consensus 5 ~l~~~di~~~~~~~~~--~G~idf~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~~~~~ 80 (109)
T d5pala_ 5 VLKADDINKAISAFKD--PGTFDYKRFFHLVGLK--GKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDT 80 (109)
T ss_dssp TSCHHHHHHHHHHTCS--TTCCCHHHHHHHHTCT--TCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCCHH
T ss_pred HccHHHHHHHHHhcCC--CCcCcHHHHHHHHHhc--CCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHhhhccCcCCHH
Confidence 3567889999998764 5789999999877532 3456789999999999999999999999999876 455 888
Q ss_pred HHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 481 TIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 481 ~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
+++++|+.+|.|+||.|+|+||+++|++
T Consensus 81 e~~~~~~~~D~d~dG~I~~~EF~~~m~~ 108 (109)
T d5pala_ 81 ETKALLAAGDSDHDGKIGADEFAKMVAQ 108 (109)
T ss_dssp HHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence 9999999999999999999999999975
|
| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
Probab=99.72 E-value=1.2e-17 Score=146.86 Aligned_cols=141 Identities=20% Similarity=0.256 Sum_probs=113.0
Q ss_pred hHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhh-----cCCCCCHHHHHHHH-----HHhcCCCCCceehhhhHHHhhc
Q 010013 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPK-----LGTRLSESEVRQLM-----EAADVDGNGTIDYIEFITATMH 437 (520)
Q Consensus 368 ~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~-----~~~~~~~~~~~~~~-----~~~d~~~~g~i~~~ef~~~~~~ 437 (520)
++.++++++++|+.+|.|++|+|+.+||..++.. ++..++..++...+ .......++.+++.+|+..+..
T Consensus 7 ~p~~~~~~k~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (187)
T d1uhka1 7 NPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKK 86 (187)
T ss_dssp CHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHhccCccHHHHHHHHHHhhhhcccccccccccHHHHHHHHHH
Confidence 4567889999999999999999999999876543 55555555443333 3344566778999999876543
Q ss_pred cchh-----------hhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHH
Q 010013 438 MNRV-----------EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAM 505 (520)
Q Consensus 438 ~~~~-----------~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~ 505 (520)
.... .....+..+|+.+|+|++|+|+.+||+.++..+|.. ++++++.+|..+|.|+||.|+|+||+++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~ 166 (187)
T d1uhka1 87 LATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQ 166 (187)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHHHH
T ss_pred HHHHHHHhhhhhhHHHHHHHHHHHHHHHccCCCcccchHHHHHHHHHhCCCccHHHHHHHHHHhCCCCCCCEeHHHHHHH
Confidence 2111 123458889999999999999999999999999987 8899999999999999999999999998
Q ss_pred HHc
Q 010013 506 MRK 508 (520)
Q Consensus 506 l~~ 508 (520)
+..
T Consensus 167 ~~~ 169 (187)
T d1uhka1 167 HLG 169 (187)
T ss_dssp HHH
T ss_pred HHH
Confidence 754
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=99.71 E-value=1.9e-17 Score=130.07 Aligned_cols=99 Identities=24% Similarity=0.473 Sum_probs=85.3
Q ss_pred CCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhc---CCC-CHHH
Q 010013 406 LSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY---NMG-DAKT 481 (520)
Q Consensus 406 ~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~---~~~-~~~~ 481 (520)
++.++|.+++..+| ++|.|+|.||+.++... ....+.++.+|+.||.|++|+|+.+||+.+++.+ |.. ++++
T Consensus 6 l~~eeI~~~~~~~d--~dG~idf~EF~~~~~~~--~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~ls~~e 81 (109)
T d1pvaa_ 6 LKADDIKKALDAVK--AEGSFNHKKFFALVGLK--AMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAE 81 (109)
T ss_dssp SCHHHHHHHHHHTC--STTCCCHHHHHHHHTCT--TSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCCHHH
T ss_pred CCHHHHHHHHHhcC--CCCCCcHHHHHHHHHHc--cCCHHHHHHHhhCccCCCcCeEcHHHHHHHHHHhhhcCCCCCHHH
Confidence 46788999988775 46789999999887543 2345678999999999999999999999999877 444 7899
Q ss_pred HHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 482 IKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 482 ~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
++++|+.+|.|+||.|+|+||+++|.+
T Consensus 82 v~~~~~~~D~d~dG~I~~~EF~~~m~~ 108 (109)
T d1pvaa_ 82 TKAFLKAADKDGDGKIGIDEFETLVHE 108 (109)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred HHHHHHHHCCCCcCcEeHHHHHHHHHh
Confidence 999999999999999999999999975
|
| >d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calerythrin species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.69 E-value=1.5e-16 Score=138.25 Aligned_cols=136 Identities=20% Similarity=0.302 Sum_probs=111.4
Q ss_pred HhhHHHHhcccCCCCCCcccHHHHhhhhhhcC----CCCCHHH-----------HHHHHHHhcCCCCCceehhhhHHHhh
Q 010013 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKLG----TRLSESE-----------VRQLMEAADVDGNGTIDYIEFITATM 436 (520)
Q Consensus 372 ~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~----~~~~~~~-----------~~~~~~~~d~~~~g~i~~~ef~~~~~ 436 (520)
.++|+++|+.+|.|++|.|+.+||..++..+. ......+ +..++...|.+++|.|++.++...+.
T Consensus 6 ~~~l~~~F~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 85 (176)
T d1nyaa_ 6 SDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVTE 85 (176)
T ss_dssp HHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHHh
Confidence 45689999999999999999999999987643 2332222 35566677899999999999988654
Q ss_pred cc--------chhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 437 HM--------NRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 437 ~~--------~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.. ........++.+|..+|.|++|+|+.+||++++..++. ++++++.+|..+|.|+||.|+|+||+.+++.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~~~~~~~-~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~~~ 164 (176)
T d1nyaa_ 86 NLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALGM-SKAEAAEAFNQVDTNGNGELSLDELLTAVRD 164 (176)
T ss_dssp HHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTTC-CHHHHHHHHHHHCTTCSSEEEHHHHHHHHSC
T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHccCCChhhhHHHHHHHHHhcCC-cHHHHHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence 32 11223456889999999999999999999999998875 5678999999999999999999999999976
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=99.65 E-value=3.7e-16 Score=122.21 Aligned_cols=99 Identities=28% Similarity=0.446 Sum_probs=86.4
Q ss_pred CCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCC---C-CHH
Q 010013 405 RLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNM---G-DAK 480 (520)
Q Consensus 405 ~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~---~-~~~ 480 (520)
.++.++|..++..++.+ |.|+|.||+..+... ....++++.+|+.||.|++|+|+.+||+.+++.++. . +++
T Consensus 4 gls~~di~~~~~~~~~~--gsi~~~eF~~~~~l~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l~~~~~~~~~~ 79 (107)
T d2pvba_ 4 GLKDADVAAALAACSAA--DSFKHKEFFAKVGLA--SKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDA 79 (107)
T ss_dssp TSCHHHHHHHHHHTCST--TCCCHHHHHHHHTGG--GSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHH
T ss_pred CCCHHHHHHHHHhccCC--CCcCHHHHHHHHhcc--cCCHHHHHHHHHhhccCCCCcCcHHHHHHHHHHhhcccccCCHH
Confidence 46788999999998764 569999999877532 345678999999999999999999999999998753 3 888
Q ss_pred HHHHHHHHhcCCCCcceeHHHHHHHHH
Q 010013 481 TIKEIIAEVDIDNDGRINYEEFAAMMR 507 (520)
Q Consensus 481 ~~~~~~~~~d~~~dg~i~~~ef~~~l~ 507 (520)
+++++|+.+|.|+||+|+|+||+.+|+
T Consensus 80 ~~~~l~~~~D~d~dG~I~~~EF~~~m~ 106 (107)
T d2pvba_ 80 ETKAFLADGDKDGDGMIGVDEFAAMIK 106 (107)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 999999999999999999999999986
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Probab=99.64 E-value=4.7e-16 Score=122.38 Aligned_cols=100 Identities=29% Similarity=0.470 Sum_probs=85.9
Q ss_pred CCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCC---C-CHH
Q 010013 405 RLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNM---G-DAK 480 (520)
Q Consensus 405 ~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~---~-~~~ 480 (520)
-++.+++..++..++. +|.|+|+||+.++... ....+.++.+|+.||+|++|+|+.+||+.+++.++. . +++
T Consensus 5 ~~~~~~i~~~~~~~~~--~~~i~f~eF~~~~~~~--~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~~~~~ 80 (109)
T d1rwya_ 5 LLSAEDIKKAIGAFTA--ADSFDHKKFFQMVGLK--KKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAK 80 (109)
T ss_dssp HSCHHHHHHHHHTTCS--TTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHH
T ss_pred hcCHHHHHHHHHhccc--CCCcCHHHHHHHHccc--cCCHHHHHHHhhcccCCCCCcCcHHHHHHHHHHhccccccCCHH
Confidence 3567889999988755 5789999999887543 235668999999999999999999999999998753 3 788
Q ss_pred HHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 481 TIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 481 ~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
+++.+|+.+|.|+||+|+|+||+++|++
T Consensus 81 e~~~~~~~~D~d~dG~i~~~EF~~~m~~ 108 (109)
T d1rwya_ 81 ETKTLMAAGDKDGDGKIGVEEFSTLVAE 108 (109)
T ss_dssp HHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred HHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence 9999999999999999999999999975
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.59 E-value=2.3e-15 Score=117.92 Aligned_cols=102 Identities=23% Similarity=0.408 Sum_probs=86.1
Q ss_pred cCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCC---C-
Q 010013 402 LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNM---G- 477 (520)
Q Consensus 402 ~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~---~- 477 (520)
++..++.++|..++..++. +|.++|++|+..+... ....+.++.+|+.||+|++|+|+.+||+.+++.++. .
T Consensus 2 ~~d~ls~~dI~~~l~~~~~--~~s~~~~~F~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~l 77 (108)
T d1rroa_ 2 ITDILSAEDIAAALQECQD--PDTFEPQKFFQTSGLS--KMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDAREL 77 (108)
T ss_dssp GGGTSCHHHHHHHHHHTCS--TTCCCHHHHHHHHSGG--GSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCC
T ss_pred hhhhCCHHHHHHHHHhccc--CCCccHHHHHHHHccC--cCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHHHhccCCC
Confidence 3455788899999887754 5679999998765432 345668999999999999999999999999988743 3
Q ss_pred CHHHHHHHHHHhcCCCCcceeHHHHHHHHH
Q 010013 478 DAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507 (520)
Q Consensus 478 ~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~ 507 (520)
++++++++|..+|.|+||.|+|+||+.+|+
T Consensus 78 ~~~~~~~~~~~~D~d~dG~I~~~EF~~~m~ 107 (108)
T d1rroa_ 78 TESETKSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp CHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred CHHHHHHHHHHhCCCCCCeEeHHHHHHHHc
Confidence 788999999999999999999999999986
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.56 E-value=1.1e-14 Score=123.70 Aligned_cols=121 Identities=20% Similarity=0.297 Sum_probs=105.4
Q ss_pred hHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhh
Q 010013 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEY 453 (520)
Q Consensus 374 ~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~ 453 (520)
.++.+++.+|.|++|.|+.+||..++..+ .+++.+|..+|.|++|.|+.+||..++...+...+...+..+++.
T Consensus 41 ~~~~li~~~D~~~~G~i~~~EF~~l~~~~------~~~~~~F~~fD~d~sG~I~~~El~~~l~~~G~~l~~~~~~~l~~~ 114 (165)
T d1k94a_ 41 TCRIMIAMLDRDHTGKMGFNAFKELWAAL------NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKR 114 (165)
T ss_dssp HHHHHHHHHCTTCSSCBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHhhcc------chhHHHHHHhCCCCCCeEcHHHHHHHHHHhhhcCCHHHHHHHHHH
Confidence 35677778899999999999999887653 578999999999999999999999999887777778899999999
Q ss_pred hcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcce--eHHHHHHHHH
Q 010013 454 FDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRI--NYEEFAAMMR 507 (520)
Q Consensus 454 ~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i--~~~ef~~~l~ 507 (520)
+|. +|.|+.+||..++..+ +.+.++|+.+|.+++|.| +++||+.++-
T Consensus 115 ~d~--~g~i~~~eFi~~~~~l-----~~~~~~F~~~D~d~~G~i~l~~~ef~~~~~ 163 (165)
T d1k94a_ 115 YSK--NGRIFFDDYVACCVKL-----RALTDFFRKRDHLQQGSANFIYDDFLQGTM 163 (165)
T ss_dssp HCB--TTBCBHHHHHHHHHHH-----HHHHHHHHTTCTTCCSEEEEEHHHHHHHHH
T ss_pred cCC--CCcCcHHHHHHHHHHH-----HHHHHHHHHhCCCCCCcEEecHHHHHHHHH
Confidence 975 5899999999888754 567889999999999987 7899998763
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Probab=99.53 E-value=3.2e-14 Score=124.16 Aligned_cols=122 Identities=20% Similarity=0.254 Sum_probs=104.0
Q ss_pred hhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHh
Q 010013 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452 (520)
Q Consensus 373 ~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~ 452 (520)
..+..+++.+|.|++|.|+..||..+...+ ..+..+|..+|.|++|.|+.+|+..++.......+.+ +..+|.
T Consensus 61 ~~~~~l~~~~D~d~~G~I~~~EF~~~~~~~------~~~~~~F~~~D~d~sG~I~~~El~~~l~~~g~~~~~~-~~~~~~ 133 (186)
T d1df0a1 61 ETCKIMVDMLDEDGSGKLGLKEFYILWTKI------QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQ-LHQVIV 133 (186)
T ss_dssp HHHHHHHHHHCCSSSSEECHHHHHHHHHHH------HHHHHHHHHHCTTCCSCEEGGGHHHHHHHTTEECCHH-HHHHHH
T ss_pred HHHHHHHHHHcCCCCCcccHHHHHHHHHhH------HHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhcccHH-HHHHHH
Confidence 346788889999999999999999887653 5789999999999999999999999987665544444 556777
Q ss_pred hhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcce--eHHHHHHHH
Q 010013 453 YFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRI--NYEEFAAMM 506 (520)
Q Consensus 453 ~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i--~~~ef~~~l 506 (520)
.+|.|++|.|+++||..++..+ +.+..+|+.+|.|++|.| +|+||+.+.
T Consensus 134 ~~d~d~dg~I~f~eFi~~~~~l-----~~~~~~F~~~D~~~~G~i~l~~~ef~~~~ 184 (186)
T d1df0a1 134 ARFADDELIIDFDNFVRCLVRL-----EILFKIFKQLDPENTGTIQLDLISWLSFS 184 (186)
T ss_dssp HHHCCSTTEECHHHHHHHHHHH-----HHHHHHHHHHCTTCCSEEEEEHHHHHHHH
T ss_pred HHHcCCCCeEeHHHHHHHHHHH-----HHHHHHHHHhCCCCCCcEEecHHHHHHHh
Confidence 8999999999999999988654 578899999999999987 899999864
|
| >d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Apoptosis-linked protein alg-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.52 E-value=3.9e-14 Score=123.00 Aligned_cols=123 Identities=20% Similarity=0.370 Sum_probs=107.2
Q ss_pred hhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHh
Q 010013 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452 (520)
Q Consensus 373 ~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~ 452 (520)
..+..+|+.+|.+++|.|+.+||..++... ..++.+|+.+|.+++|.|+.+||..++.......+.+.+..+++
T Consensus 56 ~~~~~l~~~~D~d~~g~i~~~EFl~~~~~~------~~~~~~f~~~D~~~~G~i~~~el~~~l~~~~~~l~~e~~~~~~~ 129 (181)
T d1hqva_ 56 VTVRSIISMFDRENKAGVNFSEFTGVWKYI------TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIR 129 (181)
T ss_dssp HHHHHHHHHHCCSSSSSBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSSBCHHHHHHHHHHHTBCCCHHHHHHHHH
T ss_pred HHHHHHhhccccccccchhhhHHHhhhhhc------cccccccccccccccchhhhHHHHHHHHHcCCcchhHHHHHHHH
Confidence 345677888999999999999999987653 46788999999999999999999998887666677888999999
Q ss_pred hhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcce--eHHHHHHHH
Q 010013 453 YFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRI--NYEEFAAMM 506 (520)
Q Consensus 453 ~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i--~~~ef~~~l 506 (520)
.+|.+++|+|+++||..++..+ +.+.++|+.+|+++||.| +++||+.+|
T Consensus 130 ~~d~~~dg~Is~~eF~~~~~~l-----~~l~~~F~~~D~~~dG~i~~~~~ef~~~~ 180 (181)
T d1hqva_ 130 KFDRQGRGQIAFDDFIQGCIVL-----QRLTDIFRRYDTDQDGWIQVSYEQYLSMV 180 (181)
T ss_dssp HHCSSCSSCBCHHHHHHHHHHH-----HHHHHHHHHHCTTCSSCCCCCHHHHHHHH
T ss_pred HhCCCCCCcCcHHHHHHHHHHH-----HHHHHHHHHhCCCCCCCEEecHHHHHHHh
Confidence 9999999999999999888644 468889999999999965 799999876
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.50 E-value=3.1e-14 Score=103.39 Aligned_cols=68 Identities=35% Similarity=0.635 Sum_probs=64.0
Q ss_pred hhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 441 VEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 441 ~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..++++++.+|+.||+|++|+|+..||+.+|..+|.. ++++++++|..+|.|++|.|+|+||+++|+.
T Consensus 5 ~~~eeel~~~F~~fD~~~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~D~d~dg~I~~~EF~~~m~~ 73 (75)
T d1jc2a_ 5 GKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 73 (75)
T ss_dssp CCCHHHHHHHHHHHCCSTTSSEEHHHHHHHHHHSSSCCCHHHHHHHHHHHCSSSCSEECHHHHHHHHHT
T ss_pred CCcHHHHHHHHHHHcCCCcCeEcHHHHHHHHHhcCCCccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 3457789999999999999999999999999999998 8999999999999999999999999999974
|
| >d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Sorcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.49 E-value=9.6e-14 Score=119.45 Aligned_cols=122 Identities=23% Similarity=0.309 Sum_probs=105.8
Q ss_pred hhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHh
Q 010013 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452 (520)
Q Consensus 373 ~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~ 452 (520)
..+..+++.+|.|++|.|+..||..++... ..+...|+.+|.+++|.|+.+|+..++.......+.+.+..+|+
T Consensus 47 ~~v~~l~~~~D~d~~G~I~f~EF~~~~~~~------~~~~~~f~~~D~d~sG~i~~~El~~~l~~~g~~ls~~~~~~l~~ 120 (172)
T d1juoa_ 47 ETCRLMVSMLDRDMSGTMGFNEFKELWAVL------NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAK 120 (172)
T ss_dssp HHHHHHHHHHCTTCSSCEEHHHHHHHHHHH------HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCceehHHHHHHHHhh------hhhhHHHHHhCcCCCCcCCHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 345677889999999999999999887643 45788999999999999999999999887776777888999999
Q ss_pred hhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcce--eHHHHHHHHH
Q 010013 453 YFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRI--NYEEFAAMMR 507 (520)
Q Consensus 453 ~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i--~~~ef~~~l~ 507 (520)
.+|. +|.|+.+||..++..+ +.+.++|+.+|.|++|.| +|+||+.++-
T Consensus 121 ~~d~--~g~i~~~eF~~~~~~~-----~~~~~~f~~~D~d~~G~Itl~~~eFl~~~l 170 (172)
T d1juoa_ 121 RYST--NGKITFDDYIACCVKL-----RALTDSFRRRDTAQQGVVNFPYDDFIQCVM 170 (172)
T ss_dssp HTCS--SSSEEHHHHHHHHHHH-----HHHHHHHHHTCTTCCSEEEEEHHHHHHHHT
T ss_pred HHHh--cCCcCHHHHHHHHHHH-----HHHHHHHHHhCCCCCCcEEecHHHHHHHHH
Confidence 9975 6889999999998765 468899999999999987 8899998764
|
| >d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain small (regulatory) subunit (domain VI) species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.49 E-value=1.2e-13 Score=118.93 Aligned_cols=122 Identities=22% Similarity=0.286 Sum_probs=101.9
Q ss_pred hhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHh
Q 010013 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452 (520)
Q Consensus 373 ~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~ 452 (520)
..+..++..+|.|++|.|+.+||..++..+ ..+..+|+.+|.|++|.|+..||..++.......+.+.+. +|.
T Consensus 47 ~~~~~l~~~~d~d~~g~i~~~ef~~~~~~~------~~~~~~f~~~D~d~~G~I~~~el~~~L~~~g~~~~~~~~~-~~~ 119 (173)
T d1alva_ 47 DTCRSMVAVMDSDTTGKLGFEEFKYLWNNI------KKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYS-MII 119 (173)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHH-HHH
T ss_pred HHHHHHHHHhccCCCCcccchhhhhhhhhh------hHHHHHHHHhccCCCCeecHHHHHHHHHHHHHhhHHHHHH-Hhh
Confidence 346678899999999999999999887653 4578899999999999999999999887665555555444 555
Q ss_pred hhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcce--eHHHHHHHH
Q 010013 453 YFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRI--NYEEFAAMM 506 (520)
Q Consensus 453 ~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i--~~~ef~~~l 506 (520)
.+|.|++|.|+.+||..++..+ +.+..+|+.+|.|++|.| +|+||+.+.
T Consensus 120 ~~d~d~~G~i~~~EF~~~~~~~-----~~~~~~f~~~D~d~~G~it~~~~efl~~~ 170 (173)
T d1alva_ 120 RRYSDEGGNMDFDNFISCLVRL-----DAMFRAFKSLDKDGTGQIQVNIQEWLQLT 170 (173)
T ss_dssp HHHTCSSSCBCHHHHHHHHHHH-----HHHHHHHHHHSSSCCSEEEEEHHHHHHHH
T ss_pred ccccCCCCeEeHHHHHHHHHHH-----HHHHHHHHHhCCCCCCcEEecHHHHHHHH
Confidence 6777999999999999988654 568889999999999988 689999875
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.48 E-value=2.5e-14 Score=100.85 Aligned_cols=63 Identities=46% Similarity=0.821 Sum_probs=59.9
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHH
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMM 506 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l 506 (520)
+++++.+|+.||+|++|+|+.+||+.++..+|.. ++.+++.+++.+|.|+||.|+|+||+++|
T Consensus 2 eeel~~aF~~fD~d~~G~I~~~el~~~l~~lg~~~~~~e~~~l~~~~D~d~~g~I~~~eF~~~m 65 (65)
T d1fw4a_ 2 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 65 (65)
T ss_dssp CHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCSSSEEHHHHHHHC
T ss_pred HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHC
Confidence 3679999999999999999999999999999998 89999999999999999999999999875
|
| >d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Programmed cell death 6 protein-like protein species: Leishmania major [TaxId: 5664]
Probab=99.48 E-value=1.3e-13 Score=119.74 Aligned_cols=126 Identities=19% Similarity=0.297 Sum_probs=106.5
Q ss_pred hhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHH
Q 010013 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREE 445 (520)
Q Consensus 366 ~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~ 445 (520)
.++..+ +.++|..+|.|++|.|+.+||...+.. ...+...|..+|.+++|.|+.+||..++.......+.+
T Consensus 50 ~~s~~~---~~~l~~~~d~d~~~~i~~~ef~~~~~~------~~~~~~~F~~~D~~~~g~I~~~el~~~l~~~g~~ls~~ 120 (182)
T d1y1xa_ 50 PFSLAT---TEKLLHMYDKNHSGEITFDEFKDLHHF------ILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQ 120 (182)
T ss_dssp CCCHHH---HHHHHHHHCTTCSSSBCHHHHHHHHHH------HHHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHH
T ss_pred cCchhh---hhhhhcccccccccccccccccccccc------ccccccchhccccccchhhhhHHHHHHHHHhCCchhHH
Confidence 345544 457778889999999999999887654 25678899999999999999999999887776667788
Q ss_pred HHHHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcce--eHHHHHHH
Q 010013 446 HLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRI--NYEEFAAM 505 (520)
Q Consensus 446 ~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i--~~~ef~~~ 505 (520)
.+..+|+.+|.|++|.|+.+||..++..+ ..+.++|+.+|.+++|.| +|+||+.-
T Consensus 121 e~~~i~~~~d~~~dg~I~~~eF~~~~~~l-----~~~~~~F~~~D~~~~G~is~~~~~f~~~ 177 (182)
T d1y1xa_ 121 TFQALMRKFDRQRRGSLGFDDYVELSIFV-----CRVRNVFAFYDRERTGQVTFTFDTFIGG 177 (182)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHHHHH-----HHHHHHHHHHCTTCCSEEEEEHHHHHHH
T ss_pred HHHHHHhhcccCCCCCcCHHHHHHHHHHH-----HHHHHHHHHhCCCCCCcEEeeHHHHHHH
Confidence 89999999999999999999999988654 457889999999999995 78999874
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Probab=99.48 E-value=6.3e-14 Score=121.69 Aligned_cols=120 Identities=17% Similarity=0.253 Sum_probs=100.7
Q ss_pred hHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhh
Q 010013 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEY 453 (520)
Q Consensus 374 ~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~ 453 (520)
.+..++..+|.|++|.|+.+||..++..+ ..++.+|..+|.|++|.|+..||..++...+...+.+.+..++..
T Consensus 64 ~~~~li~~~D~d~~G~i~~~EF~~l~~~~------~~~~~~F~~~D~d~sG~i~~~El~~~l~~~g~~~~~~~~~~l~~~ 137 (188)
T d1qxpa2 64 SCRSMVNLMDRDGNGKLGLVEFNILWNRI------RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVAR 137 (188)
T ss_dssp HHHHHHHHHCC--CCCCCSSSHHHHHHHH------HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCcccHHHHHHHHhhh------HHHHHHHHHhCCCCCCEECHHHHHHHHHHhhhcCCHHHHHHHHHH
Confidence 46788889999999999999999887654 568899999999999999999999988876666667777777777
Q ss_pred hcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcce--eHHHHHHH
Q 010013 454 FDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRI--NYEEFAAM 505 (520)
Q Consensus 454 ~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i--~~~ef~~~ 505 (520)
+ .|++|.|+++||..++..+ +.+..+|+.+|.+++|.| +++||+.+
T Consensus 138 ~-~~~dg~i~f~eFi~~~~~l-----~~~~~~F~~~D~~~~G~i~l~~~efl~~ 185 (188)
T d1qxpa2 138 F-ADDELIIDFDNFVRCLVRL-----EILFKIFKQLDPENTGTIQLDLISWLSF 185 (188)
T ss_dssp T-SCSSSBCCHHHHHHHHHHH-----HHHHHHHHHSCSSCCSCEEEEHHHHHHH
T ss_pred h-cCCCCcCCHHHHHHHHHHH-----HHHHHHHHHhCCCCCCeEEeeHHHHHHH
Confidence 5 6999999999999988754 457789999999999976 99999875
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.47 E-value=9.2e-14 Score=101.72 Aligned_cols=69 Identities=36% Similarity=0.624 Sum_probs=64.7
Q ss_pred hhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHcC
Q 010013 441 VEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRKG 509 (520)
Q Consensus 441 ~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~~ 509 (520)
.+++++++.+|+.||.|++|+|+.+||+.+|+.++.. +..++.++|..+|.|++|.|+|+||+++|++.
T Consensus 5 ~d~~e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~~~~~~D~d~~G~I~~~EF~~~m~k~ 74 (77)
T d1oqpa_ 5 RDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKT 74 (77)
T ss_dssp SSHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHcCCCCCEechHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHcc
Confidence 3567789999999999999999999999999999988 88999999999999999999999999999863
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.47 E-value=3.5e-15 Score=127.86 Aligned_cols=136 Identities=13% Similarity=0.186 Sum_probs=94.5
Q ss_pred HHHHhcc--cCCCCCCcccHHHHhhhhhhcCCCC--CHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHH
Q 010013 375 LKEMFKS--MDTDNSGTITFEELKAGLPKLGTRL--SESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKA 450 (520)
Q Consensus 375 l~~~F~~--~D~~~~g~i~~~e~~~~l~~~~~~~--~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~ 450 (520)
|+++|.. +|.|++|.|+.+||.+++...+... ..+.+..++...|.+++|.|+|+||..++..+. ...++..+
T Consensus 7 l~k~~~k~~~d~n~dG~Is~~el~k~l~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~F~eF~~~~~~l~---~r~ei~~~ 83 (170)
T d2zkmx1 7 LDKILVKLKMQLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLC---PRPEIDEI 83 (170)
T ss_dssp HHHHHHHHHHSCCTTSCEEHHHHHHHSCSCHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHS---CCHHHHTT
T ss_pred HHHHHHHHhcccCCCCCCcHHHHHHHHHHhhhhHHHHHHHHhhhhccccccCCCccCHHHHHHHHhccC---CHHHHHHH
Confidence 4455554 7999999999999999997654322 234566777788999999999999999876543 23568899
Q ss_pred HhhhcCCCCCceeHHHHHHHHHhcCCC-----------CHHHHHHHHHHhcCCCC----cceeHHHHHHHHHcCCCCC
Q 010013 451 FEYFDKDNSGYITMEELEHALKKYNMG-----------DAKTIKEIIAEVDIDND----GRINYEEFAAMMRKGNPDM 513 (520)
Q Consensus 451 F~~~D~d~dG~I~~~El~~~l~~~~~~-----------~~~~~~~~~~~~d~~~d----g~i~~~ef~~~l~~~~~~~ 513 (520)
|+.||.|++|+||.+||..+|...... +.+.+.+++..+..+.+ |.|++++|..+|....-..
T Consensus 84 F~~~d~d~~~~it~~el~~fL~~~Q~~~~~~e~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ls~d~F~~fL~S~en~i 161 (170)
T d2zkmx1 84 FTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPEGMVWFLCGPENSV 161 (170)
T ss_dssp CC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC--------CCHHHHHHHHHSTTSCS
T ss_pred HHHHcCCCCCcccHHHHHHHHHHHhcchhhhhhccccCCHHHHHHHHHHHccccccccCCeECHHHHHHHHcCccCCC
Confidence 999999999999999999999875432 44568889999877654 8899999999987654333
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.46 E-value=9.2e-14 Score=98.58 Aligned_cols=62 Identities=26% Similarity=0.554 Sum_probs=59.7
Q ss_pred HHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 447 LYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 447 ~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
++.+|+.||.|++|+|+..||+.+++.+|.. ++++++++|..+|.|+||.|+|+||+.+|++
T Consensus 3 ~r~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~~i~~~~~~~D~d~dg~I~~~EF~~~m~~ 65 (67)
T d1tiza_ 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK 65 (67)
T ss_dssp HHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred HHHHHHHHCCCCcCcCcHHHHHHHHHHhccccchHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 6889999999999999999999999999998 8999999999999999999999999999975
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Probab=99.46 E-value=8.5e-14 Score=102.77 Aligned_cols=67 Identities=39% Similarity=0.684 Sum_probs=63.2
Q ss_pred hhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 442 ~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.++++++.+|+.||.|++|+|+.+||+.++..+|.. ++++++.+|..+|.|+||.|+|+||+.+|+.
T Consensus 12 ~~ee~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~ev~~~~~~~D~d~dg~I~~~EF~~~m~~ 79 (81)
T d1fi5a_ 12 KTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 79 (81)
T ss_dssp CCHHHHHHHHHHHCSSCSSEECHHHHHHHHHTSSSCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHSC
T ss_pred CCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 456789999999999999999999999999999988 8999999999999999999999999999874
|
| >d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Rattus norvegicus [TaxId: 10116]
Probab=99.46 E-value=4e-14 Score=102.40 Aligned_cols=71 Identities=42% Similarity=0.686 Sum_probs=68.0
Q ss_pred hhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhh
Q 010013 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (520)
Q Consensus 366 ~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 436 (520)
+++++++.+++++|+.||.|++|+|+..||..++..+|..++++++..++..+|.|++|.|+|+||+.++.
T Consensus 1 qLs~eei~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~~~~~~~~~~D~d~~g~I~f~eF~~~m~ 71 (73)
T d2pq3a1 1 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 71 (73)
T ss_dssp CCCHHHHHHHHHHHHHTCTTSSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHcCCCCceEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 47889999999999999999999999999999999999999999999999999999999999999998764
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=99.45 E-value=3e-14 Score=101.16 Aligned_cols=64 Identities=28% Similarity=0.568 Sum_probs=60.5
Q ss_pred HHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC--CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 445 EHLYKAFEYFDKDNSGYITMEELEHALKKYNMG--DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 445 ~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~--~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
++++.+|+.||.|++|+|+.+||+.+|..+|.. ++++++.+|+.+|.|+||.|+|+||+.+|.+
T Consensus 2 eel~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~s~~e~~~~~~~~D~d~dG~i~~~EF~~~m~r 67 (68)
T d1c7va_ 2 EEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKK 67 (68)
T ss_dssp HHHHHHHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCCcCeEcHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 568999999999999999999999999999874 8999999999999999999999999999975
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Probab=99.45 E-value=6.1e-14 Score=103.56 Aligned_cols=69 Identities=33% Similarity=0.579 Sum_probs=64.8
Q ss_pred hHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhc
Q 010013 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (520)
Q Consensus 368 ~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 437 (520)
|++++++++++|+.+|.|++|+|+..||..++..+| .++.++++.+|..+|.|++|.|+|+||+.++..
T Consensus 1 T~ee~~e~~~~F~~~D~d~~G~I~~~El~~~l~~lg-~~~~~ei~~~~~~~D~d~~G~I~~~EF~~~~~~ 69 (81)
T d2opoa1 1 TPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARA 69 (81)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhh-cCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 578899999999999999999999999999999999 589999999999999999999999999997754
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.45 E-value=4.2e-14 Score=103.61 Aligned_cols=73 Identities=42% Similarity=0.641 Sum_probs=69.3
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhc
Q 010013 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 437 (520)
..++++++.++.++|+.+|.|++|+|+.+||..+|..+|..++.+++..++..+|.+++|.|+|+||+.++..
T Consensus 2 ~~lt~eqi~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~t~~e~~~~~~~~D~~~~g~I~~~eF~~~m~~ 74 (77)
T d1f54a_ 2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSR 74 (77)
T ss_dssp CCCCHHHHHHHHHHHHHTCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHTTCCSSCCEEEHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCCeEChHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 4578999999999999999999999999999999999999999999999999999999999999999998753
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.44 E-value=8.1e-14 Score=102.86 Aligned_cols=72 Identities=36% Similarity=0.572 Sum_probs=68.8
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhh
Q 010013 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 436 (520)
..++++++.++.++|..||.|++|+|+..||..+|..+|..+++.+++.+|..+|.|++|.|+|+||+.++.
T Consensus 6 ~~Lt~~~i~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~e~~~~~~~~D~d~~g~I~~~eF~~~m~ 77 (81)
T d1avsa_ 6 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMV 77 (81)
T ss_dssp HHBCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCCeEchhHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence 457899999999999999999999999999999999999999999999999999999999999999999775
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=99.44 E-value=8.1e-14 Score=102.80 Aligned_cols=75 Identities=28% Similarity=0.491 Sum_probs=70.6
Q ss_pred HHHhhhhHHHHhhHHHHhcccCCCC-CCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhh
Q 010013 362 VIAENLSEEEIMGLKEMFKSMDTDN-SGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (520)
Q Consensus 362 ~i~~~~~~~~~~~l~~~F~~~D~~~-~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 436 (520)
....+++++++++++++|..||.++ +|+|+..||..+|..+|..+++++++.++..+|.|++|.|+|+||+.++.
T Consensus 4 ~~~~~ls~eq~~~~~~~F~~fD~d~~~G~I~~~el~~~l~~lg~~~t~~el~~~i~~~D~d~~G~I~f~eFl~im~ 79 (82)
T d1wrka1 4 AAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 79 (82)
T ss_dssp HHHHHCCHHHHHHHHHHHHHHTTTCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCCSSBCHHHHHHHHH
T ss_pred HHHhhCCHHHHHHHHHHHHHHcCcCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence 3457899999999999999999995 79999999999999999999999999999999999999999999999875
|
| >d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.44 E-value=1.2e-13 Score=95.72 Aligned_cols=60 Identities=28% Similarity=0.611 Sum_probs=57.3
Q ss_pred HHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHH
Q 010013 445 EHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAA 504 (520)
Q Consensus 445 ~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~ 504 (520)
++++.+|+.||++++|+|+.+||+.+|..+|.. ++.++..+|+.+|.|++|.|+|+||++
T Consensus 1 Eel~~aF~~fD~~~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~D~d~dg~I~~~eFl~ 61 (61)
T d2fcea1 1 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIE 61 (61)
T ss_dssp HHHHHHHHHHCTTCCSCEEHHHHHHHHHHTTCCCCHHHHHHHHTTCCCCTTSEECHHHHHH
T ss_pred ChHHHHHHHHCCCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHhcC
Confidence 468899999999999999999999999999998 999999999999999999999999985
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.42 E-value=3.1e-13 Score=99.68 Aligned_cols=65 Identities=34% Similarity=0.580 Sum_probs=61.2
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..+++.+|+.||.|++|+|+..||+.+|+.+|.. ++.++.++|..+|.|+||.|+|+||+.+|.+
T Consensus 13 i~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~e~~~~~~~~D~d~~g~I~~~eF~~~m~~ 78 (81)
T d1avsa_ 13 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 78 (81)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCeEchhHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 3468899999999999999999999999999998 9999999999999999999999999999874
|
| >d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=99.42 E-value=1.5e-14 Score=108.30 Aligned_cols=75 Identities=68% Similarity=0.993 Sum_probs=70.7
Q ss_pred HHHHhhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHh
Q 010013 361 KVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITAT 435 (520)
Q Consensus 361 ~~i~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~ 435 (520)
..|+..++++++.+++++|+.+|+|++|+|+.+||..+++.+|..+++++++.+|..+|.|++|.|+|+||+.++
T Consensus 11 ~~ma~~l~~~~i~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~e~~~l~~~~D~d~~g~I~~~EFl~am 85 (87)
T d1s6ja_ 11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAAT 85 (87)
T ss_dssp HHSSSSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECHHHHTTCC
T ss_pred HHHHhhCCHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHH
Confidence 345678999999999999999999999999999999999999999999999999999999999999999999765
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Probab=99.41 E-value=3.7e-13 Score=99.23 Aligned_cols=66 Identities=30% Similarity=0.531 Sum_probs=61.3
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcceeHHHHHHHHHcC
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRKG 509 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~~ 509 (520)
...++.+|+.||.|++|+|+..||+.+|+.+|..+++++.++|+.+|.|++|.|+|+||+.+|+..
T Consensus 5 ~~e~~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~ei~~~~~~~D~d~~G~I~~~EF~~~~~~~ 70 (81)
T d2opoa1 5 IADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN 70 (81)
T ss_dssp HHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTTTCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhhcCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHC
Confidence 357899999999999999999999999999996688999999999999999999999999999763
|
| >d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=99.40 E-value=5.3e-14 Score=105.27 Aligned_cols=84 Identities=35% Similarity=0.468 Sum_probs=69.0
Q ss_pred CCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeH
Q 010013 421 DGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINY 499 (520)
Q Consensus 421 ~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~ 499 (520)
+.+|.|+..+.... ..........++.+|+.||+|++|+|+.+||+.+|+.+|.. ++++++++|+.+|.|++|.|+|
T Consensus 1 ~~~g~id~~~~~ma--~~l~~~~i~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~e~~~l~~~~D~d~~g~I~~ 78 (87)
T d1s6ja_ 1 HSSGHIDDDDKHMA--ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDY 78 (87)
T ss_dssp CCSSSSSSHHHHSS--SSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECH
T ss_pred CCCCccCchHHHHH--hhCCHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeH
Confidence 35788888875432 11111222358899999999999999999999999999988 8999999999999999999999
Q ss_pred HHHHHHH
Q 010013 500 EEFAAMM 506 (520)
Q Consensus 500 ~ef~~~l 506 (520)
+||+.+|
T Consensus 79 ~EFl~am 85 (87)
T d1s6ja_ 79 GEFIAAT 85 (87)
T ss_dssp HHHTTCC
T ss_pred HHHHHHH
Confidence 9998765
|
| >d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Rattus norvegicus [TaxId: 10116]
Probab=99.38 E-value=4.2e-13 Score=96.87 Aligned_cols=64 Identities=34% Similarity=0.647 Sum_probs=61.0
Q ss_pred HHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 445 EHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 445 ~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.+++.+|+.||.|++|+|+..||+.++..+|.. +++++.+++..+|.|++|.|+|+||+.+|.+
T Consensus 8 ~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~~~~~~~~~~D~d~~g~I~f~eF~~~m~~ 72 (73)
T d2pq3a1 8 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 72 (73)
T ss_dssp HHHHHHHHHTCTTSSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCceEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence 578899999999999999999999999999998 9999999999999999999999999999864
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.38 E-value=5.1e-13 Score=97.68 Aligned_cols=65 Identities=29% Similarity=0.632 Sum_probs=61.3
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..+++.+|+.||.|++|+|+.+||+.+|+.+|.. +++++.+++..+|.+++|.|+|+||+.+|.+
T Consensus 9 i~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~t~~e~~~~~~~~D~~~~g~I~~~eF~~~m~~ 74 (77)
T d1f54a_ 9 IAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSR 74 (77)
T ss_dssp HHHHHHHHHHTCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHTTCCSSCCEEEHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCCCeEChHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 3468899999999999999999999999999998 8999999999999999999999999999865
|
| >d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: EHCABP species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]
Probab=99.37 E-value=9.5e-13 Score=108.08 Aligned_cols=98 Identities=24% Similarity=0.415 Sum_probs=87.0
Q ss_pred HHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC----CHHHHHHHH
Q 010013 411 VRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG----DAKTIKEII 486 (520)
Q Consensus 411 ~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~----~~~~~~~~~ 486 (520)
.+.+|..+|.|++|.|++.||..++.......+.+.+..+|+.+|.+++|.|+.+||.+++...... ....++.+|
T Consensus 2 ae~~F~~~D~d~dG~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~F 81 (134)
T d1jfja_ 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLY 81 (134)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCcCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccc
Confidence 4689999999999999999999998887777788899999999999999999999999988765433 244578899
Q ss_pred HHhcCCCCcceeHHHHHHHHHc
Q 010013 487 AEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 487 ~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..+|.+++|.|+.+||..++..
T Consensus 82 ~~~D~~~~g~i~~~el~~~~~~ 103 (134)
T d1jfja_ 82 KLMDVDGDGKLTKEEVTSFFKK 103 (134)
T ss_dssp HHHCCSSSSEEEHHHHHHHHTT
T ss_pred cccccccCCcccHHHHHHHHHh
Confidence 9999999999999999999875
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=99.36 E-value=1.4e-12 Score=96.04 Aligned_cols=66 Identities=27% Similarity=0.545 Sum_probs=61.4
Q ss_pred hHHHHHHHHhhhcCCC-CCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 443 REEHLYKAFEYFDKDN-SGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 443 ~~~~~~~~F~~~D~d~-dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
....++.+|+.||+|+ +|+|+..||+.+|+.+|.. ++.+++++++.+|.|+||.|+|+||+.+|.+
T Consensus 13 q~~~~~~~F~~fD~d~~~G~I~~~el~~~l~~lg~~~t~~el~~~i~~~D~d~~G~I~f~eFl~im~~ 80 (82)
T d1wrka1 13 QKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 80 (82)
T ss_dssp HHHHHHHHHHHHTTTCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCCSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCcCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence 3457889999999995 8999999999999999998 9999999999999999999999999999975
|
| >d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Recoverin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.34 E-value=1.1e-12 Score=115.86 Aligned_cols=121 Identities=20% Similarity=0.259 Sum_probs=101.9
Q ss_pred CCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHh-cCCCCCceehhhhHHHhhccchh-hhHHHHHHHHhhhcCCCCCcee
Q 010013 386 NSGTITFEELKAGLPKLGTRLSESEVRQLMEAA-DVDGNGTIDYIEFITATMHMNRV-EREEHLYKAFEYFDKDNSGYIT 463 (520)
Q Consensus 386 ~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~-d~~~~g~i~~~ef~~~~~~~~~~-~~~~~~~~~F~~~D~d~dG~I~ 463 (520)
..|.|+.+++..+..... .+..+++.+++.| +.+++|.|+++||..++...... .....+..+|+.+|.|++|.|+
T Consensus 4 ~~~~l~~e~l~~l~~~t~--f~~~ei~~l~~~F~~~~~~G~is~~EF~~~l~~~~~~~~~~~~~~~if~~~D~~~~G~I~ 81 (201)
T d1omra_ 4 KSGALSKEILEELQLNTK--FTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLD 81 (201)
T ss_dssp SSCTHHHHHHHHHGGGCS--SCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCCHHHHHHHHHTTTSCSSSEEE
T ss_pred ccCCCCHHHHHHHHHhCC--CCHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHhcCCCCHHHHHHHHHHHhccCCCCeEe
Confidence 568899999988777544 6889999999986 67789999999999987755433 3455678899999999999999
Q ss_pred HHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 464 MEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 464 ~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..||..++..+... .++.++.+|+.+|.|++|.|+++||..++..
T Consensus 82 f~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~is~~E~~~~~~~ 127 (201)
T d1omra_ 82 FKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTA 127 (201)
T ss_dssp HHHHHHHHHHHHSSCGGGSHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred ehhHHHHHHhhcccchHHHHHHHHHHHccCCCCccCHHHHHHHHHH
Confidence 99999988876555 5566999999999999999999999998864
|
| >d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.34 E-value=1.2e-12 Score=114.35 Aligned_cols=111 Identities=27% Similarity=0.409 Sum_probs=92.7
Q ss_pred HHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccc------------hhh
Q 010013 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN------------RVE 442 (520)
Q Consensus 375 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~------------~~~ 442 (520)
..++|+.+|.+++|.|+..||..++..++....++.++.+|+.+|.|++|.|+++||..++.... ...
T Consensus 65 ~~~if~~~D~~~~G~I~~~Ef~~~~~~~~~~~~~e~~~~~F~~~D~d~dG~is~~E~~~~~~~~~~~~~~~~~~~~~~~~ 144 (190)
T d1fpwa_ 65 ANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEAT 144 (190)
T ss_dssp HHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCC
T ss_pred HHHHHHHhCcCCCCcccHHHHHHHHHHHccCchHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHHhcccccCCCchhhh
Confidence 46899999999999999999999999988888889999999999999999999999998764321 112
Q ss_pred hHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhc
Q 010013 443 REEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVD 490 (520)
Q Consensus 443 ~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d 490 (520)
....+..+|+.+|.|+||.||.+||+.++... ..+.+.|..+|
T Consensus 145 ~~~~v~~if~~~D~d~dG~Is~~EF~~~~~~~-----p~i~~~l~~~d 187 (190)
T d1fpwa_ 145 PEMRVKKIFKLMDKNEDGYITLDEFREGSKVD-----PSIIGALNLYD 187 (190)
T ss_dssp HHHHHHHHHHHHTTTCSSEEEHHHHHHHHHSS-----TTHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHC-----HHHHHHhhhhc
Confidence 35678899999999999999999999998752 13455666554
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.33 E-value=6e-13 Score=93.55 Aligned_cols=63 Identities=33% Similarity=0.705 Sum_probs=59.5
Q ss_pred hhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHh
Q 010013 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITAT 435 (520)
Q Consensus 373 ~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~ 435 (520)
++|.++|+.||.|++|+|+.+||+.++..+|..++.++++.++..+|.|++|.|+|+||+.+|
T Consensus 3 eel~~aF~~fD~d~~G~I~~~el~~~l~~lg~~~~~~e~~~l~~~~D~d~~g~I~~~eF~~~m 65 (65)
T d1fw4a_ 3 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 65 (65)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCSSSEEHHHHHHHC
T ss_pred HHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHC
Confidence 357899999999999999999999999999999999999999999999999999999998754
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.32 E-value=8.9e-13 Score=95.50 Aligned_cols=65 Identities=29% Similarity=0.489 Sum_probs=61.3
Q ss_pred hhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhc
Q 010013 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (520)
Q Consensus 373 ~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 437 (520)
+++.++|+.||.+++|+|+..||..+|..+|..++.++++.++..+|.|++|.|+|+||+.++..
T Consensus 9 eel~~~F~~fD~~~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~D~d~dg~I~~~EF~~~m~~ 73 (75)
T d1jc2a_ 9 EELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 73 (75)
T ss_dssp HHHHHHHHHHCCSTTSSEEHHHHHHHHHHSSSCCCHHHHHHHHHHHCSSSCSEECHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCcCeEcHHHHHHHHHhcCCCccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 46889999999999999999999999999999999999999999999999999999999988754
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.32 E-value=1e-12 Score=93.09 Aligned_cols=64 Identities=22% Similarity=0.500 Sum_probs=59.8
Q ss_pred hHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhc
Q 010013 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (520)
Q Consensus 374 ~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 437 (520)
.++++|+.+|.|++|+|+..||..++..+|..++.++++.+|..+|.|++|.|+|+||+.++..
T Consensus 2 ~~r~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~~i~~~~~~~D~d~dg~I~~~EF~~~m~~ 65 (67)
T d1tiza_ 2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK 65 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred hHHHHHHHHCCCCcCcCcHHHHHHHHHHhccccchHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 3678999999999999999999999999999999999999999999999999999999988753
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=99.32 E-value=4.4e-12 Score=98.90 Aligned_cols=101 Identities=20% Similarity=0.285 Sum_probs=79.6
Q ss_pred hhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc---chhh
Q 010013 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM---NRVE 442 (520)
Q Consensus 366 ~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~---~~~~ 442 (520)
.++.+++.++.. .+ +++|.|+.+||..++... ..+.++++.+|..+|.|++|.|+.+|+..++..+ ....
T Consensus 5 ~l~~eeI~~~~~---~~--d~dG~idf~EF~~~~~~~--~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~l 77 (109)
T d1pvaa_ 5 LLKADDIKKALD---AV--KAEGSFNHKKFFALVGLK--AMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDL 77 (109)
T ss_dssp HSCHHHHHHHHH---HT--CSTTCCCHHHHHHHHTCT--TSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCC
T ss_pred cCCHHHHHHHHH---hc--CCCCCCcHHHHHHHHHHc--cCCHHHHHHHhhCccCCCcCeEcHHHHHHHHHHhhhcCCCC
Confidence 345555544433 33 467889999998776432 3467889999999999999999999998877654 2345
Q ss_pred hHHHHHHHHhhhcCCCCCceeHHHHHHHHHh
Q 010013 443 REEHLYKAFEYFDKDNSGYITMEELEHALKK 473 (520)
Q Consensus 443 ~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~ 473 (520)
+.+++..+|+.+|.|+||.|+++||.+++..
T Consensus 78 s~~ev~~~~~~~D~d~dG~I~~~EF~~~m~~ 108 (109)
T d1pvaa_ 78 TDAETKAFLKAADKDGDGKIGIDEFETLVHE 108 (109)
T ss_dssp CHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred CHHHHHHHHHHHCCCCcCcEeHHHHHHHHHh
Confidence 6788999999999999999999999998863
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Probab=99.30 E-value=6.4e-12 Score=97.94 Aligned_cols=101 Identities=17% Similarity=0.254 Sum_probs=79.1
Q ss_pred hhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc---chhh
Q 010013 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM---NRVE 442 (520)
Q Consensus 366 ~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~---~~~~ 442 (520)
-++.+++. +++..+| .+|.|+..||..++.. ...+.++++.+|..+|.|++|.|+.+|+..++... +...
T Consensus 5 ~l~~~di~---~~~~~~~--~~G~idf~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~~ 77 (109)
T d5pala_ 5 VLKADDIN---KAISAFK--DPGTFDYKRFFHLVGL--KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDL 77 (109)
T ss_dssp TSCHHHHH---HHHHHTC--STTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCC
T ss_pred HccHHHHH---HHHHhcC--CCCcCcHHHHHHHHHh--cCCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHhhhccCcC
Confidence 34555554 4444554 4688999999876642 23467889999999999999999999998876543 3345
Q ss_pred hHHHHHHHHhhhcCCCCCceeHHHHHHHHHh
Q 010013 443 REEHLYKAFEYFDKDNSGYITMEELEHALKK 473 (520)
Q Consensus 443 ~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~ 473 (520)
+.+++..+|+.+|.|+||.|+++||.+++..
T Consensus 78 ~~~e~~~~~~~~D~d~dG~I~~~EF~~~m~~ 108 (109)
T d5pala_ 78 NDTETKALLAAGDSDHDGKIGADEFAKMVAQ 108 (109)
T ss_dssp CHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence 6788999999999999999999999998864
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Probab=99.29 E-value=1.8e-12 Score=95.49 Aligned_cols=65 Identities=32% Similarity=0.583 Sum_probs=60.8
Q ss_pred hhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhc
Q 010013 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (520)
Q Consensus 373 ~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 437 (520)
.+|.++|+.||.|++|+|+..||..++..+|..++.++++.+|..+|.|++|+|+|+||+.++..
T Consensus 15 e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~ev~~~~~~~D~d~dg~I~~~EF~~~m~~ 79 (81)
T d1fi5a_ 15 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 79 (81)
T ss_dssp HHHHHHHHHHCSSCSSEECHHHHHHHHHTSSSCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHSC
T ss_pred HHHHHHHHHHcCCCCCcccHHHHHHHHHhcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 46889999999999999999999999999999999999999999999999999999999988753
|
| >d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.29 E-value=1.3e-12 Score=90.48 Aligned_cols=60 Identities=33% Similarity=0.693 Sum_probs=57.6
Q ss_pred hHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHH
Q 010013 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFIT 433 (520)
Q Consensus 374 ~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~ 433 (520)
++.++|+.||++++|+|+.+||..++..+|..++..+++.+|..+|.|++|.|+|+||+.
T Consensus 2 el~~aF~~fD~~~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~D~d~dg~I~~~eFl~ 61 (61)
T d2fcea1 2 DFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIE 61 (61)
T ss_dssp HHHHHHHHHCTTCCSCEEHHHHHHHHHHTTCCCCHHHHHHHHTTCCCCTTSEECHHHHHH
T ss_pred hHHHHHHHHCCCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHhcC
Confidence 578999999999999999999999999999999999999999999999999999999973
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=99.28 E-value=1.3e-12 Score=92.57 Aligned_cols=64 Identities=38% Similarity=0.618 Sum_probs=59.6
Q ss_pred hhHHHHhcccCCCCCCcccHHHHhhhhhhcCCC-CCHHHHHHHHHHhcCCCCCceehhhhHHHhh
Q 010013 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTR-LSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (520)
Q Consensus 373 ~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~-~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 436 (520)
+++.++|+.||.+++|+|+.+||..++..+|.. .+.++++.++..+|.|++|.|+|+||+.++.
T Consensus 2 eel~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~s~~e~~~~~~~~D~d~dG~i~~~EF~~~m~ 66 (68)
T d1c7va_ 2 EEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIK 66 (68)
T ss_dssp HHHHHHHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcCeEcHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence 358899999999999999999999999999875 6999999999999999999999999998774
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.27 E-value=2.3e-12 Score=94.12 Aligned_cols=66 Identities=33% Similarity=0.514 Sum_probs=61.3
Q ss_pred HhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhc
Q 010013 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (520)
Q Consensus 372 ~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 437 (520)
.+++.++|+.+|.|++|+|+.+||..+|..++..++.+++..+|..+|.|++|.|+|+||+.++..
T Consensus 8 ~e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~~~~~~D~d~~G~I~~~EF~~~m~k 73 (77)
T d1oqpa_ 8 REEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK 73 (77)
T ss_dssp HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCEechHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHc
Confidence 456899999999999999999999999999999999999999999999999999999999988753
|
| >d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Guanylate cyclase activating protein 2, GCAP-2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.26 E-value=1.1e-11 Score=108.22 Aligned_cols=118 Identities=18% Similarity=0.187 Sum_probs=95.8
Q ss_pred cccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCC-CCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHH
Q 010013 389 TITFEELKAGLPKLGTRLSESEVRQLMEAADVD-GNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEEL 467 (520)
Q Consensus 389 ~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~-~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El 467 (520)
.++.+|+...- .. ...+..+++.+|+.|..+ .+|.|+++||..++.......+...+..+|+.+|.|++|.|+..||
T Consensus 3 ~~~~e~~~~~~-~~-~~~~~~ei~~~~~~F~~~~~~G~i~~~Ef~~~l~~~~~~~~~~~~~~lf~~~D~d~dG~I~f~Ef 80 (189)
T d1jbaa_ 3 QFSWEEAEENG-AV-GAADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEY 80 (189)
T ss_dssp CSSCHHHHHSS-SC-CHHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHH
T ss_pred CCCHHHHHHHh-cc-CccCHHHHHHHHHHhcccCCCCeeeHHHHHHHHHHcCCCccHHHHHHHHHHhccCCCCeEeehhH
Confidence 35555544422 11 124557899999998765 5899999999998876666667788999999999999999999999
Q ss_pred HHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 468 EHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 468 ~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
...+..+... .++.++.+|+.+|.|++|.|+++||..++..
T Consensus 81 ~~~l~~~~~~~~~~~~~~~F~~~D~d~~g~i~~~E~~~~~~~ 122 (189)
T d1jbaa_ 81 VAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVES 122 (189)
T ss_dssp HHHHHHHSSCCCTHHHHHHHHHHCSSCSSCBCHHHHHHHHHH
T ss_pred HHHHHhhcccchHHHHHHHHhhhccCCCCcccHhHHHHHHHH
Confidence 9999887655 6678999999999999999999999998764
|
| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.25 E-value=2.5e-12 Score=93.54 Aligned_cols=66 Identities=35% Similarity=0.588 Sum_probs=57.5
Q ss_pred hHHHHHHHHhhhcCC--CCCceeHHHHHHHHHhcCCC---CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 443 REEHLYKAFEYFDKD--NSGYITMEELEHALKKYNMG---DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 443 ~~~~~~~~F~~~D~d--~dG~I~~~El~~~l~~~~~~---~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
+.++++.+|+.||.+ ++|+|+.+||+.+|..+|.. ++.++.++|..+|.|+||.|+|+||+.+|.+
T Consensus 3 s~eel~~~F~~fd~~~~~~G~I~~~El~~~l~~lg~~~~~~~~ei~~~~~~~D~d~dG~I~f~EF~~~m~~ 73 (76)
T d1qx2a_ 3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKK 73 (76)
T ss_dssp CHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred CHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHhCCcCCCCHHHHHHHHHHhhcCCCCcCcHHHHHHHHHH
Confidence 457899999999664 57999999999999998754 3457999999999999999999999999875
|
| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]
Probab=99.24 E-value=1e-11 Score=103.44 Aligned_cols=100 Identities=23% Similarity=0.288 Sum_probs=87.4
Q ss_pred HHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC--CHHHHHHHHH
Q 010013 410 EVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG--DAKTIKEIIA 487 (520)
Q Consensus 410 ~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~--~~~~~~~~~~ 487 (520)
+++.+|..+|.+++|.|+++||..++.......+...+..+|+.+|.+++|.|+.+||..++...... ..+.+..+|.
T Consensus 10 ~l~~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~ 89 (146)
T d1exra_ 10 EFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFK 89 (146)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHhhccChHHHHHHHHH
Confidence 46788999999999999999999988776666778889999999999999999999999988643222 4567899999
Q ss_pred HhcCCCCcceeHHHHHHHHHcC
Q 010013 488 EVDIDNDGRINYEEFAAMMRKG 509 (520)
Q Consensus 488 ~~d~~~dg~i~~~ef~~~l~~~ 509 (520)
.+|.|++|.|+.+||..++..-
T Consensus 90 ~~D~d~~G~i~~~e~~~~l~~~ 111 (146)
T d1exra_ 90 VFDRDGNGLISAAELRHVMTNL 111 (146)
T ss_dssp HHSTTCSSCBCHHHHHHHHHHT
T ss_pred HhCCCCCCcCCHHHHHHHHHHH
Confidence 9999999999999999999863
|
| >d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.23 E-value=8.3e-12 Score=108.67 Aligned_cols=98 Identities=21% Similarity=0.372 Sum_probs=83.7
Q ss_pred HHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc------------chhhh
Q 010013 376 KEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM------------NRVER 443 (520)
Q Consensus 376 ~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~------------~~~~~ 443 (520)
..+|+.+|.+++|.|+.+||..++..+......+.++.+|+.+|.|++|.|+.+|+..++... .....
T Consensus 63 ~~if~~~d~~~dg~I~~~EF~~~l~~~~~~~~~e~l~~~F~~~D~d~dG~i~~~El~~~~~~~~~~~~~~~~~~~~~~~~ 142 (187)
T d1g8ia_ 63 TFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTP 142 (187)
T ss_dssp HHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSH
T ss_pred HHHHHHhCcCCCCCCcHHHHHHHHHHhccCchhhhHHHHHHHHhcCCCCeEcHHHHHHHHHHHhhhhcccccCchhhccH
Confidence 568999999999999999999999887666667789999999999999999999998876421 11223
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHh
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKK 473 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~ 473 (520)
.+.+..+|+.+|.|+||.||.+||++++..
T Consensus 143 ~~~v~~if~~~D~d~dG~Is~~EF~~~~~~ 172 (187)
T d1g8ia_ 143 EKRVDRIFAMMDKNADGKLTLQEFQEGSKA 172 (187)
T ss_dssp HHHHHHHHHHHCSSCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 567889999999999999999999998875
|
| >d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.22 E-value=1.7e-11 Score=101.93 Aligned_cols=102 Identities=16% Similarity=0.194 Sum_probs=87.8
Q ss_pred CHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCC--CCCceeHHHHHHHHHhcCC----CCHH
Q 010013 407 SESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKD--NSGYITMEELEHALKKYNM----GDAK 480 (520)
Q Consensus 407 ~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d--~dG~I~~~El~~~l~~~~~----~~~~ 480 (520)
..++++++|..+|.|++|.|+.+||..++..++...+..++..++..+|.+ ++|.|+.+||..++..... ...+
T Consensus 2 ~~eelke~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~ 81 (145)
T d2mysc_ 2 AADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLPMLQAAANNKDQGTFE 81 (145)
T ss_pred CHHHHHHHHHHHcCCCCCeECHHHHHHHHHHhhhcchhhhhHHHHHHHhhcccccCccchhHHHHHHhhhhhccccchHH
Confidence 357899999999999999999999999988777677788888888888665 6899999999998865422 2456
Q ss_pred HHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 481 TIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 481 ~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
++.++|+.+|.+++|.|+.+||..+|++
T Consensus 82 ~l~~aF~~~D~d~~G~I~~~el~~~l~~ 109 (145)
T d2mysc_ 82 DFVEGLRVFDKEGNGTVMGAELRHVLAT 109 (145)
T ss_pred HHHHHHHHhhcCCCCEEcHHHHHHHHHH
Confidence 7899999999999999999999999986
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Probab=99.21 E-value=3.8e-11 Score=93.72 Aligned_cols=103 Identities=18% Similarity=0.203 Sum_probs=80.0
Q ss_pred HhhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccc---h
Q 010013 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN---R 440 (520)
Q Consensus 364 ~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~---~ 440 (520)
...++.+++. +++..++ .+|.|+.+||..++.... .+.++++.+|..+|.|++|.|+.+||..++..+. .
T Consensus 3 ~~~~~~~~i~---~~~~~~~--~~~~i~f~eF~~~~~~~~--~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~ 75 (109)
T d1rwya_ 3 TDLLSAEDIK---KAIGAFT--AADSFDHKKFFQMVGLKK--KSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDAR 75 (109)
T ss_dssp HHHSCHHHHH---HHHHTTC--STTCCCHHHHHHHHTGGG--SCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCC
T ss_pred hhhcCHHHHH---HHHHhcc--cCCCcCHHHHHHHHcccc--CCHHHHHHHhhcccCCCCCcCcHHHHHHHHHHhccccc
Confidence 3445665554 4444543 357899999988765332 4678899999999999999999999998876543 2
Q ss_pred hhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHh
Q 010013 441 VEREEHLYKAFEYFDKDNSGYITMEELEHALKK 473 (520)
Q Consensus 441 ~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~ 473 (520)
..+..++..+|+.+|.|+||.|+++||.+++..
T Consensus 76 ~~~~~e~~~~~~~~D~d~dG~i~~~EF~~~m~~ 108 (109)
T d1rwya_ 76 DLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE 108 (109)
T ss_dssp CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence 356778999999999999999999999998863
|
| >d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.18 E-value=4.1e-11 Score=98.98 Aligned_cols=102 Identities=21% Similarity=0.348 Sum_probs=89.9
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC--CHHHHHHHH
Q 010013 409 SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG--DAKTIKEII 486 (520)
Q Consensus 409 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~--~~~~~~~~~ 486 (520)
++++++|..+|.|++|.|++.||..++.......+...+..++..+|.+++|.|+..||...+...... ..+.+..+|
T Consensus 6 ~elk~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~l~~~f 85 (141)
T d2obha1 6 QEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAF 85 (141)
T ss_dssp HHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCeEeHHHHHHHHHhcCCchhHHHHHHHHHhhccCCCCeechHHHHHHHHHHHhhhccHHHHHHHH
Confidence 578999999999999999999999988877777788899999999999999999999999888654322 456789999
Q ss_pred HHhcCCCCcceeHHHHHHHHHcCC
Q 010013 487 AEVDIDNDGRINYEEFAAMMRKGN 510 (520)
Q Consensus 487 ~~~d~~~dg~i~~~ef~~~l~~~~ 510 (520)
..+|.+++|.|+.+||..++..-.
T Consensus 86 ~~~d~~~~G~i~~~el~~~l~~~g 109 (141)
T d2obha1 86 KLFDDDETGKISFKNLKRVAKELG 109 (141)
T ss_dssp HHHCTTCSSSBCHHHHHHHHHHTT
T ss_pred HHhcccCCCCccHHHHHHHHHHhC
Confidence 999999999999999999998743
|
| >d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: DJ-1-binding protein, DJBP species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.17 E-value=2.4e-11 Score=90.05 Aligned_cols=63 Identities=19% Similarity=0.359 Sum_probs=59.6
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHH
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMM 506 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l 506 (520)
...+..+|+.+|.+++|+|+.+||+.+|..++.. ++++++.++..+|.|++|.|+|.||+..+
T Consensus 19 ~~~l~~~F~~~D~~~~G~i~~~ef~~~l~~~~~~l~~~e~~~l~~~~d~~~~g~I~y~eFl~~f 82 (83)
T d1wlza1 19 YHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRF 82 (83)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCceEChhHHHHHHHHhCCCCChhHHHHHhhccccCCCCcEeHHHHHHHh
Confidence 4578899999999999999999999999999988 99999999999999999999999999865
|
| >d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Neurocalcin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.17 E-value=7.4e-11 Score=101.95 Aligned_cols=119 Identities=18% Similarity=0.236 Sum_probs=99.0
Q ss_pred CcccHHHHhhhhhhcCCCCCHHHHHHHHHHh-cCCCCCceehhhhHHHhhccchhh-hHHHHHHHHhhhcCCCCCceeHH
Q 010013 388 GTITFEELKAGLPKLGTRLSESEVRQLMEAA-DVDGNGTIDYIEFITATMHMNRVE-REEHLYKAFEYFDKDNSGYITME 465 (520)
Q Consensus 388 g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~-d~~~~g~i~~~ef~~~~~~~~~~~-~~~~~~~~F~~~D~d~dG~I~~~ 465 (520)
-+++.+++..+..... .++++++.++..| +.+++|.|+.+||..++....... ....+..+|+.+|.+++|.|+.+
T Consensus 2 s~l~~~~~~~L~~~t~--fs~~ei~~l~~~F~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~i~~~ 79 (181)
T d1bjfa_ 2 SKLRPEVMQDLLESTD--FTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFR 79 (181)
T ss_dssp CCCCHHHHHHHHHHSS--CCHHHHHHHHHHHHHHSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHH
T ss_pred CCCCHHHHHHHHHhcC--CCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCCCcEeHH
Confidence 3678888888776654 5788899999885 447899999999999877554333 34557889999999999999999
Q ss_pred HHHHHHHhcCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 466 ELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 466 El~~~l~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
||..++..+... .++.++.+|..+|.|+||.|+++||..++..
T Consensus 80 eFl~~~~~~~~~~~~~~~~~~f~~~D~d~dg~i~~~E~~~~~~~ 123 (181)
T d1bjfa_ 80 EFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQA 123 (181)
T ss_dssp HHHHHHHHHTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHhhhchHHHHHHHHHHhccCCCCeecHHHHHHHHHH
Confidence 999999877655 5667999999999999999999999999986
|
| >d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin B-like protein 2 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.16 E-value=5.7e-11 Score=102.82 Aligned_cols=99 Identities=21% Similarity=0.309 Sum_probs=82.0
Q ss_pred HHHHhcccCCCCCCcccHHHHhhhhhhcCCC-CCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc--------chhhhHH
Q 010013 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTR-LSESEVRQLMEAADVDGNGTIDYIEFITATMHM--------NRVEREE 445 (520)
Q Consensus 375 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~-~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~--------~~~~~~~ 445 (520)
...+|+.+|.+++|.|+..||..++..+... ..++.++.+|..+|.|++|.|+.+|+..++... ......+
T Consensus 56 ~~~lf~~~d~~~dg~I~f~EFl~~l~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~e~~~~~~~~~~~~~~~~~~~~~~~ 135 (183)
T d2zfda1 56 ADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIED 135 (183)
T ss_dssp HHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHH
T ss_pred HHHHHHHHccCCCCcCcHHHHHHHHHhhhccCcHHHHHHHhhcccccCCCCCccHHHHHHHHHHHHhhhhcccchHHHHH
Confidence 4688999999999999999999988776543 445679999999999999999999998875421 1223345
Q ss_pred HHHHHHhhhcCCCCCceeHHHHHHHHHh
Q 010013 446 HLYKAFEYFDKDNSGYITMEELEHALKK 473 (520)
Q Consensus 446 ~~~~~F~~~D~d~dG~I~~~El~~~l~~ 473 (520)
.+..+|+.+|.|+||.|+.+||+.++..
T Consensus 136 ~~~~if~~~D~d~dG~Is~~EF~~~~~~ 163 (183)
T d2zfda1 136 IIDKTFEEADTKHDGKIDKEEWRSLVLR 163 (183)
T ss_dssp HHHHHHHHHCSSCSSEECHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 5778999999999999999999998865
|
| >d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: DJ-1-binding protein, DJBP species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.15 E-value=3e-11 Score=89.46 Aligned_cols=64 Identities=22% Similarity=0.379 Sum_probs=60.7
Q ss_pred HhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHh
Q 010013 372 IMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITAT 435 (520)
Q Consensus 372 ~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~ 435 (520)
...+.++|+.+|.+++|+|+.+||..+|..++..+++++++.++..+|.|++|.|+|.||+..+
T Consensus 19 ~~~l~~~F~~~D~~~~G~i~~~ef~~~l~~~~~~l~~~e~~~l~~~~d~~~~g~I~y~eFl~~f 82 (83)
T d1wlza1 19 YHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRF 82 (83)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCceEChhHHHHHHHHhCCCCChhHHHHHhhccccCCCCcEeHHHHHHHh
Confidence 4568999999999999999999999999999999999999999999999999999999999765
|
| >d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.14 E-value=1.4e-10 Score=96.35 Aligned_cols=104 Identities=19% Similarity=0.272 Sum_probs=90.2
Q ss_pred CCCHHH---HHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC--CH
Q 010013 405 RLSESE---VRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG--DA 479 (520)
Q Consensus 405 ~~~~~~---~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~--~~ 479 (520)
++++++ ++.+|..+|.|++|.|+++||..++.......+...+..++..++.++++.++.+++...+...... ..
T Consensus 3 ~ls~~~i~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (146)
T d1lkja_ 3 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSE 82 (146)
T ss_dssp CCCHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCSSSCCEEEHHHHHHHHHHHTCCCCHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhcCCCCCHHHHHHHHHHhccCCcccccHHHHHHHHHHhhccccHH
Confidence 345544 5677999999999999999999988877667778889999999999999999999999988775544 46
Q ss_pred HHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 480 KTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 480 ~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
+.+..+|+.+|.+++|.|+.+||..++..
T Consensus 83 ~~~~~aF~~~D~d~~G~I~~~el~~~l~~ 111 (146)
T d1lkja_ 83 QELLEAFKVFDKNGDGLISAAELKHVLTS 111 (146)
T ss_dssp HHHHHHHHHHCSSSSCEEEHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 67999999999999999999999999876
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.14 E-value=1.1e-10 Score=90.81 Aligned_cols=101 Identities=20% Similarity=0.230 Sum_probs=71.4
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc---chh
Q 010013 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM---NRV 441 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~---~~~ 441 (520)
.-++.+++..+. +.. +.+|.++.++|...+..- ..+.++++.+|..+|.|++|.|+++||..++..+ ...
T Consensus 4 d~ls~~dI~~~l---~~~--~~~~s~~~~~F~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~ 76 (108)
T d1rroa_ 4 DILSAEDIAAAL---QEC--QDPDTFEPQKFFQTSGLS--KMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARE 76 (108)
T ss_dssp GTSCHHHHHHHH---HHT--CSTTCCCHHHHHHHHSGG--GSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCC
T ss_pred hhCCHHHHHHHH---Hhc--ccCCCccHHHHHHHHccC--cCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHHHhccCC
Confidence 345555554433 333 345678888886544322 2466778888999999999999999988877643 223
Q ss_pred hhHHHHHHHHhhhcCCCCCceeHHHHHHHHH
Q 010013 442 EREEHLYKAFEYFDKDNSGYITMEELEHALK 472 (520)
Q Consensus 442 ~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~ 472 (520)
.+.+.+..+|+.+|.|+||.|+++||..+++
T Consensus 77 l~~~~~~~~~~~~D~d~dG~I~~~EF~~~m~ 107 (108)
T d1rroa_ 77 LTESETKSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp CCHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred CCHHHHHHHHHHhCCCCCCeEeHHHHHHHHc
Confidence 4567788889999999999999999888774
|
| >d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium- and integrin-binding protein, CIB species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.14 E-value=6.2e-11 Score=102.02 Aligned_cols=99 Identities=17% Similarity=0.303 Sum_probs=81.3
Q ss_pred HHHHhcccCCC-CCCcccHHHHhhhhhhcC-CCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccc---------hhhh
Q 010013 375 LKEMFKSMDTD-NSGTITFEELKAGLPKLG-TRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN---------RVER 443 (520)
Q Consensus 375 l~~~F~~~D~~-~~g~i~~~e~~~~l~~~~-~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~---------~~~~ 443 (520)
..++|+.+|.+ ++|.|+.+||..++..+. ....++.++.+|..+|.|++|.|+.+|+..++..+. ....
T Consensus 59 ~~rif~~fd~~~~~g~I~f~EFv~~l~~~~~~~~~~~kl~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~ 138 (180)
T d1xo5a_ 59 KERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEM 138 (180)
T ss_dssp HHHHHHHHCCSTTCCEECHHHHHHHHHHHSTTSCHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHC------CCCCTTH
T ss_pred HHHHHHhccCCCCCCcCcHHHHHHHHHHHhhcCCHHHHHHHhhccccCCCCCeeeHHHHHHHHHHHHhccccccccHHHH
Confidence 45788899987 699999999999998765 334567799999999999999999999988765321 1122
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHh
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKK 473 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~ 473 (520)
.+.+..+|+.+|.|+||.||.+||.+++..
T Consensus 139 ~~~v~~~~~~~D~d~dG~Is~~EF~~~~~~ 168 (180)
T d1xo5a_ 139 KQLIDNILEESDIDRDGTINLSEFQHVISR 168 (180)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 445778999999999999999999998874
|
| >d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=99.13 E-value=1.3e-10 Score=95.92 Aligned_cols=96 Identities=15% Similarity=0.279 Sum_probs=82.4
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhc-CCC-CHHHHHHHH
Q 010013 409 SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY-NMG-DAKTIKEII 486 (520)
Q Consensus 409 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~-~~~-~~~~~~~~~ 486 (520)
++++++|..+|.|++|.|++.||..++.......+..++..+++ +++|.|+..||..++... ... ..+++..+|
T Consensus 7 ~e~~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~el~~~~~----~~~~~i~~~eF~~~~~~~~~~~~~~~~l~~aF 82 (142)
T d1wdcb_ 7 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLSGTDSEETIRNAF 82 (142)
T ss_dssp HHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTCSCCCHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCcCChHHHHHHHHHhhcCCCHHHHHHHHH----hccCccccccccccccccccccchhhhHHHhh
Confidence 35778899999999999999999999887776677777777764 678999999999988653 333 678899999
Q ss_pred HHhcCCCCcceeHHHHHHHHHc
Q 010013 487 AEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 487 ~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
+.+|.|++|.|+.+||..++..
T Consensus 83 ~~~D~d~~G~I~~~el~~~l~~ 104 (142)
T d1wdcb_ 83 AMFDEQETKKLNIEYIKDLLEN 104 (142)
T ss_dssp HTTCTTCCSCEEHHHHHHHHHH
T ss_pred hhhcccCCCcccHHHHHHHHHH
Confidence 9999999999999999999976
|
| >d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.11 E-value=3.6e-11 Score=91.24 Aligned_cols=68 Identities=22% Similarity=0.271 Sum_probs=62.6
Q ss_pred hhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhh
Q 010013 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (520)
Q Consensus 367 ~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 436 (520)
+++++.+++.++|+.+|+|++|+|+.+|+..++...+ ++.++++.+|..+|.|++|.|+++||+.++.
T Consensus 4 lt~~e~~~~~~~F~~~D~d~~G~is~~e~~~~l~~~~--l~~~~l~~i~~~~D~d~dG~l~~~EF~~am~ 71 (95)
T d1c07a_ 4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTG--LPSTLLAHIWSLCDTKDCGKLSKDQFALAFH 71 (95)
T ss_dssp SCSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTT--CCHHHHHHHHHHHCTTCSSSEETTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHhcC--CCHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence 5778889999999999999999999999999998876 6788999999999999999999999988764
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=99.11 E-value=1.4e-10 Score=89.99 Aligned_cols=99 Identities=18% Similarity=0.231 Sum_probs=76.3
Q ss_pred hhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccc---hhhh
Q 010013 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMN---RVER 443 (520)
Q Consensus 367 ~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~---~~~~ 443 (520)
++.+++. .+++..+. +|.|+..||...+..- ..+.++++.+|+.+|.|++|.|+..||..++..+. ...+
T Consensus 5 ls~~di~---~~~~~~~~--~gsi~~~eF~~~~~l~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l~~~~~~~~ 77 (107)
T d2pvba_ 5 LKDADVA---AALAACSA--ADSFKHKEFFAKVGLA--SKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALT 77 (107)
T ss_dssp SCHHHHH---HHHHHTCS--TTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCC
T ss_pred CCHHHHH---HHHHhccC--CCCcCHHHHHHHHhcc--cCCHHHHHHHHHhhccCCCCcCcHHHHHHHHHHhhcccccCC
Confidence 4455544 44555544 4569999998766532 24677899999999999999999999988876543 2356
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHH
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALK 472 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~ 472 (520)
.+.++.+|+.+|.|+||.|+++||..+++
T Consensus 78 ~~~~~~l~~~~D~d~dG~I~~~EF~~~m~ 106 (107)
T d2pvba_ 78 DAETKAFLADGDKDGDGMIGVDEFAAMIK 106 (107)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 78899999999999999999999998875
|
| >d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Kchip1, Kv4 potassium channel-interacting protein species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.10 E-value=9.2e-11 Score=101.03 Aligned_cols=104 Identities=19% Similarity=0.273 Sum_probs=86.4
Q ss_pred CCCHHHHHHHHHHh-cCCCCCceehhhhHHHhhccchh-hhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHH
Q 010013 405 RLSESEVRQLMEAA-DVDGNGTIDYIEFITATMHMNRV-EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKT 481 (520)
Q Consensus 405 ~~~~~~~~~~~~~~-d~~~~g~i~~~ef~~~~~~~~~~-~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~ 481 (520)
..++.|++.+++.+ +.+++|.|+.+||..++...... .....+..+|+.+|.|++|.|+.+||..++..+... .++.
T Consensus 9 ~ft~~ei~~l~~~F~~~~~~G~is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~~~~g~I~~~EFl~~~~~~~~~~~~~~ 88 (178)
T d1s6ca_ 9 NFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEK 88 (178)
T ss_dssp SCCHHHHHHHHHHHHHHCTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCHHHH
T ss_pred CCCHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHHhccchHHH
Confidence 35889999999887 67789999999999987654333 345556889999999999999999999888765444 5677
Q ss_pred HHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 482 IKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 482 ~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
++.+|+.+|.|++|.|+++|+..++..
T Consensus 89 ~~~~f~~~D~~~~g~i~~~e~~~~~~~ 115 (178)
T d1s6ca_ 89 LRWTFNLYDINKDGYINKEEMMDIVKA 115 (178)
T ss_dssp HHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred HHHHHHhhccCCCCeecHHHHHHHHHH
Confidence 999999999999999999999887653
|
| >d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin regulatory subunit (B-chain) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.09 E-value=2.1e-10 Score=97.34 Aligned_cols=101 Identities=23% Similarity=0.373 Sum_probs=84.0
Q ss_pred HHHHhcccCCCCCCcccHHHHhhhhhhcCCCC-CHHHHHHHHHHhcCCCCCceehhhhHHHhhcc-----chhhhHHHHH
Q 010013 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRL-SESEVRQLMEAADVDGNGTIDYIEFITATMHM-----NRVEREEHLY 448 (520)
Q Consensus 375 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~-----~~~~~~~~~~ 448 (520)
+.++|..+|.+++|.|+.+||..++....... ....+..+|..+|.|++|.|+.+|+..++... ........+.
T Consensus 50 ~~~l~~~~d~~~~g~i~~~EFl~~~~~~~~~~~~~~~~~~~f~~~d~d~~g~Is~~el~~~l~~~~~~~~~~~~~~~~~~ 129 (165)
T d1auib_ 50 VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVD 129 (165)
T ss_dssp HHHHHHHHCTTCSSSEEHHHHHHHHGGGCTTCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHTTSSCHHHHHHHHH
T ss_pred HHHHHHHHccccchhhhhhhhhhhccccccchhhHHHHHHHHHHhcccccccccHHHHHHHHHHhccccCchHHHHHHHH
Confidence 45688899999999999999999888765443 44569999999999999999999999876532 2234466788
Q ss_pred HHHhhhcCCCCCceeHHHHHHHHHhcC
Q 010013 449 KAFEYFDKDNSGYITMEELEHALKKYN 475 (520)
Q Consensus 449 ~~F~~~D~d~dG~I~~~El~~~l~~~~ 475 (520)
.+|..+|.|+||.||.+||.+++..+.
T Consensus 130 ~~~~~~D~~~dG~Is~~EF~~i~~~~~ 156 (165)
T d1auib_ 130 KTIINADKDGDGRISFEEFCAVVGGLD 156 (165)
T ss_dssp HHHHHHCTTSSSSEEHHHHHHHHGGGC
T ss_pred HHHHHcCCCCCCcEeHHHHHHHHhcCC
Confidence 999999999999999999999997543
|
| >d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.07 E-value=4.4e-11 Score=86.90 Aligned_cols=66 Identities=23% Similarity=0.516 Sum_probs=56.2
Q ss_pred hHHHHHHHHhhhcC--CCCCceeHHHHHHHHHhc--CCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 443 REEHLYKAFEYFDK--DNSGYITMEELEHALKKY--NMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 443 ~~~~~~~~F~~~D~--d~dG~I~~~El~~~l~~~--~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..+.++.+|+.||. ++.|+|+.+||+.+++.. +.. ++++++++|..+|.|+||.|+|+||+.+|.+
T Consensus 5 ~~~~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~~~~~~~v~~~~~~~D~d~dG~Idf~EF~~l~~~ 75 (78)
T d1cb1a_ 5 SPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKK 75 (78)
T ss_dssp CHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHH
T ss_pred hHHHHHHHHHHHccCCCCCCEECHHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence 45689999999975 345899999999999886 333 5567999999999999999999999999875
|
| >d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Reps1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.07 E-value=1.1e-10 Score=88.07 Aligned_cols=68 Identities=25% Similarity=0.298 Sum_probs=62.8
Q ss_pred hhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhh
Q 010013 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (520)
Q Consensus 367 ~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 436 (520)
+++++.+++.++|+.+|.|++|+|+.+|+..++...+ ++..+++.++..+|.|++|.|+|+||..++.
T Consensus 3 ls~ee~~~y~~~F~~~D~d~~G~i~~~e~~~~l~~~~--l~~~~l~~i~~~~D~d~dG~l~~~EF~~a~~ 70 (92)
T d1fi6a_ 3 ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSK--LPILELSHIWELSDFDKDGALTLDEFCAAFH 70 (92)
T ss_dssp CCHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHS--SCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHHcc--CCHHHHHHHHHHhCCCCCCeecHHHHHHHHH
Confidence 5788999999999999999999999999999999876 6788999999999999999999999987654
|
| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]
Probab=99.07 E-value=1.6e-10 Score=87.21 Aligned_cols=65 Identities=25% Similarity=0.453 Sum_probs=56.5
Q ss_pred HHHHHHHHhhh-cCCCC-CceeHHHHHHHHHhcCC-----C-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 444 EEHLYKAFEYF-DKDNS-GYITMEELEHALKKYNM-----G-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 444 ~~~~~~~F~~~-D~d~d-G~I~~~El~~~l~~~~~-----~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
-+.+..+|..| |+||+ |+|+.+||+.+|...+. . +++.++++|..+|.|+||.|+|+||+.+|..
T Consensus 8 i~~l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~Idf~EF~~lm~~ 80 (93)
T d1zfsa1 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA 80 (93)
T ss_dssp HHHHHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTTTCCSEECSHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCEecHHHHHHHHHHhcccccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence 36788899998 88875 99999999999987542 2 6788999999999999999999999998854
|
| >d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Nucleobindin 1 (CALNUC) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.06 E-value=9.7e-11 Score=89.77 Aligned_cols=62 Identities=23% Similarity=0.303 Sum_probs=51.1
Q ss_pred HHHHHhhhcCCCCCceeHHHHHHHHHhcCC----C-------------CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 447 LYKAFEYFDKDNSGYITMEELEHALKKYNM----G-------------DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 447 ~~~~F~~~D~d~dG~I~~~El~~~l~~~~~----~-------------~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
++.+|+.||.|+||+|+.+||..++...+. . .+..++.+|..+|.|+||.|||+||++.+++
T Consensus 18 ~r~~F~~~D~DgdG~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~DG~Is~~EF~~~~~~ 96 (99)
T d1snla_ 18 PKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQR 96 (99)
T ss_dssp HHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHHC
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHHHHHhcchhhhhhhhhhhhHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHhc
Confidence 678899999999999999999988865321 0 1235788999999999999999999999876
|
| >d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.05 E-value=2.7e-10 Score=96.36 Aligned_cols=100 Identities=26% Similarity=0.365 Sum_probs=85.1
Q ss_pred HHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcC----CC-CHHHHHH
Q 010013 410 EVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYN----MG-DAKTIKE 484 (520)
Q Consensus 410 ~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~----~~-~~~~~~~ 484 (520)
+++++|..+|.|++|.|+++||..++...........+..+|..+|.+++|.++..|+...+.... .. ..+.+..
T Consensus 21 el~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 100 (162)
T d1topa_ 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAN 100 (162)
T ss_dssp HHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCeEcHHHHHHHHhccCCchhHHHHHhhhheeccCCCCCeeeehhhhhhhhhhhhhcccCcHHHHHH
Confidence 477899999999999999999999888777777788999999999999999999999876554221 11 3456788
Q ss_pred HHHHhcCCCCcceeHHHHHHHHHcC
Q 010013 485 IIAEVDIDNDGRINYEEFAAMMRKG 509 (520)
Q Consensus 485 ~~~~~d~~~dg~i~~~ef~~~l~~~ 509 (520)
+|+.+|.|++|.|+.+||..++...
T Consensus 101 aF~~~D~d~~G~Is~~e~~~~l~~~ 125 (162)
T d1topa_ 101 CFRIFDKNADGFIDIEELGEILRAT 125 (162)
T ss_dssp HHHHHCTTCSSCBCHHHHHHHHHTT
T ss_pred HHHHHCCCCCCCCcHHHHHHHHHhh
Confidence 9999999999999999999999863
|
| >d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.05 E-value=1.8e-10 Score=87.31 Aligned_cols=62 Identities=19% Similarity=0.327 Sum_probs=55.8
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcceeHHHHHHHH
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMM 506 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~l 506 (520)
...++.+|+.+|+|++|+|+.+|++.++...+. +.+++.++++.+|.|+||.|+++||+.+|
T Consensus 9 ~~~~~~~F~~~D~d~~G~is~~e~~~~l~~~~l-~~~~l~~i~~~~D~d~dG~l~~~EF~~am 70 (95)
T d1c07a_ 9 KAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGL-PSTLLAHIWSLCDTKDCGKLSKDQFALAF 70 (95)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHTTTC-CHHHHHHHHHHHCTTCSSSEETTTHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCcHHHHHHHHHhcCC-CHHHHHHHHHHhCCCCCCeEcHHHHHHHH
Confidence 456789999999999999999999999998775 56789999999999999999999998655
|
| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a4 [TaxId: 9606]
Probab=99.05 E-value=3.3e-10 Score=84.99 Aligned_cols=66 Identities=14% Similarity=0.392 Sum_probs=55.9
Q ss_pred hHHHHHHHHhhh-cCCCCC-ceeHHHHHHHHHhc-----CCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 443 REEHLYKAFEYF-DKDNSG-YITMEELEHALKKY-----NMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 443 ~~~~~~~~F~~~-D~d~dG-~I~~~El~~~l~~~-----~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..+.+..+|+.| |.|++| +|+.+||+.+|+.. +.. ++++++++|..+|.|+||.|+|+||+.+|..
T Consensus 7 ~i~~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D~n~DG~I~F~EF~~lm~~ 80 (93)
T d3c1va1 7 ALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC 80 (93)
T ss_dssp HHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhccccCCCHHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Confidence 345788999998 666654 79999999999863 333 7889999999999999999999999998865
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Probab=99.04 E-value=8e-11 Score=88.28 Aligned_cols=64 Identities=25% Similarity=0.488 Sum_probs=55.0
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHhcC-----CC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYN-----MG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~-----~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
-+.+..+|+.||.| +|+||.+||+.++.... .. ++..++++|..+|.|+||+|+|+||..+|..
T Consensus 8 ie~l~~~F~~yd~d-dG~is~~El~~~l~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~ 77 (92)
T d1a4pa_ 8 METMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAG 77 (92)
T ss_dssp HHHHHHHHHHHHGG-GCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC-CCEEcHHHHHHHHHHhccccccccCCHHHHHHHHHHHhCCCCCCCcHHHHHHHHHH
Confidence 46789999999987 89999999999997632 22 5567999999999999999999999998854
|
| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a13 [TaxId: 9606]
Probab=99.03 E-value=1.4e-10 Score=87.98 Aligned_cols=65 Identities=14% Similarity=0.361 Sum_probs=55.3
Q ss_pred HHHHHHHHhhh-cCCCC-CceeHHHHHHHHHhcCCC---CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 444 EEHLYKAFEYF-DKDNS-GYITMEELEHALKKYNMG---DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 444 ~~~~~~~F~~~-D~d~d-G~I~~~El~~~l~~~~~~---~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
-+.+..+|..| |.||+ |+||.+||+.+++..+.. +.+.++++|..+|.|+||.|+|+||+.+|..
T Consensus 13 i~~l~~vF~~y~d~dg~~g~is~~El~~~l~~~~~~~~~~~~~v~~l~~~~D~d~DG~IdF~EF~~l~~~ 82 (98)
T d1yuta1 13 IETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGE 82 (98)
T ss_dssp HHHHHHHHHHHHTTSSSSSCBCHHHHHHHHHHHCTTTTCCSSCHHHHHHHHCTTCCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCEEcHHHHHHHHHHhccccCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 35678889888 77875 999999999999875432 5567999999999999999999999999864
|
| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a3 [TaxId: 9606]
Probab=99.02 E-value=3.7e-10 Score=84.46 Aligned_cols=65 Identities=12% Similarity=0.226 Sum_probs=56.0
Q ss_pred HHHHHHHHhhh-cCCCCC-ceeHHHHHHHHHhcC-----CC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 444 EEHLYKAFEYF-DKDNSG-YITMEELEHALKKYN-----MG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 444 ~~~~~~~F~~~-D~d~dG-~I~~~El~~~l~~~~-----~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
-+.+..+|..| |++|+| +|+.+||+++|+... .. ++..++++++.+|.|+||.|+|+||+.+|..
T Consensus 8 i~~i~~vF~kya~~dGd~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~n~Dg~IdF~EF~~l~~~ 80 (93)
T d1ksoa_ 8 VAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLAC 80 (93)
T ss_dssp HHHHHHHHHHHHTSSSCTTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHTTTCEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcCCCCCeECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence 35677889988 999999 599999999998642 22 6788999999999999999999999998864
|
| >d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=99.02 E-value=1.3e-10 Score=100.28 Aligned_cols=99 Identities=21% Similarity=0.280 Sum_probs=87.9
Q ss_pred HHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHH
Q 010013 410 EVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAE 488 (520)
Q Consensus 410 ~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~ 488 (520)
+++++|..+|.|++|.|+++||..++.......+...+..+|+.+|.+++|.|+..+|..++...... ..+.+..+|..
T Consensus 11 ~l~~~F~~~D~d~dG~Is~~e~~~~l~~l~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~e~l~~aF~~ 90 (182)
T d1s6ia_ 11 GLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREENLVSAFSY 90 (182)
T ss_dssp SHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCCCSTHHHHHH
T ss_pred HHHHHHHHHcCCCcCCCCHHHHHHHHHHcCCccccccchhhhhhhhccccccchHHHHHHHHHhhcccccHHHHHHHHHH
Confidence 47889999999999999999999998887777788899999999999999999999999877655443 55578999999
Q ss_pred hcCCCCcceeHHHHHHHHHc
Q 010013 489 VDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 489 ~d~~~dg~i~~~ef~~~l~~ 508 (520)
+|.+++|.|+.+||..++..
T Consensus 91 ~D~d~~G~i~~~el~~~l~~ 110 (182)
T d1s6ia_ 91 FDKDGSGYITLDEIQQACKD 110 (182)
T ss_dssp TTTTCSSEEEHHHHHHTTTT
T ss_pred HhhcCCCccchhhhhhhhhh
Confidence 99999999999999998865
|
| >d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.00 E-value=5.1e-10 Score=93.96 Aligned_cols=100 Identities=27% Similarity=0.372 Sum_probs=80.9
Q ss_pred hhHHHHhcccCCCCCCcccHHHHhhhhhhc----CCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHH
Q 010013 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKL----GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLY 448 (520)
Q Consensus 373 ~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~----~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~ 448 (520)
.++.+++..++.+++|.++..++....... ......+++..+|..+|.+++|.|+.+||..++.......+.+++.
T Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~e~~~~~~~~~~~ls~~e~~ 130 (156)
T d1dtla_ 51 EELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIE 130 (156)
T ss_dssp HHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHH
T ss_pred HHHHHHHHHhhccCCCccchhhhhhhhhhcccccccccHHHHHHHHHHHhCcCCCCcCcHHHHHHHHhhcCCCCCHHHHH
Confidence 345677788899999999999887655432 2234556788999999999999999999998888777777888999
Q ss_pred HHHhhhcCCCCCceeHHHHHHHHH
Q 010013 449 KAFEYFDKDNSGYITMEELEHALK 472 (520)
Q Consensus 449 ~~F~~~D~d~dG~I~~~El~~~l~ 472 (520)
.+|+.+|.|+||.|+.+||.++|+
T Consensus 131 ~i~~~~D~d~dG~I~~~eF~~~l~ 154 (156)
T d1dtla_ 131 ELMKDGDKNNDGRIDYDEFLEFMK 154 (156)
T ss_dssp HHHHHHCTTSSSEEEHHHHHHHHH
T ss_pred HHHHHhCCCCCCeEeHHHHHHHHc
Confidence 999999999999999999999886
|
| >d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Reps1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.00 E-value=6.7e-10 Score=83.54 Aligned_cols=62 Identities=21% Similarity=0.364 Sum_probs=55.7
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcceeHHHHHHHH
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMM 506 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~l 506 (520)
....+.+|+.+|+|++|+|+.+|++.++...+. +..++..+++.+|.|+||.|+++||+.+|
T Consensus 8 ~~~y~~~F~~~D~d~~G~i~~~e~~~~l~~~~l-~~~~l~~i~~~~D~d~dG~l~~~EF~~a~ 69 (92)
T d1fi6a_ 8 RQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKL-PILELSHIWELSDFDKDGALTLDEFCAAF 69 (92)
T ss_dssp HHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHSS-CHHHHHHHHHHHCTTCSSEEEHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcccchhHHHHHHHHHHccC-CHHHHHHHHHHhCCCCCCeecHHHHHHHH
Confidence 346788999999999999999999999998876 56789999999999999999999998644
|
| >d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Cdc4p species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=98.99 E-value=4.4e-10 Score=92.39 Aligned_cols=96 Identities=17% Similarity=0.154 Sum_probs=81.0
Q ss_pred HHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCC---C-CHHHHHH
Q 010013 409 SEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNM---G-DAKTIKE 484 (520)
Q Consensus 409 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~---~-~~~~~~~ 484 (520)
.+.+++|..+|.|++|.|++.||..++..++...+.+.+. .+|.+++|.|+.+||..++..... . ..+++.+
T Consensus 5 ~~fke~F~~~D~d~dG~I~~~el~~~l~~lg~~~t~~ei~----~~~~~~~~~i~~~eF~~~~~~~~~~~~~~~~~~l~~ 80 (140)
T d1ggwa_ 5 SPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEIT----EIESTLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVK 80 (140)
T ss_dssp TTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHH----HHHTTSCSSEEHHHHHHHHCTTSSSSSSCCHHHHHH
T ss_pred HHHHHHHHHHCCCCCCeECHHHHHHHHHHHHhhhHHHhhh----hhhccccccccchhhhhhhhhhhhcchhhHHHHHHH
Confidence 4568899999999999999999999888776666666654 457889999999999999865322 1 5678999
Q ss_pred HHHHhcCCCCcceeHHHHHHHHHc
Q 010013 485 IIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 485 ~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
+|+.+|.+++|.|+.+||..+|..
T Consensus 81 aF~~~D~d~~G~I~~~el~~~l~~ 104 (140)
T d1ggwa_ 81 GFQVFDKDATGMIGVGELRYVLTS 104 (140)
T ss_dssp HHHTTCSSCSSCCCHHHHHHHHHH
T ss_pred HHHHHhccCCCcchHHHHHHHHHH
Confidence 999999999999999999999975
|
| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.99 E-value=1e-10 Score=84.76 Aligned_cols=65 Identities=26% Similarity=0.471 Sum_probs=54.3
Q ss_pred hhHHHHhcccCCC--CCCcccHHHHhhhhhhcCCCCC--HHHHHHHHHHhcCCCCCceehhhhHHHhhc
Q 010013 373 MGLKEMFKSMDTD--NSGTITFEELKAGLPKLGTRLS--ESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (520)
Q Consensus 373 ~~l~~~F~~~D~~--~~g~i~~~e~~~~l~~~~~~~~--~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 437 (520)
+++.++|+.||.+ ++|+|+.+||..+|..+|..++ ..+++.++..+|.|++|.|+|+||+.++..
T Consensus 5 eel~~~F~~fd~~~~~~G~I~~~El~~~l~~lg~~~~~~~~ei~~~~~~~D~d~dG~I~f~EF~~~m~~ 73 (76)
T d1qx2a_ 5 EEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKK 73 (76)
T ss_dssp HHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCEECHHHHHHHHHHhCCcCCCCHHHHHHHHHHhhcCCCCcCcHHHHHHHHHH
Confidence 4577888888654 5799999999999999887654 347999999999999999999999987753
|
| >d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=98.98 E-value=9.5e-10 Score=91.76 Aligned_cols=98 Identities=16% Similarity=0.224 Sum_probs=82.1
Q ss_pred HHHHHHHHhcC--CCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcC-C--CCHHHHHH
Q 010013 410 EVRQLMEAADV--DGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYN-M--GDAKTIKE 484 (520)
Q Consensus 410 ~~~~~~~~~d~--~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~-~--~~~~~~~~ 484 (520)
+++++|..+|. |++|.|+..||..++..++...+..++..+ ...|.+++|.|+.+||..++.... . ...+++.+
T Consensus 8 ~l~~~F~~fD~~~~~dG~I~~~el~~~l~~lG~~~t~~e~~~~-~~~~~~~~~~i~~~eFl~~~~~~~~~~~~~~~~l~~ 86 (152)
T d1wdcc_ 8 DLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYME 86 (152)
T ss_dssp HHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTSCCCCHHHHHH
T ss_pred HHHHHHHHHCcCCCCCCeECHHHHHHHHHHhccCccHhhhhhh-hhhhccccccccccccccccccccccchhHHHhhhh
Confidence 46778999984 889999999999998877666677777665 446888999999999999886542 2 26778999
Q ss_pred HHHHhcCCCCcceeHHHHHHHHHc
Q 010013 485 IIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 485 ~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
+|+.+|.+++|.|+.+||..+|..
T Consensus 87 aF~~~D~~~~G~I~~~el~~~l~~ 110 (152)
T d1wdcc_ 87 AFKTFDREGQGFISGAELRHVLTA 110 (152)
T ss_dssp HHHTTCSSSSSEEEHHHHHHHHHH
T ss_pred hhhccccccCccchHHHHHHHHHH
Confidence 999999999999999999999976
|
| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]
Probab=98.98 E-value=3.3e-10 Score=85.43 Aligned_cols=70 Identities=21% Similarity=0.367 Sum_probs=59.9
Q ss_pred HHHHhhHHHHhccc-CCCCC-CcccHHHHhhhhhhcC-----CCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc
Q 010013 369 EEEIMGLKEMFKSM-DTDNS-GTITFEELKAGLPKLG-----TRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (520)
Q Consensus 369 ~~~~~~l~~~F~~~-D~~~~-g~i~~~e~~~~l~~~~-----~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 438 (520)
+..+..+.++|+.+ |.||+ |+|+.+||+.+|...+ ...++++++.+|+.+|.|+||.|+|+||+.++...
T Consensus 5 E~~i~~l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~Idf~EF~~lm~~l 81 (93)
T d1zfsa1 5 ETAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL 81 (93)
T ss_dssp HHHHHHHHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTTTCCSEECSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccCCCCCEecHHHHHHHHHHhcccccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 34567899999988 88875 9999999999998764 34678999999999999999999999999987643
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Probab=98.97 E-value=1.9e-10 Score=86.16 Aligned_cols=69 Identities=19% Similarity=0.303 Sum_probs=58.9
Q ss_pred HHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhc-----CCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc
Q 010013 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL-----GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (520)
Q Consensus 369 ~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~-----~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 438 (520)
+..+..+..+|+.+|.| +|+|+.+||..++... +...+...++.+|..+|.|+||+|+|+||..++...
T Consensus 5 E~~ie~l~~~F~~yd~d-dG~is~~El~~~l~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~l 78 (92)
T d1a4pa_ 5 EHAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGL 78 (92)
T ss_dssp HHHHHHHHHHHHHHHGG-GCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC-CCEEcHHHHHHHHHHhccccccccCCHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHH
Confidence 35677899999999987 8999999999999763 334566789999999999999999999999887654
|
| >d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a6 [TaxId: 9606]
Probab=98.97 E-value=4e-10 Score=83.50 Aligned_cols=65 Identities=15% Similarity=0.393 Sum_probs=56.2
Q ss_pred HHHHHHHHhhh-cCCCCC-ceeHHHHHHHHHh---cCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 444 EEHLYKAFEYF-DKDNSG-YITMEELEHALKK---YNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 444 ~~~~~~~F~~~-D~d~dG-~I~~~El~~~l~~---~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
-..+..+|..| |+|++| .|+..||+.+++. .+.. +++.++++++.+|.|+||.|+|+||+.+|..
T Consensus 8 i~~ii~vF~kya~~dg~~~~ls~~Elk~Ll~~e~~~~~~~~~~~~~~~~~~lD~d~Dg~IdF~EF~~l~~~ 78 (89)
T d1k8ua_ 8 IGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGA 78 (89)
T ss_dssp HHHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCeecHHHHHHHHHHHHHhhccCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence 35678899988 999999 6999999999986 3333 6678999999999999999999999999864
|
| >d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.94 E-value=3.5e-10 Score=92.99 Aligned_cols=99 Identities=15% Similarity=0.167 Sum_probs=84.1
Q ss_pred HHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcC--CCCCceeHHHHHHHHHhcCCC----CHHHHH
Q 010013 410 EVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDK--DNSGYITMEELEHALKKYNMG----DAKTIK 483 (520)
Q Consensus 410 ~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~--d~dG~I~~~El~~~l~~~~~~----~~~~~~ 483 (520)
|++++|..+|.+++|.|+..|+..++..+....+..++..++..++. +++|.|+..||..++...... ..+++.
T Consensus 1 e~ke~F~~~D~d~~G~I~~~el~~~l~~lg~~~t~~e~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~l~ 80 (139)
T d1w7jb1 1 EFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYEDYL 80 (139)
T ss_dssp CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--------CCH
T ss_pred CHHHHHHHHhCCCCCeECHHHHHHHHHHhccCCCHHHHHHHHHHHhcccccCCceeeeccchhhHhhhhhccccHHHHHH
Confidence 46789999999999999999999998887777888889999888764 689999999999988764332 345588
Q ss_pred HHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 484 EIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 484 ~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
++|+.+|.+++|.|+.+||..++++
T Consensus 81 ~aF~~~D~d~~G~I~~~el~~~l~~ 105 (139)
T d1w7jb1 81 EGFRVFDKEGNGKVMGAELRHVLTT 105 (139)
T ss_dssp HHHHTTCTTSSSEEEHHHHHHHHHH
T ss_pred HhhhhccCCCCCeEeHHHHHHHHHH
Confidence 8999999999999999999999987
|
| >d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.93 E-value=6.3e-10 Score=84.03 Aligned_cols=67 Identities=22% Similarity=0.339 Sum_probs=61.1
Q ss_pred hhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhh
Q 010013 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (520)
Q Consensus 367 ~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 436 (520)
+++++..++.++|..+| +++|+|+.+|+..++...| ++.++++.++..+|.|++|.|+++||..++.
T Consensus 4 ls~ee~~~y~~~F~~~D-~~~G~i~~~el~~~l~~~g--l~~~~L~~Iw~~~D~~~dG~l~~~EF~~a~~ 70 (95)
T d2jxca1 4 VKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLNSK--LPVDILGRVWELSDIDHDGMLDRDEFAVAMF 70 (95)
T ss_dssp SCHHHHHHHHHHHHHTC-CBTTEEEHHHHHHHHTTSS--CCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhC-CCCCceeHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCeEcHHHHHHHHH
Confidence 67889999999999999 8999999999999998876 5788999999999999999999999987654
|
| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a4 [TaxId: 9606]
Probab=98.92 E-value=1.1e-09 Score=82.18 Aligned_cols=70 Identities=21% Similarity=0.369 Sum_probs=59.2
Q ss_pred HHHHhhHHHHhccc-CCCCCC-cccHHHHhhhhhh-----cCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc
Q 010013 369 EEEIMGLKEMFKSM-DTDNSG-TITFEELKAGLPK-----LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (520)
Q Consensus 369 ~~~~~~l~~~F~~~-D~~~~g-~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 438 (520)
+..+..+.++|+.+ |.|++| +|+.+||+.++.. ++...++++++++|+.+|.|+||.|+|+||+.++...
T Consensus 5 E~~i~~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D~n~DG~I~F~EF~~lm~~l 81 (93)
T d3c1va1 5 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI 81 (93)
T ss_dssp HHHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhccccCCCHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHH
Confidence 34567899999998 666655 7999999999976 4556788999999999999999999999999987643
|
| >d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.92 E-value=8.3e-11 Score=85.37 Aligned_cols=68 Identities=19% Similarity=0.320 Sum_probs=56.5
Q ss_pred HHHhhHHHHhcccCC--CCCCcccHHHHhhhhhhc--CCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhc
Q 010013 370 EEIMGLKEMFKSMDT--DNSGTITFEELKAGLPKL--GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (520)
Q Consensus 370 ~~~~~l~~~F~~~D~--~~~g~i~~~e~~~~l~~~--~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 437 (520)
..+.+|..+|+.||. +++|+|+.+||+.++..+ +...+.++++.++..+|.|+||.|+|+||+.++..
T Consensus 4 ~~~~~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~~~~~~~v~~~~~~~D~d~dG~Idf~EF~~l~~~ 75 (78)
T d1cb1a_ 4 KSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKK 75 (78)
T ss_dssp CCHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHccCCCCCCEECHHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence 346678999999975 345899999999999887 34456667999999999999999999999988754
|
| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a13 [TaxId: 9606]
Probab=98.91 E-value=4.4e-10 Score=85.25 Aligned_cols=69 Identities=13% Similarity=0.223 Sum_probs=58.4
Q ss_pred HHHhhHHHHhccc-CCCCC-CcccHHHHhhhhhhcCC--CCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc
Q 010013 370 EEIMGLKEMFKSM-DTDNS-GTITFEELKAGLPKLGT--RLSESEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (520)
Q Consensus 370 ~~~~~l~~~F~~~-D~~~~-g~i~~~e~~~~l~~~~~--~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 438 (520)
..+..+.++|+.| |.+++ |+|+..||+.++...+. ..+.++++.+|..+|.|+||.|+|+||+.++...
T Consensus 11 ~~i~~l~~vF~~y~d~dg~~g~is~~El~~~l~~~~~~~~~~~~~v~~l~~~~D~d~DG~IdF~EF~~l~~~l 83 (98)
T d1yuta1 11 ESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGEL 83 (98)
T ss_dssp HHHHHHHHHHHHHHTTSSSSSCBCHHHHHHHHHHHCTTTTCCSSCHHHHHHHHCTTCCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCCCEEcHHHHHHHHHHhccccCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 4567899999988 77775 99999999999988643 3456679999999999999999999999987654
|
| >d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]
Probab=98.90 E-value=6.3e-10 Score=82.17 Aligned_cols=64 Identities=19% Similarity=0.295 Sum_probs=54.6
Q ss_pred HHHHHHHhhh-cCCCCCce-eHHHHHHHHHh-cCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 445 EHLYKAFEYF-DKDNSGYI-TMEELEHALKK-YNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 445 ~~~~~~F~~~-D~d~dG~I-~~~El~~~l~~-~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
+.+..+|+.| |+||+|.+ +.+||+.++.. ++.. +...+++++..+|.|+||+|+|+||+.+|..
T Consensus 10 ~~ii~~F~kya~~dG~~~~l~~~Elk~ll~~e~~~~~~~~~v~~i~~~~D~n~DG~IdF~EF~~l~~~ 77 (87)
T d1xk4a1 10 NSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIK 77 (87)
T ss_dssp HHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCccCHHHHHHHHHHhcCCccchHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 4677888888 99999965 99999999975 5544 5567999999999999999999999999864
|
| >d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Light Chain Mlc1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.89 E-value=1.4e-09 Score=90.06 Aligned_cols=97 Identities=8% Similarity=0.161 Sum_probs=79.9
Q ss_pred HHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHh-hhcCCCCCceeHHHHHHHHHhc-------CCCCHHHHH
Q 010013 412 RQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE-YFDKDNSGYITMEELEHALKKY-------NMGDAKTIK 483 (520)
Q Consensus 412 ~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~-~~D~d~dG~I~~~El~~~l~~~-------~~~~~~~~~ 483 (520)
+.+|..+|.|++|.|+.+||..++..++...+.+++..++. ..+.+.+|.|+.+||..++... .....+++.
T Consensus 5 k~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~ei~~l~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~~~~l~ 84 (146)
T d1m45a_ 5 KDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTEDFV 84 (146)
T ss_dssp TTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTHHHH
T ss_pred HHHHHHHcCCCcCCCCHHHHHHHHHHcCCchhHHHHhhhhccccccccccccccchhhhhhhhhcccccccccchHHHHH
Confidence 46899999999999999999999887766677888888886 5567788999999999988532 122456799
Q ss_pred HHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 484 EIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 484 ~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
++|..+|.+++|.|+.+||..+|.+
T Consensus 85 ~~F~~~D~~~~G~I~~~el~~~l~~ 109 (146)
T d1m45a_ 85 KAFQVFDKESTGKVSVGDLRYMLTG 109 (146)
T ss_dssp HHHHTTCSSSSSEEEHHHHHHHHHH
T ss_pred HHHHhhccccccccchhhhhhhhcc
Confidence 9999999999999999999999986
|
| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a3 [TaxId: 9606]
Probab=98.88 E-value=1e-09 Score=81.95 Aligned_cols=69 Identities=19% Similarity=0.330 Sum_probs=59.6
Q ss_pred HHHHhhHHHHhccc-CCCCCC-cccHHHHhhhhhhc-----CCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhc
Q 010013 369 EEEIMGLKEMFKSM-DTDNSG-TITFEELKAGLPKL-----GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (520)
Q Consensus 369 ~~~~~~l~~~F~~~-D~~~~g-~i~~~e~~~~l~~~-----~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 437 (520)
+..+..+..+|+.+ |.+|+| +|+.+||++++... +...+.+++..+++.+|.|+||.|+|+||+.++..
T Consensus 5 E~~i~~i~~vF~kya~~dGd~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~n~Dg~IdF~EF~~l~~~ 80 (93)
T d1ksoa_ 5 EQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLAC 80 (93)
T ss_dssp HHHHHHHHHHHHHHHTSSSCTTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHTTTCEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCcCCCCCeECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence 45677889999987 999999 59999999999764 34457889999999999999999999999987764
|
| >d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.88 E-value=1.4e-09 Score=89.92 Aligned_cols=96 Identities=16% Similarity=0.235 Sum_probs=77.6
Q ss_pred HHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCC-C-CHHHHHHHHH
Q 010013 410 EVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNM-G-DAKTIKEIIA 487 (520)
Q Consensus 410 ~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~-~-~~~~~~~~~~ 487 (520)
+++++|..+|.+++|+|+.+||..++..+....+... .+..++.+++|.|+..||..++..... . ..+++..+|+
T Consensus 8 el~e~F~~~D~~~~G~I~~~e~~~~l~~lg~~~~~~~---~~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~aF~ 84 (145)
T d2mysb_ 8 DFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNE---ELDAMIKEASGPINFTVFLTMFGEKLKGADPEDVIMGAFK 84 (145)
T ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCcchHH---HHHHHHHhccCceeechhhhhhhhcccccchHHHHHHHHH
Confidence 4677899999999999999999998876553333322 344566788999999999998865433 2 5667999999
Q ss_pred HhcCCCCcceeHHHHHHHHHc
Q 010013 488 EVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 488 ~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.+|.+++|.|+.+||.++|+.
T Consensus 85 ~fD~~~~g~I~~~el~~~l~~ 105 (145)
T d2mysb_ 85 VLDPDGKGSIKKSFLEELLTT 105 (145)
T ss_pred hhhhcccchhhHHHHHHHHHH
Confidence 999999999999999999976
|
| >d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.87 E-value=2.9e-09 Score=80.23 Aligned_cols=63 Identities=19% Similarity=0.377 Sum_probs=55.2
Q ss_pred hHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcceeHHHHHHHHH
Q 010013 443 REEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507 (520)
Q Consensus 443 ~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~ 507 (520)
.....+.+|+.+| +++|+|+.+|++.+|...|. +.+++.++++.+|.|+||.|+++||+.+|.
T Consensus 8 e~~~y~~~F~~~D-~~~G~i~~~el~~~l~~~gl-~~~~L~~Iw~~~D~~~dG~l~~~EF~~a~~ 70 (95)
T d2jxca1 8 DKAKYDAIFDSLS-PVNGFLSGDKVKPVLLNSKL-PVDILGRVWELSDIDHDGMLDRDEFAVAMF 70 (95)
T ss_dssp HHHHHHHHHHHTC-CBTTEEEHHHHHHHHTTSSC-CHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-CCCCceeHHHHHHHHHHcCC-CHHHHHHHHHHhcCCCCCeEcHHHHHHHHH
Confidence 3456889999999 89999999999999998776 567899999999999999999999976553
|
| >d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]
Probab=98.85 E-value=5.9e-09 Score=76.44 Aligned_cols=64 Identities=22% Similarity=0.378 Sum_probs=53.4
Q ss_pred HHHHHHHhhh-cCCCCC-ceeHHHHHHHHHhc-----CCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 445 EHLYKAFEYF-DKDNSG-YITMEELEHALKKY-----NMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 445 ~~~~~~F~~~-D~d~dG-~I~~~El~~~l~~~-----~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
+.+..+|..| +.++++ +|+.+||+.+++.. +.. +++.++++|+.+|.|+||.|+|+||+.+|..
T Consensus 8 ~~li~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD~n~Dg~idF~EF~~li~~ 79 (87)
T d1e8aa_ 8 EGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAI 79 (87)
T ss_dssp HHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCeEcHHHHHHHHHHHccccccCCCCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHH
Confidence 5678899988 556554 69999999999863 222 6788999999999999999999999999864
|
| >d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a6 [TaxId: 9606]
Probab=98.84 E-value=9.8e-10 Score=81.34 Aligned_cols=69 Identities=25% Similarity=0.443 Sum_probs=60.2
Q ss_pred HHHHhhHHHHhccc-CCCCCC-cccHHHHhhhhhh---cCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhc
Q 010013 369 EEEIMGLKEMFKSM-DTDNSG-TITFEELKAGLPK---LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (520)
Q Consensus 369 ~~~~~~l~~~F~~~-D~~~~g-~i~~~e~~~~l~~---~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 437 (520)
+..+..+..+|+.+ |++++| .|+..||+.++.. .+...+++++..+++.+|.|+||+|+|+||+.++..
T Consensus 5 E~ai~~ii~vF~kya~~dg~~~~ls~~Elk~Ll~~e~~~~~~~~~~~~~~~~~~lD~d~Dg~IdF~EF~~l~~~ 78 (89)
T d1k8ua_ 5 DQAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGA 78 (89)
T ss_dssp HHHHHHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccCCCCCeecHHHHHHHHHHHHHhhccCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence 45677889999988 999999 6999999999987 556667788999999999999999999999988754
|
| >d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=98.83 E-value=4.8e-09 Score=90.47 Aligned_cols=98 Identities=13% Similarity=0.226 Sum_probs=79.5
Q ss_pred HHHHhcccCCCCCCcccHHHHhhhhhhcC---------CCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHH
Q 010013 375 LKEMFKSMDTDNSGTITFEELKAGLPKLG---------TRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREE 445 (520)
Q Consensus 375 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~---------~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~ 445 (520)
...++...|.+++|.|+.+++...+.... .......+..+|..+|.|++|.|+.+||..++.... .+.+
T Consensus 62 ~~~~~~~~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~--l~~~ 139 (185)
T d2sasa_ 62 WRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ--LQCA 139 (185)
T ss_dssp HHHHHHHHCTTCSSCEEHHHHHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSC--CCCS
T ss_pred HHHHHHHhCcCCCCcEeeeHhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHccCCCccCCHHHHHHHHHHcC--CCHH
Confidence 34667788999999999999998775421 112234588999999999999999999999877543 3456
Q ss_pred HHHHHHhhhcCCCCCceeHHHHHHHHHhc
Q 010013 446 HLYKAFEYFDKDNSGYITMEELEHALKKY 474 (520)
Q Consensus 446 ~~~~~F~~~D~d~dG~I~~~El~~~l~~~ 474 (520)
.+..+|+.+|.|++|.|+.+||..++..+
T Consensus 140 ~~~~~f~~~D~d~dG~i~~~EF~~~~~~f 168 (185)
T d2sasa_ 140 DVPAVYNVITDGGKVTFDLNRYKELYYRL 168 (185)
T ss_dssp SHHHHHHHHHTTTTSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCCCcHHHHHHHHHHH
Confidence 78999999999999999999999888653
|
| >d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Pob1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.82 E-value=6e-10 Score=86.55 Aligned_cols=69 Identities=28% Similarity=0.288 Sum_probs=60.7
Q ss_pred hhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhh
Q 010013 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (520)
Q Consensus 366 ~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 436 (520)
.+++++.+++.++|+.+|+|++|+|+.+|+..+|...+ ++.++++.+++.+|.|++|.|+++||..++.
T Consensus 15 ~lt~ee~~~y~~lF~~~D~d~~G~Is~~e~~~~l~~s~--L~~~~L~~Iw~l~D~d~dG~l~~~EF~~am~ 83 (110)
T d1iq3a_ 15 RITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSK--LSIPELSYIWELSDADCDGALTLPEFCAAFH 83 (110)
T ss_dssp CCSSSSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSS--CSSCCHHHHHHHHCSSSCSEEEHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHhhc--cchHHHHHHHHHhccCCCCeECHHHHHHHHH
Confidence 36778888999999999999999999999999998766 5567799999999999999999999987664
|
| >d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.80 E-value=3.5e-09 Score=80.51 Aligned_cols=61 Identities=21% Similarity=0.287 Sum_probs=54.5
Q ss_pred HHHHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcceeHHHHHHHHH
Q 010013 446 HLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507 (520)
Q Consensus 446 ~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~ 507 (520)
..+.+|+.+|.|++|+|+.+|++.++...|. +.+++.++++.+|.|+||.|+++||+..|+
T Consensus 12 ~y~~~F~~~D~d~~G~i~~~e~~~~l~~s~L-~~~~L~~i~~~~D~d~dG~L~~~EF~~am~ 72 (99)
T d1qjta_ 12 VYEKYYRQVEAGNTGRVLALDAAAFLKKSGL-PDLILGKIWDLADTDGKGVLSKQEFFVALR 72 (99)
T ss_dssp HHHHHHHHHCCTTSSCCCSHHHHHHHHTSSS-CHHHHHHHHHHHCCSSSSSCCSHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcccHHHHHHHHHHcCC-cHHHHHHHHHHHcCCCCCccCHHHHHHHHH
Confidence 4567899999999999999999999998776 567899999999999999999999997774
|
| >d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]
Probab=98.79 E-value=1.7e-09 Score=82.52 Aligned_cols=63 Identities=14% Similarity=0.305 Sum_probs=51.9
Q ss_pred HHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC--------CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 445 EHLYKAFEYFDKDNSGYITMEELEHALKKYNMG--------DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 445 ~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~--------~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..+..+|..|| +++|.|+..||+.+|+..+.. ++..++++|..+|.|+||.|+|+||+.+|..
T Consensus 10 ~~l~~~F~~y~-~~dG~i~~~El~~ll~~~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~ 80 (100)
T d1psra_ 10 IGMIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGD 80 (100)
T ss_dssp HHHHHHHHHTC-CTTSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHc-CCCCcccHHHHHHHHHHHccccccccccCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHH
Confidence 34666777776 789999999999999875421 3346899999999999999999999998865
|
| >d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]
Probab=98.78 E-value=7.2e-09 Score=89.73 Aligned_cols=64 Identities=28% Similarity=0.339 Sum_probs=55.2
Q ss_pred hhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhh
Q 010013 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (520)
Q Consensus 373 ~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 436 (520)
..+..+|..+|.|++|+|+.+||..++..+|..++.++++.+|+.+|.|+||.|+|+||+..+.
T Consensus 107 ~~~~~~F~~~D~d~~G~is~~E~~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~~~ 170 (189)
T d1qv0a_ 107 EWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHL 170 (189)
T ss_dssp HHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHHHHHHHHH
T ss_pred HHHHHHHHHHccCCCCcccchhhHHHHHhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence 4567889999999999999999999999999999999999999999999999999999987653
|
| >d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Sandworm (Nereis diversicolor) [TaxId: 126592]
Probab=98.77 E-value=2.3e-08 Score=85.20 Aligned_cols=101 Identities=15% Similarity=0.281 Sum_probs=76.0
Q ss_pred HHHHHHHHHHhcCCCCCceehhhhHHHhhccch-----hhh----HHHHHHHHhhh--cCCCCCceeHHHHHHHHHhcCC
Q 010013 408 ESEVRQLMEAADVDGNGTIDYIEFITATMHMNR-----VER----EEHLYKAFEYF--DKDNSGYITMEELEHALKKYNM 476 (520)
Q Consensus 408 ~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~-----~~~----~~~~~~~F~~~--D~d~dG~I~~~El~~~l~~~~~ 476 (520)
..+++.+|..+|.|++|.|+++||..++..... ... .......|..+ |.+++|.|+.+||...+.....
T Consensus 5 ~~~l~~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~ 84 (174)
T d2scpa_ 5 VQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMKEMVK 84 (174)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCCCTTHHHHHHHHHHHHHHHTGGGTTTTSCEEHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHccCCCCcEeHHHHHHHHHHHhccccchhHHHHHhHHhhhhhccccccccCCCCcCcHHHHHHHHHhhhc
Confidence 367899999999999999999999887643210 111 12233344443 7789999999999988876533
Q ss_pred C------CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 477 G------DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 477 ~------~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
. ....+..+|..+|.|+||.|+.+||..+++.
T Consensus 85 ~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~ 122 (174)
T d2scpa_ 85 NPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGM 122 (174)
T ss_dssp CGGGTHHHHTHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHHCCCccccCCHHHHHHHHHH
Confidence 2 1334788999999999999999999999875
|
| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
Probab=98.76 E-value=7.8e-09 Score=89.32 Aligned_cols=67 Identities=24% Similarity=0.332 Sum_probs=61.1
Q ss_pred HHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhh
Q 010013 370 EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (520)
Q Consensus 370 ~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 436 (520)
.....+..+|+.+|.|++|+|+.+||..++..++..++.+++..+|..+|.|++|.|+|+||+..+.
T Consensus 102 ~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~~~ 168 (187)
T d1uhka1 102 LIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHL 168 (187)
T ss_dssp HHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCCCcccchHHHHHHHHHhCCCccHHHHHHHHHHhCCCCCCCEeHHHHHHHHH
Confidence 3445678999999999999999999999999999999999999999999999999999999987553
|
| >d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]
Probab=98.76 E-value=1.4e-09 Score=80.17 Aligned_cols=70 Identities=13% Similarity=0.288 Sum_probs=59.0
Q ss_pred HHHHhhHHHHhccc-CCCCCCc-ccHHHHhhhhhh-cCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc
Q 010013 369 EEEIMGLKEMFKSM-DTDNSGT-ITFEELKAGLPK-LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (520)
Q Consensus 369 ~~~~~~l~~~F~~~-D~~~~g~-i~~~e~~~~l~~-~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 438 (520)
+..+..+..+|+.+ |++|+|. ++.+||+.++.. ++...++.+++.+++.+|.|+||.|+|+||+.++...
T Consensus 6 E~ai~~ii~~F~kya~~dG~~~~l~~~Elk~ll~~e~~~~~~~~~v~~i~~~~D~n~DG~IdF~EF~~l~~~l 78 (87)
T d1xk4a1 6 EKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKM 78 (87)
T ss_dssp HHHHHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccCCCCCccCHHHHHHHHHHhcCCccchHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 45567788999888 8999985 599999999975 6666666779999999999999999999999987643
|
| >d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Pob1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.75 E-value=3.1e-09 Score=82.38 Aligned_cols=63 Identities=22% Similarity=0.322 Sum_probs=54.8
Q ss_pred hHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcceeHHHHHHHH
Q 010013 443 REEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMM 506 (520)
Q Consensus 443 ~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~l 506 (520)
..+.+..+|+.+|+|++|+|+.+|++.+|...+.. .+++.++++.+|.|+||.|+++||+.+|
T Consensus 20 e~~~y~~lF~~~D~d~~G~Is~~e~~~~l~~s~L~-~~~L~~Iw~l~D~d~dG~l~~~EF~~am 82 (110)
T d1iq3a_ 20 QREYYVNQFRSLQPDPSSFISGSVAKNFFTKSKLS-IPELSYIWELSDADCDGALTLPEFCAAF 82 (110)
T ss_dssp SHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSSCS-SCCHHHHHHHHCSSSCSEEEHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcccchhHHHHHHHHHhhccc-hHHHHHHHHHhccCCCCeECHHHHHHHH
Confidence 34568899999999999999999999999877664 3468999999999999999999998655
|
| >d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]
Probab=98.74 E-value=1.1e-08 Score=75.04 Aligned_cols=69 Identities=22% Similarity=0.335 Sum_probs=57.0
Q ss_pred HHHHhhHHHHhccc-CCCCCC-cccHHHHhhhhhhc-----CCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhc
Q 010013 369 EEEIMGLKEMFKSM-DTDNSG-TITFEELKAGLPKL-----GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (520)
Q Consensus 369 ~~~~~~l~~~F~~~-D~~~~g-~i~~~e~~~~l~~~-----~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 437 (520)
+..+..+..+|+.+ +.++++ +|+.+||+.+++.. +...+.+.++.+|+.+|.|+||.|+|+||+.++..
T Consensus 4 E~ai~~li~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD~n~Dg~idF~EF~~li~~ 79 (87)
T d1e8aa_ 4 EEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAI 79 (87)
T ss_dssp HHHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccCCCCCeEcHHHHHHHHHHHccccccCCCCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHH
Confidence 35677889999988 556554 69999999999773 33456788999999999999999999999988754
|
| >d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]
Probab=98.74 E-value=1.7e-09 Score=82.48 Aligned_cols=70 Identities=19% Similarity=0.303 Sum_probs=58.4
Q ss_pred hHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCC-------CCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc
Q 010013 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTR-------LSESEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (520)
Q Consensus 368 ~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~-------~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 438 (520)
.+..+..+.++|+.+| +++|.|+..||..+++..+.. .+...++.+|+.+|.|+||.|+|+||+.++..+
T Consensus 5 ~E~~i~~l~~~F~~y~-~~dG~i~~~El~~ll~~~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~l 81 (100)
T d1psra_ 5 AERSIIGMIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGDI 81 (100)
T ss_dssp HHHHHHHHHHHHHHTC-CTTSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-CCCCcccHHHHHHHHHHHccccccccccCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence 4567888999999997 789999999999999875422 244568999999999999999999999987653
|
| >d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calerythrin species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=98.72 E-value=2.6e-08 Score=84.81 Aligned_cols=100 Identities=18% Similarity=0.291 Sum_probs=81.3
Q ss_pred HHHHhcccCCCCCCcccHHHHhhhhhhcCCCCC--------HHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHH
Q 010013 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLS--------ESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEH 446 (520)
Q Consensus 375 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~--------~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~ 446 (520)
...++...|.+++|.|+..++...+........ .+.+..+|..+|.|++|.|+.+||..++.... .+.++
T Consensus 60 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~~~~~~--~~~~~ 137 (176)
T d1nyaa_ 60 FDYLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG--MSKAE 137 (176)
T ss_dssp HHHHHHHHTSCTTCCBCHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT--CCHHH
T ss_pred HHHHHHHhcCCCCCcccHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHHccCCChhhhHHHHHHHHHhcC--CcHHH
Confidence 345677888999999999999887766433332 24478899999999999999999998876442 45678
Q ss_pred HHHHHhhhcCCCCCceeHHHHHHHHHhcCC
Q 010013 447 LYKAFEYFDKDNSGYITMEELEHALKKYNM 476 (520)
Q Consensus 447 ~~~~F~~~D~d~dG~I~~~El~~~l~~~~~ 476 (520)
++.+|+.+|.|+||.|+.+||..+++.+..
T Consensus 138 ~~~~f~~~D~d~dG~i~~~Ef~~~~~~~~~ 167 (176)
T d1nyaa_ 138 AAEAFNQVDTNGNGELSLDELLTAVRDFHF 167 (176)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHSCCSS
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHHHHhc
Confidence 999999999999999999999999987643
|
| >d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=98.69 E-value=4.4e-09 Score=60.40 Aligned_cols=32 Identities=44% Similarity=0.800 Sum_probs=29.0
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHhcC
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYN 475 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~ 475 (520)
+++++.+|+.||+|++|+|+..||+.+|..+|
T Consensus 2 eeel~eAF~~FDkDg~G~Is~~EL~~vm~~lG 33 (33)
T d2hf5a1 2 EEEIREAFRVFDKDGNGYISAAELRHVMTNLG 33 (33)
T ss_dssp HHHHHHHHHHHSSSCCSCBCHHHHHHHTTSCC
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC
Confidence 56899999999999999999999999988765
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.66 E-value=3.6e-09 Score=89.69 Aligned_cols=98 Identities=10% Similarity=0.043 Sum_probs=73.0
Q ss_pred HHHHHHHH--hcCCCCCceehhhhHHHhhccchh--hhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHH
Q 010013 410 EVRQLMEA--ADVDGNGTIDYIEFITATMHMNRV--EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEI 485 (520)
Q Consensus 410 ~~~~~~~~--~d~~~~g~i~~~ef~~~~~~~~~~--~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~ 485 (520)
-+++++.. +|.|++|+|+.+|+..++...... ...+.+..+|...|.+++|.|+++||..++..+.. ..++..+
T Consensus 6 ~l~k~~~k~~~d~n~dG~Is~~el~k~l~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~F~eF~~~~~~l~~--r~ei~~~ 83 (170)
T d2zkmx1 6 FLDKILVKLKMQLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLCP--RPEIDEI 83 (170)
T ss_dssp HHHHHHHHHHHSCCTTSCEEHHHHHHHSCSCHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHSC--CHHHHTT
T ss_pred HHHHHHHHHhcccCCCCCCcHHHHHHHHHHhhhhHHHHHHHHhhhhccccccCCCccCHHHHHHHHhccCC--HHHHHHH
Confidence 34556665 699999999999999988643322 23456777899999999999999999999988754 3578999
Q ss_pred HHHhcCCCCcceeHHHHHHHHHcC
Q 010013 486 IAEVDIDNDGRINYEEFAAMMRKG 509 (520)
Q Consensus 486 ~~~~d~~~dg~i~~~ef~~~l~~~ 509 (520)
|..+|.|++|.||.+||..+|...
T Consensus 84 F~~~d~d~~~~it~~el~~fL~~~ 107 (170)
T d2zkmx1 84 FTSYHAKAKPYMTKEHLTKFINQK 107 (170)
T ss_dssp CC--------CCCHHHHHHHHHHT
T ss_pred HHHHcCCCCCcccHHHHHHHHHHH
Confidence 999999999999999999999863
|
| >d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Nucleobindin 1 (CALNUC) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.66 E-value=2.5e-08 Score=75.95 Aligned_cols=30 Identities=13% Similarity=0.211 Sum_probs=23.8
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHh
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKK 473 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~ 473 (520)
...+..+|+.+|.|+||.||.+||.++++.
T Consensus 67 ~~~v~~~~~~~D~d~DG~Is~~EF~~~~~~ 96 (99)
T d1snla_ 67 LRMREHVMKNVDTNQDRLVTLEEFLASTQR 96 (99)
T ss_dssp HHHHHHHHHHTCSSCSSEEEHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCCCCCcCcHHHHHHHHhc
Confidence 445778888888888888888888887764
|
| >d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.65 E-value=1.3e-08 Score=77.26 Aligned_cols=61 Identities=25% Similarity=0.404 Sum_probs=52.9
Q ss_pred hHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhh
Q 010013 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (520)
Q Consensus 374 ~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 436 (520)
.++++|+.+|.+++|+|+.+|+..++...+ ++.++++.+|+.+|.|++|.|+++||..++.
T Consensus 12 ~y~~~F~~~D~d~~G~i~~~e~~~~l~~s~--L~~~~L~~i~~~~D~d~dG~L~~~EF~~am~ 72 (99)
T d1qjta_ 12 VYEKYYRQVEAGNTGRVLALDAAAFLKKSG--LPDLILGKIWDLADTDGKGVLSKQEFFVALR 72 (99)
T ss_dssp HHHHHHHHHCCTTSSCCCSHHHHHHHHTSS--SCHHHHHHHHHHHCCSSSSSCCSHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcccHHHHHHHHHHcC--CcHHHHHHHHHHHcCCCCCccCHHHHHHHHH
Confidence 466889999999999999999999988765 6788899999999999999999999987664
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.58 E-value=9.1e-08 Score=87.23 Aligned_cols=89 Identities=18% Similarity=0.119 Sum_probs=64.1
Q ss_pred cccceeecceeeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 65 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
....|+..+..+.++.+.||++.. +++.+++|+....... ....+.+|...+..+.++--+.+++.+...++..+
T Consensus 12 ~~~~~~~~~~~~G~s~~~v~rv~~--~~~~~vlk~~~~~~~~---~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~ 86 (263)
T d1j7la_ 12 LIEKYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYKG---TTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN 86 (263)
T ss_dssp HHTTSEEEECSCCCSSSEEEEEEC--SSCEEEEEEECGGGTT---STTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred hhhceEEEEcCCCCCCCcEEEEEe--CCCeEEEEEcCCCccc---chhhHHHHHHHHHHHhccCCCCcEEEEEecCCceE
Confidence 335566666665666678998753 4567888887543321 22346789999988876655778888888899999
Q ss_pred EEEeccCCCchHHH
Q 010013 145 LIMDLCAGGELFDR 158 (520)
Q Consensus 145 lv~e~~~g~~L~~~ 158 (520)
+||++++|.++.+.
T Consensus 87 lv~~~l~G~~~~~~ 100 (263)
T d1j7la_ 87 LLMSEADGVLCSEE 100 (263)
T ss_dssp EEEECCSSEEHHHH
T ss_pred EEEEeccccccccc
Confidence 99999999877553
|
| >d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Cow (Bos taurus), s100b [TaxId: 9913]
Probab=98.53 E-value=1.8e-07 Score=68.52 Aligned_cols=64 Identities=17% Similarity=0.419 Sum_probs=52.7
Q ss_pred HHHHHHHhhh-cCCCC-CceeHHHHHHHHHh-----cCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 445 EHLYKAFEYF-DKDNS-GYITMEELEHALKK-----YNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 445 ~~~~~~F~~~-D~d~d-G~I~~~El~~~l~~-----~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..+..+|..| .++|+ +.|+..||+.+++. ++.. ++..++++|+.+|.|+||.|+|+||+.++..
T Consensus 9 ~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~~d~~m~~LD~n~Dg~vdF~EF~~li~~ 80 (90)
T d3cr5x1 9 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAM 80 (90)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 4677889998 45555 57999999999986 2323 6778999999999999999999999998753
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Probab=98.48 E-value=5.5e-08 Score=91.58 Aligned_cols=99 Identities=21% Similarity=0.291 Sum_probs=73.2
Q ss_pred HHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCH-----------------------------HHHHHHHHHhcCCCCCc
Q 010013 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSE-----------------------------SEVRQLMEAADVDGNGT 425 (520)
Q Consensus 375 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~-----------------------------~~~~~~~~~~d~~~~g~ 425 (520)
+...|+.+|.+++|.++..++...+...+..... ..+..+|..+|.|++|.
T Consensus 190 ~~~~F~~~d~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~F~~~D~d~~G~ 269 (321)
T d1ij5a_ 190 LVADFRKIDTNSNGTLSRKEFREHFVRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADFDKSGQ 269 (321)
T ss_dssp SCCCHHHHCTTCCSEECHHHHHHHHHHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHHHHHTCSSSCSS
T ss_pred hhHHHHHHhhcccccchhHHHhhhhhcccccchHHHHHHHHhhhcccccccccccccchhhhhhHHHHHHHHHhcCCCCC
Confidence 4455666667777777776666665554433211 12345788899999999
Q ss_pred eehhhhHHHhhccch-hhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHh
Q 010013 426 IDYIEFITATMHMNR-VEREEHLYKAFEYFDKDNSGYITMEELEHALKK 473 (520)
Q Consensus 426 i~~~ef~~~~~~~~~-~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~ 473 (520)
|+..||..++..... ..+.+.+..+|+.+|.|+||+|+++||..+|--
T Consensus 270 Is~~E~~~~l~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~ml~ 318 (321)
T d1ij5a_ 270 LSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLVLL 318 (321)
T ss_dssp EEHHHHHHHHHHTTCCGGGCSTHHHHHHHHTTTTCSEECHHHHHHHHHH
T ss_pred CcHHHHHHHHHHcCCCcCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 999999998876553 355667899999999999999999999998754
|
| >d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Cow (Bos taurus), s100b [TaxId: 9913]
Probab=98.42 E-value=2.4e-07 Score=67.80 Aligned_cols=70 Identities=24% Similarity=0.429 Sum_probs=56.0
Q ss_pred HHHHhhHHHHhccc-CCCCC-CcccHHHHhhhhhh-----cCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc
Q 010013 369 EEEIMGLKEMFKSM-DTDNS-GTITFEELKAGLPK-----LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (520)
Q Consensus 369 ~~~~~~l~~~F~~~-D~~~~-g~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 438 (520)
+..+..+..+|+.+ ..+|+ +.|+..||+.++.. ++...++..+..+|+.+|.|+||.|+|+||+.++...
T Consensus 5 E~ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~~d~~m~~LD~n~Dg~vdF~EF~~li~~l 81 (90)
T d3cr5x1 5 EKAVVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMI 81 (90)
T ss_dssp HHHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 34566788999988 45555 57999999999977 3334456779999999999999999999999877643
|
| >d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]
Probab=98.38 E-value=2.2e-07 Score=68.68 Aligned_cols=64 Identities=20% Similarity=0.438 Sum_probs=51.8
Q ss_pred HHHHHHHhhhc-CCCC-CceeHHHHHHHHHh-----cCC-CCHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 445 EHLYKAFEYFD-KDNS-GYITMEELEHALKK-----YNM-GDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 445 ~~~~~~F~~~D-~d~d-G~I~~~El~~~l~~-----~~~-~~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..+..+|..|. ++|+ +.++..||+.++.. ++. .++..++++|+.+|.|+||.|+|+||+.++..
T Consensus 9 ~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~li~~ 80 (95)
T d1qlsa_ 9 ESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGG 80 (95)
T ss_dssp HHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHH
Confidence 45777888884 4555 67999999999975 222 26678999999999999999999999988753
|
| >d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.36 E-value=2.3e-07 Score=50.42 Aligned_cols=32 Identities=47% Similarity=0.747 Sum_probs=26.5
Q ss_pred hHHHHHHHHhhhcCCCCCceeHHHHHHHHHhc
Q 010013 443 REEHLYKAFEYFDKDNSGYITMEELEHALKKY 474 (520)
Q Consensus 443 ~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~ 474 (520)
+++++..+|++||+|.||+|+.+||..+++.-
T Consensus 2 sEeELae~FRifDkNaDGyiD~eEl~~ilr~t 33 (34)
T d1ctda_ 2 SEEELANAFRIFDKNADGYIDIEELGEILRAT 33 (34)
T ss_dssp HHHHHHHHHHTTCCSSSSCBCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHccCCcccccHHHHHHHHHhc
Confidence 45778889999999999999999998887653
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=98.35 E-value=5.9e-07 Score=86.68 Aligned_cols=82 Identities=11% Similarity=0.149 Sum_probs=53.6
Q ss_pred cceeeccCCeEEEEEEEcCCCcEEEEEEecccccC----CcccHHHHHHHHHHHHhccCC--CCeeEEEEEEEeCCeEEE
Q 010013 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI----NRDDVEDVRREVQIMHHLTGH--RNIVELKGAYEDRHSVNL 145 (520)
Q Consensus 72 ~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~----~~~~~~~~~~e~~~l~~l~~h--p~iv~l~~~~~~~~~~~l 145 (520)
.+.||.|....||++....+++.+++|.-.+.... -+...++...|...|+.+..+ ..+++++.+ +....++
T Consensus 31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~l 108 (392)
T d2pula1 31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 108 (392)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEE
Confidence 46789999999999998877888999975432111 112345667788888877643 245566654 4555678
Q ss_pred EEeccCCCch
Q 010013 146 IMDLCAGGEL 155 (520)
Q Consensus 146 v~e~~~g~~L 155 (520)
|||++.+..+
T Consensus 109 vmE~L~~~~~ 118 (392)
T d2pula1 109 VMEDLSHLKI 118 (392)
T ss_dssp EECCCTTSEE
T ss_pred EEeccCCccc
Confidence 9999987654
|
| >d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]
Probab=98.31 E-value=5.6e-07 Score=66.43 Aligned_cols=69 Identities=19% Similarity=0.313 Sum_probs=55.5
Q ss_pred HHHhhHHHHhcccC-CCCC-CcccHHHHhhhhhh-----cCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc
Q 010013 370 EEIMGLKEMFKSMD-TDNS-GTITFEELKAGLPK-----LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (520)
Q Consensus 370 ~~~~~l~~~F~~~D-~~~~-g~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 438 (520)
..+..+..+|+.+. .+|+ +.|+..||+.++.. ++..-+.+.+..+|+.+|.|+||.|+|+||+.++...
T Consensus 6 ~ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~li~~l 81 (95)
T d1qlsa_ 6 RCIESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGGL 81 (95)
T ss_dssp HHHHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence 45667888998874 4454 68999999999976 4444566789999999999999999999999887644
|
| >d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100p [TaxId: 9606]
Probab=98.29 E-value=8.7e-07 Score=65.29 Aligned_cols=64 Identities=19% Similarity=0.479 Sum_probs=49.6
Q ss_pred HHHHHHHhhhc-CCCC-CceeHHHHHHHHHh-----cCCC-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 445 EHLYKAFEYFD-KDNS-GYITMEELEHALKK-----YNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 445 ~~~~~~F~~~D-~d~d-G~I~~~El~~~l~~-----~~~~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
..+..+|..|. .+|+ +.++.+||+.+++. ++.. ++..++++++.+|.|+||.|+|+||+.++..
T Consensus 9 ~~ii~vFhkYa~~~g~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~ 80 (94)
T d1j55a_ 9 GMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAA 80 (94)
T ss_dssp HHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCcccCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 46778899983 3444 58999999999986 2222 4567999999999999999999999998753
|
| >d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]
Probab=98.24 E-value=2.2e-06 Score=61.45 Aligned_cols=63 Identities=21% Similarity=0.463 Sum_probs=50.6
Q ss_pred HHHHHHHhhhcC-CC-CCceeHHHHHHHHHh-cC----C-C-CHHHHHHHHHHhcCCCCcceeHHHHHHHHH
Q 010013 445 EHLYKAFEYFDK-DN-SGYITMEELEHALKK-YN----M-G-DAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507 (520)
Q Consensus 445 ~~~~~~F~~~D~-d~-dG~I~~~El~~~l~~-~~----~-~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~ 507 (520)
..+..+|..|.. +| .+.++..||+.+++. ++ . . ++..++++|..+|.|+||.|+|+||+.++.
T Consensus 10 ~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~ 81 (83)
T d1xk4c1 10 ETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMA 81 (83)
T ss_dssp HHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHhCcCCCcccCCHHHHHHHHHHHhHHHhcCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHh
Confidence 467788999943 33 368999999999986 22 1 1 455689999999999999999999999875
|
| >d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=98.20 E-value=3.3e-07 Score=52.40 Aligned_cols=31 Identities=32% Similarity=0.593 Sum_probs=28.2
Q ss_pred hhHHHHhcccCCCCCCcccHHHHhhhhhhcC
Q 010013 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKLG 403 (520)
Q Consensus 373 ~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~ 403 (520)
+++.+.|+.||+|+||+|+..||+.+|..+|
T Consensus 3 eel~eAF~~FDkDg~G~Is~~EL~~vm~~lG 33 (33)
T d2hf5a1 3 EEIREAFRVFDKDGNGYISAAELRHVMTNLG 33 (33)
T ss_dssp HHHHHHHHHHSSSCCSCBCHHHHHHHTTSCC
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC
Confidence 3688999999999999999999999998775
|
| >d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100p [TaxId: 9606]
Probab=98.17 E-value=1e-06 Score=64.97 Aligned_cols=69 Identities=26% Similarity=0.415 Sum_probs=51.9
Q ss_pred HHHHhhHHHHhcccC-CCCC-CcccHHHHhhhhhh-----cCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhc
Q 010013 369 EEEIMGLKEMFKSMD-TDNS-GTITFEELKAGLPK-----LGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMH 437 (520)
Q Consensus 369 ~~~~~~l~~~F~~~D-~~~~-g~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 437 (520)
+..+..+..+|+.+. .+++ +.|+.+||+.++.. ++...++..++.+|+.+|.|+||.|+|+||+.++..
T Consensus 5 E~ai~~ii~vFhkYa~~~g~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~ 80 (94)
T d1j55a_ 5 ETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAA 80 (94)
T ss_dssp HHHHHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccCCCcccCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 345667889999984 3443 58999999999976 233334566999999999999999999999988754
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=98.10 E-value=3.2e-06 Score=76.18 Aligned_cols=75 Identities=11% Similarity=0.124 Sum_probs=52.9
Q ss_pred eeeccCC-eEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCC-CCeeEEEEEEEeCCeEEEEEeccC
Q 010013 74 ELGRGQF-GVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH-RNIVELKGAYEDRHSVNLIMDLCA 151 (520)
Q Consensus 74 ~lg~G~~-g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~h-p~iv~l~~~~~~~~~~~lv~e~~~ 151 (520)
.+..|.. +.||+.... ++..+++|...... ...+..|+..++.+..+ -.+.+++.+..+++..++||++++
T Consensus 17 ~~~~G~s~~~v~r~~~~-~~~~~vlK~~~~~~------~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~ 89 (255)
T d1nd4a_ 17 QQTIGCSDAAVFRLSAQ-GRPVLFVKTDLSGA------LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVP 89 (255)
T ss_dssp ECSCTTSSCEEEEEECT-TSCCEEEEEECSCT------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCS
T ss_pred EcCCcccCCeEEEEEeC-CCCEEEEEeCCccC------HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeee
Confidence 4444543 678988764 46678889765432 23467888888888643 235678888888889999999999
Q ss_pred CCch
Q 010013 152 GGEL 155 (520)
Q Consensus 152 g~~L 155 (520)
|.++
T Consensus 90 G~~~ 93 (255)
T d1nd4a_ 90 GQDL 93 (255)
T ss_dssp SEET
T ss_pred cccc
Confidence 8765
|
| >d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]
Probab=98.00 E-value=5.2e-06 Score=59.41 Aligned_cols=67 Identities=21% Similarity=0.316 Sum_probs=51.7
Q ss_pred HHHhhHHHHhcccCC-CC-CCcccHHHHhhhhhh-cCC----C-CCHHHHHHHHHHhcCCCCCceehhhhHHHhh
Q 010013 370 EEIMGLKEMFKSMDT-DN-SGTITFEELKAGLPK-LGT----R-LSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (520)
Q Consensus 370 ~~~~~l~~~F~~~D~-~~-~g~i~~~e~~~~l~~-~~~----~-~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 436 (520)
..+..+..+|+.+.. +| .+.|+..||+.++.. +.. . .....++.+|+.+|.|+||.|+|+||+.++.
T Consensus 7 ~ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~ 81 (83)
T d1xk4c1 7 RNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMA 81 (83)
T ss_dssp HHHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCCCcccCCHHHHHHHHHHHhHHHhcCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHh
Confidence 445667888988843 33 368999999999876 322 1 2445689999999999999999999998764
|
| >d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=97.90 E-value=3.5e-06 Score=45.75 Aligned_cols=30 Identities=30% Similarity=0.384 Sum_probs=25.7
Q ss_pred hhHHHHhcccCCCCCCcccHHHHhhhhhhc
Q 010013 373 MGLKEMFKSMDTDNSGTITFEELKAGLPKL 402 (520)
Q Consensus 373 ~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~ 402 (520)
.+|.+.|+.||+|.||+|+.+||..+++.-
T Consensus 4 eELae~FRifDkNaDGyiD~eEl~~ilr~t 33 (34)
T d1ctda_ 4 EELANAFRIFDKNADGYIDIEELGEILRAT 33 (34)
T ss_dssp HHHHHHHHTTCCSSSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCCcccccHHHHHHHHHhc
Confidence 467889999999999999999999888653
|
| >d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Diacylglycerol kinase alpha, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.86 E-value=5.6e-06 Score=64.22 Aligned_cols=86 Identities=10% Similarity=0.124 Sum_probs=42.4
Q ss_pred CCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhc------CCCCCceehhhhHHHhhccch-h-hhHHHHHHHHhhhcCC
Q 010013 386 NSGTITFEELKAGLPKLGTRLSESEVRQLMEAAD------VDGNGTIDYIEFITATMHMNR-V-EREEHLYKAFEYFDKD 457 (520)
Q Consensus 386 ~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d------~~~~g~i~~~ef~~~~~~~~~-~-~~~~~~~~~F~~~D~d 457 (520)
.++.|+.+++.++.+... .+..+|+.+++.|- ...+|.|++++|..++...-. . ........+|+.||+|
T Consensus 4 ~~s~l~p~~l~~L~~~T~--fs~~ei~~l~~~Fk~~~~~~~~p~g~i~~~~F~~~~~~~f~~~~~~~~l~~rlF~~FD~~ 81 (118)
T d1tuza_ 4 ERGLISPSDFAQLQKYME--YSTKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFETG 81 (118)
T ss_dssp CCSCSCHHHHHHHHHHHH--HCCCCHHHHHHHHHTSGGGGGEETTEECHHHHHHHHHHHTTCSSCCHHHHHHHHHHSCCC
T ss_pred ccCCCCHHHHHHHHHHcC--CCHHHHHHHHHHHhccccccCCcccccCHHHHHHHHHHhCCCCCchHHHHHHHHHHHccc
Confidence 345567777666555433 23344555555551 123455666666555432211 1 1234455566666665
Q ss_pred CC--------CceeHHHHHHHHHh
Q 010013 458 NS--------GYITMEELEHALKK 473 (520)
Q Consensus 458 ~d--------G~I~~~El~~~l~~ 473 (520)
++ |.|+..||...|..
T Consensus 82 ~d~~~~~~~~g~I~f~efv~~LS~ 105 (118)
T d1tuza_ 82 HCLNETNVTKDVVCLNDVSCYFSL 105 (118)
T ss_dssp CCTTCCCCCSCCEEHHHHHHHHHH
T ss_pred cccccccCCCceeeHHHHHHHHHH
Confidence 54 44555555544443
|
| >d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Diacylglycerol kinase alpha, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.79 E-value=1.5e-06 Score=67.64 Aligned_cols=74 Identities=8% Similarity=0.057 Sum_probs=60.5
Q ss_pred hhhhHHHHhhHHHHhcccC---CCCCCcccHHHHhhhhhhcCCC--CCHHHHHHHHHHhcCCCC--------Cceehhhh
Q 010013 365 ENLSEEEIMGLKEMFKSMD---TDNSGTITFEELKAGLPKLGTR--LSESEVRQLMEAADVDGN--------GTIDYIEF 431 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D---~~~~g~i~~~e~~~~l~~~~~~--~~~~~~~~~~~~~d~~~~--------g~i~~~ef 431 (520)
..++..+++.+.+.|+... ...+|.|+.++|+.++..+... .++..++.+|..+|.|++ |.|+|.||
T Consensus 20 T~fs~~ei~~l~~~Fk~~~~~~~~p~g~i~~~~F~~~~~~~f~~~~~~~~l~~rlF~~FD~~~d~~~~~~~~g~I~f~ef 99 (118)
T d1tuza_ 20 MEYSTKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFETGHCLNETNVTKDVVCLNDV 99 (118)
T ss_dssp HHHCCCCHHHHHHHHHTSGGGGGEETTEECHHHHHHHHHHHTTCSSCCHHHHHHHHHHSCCCCCTTCCCCCSCCEEHHHH
T ss_pred cCCCHHHHHHHHHHHhccccccCCcccccCHHHHHHHHHHhCCCCCchHHHHHHHHHHHccccccccccCCCceeeHHHH
Confidence 5688899999999997653 2478999999999999875432 356788999999999976 89999999
Q ss_pred HHHhhcc
Q 010013 432 ITATMHM 438 (520)
Q Consensus 432 ~~~~~~~ 438 (520)
+..+..+
T Consensus 100 v~~LS~l 106 (118)
T d1tuza_ 100 SCYFSLL 106 (118)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9987644
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=97.52 E-value=0.00019 Score=68.65 Aligned_cols=75 Identities=11% Similarity=0.120 Sum_probs=52.5
Q ss_pred cceeeccCCeEEEEEEEcC-------CCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCCCeeEEEEEEEeCCeEE
Q 010013 72 GRELGRGQFGVTYLVTHKD-------TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVN 144 (520)
Q Consensus 72 ~~~lg~G~~g~Vy~~~~~~-------~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp~iv~l~~~~~~~~~~~ 144 (520)
++.|+.|-.-.+|++.... .++.|++++... . .......+|..+++.+..+.-.+++++++.+ .
T Consensus 47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~----~-~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g 117 (395)
T d1nw1a_ 47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN----P-ETESHLVAESVIFTLLSERHLGPKLYGIFSG----G 117 (395)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS----C-CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----E
T ss_pred EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCC----c-chhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----c
Confidence 4678999999999998753 235677777642 1 1223456899999999855444578877642 5
Q ss_pred EEEeccCCCch
Q 010013 145 LIMDLCAGGEL 155 (520)
Q Consensus 145 lv~e~~~g~~L 155 (520)
+|+||++|..|
T Consensus 118 ~I~efi~g~~l 128 (395)
T d1nw1a_ 118 RLEEYIPSRPL 128 (395)
T ss_dssp EEECCCCEEEC
T ss_pred eEEEEeccccC
Confidence 79999988654
|
| >d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Osteonectin domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.14 E-value=6.2e-05 Score=59.78 Aligned_cols=62 Identities=21% Similarity=0.306 Sum_probs=44.9
Q ss_pred HHHHHHhhhcCC-CCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCcceeHHHHHHHHHc
Q 010013 446 HLYKAFEYFDKD-NSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508 (520)
Q Consensus 446 ~~~~~F~~~D~d-~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~ 508 (520)
.+...|..+|.| +||.|+..||+.+...+ ...+.-++.+|+..|.|+||.|++.||...+.-
T Consensus 78 ~v~W~F~~LD~n~~D~~L~~~EL~~l~~~L-~~~e~C~~~F~~~CD~n~D~~Is~~EW~~Cf~v 140 (151)
T d1sraa_ 78 PVHWQFGQLDQHPIDGYLSHTELAPLRAPL-IPMEHCTTRFFETCDLDNDKYIALDEWAGCFGI 140 (151)
T ss_dssp HHHHHHHHHCCTTCSSEECTTTTGGGGSTT-STTGGGHHHHHHHHCTTCSSSEEHHHHHHHTTC
T ss_pred cceeehhhcCCCCCCCccCHHHHHHHHHhh-cCCchHHHHHHHHhcCCCCCcCCHHHHHHHcCC
Confidence 456678888888 58888888887754333 224445777888888888888888888887754
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=96.98 E-value=0.0017 Score=59.89 Aligned_cols=72 Identities=10% Similarity=0.117 Sum_probs=47.2
Q ss_pred cCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCCC-CeeEEE-----EEEEeCCeEEEEEeccC
Q 010013 78 GQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR-NIVELK-----GAYEDRHSVNLIMDLCA 151 (520)
Q Consensus 78 G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~hp-~iv~l~-----~~~~~~~~~~lv~e~~~ 151 (520)
+.-..||++... +|..|++|+..+.. ...+.+..|...+..|..+. -++..+ ..+...+..+.++++++
T Consensus 33 s~EN~vy~v~~~-dg~~~VlK~~rp~~----~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~ 107 (325)
T d1zyla1 33 SYENRVYQFQDE-DRRRFVVKFYRPER----WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG 107 (325)
T ss_dssp CSSSEEEEECCT-TCCCEEEEEECTTT----SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred cccceeEEEEcC-CCCEEEEEEeCCCC----CCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecC
Confidence 345689999874 57889999986532 23466788999998886321 111111 12345677889999998
Q ss_pred CCc
Q 010013 152 GGE 154 (520)
Q Consensus 152 g~~ 154 (520)
|..
T Consensus 108 G~~ 110 (325)
T d1zyla1 108 GRQ 110 (325)
T ss_dssp CEE
T ss_pred CcC
Confidence 743
|
| >d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Osteonectin domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.80 E-value=0.00032 Score=55.61 Aligned_cols=56 Identities=21% Similarity=0.226 Sum_probs=26.8
Q ss_pred hcccCCC-CCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhh
Q 010013 379 FKSMDTD-NSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATM 436 (520)
Q Consensus 379 F~~~D~~-~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 436 (520)
|..+|.| +||.|+..|+..+...+- ..+.=+..+++..|.|+||.|++.||..++.
T Consensus 83 F~~LD~n~~D~~L~~~EL~~l~~~L~--~~e~C~~~F~~~CD~n~D~~Is~~EW~~Cf~ 139 (151)
T d1sraa_ 83 FGQLDQHPIDGYLSHTELAPLRAPLI--PMEHCTTRFFETCDLDNDKYIALDEWAGCFG 139 (151)
T ss_dssp HHHHCCTTCSSEECTTTTGGGGSTTS--TTGGGHHHHHHHHCTTCSSSEEHHHHHHHTT
T ss_pred hhhcCCCCCCCccCHHHHHHHHHhhc--CCchHHHHHHHHhcCCCCCcCCHHHHHHHcC
Confidence 5555555 355555555555332221 1122244555555555555555555555443
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.05 E-value=0.0048 Score=56.50 Aligned_cols=147 Identities=18% Similarity=0.199 Sum_probs=75.8
Q ss_pred ccccceeecce-----eeccCCeEEEEEEEcCCCcEEEEEEecccccCCcccHHHHHHHHHHHHhccCC----CCeeEEE
Q 010013 64 DVRNTYIFGRE-----LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH----RNIVELK 134 (520)
Q Consensus 64 ~~~~~y~~~~~-----lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~l~~h----p~iv~l~ 134 (520)
.+...|.+++. |..|--.+.|++.... ..+++|++.... ..+.+..|+.++..|..+ |..+...
T Consensus 10 ~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~--g~yVLri~~~~~-----~~~~l~~~~~~l~~L~~~g~pvp~pi~~~ 82 (316)
T d2ppqa1 10 NFLTQYDVGSLTSYKGIAEGVENSNFLLHTTK--DPLILTLYEKRV-----EKNDLPFFLGLMQHLAAKGLSCPLPLPRK 82 (316)
T ss_dssp HHHTTBCCCCEEEEEEECC---EEEEEEEESS--CCEEEEEECC--------CCHHHHHHHHHHHHHHTTCCCCCBCCBT
T ss_pred HHHHhCCCCCceEeecCCCCcccCeEEEEECC--CcEEEEEcCCCC-----CHHHHHHHHHHHHhhhhccccccccceec
Confidence 34455666543 4577778899987643 358999875421 124556677777777621 2222110
Q ss_pred -E--EEEeCCeEEEEEeccCCCchHH--------------HHHhc-C--------CCC------------------HHHH
Q 010013 135 -G--AYEDRHSVNLIMDLCAGGELFD--------------RIIAK-G--------HYS------------------ERAA 170 (520)
Q Consensus 135 -~--~~~~~~~~~lv~e~~~g~~L~~--------------~l~~~-~--------~l~------------------~~~~ 170 (520)
| +.........++.+..|..... .++.. . ... ....
T Consensus 83 ~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (316)
T d2ppqa1 83 DGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGL 162 (316)
T ss_dssp TCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTH
T ss_pred CCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhcchhH
Confidence 0 1223455666777766643210 01100 0 000 0111
Q ss_pred HHHHHHHHHHHHHHH----HcCCeeecCCCCcEEeecCCCCCCeeEeecccccc
Q 010013 171 ANLCRQMVTVVHYCH----SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 220 (520)
Q Consensus 171 ~~i~~qi~~~l~~LH----~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 220 (520)
...+..+...+...+ ..|+||+|+.++||+++ .+...-|+||+.+..
T Consensus 163 ~~~l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~---~~~v~gvIDF~~~~~ 213 (316)
T d2ppqa1 163 REEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFL---GDELSGLIDFYFACN 213 (316)
T ss_dssp HHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEE---TTEEEEECCCTTCEE
T ss_pred HHHHHHHHHhhhccCccccccccccCCcchhhhhcc---cccceeEeccccccc
Confidence 222222333333332 24799999999999995 344467999998764
|
| >d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.98 E-value=0.011 Score=43.06 Aligned_cols=65 Identities=12% Similarity=0.179 Sum_probs=50.7
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHhc-CCC--CHHHHHHHHHHhcCCC----CcceeHHHHHHHHHcC
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKY-NMG--DAKTIKEIIAEVDIDN----DGRINYEEFAAMMRKG 509 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~-~~~--~~~~~~~~~~~~d~~~----dg~i~~~ef~~~l~~~ 509 (520)
..++..+|+.|-. +.+.+|.++|.++|... +.. +++.+.++|..+..+. .|.++++.|..+|.+.
T Consensus 7 R~ei~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~ii~~~e~~~~~~~~~~ls~~gF~~fL~S~ 78 (94)
T d1qasa1 7 RAEIDRAFEEAAG-SAETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLSA 78 (94)
T ss_dssp CHHHHHHHHHHHT-TSSSCBHHHHHHHHHHTSCCTTCSHHHHHHHHHHHCCCHHHHHTTBCCHHHHHHHHHSS
T ss_pred cHHHHHHHHHHhC-CCCccCHHHHHHHHHHHcCCccCCHHHHHHHHHHHcccHhhhhcCCcCHHHHHHHHcCc
Confidence 3468888998854 45679999999999874 332 7777899999987654 3679999999999874
|
| >d1j7qa_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=95.57 E-value=0.014 Score=37.40 Aligned_cols=72 Identities=22% Similarity=0.301 Sum_probs=60.0
Q ss_pred hhhhHHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhc-CCCC-CceehhhhHHHhh
Q 010013 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAAD-VDGN-GTIDYIEFITATM 436 (520)
Q Consensus 365 ~~~~~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d-~~~~-g~i~~~ef~~~~~ 436 (520)
..+.+++..+.+++|..||.|....-...+-..+|..+|...+..+.+.+++..- ..+| ..|..+||+.++.
T Consensus 6 ralgpeekdecmkifdifdrnaeniapvsdtmdmltklgqtytkreteaimkeargpkgdkknigpeewltlcs 79 (86)
T d1j7qa_ 6 RALGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPEEWLTLCS 79 (86)
T ss_dssp CCCSSTHHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTTHHHHHHH
T ss_pred cccCchhHHHHHHHHHHHhccccccCCcchHHHHHHHhhhHHhHHHHHHHHHHhcCCCCccccCCHHHHHHHHH
Confidence 3567788889999999999999888889999999999999999999999998873 2333 3588899988654
|
| >d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=92.74 E-value=0.062 Score=38.78 Aligned_cols=62 Identities=13% Similarity=0.149 Sum_probs=35.6
Q ss_pred hHHHHhcccCCCCCCcccHHHHhhhhhhcCC--CCCHHHHHHHHHHhcCCC----CCceehhhhHHHhh
Q 010013 374 GLKEMFKSMDTDNSGTITFEELKAGLPKLGT--RLSESEVRQLMEAADVDG----NGTIDYIEFITATM 436 (520)
Q Consensus 374 ~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~--~~~~~~~~~~~~~~d~~~----~g~i~~~ef~~~~~ 436 (520)
++..+|..+-. +.+.|+.++|..+|..... ..+.+.+..++..+..+. .+.++++.|...+.
T Consensus 9 ei~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~ii~~~e~~~~~~~~~~ls~~gF~~fL~ 76 (94)
T d1qasa1 9 EIDRAFEEAAG-SAETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLL 76 (94)
T ss_dssp HHHHHHHHHHT-TSSSCBHHHHHHHHHHTSCCTTCSHHHHHHHHHHHCCCHHHHHTTBCCHHHHHHHHH
T ss_pred HHHHHHHHHhC-CCCccCHHHHHHHHHHHcCCccCCHHHHHHHHHHHcccHhhhhcCCcCHHHHHHHHc
Confidence 34556666633 3356777777777766432 245556666777665542 24566666666554
|
| >d1h8ba_ a.39.1.7 (A:) alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: alpha-Actinin species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.65 E-value=0.24 Score=33.03 Aligned_cols=61 Identities=20% Similarity=0.386 Sum_probs=46.8
Q ss_pred hhhHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhcC-----CCCcceeHHHHHHHHHc
Q 010013 441 VEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDI-----DNDGRINYEEFAAMMRK 508 (520)
Q Consensus 441 ~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~d~-----~~dg~i~~~ef~~~l~~ 508 (520)
..+.+.+..+|+.+ .++..+||.+||++.| +.++++-+...+-. -..|..+|..|.+.|-.
T Consensus 4 ~~TaEqv~~aFr~l-A~~KpyVT~~dL~~~L------~peqaeyc~~~M~~y~~~~~~~~ayDY~sF~~~l~g 69 (73)
T d1h8ba_ 4 TDTAEQVIASFRIL-ASDKPYILAEELRREL------PPDQAQYCIKRMPAYSGPGSVPGALDYAAFSSALYG 69 (73)
T ss_dssp CSTHHHHHHHHHHH-TTSCSSBCHHHHHHHS------CHHHHHHHHHHSCSCCCSSCCTTCBCHHHHHHHHTC
T ss_pred cccHHHHHHHHHHH-hCCCCeeCHHHHHhhc------CHHHHHHHHHHCcccCCCCCCCCcccHHHHHHHHhc
Confidence 45678899999999 5678999999998766 34567777777632 13677999999987743
|
| >d1j7qa_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=91.76 E-value=0.7 Score=29.33 Aligned_cols=66 Identities=20% Similarity=0.341 Sum_probs=53.4
Q ss_pred hHHHHHHHHhhhcCCCCCceeHHHHHHHHHhcCCC-CHHHHHHHHHHhc-CCCC-cceeHHHHHHHHHc
Q 010013 443 REEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVD-IDND-GRINYEEFAAMMRK 508 (520)
Q Consensus 443 ~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~-~~~~~~~~~~~~d-~~~d-g~i~~~ef~~~l~~ 508 (520)
..++...+|..||.|-...-...+-..+|..+|.. +..+.+.++++.- ..|| ..|.-+||+.++..
T Consensus 12 ekdecmkifdifdrnaeniapvsdtmdmltklgqtytkreteaimkeargpkgdkknigpeewltlcsk 80 (86)
T d1j7qa_ 12 EKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPEEWLTLCSK 80 (86)
T ss_dssp HHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTTHHHHHHHH
T ss_pred hHHHHHHHHHHHhccccccCCcchHHHHHHHhhhHHhHHHHHHHHHHhcCCCCccccCCHHHHHHHHHH
Confidence 45667789999999999999999999999999988 8888888888763 2233 35899999988764
|
| >d2cclb1 a.139.1.1 (B:1-59) Endo-1,4-beta-xylanase Y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Type I dockerin domain superfamily: Type I dockerin domain family: Type I dockerin domain domain: Endo-1,4-beta-xylanase Y species: Clostridium thermocellum [TaxId: 1515]
Probab=90.28 E-value=0.24 Score=31.87 Aligned_cols=51 Identities=22% Similarity=0.320 Sum_probs=28.3
Q ss_pred cCCCCCceeHHHHHHHHHhc-CCCCHHHHHHHHHHhcCCCCcceeHHHHHHHHH
Q 010013 455 DKDNSGYITMEELEHALKKY-NMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507 (520)
Q Consensus 455 D~d~dG~I~~~El~~~l~~~-~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~ 507 (520)
|.|+||.|+..++..+.+-+ +..... ..-+...|.|+||.|+..++..+++
T Consensus 2 DvN~Dg~vni~D~~~l~~~il~~~~~~--~~~~~aaDvn~Dg~i~i~D~~~l~~ 53 (59)
T d2cclb1 2 DVNGDGTINSTDLTMLKRSVLRAITLT--DDAKARADVDKNGSINAADVLLLSR 53 (59)
T ss_dssp CTTCSSSCCHHHHHHHHHHHTTSSCCC--HHHHHHHCTTCSSCCSHHHHHHHHH
T ss_pred CCCCCCCCcHHHHHHHHHHHhCCCCCC--hhhhhccccCCCCCCCHHHHHHHHH
Confidence 55667777776666555432 222111 1224556777777777776666544
|
| >d1eg3a1 a.39.1.7 (A:85-209) Dystrophin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Dystrophin species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.80 E-value=1.4 Score=32.77 Aligned_cols=77 Identities=9% Similarity=0.177 Sum_probs=48.3
Q ss_pred HHHHhcccCCC-CCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhccchhhhHHHHHHHHhh
Q 010013 375 LKEMFKSMDTD-NSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEY 453 (520)
Q Consensus 375 l~~~F~~~D~~-~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~ 453 (520)
+.++|+...-+ ++..++..++...+.. +|..+.....+.|+.+..... -+..+++.
T Consensus 45 ~~e~f~~~~l~~~d~~l~v~~l~~~L~~------------iy~~l~~~~~~~v~vp~~~dl-----------~LN~Llnv 101 (125)
T d1eg3a1 45 ACDALDQHNLKQNDQPMDILQIINCLTT------------IYDRLEQEHNNLVNVPLCVDM-----------CLNWLLNV 101 (125)
T ss_dssp HHHHHHHTTCCCTTSEEEHHHHHHHHHH------------HHHHHHHHSTTTCCHHHHHHH-----------HHHHHHHH
T ss_pred HHHHHHHcCCCCCccCCCHHHHHHHHHH------------HHHHhhhhCcccCChHHHHHH-----------HHHHHHHH
Confidence 44455333222 3456676666665543 455444444455555443332 37788999
Q ss_pred hcCCCCCceeHHHHHHHHHhc
Q 010013 454 FDKDNSGYITMEELEHALKKY 474 (520)
Q Consensus 454 ~D~d~dG~I~~~El~~~l~~~ 474 (520)
||.+++|+|+.-.|+..+-.+
T Consensus 102 YD~~rtG~i~vls~KvaL~~L 122 (125)
T d1eg3a1 102 YDTGRTGRIRVLSFKTGIISL 122 (125)
T ss_dssp HCTTCCSEEEHHHHHHHHHHT
T ss_pred hCCCCCCeeeehHHHHHHHHH
Confidence 999999999999999887654
|
| >d2cclb1 a.139.1.1 (B:1-59) Endo-1,4-beta-xylanase Y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Type I dockerin domain superfamily: Type I dockerin domain family: Type I dockerin domain domain: Endo-1,4-beta-xylanase Y species: Clostridium thermocellum [TaxId: 1515]
Probab=86.41 E-value=0.31 Score=31.34 Aligned_cols=20 Identities=20% Similarity=0.174 Sum_probs=9.6
Q ss_pred hhhcCCCCCceeHHHHHHHH
Q 010013 452 EYFDKDNSGYITMEELEHAL 471 (520)
Q Consensus 452 ~~~D~d~dG~I~~~El~~~l 471 (520)
...|.|+||.|+..++..+.
T Consensus 33 ~aaDvn~Dg~i~i~D~~~l~ 52 (59)
T d2cclb1 33 ARADVDKNGSINAADVLLLS 52 (59)
T ss_dssp HHHCTTCSSCCSHHHHHHHH
T ss_pred hccccCCCCCCCHHHHHHHH
Confidence 34455555555555544443
|
| >d1pula1 a.39.1.11 (A:18-120) Hypothetical protein c32e8.3 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: p25-alpha domain: Hypothetical protein c32e8.3 species: Caenorhabditis elegans [TaxId: 6239]
Probab=86.25 E-value=0.93 Score=32.60 Aligned_cols=69 Identities=6% Similarity=0.043 Sum_probs=52.2
Q ss_pred HHHHhhHHHHhcccCCCCCCcccHHHHhhhhhhc----CCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc
Q 010013 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL----GTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (520)
Q Consensus 369 ~~~~~~l~~~F~~~D~~~~g~i~~~e~~~~l~~~----~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 438 (520)
..+++...+.|..|-.-..-.|+...|..+++.. +...+..++.-+|..+-..+ ..|+|++|..++...
T Consensus 4 ~~~l~~~F~aF~~FG~~~~~em~~~~f~Kl~kdc~lid~K~~T~tdvDIiF~K~k~k~-~ri~f~~F~~aL~~l 76 (103)
T d1pula1 4 DADVKKRWDAFTKFGAATATEMTGKNFDKWLKDAGVLDNKAITGTMTGIAFSKVTGPK-KKATFDETKKVLAFV 76 (103)
T ss_dssp HHHHHHHHHHHHHHTCSSSSCCCHHHHHHHHHHHTSCCSSSSCHHHHHHHHHHHTCSS-SCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCcCCCHHHHHHHHHHcCCCcCCCCCccchhhhhHhhcCCC-CCcCHHHHHHHHHHH
Confidence 4566677777888754333479999999999873 24688899999999985543 569999999887643
|
| >d1wlma1 a.39.1.11 (A:8-145) Protein cgi-38 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: p25-alpha domain: Protein cgi-38 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=85.44 E-value=2.4 Score=32.18 Aligned_cols=47 Identities=13% Similarity=0.192 Sum_probs=25.7
Q ss_pred eehhhhHHHhhcc---c-hhhhHHHHHHHHhhhcCCCCCceeHHHHHHHHH
Q 010013 426 IDYIEFITATMHM---N-RVEREEHLYKAFEYFDKDNSGYITMEELEHALK 472 (520)
Q Consensus 426 i~~~ef~~~~~~~---~-~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~ 472 (520)
++-..|..++... . ...+...+..+|..+-.-+...|++++|..+|.
T Consensus 30 m~~~~f~K~~kd~~lid~K~~T~t~~diiF~k~k~k~~r~i~f~~F~~aL~ 80 (138)
T d1wlma1 30 MNGKNWAKLCKDCKVADGKAVTGTDVDIVFSKVKAKSARVINYEEFKKALE 80 (138)
T ss_dssp EEHHHHHHHHHHTSCCCSSSSCHHHHHHHHHHHSCSSCSEEEHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCcCCccchhhHHHHHHHhhcCCCcccCHHHHHHHHH
Confidence 6666666655532 1 224445566666665444455566666665554
|
| >d1eg3a2 a.39.1.7 (A:210-306) Dystrophin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Dystrophin species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.23 E-value=4 Score=28.64 Aligned_cols=64 Identities=16% Similarity=0.196 Sum_probs=48.9
Q ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHhc-------CC------C-CHHHHHHHHHHhcCCCCcceeHHHHHHHHHcC
Q 010013 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKY-------NM------G-DAKTIKEIIAEVDIDNDGRINYEEFAAMMRKG 509 (520)
Q Consensus 444 ~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~-------~~------~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~l~~~ 509 (520)
.++.+-+|+.+ .|.+|.++...|..+|+.+ |+ . -+..++..|... ++...|+.++|+.-|..+
T Consensus 3 ~dKyRYlF~qi-sd~~g~~~~~kl~~lL~d~lqlP~~vgE~~sFG~s~ie~sv~sCF~~~--~~~~~i~~~~FL~wl~~e 79 (97)
T d1eg3a2 3 EDKYRYLFKQV-ASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA--NNKPEIEAALFLDWMRLE 79 (97)
T ss_dssp HHHHHHHHHHH-SCTTSCBCHHHHHHHHHHHHHHHHHTTCGGGGTCSCCHHHHHHHHHHT--TTCSCBCHHHHHHHHHTC
T ss_pred HHHHHHHHHHH-hCCCCCCcHHHHHHHHHHHHHHHHHhCcccccCCCcchHHHHHHHhcc--CCCCcccHHHHHHHHHhC
Confidence 46788899999 7889999999988888542 33 2 256788888765 345569999999999875
Q ss_pred C
Q 010013 510 N 510 (520)
Q Consensus 510 ~ 510 (520)
+
T Consensus 80 P 80 (97)
T d1eg3a2 80 P 80 (97)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >d1dava_ a.139.1.1 (A:) Cellulosome endoglucanase SS {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Type I dockerin domain superfamily: Type I dockerin domain family: Type I dockerin domain domain: Cellulosome endoglucanase SS species: Clostridium thermocellum [TaxId: 1515]
Probab=85.00 E-value=0.12 Score=34.78 Aligned_cols=48 Identities=13% Similarity=0.153 Sum_probs=22.0
Q ss_pred CCCCCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHH
Q 010013 383 DTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITA 434 (520)
Q Consensus 383 D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~ 434 (520)
|.|+||.++..++..++..+....+..+ +..+|.|+||.|+..++..+
T Consensus 8 DvN~DG~Vd~~D~~~~~~~i~~~~~~~~----~~~aDvn~DG~Id~~D~~~l 55 (71)
T d1dava_ 8 DVNDDGKVNSTDAVALKRYVLRSGISIN----TDNADLNEDGRVNSTDLGIL 55 (71)
T ss_dssp CSSSSSBSSGGGHHHHHHHHHCSCSCCC----GGGTCSSSSSSCSSHHHHHH
T ss_pred ccCCCCCCcHHHHHHHHHHHcCCCCcCC----CcceecCCCCCcCHHHHHHH
Confidence 5566666666665555444311111111 11345555555555555443
|
| >d1dava_ a.139.1.1 (A:) Cellulosome endoglucanase SS {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Type I dockerin domain superfamily: Type I dockerin domain family: Type I dockerin domain domain: Cellulosome endoglucanase SS species: Clostridium thermocellum [TaxId: 1515]
Probab=83.64 E-value=0.13 Score=34.63 Aligned_cols=19 Identities=32% Similarity=0.739 Sum_probs=9.2
Q ss_pred hcCCCCcceeHHHHHHHHH
Q 010013 489 VDIDNDGRINYEEFAAMMR 507 (520)
Q Consensus 489 ~d~~~dg~i~~~ef~~~l~ 507 (520)
+|.|+||.|+..++..+.+
T Consensus 39 aDvn~DG~Id~~D~~~l~~ 57 (71)
T d1dava_ 39 ADLNEDGRVNSTDLGILKR 57 (71)
T ss_dssp TCSSSSSSCSSHHHHHHHH
T ss_pred eecCCCCCcCHHHHHHHHH
Confidence 4555555555555444433
|
| >d2b59b1 a.139.1.1 (B:104-163) Cellulosomal scaffolding protein A {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Type I dockerin domain superfamily: Type I dockerin domain family: Type I dockerin domain domain: Cellulosomal scaffolding protein A species: Clostridium thermocellum [TaxId: 1515]
Probab=83.28 E-value=0.24 Score=30.52 Aligned_cols=50 Identities=14% Similarity=0.333 Sum_probs=33.7
Q ss_pred CCCcccHHHHhhhhhhcCCCCCHHHHHHHHHHhcCCCCCceehhhhHHHhhcc
Q 010013 386 NSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM 438 (520)
Q Consensus 386 ~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 438 (520)
+||.|+..++..+.+.++.....++ .-..+|.|.||.|+.++-+.+..++
T Consensus 2 qD~~INm~DVmei~k~F~~~~g~~~---y~~~lDlN~dGaInm~Di~Iv~khF 51 (60)
T d2b59b1 2 KDNSINLLDVAEVIRCFNATKGSAN---YVEELDINRNGAINMQDIMIVHKHF 51 (60)
T ss_dssp SSSCCCHHHHHHHHHTTTCBTTSTT---CCGGGSTTCSSBCSHHHHHHHHTTT
T ss_pred CcccccHHHHHHHHHHhccccCCcc---hhhhccccccccccHHHHHHHHHHh
Confidence 4677888888877777776554432 3446778888888877776655443
|