Citrus Sinensis ID: 010134

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------
MRDVNTDLFDPRTEMDSDISRSASSSDGDFGFAFNDSNFSDRLLRIEIMGDPPESRSDGEGCTSIADWARDRKRRREDIKKDNGLDLSACPEEQILNQPDMDDCVGCENQDEEVEAMIEGSPSGDEAANGNESSWSMDCSTVVRVKTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDEWARAQYPRVEERREVLGSRLARFIRFPHMTCRKLKKVLTCNDFDHDVASKLVLEALFFKAEAPHRQRTLAAEESVTLNRRFVERAYKYRPVKVVEFERPRQQCVVYLDLKREECENLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSKPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMADDSLYFINGILHLRAELTIRH
ccccccccccccccccccccccccccccccEEEccccccccccEEEEEEccccccccccccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHcccccHHHHHccccccccccEEEEEccEEEEcHHHHHHcccHHHHHHHccccccccccEEEEEEccccHHHHHHHHHcEEccEEEcccccHHHHHHHHHccccHHHHHHHHHHHHHccccccHHHHHHHHHcHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccccccHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccEEEEEEEEEEcccccEEEEEcccccccccccccccccccEEEEcccEEEEcccccccccccEEEEEEEcccccccccEEEEEEEEEEcccccccccccccccEEEccccccccccccccccccEEEccccEEEccEEEEEEEEEEcc
ccccccccccccccccccccccccccccccEEEEccccccccEEEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccHHHcccccccccccccccccccEEEEEEccccccccccccccccccccEEEEEEEEEEccHHEEEcccHHHHHHHHcccccccccEEEEEEccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHcccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHEccccccHHHHHHHcccccccHHHHHHHHHHHHHHHcccHHHHHHHccccccHHHHHHHHHHHcccccEEEEEccccccEEEEEEccHHHHHHHcccccEEEEcEEcccccEEEEEEEccccccccEEEEEEEEEcccccEEEEEEEEEEEEEcccccEEEEEcccEEEccccccccccccccccHHHHcccccEEEccEEEEEEEEEEcc
mrdvntdlfdprtemdsdisrsasssdgdfgfafndsnfsdRLLRIEimgdppesrsdgegctsIADWARDRKRRREdikkdngldlsacpeeqilnqpdmddcvgcenQDEEVEAMiegspsgdeaangnesswsmdcsTVVRVKTLhisspilaakspfFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYsntlsttaaPALLDVLMAADKFEVASCMRYCSRllrnmpmtpeSALLYLelpssvlmgeavqPLTDAARQYLASRYKDMTKFQDEWARAQYPRVEERREVLGSRLARfirfphmtcRKLKKvltcndfdhDVASKLVLEALFFkaeaphrqrtlaaeESVTLNRRFVEraykyrpvkvveferprqqCVVYLDLKreecenlfpsgrvysqafhlggqgfflsahcnmdqqssfhcfglflgmqekgsvSFAVDYefaarskpteefvskykgnytftggkavgyrnlfaipwtsfmaddsLYFINGILHLRAELTIRH
mrdvntdlfdprtemdsdisrsasssdgdfgfAFNDSNFSDRLLRIEIMgdppesrsdgegctsiadwardrkrrredikkdngldlsacpeeqilnqpdMDDCVGCENQDEEVEAMIEGSPSGDEAANGNESSWSMDCSTVVRVKTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDEWaraqyprveerrEVLGSrlarfirfphmtCRKLKKVLTCNDFDHDVASKLVLEALFFKAeaphrqrtlaaeesvtlnrrfveraykyrpvkvveferprqQCVVYLDLKREECENLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAarskpteefvskyKGNYTFTGGKAVGYRNLFAIPWTSFMADDSLYFINGILHLRAELTIRH
MRDVNTDLFDPRTEMdsdisrsasssdgdfgfafndsnfsdRLLRIEIMGDPPESRSDGEGCTSIADWArdrkrrredikkdNGLDLSACPEEQILNQPDMDDCVGCENQDEEVEAMIEGSPSGDEAANGNESSWSMDCSTVVRVKTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDEWARAQYPRVEERREVLGSRLARFIRFPHMTCRKLKKVLTCNDFDHDVASKLVLEALFFKAEAPHRQRTLAAEESVTLNRRFVERAYKYRPVKVVEFERPRQQCVVYLDLKREECENLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSKPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMADDSLYFINGILHLRAELTIRH
*******************************FAFN***F*DRLLRI*****************************************************************************************SMDCSTVVRVKTLHISSPILAAKSPFFYKLFSNGM*****RHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDEWARAQYPRVEERREVLGSRLARFIRFPHMTCRKLKKVLTCNDFDHDVASKLVLEALFFKAEAPHRQRTLAAEESVTLNRRFVERAYKYRPVKVVEFERPRQQCVVYLDLKREECENLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSKPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMADDSLYFINGILHLRAELT***
****NTD*FDPRTE**************DFGFAFNDSNFSDRLLRIEIMG*******************************************************************************GNESSWSMDCSTVVRVKTLHISSPILAAKSPFFYKLFSNGMKESE**H**LRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDEWARAQYPRVEERREVLGSRLARFIRFPHMTCRKLKKVLTCNDFDHDVASKLVLEALFFK**************************YKYRPVKVVEFERPRQQCVVYLDLKREECENLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSKPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMADDSLYFINGILHLRAELTIR*
MRDVNTDLFDPRTE***********SDGDFGFAFNDSNFSDRLLRIEIMGDP*********CTSIADWARDRKRRREDIKKDNGLDLSACPEEQILNQPDMDDCVGCENQDEEVEAMIEG*************SWSMDCSTVVRVKTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDEWARAQYPRVEERREVLGSRLARFIRFPHMTCRKLKKVLTCNDFDHDVASKLVLEALFFKAEAPHRQRTLAAEESVTLNRRFVERAYKYRPVKVVEFERPRQQCVVYLDLKREECENLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSKPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMADDSLYFINGILHLRAELTIRH
*******LFDPRTEMDSDI*****SSDGDFGFAFNDSNFSDRLLRIEIMGDPP******************RKRRREDIKKDNGLDLSACPEEQILNQPDMDDCVGCENQDEEVEAMIEGSPS**********SWSMDCSTVVRVKTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDEWARAQYPRVEERREVLGSRLARFIRFPHMTCRKLKKVLTCNDFDHDVASKLVLEALFFKAEAPHRQRTLAAEESVTLNRRFVERAYKYRPVKVVEFERPRQQCVVYLDLKREECENLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSKPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMADDSLYFINGILHLRAELTIRH
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MRDVNTDLFDPRTEMDSDISRSASSSDGDFGFAFNDSNFSDRLLRIEIMGDPPESRSDGEGCTSIADWARDRKRRREDIKKDNGLDLSACPEEQILNQPDMDDCVGCENQDEEVEAMIEGSPSGDEAANGNESSWSMDCSTVVRVKTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDEWARAQYPRVEERREVLGSRLARFIRFPHMTCRKLKKVLTCNDFDHDVASKLVLEALFFKAEAPHRQRTLAAEESVTLNRRFVERAYKYRPVKVVEFERPRQQCVVYLDLKREECENLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSKPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMADDSLYFINGILHLRAELTIRH
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query517 2.2.26 [Sep-21-2011]
Q9FPW6561 BTB/POZ domain-containing yes no 0.990 0.912 0.78 0.0
O82343561 BTB/POZ domain-containing no no 0.988 0.910 0.773 0.0
O04615527 BTB/POZ domain-containing no no 0.934 0.916 0.551 1e-155
P28575 584 Actin-binding protein IPP yes no 0.437 0.386 0.221 1e-05
P34371410 BTB and MATH domain-conta yes no 0.371 0.468 0.244 7e-05
Q9P2N7 655 Kelch-like protein 13 OS= yes no 0.386 0.305 0.220 0.0001
A6QQY2 655 Kelch-like protein 13 OS= yes no 0.386 0.305 0.220 0.0001
Q8NFY9 601 Kelch repeat and BTB doma no no 0.249 0.214 0.255 0.0003
B1H285 575 Kelch repeat and BTB doma no no 0.249 0.224 0.248 0.0004
Q9QZ48 569 Zinc finger and BTB domai no no 0.177 0.161 0.319 0.0005
>sp|Q9FPW6|POB1_ARATH BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana GN=POB1 PE=2 SV=2 Back     alignment and function desciption
 Score =  879 bits (2271), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/550 (78%), Positives = 468/550 (85%), Gaps = 38/550 (6%)

Query: 5   NTDLFDPRTEMDSDISRSASSSDGDFGFAFNDSNFSDRLLRIEIMGDPPESRSDGEGCTS 64
           NTDLFDP+T+MD D +R  SSSDGDFGFAFNDSNFSDRLLRIEIMG P +SRS+ EGCTS
Sbjct: 7   NTDLFDPKTQMDPDFTRHGSSSDGDFGFAFNDSNFSDRLLRIEIMGGPSDSRSEVEGCTS 66

Query: 65  IADWARDRKRRREDIKKDNGL---DLSACPEEQILN--QPDMDDCVGCENQDEEV-EAMI 118
           IADWAR RKRRREDIKK++G+   D+ ACPEEQIL   QPDMD C G EN D+E  EAM+
Sbjct: 67  IADWARHRKRRREDIKKESGVTISDIVACPEEQILTDEQPDMDGCPGGENPDDEGGEAMV 126

Query: 119 EGSPSGDEAANGNESSWSMDCSTVVRVKTLHISSPILAAKSPFFYKLFSNGMKESEQRHV 178
           E + SGDE    +E +W MDCSTVVRVK LHISSPILAAKSPFFYKLFSNGM+ESEQRHV
Sbjct: 127 EEALSGDEEETSSEPNWGMDCSTVVRVKELHISSPILAAKSPFFYKLFSNGMRESEQRHV 186

Query: 179 ALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPM 238
            LRINASEEAALMELLNFMYSN +S T APALLDVLMAADKFEVASCMRYCSRLLRNMPM
Sbjct: 187 TLRINASEEAALMELLNFMYSNAVSVTTAPALLDVLMAADKFEVASCMRYCSRLLRNMPM 246

Query: 239 TPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDE--------------- 283
           TPESALLYLELPSSVLM +AVQPLTDAA+Q+LA+RYKD+TKF +E               
Sbjct: 247 TPESALLYLELPSSVLMAKAVQPLTDAAKQFLAARYKDITKFHEEVMSLPLAGIEAILSS 306

Query: 284 -----------------WARAQYPRVEERREVLGSRLARFIRFPHMTCRKLKKVLTCNDF 326
                            WARAQYP +EERRE+LGSRLA  IRFP MTCRKLKKVLTC+DF
Sbjct: 307 DELQIASEDAVYDFILKWARAQYPCLEERREILGSRLALSIRFPFMTCRKLKKVLTCSDF 366

Query: 327 DHDVASKLVLEALFFKAEAPHRQRTLAAEESVTLNRRFVERAYKYRPVKVVEFERPRQQC 386
           +H++ASKLVLEALFFKAEAPHRQR+LA+EES +LNRR +ERAYKYRPVKVVEFE PR QC
Sbjct: 367 EHEIASKLVLEALFFKAEAPHRQRSLASEESASLNRRLIERAYKYRPVKVVEFELPRPQC 426

Query: 387 VVYLDLKREECENLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGS 446
           VVYLDLKREEC  LFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGS
Sbjct: 427 VVYLDLKREECGGLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGS 486

Query: 447 VSFAVDYEFAARSKPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMADDSLYFINGI 506
           VSF VDYEF+ARSKP E+F+SKYKGNYTFTGGKAVGYRNLF +PWTSF+A+DS YFINGI
Sbjct: 487 VSFGVDYEFSARSKPAEDFISKYKGNYTFTGGKAVGYRNLFGVPWTSFIAEDSQYFINGI 546

Query: 507 LHLRAELTIR 516
           LHLRAELTI+
Sbjct: 547 LHLRAELTIK 556
May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
Arabidopsis thaliana (taxid: 3702)
>sp|O82343|Y2626_ARATH BTB/POZ domain-containing protein At2g46260 OS=Arabidopsis thaliana GN=At2g46260 PE=2 SV=2 Back     alignment and function description
>sp|O04615|Y4116_ARATH BTB/POZ domain-containing protein At4g01160 OS=Arabidopsis thaliana GN=At4g01160 PE=3 SV=1 Back     alignment and function description
>sp|P28575|IPP_MOUSE Actin-binding protein IPP OS=Mus musculus GN=Ipp PE=2 SV=3 Back     alignment and function description
>sp|P34371|BAT42_CAEEL BTB and MATH domain-containing protein 42 OS=Caenorhabditis elegans GN=bath-42 PE=1 SV=1 Back     alignment and function description
>sp|Q9P2N7|KLH13_HUMAN Kelch-like protein 13 OS=Homo sapiens GN=KLHL13 PE=1 SV=3 Back     alignment and function description
>sp|A6QQY2|KLH13_BOVIN Kelch-like protein 13 OS=Bos taurus GN=KLHL13 PE=2 SV=1 Back     alignment and function description
>sp|Q8NFY9|KBTB8_HUMAN Kelch repeat and BTB domain-containing protein 8 OS=Homo sapiens GN=KBTBD8 PE=2 SV=2 Back     alignment and function description
>sp|B1H285|KBTB8_RAT Kelch repeat and BTB domain-containing protein 8 OS=Rattus norvegicus GN=Kbtbd8 PE=2 SV=1 Back     alignment and function description
>sp|Q9QZ48|ZBT7A_RAT Zinc finger and BTB domain-containing protein 7A OS=Rattus norvegicus GN=Zbtb7a PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query517
255541774549 atpob1, putative [Ricinus communis] gi|2 1.0 0.941 0.837 0.0
224064139556 predicted protein [Populus trichocarpa] 1.0 0.929 0.830 0.0
224127832547 predicted protein [Populus trichocarpa] 0.990 0.936 0.823 0.0
225454420553 PREDICTED: BTB/POZ domain-containing pro 1.0 0.934 0.808 0.0
449432076553 PREDICTED: BTB/POZ domain-containing pro 0.998 0.933 0.806 0.0
307136357552 ATPOB protein binding [Cucumis melo subs 0.996 0.932 0.804 0.0
356573187553 PREDICTED: BTB/POZ domain-containing pro 0.998 0.933 0.797 0.0
356506034553 PREDICTED: BTB/POZ domain-containing pro 0.998 0.933 0.796 0.0
18412063561 POZ/BTB containin G-protein 1 [Arabidops 0.990 0.912 0.78 0.0
30695452561 POZ/BTB containin G-protein 1 [Arabidops 0.990 0.912 0.78 0.0
>gi|255541774|ref|XP_002511951.1| atpob1, putative [Ricinus communis] gi|223549131|gb|EEF50620.1| atpob1, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  956 bits (2470), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 460/549 (83%), Positives = 488/549 (88%), Gaps = 32/549 (5%)

Query: 1   MRDVNTDLFDPRTEMDSDISRSASSSDGDFGFAFNDSNFSDRLLRIEIMGDPPESRSDGE 60
           MR  N+DLFDPRTEM+S  SR ASSSDGDFGFAFNDSNFSDRLLRIEIM + P++R DGE
Sbjct: 1   MRGSNSDLFDPRTEMESVYSRGASSSDGDFGFAFNDSNFSDRLLRIEIMDESPDNRCDGE 60

Query: 61  GCTSIADWARDRKRRREDIKKDNGLDLSACPEEQILNQPDMDDCVGCENQDEEVEAMIEG 120
           GC SIADWAR RKRRREDIKKDN +++SA  EEQILNQPDM+DCVGCENQDE+  AMIE 
Sbjct: 61  GCNSIADWARHRKRRREDIKKDNAVEVSAGAEEQILNQPDMEDCVGCENQDEDAVAMIEE 120

Query: 121 SPSGDEAANGNESSWSMDCSTVVRVKTLHISSPILAAKSPFFYKLFSNGMKESEQRHVAL 180
            PSGDEA +GNES+WSMDCSTVVRVKTLHISSPILAAKSPFFYKLFSNGM+ESEQRHV L
Sbjct: 121 PPSGDEAVDGNESTWSMDCSTVVRVKTLHISSPILAAKSPFFYKLFSNGMRESEQRHVTL 180

Query: 181 RINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTP 240
           RINASEEAALMELLNFMYSN+LST  AP LLDVLMAADKFEVASCMRYCSR LRNM MTP
Sbjct: 181 RINASEEAALMELLNFMYSNSLSTNTAPGLLDVLMAADKFEVASCMRYCSRQLRNMSMTP 240

Query: 241 ESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDE----------------- 283
           ESALLYLELPSSVLM EAVQPLTDAA+QYLASRY+DMTK+Q+E                 
Sbjct: 241 ESALLYLELPSSVLMAEAVQPLTDAAKQYLASRYRDMTKYQEEVMSLPLAGIEAILSSDD 300

Query: 284 ---------------WARAQYPRVEERREVLGSRLARFIRFPHMTCRKLKKVLTCNDFDH 328
                          WAR QYP++EERREVLG+RLARFIRFP+MTCRKLKKVLTC+DFDH
Sbjct: 301 LQVASEDAVYDFVLKWARTQYPKLEERREVLGARLARFIRFPYMTCRKLKKVLTCSDFDH 360

Query: 329 DVASKLVLEALFFKAEAPHRQRTLAAEESVTLNRRFVERAYKYRPVKVVEFERPRQQCVV 388
           DVASKLVLEALFFKAEAPHRQR+LAAEES +LNRRFVERAYKYRPVKVVEFE PRQQCVV
Sbjct: 361 DVASKLVLEALFFKAEAPHRQRSLAAEESASLNRRFVERAYKYRPVKVVEFELPRQQCVV 420

Query: 389 YLDLKREECENLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVS 448
           YLDLKREEC NLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKG+VS
Sbjct: 421 YLDLKREECANLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGNVS 480

Query: 449 FAVDYEFAARSKPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMADDSLYFINGILH 508
           FAVDYEFAAR+KPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMADDSLYFING+LH
Sbjct: 481 FAVDYEFAARAKPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMADDSLYFINGVLH 540

Query: 509 LRAELTIRH 517
           LRAELTIRH
Sbjct: 541 LRAELTIRH 549

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224064139|ref|XP_002301391.1| predicted protein [Populus trichocarpa] gi|222843117|gb|EEE80664.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224127832|ref|XP_002320175.1| predicted protein [Populus trichocarpa] gi|222860948|gb|EEE98490.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225454420|ref|XP_002279915.1| PREDICTED: BTB/POZ domain-containing protein POB1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|449432076|ref|XP_004133826.1| PREDICTED: BTB/POZ domain-containing protein At2g46260-like [Cucumis sativus] gi|449480287|ref|XP_004155851.1| PREDICTED: BTB/POZ domain-containing protein At2g46260-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|307136357|gb|ADN34171.1| ATPOB protein binding [Cucumis melo subsp. melo] Back     alignment and taxonomy information
>gi|356573187|ref|XP_003554745.1| PREDICTED: BTB/POZ domain-containing protein POB1-like [Glycine max] Back     alignment and taxonomy information
>gi|356506034|ref|XP_003521793.1| PREDICTED: BTB/POZ domain-containing protein POB1-like [Glycine max] Back     alignment and taxonomy information
>gi|18412063|ref|NP_567115.1| POZ/BTB containin G-protein 1 [Arabidopsis thaliana] gi|12006855|gb|AAG44951.1|AF292397_1 POZ/BTB containing-protein AtPOB1 [Arabidopsis thaliana] gi|133778840|gb|ABO38760.1| At3g61600 [Arabidopsis thaliana] gi|332646709|gb|AEE80230.1| POZ/BTB containin G-protein 1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|30695452|ref|NP_850733.1| POZ/BTB containin G-protein 1 [Arabidopsis thaliana] gi|327488374|sp|Q9FPW6.2|POB1_ARATH RecName: Full=BTB/POZ domain-containing protein POB1; AltName: Full=POZ/BTB CONTAINING-PROTEIN 1; Short=AtPOB1 gi|332646708|gb|AEE80229.1| POZ/BTB containin G-protein 1 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query517
TAIR|locus:2082827561 POB1 "POZ/BTB containin G-prot 0.452 0.417 0.863 4.6e-209
TAIR|locus:2063026561 LRB1 "light-response BTB 1" [A 0.452 0.417 0.846 1.1e-205
UNIPROTKB|P34371410 bath-42 "BTB and MATH domain-c 0.375 0.473 0.255 1.6e-05
DICTYBASE|DDB_G0286387506 DDB_G0286387 "meprin and TRAF 0.212 0.217 0.278 0.00011
FB|FBgn0037978 575 KLHL18 [Drosophila melanogaste 0.313 0.281 0.231 0.00033
RGD|1311613335 Spop "speckle-type POZ protein 0.336 0.519 0.276 0.0005
MGI|MGI:3027903365 Tdpoz3 "TD and POZ domain cont 0.282 0.4 0.287 0.00058
UNIPROTKB|Q0VCW1374 SPOP "Speckle-type POZ protein 0.336 0.465 0.276 0.00061
UNIPROTKB|E2RS90374 SPOP "Uncharacterized protein" 0.336 0.465 0.276 0.00061
UNIPROTKB|O43791374 SPOP "Speckle-type POZ protein 0.336 0.465 0.276 0.00061
TAIR|locus:2082827 POB1 "POZ/BTB containin G-protein 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1096 (390.9 bits), Expect = 4.6e-209, Sum P(2) = 4.6e-209
 Identities = 202/234 (86%), Positives = 220/234 (94%)

Query:   283 EWARAQYPRVEERREVLGSRLARFIRFPHMTCRKLKKVLTCNDFDHDVASKLVLEALFFK 342
             +WARAQYP +EERRE+LGSRLA  IRFP MTCRKLKKVLTC+DF+H++ASKLVLEALFFK
Sbjct:   323 KWARAQYPCLEERREILGSRLALSIRFPFMTCRKLKKVLTCSDFEHEIASKLVLEALFFK 382

Query:   343 AEAPHRQRTLAAEESVTLNRRFVERAYKYRPVKVVEFERPRQQCVVYLDLKREECENLFP 402
             AEAPHRQR+LA+EES +LNRR +ERAYKYRPVKVVEFE PR QCVVYLDLKREEC  LFP
Sbjct:   383 AEAPHRQRSLASEESASLNRRLIERAYKYRPVKVVEFELPRPQCVVYLDLKREECGGLFP 442

Query:   403 SGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSKPT 462
             SGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSF VDYEF+ARSKP 
Sbjct:   443 SGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFGVDYEFSARSKPA 502

Query:   463 EEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMADDSLYFINGILHLRAELTIR 516
             E+F+SKYKGNYTFTGGKAVGYRNLF +PWTSF+A+DS YFINGILHLRAELTI+
Sbjct:   503 EDFISKYKGNYTFTGGKAVGYRNLFGVPWTSFIAEDSQYFINGILHLRAELTIK 556
GO:0005737 "cytoplasm" evidence=ISM
GO:0009954 "proximal/distal pattern formation" evidence=RCA
GO:0010227 "floral organ abscission" evidence=RCA
GO:0048439 "flower morphogenesis" evidence=RCA
GO:0005515 "protein binding" evidence=IPI
GO:0005634 "nucleus" evidence=IDA
GO:0010114 "response to red light" evidence=IGI
GO:0042803 "protein homodimerization activity" evidence=IPI
GO:0046982 "protein heterodimerization activity" evidence=IPI
TAIR|locus:2063026 LRB1 "light-response BTB 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P34371 bath-42 "BTB and MATH domain-containing protein 42" [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0286387 DDB_G0286387 "meprin and TRAF homology (MATH) domain-containing protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
FB|FBgn0037978 KLHL18 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
RGD|1311613 Spop "speckle-type POZ protein" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:3027903 Tdpoz3 "TD and POZ domain containing 3" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q0VCW1 SPOP "Speckle-type POZ protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2RS90 SPOP "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|O43791 SPOP "Speckle-type POZ protein" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FPW6POB1_ARATHNo assigned EC number0.780.99030.9126yesno
O82343Y2626_ARATHNo assigned EC number0.77310.98830.9108nono

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query517
smart0022597 smart00225, BTB, Broad-Complex, Tramtrack and Bric 5e-13
pfam00651101 pfam00651, BTB, BTB/POZ domain 4e-08
>gnl|CDD|197585 smart00225, BTB, Broad-Complex, Tramtrack and Bric a brac Back     alignment and domain information 
 Score = 64.6 bits (158), Expect = 5e-13
 Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 3/98 (3%)

Query: 138 DCSTVVRVKTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFM 197
           D + VV  K  H    +LAA SP+F  LFS+  KES++  +   ++         LLNF+
Sbjct: 1   DVTLVVGGKKFHAHKAVLAAHSPYFKALFSSDFKESDKSEI--YLDDVSPEDFRALLNFL 58

Query: 198 YSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRN 235
           Y+  L       + ++L  AD  ++   +  C   L  
Sbjct: 59  YTGKLDLPEEN-VEELLELADYLQIPGLVELCEEFLLK 95

Domain in Broad-Complex, Tramtrack and Bric a brac. Also known as POZ (poxvirus and zinc finger) domain. Known to be a protein-protein interaction motif found at the N-termini of several C2H2-type transcription factors as well as Shaw-type potassium channels. Known structure reveals a tightly intertwined dimer formed via interactions between N-terminal strand and helix structures. However in a subset of BTB/POZ domains, these two secondary structures appear to be missing. Be aware SMART predicts BTB/POZ domains without the beta1- and alpha1-secondary structures. Length = 97
>gnl|CDD|216043 pfam00651, BTB, BTB/POZ domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 517
KOG4441571 consensus Proteins containing BTB/POZ and Kelch do 100.0
PHA02713557 hypothetical protein; Provisional 100.0
PHA02790480 Kelch-like protein; Provisional 100.0
PHA03098534 kelch-like protein; Provisional 100.0
KOG4350 620 consensus Uncharacterized conserved protein, conta 99.94
KOG2075521 consensus Topoisomerase TOP1-interacting protein B 99.81
KOG4441571 consensus Proteins containing BTB/POZ and Kelch do 99.74
PF00651111 BTB: BTB/POZ domain; InterPro: IPR013069 The BTB ( 99.73
PHA02713557 hypothetical protein; Provisional 99.67
smart0022590 BTB Broad-Complex, Tramtrack and Bric a brac. Doma 99.62
PHA03098534 kelch-like protein; Provisional 99.57
KOG4682488 consensus Uncharacterized conserved protein, conta 99.57
KOG4591280 consensus Uncharacterized conserved protein, conta 99.55
KOG0783 1267 consensus Uncharacterized conserved protein, conta 99.49
PHA02790480 Kelch-like protein; Provisional 99.4
TIGR03548323 mutarot_permut cyclically-permuted mutatrotase fam 99.33
TIGR03547346 muta_rot_YjhT mutatrotase, YjhT family. Members of 99.28
TIGR03548323 mutarot_permut cyclically-permuted mutatrotase fam 99.24
TIGR03547346 muta_rot_YjhT mutatrotase, YjhT family. Members of 99.23
PLN02153341 epithiospecifier protein 99.2
PLN02153341 epithiospecifier protein 99.19
PLN02193470 nitrile-specifier protein 99.16
PRK14131376 N-acetylneuraminic acid mutarotase; Provisional 99.11
KOG4693392 consensus Uncharacterized conserved protein, conta 99.03
PRK14131376 N-acetylneuraminic acid mutarotase; Provisional 98.98
PLN02193 470 nitrile-specifier protein 98.95
PF07707103 BACK: BTB And C-terminal Kelch; InterPro: IPR01170 98.85
smart00875101 BACK BTB And C-terminal Kelch. The BACK domain is 98.44
KOG0511516 consensus Ankyrin repeat protein [General function 98.42
KOG4693 392 consensus Uncharacterized conserved protein, conta 98.4
KOG0783 1267 consensus Uncharacterized conserved protein, conta 98.12
KOG2838401 consensus Uncharacterized conserved protein, conta 97.94
KOG1987297 consensus Speckle-type POZ protein SPOP and relate 97.86
KOG1230 521 consensus Protein containing repeated kelch motifs 97.85
KOG2838401 consensus Uncharacterized conserved protein, conta 97.84
PF1396450 Kelch_6: Kelch motif 97.73
PF0134447 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is 97.61
KOG0379 482 consensus Kelch repeat-containing proteins [Genera 97.61
KOG0379 482 consensus Kelch repeat-containing proteins [Genera 97.5
KOG4152 830 consensus Host cell transcription factor HCFC1 [Ce 97.47
PF11822317 DUF3342: Domain of unknown function (DUF3342); Int 97.43
KOG2716230 consensus Polymerase delta-interacting protein PDI 97.26
PF0221494 BTB_2: BTB/POZ domain; InterPro: IPR003131 Potassi 96.99
KOG3473112 consensus RNA polymerase II transcription elongati 96.68
PF0764649 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is 96.49
smart00512104 Skp1 Found in Skp1 protein family. Family of Skp1 95.94
COG3055 381 Uncharacterized protein conserved in bacteria [Fun 95.64
smart0061247 Kelch Kelch domain. 95.45
KOG1230 521 consensus Protein containing repeated kelch motifs 95.34
PF1341849 Kelch_4: Galactose oxidase, central domain; PDB: 2 95.17
KOG1665302 consensus AFH1-interacting protein FIP2, contains 94.07
KOG0511516 consensus Ankyrin repeat protein [General function 93.43
KOG2714465 consensus SETA binding protein SB1 and related pro 92.98
KOG1724162 consensus SCF ubiquitin ligase, Skp1 component [Po 92.75
smart0061247 Kelch Kelch domain. 92.45
PF0393162 Skp1_POZ: Skp1 family, tetramerisation domain; Int 92.43
PF1385442 Kelch_5: Kelch motif 92.02
KOG4152 830 consensus Host cell transcription factor HCFC1 [Ce 91.95
COG3055 381 Uncharacterized protein conserved in bacteria [Fun 90.74
PF0134447 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is 89.33
PF1341549 Kelch_3: Galactose oxidase, central domain 88.74
PF0146678 Skp1: Skp1 family, dimerisation domain; InterPro: 87.28
PF1396450 Kelch_6: Kelch motif 87.14
PF1341549 Kelch_3: Galactose oxidase, central domain 86.81
KOG1778319 consensus CREB binding protein/P300 and related TA 86.44
PLN02772 398 guanylate kinase 84.15
COG5201158 SKP1 SCF ubiquitin ligase, SKP1 component [Posttra 83.99
PF03089 337 RAG2: Recombination activating protein 2; InterPro 83.03
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] Back     alignment and domain information 
Probab=100.00  E-value=4.6e-60  Score=515.31  Aligned_cols=350  Identities=20%  Similarity=0.338  Sum_probs=315.5

Q ss_pred             CCCCCcccEEEEE--EEEEeehhhhcccCHHHHHhhcCCCCCCcceeEEEccCCCCHHHHHHHHhccccceeecCCcccH
Q 010134          133 SSWSMDCSTVVRV--KTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPAL  210 (517)
Q Consensus       133 ~~~~~~~DV~l~v--~~f~aHr~ILaa~S~yF~amf~~~~~Es~~~~I~l~~~~~~~~~f~~lL~fiYTg~l~i~~~~~v  210 (517)
                      +..+.+|||+|.+  ++|+|||.||||+||||++||+++|+|+.+++|+|.  ++++.+++.+|+|+|||++.|+. +||
T Consensus        31 r~~~~lcDv~L~v~~~~~~aHR~VLAa~S~YFraMFt~~l~e~~~~~i~l~--~v~~~~l~~ll~y~Yt~~i~i~~-~nV  107 (571)
T KOG4441|consen   31 REEGLLCDVTLLVGDREFPAHRVVLAACSPYFRAMFTSGLKESKQKEINLE--GVDPETLELLLDYAYTGKLEISE-DNV  107 (571)
T ss_pred             HHhCCCceEEEEECCeeechHHHHHHhccHHHHHHhcCCcccccceEEEEe--cCCHHHHHHHHHHhhcceEEech-HhH
Confidence            4455699999999  799999999999999999999999999999999999  89999999999999999999999 999


Q ss_pred             HHHHHHHhhcCchhHHHHHHHHhhCCCCChhhHHHHHHhccccccccChHHHHHHHHHHHHHHHHHHhhccHH-------
Q 010134          211 LDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDE-------  283 (517)
Q Consensus       211 ~~lL~aAd~~~v~~L~~~C~~~L~~~~l~~~n~~~~l~lA~~~~~a~~~~~L~~~~~~fi~~nf~~v~~f~ee-------  283 (517)
                      ++||.+|++|||+.+++.|++||.+ +|+++||+.+..||+.|    .|.+|.+.+..|+..||.++.+ ++|       
T Consensus       108 q~ll~aA~~lQi~~v~~~C~~fL~~-~l~~~Nclgi~~~a~~~----~~~~L~~~a~~~i~~~F~~v~~-~eefl~L~~~  181 (571)
T KOG4441|consen  108 QELLEAASLLQIPEVVDACCEFLES-QLDPSNCLGIRRFAELH----SCTELLEVADEYILQHFAEVSK-TEEFLLLSLE  181 (571)
T ss_pred             HHHHHHHHHhhhHHHHHHHHHHHHh-cCCHHHHHHHHHHHHhc----CcHHHHHHHHHHHHHHHHHHhc-cHHhhCCCHH
Confidence            9999999999999999999999999 99999999999999999    6999999999999999999998 655       


Q ss_pred             -------------------------HHHhcCCChHHHHHHHHhhhcccccCCCCCHHHHHhhcccCCCC--ChhHHHHHH
Q 010134          284 -------------------------WARAQYPRVEERREVLGSRLARFIRFPHMTCRKLKKVLTCNDFD--HDVASKLVL  336 (517)
Q Consensus       284 -------------------------Wi~~~~~~~~~R~~~l~~~Ll~~VRf~lms~~~L~~~~~~~~l~--~~~~~~ll~  336 (517)
                                               |++|   +.+.|.+++ ++|+++||||+|++.+|.+.+...++.  +..|+.+|.
T Consensus       182 ~l~~ll~~d~l~v~~E~~vf~a~~~Wv~~---d~~~R~~~~-~~ll~~vr~~ll~~~~l~~~v~~~~~~~~~~~c~~~l~  257 (571)
T KOG4441|consen  182 ELIGLLSSDDLNVDSEEEVFEAAMRWVKH---DFEEREEHL-PALLEAVRLPLLPPQFLVEIVESEPLIKRDSACRDLLD  257 (571)
T ss_pred             HHHhhccccCCCcCCHHHHHHHHHHHHhc---CHhhHHHHH-HHHHHhcCccCCCHHHHHHHHhhhhhhccCHHHHHHHH
Confidence                                     9999   788899999 699999999999999999998887765  568999999


Q ss_pred             HHHHhhhccchhhcccccccccccccc-ccccccccccc-------ceEEEecCCCCceee---cCCCccceeeEeeCCe
Q 010134          337 EALFFKAEAPHRQRTLAAEESVTLNRR-FVERAYKYRPV-------KVVEFERPRQQCVVY---LDLKREECENLFPSGR  405 (517)
Q Consensus       337 eAl~y~~~~~~~q~~~~~~~~~p~~R~-~~~~i~v~g~~-------~~v~~y~p~~~~W~~---l~~~r~~~~~a~~~g~  405 (517)
                      +|++||.. +..++.+++++++|  |+ ..+.++++|+.       ..+++|||..+.|..   |+.+|.++++++++|.
T Consensus       258 ea~~~~~~-~~~~~~~~~~~t~~--r~~~~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~~~~  334 (571)
T KOG4441|consen  258 EAKKYHLL-PQRRPVMQSPRTRP--RRSVSGKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRCRVGVAVLNGK  334 (571)
T ss_pred             HHHHHhhC-cccCccccCCCccc--CcCCCCeEEEECCCCCCCcccceeEEecCCcCcEeecCCCCcccccccEEEECCE
Confidence            99999986 56667789999999  84 45778876553       679999999999999   8888999999999999


Q ss_pred             eeeeeeeeccce--eccccce---------e-----cccCccceEEEEECCee-------ccCCcccccccCcceeeCc-
Q 010134          406 VYSQAFHLGGQG--FFLSAHC---------N-----MDQQSSFHCFGLFLGMQ-------EKGSVSFAVDYEFAARSKP-  461 (517)
Q Consensus       406 iY~~~fviGG~~--~~~~~~~---------~-----m~~~R~~~~~~~~~g~i-------~~~~l~s~V~~~~~E~ydp-  461 (517)
                      ||    ++||+.  ....+.+         |     |+++|..+++++++|+|       +...+++ |     |+||| 
T Consensus       335 lY----v~GG~~~~~~~l~~ve~YD~~~~~W~~~a~M~~~R~~~~v~~l~g~iYavGG~dg~~~l~s-v-----E~YDp~  404 (571)
T KOG4441|consen  335 LY----VVGGYDSGSDRLSSVERYDPRTNQWTPVAPMNTKRSDFGVAVLDGKLYAVGGFDGEKSLNS-V-----ECYDPV  404 (571)
T ss_pred             EE----EEccccCCCcccceEEEecCCCCceeccCCccCccccceeEEECCEEEEEecccccccccc-E-----EEecCC
Confidence            99    999984  2333333         4     99999999999999999       3445667 5     99999 


Q ss_pred             --cceeccCCCcc------------eEEEccccCCC---ceEEEe-e----ccee-------------EeCCEEEEEcCc
Q 010134          462 --TEEFVSKYKGN------------YTFTGGKAVGY---RNLFAI-P----WTSF-------------MADDSLYFINGI  506 (517)
Q Consensus       462 --~W~~v~~l~~~------------iYv~GG~~~~~---~~v~~Y-P----W~~~-------------~~~~~iYviGG~  506 (517)
                        +|+.++||+.+            ||++||.++..   ++|+|| |    |+.+             +++|+||++||.
T Consensus       405 ~~~W~~va~m~~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g~a~~~~~iYvvGG~  484 (571)
T KOG4441|consen  405 TNKWTPVAPMLTRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRSGFGVAVLNGKIYVVGGF  484 (571)
T ss_pred             CCcccccCCCCcceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCCceeecCCcccccccceEEEECCEEEEECCc
Confidence              99999999875            99999988765   899999 9    9987             999999999998


Q ss_pred             cc
Q 010134          507 LH  508 (517)
Q Consensus       507 ~~  508 (517)
                      ..
T Consensus       485 ~~  486 (571)
T KOG4441|consen  485 DG  486 (571)
T ss_pred             cC
Confidence            65

>PHA02713 hypothetical protein; Provisional Back     alignment and domain information
>PHA02790 Kelch-like protein; Provisional Back     alignment and domain information
>PHA03098 kelch-like protein; Provisional Back     alignment and domain information
>KOG4350 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] Back     alignment and domain information
>KOG2075 consensus Topoisomerase TOP1-interacting protein BTBD1 [Function unknown] Back     alignment and domain information
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] Back     alignment and domain information
>PF00651 BTB: BTB/POZ domain; InterPro: IPR013069 The BTB (for BR-C, ttk and bab) [] or POZ (for Pox virus and Zinc finger) [] domain is present near the N terminus of a fraction of zinc finger (IPR007087 from INTERPRO) proteins and in proteins that contain the IPR006652 from INTERPRO motif such as Kelch and a family of pox virus proteins Back     alignment and domain information
>PHA02713 hypothetical protein; Provisional Back     alignment and domain information
>smart00225 BTB Broad-Complex, Tramtrack and Bric a brac Back     alignment and domain information
>PHA03098 kelch-like protein; Provisional Back     alignment and domain information
>KOG4682 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] Back     alignment and domain information
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] Back     alignment and domain information
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown] Back     alignment and domain information
>PHA02790 Kelch-like protein; Provisional Back     alignment and domain information
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein Back     alignment and domain information
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family Back     alignment and domain information
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein Back     alignment and domain information
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family Back     alignment and domain information
>PLN02153 epithiospecifier protein Back     alignment and domain information
>PLN02153 epithiospecifier protein Back     alignment and domain information
>PLN02193 nitrile-specifier protein Back     alignment and domain information
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional Back     alignment and domain information
>KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] Back     alignment and domain information
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional Back     alignment and domain information
>PLN02193 nitrile-specifier protein Back     alignment and domain information
>PF07707 BACK: BTB And C-terminal Kelch; InterPro: IPR011705 This domain is found associated with (IPR000210 from INTERPRO) and (IPR006652 from INTERPRO) Back     alignment and domain information
>smart00875 BACK BTB And C-terminal Kelch Back     alignment and domain information
>KOG0511 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] Back     alignment and domain information
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown] Back     alignment and domain information
>KOG2838 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] Back     alignment and domain information
>KOG1987 consensus Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains [Cell cycle control, cell division, chromosome partitioning; General function prediction only] Back     alignment and domain information
>KOG1230 consensus Protein containing repeated kelch motifs [General function prediction only] Back     alignment and domain information
>KOG2838 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] Back     alignment and domain information
>PF13964 Kelch_6: Kelch motif Back     alignment and domain information
>PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>KOG0379 consensus Kelch repeat-containing proteins [General function prediction only] Back     alignment and domain information
>KOG0379 consensus Kelch repeat-containing proteins [General function prediction only] Back     alignment and domain information
>KOG4152 consensus Host cell transcription factor HCFC1 [Cell cycle control, cell division, chromosome partitioning; Transcription] Back     alignment and domain information
>PF11822 DUF3342: Domain of unknown function (DUF3342); InterPro: IPR021777 This family of proteins are functionally uncharacterised Back     alignment and domain information
>KOG2716 consensus Polymerase delta-interacting protein PDIP1 and related proteins, contain BTB/POZ domain [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF02214 BTB_2: BTB/POZ domain; InterPro: IPR003131 Potassium channels are the most diverse group of the ion channel family [, ] Back     alignment and domain information
>KOG3473 consensus RNA polymerase II transcription elongation factor Elongin/SIII, subunit elongin C [Transcription] Back     alignment and domain information
>PF07646 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>smart00512 Skp1 Found in Skp1 protein family Back     alignment and domain information
>COG3055 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>smart00612 Kelch Kelch domain Back     alignment and domain information
>KOG1230 consensus Protein containing repeated kelch motifs [General function prediction only] Back     alignment and domain information
>PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B Back     alignment and domain information
>KOG1665 consensus AFH1-interacting protein FIP2, contains BTB/POZ domain and pentapeptide repeats [General function prediction only] Back     alignment and domain information
>KOG0511 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>KOG2714 consensus SETA binding protein SB1 and related proteins, contain BTB/POZ domain [General function prediction only] Back     alignment and domain information
>KOG1724 consensus SCF ubiquitin ligase, Skp1 component [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>smart00612 Kelch Kelch domain Back     alignment and domain information
>PF03931 Skp1_POZ: Skp1 family, tetramerisation domain; InterPro: IPR016073 SKP1 (together with SKP2) was identified as an essential component of the cyclin A-CDK2 S phase kinase complex [] Back     alignment and domain information
>PF13854 Kelch_5: Kelch motif Back     alignment and domain information
>KOG4152 consensus Host cell transcription factor HCFC1 [Cell cycle control, cell division, chromosome partitioning; Transcription] Back     alignment and domain information
>COG3055 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>PF13415 Kelch_3: Galactose oxidase, central domain Back     alignment and domain information
>PF01466 Skp1: Skp1 family, dimerisation domain; InterPro: IPR016072 SKP1 (together with SKP2) was identified as an essential component of the cyclin A-CDK2 S phase kinase complex [] Back     alignment and domain information
>PF13964 Kelch_6: Kelch motif Back     alignment and domain information
>PF13415 Kelch_3: Galactose oxidase, central domain Back     alignment and domain information
>KOG1778 consensus CREB binding protein/P300 and related TAZ Zn-finger proteins [Transcription] Back     alignment and domain information
>PLN02772 guanylate kinase Back     alignment and domain information
>COG5201 SKP1 SCF ubiquitin ligase, SKP1 component [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF03089 RAG2: Recombination activating protein 2; InterPro: IPR004321 The variable portion of the genes encoding immunoglobulins and T cell receptors are assembled from component V, D, and J DNA segments by a site-specific recombination reaction termed V(D)J recombination Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query517
3hqi_A312 Structures Of Spop-Substrate Complexes: Insights In 4e-05
4eoz_A145 Crystal Structure Of The Spop Btb Domain Complexed 7e-05
2nn2_A133 Crystal Structure Of The Btb Domain From The LrfZBT 5e-04
2if5_A120 Structure Of The Poz Domain Of Human Lrf, A Master 7e-04
>pdb|3HQI|A Chain A, Structures Of Spop-Substrate Complexes: Insights Into Molecular Architectures Of Btb-Cul3 Ubiquitin Ligases: SpopmathxBTB3-Box-Pucsbc1 Length = 312 Back     alignment and structure 
Iteration: 1

 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 58/129 (44%), Gaps = 12/129 (9%)
Query: 124 GDEAANGNESSWSMDCSTVVRVKTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRIN 183
            DE     E+S   DC   V  +       ILAA+SP F  +F + M+ES++  V   IN
Sbjct: 162 ADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRV--EIN 219
Query: 184 ASEEAALMELLNFMYSNTLSTTAAPAL----LDVLMAADKFEVASCMRYC-SRLLRNMPM 238
             E     E++ F+Y     T  AP L     D+L AADK+ +      C   L  N+ +
Sbjct: 220 DVEPEVFKEMMCFIY-----TGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSV 274
Query: 239 TPESALLYL 247
              + +L L
Sbjct: 275 ENAAEILIL 283
>pdb|4EOZ|A Chain A, Crystal Structure Of The Spop Btb Domain Complexed With The Cul3 N- Terminal Domain Length = 145 Back     alignment and structure
>pdb|2NN2|A Chain A, Crystal Structure Of The Btb Domain From The LrfZBTB7 Transcriptional Regulator Length = 133 Back     alignment and structure
>pdb|2IF5|A Chain A, Structure Of The Poz Domain Of Human Lrf, A Master Regulator Of Oncogenesis Length = 120 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query517
4eoz_A145 Speckle-type POZ protein; E3 ubiquitin ligase, nuc 3e-12
3htm_A172 Speckle-type POZ protein; BTB, SPOP, ubiquitin, li 5e-12
2if5_A120 Zinc finger and BTB domain-containing protein 7A; 5e-12
3i3n_A279 Kelch-like protein 11; structural genomics, BTB, K 1e-11
3hqi_A312 Speckle-type POZ protein; SPOP, ubiquitin, puckere 2e-11
1r29_A127 B-cell lymphoma 6 protein; BTB domain, transcripti 9e-11
2vkp_A109 BTB/POZ domain-containing protein 6; protein-bindi 1e-10
2vpk_A116 Myoneurin; transcription regulation, transcription 6e-10
2ppi_A144 Gigaxonin; BTB domain, protein degradation, struct 2e-09
3ohu_A125 Transcription regulator protein BACH2; BTB/POZ dom 2e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-09
3b84_A119 Zinc finger and BTB domain-containing protein 48; 3e-09
2yy9_A135 Zinc finger and BTB domain-containing protein 48; 4e-09
1buo_A121 POZ domain, protein (promyelocytic leukemia zinc f 5e-09
2ihc_A124 Transcription regulator protein BACH1; BRIC-A-BRAC 9e-09
3ga1_A129 Nucleus accumbens-associated protein 1; BTB/POZ do 2e-08
2z8h_A138 Transcription regulator protein BACH1; BTB, POZ, d 2e-08
3hve_A256 Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, dis 3e-08
3fkc_A116 Transcriptional regulator kaiso; zinc finger and B 3e-07
2q81_A119 MIZ-1 protein; BTB/POZ domain, transcription; HET: 3e-07
3m5b_A119 Zinc finger and BTB domain-containing protein 32; 5e-06
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens} Length = 145 Back     alignment and structure
 Score = 63.3 bits (155), Expect = 3e-12
 Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 4/96 (4%)

Query: 154 ILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDV 213
           ILAA+SP F  +F + M+ES++  V   IN  E     E++ F+Y+         A  D+
Sbjct: 43  ILAARSPVFSAMFEHEMEESKKNRV--EINDVEPEVFKEMMCFIYTGKAPNLDKMA-DDL 99

Query: 214 LMAADKFEVASCMRYCSRLLRNMPMTPESALLYLEL 249
           L AADK+ +      C   L +  ++ E+A   L L
Sbjct: 100 LAAADKYALERLKVMCEDALCSN-LSVENAAEILIL 134
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens} Length = 172 Back     alignment and structure
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A Length = 120 Back     alignment and structure
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} Length = 279 Back     alignment and structure
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A Length = 312 Back     alignment and structure
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A Length = 127 Back     alignment and structure
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens} Length = 109 Back     alignment and structure
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens} Length = 116 Back     alignment and structure
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} Length = 144 Back     alignment and structure
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} PDB: 3ohv_A Length = 125 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens} Length = 119 Back     alignment and structure
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus} Length = 135 Back     alignment and structure
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A Length = 121 Back     alignment and structure
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens} Length = 124 Back     alignment and structure
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens} Length = 129 Back     alignment and structure
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus} Length = 138 Back     alignment and structure
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B Length = 256 Back     alignment and structure
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A Length = 116 Back     alignment and structure
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A Length = 119 Back     alignment and structure
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} Length = 119 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query517
3i3n_A279 Kelch-like protein 11; structural genomics, BTB, K 100.0
3hve_A256 Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, dis 100.0
3hqi_A312 Speckle-type POZ protein; SPOP, ubiquitin, puckere 99.97
3htm_A172 Speckle-type POZ protein; BTB, SPOP, ubiquitin, li 99.96
4eoz_A145 Speckle-type POZ protein; E3 ubiquitin ligase, nuc 99.92
2if5_A120 Zinc finger and BTB domain-containing protein 7A; 99.88
2vkp_A109 BTB/POZ domain-containing protein 6; protein-bindi 99.87
1r29_A127 B-cell lymphoma 6 protein; BTB domain, transcripti 99.87
2z8h_A138 Transcription regulator protein BACH1; BTB, POZ, d 99.87
2ppi_A144 Gigaxonin; BTB domain, protein degradation, struct 99.86
3b84_A119 Zinc finger and BTB domain-containing protein 48; 99.86
2yy9_A135 Zinc finger and BTB domain-containing protein 48; 99.86
2vpk_A116 Myoneurin; transcription regulation, transcription 99.85
1buo_A121 POZ domain, protein (promyelocytic leukemia zinc f 99.85
2ihc_A124 Transcription regulator protein BACH1; BRIC-A-BRAC 99.84
3ohu_A125 Transcription regulator protein BACH2; BTB/POZ dom 99.84
3m5b_A119 Zinc finger and BTB domain-containing protein 32; 99.84
2q81_A119 MIZ-1 protein; BTB/POZ domain, transcription; HET: 99.83
3ga1_A129 Nucleus accumbens-associated protein 1; BTB/POZ do 99.82
3fkc_A116 Transcriptional regulator kaiso; zinc finger and B 99.76
3ii7_A306 Kelch-like protein 7; protein-binding, kelch-repea 99.58
2xn4_A302 Kelch-like protein 2; structural protein, cytoskel 99.57
2vpj_A301 Kelch-like protein 12; adaptor protein, WNT signal 99.55
4asc_A315 Kelch repeat and BTB domain-containing protein 5; 99.51
3ii7_A306 Kelch-like protein 7; protein-binding, kelch-repea 99.51
1zgk_A308 Kelch-like ECH-associated protein 1; beta-propelle 99.5
1zgk_A308 Kelch-like ECH-associated protein 1; beta-propelle 99.5
2xn4_A302 Kelch-like protein 2; structural protein, cytoskel 99.49
4asc_A315 Kelch repeat and BTB domain-containing protein 5; 99.47
2vpj_A301 Kelch-like protein 12; adaptor protein, WNT signal 99.46
2ast_A159 S-phase kinase-associated protein 1A; SCF-substrat 99.46
2woz_A318 Kelch repeat and BTB domain-containing protein 10; 99.46
2woz_A318 Kelch repeat and BTB domain-containing protein 10; 99.46
2zwa_A695 Leucine carboxyl methyltransferase 2; HET: SAH CIT 99.33
2uvk_A357 YJHT; unknown function, hypothetical protein, sial 99.3
2uvk_A357 YJHT; unknown function, hypothetical protein, sial 99.23
4ajy_C97 Transcription elongation factor B polypeptide 1; E 99.23
1fs1_B141 SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, le 99.03
2p1m_A160 SKP1-like protein 1A; F-BOX, leucine rich repeat, 99.02
2zwa_A695 Leucine carboxyl methyltransferase 2; HET: SAH CIT 98.93
2eqx_A105 Kelch repeat and BTB domain-containing protein 4; 98.92
1k3i_A 656 Galactose oxidase precursor; blade beta propeller, 98.83
1k3i_A 656 Galactose oxidase precursor; blade beta propeller, 98.58
1hv2_A99 Elongin C, ELC1; protein-peptide complex, signalin 98.38
2fnj_C96 Transcription elongation factor B polypeptide 1; b 98.32
3v7d_A169 Suppressor of kinetochore protein 1; WD 40 domain, 98.24
3drz_A107 BTB/POZ domain-containing protein KCTD5; potassium 98.04
1vcb_B112 Protein (elongin C); tumor suppressor, cancer, ubi 97.76
3drx_A202 BTB/POZ domain-containing protein KCTD5; golgi, gr 96.86
3kvt_A115 Potassium channel protein SHAW; tetramerization do 94.43
1s1g_A124 Potassium voltage-gated channel subfamily D membe; 94.19
1nn7_A105 Potassium channel KV4.2; teteramerization domain, 92.39
2nz0_B140 Potassium voltage-gated channel subfamily D membe; 92.17
1t1d_A100 Protein (potassium channel KV1.1); potassium chann 91.96
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A Back     alignment and structure
Probab=100.00  E-value=1.7e-36  Score=303.18  Aligned_cols=208  Identities=19%  Similarity=0.353  Sum_probs=181.3

Q ss_pred             hHHhhhhcCCCCCcccEEEEEE-----EEEeehhhhcccCHHHHHhhcCCCCCCcceeEEEcc----CCCCHHHHHHHHh
Q 010134          125 DEAANGNESSWSMDCSTVVRVK-----TLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRI----NASEEAALMELLN  195 (517)
Q Consensus       125 ~~l~~l~~~~~~~~~DV~l~v~-----~f~aHr~ILaa~S~yF~amf~~~~~Es~~~~I~l~~----~~~~~~~f~~lL~  195 (517)
                      +.+.+++.++  .+|||+|.|+     +|+|||+|||++|+||++||+++|+|+.+.+|+|+.    +++++++|+.+|+
T Consensus        21 ~~l~~l~~~~--~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~~~~f~~ll~   98 (279)
T 3i3n_A           21 WRQNEQRRQG--LFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPEPDTVEAVIE   98 (279)
T ss_dssp             HHHHHHHHHT--TTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCSCHHHHHHHHH
T ss_pred             HHHHHHHhcC--CCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCCCHHHHHHHHH
Confidence            4455555554  4799999983     899999999999999999999999999999999972    2689999999999


Q ss_pred             ccccceeecCCcccHHHHHHHHhhcCchhHHHHHHHHhhCCCCChhhHHHHHHhccccccccChHHHHHHHHHHHHHHHH
Q 010134          196 FMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYK  275 (517)
Q Consensus       196 fiYTg~l~i~~~~~v~~lL~aAd~~~v~~L~~~C~~~L~~~~l~~~n~~~~l~lA~~~~~a~~~~~L~~~~~~fi~~nf~  275 (517)
                      |+|||++.++. +++.+|+.+|++|+++.|++.|++||.+ .++++||+.++.+|+.|    ++..|.+.|.+||.+||.
T Consensus        99 ~~Ytg~~~i~~-~~v~~ll~~A~~l~i~~L~~~c~~~L~~-~l~~~n~~~i~~~A~~~----~~~~L~~~~~~~i~~~f~  172 (279)
T 3i3n_A           99 YMYTGRIRVST-GSVHEVLELADRFLLIRLKEFCGEFLKK-KLHLSNCVAIHSLAHMY----TLSQLALKAADMIRRNFH  172 (279)
T ss_dssp             HHHHSEEEEET-TTHHHHHHHHHHTTCHHHHHHHHHHHHH-HCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHHHTHH
T ss_pred             hhCcCCcccCH-HHHHHHHHHHHHHCcHHHHHHHHHHHHH-cCCcchHHHHHHHHHHc----CcHHHHHHHHHHHHHHHH
Confidence            99999999999 8999999999999999999999999999 99999999999999999    689999999999999999


Q ss_pred             HHhhccHH--------------------------------HHHhcCCChHHHHHHHHhhhcccccCCCCCHHHHHhhccc
Q 010134          276 DMTKFQDE--------------------------------WARAQYPRVEERREVLGSRLARFIRFPHMTCRKLKKVLTC  323 (517)
Q Consensus       276 ~v~~f~ee--------------------------------Wi~~~~~~~~~R~~~l~~~Ll~~VRf~lms~~~L~~~~~~  323 (517)
                      ++.+ +++                                |++|   ++++|.+++ .+||++||||+|++.+|.+.++.
T Consensus       173 ~v~~-~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf~av~~W~~~---~~~~r~~~~-~~ll~~VRf~l~~~~~L~~~v~~  247 (279)
T 3i3n_A          173 KVIQ-DEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQR---NAEERERYF-EELFKLLRLSQMKPTYLTRHVKP  247 (279)
T ss_dssp             HHTT-SSGGGGSCHHHHHHHHTCSSCCCSCHHHHHHHHHHHHHT---THHHHTTTH-HHHHTTSCGGGSCHHHHHHTTTT
T ss_pred             HHhc-CcChhcCCHHHHHHHhcCcCCCCCCHHHHHHHHHHHHHc---CHHHHHHHH-HHHHHhcCCCCCCHHHHHHHhhc
Confidence            9987 433                                9999   788999999 69999999999999999999887


Q ss_pred             CCCC--ChhHHHHHHHHHHhhhcc
Q 010134          324 NDFD--HDVASKLVLEALFFKAEA  345 (517)
Q Consensus       324 ~~l~--~~~~~~ll~eAl~y~~~~  345 (517)
                      +++.  ++.|.++|.+|+.||..+
T Consensus       248 ~~l~~~~~~c~~~l~ea~~~~~~~  271 (279)
T 3i3n_A          248 ERLVANNEVCVKLVADAVERHALR  271 (279)
T ss_dssp             SHHHHTCHHHHHHHHHHHHHHHHT
T ss_pred             cchhcCCHHHHHHHHHHHHhccCc
Confidence            7765  567999999999999864
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B Back     alignment and structure
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A Back     alignment and structure
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens} Back     alignment and structure
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens} Back     alignment and structure
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A Back     alignment and structure
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens} Back     alignment and structure
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A Back     alignment and structure
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus} Back     alignment and structure
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} Back     alignment and structure
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens} Back     alignment and structure
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus} Back     alignment and structure
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens} Back     alignment and structure
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A Back     alignment and structure
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens} Back     alignment and structure
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A Back     alignment and structure
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0 Back     alignment and structure
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A Back     alignment and structure
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens} Back     alignment and structure
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A Back     alignment and structure
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Back     alignment and structure
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Back     alignment and structure
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Back     alignment and structure
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Back     alignment and structure
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Back     alignment and structure
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Back     alignment and structure
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Back     alignment and structure
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Back     alignment and structure
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Back     alignment and structure
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Back     alignment and structure
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Back     alignment and structure
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Back     alignment and structure
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Back     alignment and structure
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Back     alignment and structure
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Back     alignment and structure
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E* Back     alignment and structure
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D Back     alignment and structure
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A* Back     alignment and structure
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Back     alignment and structure
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A Back     alignment and structure
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A Back     alignment and structure
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1 Back     alignment and structure
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B Back     alignment and structure
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A* Back     alignment and structure
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens} Back     alignment and structure
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1 Back     alignment and structure
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A Back     alignment and structure
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2 Back     alignment and structure
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2 Back     alignment and structure
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2 Back     alignment and structure
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A Back     alignment and structure
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 517
d1r29a_122 d.42.1.1 (A:) B-cell lymphoma 6 (Bcl6) protein BTB 1e-06
d1buoa_121 d.42.1.1 (A:) Promyelocytic leukaemia zinc finger 7e-06
>d1r29a_ d.42.1.1 (A:) B-cell lymphoma 6 (Bcl6) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]} Length = 122 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: POZ domain
superfamily: POZ domain
family: BTB/POZ domain
domain: B-cell lymphoma 6 (Bcl6) protein BTB domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.5 bits (107), Expect = 1e-06
 Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 3/97 (3%)

Query: 138 DCSTVVRVKTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFM 197
           D   VV  +       +L A S  FY +F++ +K +                   LL+FM
Sbjct: 27  DVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKRNLSVIN--LDPEINPEGFNILLDFM 84

Query: 198 YSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLR 234
           Y++ L+       + V+  A   ++   +  C + ++
Sbjct: 85  YTSRLNLREGNI-MAVMATAMYLQMEHVVDTCRKFIK 120
>d1buoa_ d.42.1.1 (A:) Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]} Length = 121 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query517
d1r29a_122 B-cell lymphoma 6 (Bcl6) protein BTB domain {Human 99.87
d1buoa_121 Promyelocytic leukaemia zinc finger (PLZF) protein 99.85
d1zgka1288 Kelch-like ECH-associated protein 1, KEAP1 {Human 99.31
d1zgka1288 Kelch-like ECH-associated protein 1, KEAP1 {Human 99.12
d1k3ia3 387 Galactose oxidase, central domain {Fungi (Fusarium 98.43
d1k3ia3 387 Galactose oxidase, central domain {Fungi (Fusarium 98.19
d2c9wc196 Elongin C {Human (Homo sapiens) [TaxId: 9606]} 97.38
d1hv2a_99 Elongin C {Baker's yeast (Saccharomyces cerevisiae 97.32
d1nn7a_105 Potassium channel kv4.2 {Rat (Rattus norvegicus) [ 96.36
d3kvta_103 akv3.1 voltage-gated potassium channel {California 96.23
d1t1da_100 Shaker potassium channel {California sea hare (Apl 94.89
d1fs1b155 Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sa 90.1
d1nexa170 Centromere DNA-binding protein complex Cbf3 subuni 87.09
d1nexa272 Centromere DNA-binding protein complex Cbf3 subuni 83.81
d1fs1b261 Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sa 82.61
>d1r29a_ d.42.1.1 (A:) B-cell lymphoma 6 (Bcl6) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: POZ domain
superfamily: POZ domain
family: BTB/POZ domain
domain: B-cell lymphoma 6 (Bcl6) protein BTB domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.1e-22  Score=175.93  Aligned_cols=104  Identities=17%  Similarity=0.310  Sum_probs=94.8

Q ss_pred             HhhhhcCCCCCcccEEEEE--EEEEeehhhhcccCHHHHHhhcCCCCCCcceeEEEccCCCCHHHHHHHHhccccceeec
Q 010134          127 AANGNESSWSMDCSTVVRV--KTLHISSPILAAKSPFFYKLFSNGMKESEQRHVALRINASEEAALMELLNFMYSNTLST  204 (517)
Q Consensus       127 l~~l~~~~~~~~~DV~l~v--~~f~aHr~ILaa~S~yF~amf~~~~~Es~~~~I~l~~~~~~~~~f~~lL~fiYTg~l~i  204 (517)
                      |.+++++  +.+|||+|.+  ++|+|||+|||++|+||++||.+++.|+.+..+.++  ++++++|+.+|+|+|||++.+
T Consensus        16 l~~l~~~--~~~~Dv~l~v~~~~~~~Hk~vLa~~S~~F~~~f~~~~~e~~~~~~~~~--~v~~~~f~~ll~~~Ytg~~~i   91 (122)
T d1r29a_          16 LNRLRSR--DILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKRNLSVINLDP--EINPEGFNILLDFMYTSRLNL   91 (122)
T ss_dssp             HHHHHHT--TCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTTTCSEEECCT--TSCHHHHHHHHHHHHHSCCCC
T ss_pred             HHHHHhc--CCCeEEEEEECCEEEEEehHHhhhCCHHHHHHhccchhhhcceeeeec--ccCHHHHHHHHhhhcCCeecC
Confidence            4444443  4589999999  799999999999999999999999999888777777  899999999999999999999


Q ss_pred             CCcccHHHHHHHHhhcCchhHHHHHHHHhhC
Q 010134          205 TAAPALLDVLMAADKFEVASCMRYCSRLLRN  235 (517)
Q Consensus       205 ~~~~~v~~lL~aAd~~~v~~L~~~C~~~L~~  235 (517)
                      +. +++.+++.+|++|+++.|++.|.+||++
T Consensus        92 ~~-~~v~~ll~~A~~l~i~~L~~~C~~~L~~  121 (122)
T d1r29a_          92 RE-GNIMAVMATAMYLQMEHVVDTCRKFIKA  121 (122)
T ss_dssp             CT-TTHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred             ch-hhHHHHHHHHHHHCcHHHHHHHHHHHHh
Confidence            99 8999999999999999999999999986
>d1buoa_ d.42.1.1 (A:) Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Back     information, alignment and structure
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Back     information, alignment and structure
>d2c9wc1 d.42.1.1 (C:17-112) Elongin C {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1hv2a_ d.42.1.1 (A:) Elongin C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1nn7a_ d.42.1.2 (A:) Potassium channel kv4.2 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d3kvta_ d.42.1.2 (A:) akv3.1 voltage-gated potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]} Back     information, alignment and structure
>d1t1da_ d.42.1.2 (A:) Shaker potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]} Back     information, alignment and structure
>d1fs1b1 a.157.1.1 (B:86-140) Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nexa1 a.157.1.1 (A:116-185) Centromere DNA-binding protein complex Cbf3 subunit D, CBF3D {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1nexa2 d.42.1.1 (A:4-103) Centromere DNA-binding protein complex Cbf3 subunit D, CBF3D {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1fs1b2 d.42.1.1 (B:2-68) Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure