Citrus Sinensis ID: 010144
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 517 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LZ72 | 464 | 3-ketoacyl-CoA synthase 2 | yes | no | 0.856 | 0.954 | 0.650 | 0.0 | |
| Q9SIB2 | 476 | 3-ketoacyl-CoA synthase 1 | no | no | 0.845 | 0.918 | 0.559 | 1e-154 | |
| Q9LQP8 | 478 | 3-ketoacyl-CoA synthase 3 | no | no | 0.852 | 0.922 | 0.559 | 1e-153 | |
| Q9MAM3 | 528 | 3-ketoacyl-CoA synthase 1 | no | no | 0.808 | 0.791 | 0.394 | 1e-93 | |
| Q9ZUZ0 | 466 | 3-ketoacyl-CoA synthase 1 | no | no | 0.837 | 0.929 | 0.387 | 3e-91 | |
| Q9XF43 | 497 | 3-ketoacyl-CoA synthase 6 | no | no | 0.798 | 0.830 | 0.397 | 3e-91 | |
| Q9C6L5 | 492 | 3-ketoacyl-CoA synthase 5 | no | no | 0.812 | 0.853 | 0.397 | 8e-91 | |
| Q4V3C9 | 481 | 3-ketoacyl-CoA synthase 8 | no | no | 0.798 | 0.858 | 0.399 | 8e-90 | |
| Q9LN49 | 516 | 3-ketoacyl-CoA synthase 4 | no | no | 0.779 | 0.781 | 0.387 | 4e-89 | |
| O65677 | 487 | Probable 3-ketoacyl-CoA s | no | no | 0.849 | 0.901 | 0.373 | 1e-88 |
| >sp|Q9LZ72|KCS21_ARATH 3-ketoacyl-CoA synthase 21 OS=Arabidopsis thaliana GN=KCS21 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 634 bits (1636), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 294/452 (65%), Positives = 378/452 (83%), Gaps = 9/452 (1%)
Query: 70 IFHLYKWVLQKRGQ-CCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKN 128
+F+++K+V ++R Q CYML YECYK +E R+LDTE+CA+VV RNK LGLEEYRFLL+
Sbjct: 17 VFYIFKFVFKRRNQRNCYMLHYECYKGMEE-RKLDTETCAKVVQRNKNLGLEEYRFLLRT 75
Query: 129 MVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFART--DISPSEIDVL 186
M SSGIGEETYGPRNV+EGRE+SP+L +A SEMDEI+FDTLDKLF +T ISPS+ID+L
Sbjct: 76 MASSGIGEETYGPRNVLEGREDSPTLLDAHSEMDEIMFDTLDKLFHKTKGSISPSDIDIL 135
Query: 187 VVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAI 246
VVNVSLF+P+PSLTSR+INRY +R DIK++NLSG+GCSASV+++D+VQ++F T +N LA+
Sbjct: 136 VVNVSLFAPSPSLTSRVINRYKMREDIKSYNLSGLGCSASVISIDIVQRMFETRENALAL 195
Query: 247 VVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSN 306
VVSTE+MGP+WYCG+++SMMLSN LFR+GG S+LLTN K++A++KL +VR H GS+
Sbjct: 196 VVSTETMGPHWYCGKDRSMMLSNCLFRAGGSSVLLTNAARFKNQALMKLVTVVRAHVGSD 255
Query: 307 DEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYE 366
DEAY CC+Q+ED+ GHPGF LTK L KAAA A T NLQVL+P++LP++E RY I
Sbjct: 256 DEAYSCCIQMEDRDGHPGFLLTKYLKKAAARALTKNLQVLLPRVLPVKELIRYAIV---- 311
Query: 367 NRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMAL 426
+++ TS+ + A G GLNLK G++HFC+HPGGRA+I+G GK L L E+D+EPARMAL
Sbjct: 312 RALKRRTSAKREPASSGIGLNLKTGLQHFCIHPGGRAIIEGVGKSLGLTEFDIEPARMAL 371
Query: 427 HRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLEDPNVWKD 486
HRFGNTS+GGLWYVLGYMEAK RLKKG++ILM+S+GAGF+ NNCVWEV+KDL+D NVW+D
Sbjct: 372 HRFGNTSSGGLWYVLGYMEAKNRLKKGEKILMMSMGAGFESNNCVWEVLKDLDDKNVWED 431
Query: 487 CIDRYPPKS-LANPFQERYSWLNDEYLSFVRL 517
+DRYP S + NPF E+Y W+ND+ +SFVR+
Sbjct: 432 SVDRYPELSRIPNPFVEKYDWINDDTMSFVRV 463
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: - |
| >sp|Q9SIB2|KCS12_ARATH 3-ketoacyl-CoA synthase 12 OS=Arabidopsis thaliana GN=KCS12 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 544 bits (1402), Expect = e-154, Method: Compositional matrix adjust.
Identities = 250/447 (55%), Positives = 330/447 (73%), Gaps = 10/447 (2%)
Query: 73 LYKWVLQKRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSS 132
++K + K+ + CY+L Y+C+KP D+ R + T+ +++RN+ LGL EY+FLLK +VSS
Sbjct: 19 IWKLIDSKQDKDCYILDYQCHKPTDD-RMVSTQFSGEIIYRNQNLGLTEYKFLLKAIVSS 77
Query: 133 GIGEETYGPRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSL 192
GIGE+TY PR V EGREE PSL + SEM+E D++ KL R ISP +ID+LVVNVS+
Sbjct: 78 GIGEQTYAPRLVFEGREERPSLQDGISEMEEFYVDSIGKLLERNQISPKDIDILVVNVSM 137
Query: 193 FSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTES 252
S PSL SRIIN Y +R+D+K FNL+GMGCSAS+++VD+V+ +F++Y NKLA+V ++ES
Sbjct: 138 LSSTPSLASRIINHYKMRDDVKVFNLTGMGCSASLISVDIVKNIFKSYANKLALVATSES 197
Query: 253 MGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYEC 312
+ PNWY G +SM+L+N LFRSGGC++LLTN R+L+ KA+ KL C+VRTH G+ +E+Y C
Sbjct: 198 LSPNWYSGNNRSMILANCLFRSGGCAILLTNKRSLRKKAMFKLKCMVRTHHGAREESYNC 257
Query: 313 CMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYV-----IQSYYEN 367
C+Q ED+QG GF L K L KAA AF NL+V+ PKILP+ E R++ +
Sbjct: 258 CIQAEDEQGRVGFYLGKNLPKAATRAFVENLKVITPKILPVTELIRFMLKLLIKKIKIRQ 317
Query: 368 RIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALH 427
K +++ P L AG+N K GIEHFC+H GG+AVIDG G L+L+EYD+EPARM LH
Sbjct: 318 NPSKGSTNLPPGTPLKAGINFKTGIEHFCIHTGGKAVIDGIGHSLDLNEYDIEPARMTLH 377
Query: 428 RFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDL----EDPNV 483
RFGNTSA LWYVL YMEAKKRLK+GDR+ MIS GAGFKCN+CVWEV++DL NV
Sbjct: 378 RFGNTSASSLWYVLAYMEAKKRLKRGDRVFMISFGAGFKCNSCVWEVVRDLTGGESKGNV 437
Query: 484 WKDCIDRYPPKSLANPFQERYSWLNDE 510
W CID YPPKS+ NP+ E++ W+ DE
Sbjct: 438 WNHCIDDYPPKSILNPYLEKFGWIQDE 464
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|Q9LQP8|KCS3_ARATH 3-ketoacyl-CoA synthase 3 OS=Arabidopsis thaliana GN=KCS3 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 541 bits (1393), Expect = e-153, Method: Compositional matrix adjust.
Identities = 254/454 (55%), Positives = 338/454 (74%), Gaps = 13/454 (2%)
Query: 68 YIIFHLYKWVLQKRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLK 127
Y+IF ++K + KR Q CY+L Y+C+KP D+ R ++T+ ++ RNK L L EY+FLLK
Sbjct: 14 YLIFKIWKRIDSKRDQNCYILDYQCHKPSDD-RMVNTQFSGDIILRNKHLRLNEYKFLLK 72
Query: 128 NMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLV 187
+VSSGIGE+TY PR EGRE+ P+L + SEM+E DT++K+ R ISPSEID+LV
Sbjct: 73 AIVSSGIGEQTYAPRLFFEGREQRPTLQDGLSEMEEFYIDTIEKVLKRNKISPSEIDILV 132
Query: 188 VNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIV 247
VNVS+ + PSL++RIIN Y +R DIK FNL+ MGCSASV+++D+V+ +F+TYKNKLA+V
Sbjct: 133 VNVSMLNSTPSLSARIINHYKMREDIKVFNLTAMGCSASVISIDIVKNIFKTYKNKLALV 192
Query: 248 VSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSND 307
V++ES+ PNWY G +SM+L+N LFRSGGC++LLTN R+L +A+ KL CLVRTH G+ D
Sbjct: 193 VTSESLSPNWYSGNNRSMILANCLFRSGGCAVLLTNKRSLSRRAMFKLRCLVRTHHGARD 252
Query: 308 EAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYEN 367
+++ C+Q ED+ GH G L K L KAA AF NL+V+ PKILP+ E R+++ +
Sbjct: 253 DSFNACVQKEDELGHIGVHLDKTLPKAATRAFIDNLKVITPKILPVTELLRFMLCLLLK- 311
Query: 368 RIRKSTS-------STKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLE 420
++R S S P+A + AG+N K GI+HFC+H GG+AVID G L+L+EYDLE
Sbjct: 312 KLRSSPSKGSTNVTQAAPKAGVKAGINFKTGIDHFCIHTGGKAVIDAIGYSLDLNEYDLE 371
Query: 421 PARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLE- 479
PARM LHRFGNTSA LWYVLGYMEAKKRLK+GDR+ MIS GAGFKCN+CVWEV++DL
Sbjct: 372 PARMTLHRFGNTSASSLWYVLGYMEAKKRLKRGDRVFMISFGAGFKCNSCVWEVVRDLNV 431
Query: 480 ---DPNVWKDCIDRYPPKSLANPFQERYSWLNDE 510
NVW CI++YPPKS+ NPF E+Y W+++E
Sbjct: 432 GEAVGNVWNHCINQYPPKSILNPFFEKYGWIHEE 465
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|Q9MAM3|KCS1_ARATH 3-ketoacyl-CoA synthase 1 OS=Arabidopsis thaliana GN=KCS1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 343 bits (881), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 171/433 (39%), Positives = 258/433 (59%), Gaps = 15/433 (3%)
Query: 66 LFYIIFHLYKWVLQKRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFL 125
L ++ F L +V R + Y++ + CYKP DE R++ +S + N + +F
Sbjct: 104 LVFLSFVLTLYV-ANRSKPVYLVDFSCYKPEDE-RKISVDSFLTMTEENGSFTDDTVQFQ 161
Query: 126 LKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDV 185
+ +G+G+ETY PR + + +++EA +E + ++F LD LF +T I P+E+ +
Sbjct: 162 QRISNRAGLGDETYLPRGITSTPPK-LNMSEARAEAEAVMFGALDSLFEKTGIKPAEVGI 220
Query: 186 LVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLA 245
L+VN SLF+P PSL++ I+N Y +R DIK++NL GMGCSA ++++DL L + N A
Sbjct: 221 LIVNCSLFNPTPSLSAMIVNHYKMREDIKSYNLGGMGCSAGLISIDLANNLLKANPNSYA 280
Query: 246 IVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGS 305
+VVSTE++ NWY G ++SM+L N +FR GG ++LL+N R + K+ L +VRTH GS
Sbjct: 281 VVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAILLSNRRQDRKKSKYSLVNVVRTHKGS 340
Query: 306 NDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYY 365
+D+ Y C Q ED++G G L ++L A A N+ L P +LPL EQ ++I
Sbjct: 341 DDKNYNCVYQKEDERGTIGVSLARELMSVAGDALKTNITTLGPMVLPLSEQLMFLISLVK 400
Query: 366 ENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMA 425
+ P+ K EHFC+H GGRAV+D K L+L ++ +EP+RM
Sbjct: 401 RKMFKLKVKPYIPD--------FKLAFEHFCIHAGGRAVLDEVQKNLDLKDWHMEPSRMT 452
Query: 426 LHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLEDP---- 481
LHRFGNTS+ LWY + Y EAK R+K GDR+ I+ G+GFKCN+ VW+ ++ +
Sbjct: 453 LHRFGNTSSSSLWYEMAYTEAKGRVKAGDRLWQIAFGSGFKCNSAVWKALRPVSTEEMTG 512
Query: 482 NVWKDCIDRYPPK 494
N W ID+YP K
Sbjct: 513 NAWAGSIDQYPVK 525
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Contributes to cuticular wax and suberin biosynthesis. Involved in both decarbonylation and acyl-reduction wax synthesis pathways. Elongase condensing enzyme mostly active with saturated fatty acids, especially with 16:0, 16:1, 18:0, and 20:0. Mediates the synthesis of VLCFAs from 20 to 26 carbons in length (e.g. C20:1, C20, C22, C24 and C26). Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 1 EC: 9 |
| >sp|Q9ZUZ0|KCS13_ARATH 3-ketoacyl-CoA synthase 13 OS=Arabidopsis thaliana GN=HIC PE=2 SV=1 | Back alignment and function description |
|---|
Score = 336 bits (861), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 175/452 (38%), Positives = 266/452 (58%), Gaps = 19/452 (4%)
Query: 46 LCQLSYFFFSFIMALLYLLPLFYIIFHLYKWVLQKRGQCCYMLAYECYKPCDETRRLDTE 105
L + FFS + LL L I F+ Y R + Y++ + C++P D + + +E
Sbjct: 25 LLHFHHDFFSPFPVKIGLL-LISIFFYAYS---TTRSKPVYLVDFSCHQPTDSCK-ISSE 79
Query: 106 SCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDEII 165
+ + + E +F+ + + SG+G++TY PR ++ +PS+ EA E + +I
Sbjct: 80 TFFNMAKGAQLYTDETIQFMTRILNRSGLGDDTYSPRCMLTS-PPTPSMYEARHESELVI 138
Query: 166 FDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSA 225
F L+ LF +T I P E+ + +VN SLF+P PSL+S I+NRY L+ D+K +NLSGMGCSA
Sbjct: 139 FGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVKTYNLSGMGCSA 198
Query: 226 SVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNR 285
++VDL L + N A++VSTE+M + Y G ++SM++ N LFR GG +++L+N
Sbjct: 199 GAISVDLATNLLKANPNTYAVIVSTENMTLSMYRGNDRSMLVPNCLFRVGGAAVMLSNRS 258
Query: 286 ALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQV 345
+ ++ +L +VRTH GS+D+ Y C Q ED +G G L+K+LT A + NL
Sbjct: 259 QDRVRSKYELTHIVRTHKGSSDKHYTCAEQKEDSKGIVGVALSKELTVVAGDSLKTNLTA 318
Query: 346 LVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVI 405
L P +LPL E+ R+++ R S P+ K +HFC+H GGRA++
Sbjct: 319 LGPLVLPLSEKLRFILFLVKSKLFRLKVSPYVPD--------FKLCFKHFCIHAGGRALL 370
Query: 406 DGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGF 465
D KGL L E+DLEP+RM LHRFGNTS+ LWY L Y+EAK R+K+GDR+ ++ G+GF
Sbjct: 371 DAVEKGLGLSEFDLEPSRMTLHRFGNTSSSSLWYELAYVEAKCRVKRGDRVWQLAFGSGF 430
Query: 466 KCNNCVWEVMKDLED-----PNVWKDCIDRYP 492
KCN+ VW ++ + N W D + +YP
Sbjct: 431 KCNSIVWRALRTIPANESLVGNPWGDSVHKYP 462
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Contributes to cuticular wax and suberin biosynthesis (By similarity). Regulates negatively the stomatal development in elevated CO(2) conditions. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|Q9XF43|KCS6_ARATH 3-ketoacyl-CoA synthase 6 OS=Arabidopsis thaliana GN=CUT1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 336 bits (861), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 171/430 (39%), Positives = 261/430 (60%), Gaps = 17/430 (3%)
Query: 67 FYIIFHLYKWVLQKRGQCCYMLAYECYKPCDETRR--LDTESCARVVWRNKKLGLEEYRF 124
F++IF + + K + Y++ Y CYKP R +R++ ++K +E F
Sbjct: 72 FFVIFISTVYFMSK-PRTIYLVDYSCYKPPVTCRVPFATFMEHSRLILKDKPKSVE---F 127
Query: 125 LLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEID 184
++ + SG+GEET P + +P++ A SE +IF+ +D LF +T + P ++D
Sbjct: 128 QMRILERSGLGEETCLP-PAIHYIPPTPTMDAARSEAQMVIFEAMDDLFKKTGLKPKDVD 186
Query: 185 VLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKL 244
+L+VN SLFSP PSL++ +IN+Y LR++IK+FNLSGMGCSA +++VDL + L + + N
Sbjct: 187 ILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISVDLARDLLQVHPNSN 246
Query: 245 AIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFG 304
AI+VSTE + PN+Y G E++M+L N LFR G ++ ++N R+ + +A KL+ LVRTH G
Sbjct: 247 AIIVSTEIITPNYYQGNERAMLLPNCLFRMGAAAIHMSNRRSDRWRAKYKLSHLVRTHRG 306
Query: 305 SNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSY 364
++D+++ C + ED++GH G L+K L A A N+ + P +LP EQ ++
Sbjct: 307 ADDKSFYCVYEQEDKEGHVGINLSKDLMAIAGEALKANITTIGPLVLPASEQLLFLTSLI 366
Query: 365 YENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARM 424
P+ K EHFC+H GGRAVID K L+L +E +RM
Sbjct: 367 GRKIFNPKWKPYIPD--------FKLAFEHFCIHAGGRAVIDELQKNLQLSGEHVEASRM 418
Query: 425 ALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLEDP--N 482
LHRFGNTS+ LWY L Y+E+K R+++GDR+ I+ G+GFKCN+ VW+ + ++ P
Sbjct: 419 TLHRFGNTSSSSLWYELSYIESKGRMRRGDRVWQIAFGSGFKCNSAVWKCNRTIKTPKDG 478
Query: 483 VWKDCIDRYP 492
W DCIDRYP
Sbjct: 479 PWSDCIDRYP 488
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Contributes to cuticular wax and suberin biosynthesis. Involved in both decarbonylation and acyl-reduction wax synthesis pathways. Required for elongation of C24 fatty acids, an essential step of the cuticular wax production. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|Q9C6L5|KCS5_ARATH 3-ketoacyl-CoA synthase 5 OS=Arabidopsis thaliana GN=KCS5 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 334 bits (857), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 174/438 (39%), Positives = 270/438 (61%), Gaps = 18/438 (4%)
Query: 60 LLYLLPLFYIIFHLYKWVLQKRGQCCYMLAYECYKPCDETRRLDTES---CARVVWRNKK 116
LL++L ++I + + + Y++ Y CYKP T R+ S +R++ ++
Sbjct: 59 LLHILCSSFLIIFVSTVYFMSKPRTVYLVDYSCYKP-PVTCRVPFSSFMEHSRLILKDNP 117
Query: 117 LGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFART 176
+E F ++ + SG+GEET P + +P++ A +E +IF ++ LF T
Sbjct: 118 KSVE---FQMRILERSGLGEETCLPP-AIHYIPPTPTMESARNEAQMVIFTAMEDLFKNT 173
Query: 177 DISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQL 236
+ P +ID+L+VN SLFSP PSL++ IIN+Y LR++IK++NLSGMGCSAS+++VD+ + L
Sbjct: 174 GLKPKDIDILIVNCSLFSPTPSLSAMIINKYKLRSNIKSYNLSGMGCSASLISVDVARDL 233
Query: 237 FRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLN 296
+ + N AI++STE + PN+Y G E++M+L N LFR GG ++LL+N R+ + +A KL
Sbjct: 234 LQVHPNSNAIIISTEIITPNYYKGNERAMLLPNCLFRMGGAAILLSNRRSDRWRAKYKLC 293
Query: 297 CLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQ 356
LVRTH G++D++Y C M+ ED+ G+ G L+K L A A N+ + P +LP EQ
Sbjct: 294 HLVRTHRGADDKSYNCVMEQEDKNGNVGINLSKDLMTIAGEALKANITTIGPLVLPASEQ 353
Query: 357 FRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDE 416
++ + I + + K + + + K EHFC+H GGRAVID K L+L
Sbjct: 354 LLFL-----SSLIGRKIFNPKWKPYIP---DFKQAFEHFCIHAGGRAVIDELQKNLQLSG 405
Query: 417 YDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMK 476
+E +RM LHRFGNTS+ LWY L Y+EA+ R+K+ DR+ I+ G+GFKCN+ VW+ +
Sbjct: 406 EHVEASRMTLHRFGNTSSSSLWYELSYIEAQGRMKRNDRVWQIAFGSGFKCNSAVWKCNR 465
Query: 477 DLEDPN--VWKDCIDRYP 492
++ P W DCI+RYP
Sbjct: 466 TIKTPTDGAWSDCIERYP 483
|
Mediates mostly the synthesis of VLCFAs from 26 to 30 carbons in length (e.g. C20:1, C26, C28, C30). Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|Q4V3C9|KCS8_ARATH 3-ketoacyl-CoA synthase 8 OS=Arabidopsis thaliana GN=KCS8 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 331 bits (849), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 181/453 (39%), Positives = 264/453 (58%), Gaps = 40/453 (8%)
Query: 57 IMALLYLLPLFYIIFHLYKWVLQKRGQCCYMLAYECYKPCDETR--------RLDTESCA 108
I LL+L+ +I++ L R + Y++ + CY P + A
Sbjct: 47 ISLLLFLVVFVWILYML------TRPKPVYLVDFSCYLPPSHLKVSIQTLMGHARRAREA 100
Query: 109 RVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESP---SLAEAFSEMDEII 165
+ W+NK+ F K + SG+G+ETY P EG + P + + E +E+I
Sbjct: 101 GMCWKNKESD-HLVDFQEKILERSGLGQETYIP----EGLQCFPLQQGMGASRKETEEVI 155
Query: 166 FDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSA 225
F LD LF T + P +I +LVVN S F+P PSL S I+N+Y LR++IK+ NL GMGCSA
Sbjct: 156 FGALDNLFRNTGVKPDDIGILVVNSSTFNPTPSLASMIVNKYKLRDNIKSLNLGGMGCSA 215
Query: 226 SVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNR 285
V+AVD+ + L + ++N AIVVSTE++ N Y G+ KSM+++N LFR GG ++LL+N
Sbjct: 216 GVIAVDVAKGLLQVHRNTYAIVVSTENITQNLYLGKNKSMLVTNCLFRVGGAAVLLSNRS 275
Query: 286 ALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQV 345
+++A +L VR H GS+D ++EC Q ED+ G G LTK L AA +N+
Sbjct: 276 RDRNRAKYELVHTVRIHTGSDDRSFECATQEEDEDGIIGVTLTKNLPMVAARTLKINIAT 335
Query: 346 LVPKILPLREQFRYVI----QSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGG 401
L P +LPL+E+ + I + Y++ +R T + K EHFC+H GG
Sbjct: 336 LGPLVLPLKEKLAFFITFVKKKYFKPELRNYTP------------DFKLAFEHFCIHAGG 383
Query: 402 RAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISL 461
RA+ID K L+L +E +RM LHRFGNTS+ +WY L Y EAK R+K+GDRI I+L
Sbjct: 384 RALIDELEKNLKLSPLHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMKEGDRIWQIAL 443
Query: 462 GAGFKCNNCVWEVMKDLEDP--NVWKDCIDRYP 492
G+GFKCN+ VW ++D++ + W+DC+DRYP
Sbjct: 444 GSGFKCNSSVWVALRDVKPSANSPWEDCMDRYP 476
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|Q9LN49|KCS4_ARATH 3-ketoacyl-CoA synthase 4 OS=Arabidopsis thaliana GN=KCS4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 329 bits (843), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 169/436 (38%), Positives = 259/436 (59%), Gaps = 33/436 (7%)
Query: 69 IIFHLYKWVLQKRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGL---EEYRFL 125
++F L +V+ R + Y++ + CY P D + AR + ++ G F
Sbjct: 97 LVFGLTVYVMT-RPRPVYLVDFSCYLPPDHLK----APYARFMEHSRLTGDFDDSALEFQ 151
Query: 126 LKNMVSSGIGEETYGPRNVVEGREESP---SLAEAFSEMDEIIFDTLDKLFARTDISPSE 182
K + SG+GE+TY P E P S+A A E ++++F LD LFA T++ P +
Sbjct: 152 RKILERSGLGEDTYVP----EAMHYVPPRISMAAAREEAEQVMFGALDNLFANTNVKPKD 207
Query: 183 IDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKN 242
I +LVVN SLF+P PSL++ I+N+Y LR +I+++NL GMGCSA V+AVDL + + ++N
Sbjct: 208 IGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSYNLGGMGCSAGVIAVDLAKDMLLVHRN 267
Query: 243 KLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTH 302
A+VVSTE++ NWY G +KSM++ N LFR GG ++LL+N K ++ +L +VRTH
Sbjct: 268 TYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYRLVHVVRTH 327
Query: 303 FGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRY--- 359
G++D+A+ C Q +D G G L+K L A N+ L P +LP+ EQ +
Sbjct: 328 RGADDKAFRCVYQEQDDTGRTGVSLSKDLMAIAGETLKTNITTLGPLVLPISEQILFFMT 387
Query: 360 -VIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYD 418
V++ + +++ + K EHFC+H GGRAVID K L+L
Sbjct: 388 LVVKKLFNGKVKPYIP------------DFKLAFEHFCIHAGGRAVIDELEKNLQLSPVH 435
Query: 419 LEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDL 478
+E +RM LHRFGNTS+ +WY L Y+EAK R+++G+R+ I+ G+GFKCN+ +WE ++ +
Sbjct: 436 VEASRMTLHRFGNTSSSSIWYELAYIEAKGRMRRGNRVWQIAFGSGFKCNSAIWEALRHV 495
Query: 479 EDPN--VWKDCIDRYP 492
+ N W+DCID+YP
Sbjct: 496 KPSNNSPWEDCIDKYP 511
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|O65677|KCS2_ARATH Probable 3-ketoacyl-CoA synthase 2 OS=Arabidopsis thaliana GN=KCS2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 327 bits (838), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 176/471 (37%), Positives = 267/471 (56%), Gaps = 32/471 (6%)
Query: 34 LEIFFFSFPPFSLCQLSYFF----FSFIMALLYLLPLFYIIFHLYKWVLQKRGQCCYMLA 89
+ + F + SL L ++ F F++ L + + + + R + Y+L
Sbjct: 36 MAVLFMNVSLLSLNHLQLYYNSTGFIFVITLAIVGSIVFFM---------SRPRSIYLLD 86
Query: 90 YECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGRE 149
Y CY P ++++ + + F K ++ SG+GEETY P + +
Sbjct: 87 YSCYLP-PSSQKVSYQKFMNNSSLIQDFSETSLEFQRKILIRSGLGEETYLP-DSIHSIP 144
Query: 150 ESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNL 209
P++A A E +++IF LD LF T I+P EI VLVVN SLF+P PSL++ I+N+Y L
Sbjct: 145 PRPTMAAAREEAEQVIFGALDNLFENTKINPREIGVLVVNCSLFNPTPSLSAMIVNKYKL 204
Query: 210 RNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGREKSMMLSN 269
R +IK+FNL GMGCSA V+AVDL + + ++N A+VVSTE++ NWY G +K+M++ N
Sbjct: 205 RGNIKSFNLGGMGCSAGVIAVDLASDMLQIHRNTFALVVSTENITQNWYFGNKKAMLIPN 264
Query: 270 ILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTK 329
LFR GG ++LL+N + ++ KL VRTH GS++ A+ C Q +D+ G L+K
Sbjct: 265 CLFRVGGSAVLLSNKPLDRKRSKYKLVHTVRTHKGSDENAFNCVYQEQDECLKTGVSLSK 324
Query: 330 QLTKAAALAFTMNLQVLVPKILPLREQF----RYVIQSYYENRIRKSTSSTKPEAVLGAG 385
L A A N+ L P +LP+ EQ +V + + ++ +K
Sbjct: 325 DLMAIAGEALKTNITSLGPLVLPISEQILFFATFVAKRLFNDKKKKPYIP---------- 374
Query: 386 LNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYME 445
+ K ++HFC+H GGRAVID K L+L +E +RM LHRFGNTS+ +WY L Y E
Sbjct: 375 -DFKLALDHFCIHAGGRAVIDELEKSLKLSPKHVEASRMTLHRFGNTSSSSIWYELAYTE 433
Query: 446 AKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLEDP--NVWKDCIDRYPPK 494
AK R++KG+R+ I+ G+GFKCN+ VW ++++E N W+ CI RYP K
Sbjct: 434 AKGRMRKGNRVWQIAFGSGFKCNSAVWVALRNVEPSVNNPWEHCIHRYPVK 484
|
Active on saturated acyl-CoAs up to C22. Mediates the synthesis of VLCFAs from 20 to 26 carbons in length (e.g. C20:1, C20, C24, C26). Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 1 EC: 9 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 517 | ||||||
| 449451872 | 481 | PREDICTED: 3-ketoacyl-CoA synthase 21-li | 0.889 | 0.956 | 0.676 | 0.0 | |
| 224146504 | 467 | beta-ketoacyl-coa synthase family protei | 0.858 | 0.950 | 0.703 | 0.0 | |
| 224135387 | 436 | beta-ketoacyl-coa synthase family protei | 0.822 | 0.974 | 0.716 | 0.0 | |
| 312837055 | 460 | hypothetical protein [Vitis hybrid culti | 0.858 | 0.965 | 0.686 | 0.0 | |
| 224109616 | 452 | beta-ketoacyl-coa synthase family protei | 0.870 | 0.995 | 0.671 | 0.0 | |
| 359486436 | 537 | PREDICTED: 3-ketoacyl-CoA synthase 21, p | 0.858 | 0.826 | 0.684 | 0.0 | |
| 147776590 | 460 | hypothetical protein VITISV_017588 [Viti | 0.858 | 0.965 | 0.684 | 0.0 | |
| 356536510 | 483 | PREDICTED: 3-ketoacyl-CoA synthase 21-li | 0.868 | 0.929 | 0.683 | 0.0 | |
| 297810541 | 464 | beta-ketoacyl-CoA synthase family protei | 0.856 | 0.954 | 0.652 | 1e-179 | |
| 15238194 | 464 | 3-ketoacyl-CoA synthase 21 [Arabidopsis | 0.856 | 0.954 | 0.650 | 1e-179 |
| >gi|449451872|ref|XP_004143684.1| PREDICTED: 3-ketoacyl-CoA synthase 21-like [Cucumis sativus] gi|449523105|ref|XP_004168565.1| PREDICTED: 3-ketoacyl-CoA synthase 21-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 668 bits (1724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/467 (67%), Positives = 377/467 (80%), Gaps = 7/467 (1%)
Query: 57 IMALLYLLPLFYIIFHLYKWVLQKRGQC-CYMLAYECYKPCDETRRLDTESCARVVWRNK 115
+M L L+ + + IF L+K LQ + Q CYMLAY+CYKP D TR L+T+SC ++V RNK
Sbjct: 5 LMMALCLITILFTIFTLFKLFLQWKNQSSCYMLAYQCYKPTDPTRTLNTDSCVKIVLRNK 64
Query: 116 KLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFAR 175
LGLEEYRFLLK +VSSGIGE TY P+NV+EG EE+P+L+EA +EMD+IIFDTLDKLFA+
Sbjct: 65 NLGLEEYRFLLKTIVSSGIGEHTYAPKNVLEGHEENPTLSEAVAEMDDIIFDTLDKLFAK 124
Query: 176 TDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQ 235
T +SPS+I +LVV+VSLFSP+P LTSRI+NRY +R DIKAFNLSGMGCSAS+VA+DLV
Sbjct: 125 TLVSPSDIKILVVSVSLFSPSPCLTSRIVNRYKMREDIKAFNLSGMGCSASIVAIDLVNN 184
Query: 236 LFRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKL 295
LF+ Y N AIVV+TESMGPNWY G+EK M+LSN LFRSGGCSML TN R LKH+A+LKL
Sbjct: 185 LFKCYDNSYAIVVATESMGPNWYVGKEKQMVLSNCLFRSGGCSMLFTNKRELKHQAMLKL 244
Query: 296 NCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLRE 355
CLVR+H G+NDEAY+CC+QVED +G+ GFRLTK L KAA+ F MNL+VLVPKILPLRE
Sbjct: 245 KCLVRSHLGANDEAYQCCIQVEDDRGYRGFRLTKNLPKAASKIFAMNLRVLVPKILPLRE 304
Query: 356 QFRYVIQSYY--ENRIRKSTSSTKPEAVLG----AGLNLKAGIEHFCLHPGGRAVIDGTG 409
RYVI + + +N+ K + L GLNLK G++HFC+HPGGRAVID G
Sbjct: 305 LLRYVIANSFVQKNKPPKGAAMGSGGGGLRQGPITGLNLKTGVDHFCIHPGGRAVIDSVG 364
Query: 410 KGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNN 469
K L L+ YDLEPARMALHRFGNTS+ G WYV GYMEAKKRLKKG+R+LMIS GAGFKCNN
Sbjct: 365 KSLGLNAYDLEPARMALHRFGNTSSAGFWYVFGYMEAKKRLKKGERLLMISFGAGFKCNN 424
Query: 470 CVWEVMKDLEDPNVWKDCIDRYPPKSLANPFQERYSWLNDEYLSFVR 516
C WEVM+DLED NVWKDCID YPP+SL NPF E+YSW+ DE L+F+R
Sbjct: 425 CAWEVMRDLEDENVWKDCIDSYPPQSLTNPFMEKYSWIYDESLNFIR 471
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224146504|ref|XP_002326030.1| beta-ketoacyl-coa synthase family protein [Populus trichocarpa] gi|222862905|gb|EEF00412.1| beta-ketoacyl-coa synthase family protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/449 (70%), Positives = 372/449 (82%), Gaps = 5/449 (1%)
Query: 68 YIIFHLYKWVLQKRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLK 127
Y I L K QKR Q CYML+Y+C K E R+LDT SCA++V RN LG+EEYRFLLK
Sbjct: 14 YAISKLCKVAFQKRDQRCYMLSYQCQKAA-EDRKLDTGSCAKIVLRNNSLGIEEYRFLLK 72
Query: 128 NMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLV 187
VSSGIGEETY PRNV+EGREES +L +A SEMD+IIFDTLDKLFA+T +SPSEID++V
Sbjct: 73 TKVSSGIGEETYCPRNVIEGREESATLMDALSEMDDIIFDTLDKLFAKTGVSPSEIDIIV 132
Query: 188 VNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIV 247
+VSLFSPAPSLT+R+INRY +R DIKAFNLSGMGCSASVVAVDLV+QLF+TY+N AIV
Sbjct: 133 ASVSLFSPAPSLTARVINRYKMRRDIKAFNLSGMGCSASVVAVDLVKQLFKTYRNSFAIV 192
Query: 248 VSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSND 307
VSTES+GPNWY G+EKSMMLSNILFR+GGCSMLLTNNRAL KA+L+L C VRTH GS+
Sbjct: 193 VSTESIGPNWYSGKEKSMMLSNILFRTGGCSMLLTNNRALNEKALLELTCAVRTHIGSDH 252
Query: 308 EAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYEN 367
EAY C+QVED G+ GFRLT+ L +A A A TM L+VL+PK+LPL E RY I SYY N
Sbjct: 253 EAYSSCIQVEDDLGNKGFRLTRDLPRAGAKALTMILRVLLPKVLPLSEMLRYKI-SYYRN 311
Query: 368 RIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALH 427
+I K ++ P+ + G GLNLK+GI+HFC+HPGGRA+ID GK L L+++DLEPARMAL+
Sbjct: 312 KITKRST---PKGIAGPGLNLKSGIDHFCVHPGGRAIIDEVGKSLALNDHDLEPARMALY 368
Query: 428 RFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLEDPNVWKDC 487
RFGNTS+GGLWYVLGYMEAKK LKKG+ ILMISLGAGFKC NCVW+VMKD+ED NVWKDC
Sbjct: 369 RFGNTSSGGLWYVLGYMEAKKMLKKGETILMISLGAGFKCYNCVWKVMKDMEDTNVWKDC 428
Query: 488 IDRYPPKSLANPFQERYSWLNDEYLSFVR 516
ID YPP +LANPF E++ W+NDE + F R
Sbjct: 429 IDHYPPNTLANPFSEKFDWINDESMRFAR 457
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224135387|ref|XP_002327205.1| beta-ketoacyl-coa synthase family protein [Populus trichocarpa] gi|222835575|gb|EEE74010.1| beta-ketoacyl-coa synthase family protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/431 (71%), Positives = 368/431 (85%), Gaps = 6/431 (1%)
Query: 87 MLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVE 146
ML+Y+C+K E ++LDT SCA++V RNK LG+EEYRFLL+ MVSSGIGE+TY P+N++E
Sbjct: 1 MLSYQCHKAT-EDQKLDTGSCAKIVTRNKNLGIEEYRFLLRTMVSSGIGEQTYCPKNIIE 59
Query: 147 GREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINR 206
GREES + +A SEMD IIF TLDKLFA+T +SPSEID++V +VSLFSP PSLT+R+IN
Sbjct: 60 GREESATHMDAVSEMDGIIFHTLDKLFAKTGVSPSEIDIIVSSVSLFSPVPSLTARVINH 119
Query: 207 YNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGREKSMM 266
Y +R DIKAFNLSGMGCSASVVAVDLV+QLF+TYKN LAIVVSTESMGPNWY G++KSMM
Sbjct: 120 YKMREDIKAFNLSGMGCSASVVAVDLVKQLFKTYKNSLAIVVSTESMGPNWYSGKDKSMM 179
Query: 267 LSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFR 326
LSNILFR+GGCSMLLTNNRALKHKA+L+L C VRTH GSNDEAY C+QVED GH GFR
Sbjct: 180 LSNILFRTGGCSMLLTNNRALKHKALLELTCSVRTHIGSNDEAYSSCIQVEDDLGHKGFR 239
Query: 327 LTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGL 386
LT+ L KA A A TMNL+VL+PK+LPL E RY I SYY N+I K +S G GL
Sbjct: 240 LTRDLPKAGAKALTMNLRVLLPKVLPLSELLRYKI-SYYRNKIMKRPTS----KAAGPGL 294
Query: 387 NLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEA 446
+L++GI+HFC+HPGGRA+ID GK L L++YDLEPARMAL+RFGNTS+GGLWYVLGYMEA
Sbjct: 295 DLRSGIDHFCVHPGGRAIIDEVGKSLALNDYDLEPARMALYRFGNTSSGGLWYVLGYMEA 354
Query: 447 KKRLKKGDRILMISLGAGFKCNNCVWEVMKDLEDPNVWKDCIDRYPPKSLANPFQERYSW 506
KKRLKKGD+ILMISLGAGFKCNNCVW+VMKDLED NVW+DCID+YPPK++ NPF E++ W
Sbjct: 355 KKRLKKGDKILMISLGAGFKCNNCVWKVMKDLEDTNVWQDCIDQYPPKTIDNPFSEKFDW 414
Query: 507 LNDEYLSFVRL 517
+NDE ++F R+
Sbjct: 415 INDESMNFARI 425
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|312837055|dbj|BAJ34933.1| hypothetical protein [Vitis hybrid cultivar] | Back alignment and taxonomy information |
|---|
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/450 (68%), Positives = 370/450 (82%), Gaps = 6/450 (1%)
Query: 68 YIIFHLYKWVLQKRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLK 127
Y I K +L R Q CYM+ YEC+K ++T+ L+T++CA +V RNK LGLEEY+FLL+
Sbjct: 14 YAIILFCKKLLAWRDQRCYMVHYECFKASEDTK-LNTDTCAGIVLRNKNLGLEEYKFLLQ 72
Query: 128 NMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLV 187
+VSSGIGEETY P+ V+ G+E+SPSL ++ SE++EI++DTLDKLFA+T +SPSEIDVLV
Sbjct: 73 TIVSSGIGEETYSPKIVLAGQEDSPSLKDSLSEIEEIMYDTLDKLFAKTGVSPSEIDVLV 132
Query: 188 VNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIV 247
VNVSL SP+PSLT+RIINRY ++ DIK++NLSGMGCSAS++A+D+ + +F+ +K+ A+V
Sbjct: 133 VNVSLLSPSPSLTARIINRYKMKEDIKSYNLSGMGCSASLLAIDIARNIFKFHKDAFAVV 192
Query: 248 VSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSND 307
VSTESMGPNWYCGREKSMMLSN LFR GGCSMLLTN RA+KH+A+ KLN LVRTH GSND
Sbjct: 193 VSTESMGPNWYCGREKSMMLSNCLFRVGGCSMLLTNKRAMKHRALFKLNTLVRTHLGSND 252
Query: 308 EAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYEN 367
EAY CC+Q+ED G+ GF LTK+LTKAAAL+FT NL+ LVPK+LPL + RYVI S
Sbjct: 253 EAYNCCIQIEDSLGYRGFCLTKKLTKAAALSFTENLKALVPKVLPLWQLLRYVISS---- 308
Query: 368 RIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALH 427
R K S E V AGL+ K G+EHFC+HPGGRAVIDG GK L L EYDLEPARMALH
Sbjct: 309 RFGKKNDSPVLELV-AAGLDFKTGVEHFCIHPGGRAVIDGVGKSLGLTEYDLEPARMALH 367
Query: 428 RFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLEDPNVWKDC 487
RFGNTSAGGLWYVLGYMEAKKRLKKGDRILMIS GAGFKCNNCVW+VMKDLED NVW+DC
Sbjct: 368 RFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISFGAGFKCNNCVWQVMKDLEDANVWEDC 427
Query: 488 IDRYPPKSLANPFQERYSWLNDEYLSFVRL 517
I YPPKS+ NPF E+Y W+ND SFV+L
Sbjct: 428 IASYPPKSIVNPFIEKYGWINDPSASFVKL 457
|
Source: Vitis hybrid cultivar Species: Vitis hybrid cultivar Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224109616|ref|XP_002315256.1| beta-ketoacyl-coa synthase family protein [Populus trichocarpa] gi|222864296|gb|EEF01427.1| beta-ketoacyl-coa synthase family protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/456 (67%), Positives = 370/456 (81%), Gaps = 6/456 (1%)
Query: 61 LYLLPLFYIIFHLYKWVLQKRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLE 120
+ L LF+IIF L K V KR CCYMLAYECYK E R+LDTE+ A++V+RNK LG+E
Sbjct: 1 MILCTLFFIIFCLCKLVFLKRESCCYMLAYECYKA-PEDRKLDTETSAKIVFRNKNLGIE 59
Query: 121 EYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTDISP 180
EY+FLL +VSSGIGE TY PRN++ G+E+S +L + +EMD++IFDTLDKLFA+T ISP
Sbjct: 60 EYKFLLHTIVSSGIGEGTYVPRNIISGQEDSSTLKVSITEMDDLIFDTLDKLFAKTGISP 119
Query: 181 SEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTY 240
SEID+LVVNVSLFSPAPSL +R++NRY +R+++K FNLSGMGCSASVV++DLVQ LF+++
Sbjct: 120 SEIDILVVNVSLFSPAPSLAARVVNRYKMRSNVKTFNLSGMGCSASVVSIDLVQHLFKSH 179
Query: 241 KNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVR 300
KN A+VVSTES+GPNWY G+EKSMMLSN LFRSGGCSML TNN ALK +AI +L LVR
Sbjct: 180 KNAFAVVVSTESIGPNWYQGKEKSMMLSNCLFRSGGCSMLFTNNSALKRQAIFRLKHLVR 239
Query: 301 THFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYV 360
TH GS DE+Y CC Q D G+ GF LTK L K+AA A +NL+VL PK+LP+ E RYV
Sbjct: 240 THLGSKDESYGCCTQTVDDLGYKGFLLTKSLKKSAAQALALNLRVLAPKMLPVSELIRYV 299
Query: 361 IQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLE 420
Y R +K+ S++ E +GAGLNLK G++H C+HPGGRA+ID GK L L YDLE
Sbjct: 300 ---YVSLREKKTKSTSIQE--MGAGLNLKTGVDHLCIHPGGRAIIDEVGKSLGLSNYDLE 354
Query: 421 PARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLED 480
P RMALHRFGNTSAGGLWYVL YMEAK+RLKKG++ILMISLGAGFKCNNCVWEVM+DLED
Sbjct: 355 PTRMALHRFGNTSAGGLWYVLAYMEAKQRLKKGNKILMISLGAGFKCNNCVWEVMRDLED 414
Query: 481 PNVWKDCIDRYPPKSLANPFQERYSWLNDEYLSFVR 516
NVWKD ID+YPP++ NPF E+YSW+N+EYLSFVR
Sbjct: 415 VNVWKDSIDQYPPETTVNPFIEKYSWINEEYLSFVR 450
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359486436|ref|XP_002282219.2| PREDICTED: 3-ketoacyl-CoA synthase 21, partial [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/450 (68%), Positives = 370/450 (82%), Gaps = 6/450 (1%)
Query: 68 YIIFHLYKWVLQKRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLK 127
Y I K +L R Q CYM+ YEC+K ++T+ L+T++CA +V RNK LGLEEY+FLL+
Sbjct: 91 YAIILFCKKLLAWRDQRCYMVHYECFKASEDTK-LNTDTCAGIVLRNKNLGLEEYKFLLQ 149
Query: 128 NMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLV 187
+VSSGIGEETY P+ V+ G+E+SPSL ++ SE++EI++DTLDKLFA+T +SPSEIDVLV
Sbjct: 150 TIVSSGIGEETYSPKIVLAGQEDSPSLKDSLSEIEEIMYDTLDKLFAKTGVSPSEIDVLV 209
Query: 188 VNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIV 247
VNVSL SP+PSLT+RIINRY ++ DIK++NLSGMGCSAS++A+D+ + +F+ +K+ A+V
Sbjct: 210 VNVSLLSPSPSLTARIINRYKMKEDIKSYNLSGMGCSASLLAIDIARNIFKFHKDAFAVV 269
Query: 248 VSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSND 307
VSTESMGPNWYCGREKSMMLSN LFR GGCSMLLTN RA+KH+A+ KLN LVRTH GSND
Sbjct: 270 VSTESMGPNWYCGREKSMMLSNCLFRVGGCSMLLTNKRAMKHRALFKLNTLVRTHLGSND 329
Query: 308 EAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYEN 367
EAY CC+Q+ED G+ GF LTK+LTKAAAL+FT NL+ LVPK+LPL + RYVI S
Sbjct: 330 EAYNCCIQIEDSLGYRGFCLTKKLTKAAALSFTENLKALVPKVLPLWQLLRYVISS---- 385
Query: 368 RIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALH 427
R K S E V AGL+ K G+EHFC+HPGGRAVIDG GK L L EYDLEPARMALH
Sbjct: 386 RFGKKNDSPVLELV-AAGLDFKTGVEHFCIHPGGRAVIDGVGKSLGLTEYDLEPARMALH 444
Query: 428 RFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLEDPNVWKDC 487
RFGNTSAGGLWYVLGYMEAKKRLKKGDRILMIS GAGFKCNNCVW+VMKDL+D NVW+DC
Sbjct: 445 RFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISFGAGFKCNNCVWQVMKDLKDANVWEDC 504
Query: 488 IDRYPPKSLANPFQERYSWLNDEYLSFVRL 517
I YPPKS+ NPF E+Y W+ND SFV+L
Sbjct: 505 IASYPPKSIVNPFIEKYGWINDPSASFVKL 534
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147776590|emb|CAN60802.1| hypothetical protein VITISV_017588 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/450 (68%), Positives = 370/450 (82%), Gaps = 6/450 (1%)
Query: 68 YIIFHLYKWVLQKRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLK 127
Y I K +L R Q CYM+ YEC+K ++T+ L+T++CA +V RNK LGLEEY+FLL+
Sbjct: 14 YAIILFCKKLLAWRDQRCYMVHYECFKASEDTK-LNTDTCAGIVLRNKNLGLEEYKFLLQ 72
Query: 128 NMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLV 187
+VSSGIGEETY P+ V+ G+E+SPSL ++ SE++EI++DTLDKLFA+T +SPSEIDVLV
Sbjct: 73 TIVSSGIGEETYSPKIVLAGQEDSPSLKDSLSEIEEIMYDTLDKLFAKTGVSPSEIDVLV 132
Query: 188 VNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIV 247
VNVSL SP+PSLT+RIINRY ++ DIK++NLSGMGCSAS++A+D+ + +F+ +K+ A+V
Sbjct: 133 VNVSLLSPSPSLTARIINRYKMKEDIKSYNLSGMGCSASLLAIDIARNIFKFHKDAFAVV 192
Query: 248 VSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSND 307
VSTESMGPNWYCGREKSMMLSN LFR GGCSMLLTN RA+KH+A+ KLN LVRTH GSND
Sbjct: 193 VSTESMGPNWYCGREKSMMLSNCLFRVGGCSMLLTNKRAMKHRALFKLNTLVRTHLGSND 252
Query: 308 EAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYEN 367
EAY CC+Q+ED G+ GF LTK+LTKAAAL+FT NL+ LVPK+LPL + RYVI S
Sbjct: 253 EAYNCCIQIEDSLGYRGFCLTKKLTKAAALSFTENLKALVPKVLPLWQLLRYVISS---- 308
Query: 368 RIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALH 427
R K S E V AGL+ K G+EHFC+HPGGRAVIDG GK L L EYDLEPARMALH
Sbjct: 309 RFGKKNDSPVLELV-AAGLDFKTGVEHFCIHPGGRAVIDGVGKSLGLTEYDLEPARMALH 367
Query: 428 RFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLEDPNVWKDC 487
RFGNTSAGGLWYVLGYMEAKKRLKKGDRILMIS GAGFKCNNCVW+VMKDL+D NVW+DC
Sbjct: 368 RFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISFGAGFKCNNCVWQVMKDLKDANVWEDC 427
Query: 488 IDRYPPKSLANPFQERYSWLNDEYLSFVRL 517
I YPPKS+ NPF E+Y W+ND SFV+L
Sbjct: 428 IASYPPKSIVNPFIEKYGWINDPSASFVKL 457
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356536510|ref|XP_003536780.1| PREDICTED: 3-ketoacyl-CoA synthase 21-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/464 (68%), Positives = 372/464 (80%), Gaps = 15/464 (3%)
Query: 68 YIIFHLYKWVLQKRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLK 127
Y F LYK +L++RGQ CYMLAYEC+ P ++T +LDT+S A++V RNKKL LEE RFLLK
Sbjct: 14 YSFFTLYKLILERRGQPCYMLAYECFMPPEDT-KLDTDSAAKIVLRNKKLRLEELRFLLK 72
Query: 128 NMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLV 187
+VSSGIGE TY PR V+EGREE P+L + + E+DEI+FDTLD LF +T ISPSEID LV
Sbjct: 73 TIVSSGIGENTYCPRTVLEGREECPTLKDTYEEIDEIMFDTLDNLFKKTGISPSEIDFLV 132
Query: 188 VNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIV 247
VNVSLFSPAPSLT+RIINRY +R +IKAFNL+GMGCSASVVA+D+VQQLF+TYKN + IV
Sbjct: 133 VNVSLFSPAPSLTARIINRYKMRENIKAFNLAGMGCSASVVAIDVVQQLFKTYKNSVGIV 192
Query: 248 VSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSND 307
VSTE +G +WYCGR+K MMLSN LFRSGGCSM+ TN +LK +AILKL + RT +G++D
Sbjct: 193 VSTEDLGAHWYCGRDKKMMLSNCLFRSGGCSMMFTNKASLKSRAILKLKHMERTQYGADD 252
Query: 308 EAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYEN 367
EAY CC+QVED+ G+ GFRLTK L K+AA A T+NLQ + PKILPL E R+ S +
Sbjct: 253 EAYNCCIQVEDELGYSGFRLTKSLVKSAAQALTVNLQTMAPKILPLWEMVRFFFASIRYS 312
Query: 368 RIR--------------KSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLE 413
++ K VLG GLN KAGIEHFC+HPGGRAVIDG GKGL
Sbjct: 313 GMKKRELLPFLTGMVLGKGNKKKTKFNVLGGGLNFKAGIEHFCVHPGGRAVIDGVGKGLR 372
Query: 414 LDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWE 473
L+EYDLEPARMALHR+GNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWE
Sbjct: 373 LNEYDLEPARMALHRWGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWE 432
Query: 474 VMKDLEDPNVWKDCIDRYPPKSLANPFQERYSWLNDEYLSFVRL 517
VM+DL D NVWKDCI+ YPP +L NPF+E+Y W+NDEYLSFVRL
Sbjct: 433 VMRDLSDTNVWKDCIESYPPNTLNNPFKEKYDWINDEYLSFVRL 476
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297810541|ref|XP_002873154.1| beta-ketoacyl-CoA synthase family protein [Arabidopsis lyrata subsp. lyrata] gi|297318991|gb|EFH49413.1| beta-ketoacyl-CoA synthase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 635 bits (1639), Expect = e-179, Method: Compositional matrix adjust.
Identities = 295/452 (65%), Positives = 377/452 (83%), Gaps = 9/452 (1%)
Query: 70 IFHLYKWVLQKRGQ-CCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKN 128
+F++ K+VL++R Q CYML YECYK DE R+LDTE+CA+VV RNK LGLEEYRFLL+
Sbjct: 17 VFYISKFVLKRRNQRKCYMLHYECYKGMDE-RKLDTETCAKVVQRNKNLGLEEYRFLLRT 75
Query: 129 MVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTD--ISPSEIDVL 186
M SSGIGEETYGPRNV++GRE+SP+L +A SEMDEI+FDTLDKLF +T ISPS+ID+L
Sbjct: 76 MASSGIGEETYGPRNVLDGREDSPTLLDAHSEMDEIMFDTLDKLFHKTKGLISPSDIDIL 135
Query: 187 VVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAI 246
VVNVSLF+P+PSLTSR+INRY +R DIK+FNLSG+GCSASV+++D+VQ++F T +N +A+
Sbjct: 136 VVNVSLFAPSPSLTSRVINRYKMREDIKSFNLSGLGCSASVISIDIVQRIFETTENAIAL 195
Query: 247 VVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSN 306
VVSTE+MGP+WYCG+++SMMLSN LFR+GG S+LLTN K++A++KL +VR H GS+
Sbjct: 196 VVSTETMGPHWYCGKDRSMMLSNCLFRAGGSSVLLTNAARFKNRALMKLVTVVRAHVGSD 255
Query: 307 DEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYE 366
DEAY CCMQ+ED+ GHPGF LTK L KAAA A T NLQVL+P++LP++E RY I
Sbjct: 256 DEAYSCCMQMEDRDGHPGFLLTKYLKKAAARALTKNLQVLLPRVLPVKELIRYAIV---- 311
Query: 367 NRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMAL 426
+++ T++ + A G GLNLK G++HFC+HPGGRA+I+G GK L L E+D+EPARMAL
Sbjct: 312 RALKRRTTAKREPASSGIGLNLKTGLQHFCIHPGGRAIIEGVGKSLGLTEFDIEPARMAL 371
Query: 427 HRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLEDPNVWKD 486
HRFGNTS+GGLWYVLGYMEAK RLKKG++ILM+S+GAGF+ NNCVWEV+KDL+D NVW D
Sbjct: 372 HRFGNTSSGGLWYVLGYMEAKNRLKKGEKILMMSMGAGFESNNCVWEVLKDLDDKNVWDD 431
Query: 487 CIDRYPPKS-LANPFQERYSWLNDEYLSFVRL 517
+DRYP S + NPF E+Y W+ND+ +SFVR+
Sbjct: 432 SVDRYPELSRIPNPFVEKYDWINDDTMSFVRV 463
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15238194|ref|NP_196073.1| 3-ketoacyl-CoA synthase 21 [Arabidopsis thaliana] gi|75311720|sp|Q9LZ72.1|KCS21_ARATH RecName: Full=3-ketoacyl-CoA synthase 21; Short=KCS-21; AltName: Full=Very long-chain fatty acid condensing enzyme 21; Short=VLCFA condensing enzyme 21 gi|7406457|emb|CAB85559.1| fatty acid elongase-like protein [Arabidopsis thaliana] gi|26449447|dbj|BAC41850.1| putative fatty acid elongase [Arabidopsis thaliana] gi|28951053|gb|AAO63450.1| At5g04530 [Arabidopsis thaliana] gi|332003374|gb|AED90757.1| 3-ketoacyl-CoA synthase 21 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 634 bits (1636), Expect = e-179, Method: Compositional matrix adjust.
Identities = 294/452 (65%), Positives = 378/452 (83%), Gaps = 9/452 (1%)
Query: 70 IFHLYKWVLQKRGQ-CCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKN 128
+F+++K+V ++R Q CYML YECYK +E R+LDTE+CA+VV RNK LGLEEYRFLL+
Sbjct: 17 VFYIFKFVFKRRNQRNCYMLHYECYKGMEE-RKLDTETCAKVVQRNKNLGLEEYRFLLRT 75
Query: 129 MVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFART--DISPSEIDVL 186
M SSGIGEETYGPRNV+EGRE+SP+L +A SEMDEI+FDTLDKLF +T ISPS+ID+L
Sbjct: 76 MASSGIGEETYGPRNVLEGREDSPTLLDAHSEMDEIMFDTLDKLFHKTKGSISPSDIDIL 135
Query: 187 VVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAI 246
VVNVSLF+P+PSLTSR+INRY +R DIK++NLSG+GCSASV+++D+VQ++F T +N LA+
Sbjct: 136 VVNVSLFAPSPSLTSRVINRYKMREDIKSYNLSGLGCSASVISIDIVQRMFETRENALAL 195
Query: 247 VVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSN 306
VVSTE+MGP+WYCG+++SMMLSN LFR+GG S+LLTN K++A++KL +VR H GS+
Sbjct: 196 VVSTETMGPHWYCGKDRSMMLSNCLFRAGGSSVLLTNAARFKNQALMKLVTVVRAHVGSD 255
Query: 307 DEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYE 366
DEAY CC+Q+ED+ GHPGF LTK L KAAA A T NLQVL+P++LP++E RY I
Sbjct: 256 DEAYSCCIQMEDRDGHPGFLLTKYLKKAAARALTKNLQVLLPRVLPVKELIRYAIV---- 311
Query: 367 NRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMAL 426
+++ TS+ + A G GLNLK G++HFC+HPGGRA+I+G GK L L E+D+EPARMAL
Sbjct: 312 RALKRRTSAKREPASSGIGLNLKTGLQHFCIHPGGRAIIEGVGKSLGLTEFDIEPARMAL 371
Query: 427 HRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLEDPNVWKD 486
HRFGNTS+GGLWYVLGYMEAK RLKKG++ILM+S+GAGF+ NNCVWEV+KDL+D NVW+D
Sbjct: 372 HRFGNTSSGGLWYVLGYMEAKNRLKKGEKILMMSMGAGFESNNCVWEVLKDLDDKNVWED 431
Query: 487 CIDRYPPKS-LANPFQERYSWLNDEYLSFVRL 517
+DRYP S + NPF E+Y W+ND+ +SFVR+
Sbjct: 432 SVDRYPELSRIPNPFVEKYDWINDDTMSFVRV 463
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 517 | ||||||
| TAIR|locus:2184387 | 464 | KCS19 "3-ketoacyl-CoA synthase | 0.847 | 0.943 | 0.635 | 4.1e-159 | |
| TAIR|locus:2065499 | 476 | KCS12 "3-ketoacyl-CoA synthase | 0.839 | 0.911 | 0.556 | 5.1e-138 | |
| TAIR|locus:2026600 | 478 | KCS3 "3-ketoacyl-CoA synthase | 0.841 | 0.910 | 0.547 | 4.7e-135 | |
| TAIR|locus:2200955 | 528 | KCS1 "3-ketoacyl-CoA synthase | 0.781 | 0.765 | 0.397 | 2.4e-83 | |
| TAIR|locus:2201262 | 497 | KCS6 "3-ketoacyl-CoA synthase | 0.762 | 0.792 | 0.402 | 1.5e-81 | |
| TAIR|locus:2031260 | 492 | KCS5 "3-ketoacyl-CoA synthase | 0.762 | 0.800 | 0.405 | 3.2e-81 | |
| TAIR|locus:2057706 | 550 | KCS10 "3-ketoacyl-CoA synthase | 0.568 | 0.534 | 0.347 | 2.2e-80 | |
| TAIR|locus:2062775 | 466 | KCS13 "3-ketoacyl-CoA synthase | 0.775 | 0.860 | 0.387 | 4.7e-80 | |
| TAIR|locus:2139579 | 487 | KCS17 "3-ketoacyl-CoA synthase | 0.783 | 0.831 | 0.396 | 2e-79 | |
| TAIR|locus:2016397 | 516 | KCS4 "3-ketoacyl-CoA synthase | 0.762 | 0.763 | 0.388 | 2.6e-79 |
| TAIR|locus:2184387 KCS19 "3-ketoacyl-CoA synthase 19" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1550 (550.7 bits), Expect = 4.1e-159, P = 4.1e-159
Identities = 284/447 (63%), Positives = 364/447 (81%)
Query: 75 KWVLQKRGQC-CYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSG 133
K+V ++R Q CYML YECYK +E R+LDTE+CA+VV RNK LGLEEYRFLL+ M SSG
Sbjct: 22 KFVFKRRNQRNCYMLHYECYKGMEE-RKLDTETCAKVVQRNKNLGLEEYRFLLRTMASSG 80
Query: 134 IGEETYGPRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFART--DISPSEIDVLVVNVS 191
IGEETYGPRNV+EGRE+SP+L +A SEMDEI+FDTLDKLF +T ISPS+ID+LVVNVS
Sbjct: 81 IGEETYGPRNVLEGREDSPTLLDAHSEMDEIMFDTLDKLFHKTKGSISPSDIDILVVNVS 140
Query: 192 LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTE 251
LF+P+PSLTSR+INRY +R DIK++NLSG+GCSASV+++D+VQ++F T +N LA+VVSTE
Sbjct: 141 LFAPSPSLTSRVINRYKMREDIKSYNLSGLGCSASVISIDIVQRMFETRENALALVVSTE 200
Query: 252 SMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYE 311
+MGP+WYCG+++SMMLSN LFR+GG S+LLTN K++A++KL +VR H GS+DEAY
Sbjct: 201 TMGPHWYCGKDRSMMLSNCLFRAGGSSVLLTNAARFKNQALMKLVTVVRAHVGSDDEAYS 260
Query: 312 CCMQVEDQQGHPGFRXXXXXXXXXXXXFTMNLQVLVPKILPLREQFRYVIQSYYENRIRK 371
CC+Q+ED+ GHPGF T NLQVL+P++LP++E RY I +++
Sbjct: 261 CCIQMEDRDGHPGFLLTKYLKKAAARALTKNLQVLLPRVLPVKELIRYAIV----RALKR 316
Query: 372 STSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGN 431
TS+ + A G GLNLK G++HFC+HPGGRA+I+G GK L L E+D+EPARMALHRFGN
Sbjct: 317 RTSAKREPASSGIGLNLKTGLQHFCIHPGGRAIIEGVGKSLGLTEFDIEPARMALHRFGN 376
Query: 432 TSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLEDPNVWKDCIDRY 491
TS+GGLWYVLGYMEAK RLKKG++ILM+S+GAGF+ NNCVWEV+KDL+D NVW+D +DRY
Sbjct: 377 TSSGGLWYVLGYMEAKNRLKKGEKILMMSMGAGFESNNCVWEVLKDLDDKNVWEDSVDRY 436
Query: 492 PPKS-LANPFQERYSWLNDEYLSFVRL 517
P S + NPF E+Y W+ND+ +SFVR+
Sbjct: 437 PELSRIPNPFVEKYDWINDDTMSFVRV 463
|
|
| TAIR|locus:2065499 KCS12 "3-ketoacyl-CoA synthase 12" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1351 (480.6 bits), Expect = 5.1e-138, P = 5.1e-138
Identities = 248/446 (55%), Positives = 327/446 (73%)
Query: 76 WVL--QKRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSG 133
W L K+ + CY+L Y+C+KP D+ R + T+ +++RN+ LGL EY+FLLK +VSSG
Sbjct: 20 WKLIDSKQDKDCYILDYQCHKPTDD-RMVSTQFSGEIIYRNQNLGLTEYKFLLKAIVSSG 78
Query: 134 IGEETYGPRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLF 193
IGE+TY PR V EGREE PSL + SEM+E D++ KL R ISP +ID+LVVNVS+
Sbjct: 79 IGEQTYAPRLVFEGREERPSLQDGISEMEEFYVDSIGKLLERNQISPKDIDILVVNVSML 138
Query: 194 SPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESM 253
S PSL SRIIN Y +R+D+K FNL+GMGCSAS+++VD+V+ +F++Y NKLA+V ++ES+
Sbjct: 139 SSTPSLASRIINHYKMRDDVKVFNLTGMGCSASLISVDIVKNIFKSYANKLALVATSESL 198
Query: 254 GPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECC 313
PNWY G +SM+L+N LFRSGGC++LLTN R+L+ KA+ KL C+VRTH G+ +E+Y CC
Sbjct: 199 SPNWYSGNNRSMILANCLFRSGGCAILLTNKRSLRKKAMFKLKCMVRTHHGAREESYNCC 258
Query: 314 MQVEDQQGHPGFRXXXXXXXXXXXXFTMNLQVLVPKILPLREQFRYVIQSYYEN-RIRKS 372
+Q ED+QG GF F NL+V+ PKILP+ E R++++ + +IR++
Sbjct: 259 IQAEDEQGRVGFYLGKNLPKAATRAFVENLKVITPKILPVTELIRFMLKLLIKKIKIRQN 318
Query: 373 TS--STK--PEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHR 428
S ST P L AG+N K GIEHFC+H GG+AVIDG G L+L+EYD+EPARM LHR
Sbjct: 319 PSKGSTNLPPGTPLKAGINFKTGIEHFCIHTGGKAVIDGIGHSLDLNEYDIEPARMTLHR 378
Query: 429 FGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDL----EDPNVW 484
FGNTSA LWYVL YMEAKKRLK+GDR+ MIS GAGFKCN+CVWEV++DL NVW
Sbjct: 379 FGNTSASSLWYVLAYMEAKKRLKRGDRVFMISFGAGFKCNSCVWEVVRDLTGGESKGNVW 438
Query: 485 KDCIDRYPPKSLANPFQERYSWLNDE 510
CID YPPKS+ NP+ E++ W+ DE
Sbjct: 439 NHCIDDYPPKSILNPYLEKFGWIQDE 464
|
|
| TAIR|locus:2026600 KCS3 "3-ketoacyl-CoA synthase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1323 (470.8 bits), Expect = 4.7e-135, P = 4.7e-135
Identities = 244/446 (54%), Positives = 327/446 (73%)
Query: 75 KWVLQKRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGI 134
K + KR Q CY+L Y+C+KP D+ R ++T+ ++ RNK L L EY+FLLK +VSSGI
Sbjct: 21 KRIDSKRDQNCYILDYQCHKPSDD-RMVNTQFSGDIILRNKHLRLNEYKFLLKAIVSSGI 79
Query: 135 GEETYGPRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFS 194
GE+TY PR EGRE+ P+L + SEM+E DT++K+ R ISPSEID+LVVNVS+ +
Sbjct: 80 GEQTYAPRLFFEGREQRPTLQDGLSEMEEFYIDTIEKVLKRNKISPSEIDILVVNVSMLN 139
Query: 195 PAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMG 254
PSL++RIIN Y +R DIK FNL+ MGCSASV+++D+V+ +F+TYKNKLA+VV++ES+
Sbjct: 140 STPSLSARIINHYKMREDIKVFNLTAMGCSASVISIDIVKNIFKTYKNKLALVVTSESLS 199
Query: 255 PNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCM 314
PNWY G +SM+L+N LFRSGGC++LLTN R+L +A+ KL CLVRTH G+ D+++ C+
Sbjct: 200 PNWYSGNNRSMILANCLFRSGGCAVLLTNKRSLSRRAMFKLRCLVRTHHGARDDSFNACV 259
Query: 315 QVEDQQGHPGFRXXXXXXXXXXXXFTMNLQVLVPKILPLREQFRYVI----QSYYENRIR 370
Q ED+ GH G F NL+V+ PKILP+ E R+++ + + +
Sbjct: 260 QKEDELGHIGVHLDKTLPKAATRAFIDNLKVITPKILPVTELLRFMLCLLLKKLRSSPSK 319
Query: 371 KSTSSTK--PEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHR 428
ST+ T+ P+A + AG+N K GI+HFC+H GG+AVID G L+L+EYDLEPARM LHR
Sbjct: 320 GSTNVTQAAPKAGVKAGINFKTGIDHFCIHTGGKAVIDAIGYSLDLNEYDLEPARMTLHR 379
Query: 429 FGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLEDP----NVW 484
FGNTSA LWYVLGYMEAKKRLK+GDR+ MIS GAGFKCN+CVWEV++DL NVW
Sbjct: 380 FGNTSASSLWYVLGYMEAKKRLKRGDRVFMISFGAGFKCNSCVWEVVRDLNVGEAVGNVW 439
Query: 485 KDCIDRYPPKSLANPFQERYSWLNDE 510
CI++YPPKS+ NPF E+Y W+++E
Sbjct: 440 NHCINQYPPKSILNPFFEKYGWIHEE 465
|
|
| TAIR|locus:2200955 KCS1 "3-ketoacyl-CoA synthase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 835 (299.0 bits), Expect = 2.4e-83, P = 2.4e-83
Identities = 166/418 (39%), Positives = 250/418 (59%)
Query: 81 RGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYG 140
R + Y++ + CYKP DE R++ +S + N + +F + +G+G+ETY
Sbjct: 118 RSKPVYLVDFSCYKPEDE-RKISVDSFLTMTEENGSFTDDTVQFQQRISNRAGLGDETYL 176
Query: 141 PRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLT 200
PR + + +++EA +E + ++F LD LF +T I P+E+ +L+VN SLF+P PSL+
Sbjct: 177 PRGITSTPPKL-NMSEARAEAEAVMFGALDSLFEKTGIKPAEVGILIVNCSLFNPTPSLS 235
Query: 201 SRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCG 260
+ I+N Y +R DIK++NL GMGCSA ++++DL L + N A+VVSTE++ NWY G
Sbjct: 236 AMIVNHYKMREDIKSYNLGGMGCSAGLISIDLANNLLKANPNSYAVVVSTENITLNWYFG 295
Query: 261 REKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQ 320
++SM+L N +FR GG ++LL+N R + K+ L +VRTH GS+D+ Y C Q ED++
Sbjct: 296 NDRSMLLCNCIFRMGGAAILLSNRRQDRKKSKYSLVNVVRTHKGSDDKNYNCVYQKEDER 355
Query: 321 GHPGFRXXXXXXXXXXXXFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEA 380
G G N+ L P +LPL EQ ++I S + ++ K KP
Sbjct: 356 GTIGVSLARELMSVAGDALKTNITTLGPMVLPLSEQLMFLI-SLVKRKMFKL--KVKPYI 412
Query: 381 VLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYV 440
+ K EHFC+H GGRAV+D K L+L ++ +EP+RM LHRFGNTS+ LWY
Sbjct: 413 P-----DFKLAFEHFCIHAGGRAVLDEVQKNLDLKDWHMEPSRMTLHRFGNTSSSSLWYE 467
Query: 441 LGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLEDP----NVWKDCIDRYPPK 494
+ Y EAK R+K GDR+ I+ G+GFKCN+ VW+ ++ + N W ID+YP K
Sbjct: 468 MAYTEAKGRVKAGDRLWQIAFGSGFKCNSAVWKALRPVSTEEMTGNAWAGSIDQYPVK 525
|
|
| TAIR|locus:2201262 KCS6 "3-ketoacyl-CoA synthase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 818 (293.0 bits), Expect = 1.5e-81, P = 1.5e-81
Identities = 166/412 (40%), Positives = 253/412 (61%)
Query: 86 YMLAYECYKPCDETRRLDTESC---ARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPR 142
Y++ Y CYKP T R+ + +R++ ++K +E F ++ + SG+GEET P
Sbjct: 90 YLVDYSCYKP-PVTCRVPFATFMEHSRLILKDKPKSVE---FQMRILERSGLGEETCLPP 145
Query: 143 NVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSR 202
+ +P++ A SE +IF+ +D LF +T + P ++D+L+VN SLFSP PSL++
Sbjct: 146 -AIHYIPPTPTMDAARSEAQMVIFEAMDDLFKKTGLKPKDVDILIVNCSLFSPTPSLSAM 204
Query: 203 IINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGRE 262
+IN+Y LR++IK+FNLSGMGCSA +++VDL + L + + N AI+VSTE + PN+Y G E
Sbjct: 205 VINKYKLRSNIKSFNLSGMGCSAGLISVDLARDLLQVHPNSNAIIVSTEIITPNYYQGNE 264
Query: 263 KSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGH 322
++M+L N LFR G ++ ++N R+ + +A KL+ LVRTH G++D+++ C + ED++GH
Sbjct: 265 RAMLLPNCLFRMGAAAIHMSNRRSDRWRAKYKLSHLVRTHRGADDKSFYCVYEQEDKEGH 324
Query: 323 PGFRXXXXXXXXXXXXFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVL 382
G N+ + P +LP EQ + + S +I KP
Sbjct: 325 VGINLSKDLMAIAGEALKANITTIGPLVLPASEQLLF-LTSLIGRKI--FNPKWKPYIP- 380
Query: 383 GAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLG 442
+ K EHFC+H GGRAVID K L+L +E +RM LHRFGNTS+ LWY L
Sbjct: 381 ----DFKLAFEHFCIHAGGRAVIDELQKNLQLSGEHVEASRMTLHRFGNTSSSSLWYELS 436
Query: 443 YMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLEDPN--VWKDCIDRYP 492
Y+E+K R+++GDR+ I+ G+GFKCN+ VW+ + ++ P W DCIDRYP
Sbjct: 437 YIESKGRMRRGDRVWQIAFGSGFKCNSAVWKCNRTIKTPKDGPWSDCIDRYP 488
|
|
| TAIR|locus:2031260 KCS5 "3-ketoacyl-CoA synthase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 815 (292.0 bits), Expect = 3.2e-81, P = 3.2e-81
Identities = 167/412 (40%), Positives = 251/412 (60%)
Query: 86 YMLAYECYKPCDETRRLDTESC---ARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPR 142
Y++ Y CYKP T R+ S +R++ ++ +E F ++ + SG+GEET P
Sbjct: 85 YLVDYSCYKP-PVTCRVPFSSFMEHSRLILKDNPKSVE---FQMRILERSGLGEETCLPP 140
Query: 143 NVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSR 202
+ +P++ A +E +IF ++ LF T + P +ID+L+VN SLFSP PSL++
Sbjct: 141 -AIHYIPPTPTMESARNEAQMVIFTAMEDLFKNTGLKPKDIDILIVNCSLFSPTPSLSAM 199
Query: 203 IINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGRE 262
IIN+Y LR++IK++NLSGMGCSAS+++VD+ + L + + N AI++STE + PN+Y G E
Sbjct: 200 IINKYKLRSNIKSYNLSGMGCSASLISVDVARDLLQVHPNSNAIIISTEIITPNYYKGNE 259
Query: 263 KSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGH 322
++M+L N LFR GG ++LL+N R+ + +A KL LVRTH G++D++Y C M+ ED+ G+
Sbjct: 260 RAMLLPNCLFRMGGAAILLSNRRSDRWRAKYKLCHLVRTHRGADDKSYNCVMEQEDKNGN 319
Query: 323 PGFRXXXXXXXXXXXXFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVL 382
G N+ + P +LP EQ + + S +I KP
Sbjct: 320 VGINLSKDLMTIAGEALKANITTIGPLVLPASEQLLF-LSSLIGRKI--FNPKWKPYIP- 375
Query: 383 GAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLG 442
+ K EHFC+H GGRAVID K L+L +E +RM LHRFGNTS+ LWY L
Sbjct: 376 ----DFKQAFEHFCIHAGGRAVIDELQKNLQLSGEHVEASRMTLHRFGNTSSSSLWYELS 431
Query: 443 YMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLEDPN--VWKDCIDRYP 492
Y+EA+ R+K+ DR+ I+ G+GFKCN+ VW+ + ++ P W DCI+RYP
Sbjct: 432 YIEAQGRMKRNDRVWQIAFGSGFKCNSAVWKCNRTIKTPTDGAWSDCIERYP 483
|
|
| TAIR|locus:2057706 KCS10 "3-ketoacyl-CoA synthase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 514 (186.0 bits), Expect = 2.2e-80, Sum P(2) = 2.2e-80
Identities = 104/299 (34%), Positives = 170/299 (56%)
Query: 81 RGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYG 140
R + Y++ + CYKP DE ++ E + ++ K E F + + +SGIG+ETY
Sbjct: 117 RPRSVYLIDFACYKPSDE-HKVTKEEFIELARKSGKFDEETLGFKKRILQASGIGDETYV 175
Query: 141 PRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLT 200
PR++ E ++ E E +IF LD+LF +T + P ++ VLVVN S+F+P PSL+
Sbjct: 176 PRSI-SSSENITTMKEGREEASTVIFGALDELFEKTRVKPKDVGVLVVNCSIFNPTPSLS 234
Query: 201 SRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCG 260
+ +IN Y +R +I ++NL GMGCSA ++A+DL + + ++ N A+VVSTE +G NWY G
Sbjct: 235 AMVINHYKMRGNILSYNLGGMGCSAGIIAIDLARDMLQSNPNSYAVVVSTEMVGYNWYVG 294
Query: 261 REKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQ 320
+KSM++ N FR G +++L+N R A +L +VRTH ++D ++ Q ED+Q
Sbjct: 295 SDKSMVIPNCFFRMGCSAVMLSNRRRDFRHAKYRLEHIVRTHKAADDRSFRSVYQEEDEQ 354
Query: 321 GHPGFRXXXXXXXXXXXXFTMNLQVLVPKILPLREQ---FRYVIQSYYENRIRKSTSST 376
G G + N+ L P +LP EQ F +++ + + ST+++
Sbjct: 355 GFKGLKISRDLMEVGGEALKTNITTLGPLVLPFSEQLLFFAALLRRTFSPAAKTSTTTS 413
|
|
| TAIR|locus:2062775 KCS13 "3-ketoacyl-CoA synthase 13" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 804 (288.1 bits), Expect = 4.7e-80, P = 4.7e-80
Identities = 162/418 (38%), Positives = 249/418 (59%)
Query: 81 RGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEE-YRFLLKNMVSSGIGEETY 139
R + Y++ + C++P D + + +E+ + + +L +E +F+ + + SG+G++TY
Sbjct: 56 RSKPVYLVDFSCHQPTDSCK-ISSETFFNMA-KGAQLYTDETIQFMTRILNRSGLGDDTY 113
Query: 140 GPRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSL 199
PR ++ +PS+ EA E + +IF L+ LF +T I P E+ + +VN SLF+P PSL
Sbjct: 114 SPRCMLTS-PPTPSMYEARHESELVIFGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSL 172
Query: 200 TSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYC 259
+S I+NRY L+ D+K +NLSGMGCSA ++VDL L + N A++VSTE+M + Y
Sbjct: 173 SSMIVNRYKLKTDVKTYNLSGMGCSAGAISVDLATNLLKANPNTYAVIVSTENMTLSMYR 232
Query: 260 GREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQ 319
G ++SM++ N LFR GG +++L+N + ++ +L +VRTH GS+D+ Y C Q ED
Sbjct: 233 GNDRSMLVPNCLFRVGGAAVMLSNRSQDRVRSKYELTHIVRTHKGSSDKHYTCAEQKEDS 292
Query: 320 QGHPGFRXXXXXXXXXXXXFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPE 379
+G G NL L P +LPL E+ R+++ R S P+
Sbjct: 293 KGIVGVALSKELTVVAGDSLKTNLTALGPLVLPLSEKLRFILFLVKSKLFRLKVSPYVPD 352
Query: 380 AVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWY 439
K +HFC+H GGRA++D KGL L E+DLEP+RM LHRFGNTS+ LWY
Sbjct: 353 --------FKLCFKHFCIHAGGRALLDAVEKGLGLSEFDLEPSRMTLHRFGNTSSSSLWY 404
Query: 440 VLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDL---ED--PNVWKDCIDRYP 492
L Y+EAK R+K+GDR+ ++ G+GFKCN+ VW ++ + E N W D + +YP
Sbjct: 405 ELAYVEAKCRVKRGDRVWQLAFGSGFKCNSIVWRALRTIPANESLVGNPWGDSVHKYP 462
|
|
| TAIR|locus:2139579 KCS17 "3-ketoacyl-CoA synthase 17" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 798 (286.0 bits), Expect = 2.0e-79, P = 2.0e-79
Identities = 165/416 (39%), Positives = 242/416 (58%)
Query: 81 RGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYG 140
R + Y+L Y CY P ++++ + + F K ++ SG+GEETY
Sbjct: 78 RPRSIYLLDYSCYLP-PSSQKVSYQKFMNNSSLIQDFSETSLEFQRKILIRSGLGEETYL 136
Query: 141 PRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLT 200
P ++ P++A A E +++IF LD LF T I+P EI VLVVN SLF+P PSL+
Sbjct: 137 PDSI-HSIPPRPTMAAAREEAEQVIFGALDNLFENTKINPREIGVLVVNCSLFNPTPSLS 195
Query: 201 SRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCG 260
+ I+N+Y LR +IK+FNL GMGCSA V+AVDL + + ++N A+VVSTE++ NWY G
Sbjct: 196 AMIVNKYKLRGNIKSFNLGGMGCSAGVIAVDLASDMLQIHRNTFALVVSTENITQNWYFG 255
Query: 261 REKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQ 320
+K+M++ N LFR GG ++LL+N + ++ KL VRTH GS++ A+ C Q +D+
Sbjct: 256 NKKAMLIPNCLFRVGGSAVLLSNKPLDRKRSKYKLVHTVRTHKGSDENAFNCVYQEQDEC 315
Query: 321 GHPGFRXXXXXXXXXXXXFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEA 380
G N+ L P +LP+ EQ + ++ R+ KP
Sbjct: 316 LKTGVSLSKDLMAIAGEALKTNITSLGPLVLPISEQILF-FATFVAKRLFNDKKK-KPYI 373
Query: 381 VLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYV 440
+ K ++HFC+H GGRAVID K L+L +E +RM LHRFGNTS+ +WY
Sbjct: 374 P-----DFKLALDHFCIHAGGRAVIDELEKSLKLSPKHVEASRMTLHRFGNTSSSSIWYE 428
Query: 441 LGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLEDP--NVWKDCIDRYPPK 494
L Y EAK R++KG+R+ I+ G+GFKCN+ VW ++++E N W+ CI RYP K
Sbjct: 429 LAYTEAKGRMRKGNRVWQIAFGSGFKCNSAVWVALRNVEPSVNNPWEHCIHRYPVK 484
|
|
| TAIR|locus:2016397 KCS4 "3-ketoacyl-CoA synthase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 797 (285.6 bits), Expect = 2.6e-79, P = 2.6e-79
Identities = 160/412 (38%), Positives = 246/412 (59%)
Query: 86 YMLAYECYKPCDETRRLDTESCARVVWRNKKLG-LEE--YRFLLKNMVSSGIGEETYGPR 142
Y++ + CY P D + AR + ++ G ++ F K + SG+GE+TY P
Sbjct: 113 YLVDFSCYLPPDHLKA----PYARFMEHSRLTGDFDDSALEFQRKILERSGLGEDTYVPE 168
Query: 143 NVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSR 202
+ S+A A E ++++F LD LFA T++ P +I +LVVN SLF+P PSL++
Sbjct: 169 -AMHYVPPRISMAAAREEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAM 227
Query: 203 IINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGRE 262
I+N+Y LR +I+++NL GMGCSA V+AVDL + + ++N A+VVSTE++ NWY G +
Sbjct: 228 IVNKYKLRGNIRSYNLGGMGCSAGVIAVDLAKDMLLVHRNTYAVVVSTENITQNWYFGNK 287
Query: 263 KSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGH 322
KSM++ N LFR GG ++LL+N K ++ +L +VRTH G++D+A+ C Q +D G
Sbjct: 288 KSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYRLVHVVRTHRGADDKAFRCVYQEQDDTGR 347
Query: 323 PGFRXXXXXXXXXXXXFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVL 382
G N+ L P +LP+ EQ + + + K + K + +
Sbjct: 348 TGVSLSKDLMAIAGETLKTNITTLGPLVLPISEQILF-----FMTLVVKKLFNGKVKPYI 402
Query: 383 GAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLG 442
+ K EHFC+H GGRAVID K L+L +E +RM LHRFGNTS+ +WY L
Sbjct: 403 P---DFKLAFEHFCIHAGGRAVIDELEKNLQLSPVHVEASRMTLHRFGNTSSSSIWYELA 459
Query: 443 YMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLEDPN--VWKDCIDRYP 492
Y+EAK R+++G+R+ I+ G+GFKCN+ +WE ++ ++ N W+DCID+YP
Sbjct: 460 YIEAKGRMRRGNRVWQIAFGSGFKCNSAIWEALRHVKPSNNSPWEDCIDKYP 511
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9LZ72 | KCS21_ARATH | 2, ., 3, ., 1, ., - | 0.6504 | 0.8568 | 0.9547 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.3.1 | 0.766 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 517 | |||
| pfam08392 | 290 | pfam08392, FAE1_CUT1_RppA, FAE1/Type III polyketid | 1e-142 | |
| PLN02854 | 521 | PLN02854, PLN02854, 3-ketoacyl-CoA synthase | 1e-121 | |
| PLN02377 | 502 | PLN02377, PLN02377, 3-ketoacyl-CoA synthase | 1e-114 | |
| PLN02932 | 478 | PLN02932, PLN02932, 3-ketoacyl-CoA synthase | 1e-112 | |
| PLN00415 | 466 | PLN00415, PLN00415, 3-ketoacyl-CoA synthase | 1e-110 | |
| PLN02192 | 511 | PLN02192, PLN02192, 3-ketoacyl-CoA synthase | 1e-110 | |
| cd00831 | 361 | cd00831, CHS_like, Chalcone and stilbene synthases | 1e-103 | |
| COG0332 | 323 | COG0332, FabH, 3-oxoacyl-[acyl-carrier-protein] | 1e-17 | |
| cd00830 | 320 | cd00830, KAS_III, Ketoacyl-acyl carrier protein sy | 5e-17 | |
| cd00827 | 324 | cd00827, init_cond_enzymes, "initiating" condensin | 8e-12 | |
| pfam08541 | 90 | pfam08541, ACP_syn_III_C, 3-Oxoacyl-[acyl-carrier- | 4e-11 | |
| COG3424 | 356 | COG3424, BcsA, Predicted naringenin-chalcone synth | 9e-10 | |
| TIGR00747 | 318 | TIGR00747, fabH, 3-oxoacyl-(acyl-carrier-protein) | 1e-07 | |
| COG3424 | 356 | COG3424, BcsA, Predicted naringenin-chalcone synth | 2e-07 | |
| pfam02797 | 151 | pfam02797, Chal_sti_synt_C, Chalcone and stilbene | 8e-07 | |
| PRK09352 | 319 | PRK09352, PRK09352, 3-oxoacyl-(acyl carrier protei | 1e-06 | |
| PLN03169 | 391 | PLN03169, PLN03169, chalcone synthase family prote | 1e-06 | |
| PRK05963 | 326 | PRK05963, PRK05963, 3-oxoacyl-(acyl carrier protei | 5e-06 | |
| PRK12879 | 325 | PRK12879, PRK12879, 3-oxoacyl-(acyl carrier protei | 9e-05 |
| >gnl|CDD|116972 pfam08392, FAE1_CUT1_RppA, FAE1/Type III polyketide synthase-like protein | Back alignment and domain information |
|---|
Score = 409 bits (1053), Expect = e-142
Identities = 128/286 (44%), Positives = 185/286 (64%), Gaps = 2/286 (0%)
Query: 77 VLQKRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGE 136
+R + Y++ Y CYKP D+ R++ TE+ + RN K E F K + SG+GE
Sbjct: 1 YFMRRPRPVYLVDYACYKPPDD-RKVSTETFMEHIRRNGKFDEESLDFQRKILERSGLGE 59
Query: 137 ETYGPRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPA 196
ETY PR+V+E P++AEA E +E++F +D+LFA+T + P +I +LVVN SLF+P
Sbjct: 60 ETYVPRSVLEIPPN-PTMAEAREEAEEVMFGAVDELFAKTGVRPRDIGILVVNCSLFNPT 118
Query: 197 PSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN 256
PSL++ I+NRY +R DIK++NLSGMGCSA ++++DL + L + + N A+VVSTE++ PN
Sbjct: 119 PSLSAMIVNRYKMRGDIKSYNLSGMGCSAGLISIDLAKDLLQVHPNTYALVVSTENITPN 178
Query: 257 WYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQV 316
WY G ++SM+L N LFR GG ++LL+N A + +A +L VRTH G++D AY C Q
Sbjct: 179 WYAGNDRSMLLPNCLFRMGGAAILLSNKPADRRRAKYELVHTVRTHKGADDRAYRCVYQE 238
Query: 317 EDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQ 362
ED+ G G L+K L A A N+ L P +LPL EQ R+
Sbjct: 239 EDEDGKVGVSLSKDLMAVAGDALKTNITTLGPLVLPLSEQLRFFAT 284
|
The members of this family are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region featured in this family contains the active site residues, as well as motifs involved in substrate binding. Length = 290 |
| >gnl|CDD|215459 PLN02854, PLN02854, 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Score = 366 bits (941), Expect = e-121
Identities = 175/439 (39%), Positives = 259/439 (58%), Gaps = 24/439 (5%)
Query: 60 LLYLLPLFYIIFHLYKWVLQKRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGL 119
LL+LL L++ KR + Y++ + CYKP DE R++ +S + N
Sbjct: 99 LLFLLGLYW----------AKRSKPVYLVDFACYKPEDE-RKISVDSFLTMTEENGSFED 147
Query: 120 EEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTDIS 179
E +F + SG+G+ETY PR + R + + EA +E + ++F LD LF++T +
Sbjct: 148 ETVQFQRRISTRSGLGDETYLPRGITS-RPPNLCMEEARAEAEAVMFGALDSLFSKTGVK 206
Query: 180 PSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239
P +I +L+VN SLF+P PSL++ I+N Y LR DIK++NL GMGCSA ++++DL L +
Sbjct: 207 PRDIGILIVNCSLFNPTPSLSAMIVNHYKLRTDIKSYNLGGMGCSAGLISIDLANDLLKA 266
Query: 240 YKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLV 299
N A+VVSTE++ NWY G ++SM+L N +FR GG ++LL+N + ++ +L V
Sbjct: 267 NPNSYAVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAVLLSNKARDRKRSKYQLVHTV 326
Query: 300 RTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRY 359
RTH G++D+ Y C Q ED +G G L ++L A A N+ L P +LPL EQF +
Sbjct: 327 RTHKGADDKNYNCVYQREDDKGTIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFMF 386
Query: 360 VIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDL 419
+ ++ P+ K EHFC+H GGRAV+D K L+L ++ +
Sbjct: 387 FVTLVRRKLLKAKVKPYIPD--------FKLAFEHFCIHAGGRAVLDELQKNLQLSDWHM 438
Query: 420 EPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDL- 478
EP+RM LHRFGNTS+ LWY L Y EAK R+ GDR+ I+ G+GFKCN+ VW+ ++++
Sbjct: 439 EPSRMTLHRFGNTSSSSLWYELAYTEAKGRVSAGDRVWQIAFGSGFKCNSAVWKALREIP 498
Query: 479 ---EDPNVWKDCIDRYPPK 494
N W D IDRYP K
Sbjct: 499 TGESTGNPWADSIDRYPVK 517
|
Length = 521 |
| >gnl|CDD|166018 PLN02377, PLN02377, 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Score = 347 bits (890), Expect = e-114
Identities = 175/435 (40%), Positives = 263/435 (60%), Gaps = 25/435 (5%)
Query: 68 YIIFHLYKWVLQKRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLG------LEE 121
+++F L +++ R + Y++ Y CY+ D + AR + ++ G LE
Sbjct: 82 FLVFGLTVYIMT-RPRPVYLVDYSCYRAPDHLK----APFARFMEHSRLTGDFDDSSLEF 136
Query: 122 YRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPS 181
R +L+ SG+GE+TY P + PS+A A E ++++F LD LFA T+++P
Sbjct: 137 QRKILER---SGLGEDTYVPE-AMHYIPPRPSMAAAREEAEQVMFGALDNLFANTNVNPK 192
Query: 182 EIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYK 241
+I +LVVN SLF+P PSL++ I+N+Y LR +I++FNL GMGCSA V+AVDL + + + ++
Sbjct: 193 DIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDMLQVHR 252
Query: 242 NKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRT 301
N A+VVSTE++ NWY G +KSM++ N LFR GG ++LL+N K ++ KL +VRT
Sbjct: 253 NTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYKLVHVVRT 312
Query: 302 HFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVI 361
H G++D+A+ C Q +D G G L+K L A A N+ L P +LP+ EQ +
Sbjct: 313 HRGADDKAFRCVYQEQDDAGKTGVSLSKDLMAIAGEALKTNITTLGPLVLPISEQLLFFA 372
Query: 362 QSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEP 421
+ K P+ K +HFC+H GGRAVID K L+L +E
Sbjct: 373 TLVVKKLFNKKMKPYIPD--------FKLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEA 424
Query: 422 ARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLEDP 481
+RM LHRFGNTS+ +WY L Y+EAK R++KG+R+ I+ G+GFKCN+ VWE ++ ++
Sbjct: 425 SRMTLHRFGNTSSSSIWYELAYIEAKGRMRKGNRVWQIAFGSGFKCNSAVWEALRHVKPS 484
Query: 482 N--VWKDCIDRYPPK 494
N W+DCID+YP K
Sbjct: 485 NNSPWEDCIDKYPVK 499
|
Length = 502 |
| >gnl|CDD|178520 PLN02932, PLN02932, 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Score = 340 bits (874), Expect = e-112
Identities = 175/451 (38%), Positives = 263/451 (58%), Gaps = 38/451 (8%)
Query: 57 IMALLYLLPLFYIIFHLYKWVLQKRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKK 116
+ L L ++ L R + Y++ + CY P + ++ V R ++
Sbjct: 46 LTMFFLYLALGSTLY------LMTRPKPVYLVDFSCYLPPSHLK-ASIQTIMGHVRRVRE 98
Query: 117 LGL--EEYRFLL----KNMVSSGIGEETYGPRNVVEGREESP---SLAEAFSEMDEIIFD 167
G +E +L+ K + SG+G+ETY P EG + P +LA + E +E+I
Sbjct: 99 AGAWKQESDYLMDFCEKILERSGLGQETYIP----EGLQCLPLQQNLAVSRKETEEVIIG 154
Query: 168 TLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASV 227
+D LF T ISPS+I +LVVN S F+P PSL+S ++N++ LR++IK+ NL GMGCSA V
Sbjct: 155 AVDNLFRNTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKSLNLGGMGCSAGV 214
Query: 228 VAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRAL 287
+A+D + L + ++N A+VVSTE++ N Y G KSM+++N LFR GG ++LL+N
Sbjct: 215 IAIDAAKSLLQVHRNTYALVVSTENITQNLYLGNNKSMLVTNCLFRIGGAAILLSNRSRD 274
Query: 288 KHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLV 347
+ +A +L VR H G++D +YEC Q ED+ G G L+K L AA +N+ L
Sbjct: 275 RKRAKYELVHTVRVHTGADDRSYECATQEEDEDGIVGVSLSKNLPMVAARTLKINIATLG 334
Query: 348 PKILPLREQF----RYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRA 403
P +LPL E+F R+V + ++ +++ + K EHFC+H GGRA
Sbjct: 335 PLVLPLSEKFHFFVRFVKKKFFNPKLKHYIP------------DFKLAFEHFCIHAGGRA 382
Query: 404 VIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGA 463
+ID K L L D+E +RM LHRFGNTS+ +WY L Y EAK R+KKGDRI I+LG+
Sbjct: 383 LIDEMEKNLHLTPLDVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMKKGDRIWQIALGS 442
Query: 464 GFKCNNCVWEVMKDLEDP--NVWKDCIDRYP 492
GFKCN+ VW +++++ N W+DC+ +YP
Sbjct: 443 GFKCNSSVWVALRNVKPSANNPWEDCLHKYP 473
|
Length = 478 |
| >gnl|CDD|177808 PLN00415, PLN00415, 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Score = 335 bits (861), Expect = e-110
Identities = 177/464 (38%), Positives = 268/464 (57%), Gaps = 19/464 (4%)
Query: 34 LEIFFFSFPPFSLCQLSYFFFSFIMALLYLLPLFYIIFHLYKWVLQKRGQCCYMLAYECY 93
L + S L + FFS + LL L I F+ Y R + Y++ + C+
Sbjct: 13 LILILLSLFELDLLHFHHDFFSPFPVKIGLL-LISIFFYAYS---TTRSKPVYLVDFSCH 68
Query: 94 KPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPS 153
+P D + + +E+ + + E +F+ + + SG+G++TY PR ++ +PS
Sbjct: 69 QPTDSCK-ISSETFFNMAKGAQLYTEETIQFMTRILNRSGLGDDTYSPRCMLTS-PPTPS 126
Query: 154 LAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDI 213
+ EA E + +IF L+ LF +T I P E+ + +VN SLF+P PSL+S I+NRY L+ D+
Sbjct: 127 MYEARHESELVIFGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDV 186
Query: 214 KAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFR 273
K +NLSGMGCSA ++VDL L + N A++VSTE+M + Y G ++SM++ N LFR
Sbjct: 187 KTYNLSGMGCSAGAISVDLATNLLKANPNTYAVIVSTENMTLSMYRGNDRSMLVPNCLFR 246
Query: 274 SGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTK 333
GG +++L+N + ++ +L +VRTH GS+D+ Y C Q ED +G G L+K+LT
Sbjct: 247 VGGAAVMLSNRSQDRVRSKYELTHIVRTHKGSSDKHYTCAEQKEDSKGIVGVALSKELTV 306
Query: 334 AAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIE 393
A NL L P +LPL E+ R+++ R S P+ K +
Sbjct: 307 VAGDTLKTNLTALGPLVLPLSEKLRFILFLVKSKLFRLKVSPYVPD--------FKLCFK 358
Query: 394 HFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKG 453
HFC+H GGRA++D KGL L E+DLEP+RM LHRFGNTS+ LWY L Y+EAK R+K+G
Sbjct: 359 HFCIHAGGRALLDAVEKGLGLSEFDLEPSRMTLHRFGNTSSSSLWYELAYVEAKCRVKRG 418
Query: 454 DRILMISLGAGFKCNNCVWEVMKDLEDP-----NVWKDCIDRYP 492
DR+ ++ G+GFKCN+ VW ++ + N W D + +YP
Sbjct: 419 DRVWQLAFGSGFKCNSIVWRALRTIPANESLVGNPWGDSVHKYP 462
|
Length = 466 |
| >gnl|CDD|215123 PLN02192, PLN02192, 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Score = 336 bits (862), Expect = e-110
Identities = 169/443 (38%), Positives = 263/443 (59%), Gaps = 33/443 (7%)
Query: 58 MALLYLLPLFYIIFHLYKWVLQKRGQCCYMLAYECYKPCDETRRLDTESCARVVW--RNK 115
L++L L+++ R + Y++ + CYKP D++R+ C R ++ R+K
Sbjct: 85 TLLVFLSTLYFL----------TRPRPVYLVDFSCYKP-DDSRK-----CTRKIFMDRSK 128
Query: 116 KLGL---EEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDEIIFDTLDKL 172
G E F K + SG+GE TY P V+ +P +AEA E + ++F +D+L
Sbjct: 129 LTGSFTEENLEFQRKILERSGLGESTYLPEAVLN-VPPNPCMAEARKEAETVMFGAIDQL 187
Query: 173 FARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDL 232
A+T + P +I +L+VN SLF+P PSL++ +IN Y LR +I ++NL GMGCSA ++++DL
Sbjct: 188 LAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDL 247
Query: 233 VQQLFRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAI 292
+ L + + N A+V+S E++ NWY G ++SM++SN LFR GG ++LL+N R+ + ++
Sbjct: 248 AKHLLQVHPNSYALVISMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNKRSDRRRSK 307
Query: 293 LKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILP 352
+L VRTH G++D+ + C Q ED G G L+K L A A N+ L P +LP
Sbjct: 308 YQLVHTVRTHKGADDKCFACVTQEEDSAGKIGVSLSKDLMAVAGDALKTNITTLGPLVLP 367
Query: 353 LREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGL 412
+ EQ ++ + K K + + + K EHFC+H GGRAV+D K L
Sbjct: 368 MSEQLL-----FFATLVGKKLFKMKLKPYIP---DFKLAFEHFCIHAGGRAVLDELEKNL 419
Query: 413 ELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVW 472
+L ++ +EP+RM L+RFGNTS+ LWY L Y EAK R+KKGDR I+ G+GFKCN+ VW
Sbjct: 420 QLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVW 479
Query: 473 EVMKDL---EDPNVWKDCIDRYP 492
+ ++ + ++ N W D I +P
Sbjct: 480 KALRTVNPAKEKNPWMDEIHEFP 502
|
Length = 511 |
| >gnl|CDD|238427 cd00831, CHS_like, Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs | Back alignment and domain information |
|---|
Score = 312 bits (802), Expect = e-103
Identities = 117/389 (30%), Positives = 174/389 (44%), Gaps = 47/389 (12%)
Query: 85 CYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNV 144
++ + + E ++ K G+E +L GEETY PR
Sbjct: 19 SELVDFYRRLFSSD---HLPELKEKLKRLCAKTGIETRYLVLP------GGEETYAPRPE 69
Query: 145 VEGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRII 204
A E E+ + + PS+ID LVVN S +P PSL + +I
Sbjct: 70 -MSPSLDERNDIALEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLI 128
Query: 205 NRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGRE-K 263
NR LR D+K +NL GMGCSA +A+DL + L +VVSTE WY G + +
Sbjct: 129 NRLGLRPDVKRYNLGGMGCSAGAIALDLAKDLLEANPGARVLVVSTELCSL-WYRGPDHR 187
Query: 264 SMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHP 323
SM++ N LF G ++LL+N+ + + A + +
Sbjct: 188 SMLVGNALFGDGAAAVLLSNDPRDRRR---------ERPLFELVRAASTLLPDSE--DAM 236
Query: 324 GFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLG 383
G+ L ++ T L VP+++ E+ ++ + +
Sbjct: 237 GWHLGEE-------GLTFVLSRDVPRLV---EKN---LERVLRKLLARLGIG-------- 275
Query: 384 AGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGY 443
K +H+C+HPGGRAV+D K L L DLE +RM L R+GN S+ + YVL Y
Sbjct: 276 ---LFKLAFDHWCVHPGGRAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAY 332
Query: 444 MEAKKRLKKGDRILMISLGAGFKCNNCVW 472
MEAK R+K+GDR L+I+ G GF C + VW
Sbjct: 333 MEAKGRVKRGDRGLLIAFGPGFTCESAVW 361
|
PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions. Length = 361 |
| >gnl|CDD|223409 COG0332, FabH, 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Score = 83.4 bits (207), Expect = 1e-17
Identities = 64/307 (20%), Positives = 113/307 (36%), Gaps = 51/307 (16%)
Query: 170 DKLFARTDISPSEIDVLVVN-VSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVV 228
K ISP +ID+++V + PS + R L AF+L CS +
Sbjct: 61 RKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLGG-APAFDLQ-AACSGFLY 118
Query: 229 AVDLVQQLFRTYKNKLAIVVSTESMGP--NWYCGREKSMMLSNILFRSGGCSMLLTNNRA 286
A+ + L R+ K +VV E++ +W + + +LF G +++L
Sbjct: 119 ALSVADGLIRSGGYKNVLVVGAETLSRILDW------TDRDTCVLFGDGAGAVVLEATED 172
Query: 287 LKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVL 346
++ T GS+ + PG ++ M+
Sbjct: 173 DNG--------ILDTDLGSDGSQGDLLYL-------PGGGSATPKEESGGGLLVMDG--- 214
Query: 347 VPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVL-GAGLNLKAGIEHFCLHPGGRAVI 405
RE F++ +++ + E VL AGL I+ F H +I
Sbjct: 215 -------REVFKFAVRAMPKA----------IEEVLEKAGL-TPEDIDWFVPHQANLRII 256
Query: 406 DGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGF 465
+ K L + E E + + ++GNTSA + L + R+K GD +L+ + G G
Sbjct: 257 EAIAKKLGIPE---EKVVVTVDKYGNTSAASIPLALDEALREGRIKPGDLVLLEAFGGGL 313
Query: 466 KCNNCVW 472
+
Sbjct: 314 TWGAALV 320
|
Length = 323 |
| >gnl|CDD|238426 cd00830, KAS_III, Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Score = 81.8 bits (203), Expect = 5e-17
Identities = 70/340 (20%), Positives = 124/340 (36%), Gaps = 68/340 (20%)
Query: 132 SGIGEETYGPRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEID-VLVVNV 190
+GI E R + + E + LA ++ K I +ID ++V
Sbjct: 36 TGIRE-----RRIADPGETTSDLAVEAAK----------KALEDAGIDADDIDLIIVATS 80
Query: 191 SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVST 250
+ P+ + R +N AF+++ CS + + L R+ K +VV
Sbjct: 81 TPDYLFPATACLVQARLGAKN-AAAFDINA-ACSGFLYGLSTAAGLIRSGGAKNVLVVGA 138
Query: 251 ESMGP--NWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDE 308
E++ +W + + +LF G +++L + IL + GS+
Sbjct: 139 ETLSRILDW------TDRSTAVLFGDGAGAVVLE--ATEEDPGILD------SVLGSDGS 184
Query: 309 AYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENR 368
+ G R + + M+ RE F++ ++
Sbjct: 185 GADLL-----TIPAGGSRSPFEDAEGGDPYLVMDG----------REVFKFAVR-----L 224
Query: 369 IRKSTSSTKPEAVLG-AGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMA-- 425
+ +S E L AGL I+ F H +I+ K L L ++
Sbjct: 225 MPESI-----EEALEKAGLT-PDDIDWFVPHQANLRIIEAVAKRLGLP-----EEKVVVN 273
Query: 426 LHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGF 465
L R+GNTSA + L + +LKKGD +L++ GAG
Sbjct: 274 LDRYGNTSAASIPLALDEAIEEGKLKKGDLVLLLGFGAGL 313
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. Length = 320 |
| >gnl|CDD|238423 cd00827, init_cond_enzymes, "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes | Back alignment and domain information |
|---|
Score = 65.9 bits (161), Expect = 8e-12
Identities = 67/350 (19%), Positives = 113/350 (32%), Gaps = 56/350 (16%)
Query: 119 LEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTDI 178
L E + ++GIG+ R++ E+ P++A + + R I
Sbjct: 21 LAEGLGVDPGKYTTGIGQ-----RHMAGDDEDVPTMAV----------EAARRALERAGI 65
Query: 179 SPSEID-VLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLF 237
P +I ++V S S + + + +AF+L C A+ L L
Sbjct: 66 DPDDIGLLIVATESPIDKGKSAAT-YLAELLGLTNAEAFDLKQ-ACYGGTAALQLAANLV 123
Query: 238 RTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNC 297
+ + A+VV+++ G L G +ML++ N +
Sbjct: 124 ESGPWRYALVVASDIASYLLDEGSALEPTLG-----DGAAAMLVSRN---PGILAAGIVS 175
Query: 298 LVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQF 357
T D + M K A A+ T P
Sbjct: 176 THSTSDPGYDFSPYPVM---------DGGYPKPCKLAYAIRLTAE---------PAGRAV 217
Query: 358 RYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLH-PGGRAVIDGTGKGLELDE 416
+RK+ L I++F H P G+ +++ K L
Sbjct: 218 FEAAHKLIAKVVRKA----------LDRAGLSEDIDYFVPHQPNGKKILEAVAKKLGGPP 267
Query: 417 YDLEPARM-ALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGF 465
R L R GN A + L + +LK GDR+L+ S G+GF
Sbjct: 268 EKASQTRWILLRRVGNMYAASILLGLASLLESGKLKAGDRVLLFSYGSGF 317
|
They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues. Length = 324 |
| >gnl|CDD|117118 pfam08541, ACP_syn_III_C, 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal | Back alignment and domain information |
|---|
Score = 59.0 bits (144), Expect = 4e-11
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 384 AGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGY 443
AGL I+ F H +ID K L L E + L R+GNTSA + L
Sbjct: 4 AGLTPDD-IDWFVPHQANLRIIDAVAKRLGLPP---EKVVVNLDRYGNTSAASIPLALDE 59
Query: 444 MEAKKRLKKGDRILMISLGAGF 465
+ +LK GD +L++ GAG
Sbjct: 60 AVEEGKLKPGDLVLLVGFGAGL 81
|
This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EC:2.3.1.41, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. Length = 90 |
| >gnl|CDD|225958 COG3424, BcsA, Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 60.1 bits (146), Expect = 9e-10
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 392 IEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLK 451
IE + +HPGG VID + L L LE + L +GN S+ + +VL +K K
Sbjct: 271 IEAWVVHPGGPKVIDAYEESLGLSPEALELSWDVLREYGNMSSATVLFVLEDT-LQKAPK 329
Query: 452 KGDRILMISLGAGF 465
G R LM ++G GF
Sbjct: 330 SGSRGLMFAMGPGF 343
|
Length = 356 |
| >gnl|CDD|233113 TIGR00747, fabH, 3-oxoacyl-(acyl-carrier-protein) synthase III | Back alignment and domain information |
|---|
Score = 53.2 bits (128), Expect = 1e-07
Identities = 64/298 (21%), Positives = 109/298 (36%), Gaps = 66/298 (22%)
Query: 178 ISPSEID-VLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQL 236
IS +ID ++V + PS + ++ I AF+LS C+ + A+ + +Q
Sbjct: 68 ISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIKG-IPAFDLSA-ACAGFIYALSVAKQY 125
Query: 237 FRTYKNKLAIVVSTESMGP--NWY----CGREKSMMLSNILFRSGGCSMLLTNNRALKHK 290
+ K K +VV E + +W C +LF G +++L +
Sbjct: 126 IESGKYKTVLVVGAEKLSSTLDWTDRGTC----------VLFGDGAGAVVLGESEDPGG- 174
Query: 291 AILKLNCLVRTHFGSNDEAYECCMQVED---QQGHPGFRLTKQLTKAAALAFTMNLQVLV 347
++ TH G++ E G F TM
Sbjct: 175 -------IISTHLGADGTQGEALYLPAGGRPTSGPSPF-------------ITMEGN--- 211
Query: 348 PKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDG 407
E F++ + RK + E + GL+ I+ F H +I+
Sbjct: 212 -------EVFKHAV--------RKMGDVVE-ETLEANGLD-PEDIDWFVPHQANLRIIEA 254
Query: 408 TGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGF 465
K LELD +H++GNTSA + L + R+K GD +L+++ G G
Sbjct: 255 LAKRLELDM---SQVVKTVHKYGNTSAASIPLALDELLRTGRIKPGDLLLLVAFGGGL 309
|
FabH in general initiate elongation in type II fatty acid synthase systems found in bacteria and plants. The two members of this subfamily from Bacillus subtilis differ from each other, and from FabH from E. coli, in acyl group specificity. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 318 |
| >gnl|CDD|225958 COG3424, BcsA, Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 52.4 bits (126), Expect = 2e-07
Identities = 28/158 (17%), Positives = 56/158 (35%), Gaps = 10/158 (6%)
Query: 99 TRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEA- 157
R +E + E + + + ++ + + + E E
Sbjct: 14 YRYNQSEITDSFA---ELPFQEGREDIPRVLHANAQINRRHLVLPL-DWYREPHGFGEKN 69
Query: 158 ---FSEMDEIIFDTLDKLFARTDISPSEIDVLV-VNVSLFSPAPSLTSRIINRYNLRNDI 213
E + D L + + + P +ID +V V + + PSL +RI+ L D
Sbjct: 70 EIFIEEAVPLGVDALRRALDGSPLRPEDIDAVVTVTSTGLA-TPSLDARIVGELGLSPDT 128
Query: 214 KAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTE 251
+ + G+GC+A + + R + +VV E
Sbjct: 129 RRVPVWGLGCAAGAAGLARARDYCRAAPDANVLVVCVE 166
|
Length = 356 |
| >gnl|CDD|111670 pfam02797, Chal_sti_synt_C, Chalcone and stilbene synthases, C-terminal domain | Back alignment and domain information |
|---|
Score = 48.4 bits (116), Expect = 8e-07
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 397 LHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKG 453
HPGG A++D L L L +R L +GN S+ + ++L M KK LKKG
Sbjct: 65 AHPGGPAILDQVEAKLGLKPEKLRASRHVLSEYGNMSSACVLFILDEMR-KKSLKKG 120
|
This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. Length = 151 |
| >gnl|CDD|236475 PRK09352, PRK09352, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Score = 50.1 bits (121), Expect = 1e-06
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 7/63 (11%)
Query: 405 IDGTGKGLELDEYDLEPARMA--LHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLG 462
ID T K L L ++ + ++GNTSA + L R+K+GD +L+ G
Sbjct: 252 IDATAKKLGLPM-----EKVVVTVDKYGNTSAASIPLALDEAVRDGRIKRGDLVLLEGFG 306
Query: 463 AGF 465
G
Sbjct: 307 GGL 309
|
Length = 319 |
| >gnl|CDD|215612 PLN03169, PLN03169, chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Score = 50.5 bits (121), Expect = 1e-06
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 398 HPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYM-EAKKRLKKGD 454
HPGG A+++ K L+L LE +R AL +GN S+ + YVL YM E K+ + D
Sbjct: 309 HPGGPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYMREELKKKGEED 366
|
Length = 391 |
| >gnl|CDD|180328 PRK05963, PRK05963, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 48.2 bits (115), Expect = 5e-06
Identities = 25/125 (20%), Positives = 53/125 (42%), Gaps = 12/125 (9%)
Query: 355 EQFRYVIQ---SYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKG 411
+F +Q + + +R + +++ + A + I+ F H ++D +
Sbjct: 209 SEFLMTMQDGRAVFTEAVRMMSGASQ-NVLASAAMTP-QDIDRFFPHQANARIVDKVCET 266
Query: 412 LELDEYDLEPARMA--LHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNN 469
+ + A+ A L +GN+SA + L ++ L++G+R+L + GAG
Sbjct: 267 I-----GIPRAKAASTLETYGNSSAATIPLSLSLANLEQPLREGERLLFAAAGAGMTGGA 321
Query: 470 CVWEV 474
V V
Sbjct: 322 VVMRV 326
|
Length = 326 |
| >gnl|CDD|237245 PRK12879, PRK12879, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Score = 44.1 bits (105), Expect = 9e-05
Identities = 60/308 (19%), Positives = 107/308 (34%), Gaps = 68/308 (22%)
Query: 171 KLFARTDISPSEIDVLVVN-VSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVA 229
+ AR + +ID+++V + PS S++ R + N AF+++ C+ +
Sbjct: 63 RALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIPN-AAAFDINA-ACAGFLYG 120
Query: 230 VDLVQQLFRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKH 289
++ L + K +V+ G E+ LS + +R
Sbjct: 121 LETANGLITSGLYKKVLVI-----------GAER---LS---------KVTDYTDRTT-- 155
Query: 290 KAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKA--------AALAFTM 341
IL FG D A + +E + PGF T L TM
Sbjct: 156 -CIL---------FG--DGA--GAVVLEATENEPGFIDYVLGTDGDGGDILYRTGLGTTM 201
Query: 342 NLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLG----AGLNLKAGIEHFCL 397
+ L + ++ +R T P+ AGL I+
Sbjct: 202 D-----RDALSGDGYIVQNGREVFKWAVR-----TMPKGARQVLEKAGLTKDD-IDWVIP 250
Query: 398 HPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRIL 457
H +I+ + L + E +++ +GNTSA + L + ++K GD +L
Sbjct: 251 HQANLRIIESLCEKLGIPM---EKTLVSVEYYGNTSAATIPLALDLALEQGKIKPGDTLL 307
Query: 458 MISLGAGF 465
+ GAG
Sbjct: 308 LYGFGAGL 315
|
Length = 325 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 517 | |||
| PLN02854 | 521 | 3-ketoacyl-CoA synthase | 100.0 | |
| PLN02192 | 511 | 3-ketoacyl-CoA synthase | 100.0 | |
| PLN02932 | 478 | 3-ketoacyl-CoA synthase | 100.0 | |
| PLN02377 | 502 | 3-ketoacyl-CoA synthase | 100.0 | |
| PLN00415 | 466 | 3-ketoacyl-CoA synthase | 100.0 | |
| PF08392 | 290 | FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- | 100.0 | |
| COG0332 | 323 | FabH 3-oxoacyl-[acyl-carrier-protein] | 100.0 | |
| cd00831 | 361 | CHS_like Chalcone and stilbene synthases; plant-sp | 100.0 | |
| PLN03172 | 393 | chalcone synthase family protein; Provisional | 100.0 | |
| PRK12880 | 353 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 100.0 | |
| PLN03169 | 391 | chalcone synthase family protein; Provisional | 100.0 | |
| PRK05963 | 326 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PLN03168 | 389 | chalcone synthase; Provisional | 100.0 | |
| PLN03173 | 391 | chalcone synthase; Provisional | 100.0 | |
| PLN02326 | 379 | 3-oxoacyl-[acyl-carrier-protein] synthase III | 100.0 | |
| PLN03170 | 401 | chalcone synthase; Provisional | 100.0 | |
| PLN03171 | 399 | chalcone synthase-like protein; Provisional | 100.0 | |
| CHL00203 | 326 | fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr | 100.0 | |
| PRK07204 | 329 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 100.0 | |
| PRK12879 | 325 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 100.0 | |
| COG3424 | 356 | BcsA Predicted naringenin-chalcone synthase [Secon | 100.0 | |
| PRK09258 | 338 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 100.0 | |
| PRK06840 | 339 | hypothetical protein; Validated | 100.0 | |
| TIGR00747 | 318 | fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | 100.0 | |
| cd00830 | 320 | KAS_III Ketoacyl-acyl carrier protein synthase III | 100.0 | |
| PRK09352 | 319 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 100.0 | |
| PRK06816 | 378 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 100.0 | |
| PRK04262 | 347 | hypothetical protein; Provisional | 100.0 | |
| TIGR00748 | 345 | HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase | 100.0 | |
| PRK07515 | 372 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 100.0 | |
| cd00827 | 324 | init_cond_enzymes "initiating" condensing enzymes | 100.0 | |
| TIGR01835 | 379 | HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt | 100.0 | |
| PLN02577 | 459 | hydroxymethylglutaryl-CoA synthase | 100.0 | |
| COG3425 | 377 | PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi | 100.0 | |
| TIGR01833 | 454 | HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth | 100.0 | |
| PF00195 | 226 | Chal_sti_synt_N: Chalcone and stilbene synthases, | 99.97 | |
| cd00327 | 254 | cond_enzymes Condensing enzymes; Family of enzymes | 99.96 | |
| cd00825 | 332 | decarbox_cond_enzymes decarboxylating condensing e | 99.94 | |
| PF08541 | 90 | ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC | 99.83 | |
| PF01154 | 174 | HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s | 99.79 | |
| PF02797 | 151 | Chal_sti_synt_C: Chalcone and stilbene synthases, | 99.77 | |
| KOG1393 | 462 | consensus Hydroxymethylglutaryl-CoA synthase [Lipi | 99.77 | |
| PRK06147 | 348 | 3-oxoacyl-(acyl carrier protein) synthase; Validat | 99.77 | |
| TIGR02845 | 327 | spore_V_AD stage V sporulation protein AD. Bacillu | 99.73 | |
| cd00834 | 406 | KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) | 99.64 | |
| PRK08304 | 337 | stage V sporulation protein AD; Validated | 99.61 | |
| cd00751 | 386 | thiolase Thiolase are ubiquitous enzymes that cata | 99.59 | |
| smart00825 | 424 | PKS_KS Beta-ketoacyl synthase. The structure of be | 99.56 | |
| TIGR01930 | 386 | AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi | 99.54 | |
| PRK09051 | 394 | beta-ketothiolase; Provisional | 99.53 | |
| PRK05656 | 393 | acetyl-CoA acetyltransferase; Provisional | 99.53 | |
| cd00828 | 407 | elong_cond_enzymes "elongating" condensing enzymes | 99.49 | |
| PRK06064 | 389 | acetyl-CoA acetyltransferase; Provisional | 99.49 | |
| PRK09052 | 399 | acetyl-CoA acetyltransferase; Provisional | 99.49 | |
| PRK06501 | 425 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.48 | |
| cd00829 | 375 | SCP-x_thiolase Thiolase domain associated with ste | 99.48 | |
| TIGR03150 | 407 | fabF beta-ketoacyl-acyl-carrier-protein synthase I | 99.46 | |
| cd00833 | 421 | PKS polyketide synthases (PKSs) polymerize simple | 99.46 | |
| PRK07108 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.45 | |
| PRK08313 | 386 | acetyl-CoA acetyltransferase; Provisional | 99.45 | |
| PF08545 | 80 | ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP) | 99.44 | |
| PRK07314 | 411 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.42 | |
| PRK06205 | 404 | acetyl-CoA acetyltransferase; Provisional | 99.42 | |
| PRK08242 | 402 | acetyl-CoA acetyltransferase; Validated | 99.41 | |
| PRK12578 | 385 | acetyl-CoA acetyltransferase; Provisional | 99.41 | |
| PRK05790 | 393 | putative acyltransferase; Provisional | 99.41 | |
| PRK08235 | 393 | acetyl-CoA acetyltransferase; Provisional | 99.4 | |
| PRK07103 | 410 | polyketide beta-ketoacyl:acyl carrier protein synt | 99.39 | |
| PRK06954 | 397 | acetyl-CoA acetyltransferase; Provisional | 99.39 | |
| PRK06059 | 399 | lipid-transfer protein; Provisional | 99.38 | |
| PRK06445 | 394 | acetyl-CoA acetyltransferase; Provisional | 99.35 | |
| PRK07661 | 391 | acetyl-CoA acetyltransferase; Provisional | 99.34 | |
| PRK06333 | 424 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.33 | |
| PRK08722 | 414 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.31 | |
| PRK06065 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.3 | |
| PRK06158 | 384 | thiolase; Provisional | 99.28 | |
| PRK12404 | 334 | stage V sporulation protein AD; Provisional | 99.28 | |
| PLN02287 | 452 | 3-ketoacyl-CoA thiolase | 99.27 | |
| PRK05952 | 381 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.26 | |
| PRK07851 | 406 | acetyl-CoA acetyltransferase; Provisional | 99.25 | |
| PRK06690 | 361 | acetyl-CoA acetyltransferase; Provisional | 99.25 | |
| PRK08256 | 391 | lipid-transfer protein; Provisional | 99.23 | |
| PRK06025 | 417 | acetyl-CoA acetyltransferase; Provisional | 99.23 | |
| PLN02644 | 394 | acetyl-CoA C-acetyltransferase | 99.23 | |
| PRK07516 | 389 | acetyl-CoA acetyltransferase; Provisional | 99.23 | |
| cd00832 | 399 | CLF Chain-length factor (CLF) is a factor required | 99.22 | |
| PRK06633 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.22 | |
| PRK09116 | 405 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.22 | |
| PRK08439 | 406 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.22 | |
| PLN02787 | 540 | 3-oxoacyl-[acyl-carrier-protein] synthase II | 99.21 | |
| PRK09185 | 392 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 99.21 | |
| PLN02836 | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase | 99.21 | |
| PRK06289 | 403 | acetyl-CoA acetyltransferase; Provisional | 99.21 | |
| PRK07850 | 387 | acetyl-CoA acetyltransferase; Provisional | 99.2 | |
| PRK06519 | 398 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.17 | |
| PRK13359 | 400 | beta-ketoadipyl CoA thiolase; Provisional | 99.16 | |
| PRK09050 | 401 | beta-ketoadipyl CoA thiolase; Validated | 99.16 | |
| PTZ00050 | 421 | 3-oxoacyl-acyl carrier protein synthase; Provision | 99.15 | |
| PRK08963 | 428 | fadI 3-ketoacyl-CoA thiolase; Reviewed | 99.14 | |
| TIGR02430 | 400 | pcaF beta-ketoadipyl CoA thiolase. Members of this | 99.14 | |
| PRK06504 | 390 | acetyl-CoA acetyltransferase; Provisional | 99.12 | |
| PRK07910 | 418 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.11 | |
| PRK07801 | 382 | acetyl-CoA acetyltransferase; Provisional | 99.11 | |
| PRK08131 | 401 | acetyl-CoA acetyltransferase; Provisional | 99.11 | |
| PRK08947 | 387 | fadA 3-ketoacyl-CoA thiolase; Reviewed | 99.11 | |
| PRK07967 | 406 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 99.05 | |
| TIGR02445 | 385 | fadA fatty oxidation complex, beta subunit FadA. T | 99.05 | |
| TIGR02446 | 430 | FadI fatty oxidation complex, beta subunit FadI. T | 99.03 | |
| PRK08257 | 498 | acetyl-CoA acetyltransferase; Validated | 99.01 | |
| PRK14691 | 342 | 3-oxoacyl-(acyl carrier protein) synthase II; Prov | 98.99 | |
| PRK08170 | 426 | acetyl-CoA acetyltransferase; Provisional | 98.94 | |
| cd00826 | 393 | nondecarbox_cond_enzymes nondecarboxylating conden | 98.89 | |
| PF00108 | 264 | Thiolase_N: Thiolase, N-terminal domain; InterPro: | 98.84 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 98.84 | |
| PRK08142 | 388 | acetyl-CoA acetyltransferase; Provisional | 98.84 | |
| PF00109 | 254 | ketoacyl-synt: Beta-ketoacyl synthase, N-terminal | 98.72 | |
| PF07451 | 329 | SpoVAD: Stage V sporulation protein AD (SpoVAD); I | 98.68 | |
| PRK06066 | 385 | acetyl-CoA acetyltransferase; Provisional | 98.66 | |
| PRK06366 | 388 | acetyl-CoA acetyltransferase; Provisional | 98.63 | |
| PRK06157 | 398 | acetyl-CoA acetyltransferase; Validated | 98.56 | |
| PTZ00455 | 438 | 3-ketoacyl-CoA thiolase; Provisional | 98.53 | |
| PRK06365 | 430 | acetyl-CoA acetyltransferase; Provisional | 98.49 | |
| PRK07937 | 352 | lipid-transfer protein; Provisional | 98.43 | |
| COG0304 | 412 | FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li | 98.39 | |
| PRK09268 | 427 | acetyl-CoA acetyltransferase; Provisional | 98.35 | |
| COG3321 | 1061 | Polyketide synthase modules and related proteins [ | 98.21 | |
| PRK07855 | 386 | lipid-transfer protein; Provisional | 98.06 | |
| KOG1389 | 435 | consensus 3-oxoacyl CoA thiolase [Lipid transport | 97.92 | |
| COG0183 | 392 | PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis | 97.57 | |
| KOG1394 | 440 | consensus 3-oxoacyl-(acyl-carrier-protein) synthas | 97.52 | |
| PF08540 | 282 | HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A s | 97.28 | |
| KOG1406 | 408 | consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44 | 97.26 | |
| KOG1390 | 396 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 97.24 | |
| KOG1391 | 396 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 95.45 | |
| PF08541 | 90 | ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC | 94.61 | |
| TIGR00748 | 345 | HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase | 94.1 | |
| PRK06816 | 378 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 93.38 | |
| PRK09258 | 338 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 93.25 | |
| PF13723 | 218 | Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina | 93.2 | |
| PRK06025 | 417 | acetyl-CoA acetyltransferase; Provisional | 93.03 | |
| PRK05963 | 326 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 92.72 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 92.67 | |
| PRK06366 | 388 | acetyl-CoA acetyltransferase; Provisional | 92.49 | |
| PRK07204 | 329 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 92.25 | |
| TIGR00747 | 318 | fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | 91.44 | |
| PRK04262 | 347 | hypothetical protein; Provisional | 91.16 | |
| PLN02326 | 379 | 3-oxoacyl-[acyl-carrier-protein] synthase III | 91.16 | |
| PRK06840 | 339 | hypothetical protein; Validated | 90.93 | |
| KOG1392 | 465 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 90.84 | |
| cd00825 | 332 | decarbox_cond_enzymes decarboxylating condensing e | 90.62 | |
| PF02803 | 123 | Thiolase_C: Thiolase, C-terminal domain; InterPro: | 90.58 | |
| PRK09352 | 319 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 90.23 | |
| PRK12879 | 325 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 90.04 | |
| PRK08242 | 402 | acetyl-CoA acetyltransferase; Validated | 89.53 | |
| cd00830 | 320 | KAS_III Ketoacyl-acyl carrier protein synthase III | 89.35 | |
| PRK09050 | 401 | beta-ketoadipyl CoA thiolase; Validated | 89.07 | |
| CHL00203 | 326 | fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr | 88.9 | |
| COG3425 | 377 | PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi | 88.54 | |
| cd00327 | 254 | cond_enzymes Condensing enzymes; Family of enzymes | 88.34 | |
| PTZ00455 | 438 | 3-ketoacyl-CoA thiolase; Provisional | 88.26 | |
| PRK13359 | 400 | beta-ketoadipyl CoA thiolase; Provisional | 88.06 | |
| PRK07515 | 372 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 87.83 | |
| PRK08170 | 426 | acetyl-CoA acetyltransferase; Provisional | 87.24 | |
| PF00195 | 226 | Chal_sti_synt_N: Chalcone and stilbene synthases, | 86.48 | |
| PRK09052 | 399 | acetyl-CoA acetyltransferase; Provisional | 86.36 | |
| PRK07850 | 387 | acetyl-CoA acetyltransferase; Provisional | 86.0 | |
| TIGR02430 | 400 | pcaF beta-ketoadipyl CoA thiolase. Members of this | 85.99 | |
| PF02803 | 123 | Thiolase_C: Thiolase, C-terminal domain; InterPro: | 85.68 | |
| PRK06205 | 404 | acetyl-CoA acetyltransferase; Provisional | 85.15 | |
| cd00826 | 393 | nondecarbox_cond_enzymes nondecarboxylating conden | 85.06 | |
| PRK06954 | 397 | acetyl-CoA acetyltransferase; Provisional | 84.71 | |
| PRK07855 | 386 | lipid-transfer protein; Provisional | 84.37 | |
| PRK09051 | 394 | beta-ketothiolase; Provisional | 84.25 | |
| PRK06690 | 361 | acetyl-CoA acetyltransferase; Provisional | 84.07 | |
| PRK06147 | 348 | 3-oxoacyl-(acyl carrier protein) synthase; Validat | 84.06 | |
| PRK08257 | 498 | acetyl-CoA acetyltransferase; Validated | 84.0 | |
| cd00831 | 361 | CHS_like Chalcone and stilbene synthases; plant-sp | 83.9 | |
| PRK05656 | 393 | acetyl-CoA acetyltransferase; Provisional | 83.86 | |
| PRK07851 | 406 | acetyl-CoA acetyltransferase; Provisional | 83.5 | |
| PLN02287 | 452 | 3-ketoacyl-CoA thiolase | 82.76 | |
| PRK07661 | 391 | acetyl-CoA acetyltransferase; Provisional | 82.57 | |
| PRK06445 | 394 | acetyl-CoA acetyltransferase; Provisional | 82.37 | |
| PRK06365 | 430 | acetyl-CoA acetyltransferase; Provisional | 82.06 | |
| TIGR01835 | 379 | HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt | 82.04 | |
| PRK12880 | 353 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 82.02 | |
| COG0332 | 323 | FabH 3-oxoacyl-[acyl-carrier-protein] | 81.08 | |
| PLN03169 | 391 | chalcone synthase family protein; Provisional | 80.5 | |
| PRK08235 | 393 | acetyl-CoA acetyltransferase; Provisional | 80.06 |
| >PLN02854 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-92 Score=756.84 Aligned_cols=430 Identities=39% Similarity=0.733 Sum_probs=403.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhHhhhhcCCCceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHH
Q 010144 50 SYFFFSFIMALLYLLPLFYIIFHLYKWVLQKRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNM 129 (517)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~ 129 (517)
+++.+++++.++++++|++++|+| +||++||+++++||+|++ +++++.+.++++....+.|++++++||+|++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~vylvd~~c~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 157 (521)
T PLN02854 85 LHLDTATRLTGSAFLLFLLGLYWA------KRSKPVYLVDFACYKPED-ERKISVDSFLTMTEENGSFEDETVQFQRRIS 157 (521)
T ss_pred hHHhHHHHHHHHHHHHHHHHHHHH------cCCCcEEEEeeeeecCCc-cccccHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 667789999999999999999999 999999999999999999 9999999999999999999999999999999
Q ss_pred HHhCCceeEeccCCCcCCCCCCccHHHhHhhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCC
Q 010144 130 VSSGIGEETYGPRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNL 209 (517)
Q Consensus 130 ~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl 209 (517)
++||+++++|+|+.+++.|++ .+|+++|+|++++++.|+++||+++|++|+|||+||++||+++++|++|++|+++||+
T Consensus 158 ~~sg~g~~ty~P~~~~~~~~~-~~~~~~r~ea~~v~~~~~~~lL~kaGi~p~dID~LIv~cS~~~p~PSlAa~I~n~LGl 236 (521)
T PLN02854 158 TRSGLGDETYLPRGITSRPPN-LCMEEARAEAEAVMFGALDSLFSKTGVKPRDIGILIVNCSLFNPTPSLSAMIVNHYKL 236 (521)
T ss_pred HhcCCCCccccCccccCCCCc-chHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCC
Confidence 999999999999999988875 5999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccc
Q 010144 210 RNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKH 289 (517)
Q Consensus 210 ~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~ 289 (517)
++++.+|||+||||+||++||++|+++++++++++||||++|.+|.+||.++||++++++++|||||||+||++++.+++
T Consensus 237 r~~i~afdLsgmGCSggl~aL~lA~~lL~~~~~~~aLVVstE~~S~~~y~g~Drs~lv~~~LFgDGAAAvlLs~~~~~~~ 316 (521)
T PLN02854 237 RTDIKSYNLGGMGCSAGLISIDLANDLLKANPNSYAVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAVLLSNKARDRK 316 (521)
T ss_pred CCCceEEecccchhhhHHHHHHHHHHHHHhCCCCeEEEEEEeeeecCCCCCCchhhhcceeeeccceeEEEEeccccccc
Confidence 98999999999999999999999999999999999999999999999999999999999999999999999998764445
Q ss_pred cchhhccceeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHH
Q 010144 290 KAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRI 369 (517)
Q Consensus 290 ~~~~~l~~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~ 369 (517)
+++|+|.+++++++++|++.++++++++|+.|..|+++++++|.+++++++.+++++||.++|+.++++|+...+.+++.
T Consensus 317 ~~k~~L~~~v~t~~~ad~~~~~~i~~~~d~~G~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i~~~L~ 396 (521)
T PLN02854 317 RSKYQLVHTVRTHKGADDKNYNCVYQREDDKGTIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVTLVRRKLL 396 (521)
T ss_pred ccchheeeEEEEEEeeCCCccCeEEeccCCCCcccccccccccchhhhhhhhhhhhccccccchHHHHHHHHHHHHHHHH
Confidence 67899999999999999999999999988778778889999998888889999999999999999999998887666654
Q ss_pred HhhcCCCchhhhhCCCCCcccccceeecCCCChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCC
Q 010144 370 RKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKR 449 (517)
Q Consensus 370 ~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~ 449 (517)
+.. ...+.|||++||||||+||+|++++++++++||++++++++|++++++||||||||+|++|++++++|+
T Consensus 397 ~~g--------l~~~~pd~~~didhf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSASI~~~L~~~~~kGr 468 (521)
T PLN02854 397 KAK--------VKPYIPDFKLAFEHFCIHAGGRAVLDELQKNLQLSDWHMEPSRMTLHRFGNTSSSSLWYELAYTEAKGR 468 (521)
T ss_pred HcC--------CCccCCcccccCcEEEECCCCHHHHHHHHHHcCCCcccccchHHHhhhcCChHhhHHHHHHHHHHHcCC
Confidence 321 233456888999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCEEEEEEechhHHhheeeeEEeccCCC----CCchhhhcccCCCCCC
Q 010144 450 LKKGDRILMISLGAGFKCNNCVWEVMKDLED----PNVWKDCIDRYPPKSL 496 (517)
Q Consensus 450 i~~Gd~VlliafG~G~t~~a~vlr~~~~~~~----~~~w~~~~~~~~~~~~ 496 (517)
+++||+||++|||+||+|++++|||++++++ +|||.||||+||| ++
T Consensus 469 ik~GD~Vl~iaFGsGft~~sav~~~~~~~~~~~~~~~~w~~~i~~yp~-~~ 518 (521)
T PLN02854 469 VSAGDRVWQIAFGSGFKCNSAVWKALREIPTGESTGNPWADSIDRYPV-KV 518 (521)
T ss_pred CCCCCEEEEEEEchhhhhhheeeEEeccCCccccCCCCchhhHhhCCC-CC
Confidence 9999999999999999999999999999874 4999999999999 77
|
|
| >PLN02192 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-92 Score=757.64 Aligned_cols=439 Identities=38% Similarity=0.692 Sum_probs=406.5
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHhHhhhhcCCCceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHH
Q 010144 46 LCQLSYFFFSFIMALLYLLPLFYIIFHLYKWVLQKRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFL 125 (517)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~ 125 (517)
+...+++.+++++.++++++|++++|+| +||++|||++++||+|++ +++++.+.++++....+.|++++++|+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~vylvd~~c~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~f~ 141 (511)
T PLN02192 69 LWEHLKFNLISVILCSTLLVFLSTLYFL------TRPRPVYLVDFSCYKPDD-SRKCTRKIFMDRSKLTGSFTEENLEFQ 141 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCcEEEEeeeeecCCc-cccccHHHHHHHHHHcCCCCHHHHHHH
Confidence 3455677889999999999999999999 999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHH
Q 010144 126 LKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIIN 205 (517)
Q Consensus 126 ~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~ 205 (517)
+|++++||++++||+|+.+++.|++ .+|+++|+|+++++++|+++||+++|++|+|||+||++||+++++|+++++|++
T Consensus 142 ~~~~~~sglg~~t~~p~~~~~~~~~-~~~~~~~~Ea~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~S~~~~~PSlaa~I~n 220 (511)
T PLN02192 142 RKILERSGLGESTYLPEAVLNVPPN-PCMAEARKEAETVMFGAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVIN 220 (511)
T ss_pred HHHHHhcCCCCcccCChhhccCCCC-ccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCchHHHHHHH
Confidence 9999999999999999999998885 599999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecc
Q 010144 206 RYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNR 285 (517)
Q Consensus 206 ~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~ 285 (517)
+||+++++.+||+++|||+||++||++|+++|+++++++||||++|.+|.+||.++||+++++|++|||||||+||++++
T Consensus 221 ~lGlr~~i~afdLsgmGCSggl~aLdlA~~lL~a~~~~~aLVVstE~~S~n~y~g~drs~lv~n~LFgDGAaAvLLs~~~ 300 (511)
T PLN02192 221 HYKLRGNILSYNLGGMGCSAGLISIDLAKHLLQVHPNSYALVISMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNKR 300 (511)
T ss_pred HhCCCCCceEEEcccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEEeccccCCCCCCHHHHhccccccccceEEEEeccc
Confidence 99999899999999999999999999999999999999999999999999999999999999999999999999999976
Q ss_pred cccccchhhccceeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHH
Q 010144 286 ALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYY 365 (517)
Q Consensus 286 ~~~~~~~~~l~~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~ 365 (517)
.++++++|++.+.++++.++|++.++++++++|.+|..|+.+++++|.+.+++++.++++++|.++|..++.++......
T Consensus 301 ~~~~~~k~~L~~~vrt~~~~dd~~~~~v~~~ed~~g~~g~~Lskdl~~vag~al~~ni~~l~p~vlp~~e~~~~~~~m~g 380 (511)
T PLN02192 301 SDRRRSKYQLVHTVRTHKGADDKCFACVTQEEDSAGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVG 380 (511)
T ss_pred cccccccceeeeeEEEEecCChhhccceecccccccceeeEecchhhhhhhhhhhhhhhhcccccCccchhhceeEEEcC
Confidence 55445789988888999999999999999999999999999999999999999999999999999887777665554444
Q ss_pred HHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHH
Q 010144 366 ENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYME 445 (517)
Q Consensus 366 ~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~ 445 (517)
+.+.+. +...+.|+|+.+|||||+||+|+++++.++++||++++++++|++++++||||||||+|++|++++
T Consensus 381 r~vfk~--------~~~~~~p~~~~~Idhf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSaSI~~aL~~~e 452 (511)
T PLN02192 381 KKLFKM--------KLKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSE 452 (511)
T ss_pred hHHHHH--------HhhhccHHHHHhhceEeeccCCHHHHHHHHHHcCCCchhhhHHHHHHhHcCChHHhHHHHHHHHHH
Confidence 444432 234567788899999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCCCEEEEEEechhHHhheeeeEEeccCCC--C-CchhhhcccCCCCCCCCccccc
Q 010144 446 AKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLED--P-NVWKDCIDRYPPKSLANPFQER 503 (517)
Q Consensus 446 ~~g~i~~Gd~VlliafG~G~t~~a~vlr~~~~~~~--~-~~w~~~~~~~~~~~~~~~~~~~ 503 (517)
++|++++||+||++|||+||+|++++|||++++++ . |||.||||+||| ++ |.++.
T Consensus 453 akgrik~GDrVl~iaFGsGf~~~sav~~~~~~~~~~~~~~~w~~~i~~yp~-~~--~~~~~ 510 (511)
T PLN02192 453 AKGRIKKGDRTWQIAFGSGFKCNSAVWKALRTVNPAKEKNPWMDEIHEFPV-DV--PKVST 510 (511)
T ss_pred HcCCCCCCCEEEEEEEcchHhhhhhheeeecccCCcccCCCchhhHHhCCC-CC--CCCCC
Confidence 99999999999999999999999999999999976 3 999999999999 88 88764
|
|
| >PLN02932 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-91 Score=746.01 Aligned_cols=433 Identities=39% Similarity=0.682 Sum_probs=404.0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhHhhhhcCCCceEEEEEEEEeCCCCCceecHHHHHHHHHhc---ccCChHH--
Q 010144 47 CQLSYFFFSFIMALLYLLPLFYIIFHLYKWVLQKRGQCCYMLAYECYKPCDETRRLDTESCARVVWRN---KKLGLEE-- 121 (517)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~---~~~~~~~-- 121 (517)
...+++.+++++.++++++|++++|+| +||++|||++++||+|++ +++++.+.++++.... +.|++++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~vyl~d~~c~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (478)
T PLN02932 36 YLYLQNNLTSLTMFFLYLALGSTLYLM------TRPKPVYLVDFSCYLPPS-HLKASIQTIMGHVRRVREAGAWKQESDY 108 (478)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh------cCCCcEEEEeeeeecCcc-cccccHHHHHHHHHhhcccCCCCccchh
Confidence 345677788999999999999999999 999999999999999999 9999999999998666 7888888
Q ss_pred -HHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHH
Q 010144 122 -YRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLT 200 (517)
Q Consensus 122 -~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a 200 (517)
++||+||+++|||++|+|+|+..++.++ ..+|+.+++|+++|+++|+++||+++|++|+|||+||++|+.++++|+++
T Consensus 109 ~~~f~~~i~~rsGig~~t~~p~~~~~~~~-~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dId~lIv~tst~~~~Psla 187 (478)
T PLN02932 109 LMDFCEKILERSGLGQETYIPEGLQCLPL-QQNLAVSRKETEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFNPTPSLS 187 (478)
T ss_pred HHHHHHHHHHHcCCCCceeeccccccCCH-HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCCcHH
Confidence 9999999999999999999998777665 45899999999999999999999999999999999999988778999999
Q ss_pred HHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEE
Q 010144 201 SRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSML 280 (517)
Q Consensus 201 ~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvL 280 (517)
++|+++||+++++.+|||+||||+||++||++|+++++++++++||||++|.+|.+|+.++++++++++++|||||||+|
T Consensus 188 a~V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~~~~~~~aLVVstE~~S~~~~~~d~r~~l~t~~LFgDGAAAvl 267 (478)
T PLN02932 188 SILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQVHRNTYALVVSTENITQNLYLGNNKSMLVTNCLFRIGGAAIL 267 (478)
T ss_pred HHHHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEeecccccCCCcchhhhccceeecccceEEE
Confidence 99999999988999999999999999999999999999999999999999999999888888888899999999999999
Q ss_pred EeecccccccchhhccceeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHH
Q 010144 281 LTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYV 360 (517)
Q Consensus 281 Ls~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~ 360 (517)
|++++.+.++++|++.++++++.++|++.++++++++|+.|..|+.+++++|..++++++.|++++||+++|..|+++++
T Consensus 268 Ls~~~~~~~~~~~~L~~~v~t~~~ad~~~~~~v~~~~d~~G~~g~~Lsk~lp~~~~~al~~ni~~~~p~v~p~~e~~~~~ 347 (478)
T PLN02932 268 LSNRSRDRKRAKYELVHTVRVHTGADDRSYECATQEEDEDGIVGVSLSKNLPMVAARTLKINIATLGPLVLPLSEKFHFF 347 (478)
T ss_pred EecccccccCcceEEEeeeeeeeccCCCccccceeecccCCcceeeECccchHHHHHHHhhhhhccccccccchhhhHHH
Confidence 99976443457899999899999999999999999988888889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHH
Q 010144 361 IQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYV 440 (517)
Q Consensus 361 ~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~ 440 (517)
+..+.+.+.+. ...++.++|+.+|||||+||+|++++++++++||++++++++|++++++||||||||+||+
T Consensus 348 ~~~~~~~~~k~--------~~~~~~~~~~~~id~f~iHqggr~IIdav~k~LgL~~~~~e~s~~tL~rfGNTSSaSI~~~ 419 (478)
T PLN02932 348 VRFVKKKFFNP--------KLKHYIPDFKLAFEHFCIHAGGRALIDEMEKNLHLTPLDVEASRMTLHRFGNTSSSSIWYE 419 (478)
T ss_pred HHHhHHHHHHH--------HhhcCcHhHHhhhceEEEccCCHHHHHHHHHHcCCChHHHHHHHHHHHHhCChhhhHHHHH
Confidence 98888777653 2567888888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCEEEEEEechhHHhheeeeEEeccCCC--CCchhhhcccCCCCCC
Q 010144 441 LGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLED--PNVWKDCIDRYPPKSL 496 (517)
Q Consensus 441 L~~~~~~g~i~~Gd~VlliafG~G~t~~a~vlr~~~~~~~--~~~w~~~~~~~~~~~~ 496 (517)
|++++++|++++||+||++|||+||+|++++||.+|++++ +|||.||||+||| ++
T Consensus 420 L~~~ea~grik~Gd~vl~iaFGsGf~~~s~vw~~~~~~~~~~~~~w~~~i~~yp~-~~ 476 (478)
T PLN02932 420 LAYTEAKGRMKKGDRIWQIALGSGFKCNSSVWVALRNVKPSANNPWEDCLHKYPV-EI 476 (478)
T ss_pred HHHHHHcCCCCCCCEEEEEEEeccHHHHHHHHHHhcCCCCcCCCCchhhHhhCCC-CC
Confidence 9999999999999999999999999999999999999986 6999999999999 65
|
|
| >PLN02377 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-90 Score=738.07 Aligned_cols=433 Identities=39% Similarity=0.702 Sum_probs=398.6
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHhHhhhhcCCCceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHH
Q 010144 46 LCQLSYFFFSFIMALLYLLPLFYIIFHLYKWVLQKRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFL 125 (517)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~ 125 (517)
+...+++.+++++.++++++|++++|+| +||++||+++++||+|++ +++++.+.++++....+.|++++++|+
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~vylvd~~c~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~f~ 137 (502)
T PLN02377 65 LWIHLQYNLVSIIICSAFLVFGLTVYIM------TRPRPVYLVDYSCYRAPD-HLKAPFARFMEHSRLTGDFDDSSLEFQ 137 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCCEEEEeeeeecCCc-cccccHHHHHHHHHHhCCCCHHHHHHH
Confidence 3445677788999999999999999999 999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHH
Q 010144 126 LKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIIN 205 (517)
Q Consensus 126 ~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~ 205 (517)
+|+++++||++++|+|+.+++.+++ .+|+++++|+++++++|+++||+++|++|+|||+||++||+++++|+++++|++
T Consensus 138 ~ri~~~sgig~~t~~p~~~~~~~~~-~~~~~~~~ea~~l~~~A~~~aL~kaGi~p~dID~LVv~cS~~~~~PSlaa~V~~ 216 (502)
T PLN02377 138 RKILERSGLGEDTYVPEAMHYIPPR-PSMAAAREEAEQVMFGALDNLFANTNVNPKDIGILVVNCSLFNPTPSLSAMIVN 216 (502)
T ss_pred HHHHHhcCCCCccccCchhccCCcc-chHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHH
Confidence 9999999999999999988887774 589999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecc
Q 010144 206 RYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNR 285 (517)
Q Consensus 206 ~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~ 285 (517)
+||+++++.+|||++|||+||++||++|+++++++++++||||++|.+|.+|+.++++++++++++|||||||+||++++
T Consensus 217 ~LGlr~~v~afdL~gmGCsggl~aL~lA~~ll~~~~~~~aLVVstE~~S~~~~~~d~~s~lv~n~LFgDGAaAvlLs~~~ 296 (502)
T PLN02377 217 KYKLRGNIRSFNLGGMGCSAGVIAVDLAKDMLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKS 296 (502)
T ss_pred HhCCCCCCeEEecccchhhHHHHHHHHHHHHHHcCCCCEEEEEEEeccccccCCCCCccccccceeeccccEEEEEeccc
Confidence 99999899999999999999999999999999999999999999999999888777788889999999999999999976
Q ss_pred cccccchhhccceeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHH-HH
Q 010144 286 ALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQ-SY 364 (517)
Q Consensus 286 ~~~~~~~~~l~~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~-~v 364 (517)
.+.++++|++.++++++.++|++.++++++++|+.|..|+++++++|.+.+++++.+++++||.++|.+|++.+++. .+
T Consensus 297 ~~~~~a~~~l~~iv~t~~~~d~~~~~~i~~~~d~~G~~g~~ls~dl~~v~g~~l~~~i~~lg~~vl~~se~~~~~a~~~~ 376 (502)
T PLN02377 297 RDKRRSKYKLVHVVRTHRGADDKAFRCVYQEQDDAGKTGVSLSKDLMAIAGEALKTNITTLGPLVLPISEQLLFFATLVV 376 (502)
T ss_pred ccccccccccceEEEEEEEEcCCccceeeeccccCCCCCCCCCcchhhHhhHHHHHHHHHhcccccchHHHHHHHHHHHH
Confidence 55456789888999999999999999999988877888889999999999999999999999999998887765544 44
Q ss_pred HHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHH
Q 010144 365 YENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYM 444 (517)
Q Consensus 365 ~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~ 444 (517)
++.+.+.+ +.+.|++++||||||+||+|++++++++++||++++++++|++++++||||||||+|++|+++
T Consensus 377 ~~~~~~~l---------~~~~p~~~~didhf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~r~GNTSSaSI~~aL~~~ 447 (502)
T PLN02377 377 KKLFNKKM---------KPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYI 447 (502)
T ss_pred HHHHHHHH---------hhccCCcHhhcCEEEECCCCHHHHHHHHHHcCCCcccchHHHHHHHhcCCchhhHHHHHHHHH
Confidence 44444333 234456789999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCCCEEEEEEechhHHhheeeeEEeccCCC--CCchhhhcccCCCCCC
Q 010144 445 EAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLED--PNVWKDCIDRYPPKSL 496 (517)
Q Consensus 445 ~~~g~i~~Gd~VlliafG~G~t~~a~vlr~~~~~~~--~~~w~~~~~~~~~~~~ 496 (517)
+++|++++||+||++|||+||+|++++||+++++++ +|||.||||+||| ++
T Consensus 448 ~~~grik~Gd~VlliaFGsGf~~~s~v~~~~~~~~~~~~~~w~~~i~~yp~-~~ 500 (502)
T PLN02377 448 EAKGRMRKGNRVWQIAFGSGFKCNSAVWEALRHVKPSNNSPWEDCIDKYPV-KL 500 (502)
T ss_pred HHcCCCCCCCeEEEEEEccccEeeeEEEEEecCCCCCCCCCchhhHhhCCC-cc
Confidence 999999999999999999999999999999999986 6999999999999 54
|
|
| >PLN00415 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-86 Score=697.74 Aligned_cols=414 Identities=40% Similarity=0.760 Sum_probs=387.8
Q ss_pred HHHHHHHHhHhhhhcCCCceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCc
Q 010144 66 LFYIIFHLYKWVLQKRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVV 145 (517)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~ 145 (517)
..+++|+| +||++||+++++||.|++ +++++.+.++++....+.|++++++|++|+++++||++++|.|+..+
T Consensus 47 ~~~~~~~~------~~~~~vylvd~~c~~p~~-~~~~~~~~~~~~~~~~~~~~~~s~~F~~~i~~rSGlg~et~~p~~~~ 119 (466)
T PLN00415 47 IFFYAYST------TRSKPVYLVDFSCHQPTD-SCKISSETFFNMAKGAQLYTEETIQFMTRILNRSGLGDDTYSPRCML 119 (466)
T ss_pred HHHHHHHH------cCCCcEEEEeeeeecCCc-cccccHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCCCCeeeCCccc
Confidence 35678999 999999999999999999 99999999999999999999999999999999999999999999988
Q ss_pred CCCCCCccHHHhHhhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchH
Q 010144 146 EGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSA 225 (517)
Q Consensus 146 ~~~~~~~~m~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsg 225 (517)
..++. ++|+++++|+++.++.|+++||+++|++|+|||+||++||+++++|+++++|+++||+++++.+|||++|||+|
T Consensus 120 ~~~~~-~~~~~~~~e~em~i~~A~~~aL~~aGi~p~dID~LIvs~T~~~~~Pslaa~l~~~LGLr~~v~~~dL~gmGCsg 198 (466)
T PLN00415 120 TSPPT-PSMYEARHESELVIFGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVKTYNLSGMGCSA 198 (466)
T ss_pred cCCCC-CChhhhHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCCCchHHHHHHHHhCCCCCceEEEeccccchH
Confidence 87764 58999999999999999999999999999999999999998889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeeeecc
Q 010144 226 SVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGS 305 (517)
Q Consensus 226 gl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~t 305 (517)
++.||++|+++++++++++||||++|.+|.+|++++|+++++++++|||||||+||++++.++++++|+|.++++++.+.
T Consensus 199 gv~aL~lA~~ll~a~~~~~aLVVs~E~~S~~~~~~~dr~~lv~n~LFgDGAAAvlLs~~~~~~~~~~~~L~~~vrt~~~~ 278 (466)
T PLN00415 199 GAISVDLATNLLKANPNTYAVIVSTENMTLSMYRGNDRSMLVPNCLFRVGGAAVMLSNRSQDRVRSKYELTHIVRTHKGS 278 (466)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEEEecccccccCCCcHhHhccceeecccceEEEEecCcccccCccceeeeEEEecCCC
Confidence 99999999999999999999999999999988888899999999999999999999998765556899999999999988
Q ss_pred CcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCC
Q 010144 306 NDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAG 385 (517)
Q Consensus 306 d~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~ 385 (517)
+++.+.|+++.+|++|..|+.+++++|.+++++++.|+++++|.++|..|++++....+.+++.+. +...+.
T Consensus 279 ~d~~~~~~~~~~d~~G~~gv~Lsk~lp~va~~~l~~ni~~l~p~vlp~~e~~~~~~~~i~~~~~~~--------~~~~~~ 350 (466)
T PLN00415 279 SDKHYTCAEQKEDSKGIVGVALSKELTVVAGDTLKTNLTALGPLVLPLSEKLRFILFLVKSKLFRL--------KVSPYV 350 (466)
T ss_pred ChhhhcceeeeecCCCcceEEEChHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHhhhhhhc--------cCCCCC
Confidence 888999999999999988999999999999999999999999999999999999988887776542 234577
Q ss_pred CCcccccceeecCCCChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEEEechhH
Q 010144 386 LNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGF 465 (517)
Q Consensus 386 ~d~~~did~~~~Hq~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~VlliafG~G~ 465 (517)
|||+..++|||+|+||++|+|+++++||++++++++|+++|++||||||+|+||+|++++++++.++||++|++|||+||
T Consensus 351 pd~~~~~~hf~iHpGGraVLdave~~LgL~~~~le~Sr~vL~r~GN~SSsSV~yvL~~~~~~~~~~~Gdrvl~iaFGpGf 430 (466)
T PLN00415 351 PDFKLCFKHFCIHAGGRALLDAVEKGLGLSEFDLEPSRMTLHRFGNTSSSSLWYELAYVEAKCRVKRGDRVWQLAFGSGF 430 (466)
T ss_pred CCccccceeEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhhHHHHHHHHHhhccCCCCCEEEEEEEcCcc
Confidence 88766799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhheeeeEEeccCCC--C---CchhhhcccCCCCCC
Q 010144 466 KCNNCVWEVMKDLED--P---NVWKDCIDRYPPKSL 496 (517)
Q Consensus 466 t~~a~vlr~~~~~~~--~---~~w~~~~~~~~~~~~ 496 (517)
+|++++||++|++++ + |||.||||+||| ++
T Consensus 431 ~~es~v~~~~~~~~~~~~~~~~~w~~~i~~yp~-~~ 465 (466)
T PLN00415 431 KCNSIVWRALRTIPANESLVGNPWGDSVHKYPV-HV 465 (466)
T ss_pred hhhHhHHHHhccCCcccccCCCCchhhHHhCCC-CC
Confidence 999999999999876 2 999999999999 54
|
|
| >PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-65 Score=506.70 Aligned_cols=289 Identities=43% Similarity=0.735 Sum_probs=280.4
Q ss_pred HHHhHhhhhcCCCceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCC
Q 010144 71 FHLYKWVLQKRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREE 150 (517)
Q Consensus 71 ~~~~~~~~~~~~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~ 150 (517)
|+| +|+++|||++++||.|++ +++++.+.+++++...+.|++++++|++||++++||+++||+|+.+++.+++
T Consensus 1 y~~------~R~r~VYLvDfac~kP~~-~~~v~~~~~~e~~~~~~~f~~~sl~F~~kIlerSGlG~eTy~P~~~~~~p~~ 73 (290)
T PF08392_consen 1 YFM------RRPRPVYLVDFACYKPPD-ELRVSREEFIEHARRCGRFDEESLDFQRKILERSGLGDETYLPPALHEIPPD 73 (290)
T ss_pred Ccc------CCCCCEEEEeeeecCCCc-ccccCHHHHHHHHHhcccCChhHHHHHHHHHHhcCCCccccCCcccccCCCc
Confidence 677 999999999999999999 9999999999999999999999999999999999999999999998887775
Q ss_pred CccHHHhHhhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHH
Q 010144 151 SPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAV 230 (517)
Q Consensus 151 ~~~m~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL 230 (517)
.+|.++++|++.+++.|++++|+++|++|+|||.||++||.++++||+++||++++|+++++.+||++||||++++.+|
T Consensus 74 -~s~~~a~~Eae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~~nLsGMGCsAgliai 152 (290)
T PF08392_consen 74 -PSLAAAREEAEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKSYNLSGMGCSAGLIAI 152 (290)
T ss_pred -ccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeeeecccCCcchhhHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccc
Q 010144 231 DLVQQLFRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAY 310 (517)
Q Consensus 231 ~lA~~lL~ag~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~ 310 (517)
++|+++|+.+|+.+||||++|++|.+||.++||+++++||+|+|||||+|||+++.++++++|+|.|++++|.++|++.|
T Consensus 153 ~lA~~lL~~~p~~~ALVVstE~~s~~~Y~G~~rsmlv~NcLFr~GgAAvLLSn~~~~~~~aky~L~~~vRt~~g~~d~ay 232 (290)
T PF08392_consen 153 DLAKDLLQAHPNSYALVVSTENISANWYRGNDRSMLVSNCLFRMGGAAVLLSNKPSDRRRAKYELLHTVRTHTGADDDAY 232 (290)
T ss_pred HHHHHHHHhCCCcEEEEEEEeecccccccCCcHHHhhccccccCCceeEEeecCccccccchhhhhheeeeecCCCCCce
Confidence 99999999999999999999999999999999999999999999999999999999888899999999999999999999
Q ss_pred cceeeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHH
Q 010144 311 ECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYEN 367 (517)
Q Consensus 311 ~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~ 367 (517)
+|+++++|++|..|+.++|+++.+++++++.||+++||++||.+|+++|+.+.+.++
T Consensus 233 ~~v~q~eD~~g~~Gv~lsk~l~~vag~al~~ni~~l~p~vLP~sE~~~~~~~~~~rk 289 (290)
T PF08392_consen 233 RCVFQEEDEEGIVGVSLSKDLMKVAGKALKANITTLGPLVLPLSEQLRFAASFIARK 289 (290)
T ss_pred eeEEEeEcCCCceEEEEecchHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999877654
|
The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane |
| >COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-58 Score=471.51 Aligned_cols=321 Identities=20% Similarity=0.277 Sum_probs=283.8
Q ss_pred CceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhhHH
Q 010144 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMD 162 (517)
Q Consensus 83 ~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~ea~ 162 (517)
++++|.++|.|+|++ +++|+++.+....+ ++ +|..++||++||+..++ +..++|
T Consensus 2 ~~a~i~g~G~~lP~~---~vtn~d~e~~~~ts----de------wI~~rtGir~R~~a~~~-----e~~s~l-------- 55 (323)
T COG0332 2 MNAKILGIGSYLPER---VVTNADLEKRVDTS----DE------WIETRTGIRERRIAADD-----ETTSDL-------- 55 (323)
T ss_pred CcceEEEEEeecCCc---ccChHHHHhccCCC----cc------eeeeecCCceeeecCCC-----ccHHHH--------
Confidence 468999999999999 99999999665543 33 79999999999998764 545555
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCC
Q 010144 163 EIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYK 241 (517)
Q Consensus 163 ~la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~ 241 (517)
+++|+++||+++|++|+|||+||++| ||++++|++|++||++||+. ++.+||++. +|+|+++||++|.+++++|.
T Consensus 56 --a~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq~~LG~~-~~~afDl~a-aCsgf~yaL~~A~~~i~sG~ 131 (323)
T COG0332 56 --AVEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLG-GAPAFDLQA-ACSGFLYALSVADGLIRSGG 131 (323)
T ss_pred --HHHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHHHHhCCC-Ccceeechh-hhHHHHHHHHHHHHHHHcCC
Confidence 79999999999999999999999985 68999999999999999998 699999997 99999999999999999999
Q ss_pred CCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccccceeeccccCC
Q 010144 242 NKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQG 321 (517)
Q Consensus 242 ~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~~~~~~~~g 321 (517)
+++||||++|++|+ +.+++||.+ ..+|||||+|+||++.+.+. +++.+++++|+..++.++.+.....
T Consensus 132 ~k~vLVVg~e~~S~-~ld~~dR~t---~vlFgDGAgAvvl~~~~~~~--------~i~~~~l~sdg~~~~~l~~~~~~~~ 199 (323)
T COG0332 132 YKNVLVVGAETLSR-ILDWTDRDT---CVLFGDGAGAVVLEATEDDN--------GILDTDLGSDGSQGDLLYLPGGGSA 199 (323)
T ss_pred CCEEEEEehhHhhc-cCCHhhccc---eEEEcCCceEEEEecCCCCc--------CeeeeeeeccccCCCeeeccCCCCc
Confidence 99999999999998 678889976 89999999999999987332 5788999999998877776543211
Q ss_pred CCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCC
Q 010144 322 HPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGG 401 (517)
Q Consensus 322 ~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~ 401 (517)
. .+. ... .+.+.|.+.++|++++..+++.++++| +++++.+ +|||||++||+|
T Consensus 200 ~-----~~~-----------~~~-~~~~~m~Gr~vfk~av~~~~~~~~~~L-------~~~~l~~---~dId~~vpHQan 252 (323)
T COG0332 200 T-----PKE-----------ESG-GGLLVMDGREVFKFAVRAMPKAIEEVL-------EKAGLTP---EDIDWFVPHQAN 252 (323)
T ss_pred c-----ccc-----------ccc-ccceeeccHHHHHHHHHHHHHHHHHHH-------HHcCCCH---HHCCEEcccccc
Confidence 1 000 001 245678889999999999999999998 8999995 999999999999
Q ss_pred hHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEEEechhHHhheeeeEEe
Q 010144 402 RAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVM 475 (517)
Q Consensus 402 ~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~VlliafG~G~t~~a~vlr~~ 475 (517)
.++++.++++||+|++++ ..++++|||||+||+|++|++++++|++++||+|++.+||+|++||++++||.
T Consensus 253 ~ri~~~i~~~l~~~~~k~---~~~~~~yGNtsaAsiplaL~~~~~~g~ik~Gd~ill~~fG~Gltwg~~~~r~~ 323 (323)
T COG0332 253 LRIIEAIAKKLGIPEEKV---VVTVDKYGNTSAASIPLALDEALREGRIKPGDLVLLEAFGGGLTWGAALVRWG 323 (323)
T ss_pred HHHHHHHHHHcCCCHHHH---hhHHHHhcccccchHHHHHHHHhhhCCCCCCCEEEEEeecCcceeeeEEEEeC
Confidence 999999999999999999 68999999999999999999999999999999999999999999999999983
|
|
| >cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-51 Score=426.40 Aligned_cols=346 Identities=34% Similarity=0.504 Sum_probs=272.3
Q ss_pred ceEEEEEEEEeCCCCCceecHHHHHHHHHhccc--CChHHHHHHHHHHHHhCCceeEeccC--CCcCC------CCCCcc
Q 010144 84 CCYMLAYECYKPCDETRRLDTESCARVVWRNKK--LGLEEYRFLLKNMVSSGIGEETYGPR--NVVEG------REESPS 153 (517)
Q Consensus 84 ~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~--~~~~~~~~~~ri~~~sGI~~r~~~~~--~~~~~------~~~~~~ 153 (517)
.++|.++++|+|++ +++|+++.+.+..... +.+...+..++|++++||++|+++.+ ..... +.-...
T Consensus 1 ~~~I~~~~~~~P~~---~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gI~~R~~~~~~~~~~~~~~~~~~~~~~~~ 77 (361)
T cd00831 1 AATILAIGTAVPPH---RVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGGEETYAPRPEMSPSLDER 77 (361)
T ss_pred CcEEEEEEEeCCCC---cCCHHHhhHHHHhcCChhhhHHHHHHHHHHHhhcceeEEEEEecCchhhcCCccccCCCcCcc
Confidence 37899999999999 9999999998764321 11334556678999999999999875 21100 111124
Q ss_pred HHHhHhhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHH
Q 010144 154 LAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLV 233 (517)
Q Consensus 154 m~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA 233 (517)
.+.+.+++.+|+.+|+++||+++|++|+|||+||++|+.++..|+++++|+++||+++++.+||++++||+|++.||++|
T Consensus 78 ~~~~~~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~~~~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A 157 (361)
T cd00831 78 NDIALEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLA 157 (361)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCcccchhccccccchhHHHHHHHH
Confidence 56788999999999999999999999999999999877778899999999999999877999999967999999999999
Q ss_pred HHHHHcCCCCEEEEEEecCCCCCCCCCCC-ccccccccccccceEEEEEeecccccc--cchhhccceeeeeeccCcccc
Q 010144 234 QQLFRTYKNKLAIVVSTESMGPNWYCGRE-KSMMLSNILFRSGGCSMLLTNNRALKH--KAILKLNCLVRTHFGSNDEAY 310 (517)
Q Consensus 234 ~~lL~ag~~~~aLVVs~E~~s~~~~~~~d-r~~lv~~~lfGDGAAAvLLs~~~~~~~--~~~~~l~~i~~t~~~td~~~~ 310 (517)
.+++++++.++||||++|.+|. ++++.| +++++++++|||||+|+||++++.... ...+++.+...... .++ .
T Consensus 158 ~~~~~~~~~~~aLvv~~e~~s~-~~~~~d~~~~~~~~~lfGDgaaA~ll~~~~~~~~~~~~~~~~~~~~~~~~-p~~--~ 233 (361)
T cd00831 158 KDLLEANPGARVLVVSTELCSL-WYRGPDHRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLL-PDS--E 233 (361)
T ss_pred HHHHHHCCCCEEEEEEeecccc-eeCCCCcHHHhhhhhhccCCceEEEEEcCCCcccccccceeeecccceee-ecC--C
Confidence 9999999999999999999998 566666 666667899999999999998765321 11222221111101 010 0
Q ss_pred cceeeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhh--CCCCCc
Q 010144 311 ECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVL--GAGLNL 388 (517)
Q Consensus 311 ~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~--g~~~d~ 388 (517)
+.+..... ..++.+ .+ ..+++.++...+++.+.++| ++. |+.+
T Consensus 234 ~~~~~~~~---~~~~~~-----------------~~------~~~v~~~~~~~~~~~i~~~L-------~~~~~g~~~-- 278 (361)
T cd00831 234 DAMGWHLG---EEGLTF-----------------VL------SRDVPRLVEKNLERVLRKLL-------ARLGIGLFK-- 278 (361)
T ss_pred CceEEEEE---cceEEE-----------------Ee------ChhHHHHHHHHHHHHHHHHh-------ccccCCCcc--
Confidence 00000000 001100 01 13455666667788888887 678 8885
Q ss_pred ccccceeecCCCChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEEEechhHHhh
Q 010144 389 KAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCN 468 (517)
Q Consensus 389 ~~did~~~~Hq~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~VlliafG~G~t~~ 468 (517)
+|||+|++||+|+++++.+++.||++++++.+|+.++++||||+|||+|++|++++++|++++||+|++++||+|++|+
T Consensus 279 -~did~~~~H~~~~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~ 357 (361)
T cd00831 279 -LAFDHWCVHPGGRAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAYMEAKGRVKRGDRGLLIAFGPGFTCE 357 (361)
T ss_pred -ccceEEEECCCChHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHHHHHHhCCCCCCCEEEEEEEcCCceee
Confidence 8999999999999999999999999999998888999999999999999999999999999999999999999999999
Q ss_pred eeee
Q 010144 469 NCVW 472 (517)
Q Consensus 469 a~vl 472 (517)
+++|
T Consensus 358 ~~l~ 361 (361)
T cd00831 358 SAVW 361 (361)
T ss_pred eeeC
Confidence 9986
|
PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions. |
| >PLN03172 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-50 Score=427.14 Aligned_cols=351 Identities=17% Similarity=0.220 Sum_probs=269.7
Q ss_pred CCceEEEEEEEEeCCCCCceecHHHHHHHHHhcccC-C-hHHHHHHHHHHHHhCCceeEeccCC-CcC--CC------CC
Q 010144 82 GQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKL-G-LEEYRFLLKNMVSSGIGEETYGPRN-VVE--GR------EE 150 (517)
Q Consensus 82 ~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~-~-~~~~~~~~ri~~~sGI~~r~~~~~~-~~~--~~------~~ 150 (517)
..+++|.++|+..|++ .++|+++.+.+....+. + ++..+.+++|++++||++||...+. ... .. |+
T Consensus 14 ~~~~~I~~igta~P~~---~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~ 90 (393)
T PLN03172 14 EGPATILAIGKATPAN---CVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPS 90 (393)
T ss_pred CCCeEEEEEEecCCCc---cccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhCccccccCCCC
Confidence 3568999999999999 99999999988654311 1 2223336789999999999975421 111 00 11
Q ss_pred -CccHHHhHhhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHH
Q 010144 151 -SPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVA 229 (517)
Q Consensus 151 -~~~m~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~A 229 (517)
...+..+.+++.+|+.+|+++||+++|++++|||+||++|+.....|+++++|+++||+++++.++.+.+|||+|++.|
T Consensus 91 ~~~r~~~~~~~a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~a 170 (393)
T PLN03172 91 LDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRFMMYQQGCFAGGTV 170 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceEEeeeCCchHHHHHH
Confidence 1235668899999999999999999999999999999875544459999999999999997776654444699999999
Q ss_pred HHHHHHHHHcCCCCEEEEEEecCCCCCCCCCCC--ccccccccccccceEEEEEeeccccc-ccchhhccceeeee-ecc
Q 010144 230 VDLVQQLFRTYKNKLAIVVSTESMGPNWYCGRE--KSMMLSNILFRSGGCSMLLTNNRALK-HKAILKLNCLVRTH-FGS 305 (517)
Q Consensus 230 L~lA~~lL~ag~~~~aLVVs~E~~s~~~~~~~d--r~~lv~~~lfGDGAAAvLLs~~~~~~-~~~~~~l~~i~~t~-~~t 305 (517)
|++|++++++++.++||||++|.+|.++.++.| .++++++++|||||+|+||++.+... .++.|++.+...+. ..+
T Consensus 171 L~~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvVl~~~~~~~~~~~~~~i~~~~~~~~~~t 250 (393)
T PLN03172 171 LRLAKDLAENNAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKIERPLFEIVSAAQTILPDS 250 (393)
T ss_pred HHHHHHHHHcCCCCeEEEEEEehhhhhhcccccccHHhhhccchhcCceEEEEEecCCCCcccCceeEEeeeccEEecCC
Confidence 999999999999999999999999975655444 34567889999999999999865421 22345554432222 234
Q ss_pred CcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCC
Q 010144 306 NDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAG 385 (517)
Q Consensus 306 d~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~ 385 (517)
++.....+.. .| .++.+++++|. ++...+++.+.+.| ++.|+.
T Consensus 251 ~~~~~~~i~~----~G-~~~~l~~~vp~-------------------------~~~~~i~~~~~~~L-------~~~gl~ 293 (393)
T PLN03172 251 DGAIDGHLRE----VG-LTFHLLKDVPG-------------------------LISKNIEKSLVEAF-------APIGIN 293 (393)
T ss_pred cccccceEEc----CC-cEEEEechHHH-------------------------HHHHHHHHHHHHHh-------hhcCCC
Confidence 4432222221 11 12334454444 44445556666666 678887
Q ss_pred CCcccccceeecCCCChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHH----HcCCCCCC---CEEEE
Q 010144 386 LNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYME----AKKRLKKG---DRILM 458 (517)
Q Consensus 386 ~d~~~did~~~~Hq~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~----~~g~i~~G---d~Vll 458 (517)
+ .||++|++||+|++|++.+++.||++++++.+|++++++||||||||+|+.|+++. ++|++++| |++++
T Consensus 294 ~---~di~~~~~Hqgg~~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~G~~~~~~ll 370 (393)
T PLN03172 294 D---WNSIFWIAHPGGPAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEMRKKSIEEGKGSTGEGLEWGVL 370 (393)
T ss_pred c---cccceEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHHHhhhhhcCCCCCCCCcceEEE
Confidence 4 89999999999999999999999999999999999999999999999999999986 45777777 89999
Q ss_pred EEechhHHhheeeeEEe
Q 010144 459 ISLGAGFKCNNCVWEVM 475 (517)
Q Consensus 459 iafG~G~t~~a~vlr~~ 475 (517)
+|||+|++|+++++||.
T Consensus 371 ~afGpG~t~~~~ll~~~ 387 (393)
T PLN03172 371 FGFGPGLTVETVVLHSV 387 (393)
T ss_pred EEeCCcceeeeeeeEec
Confidence 99999999999999994
|
|
| >PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-50 Score=419.59 Aligned_cols=337 Identities=14% Similarity=0.177 Sum_probs=268.1
Q ss_pred cCCCceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHh
Q 010144 80 KRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFS 159 (517)
Q Consensus 80 ~~~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~ 159 (517)
.+.++++|.++++|+|++ +++++++.+..... +. ...+++.+++||++||++.++ +++
T Consensus 3 ~~~~~~~I~~~g~~lP~~---~v~~~~~~~~~~~~----~~--~~~~~i~~~~Gi~~R~~~~~~-----e~~-------- 60 (353)
T PRK12880 3 TRFDKAKISGICVSVPEH---KICIDDELESVFSN----DI--KTLKRMKKVIGLNTRYICDEN-----TCV-------- 60 (353)
T ss_pred ccccccEEEEEEEECCCe---EecHHHHHHHhcCc----ch--hhhhhhhhccCceEEEeCCCC-----CCH--------
Confidence 456789999999999999 99999765433211 11 124578889999999998653 433
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHH
Q 010144 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVN-VSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (517)
Q Consensus 160 ea~~la~~Aa~~aL~~agi~p~dID~LI~a-~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ 238 (517)
.+|+.+|+++||+++|++|+|||+||++ +++++..|+++++|+++||+++++.+||+++ ||+|++.||++|+++++
T Consensus 61 --~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~~~~~~di~~-~C~g~~~aL~~A~~~i~ 137 (353)
T PRK12880 61 --SDLGKHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSSKTIAFDLGQ-ACAGYLYGLFVAHSLIQ 137 (353)
T ss_pred --HHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCceEEehhh-hhHHHHHHHHHHHHHHH
Confidence 3558999999999999999999999987 4679999999999999999988899999986 99999999999999999
Q ss_pred cCCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccccceeeccc
Q 010144 239 TYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVED 318 (517)
Q Consensus 239 ag~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~~~~~~ 318 (517)
+++.+ ||||++|.+|. +.++.|+.. ..+|||||+|+||+++++.. .. ....+|+..++.+..+.+
T Consensus 138 ~~~~~-~LVv~~e~~S~-~~~~~d~~~---~~lFGDGAaA~vl~~~~~~~--------~~--~~~~~~~~~~~~~~~p~g 202 (353)
T PRK12880 138 SGLGK-ILLICGDTLSK-FIHPKNMNL---APIFGDGVSATLIEKTDFNE--------AF--FELGSDGKYFDKLIIPKG 202 (353)
T ss_pred cCCCC-EEEEEehhhhc-cCCcccCCc---eeeecccceEEEEEecCCCC--------ce--EEEEecCCCCCeEEecCC
Confidence 99988 99999999998 455566543 68999999999999765421 11 345778887887777654
Q ss_pred cCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecC
Q 010144 319 QQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLH 398 (517)
Q Consensus 319 ~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~H 398 (517)
+....+.....+..... ....+....+.|++.++|+++...+++.+.++| +++|+++ +|||+|++|
T Consensus 203 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L-------~~~gl~~---~did~~v~H 268 (353)
T PRK12880 203 AMRIPKADIFNDDSLMQ----TEEFRQLENLYMDGANIFNMALECEPKSFKEIL-------EFSKVDE---KDIAFHLFH 268 (353)
T ss_pred CcCCCcccccccccccc----ccccccCceEEEcCHHHHHHHHHHHHHHHHHHH-------HHcCCCH---HHCCEEEEC
Confidence 32111111100000000 001122234567889999999999999999988 8899985 999999999
Q ss_pred CCChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEEEechhHHhheeeeEEec
Q 010144 399 PGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMK 476 (517)
Q Consensus 399 q~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~VlliafG~G~t~~a~vlr~~~ 476 (517)
|+|+++++.+.++||++++++. ..++++||||||||+|+.|++..++|+++ +++++||+|++|+++++||.+
T Consensus 269 Q~~~~i~~~i~~~Lgl~~ek~~--~~~l~~~GNtssasip~~L~~~~~~~~~~----~ll~~~G~G~s~g~~ll~~~~ 340 (353)
T PRK12880 269 QSNAYLVDCIKEELKLNDDKVP--NFIMEKYANLSACSLPALLCELDTPKEFK----ASLSAFGAGLSWGSAVLNFKD 340 (353)
T ss_pred CCCHHHHHHHHHHhCCCHHHhh--hhhHHhhCCHHHHHHHHHHHHHHHcCCcE----EEEEEEchhhhheEeEEEECC
Confidence 9999999999999999999982 35689999999999999999999877764 999999999999999999943
|
|
| >PLN03169 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-50 Score=423.37 Aligned_cols=353 Identities=16% Similarity=0.161 Sum_probs=270.0
Q ss_pred cCCCceEEEEEEEEeCCCCCceecHHHHHHHHHhc-ccCChHHHHHHHHHHHHhCCceeEeccCCC-cC-----CCCCCc
Q 010144 80 KRGQCCYMLAYECYKPCDETRRLDTESCARVVWRN-KKLGLEEYRFLLKNMVSSGIGEETYGPRNV-VE-----GREESP 152 (517)
Q Consensus 80 ~~~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~-~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~-~~-----~~~~~~ 152 (517)
..|.+++|.++|+++|++ +++|+++.+.+... ...++...+.+++|++++||++||++.+.. .. .++..+
T Consensus 17 ~~~~~~~I~gigt~~P~~---~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~ 93 (391)
T PLN03169 17 ANPGKATILALGKAFPSQ---LVPQEYLVDGYFRDTKCDDPALKEKLERLCKTTTVKTRYVVMSKEILDKYPELATEGTP 93 (391)
T ss_pred CCCCCeEEEEEEeeCCCe---ecCHHHHHHHHHHHhcccCHHHHHHHHHHHHhCCcceeeEeccccchhhCccccccCCC
Confidence 467789999999999999 99999999865432 111232234467899999999999875210 00 001112
Q ss_pred c----HHHhHhhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCe-eEEEecCCcchHHH
Q 010144 153 S----LAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDI-KAFNLSGMGCSASV 227 (517)
Q Consensus 153 ~----m~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~-~~~dl~~mgCsggl 227 (517)
+ +..+.+.+.+|+.+|+++||+++|++|+|||+||++|++++..|+++++|+++||+++++ .++|++. ||+|++
T Consensus 94 ~~~~r~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~d~~~-gC~g~~ 172 (391)
T PLN03169 94 TIKQRLDIANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQRVMLYFL-GCSGGV 172 (391)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcCCCCCCcHHHHHHHHhCcCCcceeeecccC-hhHHHH
Confidence 3 334678899999999999999999999999999998778999999999999999998776 4799995 999999
Q ss_pred HHHHHHHHHHHcCCCCEEEEEEecCCCCCCCCCC-C-ccccccccccccceEEEEEeeccccc-ccchhhccceeeeeec
Q 010144 228 VAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGR-E-KSMMLSNILFRSGGCSMLLTNNRALK-HKAILKLNCLVRTHFG 304 (517)
Q Consensus 228 ~AL~lA~~lL~ag~~~~aLVVs~E~~s~~~~~~~-d-r~~lv~~~lfGDGAAAvLLs~~~~~~-~~~~~~l~~i~~t~~~ 304 (517)
+||++|.+++++++.++||||++|.++..+.... + ....+..++|||||+|+||++++... ....+++ .
T Consensus 173 ~aL~~A~~~~~~~~~~~vLvv~~e~~s~~~~~~~~~~~~d~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~l--------~ 244 (391)
T PLN03169 173 AGLRVAKDIAENNPGSRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADPIPVSESPFFEL--------H 244 (391)
T ss_pred HHHHHHHHHHHhCCCCeEEEEEEEcChhhccCCCccchhhhhhhhhccCceEEEEEecCCCcccCCcceEE--------E
Confidence 9999999999999999999999999987543211 1 22334578999999999999865420 0111211 1
Q ss_pred cCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCC
Q 010144 305 SNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGA 384 (517)
Q Consensus 305 td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~ 384 (517)
+++.. +.+.. .+.... .+...|...+.+.++++++...+++.+.++| ++.|+
T Consensus 245 ~~~~~----~ip~~-~~~~~~----------------~~~~~g~~~~~g~~v~~~~~~~~~~~i~~~L-------~~~gl 296 (391)
T PLN03169 245 TAIQQ----FLPGT-EKTIDG----------------RLTEEGINFKLGRELPQKIEDNIEGFCKKLM-------KKAGL 296 (391)
T ss_pred eeeee----EcCCC-ccccCc----------------eecCCceEEEECcHHHHHHHHHHHHHHHHHH-------HHcCC
Confidence 11110 11110 000000 0111111123346788888888999898888 88999
Q ss_pred CCCcccccc--eeecCCCChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCC---CCCEEEEE
Q 010144 385 GLNLKAGIE--HFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLK---KGDRILMI 459 (517)
Q Consensus 385 ~~d~~~did--~~~~Hq~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~---~Gd~Vlli 459 (517)
.+ +|+| +|++||+|+++++.++++||+++|++.+|++++++||||||||+|+.|++++++++++ +||+++++
T Consensus 297 ~~---~did~~~~v~Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~~~~~~~~~~~~gd~~ll~ 373 (391)
T PLN03169 297 VE---KDYNDLFWAVHPGGPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYMREELKKKGEEDEEWGLIL 373 (391)
T ss_pred CC---CCCCcceEEecCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHHHHhhcccCCCCCcEEEEE
Confidence 85 7788 9999999999999999999999999988889999999999999999999999888776 69999999
Q ss_pred EechhHHhheeeeEEe
Q 010144 460 SLGAGFKCNNCVWEVM 475 (517)
Q Consensus 460 afG~G~t~~a~vlr~~ 475 (517)
+||+|++|+++++||.
T Consensus 374 afG~G~s~~~~ll~~~ 389 (391)
T PLN03169 374 AFGPGITFEGILARNL 389 (391)
T ss_pred EEcccHhHHHHHHhhh
Confidence 9999999999999984
|
|
| >PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-50 Score=413.77 Aligned_cols=323 Identities=16% Similarity=0.221 Sum_probs=264.7
Q ss_pred ceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhhHHH
Q 010144 84 CCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDE 163 (517)
Q Consensus 84 ~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~ea~~ 163 (517)
+++|.++|+|+|++ +++++++.+..+. ++ +++.+++||++|++..++ ++.++
T Consensus 3 ~~~I~~~g~~lP~~---~v~~~~~~~~~~~----~~------~~i~~~~Gi~~r~~~~~~-----e~~~~---------- 54 (326)
T PRK05963 3 SSRIAGFGHAVPDR---RVENAEIEAQLGL----ET------GWIERRTGIRCRRWAAPD-----ETLSD---------- 54 (326)
T ss_pred ccEEEEEEEECCCC---eecHHHHHHHcCC----CH------HHhhhccCCeEEEEcCCC-----CCHHH----------
Confidence 58999999999999 9999999987643 22 257889999999997653 44444
Q ss_pred HHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCC
Q 010144 164 IIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKN 242 (517)
Q Consensus 164 la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~ 242 (517)
|+++|+++||+++|++|+|||+||+++ ++++..|+.+++|+++||++ ++.+||+++ +|+|++.||++|.++++++ .
T Consensus 55 la~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~~p~~a~~v~~~Lg~~-~~~~~di~~-~C~g~~~aL~~A~~~l~~~-~ 131 (326)
T PRK05963 55 LAASAGDMALSDAGIERSDIALTLLATSTPDHLLPPSAPLLAHRLGLQ-NSGAIDLAG-ACAGFLYALVLADGFVRAQ-G 131 (326)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCcHHHHHHHHhCCC-CCceeeccc-hhhHHHHHHHHHHHHHHcC-C
Confidence 479999999999999999999999974 67889999999999999997 689999998 9999999999999999987 4
Q ss_pred CEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccccceeeccccCCC
Q 010144 243 KLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGH 322 (517)
Q Consensus 243 ~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~~~~~~~~g~ 322 (517)
++||||++|..+. +.++.++.. ..+|||||+|+||+++++.. .+++.+...++++.++.+..+.++...
T Consensus 132 ~~aLVv~~d~~s~-~~~~~~~~~---~~lfGDgA~A~ll~~~~~~~-------~~~l~~~~~t~~~~~~~~~~~~gg~~~ 200 (326)
T PRK05963 132 KPVLVVAANILSR-RINMAERAS---AVLFADAAGAVVLAPSAKAN-------SGVLGSQLISDGSHYDLIKIPAGGSAR 200 (326)
T ss_pred CeEEEEEechhhc-cCCccccCc---eEEEeecceEEEEEecCCCC-------CceEEEEEEEcCCCCCeEEeCCCCcCC
Confidence 8999999999887 345455543 68999999999999866431 134566677888777766655432211
Q ss_pred CCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCCh
Q 010144 323 PGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGR 402 (517)
Q Consensus 323 ~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~ 402 (517)
+.+.+.. .+ ...+. ..++.+++.+....+++.+.++| +++|+++ +|||+|++||+|+
T Consensus 201 ---~~~~~~~---~~--~~~~~-----~~~~~~~~~~~~~~~~~~~~~~L-------~~~gl~~---~did~~~~h~~~~ 257 (326)
T PRK05963 201 ---PFAPERD---AS--EFLMT-----MQDGRAVFTEAVRMMSGASQNVL-------ASAAMTP---QDIDRFFPHQANA 257 (326)
T ss_pred ---CCccccc---cc--ccceE-----ecCCHHHHHHHHHHHHHHHHHHH-------HHcCCCH---HHCCEEEeCCCCH
Confidence 1111100 00 00010 12346778888888889898888 8999996 8999999999999
Q ss_pred HHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEEEechhHHhheeeeEE
Q 010144 403 AVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEV 474 (517)
Q Consensus 403 ~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~VlliafG~G~t~~a~vlr~ 474 (517)
++++.+.++||++++++ ..++++||||+|||+|++|+++++++++++||+|++++||+|++|+++++||
T Consensus 258 ~~~~~~~~~l~l~~~k~---~~~l~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~G~~~~~~ll~~ 326 (326)
T PRK05963 258 RIVDKVCETIGIPRAKA---ASTLETYGNSSAATIPLSLSLANLEQPLREGERLLFAAAGAGMTGGAVVMRV 326 (326)
T ss_pred HHHHHHHHHcCCCHHHh---hhhHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEehhhhheeeEEeC
Confidence 99999999999999998 6899999999999999999999999999999999999999999999999986
|
|
| >PLN03168 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-49 Score=418.90 Aligned_cols=352 Identities=15% Similarity=0.196 Sum_probs=260.8
Q ss_pred CCceEEEEEEEEeCCCCCceecHHHHHHHHHhccc--CChHHHHHHHHHHHHhCCceeEeccCC-CcC-CC-------CC
Q 010144 82 GQCCYMLAYECYKPCDETRRLDTESCARVVWRNKK--LGLEEYRFLLKNMVSSGIGEETYGPRN-VVE-GR-------EE 150 (517)
Q Consensus 82 ~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~--~~~~~~~~~~ri~~~sGI~~r~~~~~~-~~~-~~-------~~ 150 (517)
..+++|.++|+..|++ .++++++.+.+..... ..+...+.+++|++++||++||..-+. ... .+ |+
T Consensus 13 ~~~~~i~~i~ta~P~~---~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~ps 89 (389)
T PLN03168 13 EGPACVLGIGTAVPPA---EFLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHMFLTEEVLKANPGICTYMEPS 89 (389)
T ss_pred CCCeEEEEEeccCCCc---ccCHHHHHHHHHHhccccCcHHHHHHHHHHHHhcCCCeeeeeccccchhhCcccccccCCC
Confidence 3679999999999999 9999999998866432 123334447789999999999874421 111 00 11
Q ss_pred -CccHHHhHhhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCe-eEEEecCCcchHHHH
Q 010144 151 -SPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDI-KAFNLSGMGCSASVV 228 (517)
Q Consensus 151 -~~~m~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~-~~~dl~~mgCsggl~ 228 (517)
...+..+.+++.+|+.+|+++||+++|++++|||+||++|+..+..|+++++|+++||+++.+ .++|++ +||+||++
T Consensus 90 ~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~-~gC~g~~~ 168 (389)
T PLN03168 90 LNVRHDIVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVKRVMMYQ-TGCFGGAS 168 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcceeeeeeC-CccHHHHH
Confidence 123567889999999999999999999999999999998654466999999999999998665 378888 59999999
Q ss_pred HHHHHHHHHHcCCCCEEEEEEecCCCCCCCCCCC--ccccccccccccceEEEEEeeccccc-ccchhhccceeeeeec-
Q 010144 229 AVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGRE--KSMMLSNILFRSGGCSMLLTNNRALK-HKAILKLNCLVRTHFG- 304 (517)
Q Consensus 229 AL~lA~~lL~ag~~~~aLVVs~E~~s~~~~~~~d--r~~lv~~~lfGDGAAAvLLs~~~~~~-~~~~~~l~~i~~t~~~- 304 (517)
||++|++++++++.++||||++|.+|.+|.+..+ .+.++++++|||||+|+||++++... .+..+++.....+...
T Consensus 169 aL~~A~~~i~~~~~~~VLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvvl~~~~~~~~~~~~~~~~~~~~~~~p~ 248 (389)
T PLN03168 169 VLRVAKDLAENNKGARVLAVASEVTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPKPEVEKALFEVHWAGETILPE 248 (389)
T ss_pred HHHHHHHHHHhCCCCEEEEEEEehhhhhccCcccccHHHHhccccccCccEEEEEecCCCCccCCcceEEEeeeeEEEcC
Confidence 9999999999999999999999999986543222 34456789999999999999864321 1112222111111111
Q ss_pred cCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCC
Q 010144 305 SNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGA 384 (517)
Q Consensus 305 td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~ 384 (517)
+++. +-+.-+..| ..+.+++++| ......+...+.+++ +..+.
T Consensus 249 s~~~----~~~~~~~~g-~~~~l~~~vp-------------------------~~i~~~~~~~l~~~l-------~~~~~ 291 (389)
T PLN03168 249 SDGA----IDGHLTEAG-LIFHLMKDVP-------------------------GLISKNIEKFLNEAR-------KCVGS 291 (389)
T ss_pred CCCc----cCceEecCc-eEEEECHHHH-------------------------HHHHHHHHHHHHHHH-------HhcCC
Confidence 1111 000000011 1122233333 333334455555555 45566
Q ss_pred CCCcccccceeecCCCChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCC--------CEE
Q 010144 385 GLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKG--------DRI 456 (517)
Q Consensus 385 ~~d~~~did~~~~Hq~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~G--------d~V 456 (517)
.. .|+++|++||+|++|++.++++||+++|++..|+.++++||||||||+|+.|+++.++ ++++| |++
T Consensus 292 ~~---~d~~~~v~Hqgg~~Il~~v~~~Lgl~~ek~~~s~~vl~~yGNtSSaSv~~vL~~~~~~-~~~~g~~~~~~g~~~~ 367 (389)
T PLN03168 292 PD---WNEMFWAVHPGGPAILDQVEAKLKLTKDKMQGSRDILSEFGNMSSASVLFVLDQIRQR-SVKMGASTLGEGSEFG 367 (389)
T ss_pred Cc---cccceEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHhhhHHHHHHHHHHH-HhhcCCCCCCCCccEE
Confidence 53 6778999999999999999999999999999889999999999999999999998865 55554 899
Q ss_pred EEEEechhHHhheeeeEEeccC
Q 010144 457 LMISLGAGFKCNNCVWEVMKDL 478 (517)
Q Consensus 457 lliafG~G~t~~a~vlr~~~~~ 478 (517)
+++|||+|++|+++++||..++
T Consensus 368 ll~afGpG~t~~~~llr~~~~~ 389 (389)
T PLN03168 368 FFIGFGPGLTLEVLVLRAAANV 389 (389)
T ss_pred EEEEEcchhhhhhhhheecccC
Confidence 9999999999999999997653
|
|
| >PLN03173 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-49 Score=417.93 Aligned_cols=350 Identities=18% Similarity=0.211 Sum_probs=266.3
Q ss_pred CceEEEEEEEEeCCCCCceecHHHHHHHHHhccc--CChHHHHHHHHHHHHhCCceeEeccCCC---cC---CC---CC-
Q 010144 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNKK--LGLEEYRFLLKNMVSSGIGEETYGPRNV---VE---GR---EE- 150 (517)
Q Consensus 83 ~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~--~~~~~~~~~~ri~~~sGI~~r~~~~~~~---~~---~~---~~- 150 (517)
.+++|.++|+..|++ .++++++.+.+....+ ..+...+.+++|++++||++||.+-+.. .. .+ |+
T Consensus 15 ~~~~i~~i~ta~P~~---~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~ 91 (391)
T PLN03173 15 GPATIMAIGTSTPPN---CVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVCEYMAPSL 91 (391)
T ss_pred CCeEEEEEEccCCCc---ccCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCeeeEeccchhhhhCcccccccCCCH
Confidence 568999999999999 9999999998866431 1233344477899999999998754211 00 01 11
Q ss_pred CccHHHhHhhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHH
Q 010144 151 SPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAV 230 (517)
Q Consensus 151 ~~~m~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL 230 (517)
...+..+.+++.+|+.+|+++||+++|++|+|||+||++++.....|+++.+|+++||+++++..+.+.++||+|++.||
T Consensus 92 ~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL 171 (391)
T PLN03173 92 DARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRFMMYQQGCFAGGTVL 171 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhCCCccceeeehhcCccHHHHHHH
Confidence 12356688999999999999999999999999999998764444589999999999999977755544446999999999
Q ss_pred HHHHHHHHcCCCCEEEEEEecCCCCCCCCCCC--ccccccccccccceEEEEEeeccccc-ccchhhccceeeee-eccC
Q 010144 231 DLVQQLFRTYKNKLAIVVSTESMGPNWYCGRE--KSMMLSNILFRSGGCSMLLTNNRALK-HKAILKLNCLVRTH-FGSN 306 (517)
Q Consensus 231 ~lA~~lL~ag~~~~aLVVs~E~~s~~~~~~~d--r~~lv~~~lfGDGAAAvLLs~~~~~~-~~~~~~l~~i~~t~-~~td 306 (517)
++|++++++++.++||||++|.+|.+|+++.| .++++++++|||||+|+||++.+... .++.|++.+..... ..++
T Consensus 172 ~~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvvl~~~~~~~~~~~~~~l~~~~~~~~~~t~ 251 (391)
T PLN03173 172 RLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPVLGVEKPLFELVSAAQTILPDSD 251 (391)
T ss_pred HHHHHHHHhCCCCeEEEEEEehhhhhhCCccccchhhhhhhhhhcCceEEEEEeCCCCCCcCCcceEEEeeeeEEecCCc
Confidence 99999999999999999999999975655554 34566789999999999999754321 11234443322211 2344
Q ss_pred cccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCC
Q 010144 307 DEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGL 386 (517)
Q Consensus 307 ~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~ 386 (517)
+.....+. . .| ..+.++++ +++++...++..+.++| ++.|+.+
T Consensus 252 ~~~~~~i~-~---~G-~~~~l~~~-------------------------vp~~~~~~~~~~i~~~L-------~~~gl~~ 294 (391)
T PLN03173 252 GAIDGHLR-E---VG-LTFHLLKD-------------------------VPGLISKNVEKSLTEAF-------KPLGISD 294 (391)
T ss_pred cceeeEEE-c---Cc-eEEEEecH-------------------------HHHHHHHHHHHHHHHHH-------HhcCCCc
Confidence 32211111 1 11 12223333 44444555667777777 7888885
Q ss_pred CcccccceeecCCCChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHc----CCCCCC---CEEEEE
Q 010144 387 NLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAK----KRLKKG---DRILMI 459 (517)
Q Consensus 387 d~~~did~~~~Hq~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~----g~i~~G---d~Vlli 459 (517)
+|||+|++||+|+++++.+++.||++++++.+|++++++||||||||+|+.|++++++ |.+++| ++++++
T Consensus 295 ---~di~~~v~Hqgg~~Il~~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~~~~~~g~~~~~~l~~ 371 (391)
T PLN03173 295 ---WNSLFWIAHPGGPAILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLKSTGEGLEWGVLF 371 (391)
T ss_pred ---cccCeEEECCCcHHHHHHHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHHHHHHhhhhcCCCCCCCCcceEEEE
Confidence 8999999999999999999999999999999999999999999999999999999853 443333 889999
Q ss_pred EechhHHhheeeeEEe
Q 010144 460 SLGAGFKCNNCVWEVM 475 (517)
Q Consensus 460 afG~G~t~~a~vlr~~ 475 (517)
|||+|++++++++||.
T Consensus 372 afGpG~t~e~~ll~~~ 387 (391)
T PLN03173 372 GFGPGLTVETVVLHSV 387 (391)
T ss_pred EeCchHHHHHHHHhhc
Confidence 9999999999999984
|
|
| >PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-49 Score=413.82 Aligned_cols=334 Identities=15% Similarity=0.191 Sum_probs=264.3
Q ss_pred CCceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhhH
Q 010144 82 GQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEM 161 (517)
Q Consensus 82 ~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~ea 161 (517)
+++++|+++|+|+|++ +++++++.+.++. ++ .+|.+++||++|+++.++ ++.
T Consensus 45 ~~~~~I~g~g~~lP~~---~v~n~el~~~~~~----~~------~~i~~~tGi~~R~~~~~~-----~~~---------- 96 (379)
T PLN02326 45 GSGSKLVGCGSAVPKL---LITNDDLSKLVDT----SD------EWIATRTGIRNRRVLSGD-----ETL---------- 96 (379)
T ss_pred cCCcEEEEEEEECCCc---eecHHHHHHhcCC----ch------hheecccCcceEeecCCC-----CCH----------
Confidence 4578999999999999 9999999987652 22 257899999999987553 332
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCC
Q 010144 162 DEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYK 241 (517)
Q Consensus 162 ~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~ 241 (517)
.+|+.+|+++||+++|++|+|||+||++++.....++.+..|+++||++ +++++|+++ ||+|++.||++|.+++++++
T Consensus 97 ~~La~~Aa~~aL~~agi~~~dId~li~~s~~~~~~~~~a~~v~~~LG~~-~~~~~dv~~-~Ca~~~~aL~~A~~~l~~g~ 174 (379)
T PLN02326 97 TSLAVEAAKKALEMAGVDPEDVDLVLLCTSSPDDLFGSAPQVQAALGCT-NALAFDLTA-ACSGFVLGLVTAARFIRGGG 174 (379)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCccCcHHHHHHHHhCCC-CCceeeccc-cchHHHHHHHHHHHHHHcCC
Confidence 4568999999999999999999999998653323456789999999998 799999996 99999999999999999999
Q ss_pred CCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccccceeeccccCC
Q 010144 242 NKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQG 321 (517)
Q Consensus 242 ~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~~~~~~~~g 321 (517)
.+++|||++|.++. +.++.|+.. ..+|||||+|+||+++++... .+..+.+.+++..++.+..+..+..
T Consensus 175 ~~~vLVv~~e~~s~-~~~~~d~~~---~~lfGDGAaAvlL~~~~~~~~-------~i~~~~~~t~g~~~~~~~~~~~g~~ 243 (379)
T PLN02326 175 YKNVLVIGADALSR-YVDWTDRGT---CILFGDGAGAVVLQACDDDED-------GLLGFDMHSDGNGHKHLHATFKGED 243 (379)
T ss_pred CCEEEEEEechhcC-CCCccccCc---eEEEcceeEEEEEEEcCCCCC-------ceEEEEEEEcCCCCCeEEecCCCCc
Confidence 99999999999987 455566654 569999999999998764311 2345566777766655543321110
Q ss_pred CCC-cccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCC
Q 010144 322 HPG-FRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPG 400 (517)
Q Consensus 322 ~~g-~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~ 400 (517)
..+ ..-..+..+.... + .....+.|.+.++|+++...+++.+.++| +++|+++ +|||+|++||+
T Consensus 244 ~~~~~~~~~~~~~~~~~--~---~~~~~~~~~g~~v~~~~~~~~~~~i~~~L-------~~~gl~~---~dId~~v~Hq~ 308 (379)
T PLN02326 244 DDSSGGNTNGVGDFPPK--K---ASYSCIQMNGKEVFKFAVRCVPQVIESAL-------QKAGLTA---ESIDWLLLHQA 308 (379)
T ss_pred ccccccccccccccccc--c---ccccceEecCHHHHHHHHHHHHHHHHHHH-------HHcCCCH---HHCCEEEECCC
Confidence 000 0000000000000 0 00112346678899999999999999988 7899996 89999999999
Q ss_pred ChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEEEechhHHhheeeeEE
Q 010144 401 GRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEV 474 (517)
Q Consensus 401 ~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~VlliafG~G~t~~a~vlr~ 474 (517)
|+++++.+++.||+++|++ ..++++||||+|||+|++|++++++|++++||+|++++||+|++|++++++|
T Consensus 309 n~~~~~~~~~~Lgl~~ek~---~~~l~~~GNt~sAsi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~ll~~ 379 (379)
T PLN02326 309 NQRIIDAVAQRLGIPPEKV---ISNLANYGNTSAASIPLALDEAVRSGKVKKGDVIATAGFGAGLTWGSAIVRW 379 (379)
T ss_pred CHHHHHHHHHHcCCCHHHe---eecHhhcCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEChhheeeEEEEEC
Confidence 9999999999999999999 5789999999999999999999999999999999999999999999999986
|
|
| >PLN03170 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-48 Score=413.66 Aligned_cols=351 Identities=16% Similarity=0.203 Sum_probs=266.5
Q ss_pred CceEEEEEEEEeCCCCCceecHHHHHHHHHhcccC-C-hHHHHHHHHHHHHhCCceeEeccCC-CcC-CC-------CC-
Q 010144 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNKKL-G-LEEYRFLLKNMVSSGIGEETYGPRN-VVE-GR-------EE- 150 (517)
Q Consensus 83 ~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~-~-~~~~~~~~ri~~~sGI~~r~~~~~~-~~~-~~-------~~- 150 (517)
.+.+|.++|+..|++ .++++++.+.+....+. + +...+.+++|++++||++||...+. ... .+ |+
T Consensus 19 ~~~~i~~i~ta~P~~---~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~ 95 (401)
T PLN03170 19 GPATVLAIGTATPAN---CVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSL 95 (401)
T ss_pred CCeEEEEEeecCCCc---cccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccCCCCH
Confidence 568999999999999 99999999988764311 1 2233447789999999999875421 111 00 11
Q ss_pred CccHHHhHhhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCe-eEEEecCCcchHHHHH
Q 010144 151 SPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDI-KAFNLSGMGCSASVVA 229 (517)
Q Consensus 151 ~~~m~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~-~~~dl~~mgCsggl~A 229 (517)
...+..+.+++.+|+++|+++||+++|++++|||+||++|+.....|+++++|+++||+++.+ .++|++ +||+|++.|
T Consensus 96 ~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~-~gC~G~~~a 174 (401)
T PLN03170 96 DARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQ-QGCFAGGTV 174 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCcCcccHHHHhhc-ChhHHHHHH
Confidence 123566889999999999999999999999999999987654455999999999999999665 378998 599999999
Q ss_pred HHHHHHHHHcCCCCEEEEEEecCCCCCCCCCCC--ccccccccccccceEEEEEeeccccc-ccchhhccceeeeeeccC
Q 010144 230 VDLVQQLFRTYKNKLAIVVSTESMGPNWYCGRE--KSMMLSNILFRSGGCSMLLTNNRALK-HKAILKLNCLVRTHFGSN 306 (517)
Q Consensus 230 L~lA~~lL~ag~~~~aLVVs~E~~s~~~~~~~d--r~~lv~~~lfGDGAAAvLLs~~~~~~-~~~~~~l~~i~~t~~~td 306 (517)
|++|++++++++.++||||++|.+|.++.++.+ .+.+++.++|||||+|+||+++++.. .++.|++... .+.+..+
T Consensus 175 L~~A~~l~~~~~~~~vLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvVl~~~~~~~~~~~~~~l~~~-~~~~~p~ 253 (401)
T PLN03170 175 LRVAKDLAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERVERPLFQLVSA-SQTILPD 253 (401)
T ss_pred HHHHHHHHHcCCCCeEEEEEEehhhhccCCcccchhhhhhhhhhhhceeEEEEEecCCcccccCCceEEeec-cceEecC
Confidence 999999999999999999999999986533332 23456688999999999999865421 0112332211 1111111
Q ss_pred cccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCC
Q 010144 307 DEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGL 386 (517)
Q Consensus 307 ~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~ 386 (517)
++. .+.+.-...| ..+.++ .+++.++.+.+++.+.++| ++.|+.+
T Consensus 254 ~~~--~~~~~i~~~G-~~~~l~-------------------------~~vp~~~~~~i~~~v~~~L-------~~~gl~~ 298 (401)
T PLN03170 254 SEG--AIDGHLREVG-LTFHLL-------------------------KDVPGLISKNIERSLEEAF-------KPLGITD 298 (401)
T ss_pred Ccc--cccceEEcCC-eEEEEe-------------------------hHHHHHHHHHHHHHHHHHH-------HhcCCCc
Confidence 110 0000000001 011222 3455555566777777777 7888885
Q ss_pred CcccccceeecCCCChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHH----HcCCCCCC---CEEEEE
Q 010144 387 NLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYME----AKKRLKKG---DRILMI 459 (517)
Q Consensus 387 d~~~did~~~~Hq~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~----~~g~i~~G---d~Vlli 459 (517)
+|+++|++||+|+++++.+++.||++++++.+|++++++||||||+|+++.|+++. ++|++++| |+++++
T Consensus 299 ---~di~~~v~Hqgg~~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~ 375 (401)
T PLN03170 299 ---YNSIFWVAHPGGPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLF 375 (401)
T ss_pred ---cccCeEEecCCcHHHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHHHHhHhhcCCCCCCCCccEEEEE
Confidence 88999999999999999999999999999988899999999999999999999987 46888888 899999
Q ss_pred EechhHHhheeeeEEec
Q 010144 460 SLGAGFKCNNCVWEVMK 476 (517)
Q Consensus 460 afG~G~t~~a~vlr~~~ 476 (517)
+||+|++|+++++||..
T Consensus 376 afGpG~t~~~~ll~~~~ 392 (401)
T PLN03170 376 GFGPGLTVETVVLHSVP 392 (401)
T ss_pred EeCchHhHHhHHheecc
Confidence 99999999999999943
|
|
| >PLN03171 chalcone synthase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-48 Score=409.49 Aligned_cols=355 Identities=16% Similarity=0.215 Sum_probs=257.6
Q ss_pred CCceEEEEEEEEeCCCCCceecHHHHHHHHHhc---ccCChHHHHHHHHHHHHhCCceeEeccCCC-cC--------CCC
Q 010144 82 GQCCYMLAYECYKPCDETRRLDTESCARVVWRN---KKLGLEEYRFLLKNMVSSGIGEETYGPRNV-VE--------GRE 149 (517)
Q Consensus 82 ~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~---~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~-~~--------~~~ 149 (517)
..+++|.++|+|+|++ +++|+++.+.+... ... ++..+.+++|++++||++||++.++. .. ..|
T Consensus 20 ~~~~~I~gigt~~P~~---~v~n~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~ 95 (399)
T PLN03171 20 DGLAAVLAIGTANPAN---CVPQDEFPDFYFRATKSDHL-TALKDKFKRICQELGVQKRYLHHTEELLSAHPEFLDHDAP 95 (399)
T ss_pred CCCcEEEEEEeeCCCc---ccCHHHHHHHHHHHhccccc-HHHHHHHHHHHHhcCCCceeEeccccccccCccccccCCC
Confidence 3669999999999999 99999999885331 111 12233467899999999999976531 00 011
Q ss_pred C-CccHHHhHhhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCee-EEEecCCcchHHH
Q 010144 150 E-SPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIK-AFNLSGMGCSASV 227 (517)
Q Consensus 150 ~-~~~m~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~-~~dl~~mgCsggl 227 (517)
+ ...+..+.+.+.+|+++|+++||+++|++|+|||+||++|+.....|+++++|+++||+++.+. .+++.+ ||+|++
T Consensus 96 ~~~~r~~~~~~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~~-gC~g~~ 174 (399)
T PLN03171 96 SLDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRRTMLHLN-GCFAGA 174 (399)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHhCCCcccceeeccCC-ccHHHH
Confidence 1 1235668899999999999999999999999999999975433348999999999999986543 567665 999999
Q ss_pred HHHHHHHHHHHcCCCCEEEEEEecCCCCCCCCCCCc---cccccccccccceEEEEEeecccccccchhhccceeeeeec
Q 010144 228 VAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGREK---SMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFG 304 (517)
Q Consensus 228 ~AL~lA~~lL~ag~~~~aLVVs~E~~s~~~~~~~dr---~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~ 304 (517)
+||++|.+++++++.++||||++|.+|.. +++.|+ +.++.+++|||||+|+||++.++...+..+++ ...+..
T Consensus 175 ~aL~~A~~li~~~~~~~vLVv~~e~~s~~-~~~~d~~~~~~~v~~~LFGDGAaA~vl~~~~~~~~~~~~~l---~~~~~~ 250 (399)
T PLN03171 175 AALRLAKDLAENNRGARVLVVAAEITLLL-FNGPDEGCFQTLLNQGLFGDGAAAVIVGADADAAERPLFEI---VSAAQA 250 (399)
T ss_pred HHHHHHHHHHHhCCCCeEEEEEEeccccc-cCCCCcccHHhhhccccccCccEEEEEecCCCCCCCCceEE---EEeeeE
Confidence 99999999999999999999999999984 343443 34556789999999999998654321223443 223332
Q ss_pred cCcccccceeeccccCCCCCcccc-hhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhC
Q 010144 305 SNDEAYECCMQVEDQQGHPGFRLT-KQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLG 383 (517)
Q Consensus 305 td~~~~~~~~~~~~~~g~~g~~ls-~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g 383 (517)
.++...+.+.+..+..+.. ..++ +.+|....+.+ .+.+.+.|... .....|
T Consensus 251 ~~p~~~~~~~~~~~~~g~~-~~~~~~~vp~~i~~~l-------------------------~~~l~~~l~~~--~~~~~g 302 (399)
T PLN03171 251 IIPESDDAINMHFTEGGLD-GNIGTRQVPGLIGDNI-------------------------ERCLLDAFAPL--LGGDGG 302 (399)
T ss_pred EecCCchheEEEEEcCCce-EEECchhHHHHHHHHH-------------------------HHHHHHHHHhh--cccccC
Confidence 3333333343311111111 1233 44554433222 11111111000 001245
Q ss_pred CCCCcccccceeecCCCChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCC--CCCC---CEEEE
Q 010144 384 AGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKR--LKKG---DRILM 458 (517)
Q Consensus 384 ~~~d~~~did~~~~Hq~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~--i~~G---d~Vll 458 (517)
+++ +|++++ +||+|+++++.++++||++++++..|+.++++||||+|||+|+.|++++++++ +++| |+|++
T Consensus 303 ~~~---~di~~~-~Hq~~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtssaSip~~L~~~~~~~~~~~~~G~~~d~vll 378 (399)
T PLN03171 303 AEW---NDLFWA-VHPGSSAILDQVDAALGLEPEKLAASRRVLSDYGNMFGATVIFALDELRRQMEEAAAAGAWPELGVM 378 (399)
T ss_pred CCc---ccceEE-EcCCcHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchhhhHHHHHHHHHhhHhhcCCCCCCcceEEE
Confidence 664 788766 69999999999999999999999888899999999999999999999988763 6788 99999
Q ss_pred EEechhHHhheeeeEEecc
Q 010144 459 ISLGAGFKCNNCVWEVMKD 477 (517)
Q Consensus 459 iafG~G~t~~a~vlr~~~~ 477 (517)
++||+|++|+++++++.+.
T Consensus 379 ~~fG~Glt~~~~ll~~~~~ 397 (399)
T PLN03171 379 MAFGPGLTVDAMLLHASGH 397 (399)
T ss_pred EEEcccHHHHHHHhhcccC
Confidence 9999999999999999664
|
|
| >CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-48 Score=400.08 Aligned_cols=323 Identities=15% Similarity=0.263 Sum_probs=260.1
Q ss_pred ceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhhHHH
Q 010144 84 CCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDE 163 (517)
Q Consensus 84 ~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~ea~~ 163 (517)
.|+|.++|.|+|++ +|+++|+.+.++. ++ .+|.+++||++|++..+. ++ ..+
T Consensus 2 ~v~I~~~g~~lP~~---~v~~~e~~~~~~~----~~------~~i~~~~gi~~r~~~~~~-----~~----------~~~ 53 (326)
T CHL00203 2 GVHILSTGSSVPNF---SVENQQFEDIIET----SD------HWISTRTGIKKRHLAPSS-----TS----------LTK 53 (326)
T ss_pred ccEEEEEEEECCCe---EEcHHHHHHhcCC----Ch------hhEeeccCeEEEEeCCCC-----CC----------HHH
Confidence 58999999999999 9999999988653 12 257789999999987653 32 245
Q ss_pred HHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCC
Q 010144 164 IIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKN 242 (517)
Q Consensus 164 la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~ 242 (517)
|+.+|+++||+++|++|+|||.||++| +++.. +..+..++++||++ ++.++++++ +|+|++.||++|.++|+++..
T Consensus 54 la~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~-~~~~~~v~~~Lg~~-~~~~~~v~~-~Casg~~al~~A~~~i~sg~~ 130 (326)
T CHL00203 54 LAAEAANKALDKAHMDPLEIDLIILATSTPDDL-FGSASQLQAEIGAT-RAVAFDITA-ACSGFILALVTATQFIQNGSY 130 (326)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CchHHHHHHHhCCC-CCceeeecc-cchhHHHHHHHHHHHHHcCCC
Confidence 689999999999999999999999976 45443 35578999999998 689999996 999999999999999999999
Q ss_pred CEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccccceeeccccCCC
Q 010144 243 KLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGH 322 (517)
Q Consensus 243 ~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~~~~~~~~g~ 322 (517)
+++|||++|.++. +.++.++.. ..+|||||+|+||++.+.. .++.....+|++.++.+.....+...
T Consensus 131 ~~~Lvv~~e~~s~-~~~~~~~~~---~~~fgDga~A~ll~~~~~~---------~~~~~~~~t~g~~~~~~~~~~~~~~~ 197 (326)
T CHL00203 131 KNILVVGADTLSK-WIDWSDRKT---CILFGDGAGAAIIGASYEN---------SILGFKLCTDGKLNSHLQLMNKPVNN 197 (326)
T ss_pred CEEEEEEehhhhC-cCCcccCCc---eEEEcceeeEEEEEEcCCC---------CeEEEEEEEcCCCcceEEecCCCCCc
Confidence 9999999999987 455555543 6899999999999986542 23445566777665544332111000
Q ss_pred CCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCCh
Q 010144 323 PGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGR 402 (517)
Q Consensus 323 ~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~ 402 (517)
..+.. ...|. .....+.+++.+++++....+++.+.++| ++.|+++ +|||||++||+|+
T Consensus 198 ~~~~~-~~~~~----------~~~~~~~~~g~~~~~~~~~~~~~~i~~~L-------~~~g~~~---~did~~~~hq~~~ 256 (326)
T CHL00203 198 QSFGT-TKLPQ----------GQYQSISMNGKEVYKFAVFQVPAVIIKCL-------NALNISI---DEVDWFILHQANK 256 (326)
T ss_pred ccccc-ccccc----------CCcceEEECCHHHHHHHHHHHHHHHHHHH-------HHcCCCH---HHCCEEEECCCCH
Confidence 00000 00000 00112345667888888888999999988 8999996 9999999999999
Q ss_pred HHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEEEechhHHhheeeeEE
Q 010144 403 AVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEV 474 (517)
Q Consensus 403 ~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~VlliafG~G~t~~a~vlr~ 474 (517)
++++.+++.||+|+|++ +.++++||||+|||+|++|++++++|++++||+|++++||+|++|+++++||
T Consensus 257 ~~~~~~~~~lgl~~~k~---~~~l~~~Gn~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~v~~~ 325 (326)
T CHL00203 257 RILEAIANRLSVPNSKM---ITNLEKYGNTSAASIPLALDEAIQNNKIQPGQIIVLSGFGAGLTWGAIVLKW 325 (326)
T ss_pred HHHHHHHHHhCCCHHHh---hhHHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEchhhhheEEEEEe
Confidence 99999999999999999 6799999999999999999999999999999999999999999999999998
|
|
| >PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-47 Score=396.31 Aligned_cols=326 Identities=15% Similarity=0.175 Sum_probs=262.7
Q ss_pred CCceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhhH
Q 010144 82 GQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEM 161 (517)
Q Consensus 82 ~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~ea 161 (517)
++.++|.++++|+|++ +++++++.+..+. .+ +++.+++||++|+++.+ ++.
T Consensus 2 ~~~~~I~~~g~~lP~~---~v~~~~~~~~~~~----~~------~~i~~~~Gi~~R~~~~~------~~~---------- 52 (329)
T PRK07204 2 KRYISIKGIGTYLPKR---KVDSLELDKKLDL----PE------GWVLKKSGVKTRHFVDG------ETS---------- 52 (329)
T ss_pred CCCcEEEEEEEeCCCc---eecHHHHHHhhCC----CH------hHhhhccCceEEeecCC------CCH----------
Confidence 4678999999999999 9999999987643 22 25788999999998762 322
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCC-CeeEEEecCCcchHHHHHHHHHHHHHHc
Q 010144 162 DEIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRN-DIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (517)
Q Consensus 162 ~~la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl~~-~~~~~dl~~mgCsggl~AL~lA~~lL~a 239 (517)
.+|+.+|+++||+++|++|+|||+||+++ ++++..|+++.+|+++||+++ .++++|+++ +|+|++.||++|.+++++
T Consensus 53 ~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~p~~a~~v~~~lgl~~~~~~~~~v~~-~C~~~~~al~~a~~~l~~ 131 (329)
T PRK07204 53 SYMGAEAAKKAVEDAKLTLDDIDCIICASGTIQQAIPCTASLIQEQLGLQHSGIPCFDINS-TCLSFITALDTISYAIEC 131 (329)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCccHHHHHHHHhCCCCCCceEEEccc-hhHHHHHHHHHHHHHHHC
Confidence 35589999999999999999999999875 567778999999999999985 479999996 999999999999999999
Q ss_pred CCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccccceeecccc
Q 010144 240 YKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQ 319 (517)
Q Consensus 240 g~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~~~~~~~ 319 (517)
++.++||||++|.++.. .+..++.. ..+|||||+|+||+++++.. +++.++..+++..++....+.++
T Consensus 132 g~~~~~Lvv~~e~~s~~-~~~~~~~~---~~lfGDGAaA~ll~~~~~~~--------~il~~~~~t~~~~~~~~~~~~~~ 199 (329)
T PRK07204 132 GRYKRVLIISSEISSVG-LNWGQNES---CILFGDGAAAVVITKGDHSS--------RILASHMETYSSGAHLSEIRGGG 199 (329)
T ss_pred CCCCEEEEEEeccccCC-CCcccCcc---eEEEecccEEEEEEEcCCCC--------cEEEEEEEEecCCCCceEEecCC
Confidence 99999999999998873 33344332 68999999999999865431 35556666666544433222211
Q ss_pred CCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCC
Q 010144 320 QGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHP 399 (517)
Q Consensus 320 ~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq 399 (517)
.. .+...+. ...... ..+.+++.++++++...+++.+.++| +++|+++ +|||+|++||
T Consensus 200 ~~---~~~~~~~--------~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~L-------~~~gl~~---~did~~~~H~ 257 (329)
T PRK07204 200 TM---IHPREYS--------EERKED-FLFDMNGRAIFKLSSKYLMKFIDKLL-------MDAGYTL---ADIDLIVPHQ 257 (329)
T ss_pred cC---CCCcccc--------cccccC-ceEEECCHHHHHHHHHHHHHHHHHHH-------HHcCCCH---HHCCEEEeCC
Confidence 10 0000000 000000 01245567888888888999999988 8999996 9999999999
Q ss_pred CChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEEEechhHHhheeeeEE
Q 010144 400 GGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEV 474 (517)
Q Consensus 400 ~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~VlliafG~G~t~~a~vlr~ 474 (517)
+|.++++.+++.||+++|++ ..++++||||+|||+|++|++++++|++++||+|++++||+|++|+++++|+
T Consensus 258 ~~~~~~~~i~~~l~l~~e~~---~~~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~ll~~ 329 (329)
T PRK07204 258 ASGPAMRLIRKKLGVDEERF---VTIFEDHGNMIAASIPVALFEAIKQKKVQRGNKILLLGTSAGLSIGGILLEY 329 (329)
T ss_pred CCHHHHHHHHHHcCCCHHHh---hhhHhhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhheeeEEeC
Confidence 99999999999999999998 6899999999999999999999999999999999999999999999999985
|
|
| >PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-47 Score=393.00 Aligned_cols=322 Identities=16% Similarity=0.235 Sum_probs=265.6
Q ss_pred CCceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhhH
Q 010144 82 GQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEM 161 (517)
Q Consensus 82 ~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~ea 161 (517)
+++++|.++|+|+|++ +++++|+.+..+. +++ ++.+++||++|++..++ ++ +
T Consensus 2 ~~~~~I~~ig~~~P~~---~v~~~e~~~~~~~----~~~------~i~~~~Gi~~r~~~~~~-----~~----------~ 53 (325)
T PRK12879 2 MSYARITGIGTYVPPR---VLTNDDLETFIDT----SDE------WIVQRTGIKERRIAHVE-----EY----------T 53 (325)
T ss_pred CCCCEEEEEEEECCCc---EEcHHHHHHhcCC----CHH------HhhhccCceEEEECCCC-----CC----------H
Confidence 3579999999999999 9999999987642 222 57889999999987653 32 2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcC
Q 010144 162 DEIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTY 240 (517)
Q Consensus 162 ~~la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag 240 (517)
.+|+.+|+++||+++|++|+|||.||+++ ++++..|+.+.+|+++||++ +++++++++ ||+|++.||++|.++|++|
T Consensus 54 ~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~-~~~~~~v~~-~C~~~~~al~~A~~~l~~g 131 (325)
T PRK12879 54 SDLAIKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIP-NAAAFDINA-ACAGFLYGLETANGLITSG 131 (325)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCC-CCcEEEECc-cchHHHHHHHHHHHHHHcC
Confidence 45689999999999999999999999875 56788999999999999997 589999996 9999999999999999999
Q ss_pred CCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccccceeeccccC
Q 010144 241 KNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQ 320 (517)
Q Consensus 241 ~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~~~~~~~~ 320 (517)
+.++||||++|.++. +.+..++.. ..+|||||+|+||++++... ++..+...++++.++.++.+..+.
T Consensus 132 ~~~~~Lvv~~e~~s~-~~~~~~~~~---~~~~GDgAaA~ll~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 199 (325)
T PRK12879 132 LYKKVLVIGAERLSK-VTDYTDRTT---CILFGDGAGAVVLEATENEP--------GFIDYVLGTDGDGGDILYRTGLGT 199 (325)
T ss_pred CCCEEEEEEehhhcC-cCCccccCc---eEEEeecceEEEEEecCCCC--------CeEEEEEEEcCCCCCeEEEcCCCC
Confidence 999999999999887 334445543 57999999999999876531 345566777777666665443211
Q ss_pred CCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCC
Q 010144 321 GHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPG 400 (517)
Q Consensus 321 g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~ 400 (517)
. ...+. . .....+.+++.+++.+..+.+++.+.++| +++|+.+ +|||+|++||+
T Consensus 200 ~-----~~~~~-----~------~~~~~~~~~~~~~~~~~~~~~~~~i~~~L-------~~~g~~~---~did~~~~h~~ 253 (325)
T PRK12879 200 T-----MDRDA-----L------SGDGYIVQNGREVFKWAVRTMPKGARQVL-------EKAGLTK---DDIDWVIPHQA 253 (325)
T ss_pred C-----CCccc-----c------ccCccEEEcCHHHHHHHHHHHHHHHHHHH-------HHcCCCH---HHCCEEEECCC
Confidence 1 11000 0 01112344557888888888888999888 7899996 89999999999
Q ss_pred ChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEEEechhHHhheeeeEE
Q 010144 401 GRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEV 474 (517)
Q Consensus 401 ~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~VlliafG~G~t~~a~vlr~ 474 (517)
|+++++.+++.||++++++ ..++++|||++|||+|++|++++++|++++||+|++++||+|++|+++++||
T Consensus 254 ~~~~~~~~~~~lg~~~~~~---~~~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~l~~~ 324 (325)
T PRK12879 254 NLRIIESLCEKLGIPMEKT---LVSVEYYGNTSAATIPLALDLALEQGKIKPGDTLLLYGFGAGLTWAALLVKW 324 (325)
T ss_pred CHHHHHHHHHHcCCCHHHh---hhhHhhhCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhEEEEEEe
Confidence 9999999999999999998 4589999999999999999999999999999999999999999999999998
|
|
| >COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-47 Score=373.10 Aligned_cols=345 Identities=20% Similarity=0.239 Sum_probs=276.9
Q ss_pred eEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHH-HhCCceeEeccCCCcCCCCCC--ccHHHhHhhH
Q 010144 85 CYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMV-SSGIGEETYGPRNVVEGREES--PSLAEAFSEM 161 (517)
Q Consensus 85 v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~-~sGI~~r~~~~~~~~~~~~~~--~~m~~~~~ea 161 (517)
.+|.++++++|++ .++|.|+.+.+..... .+ ..|-+.|.+. +.+|++|+.+.|..++..++. ..+.-+.|+|
T Consensus 2 a~i~sv~t~~Ppy---~~~Qse~~d~f~~~~~-~~-~~~~I~r~l~~~~~i~~R~~v~Pl~~y~e~~~f~ekN~ifie~a 76 (356)
T COG3424 2 AVIASVATALPPY---RYNQSEITDSFAELPF-QE-GREDIPRVLHANAQINRRHLVLPLDWYREPHGFGEKNEIFIEEA 76 (356)
T ss_pred ceeeecccCCCcc---ccchHHHHHHHHHhcc-cc-chHHHHHHHhhccccccceecccHhhccCCCChhhhhhhHHHHH
Confidence 4799999999999 9999888887765432 22 2444556666 678888887766555433221 1244588999
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCC
Q 010144 162 DEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYK 241 (517)
Q Consensus 162 ~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~ 241 (517)
.+++++|+++||+.+++.|+|||+|+++++++..+||+.++|.++||+++++..+.+.+|||+++..||..|+++++++|
T Consensus 77 ~~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~ra~P 156 (356)
T COG3424 77 VPLGVDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAP 156 (356)
T ss_pred HHHHHHHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHHHHHhhCc
Confidence 99999999999999999999999999998888899999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEEecCCCCCCCCCCC-ccccccccccccceEEEEEeecccccc--cchhhccceeeeeeccCcccccceeeccc
Q 010144 242 NKLAIVVSTESMGPNWYCGRE-KSMMLSNILFRSGGCSMLLTNNRALKH--KAILKLNCLVRTHFGSNDEAYECCMQVED 318 (517)
Q Consensus 242 ~~~aLVVs~E~~s~~~~~~~d-r~~lv~~~lfGDGAAAvLLs~~~~~~~--~~~~~l~~i~~t~~~td~~~~~~~~~~~~ 318 (517)
..+|||||.|.||.++....+ ++.++...+||||+||+|++.+..... ..+..+.+- .++...|++ +.|-|..
T Consensus 157 ~~~vlvV~vELCSLt~~~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s-~StL~~dse--~~Mgwdv- 232 (356)
T COG3424 157 DANVLVVCVELCSLTYVFADDTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDS-FSTLYPDSE--DIMGWDV- 232 (356)
T ss_pred cceEEEEEeeeeeeeeecCCCCcccceeeeeecCCeeEEEEeccccccccCCCCceeccc-ccccCCccc--cccceee-
Confidence 999999999999998665544 457899999999999999998654221 112211111 122223322 2232332
Q ss_pred cCCCCCc--ccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceee
Q 010144 319 QQGHPGF--RLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFC 396 (517)
Q Consensus 319 ~~g~~g~--~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~ 396 (517)
+..|+ .+|+|+|......++.+++ .+| +..|+. .+||++|+
T Consensus 233 --~d~G~~~vlSrdlp~lIe~~l~~~V~-------------------------~fL-------~~~~ls---~~dI~~w~ 275 (356)
T COG3424 233 --GDQGLKVVLSRDLPNLIESYLAPNVT-------------------------TFL-------ATHGLS---IEDIEAWV 275 (356)
T ss_pred --cCCcEEEEEcCchhHHHHHHhhhhHH-------------------------HHH-------HHcCCc---hhhhceee
Confidence 33444 5899999887665544433 233 467777 49999999
Q ss_pred cCCCChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEEEechhHHhheeeeEEec
Q 010144 397 LHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMK 476 (517)
Q Consensus 397 ~Hq~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~VlliafG~G~t~~a~vlr~~~ 476 (517)
.|++|++|+++..+.||+++|.++.||+.|++||||+||++++.|.+.++++ .++|.+.++++||+||+...++++|.+
T Consensus 276 ~HPGG~KVida~~~sLgls~e~l~~s~~~L~~~GNMSSatvLfVL~d~l~~~-~~~g~~Gl~~A~GPGf~sElvL~~w~~ 354 (356)
T COG3424 276 VHPGGPKVIDAYEESLGLSPEALELSWDVLREYGNMSSATVLFVLEDTLQKA-PKSGSRGLMFAMGPGFCSELVLLDWEG 354 (356)
T ss_pred eCCCCchHHHHHHHhcCCCHHHHHHHHHHHHHhCCccchhhHHHHHHHHHhc-CCCCcceeeeecCCcceeeeeeEEeec
Confidence 9999999999999999999999999999999999999999999999999986 689999999999999999999999975
|
|
| >PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-46 Score=386.33 Aligned_cols=322 Identities=17% Similarity=0.164 Sum_probs=253.7
Q ss_pred CCceEEEEEEEEeCCCCCceecHHHHHHHHHhcc-cCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhh
Q 010144 82 GQCCYMLAYECYKPCDETRRLDTESCARVVWRNK-KLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSE 160 (517)
Q Consensus 82 ~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~-~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~e 160 (517)
..+++|.++++|+|++ +++++++.+.+.... ..... .+++.+++||++|++.++. ++
T Consensus 3 ~~~v~I~~~g~~lP~~---~v~~~~~~~~~~~~~~~~~~~----~~~i~~~~Gi~~R~~~~~~-----~~---------- 60 (338)
T PRK09258 3 YSNVAILSLAYELAPV---VVTSSEIEERLAPLYERLRLP----PGQLEALTGIRERRWWPEG-----TQ---------- 60 (338)
T ss_pred ccceEEEEEEecCCCc---cCcHHHHHHHhhhcccccCCC----hhHhhhhcCceeEecCCCC-----CC----------
Confidence 4679999999999999 999999998764321 01111 1246778999999986542 32
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHc
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~a 239 (517)
..+|+.+|+++||+++|++++|||+||+++ ++++..|+++.+|+++||+++++.++|+++ ||+|++.||++|.+++++
T Consensus 61 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~~-~C~~~~~al~~A~~~i~~ 139 (338)
T PRK09258 61 LSDGAIAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLPKSCANFDVSN-ACLGFLNGMLDAANMIEL 139 (338)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHcCCCCCCceeehhh-hhHHHHHHHHHHHHHHHc
Confidence 245689999999999999999999999875 578889999999999999987799999997 999999999999999999
Q ss_pred CCCCEEEEEEecCCCCCCCCCC------Cc------cccccccccccceEEEEEeecccccccchhhccceeeeeeccCc
Q 010144 240 YKNKLAIVVSTESMGPNWYCGR------EK------SMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSND 307 (517)
Q Consensus 240 g~~~~aLVVs~E~~s~~~~~~~------dr------~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~ 307 (517)
++.++||||++|.++.. +++. +. ...+...+|||||+|+||++++...+ +++ ++.....+++
T Consensus 140 g~~~~~Lvv~~e~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~GDGA~A~ll~~~~~~~~--~~~---~~~~~~~~~~ 213 (338)
T PRK09258 140 GQIDYALVVSGESAREI-VEATIDRLLAPETTREDFAQSFATLTLGSGAAAAVLTRGSLHPR--GHR---LLGGVTRAAT 213 (338)
T ss_pred CCCCEEEEEEecccchh-ccchhhhhccCccchhhhhhccceEEecccceEEEEecCCCCCC--cce---eeeeeeecCC
Confidence 99999999999998872 2211 11 11233578999999999998654211 222 3333444444
Q ss_pred ccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCC
Q 010144 308 EAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLN 387 (517)
Q Consensus 308 ~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d 387 (517)
..++.+.+. .. .+.+++.++++.....+++.+.++| ++.|+++
T Consensus 214 ~~~~~~~~~-------~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~L-------~~~g~~~- 256 (338)
T PRK09258 214 EHHELCQGG-------RD----------------------GMRTDAVGLLKEGVELAVDTWEAFL-------AQLGWAV- 256 (338)
T ss_pred CcccccccC-------cc----------------------ceEEcHHHHHHHHHHHHHHHHHHHH-------HHcCCCH-
Confidence 433211100 00 0122334556666666777788877 7889986
Q ss_pred cccccceeecCCCChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEEEechhHHh
Q 010144 388 LKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKC 467 (517)
Q Consensus 388 ~~~did~~~~Hq~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~VlliafG~G~t~ 467 (517)
+|||+|++||+|+++++.+++.||++++++ +.++++||||+|||+|++|++++++|++++||+|++++||+|++|
T Consensus 257 --~did~~i~H~~~~~~~~~~~~~lgl~~~k~---~~~~~~~GN~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~ 331 (338)
T PRK09258 257 --EQVDRVICHQVGAAHTRAILKALGIDPEKV---FTTFPTLGNMGPASLPITLAMAAEEGFLKPGDRVALLGIGSGLNC 331 (338)
T ss_pred --HHCCEEecCCCCHHHHHHHHHHhCCCHHHc---eehHhhhCCcHHhHHHHHHHHHHHhCCCCCCCEEEEEEechhHhh
Confidence 899999999999999999999999999999 578899999999999999999999999999999999999999999
Q ss_pred heeeeEE
Q 010144 468 NNCVWEV 474 (517)
Q Consensus 468 ~a~vlr~ 474 (517)
+++++||
T Consensus 332 ~~~~~~~ 338 (338)
T PRK09258 332 SMLEVKW 338 (338)
T ss_pred HhHeeeC
Confidence 9999986
|
|
| >PRK06840 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-45 Score=381.56 Aligned_cols=327 Identities=15% Similarity=0.148 Sum_probs=253.7
Q ss_pred CCceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhhH
Q 010144 82 GQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEM 161 (517)
Q Consensus 82 ~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~ea 161 (517)
|++++|.+++.|+|++ +++++++.+..+. +++ ++.+++||.+|+++++. ++.
T Consensus 2 ~~~v~I~~~~~~lP~~---~v~~~~l~~~~g~----~~~------~~~~~~Gi~~r~~~~~~-----~~~---------- 53 (339)
T PRK06840 2 EMNVGIVGTGVYLPKD---VMTAEEIAEKTGI----PEE------VVIEKFGIYEKPVPGPE-----DHT---------- 53 (339)
T ss_pred CCceEEEEEEEeCCCc---ccCHHHHHHHhCC----CHH------HHhhhcCcceEeeCCCC-----CCH----------
Confidence 5789999999999999 9999999887653 222 46688999999987653 333
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEee--cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHc
Q 010144 162 DEIIFDTLDKLFARTDISPSEIDVLVVNV--SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (517)
Q Consensus 162 ~~la~~Aa~~aL~~agi~p~dID~LI~a~--s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~a 239 (517)
.+|+.+|+++||+++|++|+|||+||+++ ++++..|+.+++|+++||++ +++++++++ +|+|++.||++|.+++++
T Consensus 54 ~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~~p~~a~~l~~~lGl~-~~~~~~v~~-~C~~~~~al~~A~~~l~~ 131 (339)
T PRK06840 54 SDMAIAAAKPALKQAGVDPAAIDVVIYIGSEHKDYPVWSSAPKIQHEIGAK-NAWAFDIMA-VCASFPIALKVAKDLLYS 131 (339)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCCCCchHHHHHHHhCCC-Ccccccccc-cchHHHHHHHHHHHHHhc
Confidence 35589999999999999999999999763 35778999999999999997 789999996 999999999999999999
Q ss_pred -CCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccccceeeccc
Q 010144 240 -YKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVED 318 (517)
Q Consensus 240 -g~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~~~~~~ 318 (517)
+..+++|||++|..+. ..+..++.... ...|||||+|+||++++.. . +++.+...+|++.++.+..+.+
T Consensus 132 ~g~~~~~Lvv~~~~~s~-~~~~~~~~~~~-~~~~GDgAaA~ll~~~~~~-----~---~il~~~~~t~~~~~~~~~~~~~ 201 (339)
T PRK06840 132 DPSIENVLLVGGYRNSD-LVDYDNPRTRF-MFNFAAGGSAALLKKDAGK-----N---RILGSAIITDGSFSEDVRVPAG 201 (339)
T ss_pred CCCccEEEEEeeccccc-ccCcCCCCeee-eccCCCceeEEEEEecCCC-----C---ceEEEEEEEcCCccceEEecCC
Confidence 6778999999999887 33333333200 1348999999999986543 2 3566677788877766654433
Q ss_pred cCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHH-----HHHHHHHHHHHhhcCCCchhhhhCCCCCcccccc
Q 010144 319 QQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRY-----VIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIE 393 (517)
Q Consensus 319 ~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~-----~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did 393 (517)
+.. .+.+.+.... + +..+... +.+.++. .+..+++.+.++| +++|+++ +|||
T Consensus 202 g~~---~~~~~~~~~~-~---~~~~~~~------~~~~~~~~~~~~~~~~~~~~i~~~L-------~~~gl~~---~did 258 (339)
T PRK06840 202 GTK---QPASPETVEN-R---QHYLDVI------DPESMKERLDEVSIPNFLKVIREAL-------RKSGYTP---KDID 258 (339)
T ss_pred CcC---CCCccccccc-c---cceEEEc------CcHHHHHHhHhhHHHHHHHHHHHHH-------HHcCCCH---HHCC
Confidence 221 1111110000 0 0001111 1122222 2234567778887 8999996 8999
Q ss_pred eeecCCCChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEEEechhHHhheeeeE
Q 010144 394 HFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWE 473 (517)
Q Consensus 394 ~~~~Hq~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~VlliafG~G~t~~a~vlr 473 (517)
+|++||+|+++++.+++.||++++++ . ++++||||+|||+|++|++++++|++++||++++++||+|++|+++++|
T Consensus 259 ~~~~h~~~~~~~~~~~~~Lgl~~~~~---~-~~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~ill~~~G~G~s~~~~~l~ 334 (339)
T PRK06840 259 YLAILHMKRSAHIALLEGLGLTEEQA---I-YLDEYGHLGQLDQILSLHLALEQGKLKDGDLVVLVSAGTGYTWAATVIR 334 (339)
T ss_pred EEEECCcCHHHHHHHHHHcCCCHHHe---E-eHHhccchhhhhHHHHHHHHHHcCCCCCCCEEEEEEEehhhheeEEEEE
Confidence 99999999999999999999999997 2 6899999999999999999999999999999999999999999999999
Q ss_pred Ee
Q 010144 474 VM 475 (517)
Q Consensus 474 ~~ 475 (517)
|.
T Consensus 335 ~~ 336 (339)
T PRK06840 335 WG 336 (339)
T ss_pred ec
Confidence 83
|
|
| >TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-45 Score=379.02 Aligned_cols=316 Identities=21% Similarity=0.297 Sum_probs=260.0
Q ss_pred ceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhhHHH
Q 010144 84 CCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDE 163 (517)
Q Consensus 84 ~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~ea~~ 163 (517)
.++|.++++|+|++ +++++++.+.++.. + .++.+++|+++|++..++ ++. .+
T Consensus 2 ~~~I~~i~~~~P~~---~~~~~~~~~~~~~~----~------~~i~~~~gi~~r~~~~~~-----~~~----------~~ 53 (318)
T TIGR00747 2 YAGILGTGSYLPEK---VLTNADLEKMVDTS----D------EWIVTRTGIKERRIAADD-----ETS----------ST 53 (318)
T ss_pred CCEEEEEEEECCCc---eecHHHHHHhcCCc----h------HHeecccCceEEEECCCC-----CCH----------HH
Confidence 58999999999999 99999999876532 2 247788999999886553 322 45
Q ss_pred HHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCC
Q 010144 164 IIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKN 242 (517)
Q Consensus 164 la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~ 242 (517)
|+.+|+++||+++|++|+|||.||+++ ++++..|+.+.+++++||++ +++++++++ ||++++.||++|.++++++..
T Consensus 54 la~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~-~~~~~~v~~-~C~s~~~al~~A~~~i~~g~~ 131 (318)
T TIGR00747 54 MGFEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIK-GIPAFDLSA-ACAGFIYALSVAKQYIESGKY 131 (318)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCC-CCcEeehhh-hhHHHHHHHHHHHHHHHcCCC
Confidence 589999999999999999999999875 56777899999999999998 689999985 999999999999999999999
Q ss_pred CEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccccceeeccccCCC
Q 010144 243 KLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGH 322 (517)
Q Consensus 243 ~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~~~~~~~~g~ 322 (517)
+++|||++|..+. +.++.++.. ..+|||||+|+||++++... .++.++..++++.++.++.+.++...
T Consensus 132 ~~~Lvv~~e~~~~-~~~~~~~~~---~~~~GDGAaA~lL~~~~~~~--------~i~~~~~~~~~~~~~~~~~~~~~~~~ 199 (318)
T TIGR00747 132 KTVLVVGAEKLSS-TLDWTDRGT---CVLFGDGAGAVVLGESEDPG--------GIISTHLGADGTQGEALYLPAGGRPT 199 (318)
T ss_pred CEEEEEEehhhcC-cCCcCCCCe---EEEEecceeEEEEeecCCCC--------cEEEEEEEEcCCCcceEEECCCCcCC
Confidence 9999999999876 344445543 57899999999999876541 25566777787777766665432110
Q ss_pred CCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCCh
Q 010144 323 PGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGR 402 (517)
Q Consensus 323 ~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~ 402 (517)
.. ..+.+.+.+.+.++.....+.+.+.+++ +++|+.+ +||++|++||+++
T Consensus 200 ----~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l-------~~~g~~~---~di~~~~~h~~~~ 249 (318)
T TIGR00747 200 ----SG----------------PSPFITMEGNEVFKHAVRKMGDVVEETL-------EANGLDP---EDIDWFVPHQANL 249 (318)
T ss_pred ----CC----------------CCCceEECCHHHHHHHHHHHHHHHHHHH-------HHcCCCH---HHCCEEEECCCCH
Confidence 00 0001112234566666667777788877 7889986 8999999999999
Q ss_pred HHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEEEechhHHhheeeeEE
Q 010144 403 AVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEV 474 (517)
Q Consensus 403 ~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~VlliafG~G~t~~a~vlr~ 474 (517)
++++.+++.||++++|+ ..++++||||+|||+|++|++++++|++++||+|+++++|+|++|+++++||
T Consensus 250 ~~~~~~~~~lgi~~~k~---~~~~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~G~t~~~~~l~~ 318 (318)
T TIGR00747 250 RIIEALAKRLELDMSQV---VKTVHKYGNTSAASIPLALDELLRTGRIKPGDLLLLVAFGGGLTWGAALVRF 318 (318)
T ss_pred HHHHHHHHHcCCCHHHe---eehHhhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEehhheeeEEEEEC
Confidence 99999999999999999 4689999999999999999999999999999999999999999999999986
|
Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment. |
| >cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-45 Score=377.08 Aligned_cols=319 Identities=19% Similarity=0.282 Sum_probs=260.9
Q ss_pred ceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhhHHH
Q 010144 84 CCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDE 163 (517)
Q Consensus 84 ~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~ea~~ 163 (517)
+++|.++++|+|++ +++++++.+.++. +. +++.+++||++|+++++. ++. .+
T Consensus 1 ~~~I~~i~~~lP~~---~~~~~~~~~~~~~----~~------~~~~~~~Gi~~r~~~~~~-----~~~----------~~ 52 (320)
T cd00830 1 NARILGIGSYLPER---VVTNDELEKRLDT----SD------EWIRTRTGIRERRIADPG-----ETT----------SD 52 (320)
T ss_pred CCEEEEEEEECCCc---EEcHHHHHHHcCC----CH------HHhhhccCceEEeeCCCC-----CCH----------HH
Confidence 57999999999999 9999999988743 22 257789999999998653 322 45
Q ss_pred HHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCC
Q 010144 164 IIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKN 242 (517)
Q Consensus 164 la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~ 242 (517)
|+.+|++++|+++|+++++||.||+++ ++++..|+.+.+|+++||++ +++++++++ +|++++.||++|.+++++++.
T Consensus 53 la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~~~~l~~~lg~~-~~~~~~v~~-~C~s~~~al~~A~~~i~~g~~ 130 (320)
T cd00830 53 LAVEAAKKALEDAGIDADDIDLIIVATSTPDYLFPATACLVQARLGAK-NAAAFDINA-ACSGFLYGLSTAAGLIRSGGA 130 (320)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC-CCcEeeccc-cchHHHHHHHHHHHHHHcCCC
Confidence 589999999999999999999999875 46677899999999999997 799999995 999999999999999999999
Q ss_pred CEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccccceeeccccCCC
Q 010144 243 KLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGH 322 (517)
Q Consensus 243 ~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~~~~~~~~g~ 322 (517)
+++|||++|.++.. .++.++. ...+|||||+|+||++++.. . +++.++..+++..++.+..+.++...
T Consensus 131 ~~vLvv~~e~~s~~-~~~~~~~---~~~~~GDgAaA~ll~~~~~~-----~---~i~~~~~~~~~~~~~~~~~~~~~~~~ 198 (320)
T cd00830 131 KNVLVVGAETLSRI-LDWTDRS---TAVLFGDGAGAVVLEATEED-----P---GILDSVLGSDGSGADLLTIPAGGSRS 198 (320)
T ss_pred CEEEEEEehhhccc-cCcccCC---ceEEEeccceEEEEEecCCC-----C---cEEEEEEEEcCCCCCeEEeCCCCcCC
Confidence 99999999999873 3334443 26899999999999987652 1 34566777787777766655432111
Q ss_pred CCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCCh
Q 010144 323 PGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGR 402 (517)
Q Consensus 323 ~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~ 402 (517)
+ ... . . .......+.+.+++......+++.+.++| ++.|+.+ +|||+|++||+|+
T Consensus 199 ~---~~~--~----~------~~~~~~~~~~~~~~~~~~~~~~~~i~~~l-------~~~g~~~---~di~~~~~h~~~~ 253 (320)
T cd00830 199 P---FED--A----E------GGDPYLVMDGREVFKFAVRLMPESIEEAL-------EKAGLTP---DDIDWFVPHQANL 253 (320)
T ss_pred c---ccc--c----c------ccCccEEEcChHHHHHHHHhhHHHHHHHH-------HHcCCCH---HHCCEEEECCCCH
Confidence 0 000 0 0 00111233446677777777888888888 8899996 8999999999999
Q ss_pred HHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEEEechhHHhheeee
Q 010144 403 AVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVW 472 (517)
Q Consensus 403 ~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~VlliafG~G~t~~a~vl 472 (517)
++++.+++.||+++|++ ..++++|||++|||+|++|++++++|++++||+|+++++|+|++|+++++
T Consensus 254 ~~~~~~~~~lgl~~~~~---~~~~~~~Gn~~sas~~~~L~~~~~~~~~~~G~~vll~~~G~G~~~~~~l~ 320 (320)
T cd00830 254 RIIEAVAKRLGLPEEKV---VVNLDRYGNTSAASIPLALDEAIEEGKLKKGDLVLLLGFGAGLTWGAALL 320 (320)
T ss_pred HHHHHHHHHhCCCHHHh---hhhHHhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchHHhhHHhhC
Confidence 99999999999999999 57999999999999999999999999999999999999999999999875
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. |
| >PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-44 Score=367.36 Aligned_cols=316 Identities=20% Similarity=0.283 Sum_probs=258.9
Q ss_pred CceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhhHH
Q 010144 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMD 162 (517)
Q Consensus 83 ~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~ea~ 162 (517)
..|+|.++++|+|++ +++++++.+..+.. + +++.+++||++|+++.++ ++ ..
T Consensus 2 ~~v~I~ai~~~lP~~---~~~~~~~~~~~~~~----~------~~i~~~~gi~~r~~~~~~-----~~----------~~ 53 (319)
T PRK09352 2 MYAKILGTGSYLPER---VVTNDDLEKMVDTS----D------EWIVTRTGIKERRIAAPD-----ET----------TS 53 (319)
T ss_pred CceEEEEEEEECCCe---EEcHHHHHHHcCCC----H------HHhhhhcCeEEEEeCCCC-----CC----------HH
Confidence 368999999999999 99999999876531 2 257789999999876542 22 24
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCC
Q 010144 163 EIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYK 241 (517)
Q Consensus 163 ~la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~ 241 (517)
+|+.+|++++|+++|++++|||.||+++ +++...|+.+.+|+.++|++ +++.+++++ +|++++.||.+|.++|++|.
T Consensus 54 ~la~~A~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~~~i~~~lG~~-~~~~~~v~~-~Casg~~al~~A~~~i~~g~ 131 (319)
T PRK09352 54 DLATEAAKKALEAAGIDPEDIDLIIVATTTPDYAFPSTACLVQARLGAK-NAAAFDLSA-ACSGFVYALSTADQFIRSGA 131 (319)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHHhCCC-CCcEeeccc-cchhHHHHHHHHHHHHHcCC
Confidence 5689999999999999999999999875 46667899999999999995 789999996 99999999999999999999
Q ss_pred CCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccccceeeccccCC
Q 010144 242 NKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQG 321 (517)
Q Consensus 242 ~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~~~~~~~~g 321 (517)
.+++||+++|.++. +.+..++.. ..+|||||+|+||+++++. +++.++..++++..+.+..+.++..
T Consensus 132 ~~~vLvv~~e~~s~-~~~~~~~~~---~~~~gDGaaA~ll~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (319)
T PRK09352 132 YKNVLVIGAEKLSR-IVDWTDRST---CVLFGDGAGAVVLGASEEP---------GILSTHLGSDGSYGDLLYLPGGGSR 198 (319)
T ss_pred CCEEEEEEehhhcc-ccCcccCCc---eEEEeccceEEEEEEcCCC---------CeEEEEEEEcCCCCCeEEeCCCCCC
Confidence 99999999999887 344444443 5799999999999987653 1345666777766665554433211
Q ss_pred CCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCC
Q 010144 322 HPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGG 401 (517)
Q Consensus 322 ~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~ 401 (517)
. +.+ .+...+.+.++++.....+.+.+.++| +++|+.+ +|||+|++||+|
T Consensus 199 ~---~~~-----------------~~~~~~~~~~~~~~~~~~~~~~i~~~l-------~~~g~~~---~di~~~~~h~~~ 248 (319)
T PRK09352 199 G---PAS-----------------PGYLRMEGREVFKFAVRELAKVAREAL-------EAAGLTP---EDIDWLVPHQAN 248 (319)
T ss_pred C---CCC-----------------CCceEECCHHHHHHHHHHHHHHHHHHH-------HHcCCCH---HHCCEEEECCCC
Confidence 1 000 001122235566666777888888888 7889986 899999999999
Q ss_pred hHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEEEechhHHhheeeeEE
Q 010144 402 RAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEV 474 (517)
Q Consensus 402 ~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~VlliafG~G~t~~a~vlr~ 474 (517)
+++++.+++.||+|++++ ..++++|||+++||++++|++++++|++++||+|++++||+|++|+++++||
T Consensus 249 ~~~~~~~~~~lg~~~~~~---~~~~~~~Gn~~~a~~~~~L~~~~~~g~~~~Gd~vll~s~G~G~~~~~~ll~~ 318 (319)
T PRK09352 249 LRIIDATAKKLGLPMEKV---VVTVDKYGNTSAASIPLALDEAVRDGRIKRGDLVLLEGFGGGLTWGAALVRW 318 (319)
T ss_pred HHHHHHHHHHhCCCHHHh---hhhHHhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhheeEEEEEEe
Confidence 999999999999999998 5789999999999999999999999999999999999999999999999998
|
|
| >PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-44 Score=376.28 Aligned_cols=347 Identities=15% Similarity=0.169 Sum_probs=256.7
Q ss_pred ceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhhHHH
Q 010144 84 CCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDE 163 (517)
Q Consensus 84 ~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~ea~~ 163 (517)
+|+|.++|+|+|++ +++|+++.+.++......+ ...++|++++||++|+++.+.. ++. .+...+
T Consensus 2 ~v~I~gig~~lP~~---~v~n~~~~~~~~~~~~~~~---~~~~~i~~~~Gi~~R~~~~~~~---~~~-------~~~~~~ 65 (378)
T PRK06816 2 NVYITSTGAFLPGE---PVSNDEMEAYLGLINGKPS---RARRIILRNNGIKTRHYALDPE---GRP-------THSNAQ 65 (378)
T ss_pred CeEEEeeeecCCCC---ccCHHHHHHHHhhccCCcH---HHHHHHHHhCCCceEEEEECCC---CCC-------CCCHHH
Confidence 58999999999999 9999999988765421111 1124799999999999975421 010 012457
Q ss_pred HHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCC
Q 010144 164 IIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKN 242 (517)
Q Consensus 164 la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~ 242 (517)
|+.+|+++||+++|++|+|||+||+++ ++++..|+.+..|+++||++ ++.++++++ +|+|++.||++|.+++++|+.
T Consensus 66 La~~A~~~aL~~agi~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~-~~~~~~v~~-~Cas~~~al~~A~~~i~sg~~ 143 (378)
T PRK06816 66 MAAEAIRDLLDDAGFSLGDIELLACGTSQPDQLMPGHASMVHGELGAP-PIEVVSSAG-VCAAGMMALKYAYLSVKAGES 143 (378)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEECCCCcCChHHHHHHHhhCCCC-CCceeeecC-cCHHHHHHHHHHHHHHHCCCC
Confidence 799999999999999999999999975 56788899999999999998 589999986 999999999999999999999
Q ss_pred CEEEEEEecCCCCCCCCCCC------------c--cc----cccccccccceEEEEEeecccccccchhhccceeeeeec
Q 010144 243 KLAIVVSTESMGPNWYCGRE------------K--SM----MLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFG 304 (517)
Q Consensus 243 ~~aLVVs~E~~s~~~~~~~d------------r--~~----lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~ 304 (517)
++||||++|.+|..+ ++.+ + .. -..+++|||||+|+||++.+... +..+ ++......
T Consensus 144 ~~vLvv~~E~~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fGDGA~A~vl~~~~~~~---g~~l-~~~~~~~~ 218 (378)
T PRK06816 144 RNAVATASELASRWF-RASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDGAGAVLLENKPRPD---GLSL-RIDWIDLR 218 (378)
T ss_pred CEEEEEeEccchhhh-hhhhhhhHHHHhhcCcccCCCCCCCCCCCEeeecccEEEEEEecCCCC---CceE-EEEEEeee
Confidence 999999999998732 2111 1 00 01135799999999999865531 1111 11111222
Q ss_pred cCcccccceeeccccCC----CCCcc-cchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchh
Q 010144 305 SNDEAYECCMQVEDQQG----HPGFR-LTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPE 379 (517)
Q Consensus 305 td~~~~~~~~~~~~~~g----~~g~~-ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~ 379 (517)
+++..+..++...+... ..+.. ...+.+... ....+.+++..+++++...+++.+.++|
T Consensus 219 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~i~~~L------- 282 (378)
T PRK06816 219 SYAGELPVCMYAGAEKNEDGSLKGWSDYPPEEAEAA---------SALSLKQDVRLLNENIVVYTIKPLLELV------- 282 (378)
T ss_pred cccccCccceecCCccCCCCCccCcccCCHHHHHhc---------cCchHHhHHHHHHHHhHHHHHHHHHHHH-------
Confidence 33222222222111000 00000 011100000 0012344556777777777788898888
Q ss_pred hhhCCCCCcccccceeecCCCChHHHHHHHhhC-----CCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCC
Q 010144 380 AVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGL-----ELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGD 454 (517)
Q Consensus 380 ~~~g~~~d~~~did~~~~Hq~~~~il~~i~~~L-----gl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd 454 (517)
++.|+++ +|||+|++||+|.++++.+.++| |+|++|+ ..++++||||+|||+|++|++++++|++++||
T Consensus 283 ~~~gl~~---~DId~~v~Hq~n~~~~~~v~~~l~~~~~gl~~~k~---~~~~~~~GNt~sAsipi~L~~a~~~g~~~~Gd 356 (378)
T PRK06816 283 DKRNLDP---DDIDYFLPHYSSEYFREKIVELLAKAGFMIPEEKW---FTNLATVGNTGSASIYIMLDELLNSGRLKPGQ 356 (378)
T ss_pred HHcCCCh---hhCCEEeeCcccHHHHHHHHHHHHhccCCCChhhe---EEeccccccccchHHHHHHHHHHHcCCCCCCC
Confidence 7899996 99999999999999999999987 9999998 68999999999999999999999999999999
Q ss_pred EEEEEEechh-HHhheeeeEEe
Q 010144 455 RILMISLGAG-FKCNNCVWEVM 475 (517)
Q Consensus 455 ~VlliafG~G-~t~~a~vlr~~ 475 (517)
+|++++.|+| +++|.++++|+
T Consensus 357 ~vl~~~~~s~~~~~~~~~~~~~ 378 (378)
T PRK06816 357 KILCFVPESGRFSTAFMLLTVV 378 (378)
T ss_pred EEEEEEecccchhheeEEEEEC
Confidence 9999988777 99999999984
|
|
| >PRK04262 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-44 Score=370.13 Aligned_cols=316 Identities=19% Similarity=0.227 Sum_probs=243.3
Q ss_pred CceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhhHH
Q 010144 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMD 162 (517)
Q Consensus 83 ~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~ea~ 162 (517)
++++|.++|.|+|++ +++++++.+..+. +++ ++.+++||.+|++++++ ++. .
T Consensus 1 ~~v~I~~~g~ylP~~---~v~~~el~~~~~~----~~~------~i~~~~Gi~~R~~~~~~-----~~~----------~ 52 (347)
T PRK04262 1 MMVGIVGYGAYIPRY---RIKVEEIARVWGD----DPE------AIKRGLGVEEKSVPGPD-----EDT----------A 52 (347)
T ss_pred CceeEEEEEEeCCCE---EecHHHHHHHhCc----CHH------HHhhccCeeeeecCCCC-----cCH----------H
Confidence 468999999999999 9999999988753 232 68889999999987653 333 3
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCC
Q 010144 163 EIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYK 241 (517)
Q Consensus 163 ~la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~ 241 (517)
+|+.+|+++||+++|++|+|||+||+++ ++++..|+.+.+|+++||+++++.++|+++ ||+|++.||++|.+++++|+
T Consensus 53 ~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~~~~dv~~-~C~~~~~aL~~A~~~i~sg~ 131 (347)
T PRK04262 53 TIAVEAARNALKRAGIDPKEIGAVYVGSESHPYAVKPTATIVAEALGATPDLTAADLEF-ACKAGTAALQAAMGLVKSGM 131 (347)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcccccHHHHHHHHcCCCCCceEEEHHH-hHHHHHHHHHHHHHHHHcCC
Confidence 5589999999999999999999999875 577888999999999999986789999996 99999999999999999999
Q ss_pred CCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeee-eccCcccccceeecccc-
Q 010144 242 NKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTH-FGSNDEAYECCMQVEDQ- 319 (517)
Q Consensus 242 ~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~-~~td~~~~~~~~~~~~~- 319 (517)
.++||||++|.... ++.++. ...|||||+|+||++++.. .+ ++.+. ..+|+ .+.+. ..+.
T Consensus 132 ~~~aLVv~~e~~~~---~~~~~~----~~~~GDGA~A~ll~~~~~~-----~~---i~~~~~~~~d~--~d~~~-~~~~~ 193 (347)
T PRK04262 132 IKYALAIGADTAQG---APGDAL----EYTAAAGGAAFIIGKEEVI-----AE---IEATYSYTTDT--PDFWR-REGEP 193 (347)
T ss_pred CCEEEEEEEeeecc---CCCCCC----CCcCCCCcEEEEEecCccc-----ce---eeccccccccc--hhhcC-CCCCc
Confidence 99999999998432 223332 2467999999999974421 22 22221 11222 12111 1100
Q ss_pred CCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCC
Q 010144 320 QGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHP 399 (517)
Q Consensus 320 ~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq 399 (517)
....+..+.. ....+ +.+++.+.++| ++.|+++ +|||+|++||
T Consensus 194 ~~~~~~~~~~-----------------------~~~~~----~~~~~~i~~~L-------~~~gl~~---~dId~~v~Hq 236 (347)
T PRK04262 194 YPRHGGRFTG-----------------------EPAYF----KHIISAAKGLM-------EKLGLKP---SDYDYAVFHQ 236 (347)
T ss_pred CCCcCceecc-----------------------hHHHH----HHHHHHHHHHH-------HHhCcCH---HHhceeecCC
Confidence 0000000000 00111 34566777777 7889986 8999999999
Q ss_pred CChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEEEechhHHhheeeeEEeccCC
Q 010144 400 GGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLE 479 (517)
Q Consensus 400 ~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~VlliafG~G~t~~a~vlr~~~~~~ 479 (517)
+|.++++.+++.||++++++..+. ++++||||+|||+|++|+++++ ++++||+|++++||+|+++.++++|+.+..+
T Consensus 237 ~n~~~~~~~~~~Lgl~~ek~~~~~-~~~~~GNt~sAsi~~~L~~~~~--~~~~Gd~vll~~~G~G~~~~~~~~~~~~~~~ 313 (347)
T PRK04262 237 PNGKFPLRVAKMLGFTKEQVKPGL-LTPYIGNTYSGSALLGLAAVLD--VAKPGDRILVVSFGSGAGSDAFSITVTDAIE 313 (347)
T ss_pred CchHHHHHHHHHcCCCHHHhhccc-hhhhhCChHHHHHHHHHHHHHH--hCCCCCEEEEEecCCCcceeeEEEEechhHH
Confidence 999999999999999999995332 5899999999999999999987 4899999999999999999999999987766
Q ss_pred CCCchh
Q 010144 480 DPNVWK 485 (517)
Q Consensus 480 ~~~~w~ 485 (517)
-..+|.
T Consensus 314 ~~~~~~ 319 (347)
T PRK04262 314 EKRDLA 319 (347)
T ss_pred Hhhhcc
Confidence 554563
|
|
| >TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-43 Score=366.72 Aligned_cols=319 Identities=16% Similarity=0.212 Sum_probs=242.2
Q ss_pred eEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhhHHHH
Q 010144 85 CYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDEI 164 (517)
Q Consensus 85 v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~ea~~l 164 (517)
++|.++|+|+|++ +++++++.+..+. +++ ++.+++||++|++++++ ++.+ +|
T Consensus 2 ~~I~g~g~~lP~~---~v~n~~l~~~~~~----~~~------~i~~~~Gi~~r~v~~~~-----~~~~----------~l 53 (345)
T TIGR00748 2 AGIVGYGAYIPMY---RIKVEEIARVWGK----DPE------SISNGLPVEEKAVPGLD-----EDTA----------TI 53 (345)
T ss_pred ccEEEEEEeCCCe---eecHHHHHHHhCC----CHh------HeeeccceeeeecCCCC-----CCHH----------HH
Confidence 6899999999999 9999999987653 232 57789999999987653 4333 44
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCC
Q 010144 165 IFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNK 243 (517)
Q Consensus 165 a~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~ 243 (517)
+.+|+++||+++|++|+|||+||+++ ++++..|+.+..|++.||+++++.++|+++ ||+|++.||++|.+++++|..+
T Consensus 54 a~~Aa~~aL~~agl~~~dID~li~~s~~~~~~~p~~a~~v~~~LGl~~~~~~~dv~~-aC~g~~~al~~A~~~i~sg~~~ 132 (345)
T TIGR00748 54 GVEAARNALKRAKIDPKDIGAVYVGSESHPYAVKPTATIVAEAIGATPDLTAADLEF-ACKAGTAGIQACMGLVASGMIK 132 (345)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEecCCCccccchHHHHHHHcCCCCCceEEEHHH-hHHHHHHHHHHHHHHHHcCCCC
Confidence 79999999999999999999999875 577778999999999999977899999997 9999999999999999999999
Q ss_pred EEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccccceeeccccCCCC
Q 010144 244 LAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHP 323 (517)
Q Consensus 244 ~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~~~~~~~~g~~ 323 (517)
++|||++|..+.. +.++- ...|||||+|+||++.+.. .++.+. ....+|+. + .+... +.
T Consensus 133 ~vLVv~~d~~~~~---~~~~~----~~~~GDGAaA~vl~~~~~~-----~~~~~~--~~~~~d~~--~-~~~~~---~~- 191 (345)
T TIGR00748 133 YGLAIGADTAQGA---PGDAL----EYTAGAGGAAYIIGEKNTV-----AYFEGT--YSYTTDTP--D-FWRRE---GE- 191 (345)
T ss_pred EEEEEEEeecccC---CCccC----cccCCCceEEEEEccCCcc-----eEeecc--cceecccc--c-ccccC---CC-
Confidence 9999999998642 23332 3578999999999965431 111110 11122221 1 11110 00
Q ss_pred CcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChH
Q 010144 324 GFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRA 403 (517)
Q Consensus 324 g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~ 403 (517)
.+ |...+ +. ....++++++. +.+.++| +++|+.+ +|||+|++||+|.+
T Consensus 192 ~~------~~~~~-------~~-----~~~~~~~~~~~----~~~~~~L-------~~~gl~~---~did~~i~Hq~~~~ 239 (345)
T TIGR00748 192 PY------PRHGG-------RF-----TGEPAYFHHVV----TAAKGLM-------EKLGLTP---EDFDYAVFHQPNGK 239 (345)
T ss_pred cC------CCcCC-------ee-----cChHHHHHHHH----HHHHHHH-------HHcCCCH---HHcCEEEeCCCChH
Confidence 00 00000 00 00123454443 4455566 7889996 89999999999999
Q ss_pred HHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEEEechhHHhheeeeEEeccCCCCCc
Q 010144 404 VIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLEDPNV 483 (517)
Q Consensus 404 il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~VlliafG~G~t~~a~vlr~~~~~~~~~~ 483 (517)
+++.+.+.||++++++..+ ...++||||+|||+|+.|+++++ ++++||+|++++||+|++|++++++|.+..+...+
T Consensus 240 ~~~~~~~~lgl~~ek~~~~-~~~~~~GNt~sAsipl~L~~~~~--~~~~Gd~vll~~~G~G~s~~~~~~~~~~~~~~~~~ 316 (345)
T TIGR00748 240 FYLVAARMLGFPKEQVKPG-LLTPRIGNTYSGATPVGLSAVLD--IAEPGDRILAVSYGSGAGSDAFSIVVQDAIEEKRD 316 (345)
T ss_pred HHHHHHHHcCCCHHHeecc-ccccccCchhhhHHHHHHHHHHH--hcCCCCEEEEEEecCCcceeEEEEEEchhHHHHhh
Confidence 9999999999999998421 12489999999999999999986 68999999999999999999999999887776667
Q ss_pred hhhhc
Q 010144 484 WKDCI 488 (517)
Q Consensus 484 w~~~~ 488 (517)
|.-.|
T Consensus 317 ~~~~~ 321 (345)
T TIGR00748 317 LAPKV 321 (345)
T ss_pred hhhhH
Confidence 85333
|
Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound. |
| >PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-42 Score=361.57 Aligned_cols=347 Identities=16% Similarity=0.179 Sum_probs=254.4
Q ss_pred ceEEEEEEEEeCCCCCceecHHHHHHHHHhcc-cCChHH---H----------HHHHHHHHHhCCceeEeccCC-CcCCC
Q 010144 84 CCYMLAYECYKPCDETRRLDTESCARVVWRNK-KLGLEE---Y----------RFLLKNMVSSGIGEETYGPRN-VVEGR 148 (517)
Q Consensus 84 ~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~-~~~~~~---~----------~~~~ri~~~sGI~~r~~~~~~-~~~~~ 148 (517)
+|+|.++|+|+|++ +++|+++.+.++... ++..+. . ...++|.+++||++|+++.+. .....
T Consensus 2 ~~~I~~~g~~lP~~---~v~n~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~ 78 (372)
T PRK07515 2 NVVISGTGLYTPPE---SISNEELVASFNAYVERFNAENAAAIAAGEVEALQPSSSEFIEKASGIKSRYVMDKEGILDPD 78 (372)
T ss_pred CcEEEEEEeecCCc---cccHHHHHHHHhhhhhhhcccchhhhccccccccCCCCHHHhhhccCCceEEEecccccCccc
Confidence 58999999999999 999999998864211 110000 0 013468889999999997531 00000
Q ss_pred CCCcc----HHHhHhhHHHHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcc
Q 010144 149 EESPS----LAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGC 223 (517)
Q Consensus 149 ~~~~~----m~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgC 223 (517)
+..+. .......+.+|+.+|+++||+++|++++|||.||+++ ++++..|+.+.+|++.||++ +.++++++ +|
T Consensus 79 ~~~~~~~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl~--~~~~~v~~-aC 155 (372)
T PRK07515 79 RMRPRIPERSNDELSIQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIE--GFAFDMNV-AC 155 (372)
T ss_pred ccCcccccccccchhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCCC--CcEEEecc-hh
Confidence 00001 1011124578999999999999999999999999876 46778999999999999996 57899985 99
Q ss_pred hHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeeee
Q 010144 224 SASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHF 303 (517)
Q Consensus 224 sggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~ 303 (517)
+|++.||.+|.++|++|..++||||++|.++.. .++.|++. ..+|||||+|+||++.+....+.+++ ++.++.
T Consensus 156 asg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-~~~~d~~~---~~lfGDgAaA~vL~~~~~~~~~~~~~---il~~~~ 228 (372)
T PRK07515 156 SSATFGIQTAANAIRSGSARRVLVVNPEICSGH-LNFRDRDS---HFIFGDVATAVIVERADTATSAGGFE---ILGTRL 228 (372)
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEeeeccccc-ccccCCCC---CEEecCccEEEEEeeccccccCCCce---EEEEEe
Confidence 999999999999999999999999999999873 34456543 68999999999999865432122333 333443
Q ss_pred ccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhC
Q 010144 304 GSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLG 383 (517)
Q Consensus 304 ~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g 383 (517)
.++. .+.+..+. |. +.....+.+. .....+.|++.++++++...+++.+.++| +++|
T Consensus 229 ~~~~--~~~~~~~~---G~-~~~~~~~~~~----------~~~~~~~~~g~~~~~~~~~~~~~~i~~~L-------~~~g 285 (372)
T PRK07515 229 FTQF--SNNIRNNF---GF-LNRADPEGIG----------ARDKLFVQEGRKVFKEVCPMVAEHIVEHL-------AENG 285 (372)
T ss_pred eccc--ccceecCC---CC-CCCCCccccc----------cccceEEeccHHHHHHHHHHHHHHHHHHH-------HHcC
Confidence 3321 12222111 10 0000000000 00012345667888899999999999998 8999
Q ss_pred CCCCcccccceeecCCCChHHHHHHHhh-CCCC--cccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEEE
Q 010144 384 AGLNLKAGIEHFCLHPGGRAVIDGTGKG-LELD--EYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMIS 460 (517)
Q Consensus 384 ~~~d~~~did~~~~Hq~~~~il~~i~~~-Lgl~--~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~Vllia 460 (517)
+.+ +|||+|++||+|.++++.+.+. ||++ +++. +.++++||||+|||+|++|+++. +++++||+|++++
T Consensus 286 l~~---~dId~~~~Hq~~~~~~d~~~~~llg~~~~~~~~---~~~~~~~GNt~sasi~~~L~~~~--~~~~~Gd~vll~~ 357 (372)
T PRK07515 286 LTP---ADVKRFWLHQANINMNQLIGKKVLGRDATPEEA---PVILDEYANTSSAGSIIAFHKHS--DDLAAGDLGVICS 357 (372)
T ss_pred CCH---HHCCEEEECCCCHHHHHHHHHHhccCCCChhhc---eEeHHhcCCchhhHHHHHHHHHh--ccCCCCCEEEEEE
Confidence 996 9999999999999999999988 5654 4444 67999999999999999999985 5689999999999
Q ss_pred echhHHhheeeeEE
Q 010144 461 LGAGFKCNNCVWEV 474 (517)
Q Consensus 461 fG~G~t~~a~vlr~ 474 (517)
||+|++|+++++|.
T Consensus 358 ~G~G~~~~~~ll~~ 371 (372)
T PRK07515 358 FGAGYSIGSVIVRK 371 (372)
T ss_pred ecccHHHHHHHhcc
Confidence 99999999999874
|
|
| >cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-40 Score=338.52 Aligned_cols=319 Identities=21% Similarity=0.255 Sum_probs=247.2
Q ss_pred ceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhhHHH
Q 010144 84 CCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDE 163 (517)
Q Consensus 84 ~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~ea~~ 163 (517)
.|+|.++++|+|++ +++++++.+..+.. ++..++||++|++..+. ++ ..+
T Consensus 1 ~v~I~~i~~~lP~~---~v~~~~~~~~~~~~------------~~~~~~gi~~r~~~~~~-----~~----------~~~ 50 (324)
T cd00827 1 DVGIEAIGAYLPRY---RVDNEELAEGLGVD------------PGKYTTGIGQRHMAGDD-----ED----------VPT 50 (324)
T ss_pred CccEEEEEecCCce---eecHHHHHHHhCCC------------cceeeeecceeEecCCC-----CC----------HHH
Confidence 47899999999999 99999999876531 35677899999987542 22 235
Q ss_pred HHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCC
Q 010144 164 IIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKN 242 (517)
Q Consensus 164 la~~Aa~~aL~~agi~p~dID~LI~a~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~ 242 (517)
|+.+|++++|+++|++++|||.||++++ ++...|+.+.+|+++||++ +++++++++ +|+|++.||++|.++|++|..
T Consensus 51 l~~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~~~~~~i~~~lg~~-~~~~~~v~~-~C~s~~~al~~A~~~i~~g~~ 128 (324)
T cd00827 51 MAVEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLT-NAEAFDLKQ-ACYGGTAALQLAANLVESGPW 128 (324)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCccHHHHHHHHcCCC-CCceeehhh-hhHHHHHHHHHHHHHHHcCCC
Confidence 6899999999999999999999998754 5566889999999999998 899999996 999999999999999999999
Q ss_pred CEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccccceeeccccCCC
Q 010144 243 KLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGH 322 (517)
Q Consensus 243 ~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~~~~~~~~g~ 322 (517)
+++|||++|.++.... ...+ ..++|||||+|+||++++... .+ .+..++..+++..++ .+.+.
T Consensus 129 ~~vlvv~~e~~~~~~~-~~~~----~~~~~gdgaaA~ll~~~~~~~---~~---~i~~~~~~~~~~~~~-~~~~~----- 191 (324)
T cd00827 129 RYALVVASDIASYLLD-EGSA----LEPTLGDGAAAMLVSRNPGIL---AA---GIVSTHSTSDPGYDF-SPYPV----- 191 (324)
T ss_pred CEEEEEEEHHhhhccc-CCCC----ccccccCceEEEEEecCcccc---cC---Cceeeeeeccccccc-Cccce-----
Confidence 9999999999987321 1122 368999999999999876520 12 345566666665432 00000
Q ss_pred CCcccchhHHHHHHHHHhhhhhhcccccCcH--HHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCC
Q 010144 323 PGFRLTKQLTKAAALAFTMNLQVLVPKILPL--REQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPG 400 (517)
Q Consensus 323 ~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~--~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~ 400 (517)
.+..... +.. +. ....+.++. .+++......+++.+.+++ ++.+++ +|||+|++||+
T Consensus 192 ~~~~~~~--~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-------~~~~~~----~~i~~~~~h~~ 250 (324)
T cd00827 192 MDGGYPK--PCK--LA------YAIRLTAEPAGRAVFEAAHKLIAKVVRKAL-------DRAGLS----EDIDYFVPHQP 250 (324)
T ss_pred eccCCCc--chh--hh------hhcceeecCCccchHHHHhHHHHHHHHHHH-------HHcccc----cccceeeccCc
Confidence 0000000 000 00 000112222 3566666677788888877 666765 68999999999
Q ss_pred Ch-HHHHHHHhhCCCCcccchhhhh-cccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEEEechhHHhheeee
Q 010144 401 GR-AVIDGTGKGLELDEYDLEPARM-ALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVW 472 (517)
Q Consensus 401 ~~-~il~~i~~~Lgl~~e~~~~S~~-~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~VlliafG~G~t~~a~vl 472 (517)
|+ .+++.+++.|+++++++.+++. ++++||||+|||+|++|+++++++++++||+|+++++|+|++|+++++
T Consensus 251 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~~~~~~Gd~vl~~~~G~G~~~~~~~~ 324 (324)
T cd00827 251 NGKKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLGLASLLESGKLKAGDRVLLFSYGSGFTAEAFVL 324 (324)
T ss_pred hHHHHHHHHHHHccchHhhhccchhhHHHHhCchHHHHHHHHHHHHHhcCCCCCCCEEEEEEeccchhheeccC
Confidence 99 9999999999999999975553 899999999999999999999999999999999999999999999864
|
They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues. |
| >TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-37 Score=324.50 Aligned_cols=307 Identities=14% Similarity=0.171 Sum_probs=230.7
Q ss_pred eEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhhHHHH
Q 010144 85 CYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDEI 164 (517)
Q Consensus 85 v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~ea~~l 164 (517)
|+|.+++.|+|+. +++++++.+..+. +++ ++...+|++++++.++. ++..+ |
T Consensus 1 iGI~~i~~y~P~~---~v~~~ela~~~g~----~~~------~~~~g~G~~~~~~~~~~-----ed~~~----------l 52 (379)
T TIGR01835 1 IGIDKISFFTPQN---YLDMTALAEARGV----DPE------KFHIGIGQKKMAVPPID-----EDIVT----------M 52 (379)
T ss_pred CCEeEEEEECCCE---EeeHHHHHHHhCC----CHH------HHHhhcCceEEeeCCCC-----CCHHH----------H
Confidence 5899999999999 9999999987653 232 57778999999876553 43334 4
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCC
Q 010144 165 IFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNK 243 (517)
Q Consensus 165 a~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~ 243 (517)
+.+|+++||+++ +|++||+||++| |+++..|+.+..|++.||+++++.++|+.+ +|+|++.||++|.+++++++.+
T Consensus 53 a~~Aa~~aL~~a--~~~~Id~li~~t~s~~~~~~s~a~~v~~~Lgl~~~~~~~dv~~-aC~gg~~aL~~A~~~i~s~~~~ 129 (379)
T TIGR01835 53 AASAAKPILDRN--DKQKIDMVIFGTESGIDQSKAAAVYVHGLLGLQPFCRSFELKQ-ACYGATAALQMAKGHVALSPDR 129 (379)
T ss_pred HHHHHHHHHHhC--CHhhCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCceEEEecc-ccHHHHHHHHHHHHHHHcCCCC
Confidence 799999999998 899999999974 677788999999999999988899999997 9999999999999999999999
Q ss_pred EEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccccceeeccccCCCC
Q 010144 244 LAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHP 323 (517)
Q Consensus 244 ~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~~~~~~~~g~~ 323 (517)
+||||++|..... . .+. ...+|||||+|+||++++.- ..++. .+...+++. ++ .+.+.+.
T Consensus 130 ~aLVv~~D~a~~~--~-~~~----~~~~~GdGA~A~Ll~~~~~i---~~~~~----~~~~~t~~~-~d-f~~p~~~---- 189 (379)
T TIGR01835 130 KVLVIASDIAKYG--L-ESP----GEPTQGAGAVAMLVSADPKL---LAINE----DSVLYTDDI-MD-FWRPNYS---- 189 (379)
T ss_pred eEEEEEeehhhcc--c-CCC----CCccccCccEEEEEecCCCe---eEEec----cceeeecCC-CC-ccCCCCC----
Confidence 9999999996531 1 111 13679999999999976421 00100 111222221 11 1222110
Q ss_pred CcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChH
Q 010144 324 GFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRA 403 (517)
Q Consensus 324 g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~ 403 (517)
..| .+++..........+.+.+.+.+ ++.|+++ +|||+|++||++.+
T Consensus 190 ------~~~-----------------~v~g~~s~~~y~~~~~~~~~~~l-------~~~g~~~---~did~~i~H~p~~~ 236 (379)
T TIGR01835 190 ------TTA-----------------LVDGQYSNEQYLNAFENAWNDYA-------KRTGLSL---ADFAAFCFHVPFTK 236 (379)
T ss_pred ------Cce-----------------eECcHHHHHHHHHHHHHHHHHHH-------HHhCCCH---HHcCEEEECCCCCc
Confidence 001 11223333344455667777777 7889985 89999999999777
Q ss_pred H----HHHHHhhCCCCc-cc----chhhhhcccCcccchhhHHHHHHHHHHHcC-CCCCCCEEEEEEechhHHhheeeeE
Q 010144 404 V----IDGTGKGLELDE-YD----LEPARMALHRFGNTSAGGLWYVLGYMEAKK-RLKKGDRILMISLGAGFKCNNCVWE 473 (517)
Q Consensus 404 i----l~~i~~~Lgl~~-e~----~~~S~~~l~~~GNtsSASi~~~L~~~~~~g-~i~~Gd~VlliafG~G~t~~a~vlr 473 (517)
+ ++.+.+.++++. ++ +++|+.+.+++|||+|||+++.|+.+++++ ++++||+|++++||+|+.......+
T Consensus 237 ~~~k~~~~~l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~~l~L~~~l~~~~~~~~Gd~ill~s~GsG~~ae~~~~~ 316 (379)
T TIGR01835 237 MGLKALRHILKKNYEDEDESVQNAYLESIIYNREVGNLYTGSLYLGLASLLENAFEDTTGDKIGLFSYGSGAVAEFFSGT 316 (379)
T ss_pred HHHHHHHHHHhhcccccHHHHHHHhhhhhhhhhhcCchHhHHHHHHHHHHHHhcccCCCCCEEEEEEecCCcceeeEEEE
Confidence 6 345667778773 33 334567899999999999999999999886 7899999999999999988877777
Q ss_pred Ee
Q 010144 474 VM 475 (517)
Q Consensus 474 ~~ 475 (517)
..
T Consensus 317 ~~ 318 (379)
T TIGR01835 317 LV 318 (379)
T ss_pred Ec
Confidence 64
|
This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event. |
| >PLN02577 hydroxymethylglutaryl-CoA synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=316.42 Aligned_cols=313 Identities=16% Similarity=0.203 Sum_probs=233.0
Q ss_pred CCCceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhh
Q 010144 81 RGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSE 160 (517)
Q Consensus 81 ~~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~e 160 (517)
+|++|+|.++|.|+|+. +|+++++.+..+. +++ |+ ++||++|++.... .+|++.+|
T Consensus 1 ~~~~vgI~gig~Y~P~~---~v~n~eLa~~~g~----~~~------~~--~~GI~~r~~ava~---~~Ed~~tm------ 56 (459)
T PLN02577 1 MPKNVGILAMEVYFPPT---CVQQEALEAHDGV----SKG------KY--TIGLGQDCMAFCT---DVEDVISM------ 56 (459)
T ss_pred CCCccEEEEEEEeCCCe---EEcHHHHHHHhCC----CHH------HH--hhccceeEeccCC---CCCCHHHH------
Confidence 47899999999999999 9999999988664 233 44 5899999874211 12544455
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHH---HHcCCCCCeeEEEecCCcchHHHHHHHHHHHH
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRII---NRYNLRNDIKAFNLSGMGCSASVVAVDLVQQL 236 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~---~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~l 236 (517)
+++|++++|+++|++|++||+||++| |+++..|++|+.|+ +.||.+ ++.+||+++ +|+||+.||++|.++
T Consensus 57 ----A~~AA~~aL~~agid~~~IdllivaTeT~~d~~ps~A~~v~~ll~~LG~~-~~~afDi~~-AC~G~~~AL~~A~~~ 130 (459)
T PLN02577 57 ----SLTVVKSLLEKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEESGNT-DIEGVDSTN-ACYGGTAALLNCVNW 130 (459)
T ss_pred ----HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCchHHHHHHHHHHhCCC-CcEEeehhh-hhHHHHHHHHHHHHH
Confidence 79999999999999999999999985 67788999999886 788876 899999998 999999999999999
Q ss_pred HHcCC--CCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeeee-ccCcccccce
Q 010144 237 FRTYK--NKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHF-GSNDEAYECC 313 (517)
Q Consensus 237 L~ag~--~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~-~td~~~~~~~ 313 (517)
++++. .++||||++|..+.. .. ..+ ..+||||+|+||+.++.. .+.... ++.+.....+
T Consensus 131 i~sg~~~~~~aLVV~aD~a~~~-~~-~~e------~t~GdGA~A~lv~~~~~~----------~l~~~~~g~~~~~~~Df 192 (459)
T PLN02577 131 VESSSWDGRYGLVVAADSAVYA-EG-PAR------PTGGAGAVAMLVGPNAPI----------VFESKYRGSHMAHVYDF 192 (459)
T ss_pred HHcCCCCCCeEEEEEechhhcc-CC-CCC------CCCCcceEEEEEccCCCc----------eeecccccccCcccchh
Confidence 99986 499999999997752 11 122 346999999999965421 111111 1222111223
Q ss_pred eeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhh------CCCCC
Q 010144 314 MQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVL------GAGLN 387 (517)
Q Consensus 314 ~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~------g~~~d 387 (517)
+.|.... ...+|+|...+.+++..+.+.+.+.+ ++. |+.+
T Consensus 193 ~rP~~~~--------------------------~~~~vdG~~s~~~yl~~~~~~~~~~~-------~k~~~~~~~g~~~- 238 (459)
T PLN02577 193 YKPDLAS--------------------------EYPVVDGKLSQTCYLMALDSCYKRFC-------EKYEKLEGKQFSI- 238 (459)
T ss_pred cccCCCC--------------------------CceEEcchHHHHHHHHHHHHHHHHHH-------HHhhcccccCCCH-
Confidence 3332100 01244556677777777777776665 333 6664
Q ss_pred cccccceeecCCCChHHHHHHHhhCCCC----------------------------------------------cccchh
Q 010144 388 LKAGIEHFCLHPGGRAVIDGTGKGLELD----------------------------------------------EYDLEP 421 (517)
Q Consensus 388 ~~~did~~~~Hq~~~~il~~i~~~Lgl~----------------------------------------------~e~~~~ 421 (517)
+|||++|+||+..++...-.+.|.+. .+|+.|
T Consensus 239 --~d~d~~vfHqP~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~p 316 (459)
T PLN02577 239 --SDADYFVFHAPYNKLVQKSFARLVYNDFQRNASSVDEDAKEKLAPFAGLSSDESYQNRDLEKVSQQVAKPLYDAKVQP 316 (459)
T ss_pred --HHcCEEEecCCccchhHHHHHHHhhhhhhhccccccchhhhccccccccchhhccccchHHHHHHHhhHHHHHHhhcc
Confidence 89999999999877766554444311 157777
Q ss_pred hhhcccCcccchhhHHHHHHHHHHHcCC-CCCCCEEEEEEechhHHhheeeeEEecc
Q 010144 422 ARMALHRFGNTSAGGLWYVLGYMEAKKR-LKKGDRILMISLGAGFKCNNCVWEVMKD 477 (517)
Q Consensus 422 S~~~l~~~GNtsSASi~~~L~~~~~~g~-i~~Gd~VlliafG~G~t~~a~vlr~~~~ 477 (517)
|...-++.||+.++|+++.|..+++... ..+|+||.++|+|+|.......+++..+
T Consensus 317 s~~~~~~vGN~YTaSlyl~L~SlL~~~~~~~~G~rIg~fSYGSG~~se~fs~~v~~~ 373 (459)
T PLN02577 317 TTLIPKQVGNMYTASLYAALASLVHNKHSELAGKRILMFSYGSGLTATMFSLRLHEG 373 (459)
T ss_pred HhHHHHhcCcccchHHHHHHHHHHhhccccCCCCEEEEEeecCCccceeEEEEEeCC
Confidence 7778899999999999999999997542 4599999999999999888888877643
|
|
| >COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-33 Score=283.74 Aligned_cols=315 Identities=17% Similarity=0.215 Sum_probs=245.1
Q ss_pred CceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhhHH
Q 010144 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMD 162 (517)
Q Consensus 83 ~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~ea~ 162 (517)
+.++|.+++.|+|.. ++..+++.+..+. +++ ++..-.|++++.+.+.. |+..+|
T Consensus 1 ~~iGI~~~g~y~p~~---~i~~~ela~~~g~----d~~------k~~~gl~~~e~sv~~~~-----ED~vTm-------- 54 (377)
T COG3425 1 MMIGIVGIGAYIPRY---RIKLEELARAWGV----DPE------KIKKGLGVEEKSVPPWD-----EDAVTM-------- 54 (377)
T ss_pred CccccceEEEeccce---EeeHHHHHhhcCC----ChH------HhhhccccccccCCCCc-----hhHHHH--------
Confidence 368999999999999 9999999988764 232 67778899999876553 544445
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCC
Q 010144 163 EIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYK 241 (517)
Q Consensus 163 ~la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~ 241 (517)
+++|++++|.++++||++|+.|+++| |..+...+.|..|++.||+.+++.++|+.+ +|.++..||+.|.+++.+++
T Consensus 55 --aveAA~~~l~r~~~D~~~Ig~v~vgTES~~d~~K~~at~v~~~lg~~~~~~~~d~~~-AC~agT~aL~~a~~~v~s~~ 131 (377)
T COG3425 55 --AVEAARNALKRADIDPSKIGAVIVGSESGPDAVKPTATIVAEALGLNPSARAADVEF-ACYAGTAALQAAIGWVESGM 131 (377)
T ss_pred --HHHHHHHHHhccCCCHHHCceEEEecCCCcccccchHHHHHHHhCCCCceehhhHHH-HHHHHHHHHHHHHHHHHcCC
Confidence 79999999999999999999999986 566778999999999999999999999998 99999999999999999999
Q ss_pred CCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccccceeeccccCC
Q 010144 242 NKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQG 321 (517)
Q Consensus 242 ~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~~~~~~~~g 321 (517)
.+++|||++|+.... + .+.- -...|+||+|+|++..+... ..+ ..+...+++ ....++|.+.
T Consensus 132 ~~~~LvI~sD~a~~~--~-~~~~----E~t~GAGavA~lIg~n~~~~----a~~---~~~~syt~d--~~DFwRp~~~-- 193 (377)
T COG3425 132 ISYGLVIGADTAQYA--P-GDAL----EYTAGAGAVAFLIGKNPPIV----AEF---EGTGSYTTD--TPDFWRPDGQ-- 193 (377)
T ss_pred ccceEEEeehhhccC--C-Cccc----CccCCCceEEEEEccCCCeE----EEe---cCceEEecC--CCcccccCCC--
Confidence 999999999997541 1 2211 35689999999999864321 111 111122221 1224444321
Q ss_pred CCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCC
Q 010144 322 HPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGG 401 (517)
Q Consensus 322 ~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~ 401 (517)
..|.+.++. + .+.| ...+....++.. ++.|++| +|+|++|+|+++
T Consensus 194 --------~yp~~dg~~-----s---------~~~Y---~~~~~~a~~~~~-------~k~gls~---~dfdy~vfH~P~ 238 (377)
T COG3425 194 --------PYPYVDGRF-----S---------EPAY---FKHVENAAKGYM-------EKTGLSP---DDFDYIVFHQPN 238 (377)
T ss_pred --------cccccCcee-----c---------HHHH---HHHHHHHHHHHH-------HHhCCCh---hhhCeEEecCCC
Confidence 112222221 1 1122 123344445544 6888886 899999999999
Q ss_pred hHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEEEechhHHhheeeeEEeccCCC
Q 010144 402 RAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLED 480 (517)
Q Consensus 402 ~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~VlliafG~G~t~~a~vlr~~~~~~~ 480 (517)
.++....++.++.+.+++.++....++.||+.|+|+++.|+.+++... .+||||++++||+|........+....++.
T Consensus 239 ~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~L~~a~-~~G~rIl~~SYGSGa~s~~fs~~v~~~~~~ 316 (377)
T COG3425 239 GKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLASLLDNAK-LPGDRILLFSYGSGAGSEAFSITVTDGIEE 316 (377)
T ss_pred CchHHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHHHHHHhhcC-CCCCEEEEEeeCCCcceeEEEEEecccHHH
Confidence 999999999999999999998888889999999999999999998655 699999999999999888888888776654
|
|
| >TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-32 Score=290.79 Aligned_cols=319 Identities=17% Similarity=0.229 Sum_probs=220.2
Q ss_pred ceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEe--ccCCCcCCCCCCccHHHhHhhH
Q 010144 84 CCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETY--GPRNVVEGREESPSLAEAFSEM 161 (517)
Q Consensus 84 ~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~--~~~~~~~~~~~~~~m~~~~~ea 161 (517)
+|+|.+++.|+|+. +++++++.+..+. +++ |+ .+||++|++ .++ +|+..+|
T Consensus 1 ~vgI~~ig~y~P~~---~v~~~eLa~~~g~----~~~------k~--~~GI~~rr~av~~~-----~Ed~~tm------- 53 (454)
T TIGR01833 1 DVGILALEIYFPSQ---YVDQAELEKYDGV----SAG------KY--TIGLGQTKMGFCTD-----REDINSL------- 53 (454)
T ss_pred CcEEEEEEEeCCCe---EEcHHHHHHhcCC----CHH------Hh--eechhheecccCCC-----CCCHHHH-------
Confidence 58999999999999 9999999887653 232 33 589999985 333 2444445
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHc---CCCCCeeEEEecCCcchHHHHHHHHHHHHH
Q 010144 162 DEIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRY---NLRNDIKAFNLSGMGCSASVVAVDLVQQLF 237 (517)
Q Consensus 162 ~~la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~L---Gl~~~~~~~dl~~mgCsggl~AL~lA~~lL 237 (517)
+..|++++|++++++|++||+||++| |+++..|+.+++|++.| |.+ ++.+||+.+ +|+|++.||++|.+++
T Consensus 54 ---a~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~sps~a~~v~~lL~~lG~~-~~~~fDi~~-AC~G~t~AL~~A~~~i 128 (454)
T TIGR01833 54 ---CLTVVSKLMERYNIDYNQIGRLEVGTETIIDKSKSVKTVLMQLFEESGNT-DVEGIDTTN-ACYGGTAALFNAINWI 128 (454)
T ss_pred ---HHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCchHHHHHHHHHhcCCC-CceEEeccc-cchhHHHHHHHHHHHH
Confidence 79999999999999999999999985 78899999999999855 454 899999997 9999999999999999
Q ss_pred HcCC--CCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccccceee
Q 010144 238 RTYK--NKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQ 315 (517)
Q Consensus 238 ~ag~--~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~~~ 315 (517)
+++. .++||||++|+.-. .+.+. ..++||||+||||++++.- .++. ++..+++..... .++
T Consensus 129 ~s~~~~~~~aLVV~sDia~y-----~~~~~---~~t~GaGAvAmLv~~~~~~----~~~~-~~~~~~~~~~~D----F~r 191 (454)
T TIGR01833 129 ESSSWDGRYALVVAGDIAVY-----AKGNA---RPTGGAGAVAMLIGPNAPI----VFER-GLRGSHMQHAYD----FYK 191 (454)
T ss_pred HcCCcCCCeEEEEEeccccc-----cCCCe---eeccccceEEEEeccCccc----eecC-ccceEEEeeccc----ccC
Confidence 9985 59999999999443 12221 3478999999999977641 1111 112233322222 233
Q ss_pred ccccCCCCCcccchhHHHHHHHH-HhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccce
Q 010144 316 VEDQQGHPGFRLTKQLTKAAALA-FTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEH 394 (517)
Q Consensus 316 ~~~~~g~~g~~ls~~~~~~~~~~-~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~ 394 (517)
|.... +.|.+.+.. ...+++.+ .+.|......+.+.+.++. .+.+..+ +|+|+
T Consensus 192 P~~~~---------~~p~vdg~~S~~~Yl~a~-------~~~y~~y~~~~~~a~~~~~-------~~~~~~~---~dfd~ 245 (454)
T TIGR01833 192 PDLAS---------EYPVVDGKLSIQCYLSAL-------DRCYKSYCKKIEKQWGKSG-------GDRKFTL---NDFDY 245 (454)
T ss_pred CCCCC---------cccccCCccCHHHHHHHH-------HHHHHHHHHHHHHhhhhhc-------cccCCCH---hHcCE
Confidence 32100 011111110 01122221 3344333333333322221 1234554 89999
Q ss_pred eecCCCChHHHHHH-HhhC---------------------------------------------CCCcccchhhhhcccC
Q 010144 395 FCLHPGGRAVIDGT-GKGL---------------------------------------------ELDEYDLEPARMALHR 428 (517)
Q Consensus 395 ~~~Hq~~~~il~~i-~~~L---------------------------------------------gl~~e~~~~S~~~l~~ 428 (517)
+|+|++..++...- .+.+ +...+++.||...-++
T Consensus 246 ~~fH~P~~km~~ka~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~ 325 (454)
T TIGR01833 246 MVFHSPYCKLVQKSLARLLYNDFLRNPSSIDTALYEGLEALSTLKLEDTYFDRDLEKAFMKASKELFDKKTKPSLLVPNQ 325 (454)
T ss_pred EeccCCcccHHHHHHHHHHHhhhhhccccccchhhcccchhhccccccccchhhHHHHHHhhhhhhHHHhhcchhHHHHh
Confidence 99999976665443 2221 1123677777777789
Q ss_pred cccchhhHHHHHHHHHHHcCC--CCCCCEEEEEEechhHHhheeeeEEecc
Q 010144 429 FGNTSAGGLWYVLGYMEAKKR--LKKGDRILMISLGAGFKCNNCVWEVMKD 477 (517)
Q Consensus 429 ~GNtsSASi~~~L~~~~~~g~--i~~Gd~VlliafG~G~t~~a~vlr~~~~ 477 (517)
.||+.++|+++.|..+++..+ ...|+||.++++|+|........++...
T Consensus 326 vGN~YtaSlyl~L~Sll~~~~~~~~~g~ri~~fSYGSG~~se~fs~~v~~~ 376 (454)
T TIGR01833 326 VGNMYTASLYGCLASLLSSKSAQELAGKRVGMFSYGSGLAASMFSLRVSQD 376 (454)
T ss_pred cCchhhhHHHHHHHHHHhhCCccccCCCEEEEEeccCCcceeeEEEEEeCC
Confidence 999999999999999997543 4579999999999999888888877654
|
Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes. |
| >PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-31 Score=258.92 Aligned_cols=203 Identities=22% Similarity=0.283 Sum_probs=161.6
Q ss_pred cCCCceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCC--hHHHHHHHHHHHHhCCceeEeccCCCc-C-CC----CCC
Q 010144 80 KRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLG--LEEYRFLLKNMVSSGIGEETYGPRNVV-E-GR----EES 151 (517)
Q Consensus 80 ~~~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~--~~~~~~~~ri~~~sGI~~r~~~~~~~~-~-~~----~~~ 151 (517)
+.+.+.+|.++|+..|++ +++++++.+.+.+....+ .+..++++++++++||++||..-+..+ . .+ ...
T Consensus 10 ~~~g~A~Il~IgTA~P~~---~~~Q~~~~e~~~~~~~~~~~~~~~~~l~ri~~~sgI~~R~~vl~~~~~~~~p~~~~~~~ 86 (226)
T PF00195_consen 10 RSPGPAYILSIGTAVPPH---RITQEEIAEFFFRITHSDDLPDLRRKLRRIFENSGIEKRHSVLPEEWLDEYPSFWDFAD 86 (226)
T ss_dssp S-SSSEEEEEEEEE-SSE---EEEGCCHHHHHHHHTT-TTGHHHHHHHHHHHHHST-SEEEESS-HHHHHTSGGGHSSSS
T ss_pred cCCCCeEEEEEEEeCCCc---eecHHHHHHHHHHHhcccchhHHHHHHHhhhhccccceeccccchhhhhcCcchhhccC
Confidence 467789999999999999 999999998754332222 245678889999999999997643111 0 00 111
Q ss_pred c----cHHHhHhhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHH
Q 010144 152 P----SLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASV 227 (517)
Q Consensus 152 ~----~m~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl 227 (517)
+ .|+.+.+++.+|+.+|+++||+++|++++|||+||++|+.+...|++..+|+++||+++++..+.|.+|||+||+
T Consensus 87 ps~~~R~~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~~i~~~GC~gg~ 166 (226)
T PF00195_consen 87 PSLAERNALYAEEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQRTPIFGMGCAGGA 166 (226)
T ss_dssp S-HHHHHHHHHHHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSEEEEEES-GGGHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcCCCchhHHHHhcCCCCCCcEEEEEeccchhhHH
Confidence 2 366789999999999999999999999999999999877778899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCEEEEEEecCCCCCCCCC--CCccccccccccccceEEEEEeecc
Q 010144 228 VAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCG--REKSMMLSNILFRSGGCSMLLTNNR 285 (517)
Q Consensus 228 ~AL~lA~~lL~ag~~~~aLVVs~E~~s~~~~~~--~dr~~lv~~~lfGDGAAAvLLs~~~ 285 (517)
.||.+|+++.+++|..+||||+.|.+|.+|..+ .++++++.+++|||||||+||+.+|
T Consensus 167 ~~L~~A~~~~~~~p~a~VLvv~vElcsl~~~~~~~~~~~~lv~~aLFgDGaAA~vv~~dP 226 (226)
T PF00195_consen 167 AGLRRAKDIARANPGARVLVVCVELCSLHFQAPNDDSLDNLVANALFGDGAAAVVVGADP 226 (226)
T ss_dssp HHHHHHHHHHHHSTT-EEEEEEEEEGGGTHHHCCTTSHHHHHHHHHB-EEEEEEEEESS-
T ss_pred HHHHHHHHHHhCCccceEEEEEEEeeEEEEecCCcccHHHHhHHhhhcCCceEEEEccCC
Confidence 999999999999999999999999999877543 3467889999999999999999764
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A .... |
| >cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=243.83 Aligned_cols=238 Identities=13% Similarity=0.160 Sum_probs=186.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHc
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~a 239 (517)
..+|+.+|++++|+++|++++|||.||++++ +++..|+.+.+|++++|++ +.+++++.+ +|++++.||++|.++|++
T Consensus 7 ~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~-~~~~~~i~~-~C~s~~~al~~A~~~i~~ 84 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-GGPAYSVNQ-ACATGLTALALAVQQVQN 84 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCC-CCCcceecc-HhHHHHHHHHHHHHHHHC
Confidence 4577899999999999999999999999854 6666899999999999997 789999996 999999999999999999
Q ss_pred CCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccccceeecccc
Q 010144 240 YKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQ 319 (517)
Q Consensus 240 g~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~~~~~~~ 319 (517)
+..+++||+++|. ++|||||+|+||++++....+...-+..+.......++...
T Consensus 85 g~~~~~lv~~~e~-----------------~~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~--------- 138 (254)
T cd00327 85 GKADIVLAGGSEE-----------------FVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASM--------- 138 (254)
T ss_pred CCCCEEEEEecce-----------------eeecceEEEEEECcHHHHHHCCCceEEEEEEEEEcCCCCCC---------
Confidence 9999999999997 57999999999998654211000000112222111111100
Q ss_pred CCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCC
Q 010144 320 QGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHP 399 (517)
Q Consensus 320 ~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq 399 (517)
..... ...+.+.+.+++ +++|+.+ +|||+|++|+
T Consensus 139 ----~~~~~--------------------------------~~~~~~~i~~~l-------~~ag~~~---~did~~~~h~ 172 (254)
T cd00327 139 ----VPAVS--------------------------------GEGLARAARKAL-------EGAGLTP---SDIDYVEAHG 172 (254)
T ss_pred ----CCCCC--------------------------------hHHHHHHHHHHH-------HHcCCCH---HHCCEEEccC
Confidence 00000 011234445555 6888885 8999999999
Q ss_pred CChHHHHHHHhhCCCCcccch--hhhhcccCcccchhhHHHHHHHHHHHcCCCC-------CCCEEEEEEechhHHhhee
Q 010144 400 GGRAVIDGTGKGLELDEYDLE--PARMALHRFGNTSAGGLWYVLGYMEAKKRLK-------KGDRILMISLGAGFKCNNC 470 (517)
Q Consensus 400 ~~~~il~~i~~~Lgl~~e~~~--~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~-------~Gd~VlliafG~G~t~~a~ 470 (517)
.+..+.+.+++.+++++++.. +...+..++||+++||.++.|+++++..+.+ +||++++.++|.|++++++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~g~Gg~~~~~ 252 (254)
T cd00327 173 TGTPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTNAAV 252 (254)
T ss_pred CcCccccHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHhCCCcCCCCCCcCEEEEeeEcCCCcceEE
Confidence 999999999999999887763 3356789999999999999999998766655 8999999999999999998
Q ss_pred ee
Q 010144 471 VW 472 (517)
Q Consensus 471 vl 472 (517)
++
T Consensus 253 ~l 254 (254)
T cd00327 253 VL 254 (254)
T ss_pred EC
Confidence 75
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. |
| >cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-26 Score=236.38 Aligned_cols=254 Identities=15% Similarity=0.176 Sum_probs=185.0
Q ss_pred HHHHHHHHHHHHHHhCCCC----CCCcCEEEEeec-CCCC---------------------CCcHHHHHHHHcCCCCCee
Q 010144 161 MDEIIFDTLDKLFARTDIS----PSEIDVLVVNVS-LFSP---------------------APSLTSRIINRYNLRNDIK 214 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~----p~dID~LI~a~s-~~~~---------------------~Ps~a~~I~~~LGl~~~~~ 214 (517)
..+|+++|++++|+++|++ +++||.||++++ +.+. .|+.+.+|+..||+ +.+
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~g~ 88 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGI--HGP 88 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCC--CCC
Confidence 3567899999999999999 999999998764 3332 78889999999999 468
Q ss_pred EEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCCCCC----------CCC--c--cccccccccccceEEEE
Q 010144 215 AFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYC----------GRE--K--SMMLSNILFRSGGCSML 280 (517)
Q Consensus 215 ~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~~~~----------~~d--r--~~lv~~~lfGDGAAAvL 280 (517)
++++.+ +|++++.||++|.++|++|..+++||+++|..+..+.. ... + +.....++|||||+|+|
T Consensus 89 ~~~v~~-~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaaA~v 167 (332)
T cd00825 89 AYDVSA-ACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALV 167 (332)
T ss_pred cccccc-HhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEEEEE
Confidence 899996 99999999999999999999999999999987653211 000 0 11123789999999999
Q ss_pred Eeecccccccchhhc-cceeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHH
Q 010144 281 LTNNRALKHKAILKL-NCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRY 359 (517)
Q Consensus 281 Ls~~~~~~~~~~~~l-~~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~ 359 (517)
|++.+....+ +-.+ ..+.......++..... + . +
T Consensus 168 L~~~~~a~~~-~~~~~~~i~~~~~~~~~~~~~~------------~--~---~--------------------------- 202 (332)
T cd00825 168 VEELEHALAR-GAHIYAEIVGTAATIDGAGMGA------------F--A---P--------------------------- 202 (332)
T ss_pred ECcHHHHHHC-CCeEEEEEEEEEEccCCCCCCC------------C--C---c---------------------------
Confidence 9986542110 0000 01122222222111000 0 0 0
Q ss_pred HHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHHHHHHhhCCCCcccc--hhhhhcccCcccchhhHH
Q 010144 360 VIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDL--EPARMALHRFGNTSAGGL 437 (517)
Q Consensus 360 ~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il~~i~~~Lgl~~e~~--~~S~~~l~~~GNtsSASi 437 (517)
....+.+.+.+++ +++|+++ +|||++++|+.+..+.+.+++.++++.++. .+...+..+|||+++||.
T Consensus 203 ~~~~~~~~i~~al-------~~agl~~---~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~ 272 (332)
T cd00825 203 SAEGLARAAKEAL-------AVAGLTV---WDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAV 272 (332)
T ss_pred CHHHHHHHHHHHH-------HHcCCCH---hHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhH
Confidence 0011234455555 6889996 899999999999999999998888776542 122578899999999999
Q ss_pred HHHHHHHHHcCCCC-------------------------CCCEEEEEEechhHHhheeee
Q 010144 438 WYVLGYMEAKKRLK-------------------------KGDRILMISLGAGFKCNNCVW 472 (517)
Q Consensus 438 ~~~L~~~~~~g~i~-------------------------~Gd~VlliafG~G~t~~a~vl 472 (517)
++.|..+++..+.+ +|++++++++|.|.+++++++
T Consensus 273 ~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 273 VLAVDEAVLMLEHGFIPPSIHIEELDEAGLNIVTETTPRELRTALLNGFGLGGTNATLVL 332 (332)
T ss_pred HHHHHHHHHHHhcCccCCCCCCCCCCcccCcccCCCCCCCCCEEEEeeecCCCeeEEEeC
Confidence 99999998765555 789999999999999999875
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). |
| >PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.6e-21 Score=160.16 Aligned_cols=89 Identities=27% Similarity=0.449 Sum_probs=78.5
Q ss_pred hhhCCCCCcccccceeecCCCChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEE
Q 010144 380 AVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMI 459 (517)
Q Consensus 380 ~~~g~~~d~~~did~~~~Hq~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~Vlli 459 (517)
+++|+++ +|||+|++||+|.++++.+++.+|++++++ +.++++|||++|||+|++|++++++|++++||+|+++
T Consensus 2 ~~~g~~~---~did~~i~hq~~~~~~~~~~~~lgi~~~~~---~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~ 75 (90)
T PF08541_consen 2 ERAGLSP---DDIDHFIPHQASKKILDSIAKRLGIPPERF---PDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLV 75 (90)
T ss_dssp HHTT--G---GGESEEEE-SSSHHHHHHHHHHHTS-GGGB---E-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEE
T ss_pred ccccCCH---HHCCEEEeCCCCHHHHHHHHHHcCCcHHHH---HHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEE
Confidence 6788986 999999999999999999999999999999 6789999999999999999999999999999999999
Q ss_pred EechhHHhheeeeEE
Q 010144 460 SLGAGFKCNNCVWEV 474 (517)
Q Consensus 460 afG~G~t~~a~vlr~ 474 (517)
++|+|++|+++++||
T Consensus 76 ~~G~G~~~~~~~~~~ 90 (90)
T PF08541_consen 76 GFGAGFSWGAAVLRW 90 (90)
T ss_dssp EEETTTEEEEEEEE-
T ss_pred EEEhhheeEEEEEEC
Confidence 999999999999997
|
3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B .... |
| >PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase | Back alignment and domain information |
|---|
Probab=99.79 E-value=6e-19 Score=164.57 Aligned_cols=168 Identities=20% Similarity=0.261 Sum_probs=124.4
Q ss_pred CCCceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhh
Q 010144 81 RGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSE 160 (517)
Q Consensus 81 ~~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~e 160 (517)
||++|+|.+++.|.|.. .++.+++.+..+.. +. |+....|.++.++.++. |+..+|
T Consensus 1 ~p~~VGI~~i~~y~p~~---~v~~~~La~~~g~d----~~------K~~~glgq~~~av~~~~-----ED~vTm------ 56 (174)
T PF01154_consen 1 RPQNVGIDAIEFYIPRY---YVDQEELAEARGVD----PG------KYTIGLGQEKMAVPPPD-----EDIVTM------ 56 (174)
T ss_dssp --SSEEEEEEEEE-ESE---EEEHHHHHHHTTS-----TC------HHHTTT--SEEEE--TT-----S-HHHH------
T ss_pred CCccccEeEEEEecCce---EecHHHHHHHhCCC----HH------HhhhhcCeeEEEeCCCc-----ccHHHH------
Confidence 79999999999999999 99999999876542 32 44433444555665543 544455
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCC--CCCeeEEEecCCcchHHHHHHHHHHHHH
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNL--RNDIKAFNLSGMGCSASVVAVDLVQQLF 237 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl--~~~~~~~dl~~mgCsggl~AL~lA~~lL 237 (517)
+..|++++|++.+++|++|+.|+++| |..+...+.+.+|++.||+ +.+|..+|+.+ +|.|+..||+.|.+++
T Consensus 57 ----A~nAa~~ll~~~~id~~~Ig~l~vgTES~vD~sKs~~t~v~~ll~~s~~~~~~~~e~k~-ACygGTaAL~~a~~~v 131 (174)
T PF01154_consen 57 ----AANAAKPLLDRYNIDPDDIGRLIVGTESGVDKSKSISTYVHQLLGLSGNPDCRGVEMKQ-ACYGGTAALQNAVNWV 131 (174)
T ss_dssp ----HHHHHHTTHHHHT-HHHHEEEEEEE-SS-SBSSS-HHHHHHHHTTTTT-SSSEEEEEES-GGGHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHcCCCHHHccEEEEeccccccccccHHHHHHHHhCcCCCCceeeeehhh-hhHHHHHHHHHHHHHH
Confidence 79999999999999999999999997 5555688899999999999 55789999998 9999999999999999
Q ss_pred HcCC--CCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecc
Q 010144 238 RTYK--NKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNR 285 (517)
Q Consensus 238 ~ag~--~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~ 285 (517)
.+++ .+++|||++|..... .+.. ...-|-||+|+|++++.
T Consensus 132 ~s~~~~g~~aLVVasDiA~y~--~g~~------e~TqGAGAVAmLi~~na 173 (174)
T PF01154_consen 132 ASSPWDGRKALVVASDIARYD--LGSA------EPTQGAGAVAMLIGPNA 173 (174)
T ss_dssp CSTTSTTEEEEEEEEEEE--S--TTTT------GGG-EEEEEEEEEECS-
T ss_pred hcCCCCCCeEEEEeccccccC--CCCc------cccccceeEEEEecCCC
Confidence 9975 579999999997542 1111 24579999999999764
|
Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A .... |
| >PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.6e-18 Score=159.85 Aligned_cols=117 Identities=23% Similarity=0.355 Sum_probs=91.3
Q ss_pred CcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChH
Q 010144 324 GFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRA 403 (517)
Q Consensus 324 g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~ 403 (517)
.+.+++++|....++++. .+.+++ ++.|+.. .|+.+|++|++|++
T Consensus 27 ~~~Ls~~vP~~i~~~i~~-------------------------~~~~~L-------~~~g~~~---~~~~~wavHPGG~~ 71 (151)
T PF02797_consen 27 HFILSKEVPDLISDNIPP-------------------------FVEDLL-------ARHGLSD---WDILFWAVHPGGRK 71 (151)
T ss_dssp EEEE-TTHHHHHHHHHHH-------------------------HHHHHH-------HGGTCCS---GGGSEEEEE-SSHH
T ss_pred EEEEhhHhHHHHHHHHHH-------------------------HHHHHH-------hhhcccc---cccceeeecCChHH
Confidence 456899999987654432 233334 4667662 46679999999999
Q ss_pred HHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHH----cCCCCC---CCEEEEEEechhHHhheeeeEEe
Q 010144 404 VIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEA----KKRLKK---GDRILMISLGAGFKCNNCVWEVM 475 (517)
Q Consensus 404 il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~----~g~i~~---Gd~VlliafG~G~t~~a~vlr~~ 475 (517)
|++.+++.|||+++++.+|+++|++||||||+++++.|+++.+ +|.... +++++++|||+|++..++++|.+
T Consensus 72 ILd~v~~~L~L~~~~l~~Sr~vLr~yGNmSSaTVlfVL~~~~~~~~~~g~~~~~~g~~~gv~~afGPG~t~E~~lLr~~ 150 (151)
T PF02797_consen 72 ILDAVEEALGLSPEQLRASREVLREYGNMSSATVLFVLERMRRKSAEEGAPPPGEGGEWGVMLAFGPGLTIEGMLLRSV 150 (151)
T ss_dssp HHHHHHHHHTS-GGGGHHHHHHHHHH-B-GGGHHHHHHHHHHHHHHHTTTSBTTTTBSEEEEEEEETTTEEEEEEEEE-
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCcchHHHHHHHHhhhhhhcccCCCCCCCeEEEEEECCcceEeeEEEeeC
Confidence 9999999999999999999999999999999999999999887 344332 48999999999999999999974
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A .... |
| >KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.77 E-value=1e-17 Score=169.80 Aligned_cols=328 Identities=17% Similarity=0.219 Sum_probs=221.1
Q ss_pred hhcCCCceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHh
Q 010144 78 LQKRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEA 157 (517)
Q Consensus 78 ~~~~~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~ 157 (517)
++..|.+|+|.++.+|+|.. .|++++++..-+.+ .. | -..|+++....-. ..
T Consensus 5 ~~~~p~dvGI~aieiyfP~~---yV~Q~elEk~d~vs----~g------K--ytIGLGq~~Mgfc-------------sd 56 (462)
T KOG1393|consen 5 ASNWPKDVGIIAIEIYFPSQ---YVDQEELEKFDGVS----AG------K--YTIGLGQTQMGFC-------------SD 56 (462)
T ss_pred cccCccccceeEEEEEcCcc---ccChhhHhhcCCcc----cc------c--eEeccCcceeccc-------------Cc
Confidence 45678899999999999999 99999999765432 11 1 1357776544211 11
Q ss_pred HhhHHHHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcC--CCCCeeEEEecCCcchHHHHHHHHHH
Q 010144 158 FSEMDEIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYN--LRNDIKAFNLSGMGCSASVVAVDLVQ 234 (517)
Q Consensus 158 ~~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LG--l~~~~~~~dl~~mgCsggl~AL~lA~ 234 (517)
+++...|...++++++++-+++++.|+.|.|+| |.-.-..|.-..+.+-++ -..++...|..+ +|.||..||--|-
T Consensus 57 rEDi~Sl~ltvvs~Lmery~i~~~~IGRLEVGTETiiDKSKSVKt~LMqLF~~sgNtdIEGiDttn-ACYGGtaALfnav 135 (462)
T KOG1393|consen 57 REDIISLSLTVVSRLMERYNIDPDSIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDIEGIDTTN-ACYGGTAALFNAV 135 (462)
T ss_pred hhhhhhhhHHHHHHHHHHhCCChhhcceEEecceeccccchHHHHHHHHHhhhcCCCccccccccc-cccccHHHHHHHh
Confidence 233344579999999999999999999999986 333446677777777777 556899999998 9999999999999
Q ss_pred HHHHcCC--CCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccccc
Q 010144 235 QLFRTYK--NKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYEC 312 (517)
Q Consensus 235 ~lL~ag~--~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~ 312 (517)
+++.+.. .++||||++|..-. -.++-| ..=|.||.|+|+++...-. |+ .++..+|+.. .|+
T Consensus 136 nWiESssWDGr~aivV~gDIAvY--~~G~aR------pTGGAgAVAmLIgPnApi~----fe-rglr~thM~h---ayD- 198 (462)
T KOG1393|consen 136 NWIESSSWDGRYAIVVCGDIAVY--AKGNAR------PTGGAGAVAMLIGPNAPII----FE-RGLRATHMQH---AYD- 198 (462)
T ss_pred hhhhhcccCCceeEEEEeeEEEe--cCCCCC------CCCCcceEEEEEcCCCceE----ec-ccchhhhhhh---hhh-
Confidence 9999975 68999999998643 223333 4569999999999876531 11 0122333321 122
Q ss_pred eeeccccCCCCCcccchhHHHHHHHH-HhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccc
Q 010144 313 CMQVEDQQGHPGFRLTKQLTKAAALA-FTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAG 391 (517)
Q Consensus 313 ~~~~~~~~g~~g~~ls~~~~~~~~~~-~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~d 391 (517)
+|.|. +..+.|-+.|.. +..+++.+ +..|......+.+... ...+.. .++
T Consensus 199 FyKPd---------l~SEyPvVDGklSi~cYl~Al-------d~cY~~~~kK~~~~~~----------~~~~~~---l~~ 249 (462)
T KOG1393|consen 199 FYKPD---------LLSEYPVVDGKLSIQCYLSAL-------DRCYTVYRKKIAAQWQ----------KSGSDN---LNS 249 (462)
T ss_pred ccCCC---------CCCcCceecCeehHHHHHHHH-------HHHHHHHHHHHHHHhc----------cccCcc---ccc
Confidence 33221 233344443321 11122222 3444444433332221 112233 368
Q ss_pred cceeecCCCChHHHHH-HH-----------------------------------------hhCCCCcccchhhhhcccCc
Q 010144 392 IEHFCLHPGGRAVIDG-TG-----------------------------------------KGLELDEYDLEPARMALHRF 429 (517)
Q Consensus 392 id~~~~Hq~~~~il~~-i~-----------------------------------------~~Lgl~~e~~~~S~~~l~~~ 429 (517)
+|++++|.+--++.+. ++ -...+-.+|+.+|...-.+.
T Consensus 250 fdy~ifHsP~cKlvqKs~arl~ynDf~~~~~~~~~~~~~~~~~~l~~s~~dr~~ek~~~~~s~~~~~~Kt~~sl~~~~~~ 329 (462)
T KOG1393|consen 250 FDYIIFHSPYCKLVQKSLARLLYNDFLLNPSQLPESAGLESTLKLDESYTDRDLEKAFIKISKPIFKKKTKPSLLAPRRN 329 (462)
T ss_pred CCeEEEeCchhhhHHHHHHHhhhhhhhhccccccccccccccccccccccchHHHHHHHHHhHHHHHhhccceeEeeccC
Confidence 9999999987665544 11 12233345777776666799
Q ss_pred ccchhhHHHHHHHHHHHcC--CCCCCCEEEEEEechhHHhheeeeEEeccCCC
Q 010144 430 GNTSAGGLWYVLGYMEAKK--RLKKGDRILMISLGAGFKCNNCVWEVMKDLED 480 (517)
Q Consensus 430 GNtsSASi~~~L~~~~~~g--~i~~Gd~VlliafG~G~t~~a~vlr~~~~~~~ 480 (517)
||+.++|+...|..++... .--.|.+|.+.++|+|....-..+|+..+-+|
T Consensus 330 GNmYTaSly~~l~sll~~~~~d~l~Gkrig~FSYGSGlAAs~fs~~v~~da~p 382 (462)
T KOG1393|consen 330 GNMYTASLYASLASLLSAVPADELAGKRIGMFSYGSGLAASMFSLRVTQDATP 382 (462)
T ss_pred CccccHHHHHHHHHHHhccchhhhhccEEEEEeecCcchhheEEEEecCCCCc
Confidence 9999999999999998865 33479999999999999988888888775554
|
|
| >PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated | Back alignment and domain information |
|---|
Probab=99.77 E-value=2e-17 Score=172.71 Aligned_cols=312 Identities=13% Similarity=0.076 Sum_probs=200.2
Q ss_pred CceEEEEEEEEeCCCCCceecHHHHHHHHHhc-ccCChHHHHHH-----HHHHHHhCCceeEeccCCCcCCCCCCccHHH
Q 010144 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRN-KKLGLEEYRFL-----LKNMVSSGIGEETYGPRNVVEGREESPSLAE 156 (517)
Q Consensus 83 ~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~-~~~~~~~~~~~-----~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~ 156 (517)
++|+|++.|+.-|=. .+.++....++.. .++... .++ ++|..++|+.+|++.
T Consensus 3 ~~v~I~~~g~vs~lG----~~~~~~~aa~ragi~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~---------------- 60 (348)
T PRK06147 3 RALAIVGSGMVTAVG----LDAPSSCAAIRARLDNFQET--RFIDPPGGEWLIGAPVPLPPPWR---------------- 60 (348)
T ss_pred CceEEEecceeecCc----CCHHHHHHHHHccccccccc--ccccCCCCCceEeecCcCCcccC----------------
Confidence 469999999999998 6666655544221 011110 000 012223333222220
Q ss_pred hHhhHHHHHHHHHHHHHHhCC-CCCCCcCEEEEeec------CCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHH
Q 010144 157 AFSEMDEIIFDTLDKLFARTD-ISPSEIDVLVVNVS------LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVA 229 (517)
Q Consensus 157 ~~~ea~~la~~Aa~~aL~~ag-i~p~dID~LI~a~s------~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~A 229 (517)
..+...+|+..|++++|++++ +++++||++|+.++ ++...|.++..+++++|+..+..++++.+ ||++++.|
T Consensus 61 ~~~r~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~~~i~~-~casg~~A 139 (348)
T PRK06147 61 GPERLAEMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGLRLEPGSAVIAR-GRVSGAVA 139 (348)
T ss_pred chHHHHHHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCCCCCCCcccccc-cchHHHHH
Confidence 123446789999999999999 79999999988633 33345567889999999965578899997 99999999
Q ss_pred HHHHHHHHHcCCCCEEEEEEecCCCCC----C------CCCCCccccccccccccceEEEEEeecccccccchhhcccee
Q 010144 230 VDLVQQLFRTYKNKLAIVVSTESMGPN----W------YCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLV 299 (517)
Q Consensus 230 L~lA~~lL~ag~~~~aLVVs~E~~s~~----~------~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~ 299 (517)
|..|.++|++|..+.+||+++|..+.. + ....++.. .++|||||+++||++.+....+ +-+ +.
T Consensus 140 l~~A~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~~~~~~---G~v~GEGA~a~vLe~~~~A~~r-ga~---i~ 212 (348)
T PRK06147 140 LAQARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLTSQNSN---GFIPGEAAAAVLLGRPAGGEAP-GLP---LL 212 (348)
T ss_pred HHHHHHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCCCCCCC---ceeeeceEEEEEEccHhhhhcC-CCc---eE
Confidence 999999999999999999999987651 1 01122222 6899999999999976542111 111 22
Q ss_pred eeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchh
Q 010144 300 RTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPE 379 (517)
Q Consensus 300 ~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~ 379 (517)
....+.+...+. .+...|. .+ ..+.+.++++|
T Consensus 213 a~g~~~~~~~~~---------------~~~~~p~-~g-------------------------~gl~~ai~~AL------- 244 (348)
T PRK06147 213 GLGLGREPAPVG---------------ESEDLPL-RG-------------------------DGLTQAIRAAL------- 244 (348)
T ss_pred EEEEeecCCCcc---------------cCCCCCC-Ch-------------------------HHHHHHHHHHH-------
Confidence 111111111000 0000000 00 01334555666
Q ss_pred hhhCCCCCcccccceeecCCCChHHHHH-----HHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHH--cCCCCC
Q 010144 380 AVLGAGLNLKAGIEHFCLHPGGRAVIDG-----TGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEA--KKRLKK 452 (517)
Q Consensus 380 ~~~g~~~d~~~did~~~~Hq~~~~il~~-----i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~--~g~i~~ 452 (517)
+++|+.| +|||+++.|..+....+. +.+.++-..+... -..+-..+||+++|+-.+.+..... +...-+
T Consensus 245 ~~agl~~---~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~-~~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~ 320 (348)
T PRK06147 245 AEAGCGL---EDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFD-LWHPAECIGEIGAAIGPALLGVALAASRKGYGP 320 (348)
T ss_pred HHcCCCH---HHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCc-eecchHhhcchHHHHHHHHHHHHHHHHHcCcCC
Confidence 6889986 899999999877655433 2334543222221 1346678999999999998876443 234458
Q ss_pred CCEEEEEEechhHHhheeeeEEec
Q 010144 453 GDRILMISLGAGFKCNNCVWEVMK 476 (517)
Q Consensus 453 Gd~VlliafG~G~t~~a~vlr~~~ 476 (517)
|+++++++-.-.-..++++++..+
T Consensus 321 g~~~L~~s~~d~g~r~a~~l~~~~ 344 (348)
T PRK06147 321 GPNVLCHLSDDDGARAALVLEYRR 344 (348)
T ss_pred CCcEEEEecCCCCceEEEEEeccc
Confidence 999999999988888999998643
|
|
| >TIGR02845 spore_V_AD stage V sporulation protein AD | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.9e-16 Score=160.76 Aligned_cols=116 Identities=11% Similarity=0.165 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCC
Q 010144 162 DEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYK 241 (517)
Q Consensus 162 ~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~ 241 (517)
.+|+.+|+++||+++|++++|||.+++++.++ .+..++.++++||+ +.+++.+ +|++++.||.+|..++++|.
T Consensus 51 ~eLa~eAa~~ALekAGL~~~DID~IIvGdl~~--Q~~~As~vA~~LGI----P~fdV~~-ACSTf~~AL~lAa~lI~SG~ 123 (327)
T TIGR02845 51 RKLMEDAVNLALKKANLKKDDVDFFLAGDLLN--QIITANFVARDLGI----PFLGLYG-ACSTSMETLALGAMLVDGGF 123 (327)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEeCCCC--cccHHHHHHHHhCC----CEEEEec-cCHHHHHHHHHHHHHHhCCC
Confidence 56789999999999999999999999987544 34568999999997 4599998 99999999999999999999
Q ss_pred CCEEEEEEecCCCC-----CCC-CC--CCccccccccccccceEEEEEeecccc
Q 010144 242 NKLAIVVSTESMGP-----NWY-CG--REKSMMLSNILFRSGGCSMLLTNNRAL 287 (517)
Q Consensus 242 ~~~aLVVs~E~~s~-----~~~-~~--~dr~~lv~~~lfGDGAAAvLLs~~~~~ 287 (517)
.++||||++|..+. .+. .+ +++.+ ..+|||||+|+||++....
T Consensus 124 ad~VLVV~Ssh~S~AErqfr~p~eyg~q~~~t---a~~tgdGAGA~vl~~~~~~ 174 (327)
T TIGR02845 124 ADRVLAATSSHYATAERQFRYPTEYGVQKPPT---AQWTVTGAGAVLLASTGGG 174 (327)
T ss_pred CCEEEEEEecccchhhhhcccccccccCCCCe---eeEEEcccEEEEEeecCCC
Confidence 99999999998872 111 22 45554 7899999999999987543
|
Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation. |
| >cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.6e-14 Score=152.95 Aligned_cols=314 Identities=12% Similarity=0.057 Sum_probs=183.1
Q ss_pred CceEEEEEEEEeCCCCCceecHHHHHHHHHhcc-cCChHHHHHHHHHHHHhCCceeE--eccCCC--cCCCCCCccHHHh
Q 010144 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNK-KLGLEEYRFLLKNMVSSGIGEET--YGPRNV--VEGREESPSLAEA 157 (517)
Q Consensus 83 ~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~-~~~~~~~~~~~ri~~~sGI~~r~--~~~~~~--~~~~~~~~~m~~~ 157 (517)
++|+|+|+|+..|.. .+.+++.+.+..-. .+.+-. + ++..+...+. .+++.. +..+ +.....
T Consensus 1 ~~i~I~G~g~~~p~g----~~~~~~~~~l~~g~~~~~~~~-----~-~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~ 67 (406)
T cd00834 1 RRVVITGLGAVTPLG----NGVEEFWEALLAGRSGIRPIT-----R-FDASGFPSRIAGEVPDFDPEDYLD---RKELRR 67 (406)
T ss_pred CcEEEECcceeCCCc----CCHHHHHHHHHcCCCeeEECC-----c-ccccCCCccEEEEcCCCChhhcCC---HHHhcc
Confidence 479999999999998 78888887764311 010000 0 0001111111 111110 0000 111111
Q ss_pred HhhHHHHHHHHHHHHHHhCCCCCCCcCE----EEEeecC-C--------------------------CCCCcHHHHHHHH
Q 010144 158 FSEMDEIIFDTLDKLFARTDISPSEIDV----LVVNVSL-F--------------------------SPAPSLTSRIINR 206 (517)
Q Consensus 158 ~~ea~~la~~Aa~~aL~~agi~p~dID~----LI~a~s~-~--------------------------~~~Ps~a~~I~~~ 206 (517)
.....+|+..|+++||+++|++++++|. ++++++. . ...+..+.+|+..
T Consensus 68 ~~~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 147 (406)
T cd00834 68 MDRFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIR 147 (406)
T ss_pred CCHHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHH
Confidence 2345789999999999999999877653 4444321 1 1235678899999
Q ss_pred cCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCC----------------------CCCCCCcc
Q 010144 207 YNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN----------------------WYCGREKS 264 (517)
Q Consensus 207 LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~----------------------~~~~~dr~ 264 (517)
||++ .+++.+.. +|++++.||..|..+|++|..+++||+++|..+.. ..+...+.
T Consensus 148 lgl~--g~~~~v~~-acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~~~ 224 (406)
T cd00834 148 LGLR--GPNYTVST-ACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDR 224 (406)
T ss_pred hCCC--Ccccccch-HHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCCCC
Confidence 9996 47899997 99999999999999999999999999999987610 01111111
Q ss_pred ccccccccccceEEEEEeecccccccchhhcc-ceeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhh
Q 010144 265 MMLSNILFRSGGCSMLLTNNRALKHKAILKLN-CLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNL 343 (517)
Q Consensus 265 ~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~-~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i 343 (517)
...++||||+|+||++.+...++ +-++. .+.......|+.. ...+ + +. +
T Consensus 225 ---~g~~~geGA~a~vL~~~~~A~~~-g~~~~a~i~g~~~~~d~~~---~~~~-----------~---~~--~------- 274 (406)
T cd00834 225 ---DGFVLGEGAGVLVLESLEHAKAR-GAKIYAEILGYGASSDAYH---ITAP-----------D---PD--G------- 274 (406)
T ss_pred ---CCEeeeccEEEEEEecHHHHHHC-CCeEEEEEEEEEecccCCC---CCCC-----------C---CC--c-------
Confidence 25789999999999976542110 11110 1111111222110 0000 0 00 0
Q ss_pred hhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHHH-----HHHhhCCCCccc
Q 010144 344 QVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVID-----GTGKGLELDEYD 418 (517)
Q Consensus 344 ~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il~-----~i~~~Lgl~~e~ 418 (517)
..+.+.+++++ +++|+.+ +|||++.+|..+...-| .+.+.++-..+.
T Consensus 275 ------------------~~~~~~i~~al-------~~agi~~---~dId~v~~h~tgt~~~d~~E~~al~~~~~~~~~~ 326 (406)
T cd00834 275 ------------------EGAARAMRAAL-------ADAGLSP---EDIDYINAHGTSTPLNDAAESKAIKRVFGEHAKK 326 (406)
T ss_pred ------------------HHHHHHHHHHH-------HHcCCCH---HHCCEEecccccCccccHHHHHHHHHHhcccCCC
Confidence 01223445555 6788986 99999999987765444 344455543333
Q ss_pred chhhhhcccCcccchhhHHHHHHHHH---HHcCCCC------------------------CCCEEEEEEechhHHhheee
Q 010144 419 LEPARMALHRFGNTSAGGLWYVLGYM---EAKKRLK------------------------KGDRILMISLGAGFKCNNCV 471 (517)
Q Consensus 419 ~~~S~~~l~~~GNtsSASi~~~L~~~---~~~g~i~------------------------~Gd~VlliafG~G~t~~a~v 471 (517)
+.- ...-..+||+.+|+-...|..+ +++|.+. +-.+++..+||.|-+-.+++
T Consensus 327 ~~v-~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~v 405 (406)
T cd00834 327 VPV-SSTKSMTGHLLGAAGAVEAIATLLALRDGVLPPTINLEEPDPECDLDYVPNEAREAPIRYALSNSFGFGGHNASLV 405 (406)
T ss_pred Cce-eCcchhhccchhhhhHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccCCCCccccccEEEEeeecCCceeeEEE
Confidence 321 2344678999999988777643 4444321 12356677788776555544
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. |
| >PRK08304 stage V sporulation protein AD; Validated | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.2e-14 Score=145.06 Aligned_cols=117 Identities=13% Similarity=0.191 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCC
Q 010144 162 DEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYK 241 (517)
Q Consensus 162 ~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~ 241 (517)
.+|+.+|+++||+++|++++|||++|+++... .+..++.+++.||+ +.+++.+ +|+++..||.+|..++.+|.
T Consensus 57 seLa~eAa~~ALekAGI~~~DID~lI~Gdll~--Q~~sAs~vA~~LGI----Pa~dV~g-ACST~~~AL~lAa~lI~SG~ 129 (337)
T PRK08304 57 RKMMEDAIQQALQKANLKKSDIDYLLAGDLLN--QIISANFAARELGI----PFLGLYG-ACSTMMESLALGSMLIDGGF 129 (337)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEECCCC--CcchHHHHHHHhCC----cEEEEec-cCHHHHHHHHHHHHHHhcCC
Confidence 46789999999999999999999999986543 34678899999986 6899998 99999999999999999999
Q ss_pred CCEEEEEEecCCCCC---CCCC----CCccccccccccccceEEEEEeecccc
Q 010144 242 NKLAIVVSTESMGPN---WYCG----REKSMMLSNILFRSGGCSMLLTNNRAL 287 (517)
Q Consensus 242 ~~~aLVVs~E~~s~~---~~~~----~dr~~lv~~~lfGDGAAAvLLs~~~~~ 287 (517)
.++||||++|..+.- |..+ ..|.. +...+++||+|+||++....
T Consensus 130 ad~VLVV~Ssh~s~aerqfr~P~eyg~qrp~--taqwtvtGAGA~i~~~~~~~ 180 (337)
T PRK08304 130 ADRVLAATSSHFATAERQFRFPTEYGGQRPP--TAQWTVTGAGAVLLSREGSG 180 (337)
T ss_pred CCEEEEEEcchhhhhhhhccCchhccccCCC--cceEEeeccEEEEEecCCCC
Confidence 999999999998762 2222 12221 36899999999999987543
|
|
| >cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=99.59 E-value=6.4e-14 Score=148.35 Aligned_cols=94 Identities=17% Similarity=0.244 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHc
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~a 239 (517)
..+|+.+|+++||+++|++++|||.||++++ +++..|..+..++..+|++++++++++++ +|++++.||.+|..++++
T Consensus 22 ~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~~~v~~-~c~s~~~al~~A~~~I~s 100 (386)
T cd00751 22 ADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTVNR-VCGSGLQAVALAAQSIAA 100 (386)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCchhhhcc-ccHHHHHHHHHHHHHHHC
Confidence 3577899999999999999999999998753 55557888888999999975589999997 999999999999999999
Q ss_pred CCCCEEEEEEecCCCC
Q 010144 240 YKNKLAIVVSTESMGP 255 (517)
Q Consensus 240 g~~~~aLVVs~E~~s~ 255 (517)
|..++|||+++|.+|.
T Consensus 101 G~~~~vLv~g~e~~s~ 116 (386)
T cd00751 101 GEADVVVAGGVESMSR 116 (386)
T ss_pred CCCCeEEEeeeecccc
Confidence 9999999999997643
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >smart00825 PKS_KS Beta-ketoacyl synthase | Back alignment and domain information |
|---|
Probab=99.56 E-value=4.5e-13 Score=143.01 Aligned_cols=253 Identities=13% Similarity=0.108 Sum_probs=159.4
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCcC----EEEEeec-CCCC-------------------CCcHHHHHHHHcCCCCCeeE
Q 010144 160 EMDEIIFDTLDKLFARTDISPSEID----VLVVNVS-LFSP-------------------APSLTSRIINRYNLRNDIKA 215 (517)
Q Consensus 160 ea~~la~~Aa~~aL~~agi~p~dID----~LI~a~s-~~~~-------------------~Ps~a~~I~~~LGl~~~~~~ 215 (517)
....|+..|+++||+++|+++++|| .|+++++ .++. .+..+..|+..+|+++ ++
T Consensus 86 ~~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~g--~~ 163 (424)
T smart00825 86 PQQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLRG--PS 163 (424)
T ss_pred HHHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCCC--Cc
Confidence 3467899999999999999999998 6777643 2211 3457788999999973 78
Q ss_pred EEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCC----------CC------CCCCccccccccccccceEEE
Q 010144 216 FNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN----------WY------CGREKSMMLSNILFRSGGCSM 279 (517)
Q Consensus 216 ~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~----------~~------~~~dr~~lv~~~lfGDGAAAv 279 (517)
+.+.. +|++++.||..|.++|++|..+.+||+++|..... +. .+.|.. -...++||||+|+
T Consensus 164 ~~v~~-acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~--~~g~~~geGAaal 240 (424)
T smart00825 164 VTVDT-ACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDAD--ADGYVRGEGVGVV 240 (424)
T ss_pred ccccc-HhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCCCCCCCCCCCCC--CCcccccceEEEE
Confidence 99997 99999999999999999999999999999974320 01 111111 1257899999999
Q ss_pred EEeecccccccchhhc-cceeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHH
Q 010144 280 LLTNNRALKHKAILKL-NCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFR 358 (517)
Q Consensus 280 LLs~~~~~~~~~~~~l-~~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~ 358 (517)
||++......+ +-.+ ..+......+|+... +. . .|.. +
T Consensus 241 VLe~~e~A~~~-g~~i~a~I~g~~~~~~~~~~-------------~~--~--~~~~--------------------~--- 279 (424)
T smart00825 241 VLKRLSDALRD-GDPILAVIRGSAVNQDGRSN-------------GL--T--APSG--------------------P--- 279 (424)
T ss_pred EEccHHHHHHC-CCeEEEEEEEEEEeCCCCCC-------------CC--C--CcCH--------------------H---
Confidence 99975432111 1111 012222222232110 00 0 0000 0
Q ss_pred HHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHH-----HHHHHhhCCCCc---ccchhhhhcccCcc
Q 010144 359 YVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAV-----IDGTGKGLELDE---YDLEPARMALHRFG 430 (517)
Q Consensus 359 ~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~i-----l~~i~~~Lgl~~---e~~~~S~~~l~~~G 430 (517)
.+.+.+.+++ +.+|+.+ +|||++.+|..+... .+.+.+.+|... .++. --.+-..+|
T Consensus 280 ----~~~~a~~~al-------~~Agl~~---~dId~i~~h~tgt~~~d~~E~~al~~~~~~~~~~~~~~~-v~s~k~~~G 344 (424)
T smart00825 280 ----AQARLIRQAL-------ARAGVDP---ADVDYVEAHGTGTPLGDPIEAEALAAVFGQGRPRDGPLL-LGSVKSNIG 344 (424)
T ss_pred ----HHHHHHHHHH-------HHhCCCH---HHccEEEeeCCCCCCCCHHHHHHHHHHHhccCCCCCceE-EeccccccC
Confidence 0123344555 6889986 899999999655432 234555555321 2221 012345679
Q ss_pred cchhhHHHHHHHHHH---HcCCC--------------------------C------CCCEEEEEEechhHHhheeeeE
Q 010144 431 NTSAGGLWYVLGYME---AKKRL--------------------------K------KGDRILMISLGAGFKCNNCVWE 473 (517)
Q Consensus 431 NtsSASi~~~L~~~~---~~g~i--------------------------~------~Gd~VlliafG~G~t~~a~vlr 473 (517)
|+.+|+-.+.|.... ++|.+ + .-+.++..+||.|-...+++++
T Consensus 345 h~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~gfgg~n~~lvl~ 422 (424)
T smart00825 345 HLEAAAGVAGLIKVVLALRHGTIPPTLHFETPNPHIDLEESPLRVPTEATPWPATGRPRRAGVSSFGFGGTNAHVILE 422 (424)
T ss_pred CcccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcccCceEccCCCcCCCCCCCccEEEEeccCCCCceEEEEEe
Confidence 999998877775532 23321 0 1356788888888777777765
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. |
| >TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.9e-13 Score=143.35 Aligned_cols=94 Identities=18% Similarity=0.294 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHc
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~a 239 (517)
..+|+.+|+++||+++|++++|||.+|+++. ++...|..+..++..+|++.+++++++++ +|++++.||.+|.+++++
T Consensus 21 ~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~-~Casg~~al~~A~~~I~s 99 (386)
T TIGR01930 21 AEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVPAYTVNR-QCASGLQAVILAAQLIRA 99 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCceeeeecc-hhhHHHHHHHHHHHHHHC
Confidence 4577899999999999999999999998753 45555777889999999986689999997 999999999999999999
Q ss_pred CCCCEEEEEEecCCCC
Q 010144 240 YKNKLAIVVSTESMGP 255 (517)
Q Consensus 240 g~~~~aLVVs~E~~s~ 255 (517)
|..+++||+++|.++.
T Consensus 100 G~~~~vLv~g~e~~s~ 115 (386)
T TIGR01930 100 GEADVVVAGGVESMSR 115 (386)
T ss_pred CCCCEEEEEEehhhcc
Confidence 9999999999898653
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt |
| >PRK09051 beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=7.8e-13 Score=140.41 Aligned_cols=94 Identities=18% Similarity=0.201 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCC-CcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHH
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPA-PSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s-~~~~~-Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ 238 (517)
..+|+.+|+++||+++|++|+|||.||++++ ++... +..+..+...+|++++++++++++ +|++|+.|+.+|.++++
T Consensus 27 ~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~V~~-aCaSg~~Al~~A~~~I~ 105 (394)
T PRK09051 27 PTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQETPAFNVNR-LCGSGLQAIVSAAQAIL 105 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCCceEEecc-cchHHHHHHHHHHHHHH
Confidence 3567899999999999999999999999754 44433 345566667789976799999997 99999999999999999
Q ss_pred cCCCCEEEEEEecCCCC
Q 010144 239 TYKNKLAIVVSTESMGP 255 (517)
Q Consensus 239 ag~~~~aLVVs~E~~s~ 255 (517)
+|..+++||+++|.+|.
T Consensus 106 sG~~d~vLvvG~E~mS~ 122 (394)
T PRK09051 106 LGDADVAIGGGAESMSR 122 (394)
T ss_pred cCCCCEEEEEeehhccc
Confidence 99999999999998764
|
|
| >PRK05656 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=7.5e-13 Score=140.58 Aligned_cols=94 Identities=17% Similarity=0.275 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHc
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~a 239 (517)
..+|+.+|++++|+++|++|+|||.+|++++ +....|..+..++..+|++..++++++++ +|++++.|+.+|..++++
T Consensus 26 ~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~p~~~V~~-~Casg~~ai~~A~~~I~s 104 (393)
T PRK05656 26 AVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVPAMTLNK-VCGSGLKALHLAAQAIRC 104 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCcceEEecc-cchhHHHHHHHHHHHHHc
Confidence 3577899999999999999999999999764 33345667888999999985589999997 999999999999999999
Q ss_pred CCCCEEEEEEecCCCC
Q 010144 240 YKNKLAIVVSTESMGP 255 (517)
Q Consensus 240 g~~~~aLVVs~E~~s~ 255 (517)
|..+++||+++|.+|.
T Consensus 105 G~~d~vLv~G~E~ms~ 120 (393)
T PRK05656 105 GDAEVIIAGGQENMSL 120 (393)
T ss_pred CCCCEEEEEEEhhhcc
Confidence 9999999999996653
|
|
| >cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.2e-12 Score=137.05 Aligned_cols=249 Identities=11% Similarity=0.050 Sum_probs=155.0
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCC-cC----EEEEeecC-----------------------CCCC--CcHHHHHHHHcCC
Q 010144 160 EMDEIIFDTLDKLFARTDISPSE-ID----VLVVNVSL-----------------------FSPA--PSLTSRIINRYNL 209 (517)
Q Consensus 160 ea~~la~~Aa~~aL~~agi~p~d-ID----~LI~a~s~-----------------------~~~~--Ps~a~~I~~~LGl 209 (517)
....|+..|+++||+++|+++++ ++ .++++++. .... ...+..|...+|+
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T cd00828 71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLS 150 (407)
T ss_pred HHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCc
Confidence 45678999999999999998766 43 23333321 0111 4567889999999
Q ss_pred CCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCC--------------------CCCCCCccccccc
Q 010144 210 RNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN--------------------WYCGREKSMMLSN 269 (517)
Q Consensus 210 ~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~--------------------~~~~~dr~~lv~~ 269 (517)
+ +-+++.+.+ +|++++.||..|.++|++|..+.+||+++|..+.. ...+.|+.. ..
T Consensus 151 ~-~Gp~~tv~~-aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~~~~~~pfd~~~--~G 226 (407)
T cd00828 151 S-HGPIKTPVG-ACATALEALDLAVEAIRSGKADIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPFDETR--DG 226 (407)
T ss_pred C-CCCCcCccc-HHHHHHHHHHHHHHHHHcCCCCEEEEccccccChHHHHHHHHcCCCCCCCCCCCcccCCCcCCC--Cc
Confidence 3 347899998 99999999999999999999999999999986510 001111111 26
Q ss_pred cccccceEEEEEeecccccccchhhcc-ceeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhccc
Q 010144 270 ILFRSGGCSMLLTNNRALKHKAILKLN-CLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVP 348 (517)
Q Consensus 270 ~lfGDGAAAvLLs~~~~~~~~~~~~l~-~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgp 348 (517)
+++||||+|+||++......+ +-++. .+.......|+... . . +. .+
T Consensus 227 ~~~gEGAaalvLe~~~~A~~r-g~~i~a~i~g~~~~~d~~~~------------~---~----~~-~~------------ 273 (407)
T cd00828 227 FVEAEGAGVLVLERAELALAR-GAPIYGRVAGTASTTDGAGR------------S---V----PA-GG------------ 273 (407)
T ss_pred EEeecceEEEEEeeHHHHHHC-CCeEEEEEEEEEeccCCCCC------------C---C----CC-Ch------------
Confidence 789999999999986543211 11110 11112222222100 0 0 00 00
Q ss_pred ccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHHH-----HHHhhCCCC--cccchh
Q 010144 349 KILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVID-----GTGKGLELD--EYDLEP 421 (517)
Q Consensus 349 l~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il~-----~i~~~Lgl~--~e~~~~ 421 (517)
. .+.+.+.+++ +++|+.| +|||++..|..+....| .+.+.++-. +-.+
T Consensus 274 -----~--------~~~~a~~~Al-------~~Agi~~---~dId~i~~hgtgt~~~D~~E~~ai~~~~~~~~~~~~v-- 328 (407)
T cd00828 274 -----K--------GIARAIRTAL-------AKAGLSL---DDLDVISAHGTSTPANDVAESRAIAEVAGALGAPLPV-- 328 (407)
T ss_pred -----H--------HHHHHHHHHH-------HHcCCCH---HHcCEEecccccCccccHHHHHHHHHHHhccCCCcee--
Confidence 0 1223344555 6889986 89999999976654433 233334322 2223
Q ss_pred hhhcccCcccchhhHHHHHHHHH---HHcCCCCC--------------------------CCEEEEEEechhHHhheee
Q 010144 422 ARMALHRFGNTSAGGLWYVLGYM---EAKKRLKK--------------------------GDRILMISLGAGFKCNNCV 471 (517)
Q Consensus 422 S~~~l~~~GNtsSASi~~~L~~~---~~~g~i~~--------------------------Gd~VlliafG~G~t~~a~v 471 (517)
..+-..+||+.+|+-.+.|... ++++.+.| -.+++..+||.|-.-.+++
T Consensus 329 -~s~K~~~Gh~~~Asg~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~s~gfgG~n~~lv 406 (407)
T cd00828 329 -TAQKALFGHSKGAAGALQLIGALQSLEHGLIPPTANLDDVDPDVEHLSVVGLSRDLNLKVRAALVNAFGFGGSNAALV 406 (407)
T ss_pred -ecccchhccchhhhhHHHHHHHHHHHhcCccCCCCCCCCCCcccccccccCcCccCCCCccEEEEecccCCCcceEEE
Confidence 3566889999999988887653 34443211 1567778888877655554
|
They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues. |
| >PRK06064 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.3e-12 Score=136.57 Aligned_cols=92 Identities=13% Similarity=0.150 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCC--CCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHH
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSP--APSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLF 237 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s-~~~~--~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL 237 (517)
..+|+.+|++++|+++|++++|||.+|++++ ++.. .|..+.+++..+|++ ..+++++++ +|++++.||..|..+|
T Consensus 22 ~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~~-aCasg~~ai~~A~~~I 99 (389)
T PRK06064 22 LRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLA-PIPATRVEA-ACASGGAALRQAYLAV 99 (389)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCC-CCCeeEEeC-CcHHHHHHHHHHHHHH
Confidence 3577899999999999999999999998654 3332 467789999999997 689999997 9999999999999999
Q ss_pred HcCCCCEEEEEEecCCC
Q 010144 238 RTYKNKLAIVVSTESMG 254 (517)
Q Consensus 238 ~ag~~~~aLVVs~E~~s 254 (517)
++|..+++||+++|..+
T Consensus 100 ~sG~~~~vLv~G~e~~s 116 (389)
T PRK06064 100 ASGEADVVLAAGVEKMT 116 (389)
T ss_pred HCCCCCEEEEEEEEecc
Confidence 99999999999999755
|
|
| >PRK09052 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.6e-12 Score=138.22 Aligned_cols=94 Identities=19% Similarity=0.224 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHHHhC-CCCCCCcCEEEEee-cCCCCCCcHHHHHH-HHcCCCCCeeEEEecCCcchHHHHHHHHHHHHH
Q 010144 161 MDEIIFDTLDKLFART-DISPSEIDVLVVNV-SLFSPAPSLTSRII-NRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLF 237 (517)
Q Consensus 161 a~~la~~Aa~~aL~~a-gi~p~dID~LI~a~-s~~~~~Ps~a~~I~-~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL 237 (517)
..+|+.+|++++|+++ |++|+|||.||+++ .++...|...++++ ..+|++..+++++|++ +|++|+.|+.+|..++
T Consensus 31 ~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~~-aCaSg~~Al~~A~~~I 109 (399)
T PRK09052 31 PDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLPNSVGGVTVNR-FCASGLQAVAMAADRI 109 (399)
T ss_pred HHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCCCCCCceeeecc-hhhHHHHHHHHHHHHH
Confidence 4677899999999997 99999999999975 45555566666654 5559974589999997 9999999999999999
Q ss_pred HcCCCCEEEEEEecCCCC
Q 010144 238 RTYKNKLAIVVSTESMGP 255 (517)
Q Consensus 238 ~ag~~~~aLVVs~E~~s~ 255 (517)
++|..+.+||+++|.+|.
T Consensus 110 ~sG~~d~vLv~G~E~mS~ 127 (399)
T PRK09052 110 RVGEADVMIAAGVESMSM 127 (399)
T ss_pred HCCCCCEEEEEEEecccc
Confidence 999999999999998763
|
|
| >PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.48 E-value=7.3e-12 Score=134.32 Aligned_cols=306 Identities=13% Similarity=0.075 Sum_probs=180.5
Q ss_pred CceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCC---------CcCCCCCCcc
Q 010144 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRN---------VVEGREESPS 153 (517)
Q Consensus 83 ~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~---------~~~~~~~~~~ 153 (517)
.+|.|+|+|+..|-. .+.+++.+.+..- ++||..-..++.. +...++. .
T Consensus 11 ~~VvITG~G~vs~~G----~~~~~~~~~L~~G----------------~s~i~~~~~~~~~~~~~~~~g~~~~~~~~--~ 68 (425)
T PRK06501 11 PIVAVTGMGVVTSLG----QGKADNWAALTAG----------------ESGIHTITRFPTEGLRTRIAGTVDFLPES--P 68 (425)
T ss_pred cCEEEEeeeEECCCC----CCHHHHHHHHHcC----------------CCceEcCCcccccCCCCceEEEEeecccc--c
Confidence 469999999999998 7889988876431 1222211000000 0000010 0
Q ss_pred HHHhHhhHHHHHHHHHHHHHHhCCCCCCCcC------------------EEEEeec----------------CCC-----
Q 010144 154 LAEAFSEMDEIIFDTLDKLFARTDISPSEID------------------VLVVNVS----------------LFS----- 194 (517)
Q Consensus 154 m~~~~~ea~~la~~Aa~~aL~~agi~p~dID------------------~LI~a~s----------------~~~----- 194 (517)
.. .......++..|++++|+++|+++.+.+ .++.++. +..
T Consensus 69 ~~-~~~~~~~~~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (425)
T PRK06501 69 FG-ASALSEALARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHE 147 (425)
T ss_pred cc-ccCHHHHHHHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhh
Confidence 00 0112456789999999999998654321 1112110 111
Q ss_pred --CCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecC---------------CCCC-
Q 010144 195 --PAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTES---------------MGPN- 256 (517)
Q Consensus 195 --~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~---------------~s~~- 256 (517)
..|+.+.+|+..+|++ .+++++.. +|++++.||..|.++|++|..+.+||+++|. .+..
T Consensus 148 ~~~~~~~a~~i~~~~gl~--G~~~~i~~-aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~ 224 (425)
T PRK06501 148 RFQFGSIADRLADRFGTR--GLPISLST-ACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQN 224 (425)
T ss_pred hhcccHHHHHHHHHhCCC--CCceeecC-ccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhccccCC
Confidence 3567899999999996 47899998 9999999999999999999999999999994 2210
Q ss_pred -C----CCC--CCccccccccccccceEEEEEeecccccccchhhccc-eeeeeeccCcccccceeeccccCCCCCcccc
Q 010144 257 -W----YCG--REKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNC-LVRTHFGSNDEAYECCMQVEDQQGHPGFRLT 328 (517)
Q Consensus 257 -~----~~~--~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~-i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls 328 (517)
+ ..+ .+++ ..++||||+|+||++......+ +.++.. +..+....|+.+ ...+ .
T Consensus 225 ~~~~~~~rpfd~~r~----G~v~GEGaaalVLe~~~~A~~r-g~~i~a~i~g~~~~~d~~~---~~~~-----------~ 285 (425)
T PRK06501 225 DPPEKASKPFSKDRD----GFVMAEGAGALVLESLESAVAR-GAKILGIVAGCGEKADSFH---RTRS-----------S 285 (425)
T ss_pred CCCCcccCCCCCCCC----CeeeeccEEEEEECcHHHHHHC-CCeEEEEEEEEEEccCCCC---CCCC-----------C
Confidence 0 001 2333 5789999999999986542111 111111 111111112100 0000 0
Q ss_pred hhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHHHHH
Q 010144 329 KQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGT 408 (517)
Q Consensus 329 ~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il~~i 408 (517)
|+ + . .+.+.+++++ +++|+.| +|||++..|..+....|..
T Consensus 286 ---~~--~-----------------~--------~~~~ai~~AL-------~~agi~p---~dId~i~~Hgtgt~~~d~~ 325 (425)
T PRK06501 286 ---PD--G-----------------S--------PAIGAIRAAL-------ADAGLTP---EQIDYINAHGTSTPENDKM 325 (425)
T ss_pred ---CC--H-----------------H--------HHHHHHHHHH-------HHcCCCH---HHcCEEEecCccCcchHHH
Confidence 00 0 0 1234445555 6889996 8999999998876665544
Q ss_pred -----HhhCCCCcccchhhhhcccCcccchhhHHHHHHHH---HHHcCCCCC------------------------CCEE
Q 010144 409 -----GKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGY---MEAKKRLKK------------------------GDRI 456 (517)
Q Consensus 409 -----~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~---~~~~g~i~~------------------------Gd~V 456 (517)
.+.+|-...++. -..+-..+||+.+|+-.+.+.. ++++|.+.| -+.+
T Consensus 326 E~~al~~~~~~~~~~~p-v~s~k~~~Gh~~~AsG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (425)
T PRK06501 326 EYLGLSAVFGERLASIP-VSSNKSMIGHTLTAAGAVEAVFSLLTIQTGRLPPTINYDNPDPAIPLDVVPNVARDARVTAV 404 (425)
T ss_pred HHHHHHHHhcccCCCcE-EECCCcccCCCchhhhHHHHHHHHHHHhcCcCCCcCCCCCCCCCCCcccCCCcccCCCCCEE
Confidence 334442222221 0123356799998887776643 344543321 2456
Q ss_pred EEEEechhHHhheeeeEE
Q 010144 457 LMISLGAGFKCNNCVWEV 474 (517)
Q Consensus 457 lliafG~G~t~~a~vlr~ 474 (517)
+.-+||.|-.-.+++++.
T Consensus 405 l~ns~gfgG~n~~~vl~~ 422 (425)
T PRK06501 405 LSNSFGFGGQNASLVLTA 422 (425)
T ss_pred EEeCccCCCeeEEEEEec
Confidence 677888888877777764
|
|
| >cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.3e-12 Score=134.33 Aligned_cols=93 Identities=16% Similarity=0.123 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHc
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~a 239 (517)
..+|+.+|++++|+++|++++|||.++++++ +....|..+.+++.++|++ .++.++++. +|++++.++..|..++++
T Consensus 16 ~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~~-~c~sg~~al~~Aa~~I~s 93 (375)
T cd00829 16 PLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLL-GKPATRVEA-AGASGSAAVRAAAAAIAS 93 (375)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCC-CcceeeEeC-ccHHHHHHHHHHHHHHHh
Confidence 4577899999999999999999999998754 4433577889999999997 789999996 999999999999999999
Q ss_pred CCCCEEEEEEecCCCC
Q 010144 240 YKNKLAIVVSTESMGP 255 (517)
Q Consensus 240 g~~~~aLVVs~E~~s~ 255 (517)
|..+.+||+++|..+.
T Consensus 94 G~~~~vlv~g~e~~s~ 109 (375)
T cd00829 94 GLADVVLVVGAEKMSD 109 (375)
T ss_pred CCCCEEEEEEEeeccc
Confidence 9999999999998764
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. |
| >TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II | Back alignment and domain information |
|---|
Probab=99.46 E-value=7.7e-12 Score=132.75 Aligned_cols=317 Identities=11% Similarity=0.051 Sum_probs=179.5
Q ss_pred CceEEEEEEEEeCCCCCceecHHHHHHHHHhcc-cCChHHHHHHHHHHHHhCCceeE--eccCCCcCCCCC-CccHHHhH
Q 010144 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNK-KLGLEEYRFLLKNMVSSGIGEET--YGPRNVVEGREE-SPSLAEAF 158 (517)
Q Consensus 83 ~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~-~~~~~~~~~~~ri~~~sGI~~r~--~~~~~~~~~~~~-~~~m~~~~ 158 (517)
++|.|+|+|+..|-. .+.+++.+.+..-. .+.+- .+ +...+...+. .+++ +....- .+.-.+..
T Consensus 1 ~~v~ItG~g~~~p~g----~~~~~~~~~l~~g~s~~~~~-----~~-~~~~~~~~~~~g~i~~--f~~~~~~~~~~~~~~ 68 (407)
T TIGR03150 1 RRVVVTGLGAVTPLG----NGVEEFWENLLAGKSGIGPI-----TR-FDASDLPVKIAGEVKD--FDPEDYIDKKEARRM 68 (407)
T ss_pred CcEEEEcceEECCCc----CCHHHHHHHHHcCCCeeEEC-----Cc-ccccCCCCcEEEEeCC--cChhhcCCHHHHhhc
Confidence 478999999999998 78899888764310 01100 00 0000110000 0111 000000 00111111
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCcCE----EEEeecCC------------------CC--------CC-cHHHHHHHHc
Q 010144 159 SEMDEIIFDTLDKLFARTDISPSEIDV----LVVNVSLF------------------SP--------AP-SLTSRIINRY 207 (517)
Q Consensus 159 ~ea~~la~~Aa~~aL~~agi~p~dID~----LI~a~s~~------------------~~--------~P-s~a~~I~~~L 207 (517)
....+|+..|++++|+++|++++++|. ++++++.. .. .+ ..+.+|...+
T Consensus 69 ~~~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 148 (407)
T TIGR03150 69 DRFIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRY 148 (407)
T ss_pred CHHHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHh
Confidence 234678999999999999999998875 55543210 00 11 2456789999
Q ss_pred CCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCC-----------CC----------CCCCcccc
Q 010144 208 NLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN-----------WY----------CGREKSMM 266 (517)
Q Consensus 208 Gl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~-----------~~----------~~~dr~~l 266 (517)
|++ .+++.+.. +|++++.||..|..+|++|..+.+||++.|..... +. .+-|...
T Consensus 149 gl~--g~~~~v~~-acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~- 224 (407)
T TIGR03150 149 GAK--GPNHAVVT-ACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKDR- 224 (407)
T ss_pred CCC--Cccccccc-HHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcCCC-
Confidence 995 57888997 99999999999999999999999999999963320 00 0011110
Q ss_pred ccccccccceEEEEEeecccccccchhhc-cceeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhh
Q 010144 267 LSNILFRSGGCSMLLTNNRALKHKAILKL-NCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQV 345 (517)
Q Consensus 267 v~~~lfGDGAAAvLLs~~~~~~~~~~~~l-~~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~ 345 (517)
..++.||||+|+||++......+ +-++ ..+.......|+.. +..+ . +. +
T Consensus 225 -~g~~~gEGAaalvL~~~~~A~~~-g~~i~a~i~g~~~~~d~~~---~~~~-----------~---~~--~--------- 274 (407)
T TIGR03150 225 -DGFVMGEGAGVLVLEELEHAKAR-GAKIYAEIVGYGMSGDAYH---ITAP-----------A---PE--G--------- 274 (407)
T ss_pred -CcEEEeceEEEEEEeeHHHHHHC-CCeEEEEEEEEEECCCCCC---CCCC-----------C---CC--c---------
Confidence 24688999999999986532111 1111 01111111122110 0000 0 00 0
Q ss_pred cccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChH-----HHHHHHhhCCCCcccch
Q 010144 346 LVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRA-----VIDGTGKGLELDEYDLE 420 (517)
Q Consensus 346 lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~-----il~~i~~~Lgl~~e~~~ 420 (517)
. ...+.+++++ +++|++| +|||++..|-.+.. -...+.+.++-...++.
T Consensus 275 --------~--------~~~~ai~~Al-------~~Agi~~---~dId~ve~h~tgt~~~D~~E~~a~~~~~~~~~~~~~ 328 (407)
T TIGR03150 275 --------E--------GAARAMRAAL-------KDAGINP---EDVDYINAHGTSTPLGDKAETKAIKRVFGDHAYKLA 328 (407)
T ss_pred --------H--------HHHHHHHHHH-------HHcCCCH---hHCCEEeCcCCCCCCCCHHHHHHHHHHhccCCCCCc
Confidence 0 0123344555 6889986 89999999987663 33446666665433331
Q ss_pred hhhhcccCcccchhhHHHHHHHH---HHHcCCCC------------------------CCCEEEEEEechhHHhheeee
Q 010144 421 PARMALHRFGNTSAGGLWYVLGY---MEAKKRLK------------------------KGDRILMISLGAGFKCNNCVW 472 (517)
Q Consensus 421 ~S~~~l~~~GNtsSASi~~~L~~---~~~~g~i~------------------------~Gd~VlliafG~G~t~~a~vl 472 (517)
- -..-..+||+.+|+-...+.. .++.+.+. +-.+++.-+||.|-+-.++++
T Consensus 329 v-~s~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~s~gfgG~n~~~vl 406 (407)
T TIGR03150 329 V-SSTKSMTGHLLGAAGAIEAIFTVLAIRDGVVPPTINLDNPDPECDLDYVPNEARERKIDYALSNSFGFGGHNASLVF 406 (407)
T ss_pred e-eCCcchhchhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccCCCCccCCcCEEEEecccCCCceEEEEe
Confidence 0 122345699888776665543 34443211 124677888998877666665
|
FabB sequences should fall well below the noise cutoff of this model. |
| >cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.3e-11 Score=131.27 Aligned_cols=122 Identities=18% Similarity=0.202 Sum_probs=92.7
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCcCE----EEEeec-CC-------------------CCCCcHHHHHHHHcCCCCCeeE
Q 010144 160 EMDEIIFDTLDKLFARTDISPSEIDV----LVVNVS-LF-------------------SPAPSLTSRIINRYNLRNDIKA 215 (517)
Q Consensus 160 ea~~la~~Aa~~aL~~agi~p~dID~----LI~a~s-~~-------------------~~~Ps~a~~I~~~LGl~~~~~~ 215 (517)
....|+..|+++||+++|+++++++. ++++++ .+ ...+..+..|+..+|++ .++
T Consensus 86 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~--g~~ 163 (421)
T cd00833 86 PQQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLR--GPS 163 (421)
T ss_pred HHHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCCC--CCc
Confidence 45789999999999999999887763 555432 11 11245678899999996 388
Q ss_pred EEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCC----------------CCCCCCccccccccccccceEEE
Q 010144 216 FNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN----------------WYCGREKSMMLSNILFRSGGCSM 279 (517)
Q Consensus 216 ~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~----------------~~~~~dr~~lv~~~lfGDGAAAv 279 (517)
+.+.+ +|++++.||..|.++|++|..+.+||+++|..... ...+-|+. -...++||||+|+
T Consensus 164 ~~v~~-acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~--~~g~~~geGAaal 240 (421)
T cd00833 164 LTVDT-ACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDAD--ADGYVRGEGVGVV 240 (421)
T ss_pred eeecc-HhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCCCCCCCCCCCCC--CCCeeeeceEEEE
Confidence 99997 99999999999999999999999999999985420 00111111 1257899999999
Q ss_pred EEeeccc
Q 010144 280 LLTNNRA 286 (517)
Q Consensus 280 LLs~~~~ 286 (517)
||++.+.
T Consensus 241 vL~~~~~ 247 (421)
T cd00833 241 VLKRLSD 247 (421)
T ss_pred EEeeHHH
Confidence 9998654
|
PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. |
| >PRK07108 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.8e-12 Score=135.07 Aligned_cols=94 Identities=13% Similarity=0.193 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCc-HHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHH
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPS-LTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps-~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ 238 (517)
+.+|+.+|++++|+++|++|+|||.||+++ +++...|+ .+..+..++|++.++++++++. +|++++.|+.+|..+|+
T Consensus 27 ~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~p~~~V~~-aCaSg~~Al~~A~~~I~ 105 (392)
T PRK07108 27 GATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTVPGMTVNR-FCSSGLQTIALAAQRVI 105 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCCceeeecc-hhhHHHHHHHHHHHHHH
Confidence 356789999999999999999999999975 45555554 8889999999987799999997 99999999999999999
Q ss_pred cCCCCEEEEEEecCCCC
Q 010144 239 TYKNKLAIVVSTESMGP 255 (517)
Q Consensus 239 ag~~~~aLVVs~E~~s~ 255 (517)
+|..+.+|+++.|.+|.
T Consensus 106 sG~~d~vlagGvE~ms~ 122 (392)
T PRK07108 106 AGEGDVFVAGGVESISC 122 (392)
T ss_pred CCCCCEEEEEEEeccCC
Confidence 99999999999999875
|
|
| >PRK08313 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=8.2e-12 Score=132.37 Aligned_cols=91 Identities=11% Similarity=0.070 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCC--CCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHc
Q 010144 162 DEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSP--APSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (517)
Q Consensus 162 ~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~--~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~a 239 (517)
.+|+.+|+++||+++|++++|||.|+++++++.. .+..+..|++.||++ ..+++++++ +|+++..+++.|..+|++
T Consensus 25 ~eL~~eAa~~Al~dAgl~~~dID~iv~~~~~~~~~~~~~~~~~va~~LGl~-~~~~~~v~~-~casg~~al~~A~~~I~s 102 (386)
T PRK08313 25 AGLVREAIDRALADAGLTWDDIDAVVVGKAPDFFEGVMMPELFLADALGAT-GKPLIRVHT-AGSVGGSTAVVAASLVQS 102 (386)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEeccccccccccCchHHHHHhcCCC-CCceEEEec-cCHHHHHHHHHHHHHHHC
Confidence 4678999999999999999999999987655432 122337899999997 678999997 999999999999999999
Q ss_pred CCCCEEEEEEecCCC
Q 010144 240 YKNKLAIVVSTESMG 254 (517)
Q Consensus 240 g~~~~aLVVs~E~~s 254 (517)
|..++||||++|..+
T Consensus 103 G~~~~vLVvg~e~~s 117 (386)
T PRK08313 103 GVYRRVLAVAWEKQS 117 (386)
T ss_pred CCCCEEEEEEEEEcc
Confidence 999999999999753
|
|
| >PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.4e-13 Score=113.62 Aligned_cols=80 Identities=16% Similarity=0.377 Sum_probs=62.5
Q ss_pred EEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhc
Q 010144 216 FNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKL 295 (517)
Q Consensus 216 ~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l 295 (517)
|||++ +|+|++.||++|.++++++..++||||++|+.+. +.++.++.. ..+|||||+|+||++.++. ++
T Consensus 1 fDi~~-~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~-~~~~~~~~~---~~~~gDgAaA~vl~~~~~~----~~-- 69 (80)
T PF08545_consen 1 FDINQ-ACAGFLYALDVAAALIASGRAKNALVVGGDRLSR-IVDRTDRQT---AFIFGDGAAAVVLSRDEEG----GF-- 69 (80)
T ss_dssp EEEE--GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGG-GSHTTHHHH---HTTB-EEEEEEEEEEESSS----SC--
T ss_pred Ccccc-cchHHHHHHHHHHHHHhhccCCEEEEEeeccccc-cccccccCc---ceeecchheEEEEEecCCC----CC--
Confidence 79997 9999999999999999999999999999999988 555555543 5799999999999997432 22
Q ss_pred cceeeeeeccCc
Q 010144 296 NCLVRTHFGSND 307 (517)
Q Consensus 296 ~~i~~t~~~td~ 307 (517)
.++.++..+||
T Consensus 70 -~il~~~~~tdG 80 (80)
T PF08545_consen 70 -GILDSHLRTDG 80 (80)
T ss_dssp -EEEEEEEEE-G
T ss_pred -eEEEEEEEcCC
Confidence 35667777764
|
The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. |
| >PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.42 E-value=4e-11 Score=127.77 Aligned_cols=319 Identities=11% Similarity=0.046 Sum_probs=183.4
Q ss_pred CceEEEEEEEEeCCCCCceecHHHHHHHHHhcc-cCChHHHHHHHHHHHHhCCceeE--eccCCCcCCCCC-CccHHHhH
Q 010144 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNK-KLGLEEYRFLLKNMVSSGIGEET--YGPRNVVEGREE-SPSLAEAF 158 (517)
Q Consensus 83 ~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~-~~~~~~~~~~~ri~~~sGI~~r~--~~~~~~~~~~~~-~~~m~~~~ 158 (517)
++|.|+|+|+..|-. .+.+++.+.+..-. .+.+- .+ +...+...+. .+++. ....- .+.-.+..
T Consensus 2 ~~v~ItG~g~~~p~g----~~~~~~w~~l~~g~~~~~~~-----~~-~~~~~~~~~~~g~i~~f--~~~~~~~~~~~~~~ 69 (411)
T PRK07314 2 RRVVVTGLGAVSPLG----NDVESTWKNLLAGKSGIGPI-----TH-FDTSDLAVKIAGEVKDF--NPDDYMSRKEARRM 69 (411)
T ss_pred CcEEEEcceEECCCc----CCHHHHHHHHHhCCCcEEEC-----Cc-ccccCCCccEEEEeCCc--ChhhcCCHHHhhcC
Confidence 579999999999998 78899988764311 00000 00 0001111110 01110 00000 00001111
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCcC----EEEEeecCC----------------------C----CCC-cHHHHHHHHc
Q 010144 159 SEMDEIIFDTLDKLFARTDISPSEID----VLVVNVSLF----------------------S----PAP-SLTSRIINRY 207 (517)
Q Consensus 159 ~ea~~la~~Aa~~aL~~agi~p~dID----~LI~a~s~~----------------------~----~~P-s~a~~I~~~L 207 (517)
.....|+..|+++||+++|++++++| .++++++.. . ..+ ..+.+|...+
T Consensus 70 ~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 149 (411)
T PRK07314 70 DRFIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRY 149 (411)
T ss_pred CHHHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHh
Confidence 23467899999999999999998887 455554211 0 111 2467899999
Q ss_pred CCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCCC---------------------CCCCCcccc
Q 010144 208 NLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNW---------------------YCGREKSMM 266 (517)
Q Consensus 208 Gl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~~---------------------~~~~dr~~l 266 (517)
|+++ +++-+.. +|++++.||..|.++|++|..+.+||.++|.....+ ..+-|++.
T Consensus 150 gl~G--p~~tv~~-acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~- 225 (411)
T PRK07314 150 GAKG--PNHSIVT-ACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDR- 225 (411)
T ss_pred CCCC--ccccchh-hhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCCC-
Confidence 9964 7788887 999999999999999999999999999998743210 00011110
Q ss_pred ccccccccceEEEEEeecccccccchhhc-cceeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhh
Q 010144 267 LSNILFRSGGCSMLLTNNRALKHKAILKL-NCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQV 345 (517)
Q Consensus 267 v~~~lfGDGAAAvLLs~~~~~~~~~~~~l-~~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~ 345 (517)
..+++||||+|+||++......+ +-++ ..+.......|+.. +..+ + +. +
T Consensus 226 -dG~~~geGAaavvL~~~~~A~~~-g~~~~a~I~g~~~~~d~~~---~~~~-----------~---~~--~--------- 275 (411)
T PRK07314 226 -DGFVMGEGAGILVLEELEHAKAR-GAKIYAEVVGYGMTGDAYH---MTAP-----------A---PD--G--------- 275 (411)
T ss_pred -CCEeEEceEEEEEEeeHHHHHHC-CCeEEEEEEEEEEcCCCCC---CCCC-----------C---CC--c---------
Confidence 25789999999999986432110 1010 11222212222110 0000 0 00 0
Q ss_pred cccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHHH-----HHHhhCCCCcccch
Q 010144 346 LVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVID-----GTGKGLELDEYDLE 420 (517)
Q Consensus 346 lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il~-----~i~~~Lgl~~e~~~ 420 (517)
.. ..+.+.+++ +++|+.| +|||++..|..+...-| .+.+.++....++.
T Consensus 276 --------~~--------~~~a~~~Al-------~~agi~~---~dId~v~~hgtgt~~~d~~E~~al~~~~~~~~~~~~ 329 (411)
T PRK07314 276 --------EG--------AARAMKLAL-------KDAGINP---EDIDYINAHGTSTPAGDKAETQAIKRVFGEHAYKVA 329 (411)
T ss_pred --------HH--------HHHHHHHHH-------HHcCCCH---HHCCEEEccccCCccccHHHHHHHHHHhcccCCCCe
Confidence 00 112334455 6889996 99999999987764443 34555664434441
Q ss_pred hhhhcccCcccchhhHHHHHHHH---HHHcCCCC------------------------CCCEEEEEEechhHHhheeeeE
Q 010144 421 PARMALHRFGNTSAGGLWYVLGY---MEAKKRLK------------------------KGDRILMISLGAGFKCNNCVWE 473 (517)
Q Consensus 421 ~S~~~l~~~GNtsSASi~~~L~~---~~~~g~i~------------------------~Gd~VlliafG~G~t~~a~vlr 473 (517)
. -..-..+||+.+|+-...+.. +++.|.+. +-++++.-+||.|-.-.+++++
T Consensus 330 v-~s~k~~~Gh~~~AsG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~s~gfGG~n~~~vl~ 408 (411)
T PRK07314 330 V-SSTKSMTGHLLGAAGAVEAIFSVLAIRDQVIPPTINLDNPDEECDLDYVPNEARERKIDYALSNSFGFGGTNASLVFK 408 (411)
T ss_pred e-ECccchhchhHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCccccCCcccCCCCCEEEEecccCCCceEEEEEe
Confidence 1 122356799888776655543 34444321 2256788889999888888876
Q ss_pred E
Q 010144 474 V 474 (517)
Q Consensus 474 ~ 474 (517)
.
T Consensus 409 ~ 409 (411)
T PRK07314 409 R 409 (411)
T ss_pred c
Confidence 4
|
|
| >PRK06205 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.3e-11 Score=131.47 Aligned_cols=94 Identities=21% Similarity=0.266 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHc
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~a 239 (517)
..+|+.+|++++|+++|++|+|||.||++++ +....|..+..++..+|++.++++++++. +|++++.|+.+|.+++++
T Consensus 26 ~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p~~~V~~-~CaSg~~Al~~A~~~I~s 104 (404)
T PRK06205 26 AEELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVPGMQLDR-RCGSGLQAVITAAMQVQT 104 (404)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCceeehhh-hhhHHHHHHHHHHHHHHc
Confidence 4577899999999999999999999999864 55667888889999999986789999997 999999999999999999
Q ss_pred CCCCEEEEEEecCCCC
Q 010144 240 YKNKLAIVVSTESMGP 255 (517)
Q Consensus 240 g~~~~aLVVs~E~~s~ 255 (517)
|..+.+||++.|.+|.
T Consensus 105 G~~d~vLv~G~E~ms~ 120 (404)
T PRK06205 105 GAADVVIAGGAESMSN 120 (404)
T ss_pred CCCCEEEEeeehhhcc
Confidence 9999999999998763
|
|
| >PRK08242 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.2e-11 Score=129.50 Aligned_cols=94 Identities=17% Similarity=0.232 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCC-CcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHH
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPA-PSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s-~~~~~-Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ 238 (517)
+.+|+..|++++|+++|++|++||.||+++. +.... +..+.......|++.++++++|+. +|+|++.||.+|.++|+
T Consensus 28 ~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~~~pa~~Vn~-aCaSg~~Ai~~A~~~I~ 106 (402)
T PRK08242 28 PVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPETVPGVQINR-FCASGLEAVNLAAAKVR 106 (402)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCCCCCeEEEcc-hhhhHHHHHHHHHHHHH
Confidence 4577899999999999999999999999764 43333 345566668889976799999997 99999999999999999
Q ss_pred cCCCCEEEEEEecCCCC
Q 010144 239 TYKNKLAIVVSTESMGP 255 (517)
Q Consensus 239 ag~~~~aLVVs~E~~s~ 255 (517)
+|..+.+|++++|.+|.
T Consensus 107 sG~~d~vLv~G~E~mS~ 123 (402)
T PRK08242 107 SGWDDLVIAGGVESMSR 123 (402)
T ss_pred cCCCCEEEEEEEEccCC
Confidence 99999999999999875
|
|
| >PRK12578 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.9e-11 Score=128.10 Aligned_cols=91 Identities=13% Similarity=0.208 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcC
Q 010144 162 DEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTY 240 (517)
Q Consensus 162 ~~la~~Aa~~aL~~agi~p~dID~LI~a~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag 240 (517)
.+|+.+|++++|+++|++++|||.||++++ +....+..+..++..+|++ +.+++++++ +|++++.||.+|..+|++|
T Consensus 22 ~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~-~~~~~~v~~-~casg~~al~~A~~~I~sG 99 (385)
T PRK12578 22 QELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLT-GKVPLRVEA-MCATGLAASLTAYTAVASG 99 (385)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCC-CCCeeEEec-cCHHHHHHHHHHHHHHHCC
Confidence 467899999999999999999999998764 2222233468899999998 467799996 9999999999999999999
Q ss_pred CCCEEEEEEecCCC
Q 010144 241 KNKLAIVVSTESMG 254 (517)
Q Consensus 241 ~~~~aLVVs~E~~s 254 (517)
..+++|||++|.++
T Consensus 100 ~~~~vLvvg~e~~s 113 (385)
T PRK12578 100 LVDMAIAVGVDKMT 113 (385)
T ss_pred CCCEEEEEEEeecc
Confidence 99999999999754
|
|
| >PRK05790 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.9e-11 Score=129.87 Aligned_cols=93 Identities=16% Similarity=0.252 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHc
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~a 239 (517)
..+|+.+|+++||+++|++|+|||.+|++++ +....+..+..++..+|++.+++++++++ +|++++.||.+|..++++
T Consensus 26 ~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~~~~~v~~-~Casg~~al~~A~~~I~s 104 (393)
T PRK05790 26 AVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEVPALTINK-VCGSGLKAVALAAQAIRA 104 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCCceeeecc-cchHHHHHHHHHHHHHHc
Confidence 3577899999999999999999999998753 32223445556777889975689999997 999999999999999999
Q ss_pred CCCCEEEEEEecCCC
Q 010144 240 YKNKLAIVVSTESMG 254 (517)
Q Consensus 240 g~~~~aLVVs~E~~s 254 (517)
|..+++||+++|.+|
T Consensus 105 G~~d~vLv~G~e~~s 119 (393)
T PRK05790 105 GDADIVVAGGQESMS 119 (393)
T ss_pred CCCCEEEEEeeeccc
Confidence 999999999998753
|
|
| >PRK08235 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.7e-11 Score=130.27 Aligned_cols=94 Identities=13% Similarity=0.203 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHc
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~a 239 (517)
..+|+.+|++++|+++|++|+|||.+|+++. +....+..+..++..+|++.++++++++. +|++|+.|+.+|..+|++
T Consensus 26 ~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~V~~-~CaSg~~Al~~A~~~I~s 104 (393)
T PRK08235 26 ATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQTETVNK-VCASGLRAVTLADQIIRA 104 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCcceeehhh-hhhHHHHHHHHHHHHHHC
Confidence 3577899999999999999999999999864 32123445567899999976799999997 999999999999999999
Q ss_pred CCCCEEEEEEecCCCC
Q 010144 240 YKNKLAIVVSTESMGP 255 (517)
Q Consensus 240 g~~~~aLVVs~E~~s~ 255 (517)
|..+.+||+++|.+|.
T Consensus 105 G~~d~vLvvG~E~ms~ 120 (393)
T PRK08235 105 GDASVIVAGGMESMSN 120 (393)
T ss_pred CCCCEEEEEeeecccc
Confidence 9999999999998875
|
|
| >PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated | Back alignment and domain information |
|---|
Probab=99.39 E-value=2.5e-11 Score=129.65 Aligned_cols=251 Identities=13% Similarity=0.091 Sum_probs=152.4
Q ss_pred HHHHHHHHHHHHHHhCCCC---CCCcCEEEEeec----------------CCCCCC---------cHHHHHHHHcCCCCC
Q 010144 161 MDEIIFDTLDKLFARTDIS---PSEIDVLVVNVS----------------LFSPAP---------SLTSRIINRYNLRND 212 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~---p~dID~LI~a~s----------------~~~~~P---------s~a~~I~~~LGl~~~ 212 (517)
...|+..|++++|+++|++ +++|++++-++. +.+..| ..+..|+..||+++
T Consensus 80 ~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~G- 158 (410)
T PRK07103 80 SAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIRG- 158 (410)
T ss_pred HHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCCC-
Confidence 4679999999999999986 456666664331 111122 25677889999964
Q ss_pred eeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCCC-----------------------CCCCCccccccc
Q 010144 213 IKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNW-----------------------YCGREKSMMLSN 269 (517)
Q Consensus 213 ~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~~-----------------------~~~~dr~~lv~~ 269 (517)
+++.+.+ +|++++.||..|.++|++|..+.+||+++|.....+ ..+-|+.. ..
T Consensus 159 -~~~tv~~-acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~~~--dG 234 (410)
T PRK07103 159 -EGFTVGG-ASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDR--DG 234 (410)
T ss_pred -Ccccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCCCC--CC
Confidence 7788998 999999999999999999999999999886421100 00111111 25
Q ss_pred cccccceEEEEEeecccccccchhhccceeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhcccc
Q 010144 270 ILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPK 349 (517)
Q Consensus 270 ~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl 349 (517)
.++||||+|+||++......+..--...+......+|+.. .. . |...
T Consensus 235 ~v~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~d~~~---~~-------------~---p~~~-------------- 281 (410)
T PRK07103 235 FIYGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANR---GP-------------D---PSLE-------------- 281 (410)
T ss_pred eeEeeeEEEEEEccHHHHHHCCCceEEEEEEEEEecCCCC---CC-------------C---CCHH--------------
Confidence 7899999999999764421110000111222323333211 00 0 0000
Q ss_pred cCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHHHHHHh-h-CCCCcccchhhhhccc
Q 010144 350 ILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGK-G-LELDEYDLEPARMALH 427 (517)
Q Consensus 350 ~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il~~i~~-~-Lgl~~e~~~~S~~~l~ 427 (517)
...+.+++++ +.+|+.| +|||++..|..+...-|.++. . .+.....+. --.+-.
T Consensus 282 -------------~~~~a~~~Al-------~~Agi~~---~dId~v~~hgtgt~~~D~~E~~al~~~~~~~~~-v~s~k~ 337 (410)
T PRK07103 282 -------------GEMRVIRAAL-------RRAGLGP---EDIDYVNPHGTGSPLGDETELAALFASGLAHAW-INATKS 337 (410)
T ss_pred -------------HHHHHHHHHH-------HHcCCCH---HHCCEEEccCCCCCCCCHHHHHHHhcCCCCCCe-EECCCc
Confidence 0113344555 6889986 899999999877664433221 1 222112221 023345
Q ss_pred CcccchhhHHHHHHHHH---HHcCCCC-----------------------CCCEEEEEEechhHHhheeeeE
Q 010144 428 RFGNTSAGGLWYVLGYM---EAKKRLK-----------------------KGDRILMISLGAGFKCNNCVWE 473 (517)
Q Consensus 428 ~~GNtsSASi~~~L~~~---~~~g~i~-----------------------~Gd~VlliafG~G~t~~a~vlr 473 (517)
.+||+.+|+-.+.|... ++.|.+. +-.+++.-+||.|-.-.+++++
T Consensus 338 ~~Gh~~~AsG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~s~gfGG~n~~~vl~ 409 (410)
T PRK07103 338 LTGHGLSAAGIVELIATLLQMRAGFLHPSRNLDEPIDERFRWVGSTAESARIRYALSLSFGFGGINTALVLE 409 (410)
T ss_pred ccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCcCccCCCCcCCCCCEEEEecccCCCceEEEEEe
Confidence 67999999888777543 3333321 1256777889988887887775
|
|
| >PRK06954 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=2.6e-11 Score=128.93 Aligned_cols=94 Identities=12% Similarity=0.145 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHc
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~a 239 (517)
..+|+.+|++++|+++|++|+|||.+|++++ +.......+......+|++.++++++++. +|++|+.|+..|..++++
T Consensus 31 ~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~~~~~~~~~l~ag~~~~~p~~~V~~-aCaSG~~Av~~A~~~I~s 109 (397)
T PRK06954 31 APQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVGCTTVNK-MCGSGMRAAMFAHDMLVA 109 (397)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccchHHHHHHHHcCCCCCCccEeeccc-cchHHHHHHHHHHHHHHC
Confidence 4677899999999999999999999999854 33333344444455667776699999997 999999999999999999
Q ss_pred CCCCEEEEEEecCCCC
Q 010144 240 YKNKLAIVVSTESMGP 255 (517)
Q Consensus 240 g~~~~aLVVs~E~~s~ 255 (517)
|..+.+||+++|.+|.
T Consensus 110 G~~d~vLv~G~E~ms~ 125 (397)
T PRK06954 110 GSVDVIVAGGMESMTN 125 (397)
T ss_pred CCCCEEEEEeeeccCC
Confidence 9999999999999873
|
|
| >PRK06059 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=3.8e-11 Score=127.83 Aligned_cols=91 Identities=10% Similarity=0.046 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeec-C-CCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHc
Q 010144 162 DEIIFDTLDKLFARTDISPSEIDVLVVNVS-L-FSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (517)
Q Consensus 162 ~~la~~Aa~~aL~~agi~p~dID~LI~a~s-~-~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~a 239 (517)
.+|+.+|+++||+++|++++|||.||++++ + .+..|..+..|+.++|++ +++.+++++ +|++++.||.+|.++|++
T Consensus 24 ~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~-~~~~~~v~~-~Casg~~al~~A~~~I~s 101 (399)
T PRK06059 24 VEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWN-GAPVSSSYA-ACASGSQALQSARAQILA 101 (399)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCC-CCceecccc-hhHHHHHHHHHHHHHHHC
Confidence 577899999999999999999999998653 2 233456678999999997 588999997 999999999999999999
Q ss_pred CCCCEEEEEEecCCC
Q 010144 240 YKNKLAIVVSTESMG 254 (517)
Q Consensus 240 g~~~~aLVVs~E~~s 254 (517)
|..+++|||++|..+
T Consensus 102 G~~~~vLvvg~e~~s 116 (399)
T PRK06059 102 GLCDVALVVGADTTP 116 (399)
T ss_pred CCCCEEEEEEEcccC
Confidence 999999999999765
|
|
| >PRK06445 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.3e-11 Score=128.12 Aligned_cols=91 Identities=20% Similarity=0.288 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCC---CCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHH
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSP---APSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQL 236 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s-~~~~---~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~l 236 (517)
..+|+.+|++++|+++|++|+|||.+|++++ +++. .++....+...++ .++++++++. +|++++.|+..|..+
T Consensus 32 ~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~~~--~~~p~~~V~~-~CaSg~~ai~~A~~~ 108 (394)
T PRK06445 32 PEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLARLP--YNIPAMAVDR-QCASSLTTVSIGAME 108 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcCCC--CCCcchhhhh-hhHHHHHHHHHHHHH
Confidence 3577899999999999999999999998754 3332 2344455666665 3689999996 999999999999999
Q ss_pred HHcCCCCEEEEEEecCCC
Q 010144 237 FRTYKNKLAIVVSTESMG 254 (517)
Q Consensus 237 L~ag~~~~aLVVs~E~~s 254 (517)
+++|..+++||++.|.+|
T Consensus 109 I~sG~~d~vLv~G~e~ms 126 (394)
T PRK06445 109 IATGMADIVIAGGVEHMT 126 (394)
T ss_pred HHcCCCCEEEEeeecccc
Confidence 999999999999999765
|
|
| >PRK07661 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=8.7e-11 Score=124.74 Aligned_cols=94 Identities=15% Similarity=0.138 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCC-CCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHH
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSP-APSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s-~~~~-~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ 238 (517)
..+|+.+|++++|+++|+.++|||.++++++ ++.. .+.++.+++..+|++..++++++++ +|++|+.|+..|..+|+
T Consensus 27 ~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~p~~~V~~-aCaSG~~Al~~A~~~I~ 105 (391)
T PRK07661 27 PDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTVPAITINR-YCSSGLQSIAYGAERIM 105 (391)
T ss_pred HHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCcceeehhh-hhhHHHHHHHHHHHHHH
Confidence 3577899999999999988899999999754 3333 3677778999999975699999997 99999999999999999
Q ss_pred cCCCCEEEEEEecCCCC
Q 010144 239 TYKNKLAIVVSTESMGP 255 (517)
Q Consensus 239 ag~~~~aLVVs~E~~s~ 255 (517)
+|..+.+||++.|.+|.
T Consensus 106 sG~~d~vLv~G~E~ms~ 122 (391)
T PRK07661 106 LGHSEAVIAGGAESMSL 122 (391)
T ss_pred cCCCCEEEEEEEeeccc
Confidence 99999999999998763
|
|
| >PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.2e-10 Score=124.78 Aligned_cols=320 Identities=10% Similarity=0.048 Sum_probs=181.4
Q ss_pred CceEEEEEEEEeCCCCCceecHHHHHHHHHhcc-cCChHHHHHHHHHHHHhCCcee--EeccCCCc----CCCCC---Cc
Q 010144 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNK-KLGLEEYRFLLKNMVSSGIGEE--TYGPRNVV----EGREE---SP 152 (517)
Q Consensus 83 ~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~-~~~~~~~~~~~ri~~~sGI~~r--~~~~~~~~----~~~~~---~~ 152 (517)
++|.|+|+|+..|.. .+.+++.+.+..-. .+.+-. + ....+...+ ...++... ..++. .+
T Consensus 4 ~~V~ItG~g~~~p~g----~~~~~~w~~l~~G~s~i~~~~-~-----~~~~~~~~~~~g~i~~~~~~~~~~fd~~~~i~~ 73 (424)
T PRK06333 4 KRIVVTGMGAVSPLG----CGVETFWQRLLAGQSGIRTLT-D-----FPVGDLATKIGGQVPDLAEDAEAGFDPDRYLDP 73 (424)
T ss_pred CCEEEEcceEECCCC----CCHHHHHHHHHcCCCeEEeCC-c-----ccccCCCCceEEEeccccccccccCChhHcCCH
Confidence 679999999999998 78899988764311 000000 0 000011110 01111000 00000 00
Q ss_pred cHHHhHhhHHHHHHHHHHHHHHhCCCCCCCc-C----EEEEeecCC----------------------CCCC-----cHH
Q 010144 153 SLAEAFSEMDEIIFDTLDKLFARTDISPSEI-D----VLVVNVSLF----------------------SPAP-----SLT 200 (517)
Q Consensus 153 ~m~~~~~ea~~la~~Aa~~aL~~agi~p~dI-D----~LI~a~s~~----------------------~~~P-----s~a 200 (517)
...........++..|++++|+++|++++++ + .++++++.. +..| ..+
T Consensus 74 ~~~~~~d~~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 153 (424)
T PRK06333 74 KDQRKMDRFILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAA 153 (424)
T ss_pred HHHhhcCHHHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHH
Confidence 1111123346789999999999999987766 2 344443210 0011 236
Q ss_pred HHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCCC----------C------------
Q 010144 201 SRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNW----------Y------------ 258 (517)
Q Consensus 201 ~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~~----------~------------ 258 (517)
.+|...+|++ -+++.+.. +|++++.||..|.++|++|..+.+||+++|.....+ +
T Consensus 154 ~~is~~~gl~--Gp~~~v~~-aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~ 230 (424)
T PRK06333 154 GHVSIRYGFK--GPLGAPVT-ACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQAS 230 (424)
T ss_pred HHHHHHhCCC--CCCccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCC
Confidence 7899999996 47788887 999999999999999999999999999999732200 0
Q ss_pred CCCCccccccccccccceEEEEEeecccccccchhhcc-ceeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHH
Q 010144 259 CGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLN-CLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAAL 337 (517)
Q Consensus 259 ~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~-~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~ 337 (517)
.+.|+.. ...+.||||+++||++......+ +.++. .+......+|+.. +..+ .+. +
T Consensus 231 ~Pfd~~~--~G~~~gEGaa~lvLe~~~~A~~r-g~~i~a~i~G~~~~~d~~~---~~~~--------------~~~--~- 287 (424)
T PRK06333 231 RPFDRDR--DGFVMGEGAGILVIETLEHALAR-GAPPLAELVGYGTSADAYH---MTAG--------------PED--G- 287 (424)
T ss_pred CCCCCCC--CCeEEecceEEEEEeeHHHHHHC-CCeEEEEEEEEEEcCCCCC---CCCC--------------CCC--c-
Confidence 0111111 25678999999999975432111 11111 1222222223211 1000 000 0
Q ss_pred HHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHH-----HHHHHhhC
Q 010144 338 AFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAV-----IDGTGKGL 412 (517)
Q Consensus 338 ~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~i-----l~~i~~~L 412 (517)
. ...+.+++++ +++|+.| +|||++..|..+... +..+.+.+
T Consensus 288 ----------------~--------~~~~a~~~Al-------~~Agi~p---~dId~i~~hgtgt~~~D~~E~~al~~~f 333 (424)
T PRK06333 288 ----------------E--------GARRAMLIAL-------RQAGIPP---EEVQHLNAHATSTPVGDLGEVAAIKKVF 333 (424)
T ss_pred ----------------H--------HHHHHHHHHH-------HHcCCCH---HHCCEEeccCCCCccchHHHHHHHHHHh
Confidence 0 1223344555 6889986 899999999776543 34456666
Q ss_pred CCCcccchhhhhcccCcccchhhHHHHHHHH---HHHcCCC-------------------------CCCCEEEEEEechh
Q 010144 413 ELDEYDLEPARMALHRFGNTSAGGLWYVLGY---MEAKKRL-------------------------KKGDRILMISLGAG 464 (517)
Q Consensus 413 gl~~e~~~~S~~~l~~~GNtsSASi~~~L~~---~~~~g~i-------------------------~~Gd~VlliafG~G 464 (517)
| ....+.. -.+...+||+.+|+-.+.+.. +++.|.+ .+-++++.-+||.|
T Consensus 334 g-~~~~~~v-~s~K~~~GH~~gAaG~~~~~~~~l~l~~g~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~s~gfG 411 (424)
T PRK06333 334 G-HVSGLAV-SSTKSATGHLLGAAGGVEAIFTILALRDQIAPPTLNLENPDPAAEGLDVVANKARPMDMDYALSNGFGFG 411 (424)
T ss_pred C-CCCCcee-ECcccchhhhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCccccccccCCCcccCcCEEEEeeecCC
Confidence 6 2222311 245678899887775544432 3334321 12356777899999
Q ss_pred HHhheeeeEE
Q 010144 465 FKCNNCVWEV 474 (517)
Q Consensus 465 ~t~~a~vlr~ 474 (517)
-+..+++++.
T Consensus 412 G~n~~~il~~ 421 (424)
T PRK06333 412 GVNASILFRR 421 (424)
T ss_pred CeeEEEEEec
Confidence 8888887764
|
|
| >PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.31 E-value=4.8e-10 Score=119.98 Aligned_cols=311 Identities=11% Similarity=0.027 Sum_probs=181.1
Q ss_pred CceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCC---------CcCCCCC---
Q 010144 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRN---------VVEGREE--- 150 (517)
Q Consensus 83 ~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~---------~~~~~~~--- 150 (517)
++|.|+|+|+..|.. .+.+++.+.+..- ++||.....++.. +...++.
T Consensus 4 ~~VvItG~g~~~p~g----~~~~~~w~~L~~g----------------~s~i~~~~~~~~~~~~~~~~g~i~~~~~~~~~ 63 (414)
T PRK08722 4 RRVVVTGMGMLSPVG----NTVESSWKALLAG----------------QSGIVNIEHFDTTNFSTRFAGLVKDFNCEEYM 63 (414)
T ss_pred CCEEEEeeEEECCCC----CCHHHHHHHHHhC----------------CCeeeecCccccccCCCceeEEcCCCChhHcC
Confidence 689999999999998 7888888765321 1222211100000 0000000
Q ss_pred CccHHHhHhhHHHHHHHHHHHHHHhCCCCCCCcC----EEEEeecC------------------CC--------CCC-cH
Q 010144 151 SPSLAEAFSEMDEIIFDTLDKLFARTDISPSEID----VLVVNVSL------------------FS--------PAP-SL 199 (517)
Q Consensus 151 ~~~m~~~~~ea~~la~~Aa~~aL~~agi~p~dID----~LI~a~s~------------------~~--------~~P-s~ 199 (517)
...-.........++..|+.+||+++|+++++.+ .++++++. .. ..| ..
T Consensus 64 ~~~~~~~~d~~~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~ 143 (414)
T PRK08722 64 SKKDARKMDLFIQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMI 143 (414)
T ss_pred CHHHHhhcCHHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHH
Confidence 0000111123456889999999999999754332 24444321 00 112 36
Q ss_pred HHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCCC----------C-----------
Q 010144 200 TSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNW----------Y----------- 258 (517)
Q Consensus 200 a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~~----------~----------- 258 (517)
+.+|...+|+++ +++.+.. +|++++.||..|.++|++|..+.+||.++|.....+ .
T Consensus 144 a~~is~~~gl~G--p~~ti~~-aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~ 220 (414)
T PRK08722 144 AGNLSIMRGLRG--PNIAIST-ACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKAS 220 (414)
T ss_pred HHHHHHHhCCCC--Ccccccc-ccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccCCCCCcccc
Confidence 788999999975 8888997 999999999999999999999999999999854210 0
Q ss_pred CCCCccccccccccccceEEEEEeecccccccchhhc-cceeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHH
Q 010144 259 CGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKL-NCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAAL 337 (517)
Q Consensus 259 ~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l-~~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~ 337 (517)
.+-|+.. ..++.||||+|+||++......+ +-++ ..+......+|+.. +..+ + +. +.
T Consensus 221 rpfd~~~--~G~~~gEGaaalvLe~~~~A~~~-g~~i~a~i~g~~~~~d~~~---~~~p-------------~-~~--~~ 278 (414)
T PRK08722 221 RPWDKDR--DGFVLGDGAGMMVLEEYEHAKAR-GAKIYAELVGFGMSGDAYH---MTSP-------------S-ED--GS 278 (414)
T ss_pred CcCcCCC--CceEeeceEEEEEEccHHHHHHC-CCeEEEEEEEEEEcCCCCC---CCCC-------------C-cc--hH
Confidence 0112111 25788999999999976543211 1111 11222222223211 1100 0 00 00
Q ss_pred HHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHHH-----HHHhhC
Q 010144 338 AFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVID-----GTGKGL 412 (517)
Q Consensus 338 ~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il~-----~i~~~L 412 (517)
...+.+.+++ +++|++| +|||++..|-.+...-| .+.+.+
T Consensus 279 -------------------------~~~~a~~~Al-------~~agi~~---~did~ie~hgtgt~~~D~~E~~al~~~f 323 (414)
T PRK08722 279 -------------------------GGALAMEAAM-------RDAGVTG---EQIGYVNAHGTSTPAGDVAEIKGIKRAL 323 (414)
T ss_pred -------------------------HHHHHHHHHH-------HHcCCCH---HHcCEEEccCccCCCCCHHHHHHHHHHh
Confidence 0112334455 6789986 89999999987654443 344555
Q ss_pred CCC-cccchhhhhcccCcccchhhHHHHHHHH---HHHcCCCC-------------------------CCCEEEEEEech
Q 010144 413 ELD-EYDLEPARMALHRFGNTSAGGLWYVLGY---MEAKKRLK-------------------------KGDRILMISLGA 463 (517)
Q Consensus 413 gl~-~e~~~~S~~~l~~~GNtsSASi~~~L~~---~~~~g~i~-------------------------~Gd~VlliafG~ 463 (517)
|-. .+++. --.+=..+||+.+|+-.+++.. ++++|.+. +-.+++.-+||.
T Consensus 324 g~~~~~~~~-v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~~~~v~~~~~~~~~~~~~l~nsfGf 402 (414)
T PRK08722 324 GEAGSKQVL-VSSTKSMTGHLLGAAGSVEAIITVMSLVDQIVPPTINLDDPEEGLDIDLVPHTARKVESMEYAICNSFGF 402 (414)
T ss_pred cccCCCCce-eeCcccccccchHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCCCccccCCCCCEEEEecccC
Confidence 532 22231 0233467899999887777632 34443211 124567778999
Q ss_pred hHHhheeeeEE
Q 010144 464 GFKCNNCVWEV 474 (517)
Q Consensus 464 G~t~~a~vlr~ 474 (517)
|-+-.+++++.
T Consensus 403 GG~n~~lvl~~ 413 (414)
T PRK08722 403 GGTNGSLIFKK 413 (414)
T ss_pred CCceEEEEEec
Confidence 88888887763
|
|
| >PRK06065 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.8e-10 Score=120.85 Aligned_cols=90 Identities=11% Similarity=0.045 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCC--CCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHc
Q 010144 162 DEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSP--APSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (517)
Q Consensus 162 ~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~--~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~a 239 (517)
.+|+.+|++++|+++|++++|||.+|++++++.. .+..+..+++.+|+. +.+++++.+ ||+++..++..|..++++
T Consensus 30 ~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~-~~~~~~V~~-~gasG~~al~~A~~~I~s 107 (392)
T PRK06065 30 QELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGI-RKPVSRVYV-GGATGVMTAIAGWYHVAS 107 (392)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCC-CCCeEEEec-CchhHHHHHHHHHHHHhC
Confidence 5678999999999999999999999987644322 466888999999997 579999997 999999999999999999
Q ss_pred CCCCEEEEEEecCC
Q 010144 240 YKNKLAIVVSTESM 253 (517)
Q Consensus 240 g~~~~aLVVs~E~~ 253 (517)
|..++||||++|+.
T Consensus 108 G~ad~vLVvg~e~~ 121 (392)
T PRK06065 108 GLCQKVLAVAEEKM 121 (392)
T ss_pred CCCCEEEEEEeecc
Confidence 99999999999974
|
|
| >PRK06158 thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.4e-10 Score=119.98 Aligned_cols=84 Identities=10% Similarity=0.025 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCC
Q 010144 162 DEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYK 241 (517)
Q Consensus 162 ~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~ 241 (517)
.+|+.+|+++||+++|++++|||.+++++. +...|+ ..++++||++ ..+.+++.. ||+++..+|+.|..+|++|.
T Consensus 29 ~eL~~eA~~~Al~dAgl~~~dID~iv~~~~-~~~~~~--~~la~~lGl~-~~~~~~~~~-g~~s~~~al~~A~~~I~sG~ 103 (384)
T PRK06158 29 MELLAQAAHRALADAGLTMADVDGLFTASP-DDALWG--LSVAEYLGIR-PRFVDGTMI-GGSSFLAHLLPAALALEAGL 103 (384)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecC-CCCCcH--HHHHHHcCCC-CeeeccccC-ccHHHHHHHHHHHHHHHcCC
Confidence 467899999999999999999999998753 333454 5799999997 578899986 99999999999999999999
Q ss_pred CCEEEEEEe
Q 010144 242 NKLAIVVST 250 (517)
Q Consensus 242 ~~~aLVVs~ 250 (517)
.++|||+.+
T Consensus 104 ~d~vLV~~g 112 (384)
T PRK06158 104 CDVALICYG 112 (384)
T ss_pred CCEEEEeec
Confidence 999999833
|
|
| >PRK12404 stage V sporulation protein AD; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.3e-10 Score=116.40 Aligned_cols=117 Identities=11% Similarity=0.200 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcC
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTY 240 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag 240 (517)
-.+|+.+|+++||+++|++++|||.+++++..+...|+ ..+++.||++ .+++.+ +|+++..||.+|..++++|
T Consensus 54 E~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~ips--sfvar~LGIP----~~gV~g-ACSTg~eAL~lAa~~VaSG 126 (334)
T PRK12404 54 ERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQITPT--SFAARTLGIP----YLGLFG-ACSTSMEGLALAALIVNSG 126 (334)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcCcH--HHHHHHhCCC----ccceee-cCHHHHHHHHHHHHHHHcC
Confidence 45789999999999999999999999998766555666 4999999964 499998 9999999999999999999
Q ss_pred CCCEEEEEEecCCCC---CCCCC----CCccccccccccccceEEEEEeeccc
Q 010144 241 KNKLAIVVSTESMGP---NWYCG----REKSMMLSNILFRSGGCSMLLTNNRA 286 (517)
Q Consensus 241 ~~~~aLVVs~E~~s~---~~~~~----~dr~~lv~~~lfGDGAAAvLLs~~~~ 286 (517)
..++||++++-.... .|..+ ..|.. +...--=||+|+||++...
T Consensus 127 ~Ad~VLavtsSH~~~aErqfR~P~eyG~Qrp~--taqwTvTgaga~~l~~~~~ 177 (334)
T PRK12404 127 GAKYVLTGASSHNAAVEKQFRYPTEYGGQKPP--TAQWTVTGAGAAILSKTGD 177 (334)
T ss_pred CCCEEEEEeCcccchhhhhccCcccccCcCCC--cccEEEEceEEEEEecCCC
Confidence 999999998766543 22111 12221 2334456899999997653
|
|
| >PLN02287 3-ketoacyl-CoA thiolase | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.5e-10 Score=123.24 Aligned_cols=94 Identities=18% Similarity=0.200 Sum_probs=80.0
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCc-HHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHH
Q 010144 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPAPS-LTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLF 237 (517)
Q Consensus 160 ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s-~~~~~Ps-~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL 237 (517)
...+|+.+|++++|+++|++++|||.+|+++. +....+. .+.++...+|+++.+++++++. +|++++.|+..|...|
T Consensus 70 s~~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~pa~~V~~-~CaSG~~Ai~~Aa~~I 148 (452)
T PLN02287 70 YPDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPVRTVNR-QCSSGLQAVADVAAAI 148 (452)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCcceEEEec-cCchHHHHHHHHHHHH
Confidence 34678999999999999999999999998754 4444444 3456667889986689999997 9999999999999999
Q ss_pred HcCCCCEEEEEEecCCC
Q 010144 238 RTYKNKLAIVVSTESMG 254 (517)
Q Consensus 238 ~ag~~~~aLVVs~E~~s 254 (517)
++|..+.+||++.|.+|
T Consensus 149 ~sG~~dvvLv~GvE~mS 165 (452)
T PLN02287 149 KAGFYDIGIGAGVESMT 165 (452)
T ss_pred HcCCCCeEEEEeEEecC
Confidence 99999999999998765
|
|
| >PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.26 E-value=9e-10 Score=116.63 Aligned_cols=302 Identities=11% Similarity=0.082 Sum_probs=177.8
Q ss_pred CceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccC-CCcCCCCCCccHHHhHhhH
Q 010144 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPR-NVVEGREESPSLAEAFSEM 161 (517)
Q Consensus 83 ~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~-~~~~~~~~~~~m~~~~~ea 161 (517)
++|.|+|+|..-|-. . .+++.+.+.. .++||..-+-++. ....... ........
T Consensus 2 ~rVvITG~G~vsp~G----~-~~~~~~~l~~----------------G~sgi~~~~~~~~~~~~~~~~----~~~~~~~~ 56 (381)
T PRK05952 2 MKVVVTGIGLVSALG----D-LEQSWQRLLQ----------------GKSGIKLHQPFPELPPLPLGL----IGNQPSSL 56 (381)
T ss_pred CeEEEEeeEEECccc----C-HHHHHHHHHc----------------CCCCeEeCCccccccccccee----eccccccc
Confidence 469999999999998 4 7888876532 1234442111100 0000000 00000011
Q ss_pred HHHHHHHHHHHHHhCCCCC--CCcCEEEEeecC---------------C-----C--------CCC-cHHHHHHHHcCCC
Q 010144 162 DEIIFDTLDKLFARTDISP--SEIDVLVVNVSL---------------F-----S--------PAP-SLTSRIINRYNLR 210 (517)
Q Consensus 162 ~~la~~Aa~~aL~~agi~p--~dID~LI~a~s~---------------~-----~--------~~P-s~a~~I~~~LGl~ 210 (517)
..++..|+++||+++|+++ +++++++-++.. . . ..| ..+..|...+|++
T Consensus 57 ~~~~~~a~~~Al~dagl~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~ 136 (381)
T PRK05952 57 EDLTKTVVTAALKDAGLTPPLTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQ 136 (381)
T ss_pred cHHHHHHHHHHHHhcCCCCCCCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCC
Confidence 2345689999999999964 455544432210 0 0 122 2467889999997
Q ss_pred CCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecC-CCCC----C-----C-----CCCCccccccccccccc
Q 010144 211 NDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTES-MGPN----W-----Y-----CGREKSMMLSNILFRSG 275 (517)
Q Consensus 211 ~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~-~s~~----~-----~-----~~~dr~~lv~~~lfGDG 275 (517)
+ +++.+.+ +|++++.||..|.++|++|..+.+||.++|. .+.. + . .+-|+.. ..+++|||
T Consensus 137 G--p~~ti~~-aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~rPfd~~r--~G~v~gEG 211 (381)
T PRK05952 137 G--PVLAPMA-ACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAKTGAYPFDRQR--EGLVLGEG 211 (381)
T ss_pred C--ccccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCCCCCCCCCCCC--CCcccccc
Confidence 5 7899997 9999999999999999999999999999996 3320 0 0 0112111 25789999
Q ss_pred eEEEEEeecccccccchhhc-cceeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHH
Q 010144 276 GCSMLLTNNRALKHKAILKL-NCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLR 354 (517)
Q Consensus 276 AAAvLLs~~~~~~~~~~~~l-~~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~ 354 (517)
|+++||++......+ +-++ ..+......+|+.+. ..+ + |. ++
T Consensus 212 aa~lvLe~~~~A~~r-g~~i~a~I~g~~~~~d~~~~---~~~-----------~---~~--~~----------------- 254 (381)
T PRK05952 212 GAILVLESAELAQKR-GAKIYGQILGFGLTCDAYHM---SAP-----------E---PD--GK----------------- 254 (381)
T ss_pred EEEEEEeeHHHHHhC-CCceEEEEEEEEecCCCCCC---CCC-----------C---CC--HH-----------------
Confidence 999999986442211 1111 112222223332110 000 0 00 00
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHHHH-----HHhhCCCCcccchhhhhcccCc
Q 010144 355 EQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDG-----TGKGLELDEYDLEPARMALHRF 429 (517)
Q Consensus 355 e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il~~-----i~~~Lgl~~e~~~~S~~~l~~~ 429 (517)
.+.+.+++++ +++|+.| +|||++..|..+...-|. +.+-+| +++. -..+=..+
T Consensus 255 --------~~~~ai~~Al-------~~agi~p---~dId~i~~hgtgt~~~D~~E~~al~~~fg---~~~~-v~s~K~~~ 312 (381)
T PRK05952 255 --------SAIAAIQQCL-------ARSGLTP---EDIDYIHAHGTATRLNDQREANLIQALFP---HRVA-VSSTKGAT 312 (381)
T ss_pred --------HHHHHHHHHH-------HHhCCCH---HHeeEEEccCCCCCCCcHHHHHHHHHHcC---CCCe-eecchhhh
Confidence 1223344555 6889986 899999999877655443 344444 1221 02344678
Q ss_pred ccchhhHHHHHHHHH---HHcCCCCC---------------------CCEEEEEEechhHHhheeeeE
Q 010144 430 GNTSAGGLWYVLGYM---EAKKRLKK---------------------GDRILMISLGAGFKCNNCVWE 473 (517)
Q Consensus 430 GNtsSASi~~~L~~~---~~~g~i~~---------------------Gd~VlliafG~G~t~~a~vlr 473 (517)
||+.+|+-.+.+... ++++.+.| =++++..+||.|-.-.+++++
T Consensus 313 GH~~~AaG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~v~~~~~~~~~~~l~~s~gfGG~na~lvl~ 380 (381)
T PRK05952 313 GHTLGASGALGVAFSLLALRHQQLPPCVGLQEPEFDLNFVRQAQQSPLQNVLCLSFGFGGQNAAIALG 380 (381)
T ss_pred ccChHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcCCCcccCCCCEEEEeeecCCCeeEEEEEe
Confidence 999999977776543 44444322 256788999999888887775
|
|
| >PRK07851 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=4.2e-10 Score=120.13 Aligned_cols=93 Identities=11% Similarity=0.185 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHhC-CCCCCCcCEEEEeec-CC-CCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHH
Q 010144 161 MDEIIFDTLDKLFART-DISPSEIDVLVVNVS-LF-SPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLF 237 (517)
Q Consensus 161 a~~la~~Aa~~aL~~a-gi~p~dID~LI~a~s-~~-~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL 237 (517)
..+|+.+|+++||+++ |++|+|||.+|+++. +. ...+..+..++..+|++ +++++.+++ +|+++..|+..|..+|
T Consensus 27 ~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~-~~p~~~v~~-~caSG~~av~~Aa~~I 104 (406)
T PRK07851 27 PDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYD-FLPGTTVNR-YCSSSLQTTRMAFHAI 104 (406)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCC-CCCeeeeec-cchhHHHHHHHHHHHH
Confidence 4677999999999996 999999999998743 22 22356678899999996 689999997 9999999999999999
Q ss_pred HcCCCCEEEEEEecCCCC
Q 010144 238 RTYKNKLAIVVSTESMGP 255 (517)
Q Consensus 238 ~ag~~~~aLVVs~E~~s~ 255 (517)
++|..+.+||++.|.+|.
T Consensus 105 ~sG~~d~vLv~G~e~~s~ 122 (406)
T PRK07851 105 KAGEGDVFISAGVETVSR 122 (406)
T ss_pred HCCCCCEEEEeeEEeccc
Confidence 999999999999897543
|
|
| >PRK06690 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=6.2e-10 Score=116.90 Aligned_cols=245 Identities=13% Similarity=0.114 Sum_probs=158.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcC
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTY 240 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag 240 (517)
+.+|+..|++++++ |++ ++||.+|+++.... .+..+..+...+|++..++++.+++ +|++++.|+..|.+++++|
T Consensus 25 ~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~-~~~~~r~~~~~~Gl~~~~p~~tV~~-~CaSG~~Ai~~a~~~I~sG 99 (361)
T PRK06690 25 VQQLAAPLLTFLSK--GME-REIDDVILGNVVGP-GGNVARLSALEAGLGLHIPGVTIDR-QCGAGLEAIRTACHFIQGG 99 (361)
T ss_pred HHHHHHHHHHHHHc--cch-hhcCEEEEEecCCC-cchHHHHHHHHcCCCCCCCceehhh-hhhHHHHHHHHHHHHHHCC
Confidence 46778999999865 886 89999999764221 2444556889999986799999997 9999999999999999999
Q ss_pred CCCEEEEEEecCCCCC-C----------CCC---------------CCcc------------------------------
Q 010144 241 KNKLAIVVSTESMGPN-W----------YCG---------------REKS------------------------------ 264 (517)
Q Consensus 241 ~~~~aLVVs~E~~s~~-~----------~~~---------------~dr~------------------------------ 264 (517)
..+.+|+++.|.+|.. + +.. -.|+
T Consensus 100 ~~d~~l~gG~E~ms~~p~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~~A~~s~k~a~~a~~n~~~~~ei~~v~ 179 (361)
T PRK06690 100 AGKCYIAGGVESTSTSPFQNRARFSPETIGDPDMGVAAEYVAERYNITREMQDEYACLSYKRTLQALEKGYIHEEILSFN 179 (361)
T ss_pred CCCEEEEeccccccCCCcccccccCcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeccc
Confidence 9999999999998741 1 000 0000
Q ss_pred ---------------------cc---------ccccccccceEEEEEeecccccccchhhcc-ceeeeeeccCcccccce
Q 010144 265 ---------------------MM---------LSNILFRSGGCSMLLTNNRALKHKAILKLN-CLVRTHFGSNDEAYECC 313 (517)
Q Consensus 265 ---------------------~l---------v~~~lfGDGAAAvLLs~~~~~~~~~~~~l~-~i~~t~~~td~~~~~~~ 313 (517)
.+ ...+..+|||+|+||.++...+. .+.+.. .++.....+.
T Consensus 180 ~~~d~~~r~~~~~e~ll~~l~p~~~~~g~lt~~~~~~~~DGAaAvvl~s~e~A~~-lg~~p~~~i~~~~~~~~------- 251 (361)
T PRK06690 180 GLLDESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVNDGACAVLVMEEGQARK-LGYKPVLRFVRSAVVGV------- 251 (361)
T ss_pred CccccccCCCCCHHHHhhcCCCcccCCCceeccccCCCCCCeEEEEEecHHHHHH-cCCCceEEEEEEEEecc-------
Confidence 00 00133478888888886543210 000000 0111100000
Q ss_pred eeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccc
Q 010144 314 MQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIE 393 (517)
Q Consensus 314 ~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did 393 (517)
....+. ......+.+++ +++|++| +|||
T Consensus 252 --------------~~~~~~----------------------------~~~~~a~~~al-------~~Agl~~---~Did 279 (361)
T PRK06690 252 --------------DPNLPG----------------------------TGPIFAVNKLL-------NEMNMKV---EDID 279 (361)
T ss_pred --------------Ccccch----------------------------hHHHHHHHHHH-------HHcCCCH---HHcC
Confidence 000000 00112334455 6889996 8999
Q ss_pred eeecCCCChHHHHHHHhhCCCCcccchhh---hhcccCcccchhhHHHHHHHHHHHcCCCCCCCE-EEEEEechhHHhhe
Q 010144 394 HFCLHPGGRAVIDGTGKGLELDEYDLEPA---RMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDR-ILMISLGAGFKCNN 469 (517)
Q Consensus 394 ~~~~Hq~~~~il~~i~~~Lgl~~e~~~~S---~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~-VlliafG~G~t~~a 469 (517)
+|.+|+..........+.||++++++.++ ....|.+|++|+..++..+.++.++| |.+ +..+..|.|. -.+
T Consensus 280 ~~ei~eafa~~~~~~~e~lgl~~~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql~~~~----~~~g~~~~c~~gG~-g~a 354 (361)
T PRK06690 280 YFEINEAFASKVVACAKELQIPYEKLNVNGGAIALGHPYGASGAMLVTRLFYQAKRED----MKYGIATLGIGGGI-GLA 354 (361)
T ss_pred EeeecchhHHHHHHHHHhcCCCchhcccCCcHHhccCchhhhHHHHHHHHHHHHHHhC----CCEEEEEEcccCcc-eeE
Confidence 99999999999999999999998877421 12378999999999998888886532 222 2333344443 245
Q ss_pred eeeEEe
Q 010144 470 CVWEVM 475 (517)
Q Consensus 470 ~vlr~~ 475 (517)
++++.+
T Consensus 355 ~~~e~~ 360 (361)
T PRK06690 355 LLFEKV 360 (361)
T ss_pred EEEEec
Confidence 666543
|
|
| >PRK08256 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=6.9e-10 Score=117.89 Aligned_cols=89 Identities=18% Similarity=0.195 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHc
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~a 239 (517)
..+|+.+|+++||+++|++++|||.+++++. ++... ...++..+|++ .+++++++. +|++++.|+..|.++|++
T Consensus 22 ~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~---~~~~~~~lGl~-~~~~~~v~~-~caSg~~ai~~A~~~I~s 96 (391)
T PRK08256 22 YPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTS---GQRALYEVGMT-GIPIVNVNN-NCSTGSTALFLARQAVRS 96 (391)
T ss_pred HHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcch---hHHHHHHcCCC-CCCCccccc-ccHHHHHHHHHHHHHHHC
Confidence 3577899999999999999999999988653 22211 23567889996 578899997 999999999999999999
Q ss_pred CCCCEEEEEEecCCC
Q 010144 240 YKNKLAIVVSTESMG 254 (517)
Q Consensus 240 g~~~~aLVVs~E~~s 254 (517)
|..+++||+++|..+
T Consensus 97 G~~d~vLv~g~e~~s 111 (391)
T PRK08256 97 GAADCALALGFEQMQ 111 (391)
T ss_pred CCCCEEEEEEEeecc
Confidence 999999999988765
|
|
| >PRK06025 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=8.2e-10 Score=117.60 Aligned_cols=95 Identities=16% Similarity=0.165 Sum_probs=84.8
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCC-C-CCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHH
Q 010144 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFS-P-APSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLF 237 (517)
Q Consensus 160 ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~-~-~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL 237 (517)
.+.+|+..+++.+++++|++|++||.||+++.... . .+.++.++.-+-|++.+++++.|+. -|+|++.|+.+|.+.|
T Consensus 28 ~~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp~~vp~~tvnr-~C~Sgl~ai~~aa~~I 106 (417)
T PRK06025 28 HPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDIKASGVTLDR-FCGGGITSVNLAAAQI 106 (417)
T ss_pred CHHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCCCCCCeeeecc-ccchHHHHHHHHHHHH
Confidence 34677899999999999999999999999875322 2 3678889999999998999999995 9999999999999999
Q ss_pred HcCCCCEEEEEEecCCCC
Q 010144 238 RTYKNKLAIVVSTESMGP 255 (517)
Q Consensus 238 ~ag~~~~aLVVs~E~~s~ 255 (517)
++|..+-+|..+.|.+|.
T Consensus 107 ~~G~~~~~laGG~EsmS~ 124 (417)
T PRK06025 107 MSGMEDLVIAGGTEMMSY 124 (417)
T ss_pred HcCCCCEEEEeeeeccCC
Confidence 999999999999999986
|
|
| >PLN02644 acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.23 E-value=8.8e-10 Score=117.23 Aligned_cols=93 Identities=15% Similarity=0.141 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCC-CCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHc
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVSLF-SPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~-~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~a 239 (517)
..+|+.+|++++|+++|++++|||.+|+++... ...+..+..+...+|++.+++++.++. +|+++..|+..|..+|++
T Consensus 25 ~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~v~~-~caSg~~av~~Aa~~I~s 103 (394)
T PLN02644 25 ATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLPPSTICTTVNK-VCASGMKAVMLAAQSIQL 103 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCCceEEEec-cchHHHHHHHHHHHHHHc
Confidence 357799999999999999999999999865321 112345556889999976688999997 999999999999999999
Q ss_pred CCCCEEEEEEecCCC
Q 010144 240 YKNKLAIVVSTESMG 254 (517)
Q Consensus 240 g~~~~aLVVs~E~~s 254 (517)
|..+.+||++.|.+|
T Consensus 104 G~~d~vlv~G~E~~s 118 (394)
T PLN02644 104 GINDVVVAGGMESMS 118 (394)
T ss_pred CCCCEEEEEeEEecC
Confidence 999999999988664
|
|
| >PRK07516 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.1e-09 Score=116.28 Aligned_cols=92 Identities=15% Similarity=0.180 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecC-CC--CCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHH
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVSL-FS--PAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLF 237 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s~-~~--~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL 237 (517)
..+|+.+|+++||+++|++++|||.|+++++. .. ..+..+..+...+|++ .++++++++ +|++++.||.+|..++
T Consensus 22 ~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~-~~p~~~v~~-~CaSg~~Al~~A~~~I 99 (389)
T PRK07516 22 LESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALR-FKPATRVEN-ACATGSAAVYAALDAI 99 (389)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCC-CCceeeecc-ccHHHHHHHHHHHHHH
Confidence 35778999999999999999999999987541 11 1111222344566886 789999996 9999999999999999
Q ss_pred HcCCCCEEEEEEecCCC
Q 010144 238 RTYKNKLAIVVSTESMG 254 (517)
Q Consensus 238 ~ag~~~~aLVVs~E~~s 254 (517)
++|..+++||+++|.+|
T Consensus 100 ~sG~~d~vLvvg~e~~s 116 (389)
T PRK07516 100 EAGRARIVLVVGAEKMT 116 (389)
T ss_pred HCCCCCEEEEEEehhhc
Confidence 99999999999999854
|
|
| >cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.1e-09 Score=114.50 Aligned_cols=310 Identities=13% Similarity=0.081 Sum_probs=175.8
Q ss_pred CceEEEEEEEEeCCCCCceecHHHHHHHHHhcc-cCChHHHHHHHHHHHHhCCceeE--eccCCCcCCCCC-CccHHHhH
Q 010144 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNK-KLGLEEYRFLLKNMVSSGIGEET--YGPRNVVEGREE-SPSLAEAF 158 (517)
Q Consensus 83 ~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~-~~~~~~~~~~~ri~~~sGI~~r~--~~~~~~~~~~~~-~~~m~~~~ 158 (517)
++|.|+|+|+..|-. .+.+++.+.+..-. .+.+- .+ +...+...+. ..++ +..... .+......
T Consensus 1 ~~VvItG~G~vsp~G----~~~~~~w~~L~~G~s~i~~~-----~~-~~~~~~~~~~~g~i~~--~~~~~~~~~~~~~~~ 68 (399)
T cd00832 1 RRAVVTGIGVVAPNG----LGVEEYWKAVLDGRSGLGPI-----TR-FDPSGYPARLAGEVPD--FDAAEHLPGRLLPQT 68 (399)
T ss_pred CCEEEEeeEEeCCCC----CCHHHHHHHHHhCCCeEeeC-----Cc-cccccCCCceeEEeCC--cChhhcCCHHHHhhC
Confidence 469999999999998 78888888764311 00000 00 0000111000 0000 000000 01111112
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCcC----EEEEeecC------------------CCCCC---------cHHHHHHHHc
Q 010144 159 SEMDEIIFDTLDKLFARTDISPSEID----VLVVNVSL------------------FSPAP---------SLTSRIINRY 207 (517)
Q Consensus 159 ~ea~~la~~Aa~~aL~~agi~p~dID----~LI~a~s~------------------~~~~P---------s~a~~I~~~L 207 (517)
.....++..|+++||+++|+++++++ .|+++++. ....| ..+.+|...+
T Consensus 69 d~~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 148 (399)
T cd00832 69 DRMTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRH 148 (399)
T ss_pred CHHHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHh
Confidence 33467899999999999999876442 24443321 01011 2467899999
Q ss_pred CCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCC----------CC----------CCCCccccc
Q 010144 208 NLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN----------WY----------CGREKSMML 267 (517)
Q Consensus 208 Gl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~----------~~----------~~~dr~~lv 267 (517)
|+++ +++.+.+ +|++++.||..|.++|+.|. +.+||.++|..... .. .+-|+..
T Consensus 149 gl~G--p~~ti~~-acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~~p~~~~rPFd~~~-- 222 (399)
T cd00832 149 GMRG--PSGVVVA-EQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAA-- 222 (399)
T ss_pred CCCC--Ccccccc-hhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCCCCCCCCCcCCCcCCC--
Confidence 9974 7888887 99999999999999999999 99999998873320 00 0111111
Q ss_pred cccccccceEEEEEeecccccccchhhccc-eeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhc
Q 010144 268 SNILFRSGGCSMLLTNNRALKHKAILKLNC-LVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVL 346 (517)
Q Consensus 268 ~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~-i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~l 346 (517)
..++.|+||+++||++......| +-++.. +......+|+.. .... ++
T Consensus 223 ~G~~~gEGa~~lvLe~~~~A~~r-g~~i~a~i~g~~~~~d~~~-----------------~~~~-----~~--------- 270 (399)
T cd00832 223 AGYVPGEGGAILVLEDAAAARER-GARVYGEIAGYAATFDPPP-----------------GSGR-----PP--------- 270 (399)
T ss_pred CCEeeeceEEEEEEeeHHHHHHC-CCeEEEEEEeEEEcCCCCC-----------------CCCC-----HH---------
Confidence 26789999999999986543211 111111 112222222210 0000 00
Q ss_pred ccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHH-----HHHHhhCCCCcccchh
Q 010144 347 VPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVI-----DGTGKGLELDEYDLEP 421 (517)
Q Consensus 347 gpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il-----~~i~~~Lgl~~e~~~~ 421 (517)
.+.+.+++++ +.+|+.| +|||++..|..+.... +.+.+.+|-. ++.
T Consensus 271 ----------------~~~~a~~~al-------~~ag~~~---~~i~~v~~hgtgt~~~D~~E~~al~~~fg~~--~~p- 321 (399)
T cd00832 271 ----------------GLARAIRLAL-------ADAGLTP---EDVDVVFADAAGVPELDRAEAAALAAVFGPR--GVP- 321 (399)
T ss_pred ----------------HHHHHHHHHH-------HHcCCCH---HHccEEEeccCcCCCCCHHHHHHHHHHhCCC--CCc-
Confidence 1223445555 6889986 8999999998765443 3455556532 221
Q ss_pred hhhcccCcccchhhHHHHHHHHH---HHcCCCC------------------------CCCEEEEEEechhHHhheee
Q 010144 422 ARMALHRFGNTSAGGLWYVLGYM---EAKKRLK------------------------KGDRILMISLGAGFKCNNCV 471 (517)
Q Consensus 422 S~~~l~~~GNtsSASi~~~L~~~---~~~g~i~------------------------~Gd~VlliafG~G~t~~a~v 471 (517)
-..+=..+||+.+|+-.+.+... ++++.+. +-++++.-+||.|-.-.+++
T Consensus 322 v~s~K~~~Gh~~~aaG~~~l~~~~l~l~~~~ipp~~n~~~~~p~~~l~~v~~~~~~~~~~~al~nsfgfGG~na~lv 398 (399)
T cd00832 322 VTAPKTMTGRLYAGGAPLDVATALLALRDGVIPPTVNVTDVPPAYGLDLVTGRPRPAALRTALVLARGRGGFNSALV 398 (399)
T ss_pred eeCCCchhcchHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCcccCCCcccCCCCCEEEEeccCCCCcceEEE
Confidence 02344568999999888877643 3343221 12566777788776655544
|
CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. |
| >PRK06633 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=4.7e-10 Score=119.08 Aligned_cols=95 Identities=11% Similarity=0.245 Sum_probs=82.5
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecC-CCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHH
Q 010144 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVSL-FSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (517)
Q Consensus 160 ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~-~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ 238 (517)
.+.+|+..|++++|+++|++|+|||.+++++.. ...-+..+.+++..+|++.+++++.+++ +|++|+.|+..|..+++
T Consensus 26 ~~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~p~~~V~~-~CaSG~~Ai~~A~~~I~ 104 (392)
T PRK06633 26 PAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPGYTINK-VCGSGLKSVALAANSIM 104 (392)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCccchhhcc-hhHHHHHHHHHHHHHHH
Confidence 346778999999999999999999999997542 2223456677889999986799999997 99999999999999999
Q ss_pred cCCCCEEEEEEecCCCC
Q 010144 239 TYKNKLAIVVSTESMGP 255 (517)
Q Consensus 239 ag~~~~aLVVs~E~~s~ 255 (517)
+|..+.+|+++.|.+|.
T Consensus 105 sG~~dvvla~G~E~ms~ 121 (392)
T PRK06633 105 TGDNEIVIAGGQENMSL 121 (392)
T ss_pred cCCCCEEEEcccccCCC
Confidence 99999999999998874
|
|
| >PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.2e-09 Score=116.55 Aligned_cols=315 Identities=9% Similarity=0.035 Sum_probs=177.9
Q ss_pred CceEEEEEEEEeCCCCCceecHHHHHHHHHhcc-cCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCC-CccHHHhHhh
Q 010144 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNK-KLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREE-SPSLAEAFSE 160 (517)
Q Consensus 83 ~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~-~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~-~~~m~~~~~e 160 (517)
++|.|+|+|+..|-. .+.+++.+.+..-. .+.+- .+.-...++..+....-..+..++. .....+....
T Consensus 2 ~~VvITG~g~vtp~G----~~~~~~~~~L~~g~s~i~~~-----~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~r~~~~ 72 (405)
T PRK09116 2 RRVVVTGMGGVTALG----EDWQTIAARLKAGRNAVRRM-----PEWDRYDGLNTRLAAPIDDFELPAHYTRKKIRSMGR 72 (405)
T ss_pred CCEEEEeeEEECCCC----CCHHHHHHHHHcCCCCEEeC-----CchhhccCCCCceEEEecCcChhHhcCHHHHhhCCH
Confidence 479999999999998 88889888764310 00000 0000001221111100000000000 0001111123
Q ss_pred HHHHHHHHHHHHHHhCCCCC------CCcCEEEEeecC------------------CC--------CCC-cHHHHHHHHc
Q 010144 161 MDEIIFDTLDKLFARTDISP------SEIDVLVVNVSL------------------FS--------PAP-SLTSRIINRY 207 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p------~dID~LI~a~s~------------------~~--------~~P-s~a~~I~~~L 207 (517)
...++..|+++||+++|+.. +++++ +++++. .. ..| ..+.+|...+
T Consensus 73 ~~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv-~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~ 151 (405)
T PRK09116 73 VSLMATRASELALEDAGLLGDPILTDGRMGI-AYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFF 151 (405)
T ss_pred HHHHHHHHHHHHHHHcCCCCccccCCCcEEE-EEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHh
Confidence 46789999999999999842 23433 443311 00 123 2578899999
Q ss_pred CCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCC---------------C-----CCCCCccccc
Q 010144 208 NLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN---------------W-----YCGREKSMML 267 (517)
Q Consensus 208 Gl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~---------------~-----~~~~dr~~lv 267 (517)
|+++ +++.+.+ +|++++.||..|.++|++|..+.+||.++|..+.. . ..+-|++.
T Consensus 152 ~~~G--p~~ti~~-acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~~~-- 226 (405)
T PRK09116 152 GLKG--RVIPTSS-ACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTEAAVFDTLFATSTRNDAPELTPRPFDANR-- 226 (405)
T ss_pred CCCC--Ccccccc-hhhhHHHHHHHHHHHHHcCCCCEEEEecchhcChHHHHHHHHhhhhccCCCCCCCCCCCCcCCC--
Confidence 9975 8899998 99999999999999999999999999999975420 0 00112111
Q ss_pred cccccccceEEEEEeecccccccchhhcc-ceeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhc
Q 010144 268 SNILFRSGGCSMLLTNNRALKHKAILKLN-CLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVL 346 (517)
Q Consensus 268 ~~~lfGDGAAAvLLs~~~~~~~~~~~~l~-~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~l 346 (517)
..++.|+||+++||++......| +-++. .+......+|+.+ +..+ + +
T Consensus 227 ~G~v~gEGa~~~vLe~~~~A~~r-ga~i~a~i~g~~~~~d~~~---~~~p-------------~-~-------------- 274 (405)
T PRK09116 227 DGLVIGEGAGTLVLEELEHAKAR-GATIYAEIVGFGTNSDGAH---VTQP-------------Q-A-------------- 274 (405)
T ss_pred CCEeeeccEEEEEEccHHHHHhC-CCceEEEEEEEEEcCCCCc---CCCC-------------C-H--------------
Confidence 26788999999999975432111 11111 1122222222210 0000 0 0
Q ss_pred ccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHH-----HHHHHhhCCCCcccchh
Q 010144 347 VPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAV-----IDGTGKGLELDEYDLEP 421 (517)
Q Consensus 347 gpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~i-----l~~i~~~Lgl~~e~~~~ 421 (517)
..+.+.+.+++ +++++.| +|||++..|..+... ...+.+.+|- ++.
T Consensus 275 ---------------~~~~~ai~~AL-------~~Agi~p---~dId~I~~Hgtgt~~~D~~E~~Ai~~~fg~---~~p- 325 (405)
T PRK09116 275 ---------------ETMQIAMELAL-------KDAGLAP---EDIGYVNAHGTATDRGDIAESQATAAVFGA---RMP- 325 (405)
T ss_pred ---------------HHHHHHHHHHH-------HHhCCCH---HHcCEEECcCccCCCCCHHHHHHHHHHhCC---CCe-
Confidence 01223344555 6788986 899999999765433 3445566662 121
Q ss_pred hhhcccCcccchhhHHHHHHHH---HHHcCCC-------------------------CCCCEEEEEEechhHHhheeeeE
Q 010144 422 ARMALHRFGNTSAGGLWYVLGY---MEAKKRL-------------------------KKGDRILMISLGAGFKCNNCVWE 473 (517)
Q Consensus 422 S~~~l~~~GNtsSASi~~~L~~---~~~~g~i-------------------------~~Gd~VlliafG~G~t~~a~vlr 473 (517)
-..+=..+||+.+|+-.+.+.. +++.|.+ .+.+.++..+||.|-.-.+++++
T Consensus 326 v~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ippt~~~~~~~~~~~~l~~v~~~~~~~~~~~~l~nsfGfGG~n~~lvl~ 405 (405)
T PRK09116 326 ISSLKSYFGHTLGACGALEAWMSIEMMNEGWFAPTLNLTQVDPACGALDYIMGEAREIDTEYVMSNNFAFGGINTSLIFK 405 (405)
T ss_pred eECcchhhcccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCcccCccCCCCccCCCCEEEEeeecCCcccEEEEEC
Confidence 0234467899977776655532 2333322 12356788999999888887764
|
|
| >PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.22 E-value=4.5e-09 Score=112.20 Aligned_cols=307 Identities=12% Similarity=0.078 Sum_probs=177.8
Q ss_pred CceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccC---------CCcCCCC-C--
Q 010144 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPR---------NVVEGRE-E-- 150 (517)
Q Consensus 83 ~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~---------~~~~~~~-~-- 150 (517)
++|.|+|+|+..|-. .+.+++.+.+..- ++||..-..... .+...++ .
T Consensus 2 ~~v~ItG~g~vsp~G----~~~~~~~~~L~~G----------------~s~i~~~~~~~~~~~~~~~~g~i~~f~~~~~~ 61 (406)
T PRK08439 2 KRVVVTGIGMINSLG----LNKESSFKAICNG----------------ECGIKKITLFDASDFPVQIAGEITDFDPTEVM 61 (406)
T ss_pred CCEEEEeeEEECCCc----CCHHHHHHHHHcC----------------CCceEeCCCccccCCCCceeEEcCCcChhhcC
Confidence 479999999999998 7888888776431 122221100000 0000000 0
Q ss_pred CccHHHhHhhHHHHHHHHHHHHHHhCCCCCCCcCE----EEEeecCC--------------------------CCCC-cH
Q 010144 151 SPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDV----LVVNVSLF--------------------------SPAP-SL 199 (517)
Q Consensus 151 ~~~m~~~~~ea~~la~~Aa~~aL~~agi~p~dID~----LI~a~s~~--------------------------~~~P-s~ 199 (517)
.+...........++..|+++||+++|+++++++. ++++++.. ...| ..
T Consensus 62 ~~~~~~~~~~~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (406)
T PRK08439 62 DPKEVKKADRFIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNML 141 (406)
T ss_pred CHHHHhhcCHHHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHH
Confidence 01111122345789999999999999999877752 34432110 0112 46
Q ss_pred HHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCCC---------------------C
Q 010144 200 TSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNW---------------------Y 258 (517)
Q Consensus 200 a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~~---------------------~ 258 (517)
+..|...+|+++ +++.+.+ +|++++.||..|.++|++|..+.+||+++|.....+ .
T Consensus 142 a~~is~~~gl~G--p~~~~~~-acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~ 218 (406)
T PRK08439 142 GGFISIEHGLKG--PNLSSVT-ACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKAS 218 (406)
T ss_pred HHHHHHHhCCCC--Ccccccc-HhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccCCCCCccCc
Confidence 788999999984 6788886 999999999999999999999999999999631100 0
Q ss_pred CCCCccccccccccccceEEEEEeecccccccchhhccc-eeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHH
Q 010144 259 CGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNC-LVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAAL 337 (517)
Q Consensus 259 ~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~-i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~ 337 (517)
.+-|+.. ..+++|+||+++||++......+ +-++.. +.......|+. .+...-|+
T Consensus 219 rpfd~~~--~G~v~gEGa~~lvLe~~~~A~~r-g~~i~a~i~g~~~~~d~~-----------------~~~~p~~~---- 274 (406)
T PRK08439 219 RPFDKDR--DGFVMGEGAGALVLEEYESAKKR-GAKIYAEIIGFGESGDAN-----------------HITSPAPE---- 274 (406)
T ss_pred CCccCCC--CcEEeeCceEEEEEccHHHHHHC-CCeEEEEEEeEEccCCCC-----------------CCCCCCHH----
Confidence 0111111 25789999999999975432111 111111 11111111110 00000010
Q ss_pred HHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHH-----HHHHhhC
Q 010144 338 AFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVI-----DGTGKGL 412 (517)
Q Consensus 338 ~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il-----~~i~~~L 412 (517)
...+.+++++ +.+++ +|||++..|-.+...- ..+.+.+
T Consensus 275 -------------------------~~~~a~~~al-------~~ag~-----~~i~~v~~hgtgt~~~D~~E~~al~~~f 317 (406)
T PRK08439 275 -------------------------GPLRAMKAAL-------EMAGN-----PKIDYINAHGTSTPYNDKNETAALKELF 317 (406)
T ss_pred -------------------------HHHHHHHHHH-------HHcCC-----CccCEEEccCCcCCCCCHHHHHHHHHHh
Confidence 0113334444 45554 5899999998765443 3345555
Q ss_pred CCCcccchhhhhcccCcccchhhHHHHHHHH---HHHcCCCC------------------------CCCEEEEEEechhH
Q 010144 413 ELDEYDLEPARMALHRFGNTSAGGLWYVLGY---MEAKKRLK------------------------KGDRILMISLGAGF 465 (517)
Q Consensus 413 gl~~e~~~~S~~~l~~~GNtsSASi~~~L~~---~~~~g~i~------------------------~Gd~VlliafG~G~ 465 (517)
|-..... +-..+=..+||+.+|+-.+.+.. ++++|.+. +-..++.-+||.|-
T Consensus 318 ~~~~~~~-~v~s~K~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nsfgfGG 396 (406)
T PRK08439 318 GSKEKVP-PVSSTKGQIGHCLGAAGAIEAVISIMAMRDGILPPTINQETPDPECDLDYIPNVARKAELNVVMSNSFGFGG 396 (406)
T ss_pred cccCCCC-eEECcccccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCCcccCCCccccCCCCEEEEeeecCCC
Confidence 5322221 10133356899999987765542 23444221 22457888999998
Q ss_pred HhheeeeEE
Q 010144 466 KCNNCVWEV 474 (517)
Q Consensus 466 t~~a~vlr~ 474 (517)
.-++++++.
T Consensus 397 ~n~~lvl~~ 405 (406)
T PRK08439 397 TNGVVIFKK 405 (406)
T ss_pred ceEEEEEec
Confidence 888888863
|
|
| >PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II | Back alignment and domain information |
|---|
Probab=99.21 E-value=2.6e-09 Score=117.53 Aligned_cols=319 Identities=9% Similarity=0.045 Sum_probs=180.7
Q ss_pred CceEEEEEEEEeCCCCCceecHHHHHHHHHhcc-cCChHHHHHHHHHHHHhCCceeEeccCC-CcCCCC-CCccHHHhHh
Q 010144 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNK-KLGLEEYRFLLKNMVSSGIGEETYGPRN-VVEGRE-ESPSLAEAFS 159 (517)
Q Consensus 83 ~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~-~~~~~~~~~~~ri~~~sGI~~r~~~~~~-~~~~~~-~~~~m~~~~~ 159 (517)
++|.|+|+|+..|-. .+.+++.+.+..-. .+.+ . +++ ....+..+ +...- .+..+. -.+.......
T Consensus 129 ~rVvITG~G~vtp~G----~~~~~~w~~L~~G~s~i~~--~---~~f-~~~~~~~~-~ag~i~~f~~~~~l~~k~~r~md 197 (540)
T PLN02787 129 RRVVVTGMGVVSPLG----HDPDVFYNNLLEGVSGISE--I---ERF-DCSQFPTR-IAGEIKSFSTDGWVAPKLSKRMD 197 (540)
T ss_pred CCEEEEeeEEECCCC----CCHHHHHHHHHcCCCcccc--c---Ccc-chhhCCcc-ccccccccChhhcCCHHHHHhCC
Confidence 589999999999998 78888888764310 0000 0 000 00111111 00000 000000 0011111123
Q ss_pred hHHHHHHHHHHHHHHhCCCCCC---CcC----EEEEeecC-C------------------CC------CC-cHHHHHHHH
Q 010144 160 EMDEIIFDTLDKLFARTDISPS---EID----VLVVNVSL-F------------------SP------AP-SLTSRIINR 206 (517)
Q Consensus 160 ea~~la~~Aa~~aL~~agi~p~---dID----~LI~a~s~-~------------------~~------~P-s~a~~I~~~ 206 (517)
....++..|+++||+++|++++ +++ .|+++++. . ++ .+ ..+.+|...
T Consensus 198 ~~~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~ 277 (540)
T PLN02787 198 KFMLYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMD 277 (540)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHH
Confidence 3457889999999999998764 221 34444321 0 00 11 236789999
Q ss_pred cCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCCC---------------------CCCCCccc
Q 010144 207 YNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNW---------------------YCGREKSM 265 (517)
Q Consensus 207 LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~~---------------------~~~~dr~~ 265 (517)
+|+++ +++.+.+ +|++++.||..|.++|+.|..+.+||.++|.....+ ..+-|+..
T Consensus 278 ~gl~G--p~~tist-ACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPFD~~r 354 (540)
T PLN02787 278 LGWMG--PNYSIST-ACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWDMNR 354 (540)
T ss_pred hCCCC--Ccccccc-ccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCcccCC
Confidence 99974 7888997 999999999999999999999999999999632100 01112111
Q ss_pred cccccccccceEEEEEeecccccccchhhccc-eeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhh
Q 010144 266 MLSNILFRSGGCSMLLTNNRALKHKAILKLNC-LVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQ 344 (517)
Q Consensus 266 lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~-i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~ 344 (517)
..+++|+||+++||++......+ +-++.. +......+|+.+ +..+. |+ +
T Consensus 355 --dGfv~GEGAa~lVLE~~e~A~~r-Ga~IyA~I~G~g~s~Da~~---~t~p~--------------p~--g-------- 404 (540)
T PLN02787 355 --DGFVMGEGAGVLLLEELEHAKKR-GANIYAEFLGGSFTCDAYH---MTEPH--------------PE--G-------- 404 (540)
T ss_pred --CCcccccceEEEEEeeHHHHHHC-CCeeEEEEEEEEEecCCCC---CCCCC--------------cC--H--------
Confidence 26789999999999975432111 111111 122222233211 11100 00 0
Q ss_pred hcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHH-----HHHHhhCCCCcccc
Q 010144 345 VLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVI-----DGTGKGLELDEYDL 419 (517)
Q Consensus 345 ~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il-----~~i~~~Lgl~~e~~ 419 (517)
. .+.+.++++| +++|+.| +|||++..|..+...- ..+.+.+|-.+ .+
T Consensus 405 ---------~--------g~~~am~~AL-------~~AGl~p---~dIdyInaHGTGT~~gD~~E~~Ai~~~Fg~~~-~~ 456 (540)
T PLN02787 405 ---------A--------GVILCIEKAL-------AQSGVSK---EDVNYINAHATSTKAGDLKEYQALMRCFGQNP-EL 456 (540)
T ss_pred ---------H--------HHHHHHHHHH-------HHcCCCH---HHCcEEEccCccCCCCCHHHHHHHHHHhCCCC-Cc
Confidence 0 0223445555 6889996 9999999998765443 34455566322 22
Q ss_pred hhhhhcccCcccchhhHHHHHHHH---HHHcCCCC-------------------------CCCEEEEEEechhHHhheee
Q 010144 420 EPARMALHRFGNTSAGGLWYVLGY---MEAKKRLK-------------------------KGDRILMISLGAGFKCNNCV 471 (517)
Q Consensus 420 ~~S~~~l~~~GNtsSASi~~~L~~---~~~~g~i~-------------------------~Gd~VlliafG~G~t~~a~v 471 (517)
. --.+=..+||+.+|+-.+++.. ++++|.+. +-+.++.-+||.|-.-.+++
T Consensus 457 p-V~S~Ks~iGH~~gAAGa~eli~~~lal~~g~iPPt~n~~~pd~~~~~~~~v~~~~~~~~ir~aL~nSfGFGG~Naslv 535 (540)
T PLN02787 457 R-VNSTKSMIGHLLGAAGAVEAIATVQAIRTGWVHPNINLENPESGVDTKVLVGPKKERLDIKVALSNSFGFGGHNSSIL 535 (540)
T ss_pred e-eeCCCCCcCCCcccchHHHHHHHHHHHhcCCcCCCCCCCCCCccCCcccccccccccCCcCEEEEeeecCCceeEEEE
Confidence 1 0234467899988876665543 34444321 12446778899998888888
Q ss_pred eEE
Q 010144 472 WEV 474 (517)
Q Consensus 472 lr~ 474 (517)
++.
T Consensus 536 l~~ 538 (540)
T PLN02787 536 FAP 538 (540)
T ss_pred EEe
Confidence 764
|
|
| >PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=99.21 E-value=6.1e-09 Score=110.69 Aligned_cols=208 Identities=14% Similarity=0.015 Sum_probs=132.5
Q ss_pred CcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCC--------------CCCCCC
Q 010144 197 PSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN--------------WYCGRE 262 (517)
Q Consensus 197 Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~--------------~~~~~d 262 (517)
+..+..|+..||+++ +++.+.. +|++++.||..|.++|++|..+.+||+++|..+.. +..+.|
T Consensus 137 ~~~a~~ia~~lgl~G--p~~~i~~-acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~~~~~~~~~~~~~l~~~~~~Pfd 213 (392)
T PRK09185 137 GSLADFLRAYLGLSG--PAYTIST-ACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCRLTLNGFNSLESLSPQPCRPFS 213 (392)
T ss_pred cHHHHHHHHHhCCCC--CcccccC-hhHHHHHHHHHHHHHHHcCCCCEEEEeeccccChHHHHHHHhccccCCCccCCCc
Confidence 357889999999974 8899997 99999999999999999999999999999964431 001111
Q ss_pred ccccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhh
Q 010144 263 KSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMN 342 (517)
Q Consensus 263 r~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~ 342 (517)
... ...++||||+++||++.... ..+ +......+|+.. ...+ + |. +
T Consensus 214 ~~~--~G~~~gEGaa~vVLe~~~~~----~~~---I~g~g~~~d~~~---~~~~-------------~-~~--~------ 259 (392)
T PRK09185 214 ANR--DGINIGEAAAFFLLEREDDA----AVA---LLGVGESSDAHH---MSAP-------------H-PE--G------ 259 (392)
T ss_pred CCC--CccceeceEEEEEEEEcCCC----cEE---EEEEEEeCCCCC---CCCC-------------C-CC--H------
Confidence 110 25789999999999987322 111 222222233211 0000 0 00 0
Q ss_pred hhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHH-----HHHHhhCCCCcc
Q 010144 343 LQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVI-----DGTGKGLELDEY 417 (517)
Q Consensus 343 i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il-----~~i~~~Lgl~~e 417 (517)
. ...+.+.+++ +.+|+.| +|||++..|..+...- ..+.+.+|-..
T Consensus 260 -----------~--------~~~~a~~~Al-------~~Agl~~---~dId~v~~hgtgt~~~D~~E~~al~~~f~~~~- 309 (392)
T PRK09185 260 -----------L--------GAILAMQQAL-------ADAGLAP---ADIGYINLHGTATPLNDAMESRAVAAVFGDGV- 309 (392)
T ss_pred -----------H--------HHHHHHHHHH-------HHcCCCH---HHccEEEeCCCCCcCCCHHHHHHHHHHhCCCC-
Confidence 0 0113344455 6789986 8999999998775533 33444554211
Q ss_pred cchhhhhcccCcccchhhHHHHHHHHH---HHcCCCC------------------------CCCEEEEEEechhHHhhee
Q 010144 418 DLEPARMALHRFGNTSAGGLWYVLGYM---EAKKRLK------------------------KGDRILMISLGAGFKCNNC 470 (517)
Q Consensus 418 ~~~~S~~~l~~~GNtsSASi~~~L~~~---~~~g~i~------------------------~Gd~VlliafG~G~t~~a~ 470 (517)
-+ -.+=..+||+.+|+-.+.|... +++|.+. +-++++.-+||.|-.-.++
T Consensus 310 pv---~s~K~~~Gh~~~AaG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~gfgG~n~~l 386 (392)
T PRK09185 310 PC---SSTKGLTGHTLGAAGAVEAAICWLALRHGLPPHGWNTGQPDPALPPLYLVENAQALAIRYVLSNSFAFGGNNCSL 386 (392)
T ss_pred ce---eCCCcccccChhhcchHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccccCCCCccCCCCEEEEeCccCCceeEEE
Confidence 12 2334568999999877766543 3333221 1357888999999988888
Q ss_pred eeEE
Q 010144 471 VWEV 474 (517)
Q Consensus 471 vlr~ 474 (517)
+++.
T Consensus 387 vl~~ 390 (392)
T PRK09185 387 IFGR 390 (392)
T ss_pred EEEe
Confidence 8864
|
|
| >PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase | Back alignment and domain information |
|---|
Probab=99.21 E-value=2e-09 Score=115.98 Aligned_cols=253 Identities=10% Similarity=0.003 Sum_probs=150.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCC-----CcCEEEEeecCC------------------CC--------CC-cHHHHHHHHcC
Q 010144 161 MDEIIFDTLDKLFARTDISPS-----EIDVLVVNVSLF------------------SP--------AP-SLTSRIINRYN 208 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~-----dID~LI~a~s~~------------------~~--------~P-s~a~~I~~~LG 208 (517)
...++..|+.+||+++|+++. +...++++++.. .. .+ ..+.+|...+|
T Consensus 93 ~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~g 172 (437)
T PLN02836 93 FIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYG 172 (437)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHhC
Confidence 457899999999999998642 345566654210 00 11 24678999999
Q ss_pred CCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCC----------------------CCCCCCcccc
Q 010144 209 LRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN----------------------WYCGREKSMM 266 (517)
Q Consensus 209 l~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~----------------------~~~~~dr~~l 266 (517)
+++ +++.+.+ +|++++.||..|.++|++|..+.+||.++|..... ...+-|+..
T Consensus 173 l~G--p~~tv~~-acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~pfd~~~- 248 (437)
T PLN02836 173 FQG--PNHAAVT-ACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDCDR- 248 (437)
T ss_pred CCC--ceeceeC-hhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCcccccCCcccCC-
Confidence 974 8889998 99999999999999999999999999988863210 000111111
Q ss_pred ccccccccceEEEEEeecccccccchhhc-cceeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhh
Q 010144 267 LSNILFRSGGCSMLLTNNRALKHKAILKL-NCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQV 345 (517)
Q Consensus 267 v~~~lfGDGAAAvLLs~~~~~~~~~~~~l-~~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~ 345 (517)
..++.||||+|+||++......+ +-++ ..+......+|+.+ +..+ ...+
T Consensus 249 -~G~~~gEGaaalVLe~~~~A~~~-g~~i~a~I~g~~~~~d~~~---~~~p----------------~~~~--------- 298 (437)
T PLN02836 249 -DGFVIGEGAGVLVLEELEHAKRR-GAKIYAEVRGYGMSGDAHH---ITQP----------------HEDG--------- 298 (437)
T ss_pred -CCeeeecCEEEEEEeeHHHHHHC-CCceEEEEEeeeecCCCCC---CcCC----------------Ccch---------
Confidence 25789999999999976443211 1000 11222222222110 1000 0000
Q ss_pred cccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHHHH-----HHhhCCCCc--cc
Q 010144 346 LVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDG-----TGKGLELDE--YD 418 (517)
Q Consensus 346 lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il~~-----i~~~Lgl~~--e~ 418 (517)
. ...+.+.+++ +++|+.| +|||++..|..+...-|. +.+.+|=.. ..
T Consensus 299 --------~--------~~~~a~~~Al-------~~Agi~~---~dId~ve~hgtgt~~~D~~E~~ai~~~~~~~~~~~~ 352 (437)
T PLN02836 299 --------R--------GAVLAMTRAL-------QQSGLHP---NQVDYVNAHATSTPLGDAVEARAIKTVFSEHATSGG 352 (437)
T ss_pred --------H--------HHHHHHHHHH-------HHcCCCH---hHcCEEEccCCcCcCcCHHHHHHHHHHhcccccCCC
Confidence 0 0123344455 6889986 899999999876543333 344443211 11
Q ss_pred chhhhhcccCcccchhhHHHHHHHH---HHHcCCCC-------------------------CCCEEEEEEechhHHhhee
Q 010144 419 LEPARMALHRFGNTSAGGLWYVLGY---MEAKKRLK-------------------------KGDRILMISLGAGFKCNNC 470 (517)
Q Consensus 419 ~~~S~~~l~~~GNtsSASi~~~L~~---~~~~g~i~-------------------------~Gd~VlliafG~G~t~~a~ 470 (517)
+.. -.+-..+||+.+|+-.+.|.. .++.|.+. +-+.++.-+||.|-.-.++
T Consensus 353 ~~v-~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~~~~~~~~~~~~~~~~~~l~nsfgfGG~na~l 431 (437)
T PLN02836 353 LAF-SSTKGATGHLLGAAGAVEAIFSVLAIHHGIAPPTLNLERPDPIFDDGFVPLTASKAMLIRAALSNSFGFGGTNASL 431 (437)
T ss_pred Cee-ECCcccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCcccCCCCCCccEEEEecccCCCeeEEE
Confidence 210 123456799988877665443 23344221 1234566689999888888
Q ss_pred eeEE
Q 010144 471 VWEV 474 (517)
Q Consensus 471 vlr~ 474 (517)
+++.
T Consensus 432 vl~~ 435 (437)
T PLN02836 432 LFTS 435 (437)
T ss_pred EEec
Confidence 8764
|
|
| >PRK06289 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.2e-09 Score=116.46 Aligned_cols=89 Identities=19% Similarity=0.205 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCC-----CcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHH
Q 010144 162 DEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPA-----PSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQ 235 (517)
Q Consensus 162 ~~la~~Aa~~aL~~agi~p~dID~LI~a~s-~~~~~-----Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~ 235 (517)
.+|+.+|++++|+++|++|+|||.+|++++ +++.. |+....++ .++. .++++++++ +|++++.||..|..
T Consensus 27 ~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~~--~~~~-g~~~~~v~~-~Casg~~al~~Aa~ 102 (403)
T PRK06289 27 ADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATVH--PALW-GVPASRHEA-ACASGSVATLAAMA 102 (403)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHHh--hcCC-CCceeeccc-ccHHHHHHHHHHHH
Confidence 567899999999999999999999998753 44322 23333222 3443 468999997 99999999999999
Q ss_pred HHHcCCCCEEEEEEecCCC
Q 010144 236 LFRTYKNKLAIVVSTESMG 254 (517)
Q Consensus 236 lL~ag~~~~aLVVs~E~~s 254 (517)
++++|..++|||+++|..+
T Consensus 103 ~I~sG~~~~VLvvg~e~~s 121 (403)
T PRK06289 103 DLRAGRYDVALVVGVELMK 121 (403)
T ss_pred HHHcCCCCEEEEEEEEecC
Confidence 9999999999999999754
|
|
| >PRK07850 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.6e-09 Score=114.92 Aligned_cols=94 Identities=16% Similarity=0.221 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecC-CCC-CCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHH
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVSL-FSP-APSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s~-~~~-~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ 238 (517)
+.+|+.+|++++|+++|++|+|||.+++++.. ... ....+..+...+|++.+++++.+++ +|++++.|+.+|...|+
T Consensus 26 ~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~p~~tV~~-~CaSG~~A~~~A~~~I~ 104 (387)
T PRK07850 26 AAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHVGATTIDC-QCGSAQQANHLVAGLIA 104 (387)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCCceEEEec-ccccHHHHHHHHHHHHH
Confidence 46789999999999999999999999998653 222 1335567778899986799999997 99999999999999999
Q ss_pred cCCCCEEEEEEecCCCC
Q 010144 239 TYKNKLAIVVSTESMGP 255 (517)
Q Consensus 239 ag~~~~aLVVs~E~~s~ 255 (517)
+|..+.+|+++.|.+|.
T Consensus 105 sG~~dvvla~G~E~mS~ 121 (387)
T PRK07850 105 AGAIDVGIACGVEAMSR 121 (387)
T ss_pred CCCCCEEEEEeEecCCC
Confidence 99999999999999865
|
|
| >PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.2e-08 Score=108.74 Aligned_cols=302 Identities=12% Similarity=0.021 Sum_probs=178.7
Q ss_pred hcCCCceEEEEEEEEeCCCCCceecHHHHHHHHHh--cc-cCChHHHHHHHHHHHHhCCceeEeccCCCc--CCCCCCcc
Q 010144 79 QKRGQCCYMLAYECYKPCDETRRLDTESCARVVWR--NK-KLGLEEYRFLLKNMVSSGIGEETYGPRNVV--EGREESPS 153 (517)
Q Consensus 79 ~~~~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~--~~-~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~--~~~~~~~~ 153 (517)
|...++|.|+|+|+..|-. .+.+++.+.+.. ++ .++... + ..... ...++-.. ..+. ..
T Consensus 2 ~~~~~rVvITGiG~vsp~G----~~~e~~w~aL~~G~sg~~~~~~~--~-------~~~~~-~~~~~~~~~~~~~~--~~ 65 (398)
T PRK06519 2 RMQPNDVVITGIGLVSSLG----EGLDAHWNALSAGRPQPNVDTET--F-------APYPV-HPLPEIDWSQQIPK--RG 65 (398)
T ss_pred CCCCCCEEEEcceEECCCC----CCHHHHHHHHHcCCCCCCCCccc--c-------cCcCc-ccccccChhhcCCc--hh
Confidence 4557789999999999998 899999987743 21 111100 0 00000 00000000 0000 00
Q ss_pred HHHhHhhHHHHHHHHHHHHHHhCCCCCC-----CcCEEEEeecCCC-----------------------------CCC--
Q 010144 154 LAEAFSEMDEIIFDTLDKLFARTDISPS-----EIDVLVVNVSLFS-----------------------------PAP-- 197 (517)
Q Consensus 154 m~~~~~ea~~la~~Aa~~aL~~agi~p~-----dID~LI~a~s~~~-----------------------------~~P-- 197 (517)
..........++..|+++||+++|+++. ++++++-++.... ..|
T Consensus 66 ~~r~~~r~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 145 (398)
T PRK06519 66 DQRQMETWQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTL 145 (398)
T ss_pred hhhccCHHHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhh
Confidence 0011123567889999999999998543 4444443321110 011
Q ss_pred -------cHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCC----------CC--
Q 010144 198 -------SLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN----------WY-- 258 (517)
Q Consensus 198 -------s~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~----------~~-- 258 (517)
..+..|...+|+++ +++.+.+ +|++++.||..|.++|++|..+.+||.++|..... ..
T Consensus 146 ~~~~~~n~~a~~is~~~gl~G--p~~ti~~-acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls~ 222 (398)
T PRK06519 146 FLAQLSNLLAGNISIVHKVTG--SSRTFMG-EESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLK 222 (398)
T ss_pred hhhhhhhHHHHHHHHHhCCCC--ccccccC-CccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccCC
Confidence 24678899999975 8899998 99999999999999999999999999999863210 01
Q ss_pred ----CCCC-----ccccccccccccceEEEEEeecccccccchhhccceeeeeec--cCcccccceeeccccCCCCCccc
Q 010144 259 ----CGRE-----KSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFG--SNDEAYECCMQVEDQQGHPGFRL 327 (517)
Q Consensus 259 ----~~~d-----r~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~--td~~~~~~~~~~~~~~g~~g~~l 327 (517)
+..| |+ .++.|+||+++||++......| +- .+.....+ +|. .+.
T Consensus 223 ~~~~p~~d~~~~~r~----G~v~GEGAa~lvLE~~~~A~~R-ga---~i~AeI~G~~~d~------------~~~----- 277 (398)
T PRK06519 223 GGWAPVWSRGGEDGG----GFILGSGGAFLVLESREHAEAR-GA---RPYARISGVESDR------------ARR----- 277 (398)
T ss_pred CCCCchhccCccCCC----CeeeeceEEEEEEeeHHHHHhC-CC---ceEEEEEEEeecC------------CCC-----
Confidence 1012 33 6789999999999986543211 11 11111111 110 000
Q ss_pred chhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHH--
Q 010144 328 TKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVI-- 405 (517)
Q Consensus 328 s~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il-- 405 (517)
+. + .+.+.++++| +.+|+ | +|||++..|..+...-
T Consensus 278 ~~-------------------------~-------~~~~am~~AL-------~~Agl-~---~~IdyI~ahgtgT~~~D~ 314 (398)
T PRK06519 278 AP-------------------------G-------DLEASLERLL-------KPAGG-L---AAPTAVISGATGAHPATA 314 (398)
T ss_pred Ch-------------------------H-------HHHHHHHHHH-------HHCCC-c---ccCCEEEeCCCCCCCccH
Confidence 00 0 0224455566 68888 6 8999999998775543
Q ss_pred ---HHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHH---HHHcCCCCCC-------------CEEEEEEechhHH
Q 010144 406 ---DGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGY---MEAKKRLKKG-------------DRILMISLGAGFK 466 (517)
Q Consensus 406 ---~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~---~~~~g~i~~G-------------d~VlliafG~G~t 466 (517)
+.+.+.++++ + ..+=..+||+.+|+-.+++.. ++++|.+.|. ...+..++|.|-.
T Consensus 315 ~E~~Ai~~~f~~p---v---sS~Ks~~GH~l~AAGa~e~i~~~lal~~g~vpp~~n~~~~~~~~~~~~~~~~~~~~~~~~ 388 (398)
T PRK06519 315 EEKAALEAALAGP---V---RGIGTLFGHTMEAQFPLGLALAALSVSKGALFPPFDASGEKPMSGAAREAVVTTVGHWRG 388 (398)
T ss_pred HHHHHHHHHcCCC---c---cccchhhccchHHHHHHHHHHHHHHHhcCccCCCCCCCcccCccccccEEEEEeeccCCc
Confidence 3455666754 3 245567899999887777753 4556644221 2356777776644
Q ss_pred hheeeeE
Q 010144 467 CNNCVWE 473 (517)
Q Consensus 467 ~~a~vlr 473 (517)
=|.++++
T Consensus 389 ~~~~~~~ 395 (398)
T PRK06519 389 EGMALVE 395 (398)
T ss_pred ceeEEEE
Confidence 4555544
|
|
| >PRK13359 beta-ketoadipyl CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=3.4e-09 Score=112.84 Aligned_cols=95 Identities=17% Similarity=0.200 Sum_probs=84.0
Q ss_pred hHHHHHHHHHHHHHHh-CCCCCCCcCEEEEeecC-CC-CCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHH
Q 010144 160 EMDEIIFDTLDKLFAR-TDISPSEIDVLVVNVSL-FS-PAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQL 236 (517)
Q Consensus 160 ea~~la~~Aa~~aL~~-agi~p~dID~LI~a~s~-~~-~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~l 236 (517)
.+.+|+..|++++|++ +|++|++||.+|++++. .. ..+..+.++....|++.+++++.|++ .|++++.|+.+|.++
T Consensus 25 ~~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~vp~~tV~~-~CaSG~~Av~~A~~~ 103 (400)
T PRK13359 25 RADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHGVPGSTINR-LCGSGMDAVGVAARA 103 (400)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEec-cchhHHHHHHHHHHH
Confidence 3467789999999997 59999999999998653 22 13778889999999997799999997 999999999999999
Q ss_pred HHcCCCCEEEEEEecCCCC
Q 010144 237 FRTYKNKLAIVVSTESMGP 255 (517)
Q Consensus 237 L~ag~~~~aLVVs~E~~s~ 255 (517)
|++|..+.+|+++.|.+|.
T Consensus 104 I~sG~~divlagGvEsmS~ 122 (400)
T PRK13359 104 IKSGEAALMIAGGVESMSR 122 (400)
T ss_pred HHcCCCCEEEEeeeeccCC
Confidence 9999999999999999876
|
|
| >PRK09050 beta-ketoadipyl CoA thiolase; Validated | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.9e-09 Score=113.52 Aligned_cols=94 Identities=16% Similarity=0.162 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCCcCEEEEeecCC-CC-CCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHH
Q 010144 161 MDEIIFDTLDKLFAR-TDISPSEIDVLVVNVSLF-SP-APSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLF 237 (517)
Q Consensus 161 a~~la~~Aa~~aL~~-agi~p~dID~LI~a~s~~-~~-~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL 237 (517)
+.+|+..|++++|++ +|++|++||.+++++... .. .+..+..+...+|++.+++++.+++ +|+++..|+..|.+.+
T Consensus 26 ~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~vP~~tV~~-aCaSG~~Ai~~A~~~I 104 (401)
T PRK09050 26 ADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSVPGTTINR-LCGSGMDAVGTAARAI 104 (401)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCCCceEEEec-ccccHHHHHHHHHHHH
Confidence 467789999999996 799999999999976422 21 3567777999999987799999997 9999999999999999
Q ss_pred HcCCCCEEEEEEecCCCC
Q 010144 238 RTYKNKLAIVVSTESMGP 255 (517)
Q Consensus 238 ~ag~~~~aLVVs~E~~s~ 255 (517)
++|..+.+|+++.|.+|.
T Consensus 105 ~sG~~dvvlagGvEsmS~ 122 (401)
T PRK09050 105 KAGEAELMIAGGVESMSR 122 (401)
T ss_pred HCCCCCEEEEeccccccc
Confidence 999999999999998875
|
|
| >PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=3.1e-09 Score=113.98 Aligned_cols=253 Identities=10% Similarity=0.021 Sum_probs=155.4
Q ss_pred HHHHHHHHHHHHHHhCCCC-CCCcCE----EEEeecCCC------------------C--------CC-cHHHHHHHHcC
Q 010144 161 MDEIIFDTLDKLFARTDIS-PSEIDV----LVVNVSLFS------------------P--------AP-SLTSRIINRYN 208 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~-p~dID~----LI~a~s~~~------------------~--------~P-s~a~~I~~~LG 208 (517)
..+|+..|+++||+++|++ +++++. +++.++... . .+ ..+..|...+|
T Consensus 77 ~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~ 156 (421)
T PTZ00050 77 ATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKHK 156 (421)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHhC
Confidence 4678999999999999998 666542 333321100 0 11 24677889999
Q ss_pred CCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCC---------------C-------CCCCCcccc
Q 010144 209 LRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN---------------W-------YCGREKSMM 266 (517)
Q Consensus 209 l~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~---------------~-------~~~~dr~~l 266 (517)
+++ +++.+.+ +|++++.||..|.++|++|..+.+||.++|..... + ..+-|++.
T Consensus 157 l~G--p~~ti~~-aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~~- 232 (421)
T PTZ00050 157 LKG--PSGSAVT-ACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDR- 232 (421)
T ss_pred CCC--ccccccc-HhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCCC-
Confidence 974 7889997 99999999999999999999999999999973210 0 00111111
Q ss_pred ccccccccceEEEEEeecccccccchhhcc-ceeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhh
Q 010144 267 LSNILFRSGGCSMLLTNNRALKHKAILKLN-CLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQV 345 (517)
Q Consensus 267 v~~~lfGDGAAAvLLs~~~~~~~~~~~~l~-~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~ 345 (517)
...+.||||+|+||++......+ +-.+. .+......+|+.+ +..+ + |. +
T Consensus 233 -~G~~~gEGAaalvLe~~~~A~~~-g~~i~a~i~g~~~~~d~~~---~~~p-------------~-~~--~--------- 282 (421)
T PTZ00050 233 -AGFVMGEGAGILVLEELEHALRR-GAKIYAEIRGYGSSSDAHH---ITAP-------------H-PD--G--------- 282 (421)
T ss_pred -CCEeeccceEEEEEeeHHHHHHC-CCeEEEEEEEEEEcCCCCC---CCCC-------------C-CC--h---------
Confidence 25788999999999986543211 11111 1122222222210 0000 0 00 0
Q ss_pred cccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhh-hCCCCCcccccceeecCCCChHHH-----HHHHhhCCCCc-cc
Q 010144 346 LVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAV-LGAGLNLKAGIEHFCLHPGGRAVI-----DGTGKGLELDE-YD 418 (517)
Q Consensus 346 lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~-~g~~~d~~~did~~~~Hq~~~~il-----~~i~~~Lgl~~-e~ 418 (517)
. ...+.+.+++ ++ +|+.| +|||++.+|..+...- +.+.+.+|-.. +.
T Consensus 283 --------~--------~~~~ai~~Al-------~~~Agi~~---~dId~ie~hgtgt~~~D~~E~~al~~~~~~~~~~~ 336 (421)
T PTZ00050 283 --------R--------GARRCMENAL-------KDGANINI---NDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPK 336 (421)
T ss_pred --------H--------HHHHHHHHHH-------HhccCCCh---hhCCEEECCCccCCCCCHHHHHHHHHHhccccCCC
Confidence 0 0123344555 67 89997 8999999998776333 34455555322 22
Q ss_pred chhhhhcccCcccchhhHHHHHHHHH---HHcCCCC--------------------------CCCEEEEEEechhHHhhe
Q 010144 419 LEPARMALHRFGNTSAGGLWYVLGYM---EAKKRLK--------------------------KGDRILMISLGAGFKCNN 469 (517)
Q Consensus 419 ~~~S~~~l~~~GNtsSASi~~~L~~~---~~~g~i~--------------------------~Gd~VlliafG~G~t~~a 469 (517)
+. --.+=..+||+.+|+-.+.|... ++++.+. +=.+++..+||.|-+-.+
T Consensus 337 ~~-v~s~K~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~nsfgfgG~n~~ 415 (421)
T PTZ00050 337 LY-VSSTKGGLGHLLGAAGAVESIVTILSLYEQIIPPTINLENPDAECDLNLVQGKTAHPLQSIDAVLSTSFGFGGVNTA 415 (421)
T ss_pred ce-EECccccccccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCccccCCcccCcCCCCCEEEEeeecCCCeeEE
Confidence 21 02334578999999887777543 4444321 115678899999998888
Q ss_pred eeeEE
Q 010144 470 CVWEV 474 (517)
Q Consensus 470 ~vlr~ 474 (517)
++++.
T Consensus 416 lvl~~ 420 (421)
T PTZ00050 416 LLFTK 420 (421)
T ss_pred EEEeC
Confidence 88863
|
|
| >PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.4e-09 Score=115.09 Aligned_cols=94 Identities=22% Similarity=0.308 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCC-CCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHc
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSP-APSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~-~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~a 239 (517)
..+|+.+|++++|+++|++|++||.+|++++.... .+.++.+++..+|++..++++.++. +|++++.|+..|..+|++
T Consensus 29 ~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~P~~tV~~-aCaSG~~Ai~~Aa~~I~s 107 (428)
T PRK08963 29 AVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSR-ACATSFQAVANVAESIMA 107 (428)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCCcceeehh-hhHHHHHHHHHHHHHHHC
Confidence 46778999999999999999999999998653222 3556777999999986699999997 999999999999999999
Q ss_pred CCCCEEEEEEecCCCC
Q 010144 240 YKNKLAIVVSTESMGP 255 (517)
Q Consensus 240 g~~~~aLVVs~E~~s~ 255 (517)
|..+.+||++.|.+|.
T Consensus 108 G~~dvvLvgG~Esms~ 123 (428)
T PRK08963 108 GTIDIGIAGGADSSSV 123 (428)
T ss_pred CCCCEEEEecccccCC
Confidence 9999999999998874
|
|
| >TIGR02430 pcaF beta-ketoadipyl CoA thiolase | Back alignment and domain information |
|---|
Probab=99.14 E-value=4.3e-09 Score=112.12 Aligned_cols=94 Identities=15% Similarity=0.180 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCCcCEEEEeecC--CCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHH
Q 010144 161 MDEIIFDTLDKLFAR-TDISPSEIDVLVVNVSL--FSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLF 237 (517)
Q Consensus 161 a~~la~~Aa~~aL~~-agi~p~dID~LI~a~s~--~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL 237 (517)
+.+|+.+|++++|++ +|++|+|||.+++++.. ....+..+..+...+|++.+++++.|++ +|++|+.|+.+|...+
T Consensus 25 ~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~~-~CaSG~~Ai~~a~~~I 103 (400)
T TIGR02430 25 ADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSVPGTTVNR-LCGSGLDAIGMAARAI 103 (400)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEeec-hhhhHHHHHHHHHHHH
Confidence 467789999999996 69999999999997542 2223567778999999987799999997 9999999999999999
Q ss_pred HcCCCCEEEEEEecCCCC
Q 010144 238 RTYKNKLAIVVSTESMGP 255 (517)
Q Consensus 238 ~ag~~~~aLVVs~E~~s~ 255 (517)
++|..+.+|+++.|.+|.
T Consensus 104 ~sG~~d~~la~G~E~ms~ 121 (400)
T TIGR02430 104 KAGEADLLIAGGVESMSR 121 (400)
T ss_pred HCCCCCEEEEeccccccC
Confidence 999999999999999875
|
Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid. |
| >PRK06504 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=7e-09 Score=110.17 Aligned_cols=94 Identities=17% Similarity=0.262 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecC-CCC-CCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHH
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVSL-FSP-APSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s~-~~~-~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ 238 (517)
+.+|+..|++++|+++|++|+|||.+|+++.. ... .+..+..+.-.-|++.+++++.++. +|++|+.|+..|.++++
T Consensus 26 ~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~vP~~tV~~-~CaSG~~Ai~~A~~~I~ 104 (390)
T PRK06504 26 PADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESVPGTSIDR-QCGSSQQALHFAAQAVM 104 (390)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEec-hhhHHHHHHHHHHHHHH
Confidence 46789999999999999999999999997643 111 2445444444448866899999997 99999999999999999
Q ss_pred cCCCCEEEEEEecCCCC
Q 010144 239 TYKNKLAIVVSTESMGP 255 (517)
Q Consensus 239 ag~~~~aLVVs~E~~s~ 255 (517)
+|..+.+|+++.|.+|.
T Consensus 105 sG~~dvvLagGvEsmS~ 121 (390)
T PRK06504 105 SGTMDIVIAAGVESMTR 121 (390)
T ss_pred CCCCCEEEEeeeeecCC
Confidence 99999999999998874
|
|
| >PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.1e-08 Score=107.53 Aligned_cols=318 Identities=9% Similarity=0.006 Sum_probs=183.9
Q ss_pred CCceEEEEEEEEeCCCCCceecHHHHHHHHHhcc-cCChHHHHHHHHHHHHhCCceeE--eccCCCcCCCCCCccHHHhH
Q 010144 82 GQCCYMLAYECYKPCDETRRLDTESCARVVWRNK-KLGLEEYRFLLKNMVSSGIGEET--YGPRNVVEGREESPSLAEAF 158 (517)
Q Consensus 82 ~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~-~~~~~~~~~~~ri~~~sGI~~r~--~~~~~~~~~~~~~~~m~~~~ 158 (517)
.++|.|+|+|+..|-. .+.+++.+.+..-. ...+-.. ......++..+. .+++. .++. .+-.+.+
T Consensus 11 ~~~VvItGig~~sp~g----~~~~~~w~~L~~G~s~i~~~~~----~~~~~~~~~~~~~g~i~~~---~d~~-~~~~~~~ 78 (418)
T PRK07910 11 FPNVVVTGIAMTTALA----TDAETTWKLLLDGQSGIRTLDD----PFVEEFDLPVRIGGHLLEE---FDHQ-LTRVELR 78 (418)
T ss_pred CCCEEEEeeEEECCCC----CCHHHHHHHHHcCCCeeEeCCh----hhhhccCCCcceEEEeccC---cccc-CCHHHHh
Confidence 4789999999999998 79999998774311 0110000 001111222111 11111 0010 0111111
Q ss_pred --hhHHHHHHHHHHHHHHhCCC---CCCCcCEEEEeecCC-----------------C--------CCC-cHHHHHHHHc
Q 010144 159 --SEMDEIIFDTLDKLFARTDI---SPSEIDVLVVNVSLF-----------------S--------PAP-SLTSRIINRY 207 (517)
Q Consensus 159 --~ea~~la~~Aa~~aL~~agi---~p~dID~LI~a~s~~-----------------~--------~~P-s~a~~I~~~L 207 (517)
.....++..|+++||+++|+ +++++++++-++... . ..| ..+..|...+
T Consensus 79 ~~d~~~~~~l~aa~~AledAg~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~ 158 (418)
T PRK07910 79 RMSYLQRMSTVLGRRVWENAGSPEVDTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLER 158 (418)
T ss_pred hccHHHHHHHHHHHHHHHHcCCCCCCcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHh
Confidence 23456889999999999996 455565554332110 0 012 2467788888
Q ss_pred CCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCC----------C-CC-----------CCCccc
Q 010144 208 NLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN----------W-YC-----------GREKSM 265 (517)
Q Consensus 208 Gl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~----------~-~~-----------~~dr~~ 265 (517)
|+++ +++.+.+ +|++++.||..|.++|+.|..+.+||.++|..... . .. +-|+..
T Consensus 159 ~~~G--~~~ti~t-aCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd~~~ 235 (418)
T PRK07910 159 HAKA--GVITPVS-ACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDR 235 (418)
T ss_pred CCCC--Ccccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCcCCC
Confidence 9874 6777787 99999999999999999999999999999974220 0 10 111111
Q ss_pred cccccccccceEEEEEeecccccccchhhcc-ceeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhh
Q 010144 266 MLSNILFRSGGCSMLLTNNRALKHKAILKLN-CLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQ 344 (517)
Q Consensus 266 lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~-~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~ 344 (517)
..+++|+|++++||++......+ +.++. .+......+|+.+. ..+ + |. +
T Consensus 236 --~G~v~gEGaa~vvLe~~~~A~~r-g~~i~a~i~g~~~~~dg~~~---~~~-----------~---~~--~-------- 285 (418)
T PRK07910 236 --DGFVFGEGGALMVIETEEHAKAR-GANILARIMGASITSDGFHM---VAP-----------D---PN--G-------- 285 (418)
T ss_pred --CCEeeeceEEEEEEeeHHHHHhC-CCcEEEEEEEEEEecCCCCC---CCC-----------C---CC--H--------
Confidence 26889999999999986543211 11111 12233333443210 000 0 00 0
Q ss_pred hcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHH-----HHHHHhhCCCCcccc
Q 010144 345 VLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAV-----IDGTGKGLELDEYDL 419 (517)
Q Consensus 345 ~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~i-----l~~i~~~Lgl~~e~~ 419 (517)
. ...+.+++++ +++|+.| +|||++..|..+... .+.+.+.+|-..-.+
T Consensus 286 ---------~--------~~~~a~~~Al-------~~agi~~---~did~ie~hgtgt~~~D~~E~~Al~~~fg~~~~~v 338 (418)
T PRK07910 286 ---------E--------RAGHAMTRAI-------ELAGLTP---GDIDHVNAHATGTSVGDVAEGKAINNALGGHRPAV 338 (418)
T ss_pred ---------H--------HHHHHHHHHH-------HHhCCCH---HHCCEEEcCCcCCCCCCHHHHHHHHHHhCCCCCce
Confidence 0 0112344455 6788886 899999999877543 345566666321112
Q ss_pred hhhhhcccCcccchhhHHHHHHHH---HHHcCCCC------------------------CCCEEEEEEechhHHhheeee
Q 010144 420 EPARMALHRFGNTSAGGLWYVLGY---MEAKKRLK------------------------KGDRILMISLGAGFKCNNCVW 472 (517)
Q Consensus 420 ~~S~~~l~~~GNtsSASi~~~L~~---~~~~g~i~------------------------~Gd~VlliafG~G~t~~a~vl 472 (517)
..+=..+||+.+|+-.+.|.. ++++|.+. +-.+++.-+||.|-+-.++++
T Consensus 339 ---~s~K~~~GH~~~AaG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~l~~~~~~~~~~~~~~al~nsfGfGG~N~slvl 415 (418)
T PRK07910 339 ---YAPKSALGHSVGAVGAVESILTVLALRDGVIPPTLNLENLDPEIDLDVVAGEPRPGNYRYAINNSFGFGGHNVALAF 415 (418)
T ss_pred ---eCccccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCCCCCcCCCccEEEEeeecCCCeeEEEEE
Confidence 234577899999987776543 33343321 124567788999988888887
Q ss_pred EE
Q 010144 473 EV 474 (517)
Q Consensus 473 r~ 474 (517)
+.
T Consensus 416 ~~ 417 (418)
T PRK07910 416 GR 417 (418)
T ss_pred ec
Confidence 63
|
|
| >PRK07801 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=4.6e-09 Score=111.28 Aligned_cols=93 Identities=16% Similarity=0.232 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCC-C-CCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHH
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVSLF-S-PAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~-~-~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ 238 (517)
..+|+.+|++++|+++|++|+|||.+|+++... . ..+..+..+.-..|++..++.+.++. +|++++.|+..|.+.|+
T Consensus 26 ~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~p~~~v~~-acaSg~~Av~~Aa~~I~ 104 (382)
T PRK07801 26 PADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEVPGVTVDR-QCGSSQQAIHFAAQAVM 104 (382)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCCceeeecc-hhhhHHHHHHHHHHHHH
Confidence 457789999999999999999999999875411 1 11223344444577765688899996 99999999999999999
Q ss_pred cCCCCEEEEEEecCCC
Q 010144 239 TYKNKLAIVVSTESMG 254 (517)
Q Consensus 239 ag~~~~aLVVs~E~~s 254 (517)
+|..+.+||++.|.++
T Consensus 105 sG~~d~vLv~G~e~ms 120 (382)
T PRK07801 105 SGTQDLVVAGGVQNMS 120 (382)
T ss_pred CCCCCEEEEcchhhhc
Confidence 9999999999888553
|
|
| >PRK08131 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=6.8e-09 Score=110.67 Aligned_cols=94 Identities=12% Similarity=0.191 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCC-CCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHH
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSP-APSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s-~~~~-~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ 238 (517)
..+|+.+|++++|+++|++|+|||.+++++. +... .+..+.++....|++..++++.+++ +|++|+.|+..|...|+
T Consensus 26 ~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~p~~tV~~-~CaSG~~Ai~~A~~~I~ 104 (401)
T PRK08131 26 PDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVPGQTVNR-LCASGLAAVIDAARAIT 104 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCCceeeeec-hhhhHHHHHHHHHHHHH
Confidence 4678999999999999999999999999764 2222 3556677889999986799999997 99999999999999999
Q ss_pred cCCCCEEEEEEecCCCC
Q 010144 239 TYKNKLAIVVSTESMGP 255 (517)
Q Consensus 239 ag~~~~aLVVs~E~~s~ 255 (517)
+|..+.+|+++.|.+|.
T Consensus 105 sG~~dvvlagG~Esms~ 121 (401)
T PRK08131 105 CGEGDLYLAGGVESMSR 121 (401)
T ss_pred CCCCCEEEEEEecCCCC
Confidence 99999999999998875
|
|
| >PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=99.11 E-value=6.9e-09 Score=110.14 Aligned_cols=94 Identities=16% Similarity=0.233 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCCcCEEEEeecCC-CC-CCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHH
Q 010144 161 MDEIIFDTLDKLFAR-TDISPSEIDVLVVNVSLF-SP-APSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLF 237 (517)
Q Consensus 161 a~~la~~Aa~~aL~~-agi~p~dID~LI~a~s~~-~~-~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL 237 (517)
+.+|+..+++++|++ +|++|+|||.+++++... .. .+..+..+....|++.+++++.+++ +|++++.|+.+|..++
T Consensus 27 ~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~~~p~~~V~~-~caSG~~Ai~~A~~~I 105 (387)
T PRK08947 27 AEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPHSVPAVTVNR-LCGSSMQALHDAARAI 105 (387)
T ss_pred HHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCCCCcceeeec-hhHHHHHHHHHHHHHH
Confidence 467789999999997 699999999999986532 22 2445667888999986799999997 9999999999999999
Q ss_pred HcCCCCEEEEEEecCCCC
Q 010144 238 RTYKNKLAIVVSTESMGP 255 (517)
Q Consensus 238 ~ag~~~~aLVVs~E~~s~ 255 (517)
++|..+.+||++.|.+|.
T Consensus 106 ~sG~~d~vlv~G~E~ms~ 123 (387)
T PRK08947 106 MTGDGDVFLIGGVEHMGH 123 (387)
T ss_pred HCCCCCEEEEcccccccc
Confidence 999999999999998764
|
|
| >PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=99.05 E-value=3.7e-08 Score=105.21 Aligned_cols=312 Identities=8% Similarity=0.091 Sum_probs=176.7
Q ss_pred CceEEEEEEEEeCCCCCceecHHHHHHHHHhcc-cCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCcc--HHHhHh
Q 010144 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNK-KLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPS--LAEAFS 159 (517)
Q Consensus 83 ~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~-~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~--m~~~~~ 159 (517)
++|.|+|+|+..|-. .+.+++.+.+..-. .+.+- .+ +...+...+...... +. ++...+ ......
T Consensus 2 ~rVvITG~G~vsp~G----~~~~~~w~~l~~G~sgi~~~-----~~-~~~~~~~~~~~g~~~-~~-~~~~~~~~~~~~~~ 69 (406)
T PRK07967 2 RRVVITGLGIVSSIG----NNQQEVLASLREGRSGITFS-----PE-FAEMGMRSQVWGNVK-LD-PTGLIDRKVMRFMG 69 (406)
T ss_pred CcEEEEcceEECCCC----CCHHHHHHHHHcCCCceeEC-----Cc-ccccCCCCceEEEcC-CC-hhhcCCHHHhhcCC
Confidence 579999999999998 88888887763210 00000 00 011222222111000 00 000001 111112
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCC-----cCEEEEeecCC------------------C--------CCC-cHHHHHHHHc
Q 010144 160 EMDEIIFDTLDKLFARTDISPSE-----IDVLVVNVSLF------------------S--------PAP-SLTSRIINRY 207 (517)
Q Consensus 160 ea~~la~~Aa~~aL~~agi~p~d-----ID~LI~a~s~~------------------~--------~~P-s~a~~I~~~L 207 (517)
....++..|++++|+++|+++++ +++++-++... . ..| ..+..|...+
T Consensus 70 r~~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~ 149 (406)
T PRK07967 70 DASAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPF 149 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHH
Confidence 34678899999999999987543 43333221100 0 111 2578899999
Q ss_pred CCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCCC---------C------------CCCCcccc
Q 010144 208 NLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNW---------Y------------CGREKSMM 266 (517)
Q Consensus 208 Gl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~~---------~------------~~~dr~~l 266 (517)
|+++ +++.+.. +|++++.||..|.++|+.|..+.+||.++|..+..+ . .+-|++.
T Consensus 150 ~l~G--p~~tvs~-aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r- 225 (406)
T PRK07967 150 KIKG--VNYSISS-ACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEMSCLFDAMGALSTKYNDTPEKASRAYDANR- 225 (406)
T ss_pred CCCC--Ccccccc-HhHHHHHHHHHHHHHHHcCCCCEEEEeeecccChHHHHHHHHhhhhccCCCCCCCcCCcCCcCCC-
Confidence 9975 7788997 999999999999999999999999999998754310 0 0111111
Q ss_pred ccccccccceEEEEEeecccccccchhhccc-eeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhh
Q 010144 267 LSNILFRSGGCSMLLTNNRALKHKAILKLNC-LVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQV 345 (517)
Q Consensus 267 v~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~-i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~ 345 (517)
..++.|+||+++||++......| +-++.. +......+|+.+ +.. |. +
T Consensus 226 -~G~v~gEGaa~lvLe~~~~A~~r-ga~i~a~i~G~g~~~d~~~---~~~----------------p~--~--------- 273 (406)
T PRK07967 226 -DGFVIAGGGGVVVVEELEHALAR-GAKIYAEIVGYGATSDGYD---MVA----------------PS--G--------- 273 (406)
T ss_pred -CceeeeceEEEEEEeeHHHHHhC-CCcEEEEEEEEEECCCCCC---CCC----------------CC--H---------
Confidence 25788999999999975432111 111111 112222223211 110 10 0
Q ss_pred cccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHHH-----HHHhhCCCCcccch
Q 010144 346 LVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVID-----GTGKGLELDEYDLE 420 (517)
Q Consensus 346 lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il~-----~i~~~Lgl~~e~~~ 420 (517)
.. +.+.++++| + +.. .|||++..|..+...-| .+.+.+|-..-.+
T Consensus 274 --------~~--------~~~a~~~Al-------~--~~~----~~Idyi~aHgtGT~~~D~~E~~Ai~~~fg~~~~~v- 323 (406)
T PRK07967 274 --------EG--------AVRCMQMAL-------A--TVD----TPIDYINTHGTSTPVGDVKELGAIREVFGDKSPAI- 323 (406)
T ss_pred --------HH--------HHHHHHHHH-------h--CCC----CCccEEEcCCCCCCCCCHHHHHHHHHHhCCCCCee-
Confidence 01 123344444 2 233 48999999987654433 4555565321112
Q ss_pred hhhhcccCcccchhhHHHHHHHH---HHHcCCCC-------------------------CCCEEEEEEechhHHhheeee
Q 010144 421 PARMALHRFGNTSAGGLWYVLGY---MEAKKRLK-------------------------KGDRILMISLGAGFKCNNCVW 472 (517)
Q Consensus 421 ~S~~~l~~~GNtsSASi~~~L~~---~~~~g~i~-------------------------~Gd~VlliafG~G~t~~a~vl 472 (517)
-.+=..+||+.+|+-.+++.. ++++|.+. +-++++.-+||.|-.-.++++
T Consensus 324 --~s~K~~~GH~~~AaG~~e~i~~~lal~~~~iPpt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sfgfGG~n~~lvl 401 (406)
T PRK07967 324 --SATKSLTGHSLGAAGVQEAIYSLLMMEHGFIAPSANIEELDPQAAGMPIVTETTDNAELTTVMSNSFGFGGTNATLVF 401 (406)
T ss_pred --ECcccccccCccccchHHHHHHHHHHhcCcCCCCCCCCCCCccccCCCccCCCCcCCCCCEEEEecccCCCeeEEEEE
Confidence 234467899998887776532 33333221 125678889999988888888
Q ss_pred EE
Q 010144 473 EV 474 (517)
Q Consensus 473 r~ 474 (517)
+.
T Consensus 402 ~~ 403 (406)
T PRK07967 402 RR 403 (406)
T ss_pred Ee
Confidence 75
|
|
| >TIGR02445 fadA fatty oxidation complex, beta subunit FadA | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.4e-08 Score=107.71 Aligned_cols=95 Identities=16% Similarity=0.216 Sum_probs=79.7
Q ss_pred hHHHHHHHHHHHHHHh-CCCCCCCcCEEEEeecCC-CC-CCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHH
Q 010144 160 EMDEIIFDTLDKLFAR-TDISPSEIDVLVVNVSLF-SP-APSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQL 236 (517)
Q Consensus 160 ea~~la~~Aa~~aL~~-agi~p~dID~LI~a~s~~-~~-~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~l 236 (517)
.+.+|+.+|++++|++ +|++|++||.+++++... .. .+..+..+....|++..++++.++. +|++++.|+.+|.+.
T Consensus 24 ~~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~p~~tV~~-~CaSG~~Ai~~Aa~~ 102 (385)
T TIGR02445 24 RAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTSAAVTVNR-LCGSSMQALHDAARA 102 (385)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCcchhhhhh-hhHHHHHHHHHHHHH
Confidence 3467899999999997 599999999999986532 11 2345666666889987799999997 999999999999999
Q ss_pred HHcCCCCEEEEEEecCCCC
Q 010144 237 FRTYKNKLAIVVSTESMGP 255 (517)
Q Consensus 237 L~ag~~~~aLVVs~E~~s~ 255 (517)
+++|..+.+|+++.|.+|.
T Consensus 103 I~sG~~d~vlagG~E~ms~ 121 (385)
T TIGR02445 103 IMTGDADVCLVGGVEHMGH 121 (385)
T ss_pred HHCCCCCEEEEeeehhccc
Confidence 9999999999999998763
|
This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli. |
| >TIGR02446 FadI fatty oxidation complex, beta subunit FadI | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.2e-08 Score=109.57 Aligned_cols=94 Identities=18% Similarity=0.272 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecC-CCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHc
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVSL-FSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s~-~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~a 239 (517)
+.+|+.+|++++|+++|++|++||.+|+++.. ....+.++..+.-..|++..++.+.+++ +|++++.|+.+|..++++
T Consensus 31 ~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~~~~p~~~V~~-~CaSG~~A~~~a~~~I~s 109 (430)
T TIGR02446 31 AVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVTR-ACATSFQSAVNVAESIMA 109 (430)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCCCCCCchhhhhh-hhhHHHHHHHHHHHHHHC
Confidence 46778999999999999999999999997642 2222445666666689987799999996 999999999999999999
Q ss_pred CCCCEEEEEEecCCCC
Q 010144 240 YKNKLAIVVSTESMGP 255 (517)
Q Consensus 240 g~~~~aLVVs~E~~s~ 255 (517)
|..+.+|+++.|.+|.
T Consensus 110 G~~dvvla~G~E~mS~ 125 (430)
T TIGR02446 110 GAIDIGIAGGADSSSV 125 (430)
T ss_pred CCCCEEEEeeeEcccC
Confidence 9999999999999874
|
This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli. |
| >PRK08257 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.01 E-value=4.9e-08 Score=106.82 Aligned_cols=91 Identities=12% Similarity=0.045 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHHHHhCCCC--CCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHH
Q 010144 161 MDEIIFDTLDKLFARTDIS--PSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~--p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ 238 (517)
..+|+.+|+++||+++|++ ++|||.+++..............++++||+.+ ........ ||+++..++..|...|+
T Consensus 27 ~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~~~~~~~~la~~lGl~p-~~~~~~~~-GG~s~~~~v~~Aa~~Ia 104 (498)
T PRK08257 27 PVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWRYRDPPGLLAERLGADP-ARTVYSPV-GGNSPQRLVNEAALRIA 104 (498)
T ss_pred HHHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccccccCHHHHHHHHcCCCC-cceeEecC-CCHHHHHHHHHHHHHHH
Confidence 4577999999999999999 99999998753211122234578999999974 45555554 89999999999999999
Q ss_pred cCCCCEEEEEEecCC
Q 010144 239 TYKNKLAIVVSTESM 253 (517)
Q Consensus 239 ag~~~~aLVVs~E~~ 253 (517)
+|..+.|||+++|..
T Consensus 105 sG~advVLv~G~E~~ 119 (498)
T PRK08257 105 AGEADVALVAGAEAQ 119 (498)
T ss_pred CCCCCEEEEeeeeec
Confidence 999999999999974
|
|
| >PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=2.6e-08 Score=104.00 Aligned_cols=252 Identities=9% Similarity=0.004 Sum_probs=153.7
Q ss_pred HHHHHHHHHHHHHHhCCC--CCCCcCEEEEeecCC-----------------CCCC---------cHHHHHHHHcCCCCC
Q 010144 161 MDEIIFDTLDKLFARTDI--SPSEIDVLVVNVSLF-----------------SPAP---------SLTSRIINRYNLRND 212 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi--~p~dID~LI~a~s~~-----------------~~~P---------s~a~~I~~~LGl~~~ 212 (517)
..+++..|++++++++|+ +++++++++-++... ...| ..+.+|...+|+++
T Consensus 4 ~~~~~~~a~~~a~~~a~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l~G- 82 (342)
T PRK14691 4 WWRYKWITFHPSLTHADNTEKQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFKG- 82 (342)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccEEEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCCCC-
Confidence 346688999999999995 667777666432100 0011 35788999999975
Q ss_pred eeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCCC----------C------------CCCCcccccccc
Q 010144 213 IKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNW----------Y------------CGREKSMMLSNI 270 (517)
Q Consensus 213 ~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~~----------~------------~~~dr~~lv~~~ 270 (517)
+++.+.+ +|++++.||..|.++|+.|..+.+||.++|.....+ . .+-|++. ..+
T Consensus 83 -p~~ti~~-aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r--~G~ 158 (342)
T PRK14691 83 -PIGAPVT-ACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTAR--DGF 158 (342)
T ss_pred -Ccccccc-HhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCC--CCc
Confidence 8888887 999999999999999999999999999998742210 0 0112111 267
Q ss_pred ccccceEEEEEeecccccccchhhc-cceeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhcccc
Q 010144 271 LFRSGGCSMLLTNNRALKHKAILKL-NCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPK 349 (517)
Q Consensus 271 lfGDGAAAvLLs~~~~~~~~~~~~l-~~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl 349 (517)
++||||+++||+.......+ +.++ ..+......+|+... ..+ . |. +
T Consensus 159 v~gEGAa~lvLes~~~A~~r-G~~i~a~I~g~~~~~d~~~~---~~p-----------~---p~--~------------- 205 (342)
T PRK14691 159 VMGEGAGLLIIEELEHALAR-GAKPLAEIVGYGTSADAYHM---TSG-----------A---ED--G------------- 205 (342)
T ss_pred cccceEEEEEEeeHHHHHhC-CCCceEEEEEEEEEcCCCCC---CCC-----------C---CC--H-------------
Confidence 89999999999976543211 1111 112222222232110 000 0 00 0
Q ss_pred cCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHHH-----HHHhhCCCCcccchhhhh
Q 010144 350 ILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVID-----GTGKGLELDEYDLEPARM 424 (517)
Q Consensus 350 ~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il~-----~i~~~Lgl~~e~~~~S~~ 424 (517)
. ...+.+++++ +++|+.| +|||++..|-.+...-| .+.+.+|-. ..+. --.
T Consensus 206 ----~--------~~~~ai~~AL-------~~Agl~p---~dIdyIeaHgtgT~~~D~~E~~Ai~~~fg~~-~~~~-v~s 261 (342)
T PRK14691 206 ----D--------GAYRAMKIAL-------RQAGITP---EQVQHLNAHATSTPVGDLGEINAIKHLFGES-NALA-ITS 261 (342)
T ss_pred ----H--------HHHHHHHHHH-------HHcCCCH---HHCCEEEecCCCCcCCCHHHHHHHHHHhCCC-CCce-EEC
Confidence 0 0123344555 6889986 99999999987655433 345556532 1221 023
Q ss_pred cccCcccchhhHHHHHHHH---HHHcCCCC-------------------------CCCEEEEEEechhHHhheeeeEE
Q 010144 425 ALHRFGNTSAGGLWYVLGY---MEAKKRLK-------------------------KGDRILMISLGAGFKCNNCVWEV 474 (517)
Q Consensus 425 ~l~~~GNtsSASi~~~L~~---~~~~g~i~-------------------------~Gd~VlliafG~G~t~~a~vlr~ 474 (517)
+=..+||+.+|+-.+++.. .+++|.+. +-+.++.-+||.|-...+++++.
T Consensus 262 ~K~~~GH~~~AaG~~~~~~~~l~l~~~~ippt~n~~~~d~~~~~~~~v~~~~~~~~~~~al~nsfgfGG~n~~lvl~~ 339 (342)
T PRK14691 262 TKSATGHLLGAAGGLETIFTVLALRDQIVPATLNLENPDPAAKGLNIIAGNAQPHDMTYALSNGFGFAGVNASILLKR 339 (342)
T ss_pred CcccccCCcchhhHHHHHHHHHHHhCCccCCcCCCCCCCccccccCcccCCCccCCCCEEEEeCccCCCeeEEEEEee
Confidence 3467899876664444332 23333211 12467888999999988988875
|
|
| >PRK08170 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=3.6e-09 Score=113.66 Aligned_cols=94 Identities=13% Similarity=0.268 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHc
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~a 239 (517)
..+|+.+|+++||+++|++++|||.||+++. +....+..+..++..+|++.++++++++. +|++++.|+.+|..+|++
T Consensus 27 ~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v~~-~CaSg~~al~~A~~~I~s 105 (426)
T PRK08170 27 ASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKVPAWTVQR-NCASGMQALDSAAANIAL 105 (426)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCceeeeccc-hhhHHHHHHHHHHHHHHC
Confidence 4677899999999999999999999998753 33334677888999999975789999997 999999999999999999
Q ss_pred CCCCEEEEEEecCCCC
Q 010144 240 YKNKLAIVVSTESMGP 255 (517)
Q Consensus 240 g~~~~aLVVs~E~~s~ 255 (517)
|..+++||+++|.+|.
T Consensus 106 G~~d~vLv~G~E~ms~ 121 (426)
T PRK08170 106 GRADLVLAGGVEAMSH 121 (426)
T ss_pred CCCCEEEEEEEecccC
Confidence 9999999999998775
|
|
| >cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=98.89 E-value=7.1e-09 Score=110.28 Aligned_cols=93 Identities=11% Similarity=0.135 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHH-HHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHH
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPAPSLTSR-IINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s-~~~~~Ps~a~~-I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ 238 (517)
+.+|+..|++++|+++|++|+|||.||++++ ++...+..+.. +++.+|+. ++++++|++ +|++++.|+.+|..+|+
T Consensus 23 ~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~~-~~p~~~V~~-~Casg~~al~~A~~~I~ 100 (393)
T cd00826 23 AHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQ-EAPAIGMNN-LCGSGLRALALAMQLIA 100 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCCC-CCcEEEecc-hhHHHHHHHHHHHHHHH
Confidence 4677899999999999999999999999764 44434555553 67888886 799999997 99999999999999999
Q ss_pred cCCCCEEEEEEecCCCC
Q 010144 239 TYKNKLAIVVSTESMGP 255 (517)
Q Consensus 239 ag~~~~aLVVs~E~~s~ 255 (517)
+|..+.+||+++|.+|.
T Consensus 101 sG~~~~vlv~g~e~~s~ 117 (393)
T cd00826 101 GGDANCILAGGFEKMET 117 (393)
T ss_pred CCCCCEEEEEeeecccc
Confidence 99999999999999875
|
There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.3e-08 Score=102.61 Aligned_cols=95 Identities=16% Similarity=0.282 Sum_probs=82.5
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHH
Q 010144 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (517)
Q Consensus 160 ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ 238 (517)
.+.+|+..|++++|++++++|++||.|++++. +....+..+..+.-..|++.+++++.|++ .|++++.|+..|...|+
T Consensus 25 ~~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~~vp~~~V~~-~CaSG~~Av~~a~~~I~ 103 (264)
T PF00108_consen 25 SPEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGLPESVPATTVNR-ACASGLQAVHLAAMAIA 103 (264)
T ss_dssp -HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-TTSEEEEEE--GGGHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhcccccccceeeehh-hhhHHHHHHHHhhhhhc
Confidence 35678999999999999999999999999864 43446778888888999988899999997 99999999999999999
Q ss_pred cCCCCEEEEEEecCCCC
Q 010144 239 TYKNKLAIVVSTESMGP 255 (517)
Q Consensus 239 ag~~~~aLVVs~E~~s~ 255 (517)
+|..+.+|+++.|.+|.
T Consensus 104 sG~~dvvlagGvE~mS~ 120 (264)
T PF00108_consen 104 SGEADVVLAGGVESMSR 120 (264)
T ss_dssp TTS-SEEEEEEEEETTT
T ss_pred CCCccEEEEeccccccc
Confidence 99999999999999997
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B .... |
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=98.84 E-value=3.4e-07 Score=115.53 Aligned_cols=216 Identities=14% Similarity=0.100 Sum_probs=135.1
Q ss_pred HHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCC----------CCC------CCC
Q 010144 199 LTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN----------WYC------GRE 262 (517)
Q Consensus 199 ~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~----------~~~------~~d 262 (517)
++.+|.++||+++ +++.|.. +|+|++.||++|.+.|++|..+.+|+.+++..... ... +-|
T Consensus 185 ~A~RIS~~f~L~G--ps~tVdt-ACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~p~~~~~fs~~~~lS~~g~crpFD 261 (2582)
T TIGR02813 185 ISGRIANRFDLGG--MNCVVDA-ACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFMYMSFSKTPAFTTNEDIQPFD 261 (2582)
T ss_pred HHHHHHHHhCCCC--Ccccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCCHHHHHHHHhccCcCCCCCccCCC
Confidence 4789999999985 8899997 99999999999999999999999999888763220 000 112
Q ss_pred ccccccccccccceEEEEEeecccccccchhhccce-eeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhh
Q 010144 263 KSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCL-VRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTM 341 (517)
Q Consensus 263 r~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i-~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~ 341 (517)
.+. ..++.|+|++++||.+-.+..+ .+=++..+ ..+...+||+. ..++.| ...
T Consensus 262 ~~a--dG~v~GEGag~vvLkrL~dA~~-dGd~IyAvI~G~g~~~DG~~-~~itaP----------------~~~------ 315 (2582)
T TIGR02813 262 IDS--KGMMIGEGIGMMALKRLEDAER-DGDRIYAVIKGVGASSDGKF-KSIYAP----------------RPE------ 315 (2582)
T ss_pred CCC--CcccccceEEEEEeCcHHHHHh-CCCcEEEEEEEEEEcCCCCC-CCCcCC----------------CHH------
Confidence 111 2678999999999997543211 11112122 22222333321 111111 000
Q ss_pred hhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHH-----HHHHHhhCCCCc
Q 010144 342 NLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAV-----IDGTGKGLELDE 416 (517)
Q Consensus 342 ~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~i-----l~~i~~~Lgl~~ 416 (517)
. ..+.+++++ +.+|+.| +||+++-.|-.|..+ +..+.+.++-..
T Consensus 316 -------------g--------q~~~i~~Al-------~~Agi~p---~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~ 364 (2582)
T TIGR02813 316 -------------G--------QAKALKRAY-------DDAGFAP---HTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDN 364 (2582)
T ss_pred -------------H--------HHHHHHHHH-------HHcCCCH---HHCCEEEecCCCCCCCCHHHHHHHHHHhcccc
Confidence 1 113344555 6889997 899999999876544 344556665432
Q ss_pred ---ccchhhhhcccCcccchhhHHHHHHHH---HHHcCCCC--------------------------------CC--CEE
Q 010144 417 ---YDLEPARMALHRFGNTSAGGLWYVLGY---MEAKKRLK--------------------------------KG--DRI 456 (517)
Q Consensus 417 ---e~~~~S~~~l~~~GNtsSASi~~~L~~---~~~~g~i~--------------------------------~G--d~V 456 (517)
..+. --.+=..+||+-+|+=...|.. +++.|.+. .| .++
T Consensus 365 ~~~~~~~-vgSvKs~iGH~~~AAG~a~lik~~lal~~~~iPp~~~~~~pnp~~~~~~~~~~v~~~~~pw~~~~~~~~r~a 443 (2582)
T TIGR02813 365 DQKQHIA-LGSVKSQIGHTKSTAGTAGMIKAVLALHHKVLPPTINVDQPNPKLDIENSPFYLNTETRPWMQREDGTPRRA 443 (2582)
T ss_pred cCCCCce-eeccccccccchHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccceeecCCcccCcccCCCCccEE
Confidence 1121 0223467899999988877754 23333221 11 467
Q ss_pred EEEEechhHHhheeeeEEe
Q 010144 457 LMISLGAGFKCNNCVWEVM 475 (517)
Q Consensus 457 lliafG~G~t~~a~vlr~~ 475 (517)
.+-+||.|.+-.+++++-.
T Consensus 444 ~vnsfGfGGtN~hvvlee~ 462 (2582)
T TIGR02813 444 GISSFGFGGTNFHMVLEEY 462 (2582)
T ss_pred EEeCccCCCeeEEEEEeec
Confidence 7889999999999998864
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PRK08142 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=3.7e-07 Score=97.05 Aligned_cols=87 Identities=11% Similarity=0.077 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCC
Q 010144 162 DEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYK 241 (517)
Q Consensus 162 ~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~ 241 (517)
.+|+.+|+++||+++|++++|||.++..+.. .+.....+++.||++ ..+...+.. ||+++..++..|...|++|.
T Consensus 26 ~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~---~~~~~~~~~~~lGl~-~~~~~~v~~-gg~s~~~a~~~A~~~I~sG~ 100 (388)
T PRK08142 26 AQLHAEVAKGALADAGLSLADVDGYFCAGDA---PGLGPASMVDYLGLK-LRHVDSTET-GGSSYLAHVGHAAQAIAAGK 100 (388)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEcCCC---CCccHHHHHHhCCCC-CeeeccccC-CcHHHHHHHHHHHHHHHcCC
Confidence 5778999999999999999999997653211 111124589999997 578888886 99999999999999999999
Q ss_pred CCEEEEEEecCC
Q 010144 242 NKLAIVVSTESM 253 (517)
Q Consensus 242 ~~~aLVVs~E~~ 253 (517)
.+.||||+.|..
T Consensus 101 ~d~vLvvg~e~~ 112 (388)
T PRK08142 101 CSVALITLAGRP 112 (388)
T ss_pred CCEEEEEeeeec
Confidence 999999998864
|
|
| >PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=98.72 E-value=5.3e-08 Score=96.52 Aligned_cols=121 Identities=17% Similarity=0.336 Sum_probs=83.9
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCC------cCEEEEeecCC-----------C------C------CC-cHHHHHHHHcC
Q 010144 159 SEMDEIIFDTLDKLFARTDISPSE------IDVLVVNVSLF-----------S------P------AP-SLTSRIINRYN 208 (517)
Q Consensus 159 ~ea~~la~~Aa~~aL~~agi~p~d------ID~LI~a~s~~-----------~------~------~P-s~a~~I~~~LG 208 (517)
.....|+..|+.+||+++|+++++ +++++-++..+ . + .| ..+.+|+..+|
T Consensus 85 ~~~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~g 164 (254)
T PF00109_consen 85 DRQSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFG 164 (254)
T ss_dssp -HHHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHT
T ss_pred hhhhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcC
Confidence 345789999999999999998853 33333222121 0 1 22 25789999999
Q ss_pred CCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecC-CCCC---------CCCCC------Ccccccccccc
Q 010144 209 LRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTES-MGPN---------WYCGR------EKSMMLSNILF 272 (517)
Q Consensus 209 l~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~-~s~~---------~~~~~------dr~~lv~~~lf 272 (517)
+++ +++.+.+ +|++++.||..|.++|++|..+.+||.++|. .+.. ..... |+.. ...++
T Consensus 165 l~G--~~~tv~~-acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s~~~~~~pf~~~~--~G~v~ 239 (254)
T PF00109_consen 165 LRG--PSYTVST-ACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALSADGPCRPFDPFA--DGFVL 239 (254)
T ss_dssp B-S--SEEEEE--GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-TTSGGGSTBTTB---SB-B
T ss_pred CCC--ccccccc-cccccccccchhccccccccccccccccccccccccccccccccccccccccccccCCCC--CCEEE
Confidence 975 6788887 9999999999999999999999999999994 4431 11111 1111 36899
Q ss_pred ccceEEEEEeec
Q 010144 273 RSGGCSMLLTNN 284 (517)
Q Consensus 273 GDGAAAvLLs~~ 284 (517)
|+||+++||+..
T Consensus 240 gEGa~~~vLe~~ 251 (254)
T PF00109_consen 240 GEGAGALVLERL 251 (254)
T ss_dssp B-EEEEEEEEEH
T ss_pred ECceEEEEEEEh
Confidence 999999999874
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B .... |
| >PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long | Back alignment and domain information |
|---|
Probab=98.68 E-value=2e-06 Score=86.82 Aligned_cols=240 Identities=13% Similarity=0.116 Sum_probs=126.3
Q ss_pred hHhhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHH
Q 010144 157 AFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQL 236 (517)
Q Consensus 157 ~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~l 236 (517)
+++.-..|..+|++.+|++++++++|||.++-.--....+ .++..++.|++ +-+.+-+ +||.+..+|.+|..+
T Consensus 47 wEkAE~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~i--~s~f~ar~l~i----Pf~Glyg-ACST~~e~l~laa~~ 119 (329)
T PF07451_consen 47 WEKAESKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQII--SSSFAARDLGI----PFLGLYG-ACSTMMESLALAAML 119 (329)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT--GGG-SEEEEEETTCCCC--HHHHHHHHHT------EEEB---CCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhhH--HHHHHHHhcCC----Cccchhh-HHHHHHHHHHHHHHH
Confidence 3344467889999999999999999999988764333333 34788888876 6899998 999999999999999
Q ss_pred HHcCCCCEEEEEEecCCCC---CCCC----CCCccccccccccccceEEEEEeecccccccchhhccceeeeeeccCccc
Q 010144 237 FRTYKNKLAIVVSTESMGP---NWYC----GREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEA 309 (517)
Q Consensus 237 L~ag~~~~aLVVs~E~~s~---~~~~----~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~ 309 (517)
+.+|-.+++|+.++-.... .|.. +..|.. +...--=||+|+||++..... ++ ...|-|+.
T Consensus 120 vdgg~a~~vla~tSSH~~tAERQfR~P~EyG~Qrp~--tAqwTVTGaGa~il~~~~~~p-----~I------t~~T~GkV 186 (329)
T PF07451_consen 120 VDGGFADYVLAATSSHFATAERQFRFPTEYGGQRPP--TAQWTVTGAGAAILSKEGSGP-----RI------THATIGKV 186 (329)
T ss_dssp HHTTS-SEEEEEEEE-CCHHHHHT---GGGT----T--T--EE--EEEEEEEESS--SE-----EE------EEEE----
T ss_pred HhCCCcceEEEEeccccchhhhhccCchhccCCCCC--cccEEEeceEEEEEecCCCCc-----EE------EEEEEEEE
Confidence 9999999999987665432 1211 112211 233445799999999876542 11 11122322
Q ss_pred ccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcc
Q 010144 310 YECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLK 389 (517)
Q Consensus 310 ~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~ 389 (517)
.+ .|+ +|..++... .. .....++.+.+ +..|..|
T Consensus 187 vD-----------~G~---~D~~nMGaA------------------MA----PAA~dTI~~h~-------~D~g~~p--- 220 (329)
T PF07451_consen 187 VD-----------MGI---KDPNNMGAA------------------MA----PAAADTIEQHF-------KDTGRSP--- 220 (329)
T ss_dssp B------------SS------TT-HHHH------------------HH----HHHHHHHHHHH-------HHCT--G---
T ss_pred EE-----------cCC---CCcccchhh------------------Hh----HHHHHHHHHHH-------HHhCCCh---
Confidence 11 011 111111110 00 11123333333 5677886
Q ss_pred cccceeecCC---CChHHHHHHHhhCCCCcccchh--hhhcccCc---------ccchhhHHHHH-HHHHHHcCCCCCCC
Q 010144 390 AGIEHFCLHP---GGRAVIDGTGKGLELDEYDLEP--ARMALHRF---------GNTSAGGLWYV-LGYMEAKKRLKKGD 454 (517)
Q Consensus 390 ~did~~~~Hq---~~~~il~~i~~~Lgl~~e~~~~--S~~~l~~~---------GNtsSASi~~~-L~~~~~~g~i~~Gd 454 (517)
+|.|.++.-- .++.++.++.++-|++.++... ..+..+.- |--.||.+.+. |-..+++|++ .
T Consensus 221 ~dYDlIvTGDLg~vG~~il~~Ll~~~G~~i~~~~~DCG~~iyd~~~Qdv~aGGSGcgCSA~V~~g~ll~~l~~g~~---k 297 (329)
T PF07451_consen 221 DDYDLIVTGDLGKVGRKILRDLLKEKGYDISENYNDCGLMIYDPEKQDVHAGGSGCGCSAVVLCGYLLPKLRKGEL---K 297 (329)
T ss_dssp GG-SEEEESS-HHHHHHHHHHHHHHTT---GGGEEEHHHCSS-TT-S--TT-EESHHHHHHHHHHCHHHHHHTTS----S
T ss_pred hhcCeEEecchHHHHHHHHHHHHHHcCCCCccccccCCeEeecCCccccccCCCCcchHHHHHHHHHHHHHHcCCc---e
Confidence 8999999854 5788999999988887665210 00111111 22234444443 2233445655 4
Q ss_pred EEEEEEechhH
Q 010144 455 RILMISLGAGF 465 (517)
Q Consensus 455 ~VlliafG~G~ 465 (517)
||++++.|+=+
T Consensus 298 rvL~vaTGALl 308 (329)
T PF07451_consen 298 RVLFVATGALL 308 (329)
T ss_dssp EEEEEEEEE--
T ss_pred EEEEEEchhhc
Confidence 89999999743
|
This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A. |
| >PRK06066 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=4.1e-06 Score=88.98 Aligned_cols=87 Identities=8% Similarity=0.124 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHHhCC-CCC-CCcCEEEEeecCCC-CCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHH
Q 010144 162 DEIIFDTLDKLFARTD-ISP-SEIDVLVVNVSLFS-PAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (517)
Q Consensus 162 ~~la~~Aa~~aL~~ag-i~p-~dID~LI~a~s~~~-~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ 238 (517)
.+|+.+|+++||+++| +++ +|||.+++++.... ........++..+|+. ..+.+.+ |+++..++..|...++
T Consensus 26 ~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~~-~~~~~~v----~~sg~~a~~~A~~aV~ 100 (385)
T PRK06066 26 REMMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGGA-MRPTMTV----AGDGLQGLAHAVMHIN 100 (385)
T ss_pred HHHHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHcccC-CCCeEEE----eCcHHHHHHHHHHHHH
Confidence 5779999999999999 997 79999987542111 1112234577889985 2344444 7889999999999999
Q ss_pred cCCCCEEEEEEecCC
Q 010144 239 TYKNKLAIVVSTESM 253 (517)
Q Consensus 239 ag~~~~aLVVs~E~~ 253 (517)
+|..++|||++.|+.
T Consensus 101 sG~~d~vLv~g~~~~ 115 (385)
T PRK06066 101 SGLANVVVVEAHSKP 115 (385)
T ss_pred cCCCCEEEEEEEeec
Confidence 999999999999864
|
|
| >PRK06366 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.6e-07 Score=99.89 Aligned_cols=94 Identities=10% Similarity=0.170 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecC-CCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHc
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVSL-FSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s~-~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~a 239 (517)
+.+|+.+|++++|+++|++|+|||.+|+++.. ....+..+..++..+|++.+++.+.+++ +|++++.|+..|...|++
T Consensus 26 ~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v~~-~caSg~~av~~Aa~~I~s 104 (388)
T PRK06366 26 APQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTKYTVNV-VCASGMLAVESAAREIML 104 (388)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCcceeeec-hhhHHHHHHHHHHHHHhc
Confidence 46779999999999999999999999987542 1112345677899999975689999996 999999999999999999
Q ss_pred CCCCEEEEEEecCCCC
Q 010144 240 YKNKLAIVVSTESMGP 255 (517)
Q Consensus 240 g~~~~aLVVs~E~~s~ 255 (517)
|..+.+|+++.|.++.
T Consensus 105 G~~d~vla~G~e~ms~ 120 (388)
T PRK06366 105 GERDLVIAGGMENMSN 120 (388)
T ss_pred CCCCEEEEEeeEcccc
Confidence 9999999988898774
|
|
| >PRK06157 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=98.56 E-value=3.2e-07 Score=97.88 Aligned_cols=93 Identities=12% Similarity=0.164 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCC-CCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHc
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVSLF-SPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~-~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~a 239 (517)
..+|+.+|++++|+++|++++|||.+++++... +........+.+.+|++ ..+++.+.+ +|++++.|+..|...|++
T Consensus 27 ~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~-~~~~~~v~~-~c~sg~~ai~~A~~~I~s 104 (398)
T PRK06157 27 AEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLP-NIPVTRVEN-FCATGSEAFRGAVYAVAS 104 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCC-CCCEEEEec-ccHHHHHHHHHHHHHHHC
Confidence 357799999999999999999999999875321 21122236688899997 588999996 999999999999999999
Q ss_pred CCCCEEEEEEecCCCC
Q 010144 240 YKNKLAIVVSTESMGP 255 (517)
Q Consensus 240 g~~~~aLVVs~E~~s~ 255 (517)
|..+.+||++.|.++.
T Consensus 105 G~~d~vlv~G~e~~s~ 120 (398)
T PRK06157 105 GAYDIALALGVEKLKD 120 (398)
T ss_pred CCCCEEEEEEEeeccc
Confidence 9999999999998754
|
|
| >PTZ00455 3-ketoacyl-CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=4.9e-07 Score=97.52 Aligned_cols=94 Identities=19% Similarity=0.286 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCC--cCEEEEeecC---CCCCCcHHHHHHHHcCCC------CCeeEEEecCCcchHHHHH
Q 010144 161 MDEIIFDTLDKLFARTDISPSE--IDVLVVNVSL---FSPAPSLTSRIINRYNLR------NDIKAFNLSGMGCSASVVA 229 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~d--ID~LI~a~s~---~~~~Ps~a~~I~~~LGl~------~~~~~~dl~~mgCsggl~A 229 (517)
..+|+.+|++++|+++|++|+| ||.+|+++.. ....+..+..+...+|++ ..++++.++. +|++++.|
T Consensus 48 ~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p~~~V~~-~caSG~~A 126 (438)
T PTZ00455 48 LEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKPAMRVEG-ACASGGLA 126 (438)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccCcccccccCCCceeEEEC-cCHHHHHH
Confidence 4677999999999999999999 9999987532 112355566777665554 3689999997 99999999
Q ss_pred HHHHHHHHHcCCCCEEEEEEecCCCC
Q 010144 230 VDLVQQLFRTYKNKLAIVVSTESMGP 255 (517)
Q Consensus 230 L~lA~~lL~ag~~~~aLVVs~E~~s~ 255 (517)
+..|...|++|..+.+||+++|.++.
T Consensus 127 i~~A~~~I~sG~~dvvlv~G~E~ms~ 152 (438)
T PTZ00455 127 VQSAWEALLAGTSDIALVVGVEVQTT 152 (438)
T ss_pred HHHHHHHHHCCCCCEEEEEEEeeccc
Confidence 99999999999999999999998875
|
|
| >PRK06365 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=5.1e-07 Score=97.22 Aligned_cols=91 Identities=14% Similarity=0.082 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCC-CCCCcHH-HHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHc
Q 010144 162 DEIIFDTLDKLFARTDISPSEIDVLVVNVSLF-SPAPSLT-SRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (517)
Q Consensus 162 ~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~-~~~Ps~a-~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~a 239 (517)
.+|+.+|+++||+++|++++|||.+++++..+ ...+..+ ..++..+|++ ..+++.+.. +|+++..|+..|...|++
T Consensus 38 ~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~-~~~~~~v~~-~~aSg~~ai~~A~~~I~s 115 (430)
T PRK06365 38 RERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLV-PKPSKRIEG-GGATGGLAFQAGYEEIAS 115 (430)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCC-CCceEEEeC-CcHHHHHHHHHHHHHHHc
Confidence 57899999999999999999999988765322 1122333 3467999998 489999996 999999999999999999
Q ss_pred CCCCEEEEEEecCCC
Q 010144 240 YKNKLAIVVSTESMG 254 (517)
Q Consensus 240 g~~~~aLVVs~E~~s 254 (517)
|..+.|||+++|..+
T Consensus 116 G~~~~vLv~G~e~~s 130 (430)
T PRK06365 116 GRMDCVAVYGFETMS 130 (430)
T ss_pred CCCCEEEEEEeeecc
Confidence 999999999999754
|
|
| >PRK07937 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=98.43 E-value=3.2e-05 Score=81.29 Aligned_cols=88 Identities=16% Similarity=0.040 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCC--cHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHc
Q 010144 162 DEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAP--SLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (517)
Q Consensus 162 ~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~P--s~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~a 239 (517)
.+|+.+|+++||+++|++++|||.++.+++ +.... .....+...+|+.+..+...+.+ ++..|+..|...+++
T Consensus 25 ~el~~eA~~~Al~DAgl~~~dID~~~~~~~-~~~~~~~~~~~~~~~~~G~~~~~~~~~v~~----~g~~a~~~A~~aI~s 99 (352)
T PRK07937 25 VEMLMPCFAELYAELGITKSDIGFWCSGSS-DYLAGRAFSFISAIDSIGAVPPINESHVEM----DAAWALYEAWVKLLT 99 (352)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEcc-ccccccccchhhHHhhccCCCCCceEEecC----cHHHHHHHHHHHHhc
Confidence 467899999999999999999998854432 22111 11234567788853444555553 577799999999999
Q ss_pred CCCCEEEEEEecCCC
Q 010144 240 YKNKLAIVVSTESMG 254 (517)
Q Consensus 240 g~~~~aLVVs~E~~s 254 (517)
|..+.|||++.|+.+
T Consensus 100 G~~d~VLv~g~~k~~ 114 (352)
T PRK07937 100 GEVDTALVYGFGKSS 114 (352)
T ss_pred CCCCEEEEEEecccC
Confidence 999999999999653
|
|
| >COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.39 E-value=3e-05 Score=82.82 Aligned_cols=122 Identities=13% Similarity=0.233 Sum_probs=88.8
Q ss_pred hhHHHHHHHHHHHHHHhCCCC-CCCcC--EEE-Eeec----C--------------------CC---CCC-cHHHHHHHH
Q 010144 159 SEMDEIIFDTLDKLFARTDIS-PSEID--VLV-VNVS----L--------------------FS---PAP-SLTSRIINR 206 (517)
Q Consensus 159 ~ea~~la~~Aa~~aL~~agi~-p~dID--~LI-~a~s----~--------------------~~---~~P-s~a~~I~~~ 206 (517)
.....++..|+++|++++|++ ..+.+ .-+ +.++ . ++ ..| ..+..++..
T Consensus 69 d~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~ 148 (412)
T COG0304 69 DRFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIV 148 (412)
T ss_pred cHHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHH
Confidence 455789999999999999998 33343 222 2221 0 00 022 246788899
Q ss_pred cCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecC-CCC--------------C-------CCC-CCCc
Q 010144 207 YNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTES-MGP--------------N-------WYC-GREK 263 (517)
Q Consensus 207 LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~-~s~--------------~-------~~~-~~dr 263 (517)
+|+++ +.+.+.+ +|+++..|+..|.++|+.|..+.+++.++|. ++. . +.+ ..+|
T Consensus 149 ~g~~G--~~~~~~t-ACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~asrPfd~~R 225 (412)
T COG0304 149 FGLKG--PNYTPVT-ACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDKNR 225 (412)
T ss_pred hCCCC--CcCChhh-hHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccCCCCccccCCCCCCCC
Confidence 99975 8889998 9999999999999999999999999999977 221 1 011 1234
Q ss_pred cccccccccccceEEEEEeecccc
Q 010144 264 SMMLSNILFRSGGCSMLLTNNRAL 287 (517)
Q Consensus 264 ~~lv~~~lfGDGAAAvLLs~~~~~ 287 (517)
+ .+++|+||+++||+.....
T Consensus 226 d----Gfv~gEGag~lVLE~~ehA 245 (412)
T COG0304 226 D----GFVIGEGAGALVLEELEHA 245 (412)
T ss_pred C----CEEEecceeEEEecChhhH
Confidence 4 6899999999999986643
|
|
| >PRK09268 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.35 E-value=2.2e-06 Score=92.19 Aligned_cols=94 Identities=18% Similarity=0.196 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCC-CCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHc
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVSLF-SPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~-~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~a 239 (517)
..+|+.+|++++|+++|++++|||.+++++... ...+..+..+.-..|++...+++.+++ +|++++.|+..|..+|++
T Consensus 31 ~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl~~~~p~~~V~~-~CaSG~~ai~~A~~~I~s 109 (427)
T PRK09268 31 NQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPYTPAYDLQQ-ACGTGLEAAILVANKIAL 109 (427)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCCCCCCceeeeec-hhhHHHHHHHHHHHHHHC
Confidence 467899999999999999999999999986421 112345566555566765689999996 999999999999999999
Q ss_pred CCCCEEEEEEecCCCC
Q 010144 240 YKNKLAIVVSTESMGP 255 (517)
Q Consensus 240 g~~~~aLVVs~E~~s~ 255 (517)
|..+.+||++.|.+|.
T Consensus 110 G~~d~vlvgG~E~ms~ 125 (427)
T PRK09268 110 GQIDSGIAGGVDTTSD 125 (427)
T ss_pred CCCCEEEEeeEEccCC
Confidence 9999999999999885
|
|
| >COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.21 E-value=0.00025 Score=84.34 Aligned_cols=323 Identities=14% Similarity=0.099 Sum_probs=185.5
Q ss_pred CceEEEEEEEEeCCCCCceecHHHHHHHHHhcc----cCChHHHHHHHHHHHHhCC-----ceeEeccCC-CcC----CC
Q 010144 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNK----KLGLEEYRFLLKNMVSSGI-----GEETYGPRN-VVE----GR 148 (517)
Q Consensus 83 ~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~----~~~~~~~~~~~ri~~~sGI-----~~r~~~~~~-~~~----~~ 148 (517)
.+|-|+|++|.+|.- -+.++|.+.+..-. .+.++. +=.+..+- ..++|..-+ .+. .+
T Consensus 4 ~~IAIiGm~~rfPga----~~~~~~W~~l~~g~~~i~~ip~~r-----wd~~~~~~~~~~~~gk~~~~~ggfl~~~~~FD 74 (1061)
T COG3321 4 EPIAIIGMACRFPGA----DSPEEFWDLLKEGRDEITEVPADR-----WDVDAYYDPDPTVPGKSYSRWGGFLDDVDDFD 74 (1061)
T ss_pred CcEEEEeccccCCCC----CCHHHHHHHHhcCCceeeecChhh-----hhHhhccCCccccccccccccccccCCccccC
Confidence 349999999999996 78889998875421 122221 11111111 111121111 000 00
Q ss_pred CC----CccHHHhHhhHHHHHHHHHHHHHHhCCCCCCCcCE----EEEe-ecCCCCCC-------------------cHH
Q 010144 149 EE----SPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDV----LVVN-VSLFSPAP-------------------SLT 200 (517)
Q Consensus 149 ~~----~~~m~~~~~ea~~la~~Aa~~aL~~agi~p~dID~----LI~a-~s~~~~~P-------------------s~a 200 (517)
+. +|..++..+--..|..+.+-+|||++|+.|+.+.. |..+ +..+|... -.+
T Consensus 75 ~~fFgisPrEA~~mDPQqRllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a 154 (1061)
T COG3321 75 ALFFGISPREAEAMDPQQRLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAA 154 (1061)
T ss_pred HHHcCCCHHHHHhcCchHhHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHH
Confidence 00 11222222223458999999999999999988873 4444 33333221 257
Q ss_pred HHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCC--CC--------CCC------Ccc
Q 010144 201 SRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN--WY--------CGR------EKS 264 (517)
Q Consensus 201 ~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~--~~--------~~~------dr~ 264 (517)
.+|...|++++ +++.|.. +||+.+.|+++|.+-|..|..+.||+=+....-.. ++ ..+ |.+
T Consensus 155 ~Risy~l~l~G--Ps~~vdt-aCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~ 231 (1061)
T COG3321 155 GRISYVLGLSG--PSVTVDT-ACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDAD 231 (1061)
T ss_pred HHHHHHhcCCC--CCccccc-hhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcCCCCcceecccC
Confidence 89999999974 8999997 99999999999999999999888887776554221 00 111 111
Q ss_pred ccccccccccceEEEEEeecccccccchhhcccee-eeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhh
Q 010144 265 MMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLV-RTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNL 343 (517)
Q Consensus 265 ~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~-~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i 343 (517)
...++.|.|+++++|.+-.... +.+=++..++ .+....||+. + |+.. |..
T Consensus 232 --adG~v~geG~g~vvLKrl~~A~-~dgd~IyavI~gsavn~dG~~------------~-glta----P~~--------- 282 (1061)
T COG3321 232 --ADGYVRGEGAGVVVLKRLSDAE-RDGDRIYAVIRGSAVNQDGRS------------N-GLTA----PNL--------- 282 (1061)
T ss_pred --CCCEEEeeeEEEEEEEEhHHHH-hCCCeEEEEEEeeeeccCCCc------------C-CCCC----CCH---------
Confidence 1257899999999999754321 1111111222 1222233321 1 2110 100
Q ss_pred hhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHHH-----HHHhhCCCC-cc
Q 010144 344 QVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVID-----GTGKGLELD-EY 417 (517)
Q Consensus 344 ~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il~-----~i~~~Lgl~-~e 417 (517)
+ .-.+++++++ +.+++.| .+|+++=.|..|..+=| .+.+.++-. ++
T Consensus 283 -----------~-------aQ~~v~~~al-------~~a~i~p---~tv~yvEaHgTGT~lGDpiE~~aL~~v~~~~~~~ 334 (1061)
T COG3321 283 -----------E-------AQADVIREAL-------ADAGIDP---ATVQYVEAHGTGTPLGDPIEANALGAVYGEGAPA 334 (1061)
T ss_pred -----------H-------HHHHHHHHHH-------HhcCCCc---ccCcEEEecCCCCCCcCHHHHHHHHHHhccCCCC
Confidence 0 1123445555 6889997 89999999987655443 344444422 23
Q ss_pred cchhhhhcccCcccchhhHHHHHHHH---HHHcCCCC--------------------------------CCCEEEEEEec
Q 010144 418 DLEPARMALHRFGNTSAGGLWYVLGY---MEAKKRLK--------------------------------KGDRILMISLG 462 (517)
Q Consensus 418 ~~~~S~~~l~~~GNtsSASi~~~L~~---~~~~g~i~--------------------------------~Gd~VlliafG 462 (517)
....--..-.+.||+.+|.-...|-. +++.+.+. ..-+.-+-+||
T Consensus 335 ~~c~iGSvKsNiGH~~~AaGiagliK~~Lal~~~~ip~~l~~~~~np~i~~~~sp~~v~~~~~~W~~~~~prrAgvssfG 414 (1061)
T COG3321 335 QPCAIGSVKSNIGHLEAAAGIAGLIKTALALKHGYIPPTLHFDTPNPEIDFDSSPFVVPTEATPWPTGGGPRRAGVSSFG 414 (1061)
T ss_pred CcccccccccccccHHHHHHHHHHHHHHHhhhcCccCCcCCCCCCCcCCccccCCeEeecCCcCCCCCCCCceeeeeccC
Confidence 33222344578899998887766643 23333321 12356677788
Q ss_pred hhHHhheeeeEE
Q 010144 463 AGFKCNNCVWEV 474 (517)
Q Consensus 463 ~G~t~~a~vlr~ 474 (517)
.|.+=.-++++.
T Consensus 415 ~gGtNaHvIlEe 426 (1061)
T COG3321 415 FGGTNAHVILEE 426 (1061)
T ss_pred CCCCceEEEEee
Confidence 887777777765
|
|
| >PRK07855 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=98.06 E-value=1.7e-05 Score=84.29 Aligned_cols=84 Identities=12% Similarity=0.096 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCC
Q 010144 162 DEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYK 241 (517)
Q Consensus 162 ~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~ 241 (517)
.+|+.+|+++||+++|++++|||.+++.+. . ..+. ..+++.+|+++..+...+.+ ||+++..++..|...|++|.
T Consensus 25 ~~L~~eA~~~Al~DAgl~~~dID~~~~~~~-~-~~~~--~~l~~~lGl~~~~~~~~v~~-gg~sg~~~~~~A~~~I~sG~ 99 (386)
T PRK07855 25 LRLACEAVLAALDDAGLAPSDVDGLVTFTM-D-TNPE--IAVARALGIGELKFFSRIHY-GGGAACATVQQAAMAVATGV 99 (386)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecC-c-cccH--HHHHHHCCCCCCcceeeecC-CcHHHHHHHHHHHHHHHCCC
Confidence 467899999999999999999999987432 1 2222 56889999974245568886 99999999999999999999
Q ss_pred CCEEEEEEe
Q 010144 242 NKLAIVVST 250 (517)
Q Consensus 242 ~~~aLVVs~ 250 (517)
.+.|||+++
T Consensus 100 ~d~vLv~g~ 108 (386)
T PRK07855 100 ADVVVCYRA 108 (386)
T ss_pred CCEEEEEee
Confidence 999999987
|
|
| >KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00015 Score=73.26 Aligned_cols=94 Identities=21% Similarity=0.292 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHH-HHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcC
Q 010144 162 DEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRII-NRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTY 240 (517)
Q Consensus 162 ~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~-~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag 240 (517)
-+|...+.+..+++++++|+.|+-|++.+...--.-...++++ -.-|++..++..-++- -|++|++|+.....-|++|
T Consensus 62 DeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~ga~e~R~a~~~ag~P~tvpv~tvNR-qCsSGLqaVadiA~~Ir~G 140 (435)
T KOG1389|consen 62 DELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSGASECRMAAFYAGFPETVPVRTVNR-QCSSGLQAVADIAAKIRAG 140 (435)
T ss_pred HHHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcchHHHHHHHHHcCCCcccchhhhhh-hhhhHHHHHHHHHHHHhcC
Confidence 3557888999999999999999988887532111124444444 4558887777777885 9999999999999999999
Q ss_pred CCCEEEEEEecCCCCC
Q 010144 241 KNKLAIVVSTESMGPN 256 (517)
Q Consensus 241 ~~~~aLVVs~E~~s~~ 256 (517)
.++-.|-.+.|.++.+
T Consensus 141 ~ydIGla~GvESMt~~ 156 (435)
T KOG1389|consen 141 FYDIGLAAGVESMTTN 156 (435)
T ss_pred ceeeecccchhhhccc
Confidence 9999999999988764
|
|
| >COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00027 Score=75.36 Aligned_cols=93 Identities=15% Similarity=0.282 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHHHhC--CCCCCCcCEEEEeecCC--CCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHH
Q 010144 162 DEIIFDTLDKLFART--DISPSEIDVLVVNVSLF--SPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLF 237 (517)
Q Consensus 162 ~~la~~Aa~~aL~~a--gi~p~dID~LI~a~s~~--~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL 237 (517)
+++.....+..+++. ++++.+||-++..|... ...+..+..++...|++.+++.+.++. +|++++.|+..|...|
T Consensus 28 e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~~~~p~~~V~~-~c~SG~~Av~~A~~~I 106 (392)
T COG0183 28 EALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLPGSVPAVTVNR-ACASGLAAVRLAAQAI 106 (392)
T ss_pred HHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCCCCCCceEEec-cchhHHHHHHHHHHHH
Confidence 344455555555433 67777888888875422 246678889999999997799999996 9999999999999999
Q ss_pred HcCCCCEEEEEEecCCCC
Q 010144 238 RTYKNKLAIVVSTESMGP 255 (517)
Q Consensus 238 ~ag~~~~aLVVs~E~~s~ 255 (517)
++|..+.+|+++.|++|.
T Consensus 107 ~sG~~dvvlagG~E~mS~ 124 (392)
T COG0183 107 ASGEADVVLAGGVEKMSD 124 (392)
T ss_pred HCCCCCEEEEEeeeeccC
Confidence 999999999999999987
|
|
| >KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00092 Score=68.97 Aligned_cols=177 Identities=15% Similarity=0.179 Sum_probs=113.9
Q ss_pred hcCCCceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeE-------------eccCCCc
Q 010144 79 QKRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEET-------------YGPRNVV 145 (517)
Q Consensus 79 ~~~~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~-------------~~~~~~~ 145 (517)
+++.+.|.|.|+|+..|=. .+.+...+.+-. .++||..-. ..|. +
T Consensus 20 ~~~~rRVVITGmG~VTplG----~~v~~~w~~Ll~----------------GesGI~~l~~~d~k~~p~~v~g~Ip~--f 77 (440)
T KOG1394|consen 20 KSRMRRVVITGMGAVTPLG----NGVHTSWRNLLS----------------GESGISSLEGPDYKSIPFTVAGKIPR--F 77 (440)
T ss_pred CCcceeEEEeccceeecCC----CChHHHHHHhhc----------------cccCcccccccccccCcchheeeccc--c
Confidence 4567899999999999988 666666554311 122222111 1111 0
Q ss_pred CCCCC--CccHHHhHhhHHHHHHHHHHHHHHhCCCCCC---CcC-----EEEEee----------------------cCC
Q 010144 146 EGREE--SPSLAEAFSEMDEIIFDTLDKLFARTDISPS---EID-----VLVVNV----------------------SLF 193 (517)
Q Consensus 146 ~~~~~--~~~m~~~~~ea~~la~~Aa~~aL~~agi~p~---dID-----~LI~a~----------------------s~~ 193 (517)
..++ +..-.........++..|+++||+++++-+. +.| ++|-.+ ||
T Consensus 78 -~~e~~~s~~~~r~ms~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsP- 155 (440)
T KOG1394|consen 78 -SVEDYVSKGDERRMSKFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSP- 155 (440)
T ss_pred -ccccccchhhhhhhhHHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCc-
Confidence 0011 0011112245688999999999999998765 222 233211 12
Q ss_pred CCCCc-----HHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCCC-----------
Q 010144 194 SPAPS-----LTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNW----------- 257 (517)
Q Consensus 194 ~~~Ps-----~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~~----------- 257 (517)
+..|- .+.+|.-+||+++ +...++. +|+.+..++--|.++|+.|..+..|-=++|.+-...
T Consensus 156 ffVPkil~NM~ag~vsm~~gl~G--pnhsvST-ACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RAL 232 (440)
T KOG1394|consen 156 FFVPKILTNMAAGYVSMKYGLRG--PNHSVST-ACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARAL 232 (440)
T ss_pred cccchhhcccccchhhhhhcCcC--CchhhHh-hhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHh
Confidence 23342 3689999999974 8888997 999999999999999999988887777788753210
Q ss_pred -C---C------C--CCccccccccccccceEEEEEeeccc
Q 010144 258 -Y---C------G--REKSMMLSNILFRSGGCSMLLTNNRA 286 (517)
Q Consensus 258 -~---~------~--~dr~~lv~~~lfGDGAAAvLLs~~~~ 286 (517)
. + + .+|+ .+++|+|++.+||+.-+.
T Consensus 233 St~nd~P~~aSRPfD~~Rd----GFVmGEGagvlvlEelEH 269 (440)
T KOG1394|consen 233 STRNDNPQKASRPFDKKRD----GFVMGEGAGVLVLEELEH 269 (440)
T ss_pred hhcCCCccccCCCCccCCC----ceeeccceeEEehHhHHH
Confidence 0 0 1 1233 689999999999986443
|
|
| >PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.00064 Score=69.20 Aligned_cols=61 Identities=25% Similarity=0.298 Sum_probs=46.1
Q ss_pred cchhhhhcccCcccchhhHHHHHHHHHH--HcCCCCCCCEEEEEEechhHHhheeeeEEeccC
Q 010144 418 DLEPARMALHRFGNTSAGGLWYVLGYME--AKKRLKKGDRILMISLGAGFKCNNCVWEVMKDL 478 (517)
Q Consensus 418 ~~~~S~~~l~~~GNtsSASi~~~L~~~~--~~g~i~~Gd~VlliafG~G~t~~a~vlr~~~~~ 478 (517)
++.||...-++.||+.+||+++.|+.++ ..+..-.|++|++.|+|+|.......+++...-
T Consensus 143 kv~psl~~~~~vGN~YTaSly~~L~SlL~~~~~~~l~GkrI~~FSYGSG~~s~~fs~~v~~~~ 205 (282)
T PF08540_consen 143 KVEPSLLYSRQVGNMYTASLYLGLASLLSSAEADDLAGKRIGMFSYGSGLASEFFSGRVQPGA 205 (282)
T ss_dssp HCHHHTHHHHHHB--GGGHHHHHHHHHHHHHHSCHHTT-EEEEEEEETTTEEEEEEEEE-TTG
T ss_pred HHhHHHHHHHHcCceehHHHHHHHHHHhhccCccccCCCEEEEEEecCCcceeEEEEEEeCCc
Confidence 5667777778999999999999999998 334444799999999999998777777775433
|
Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the C-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1TXT_D 1TVZ_A 1X9E_B 2HDB_B 3V4X_A 3V4N_C 2P8U_A 2FA0_A 2F9A_A 2F82_A .... |
| >KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.00036 Score=69.21 Aligned_cols=86 Identities=21% Similarity=0.272 Sum_probs=70.9
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCC
Q 010144 165 IFDTLDKLFARTDISPSEIDVLVVN-VSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNK 243 (517)
Q Consensus 165 a~~Aa~~aL~~agi~p~dID~LI~a-~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~ 243 (517)
+.+|..++|++++++-++|+--++. ...+. ....+-..++|+. .++.|++++ .|+++-.||-+|++++++|..+
T Consensus 33 a~ea~tkal~da~ikys~vqqa~vgyvfgds---tcgqraiyevgmt-gipi~nvnn-ncatgssalflakqiiesgn~d 107 (408)
T KOG1406|consen 33 AKEAITKALQDAGIKYSEVQQAVVGYVFGDS---TCGQRAIYEVGMT-GIPIYNVNN-NCATGSSALFLAKQIIESGNSD 107 (408)
T ss_pred HHHHHHHHHHhcCCCHHHHHhhhheeeecCC---ccchHHHHhcccc-CcceeeccC-ccccCchHHHHHHHHHhcCCcc
Confidence 6999999999999999998854443 11111 1123445589997 799999998 9999999999999999999999
Q ss_pred EEEEEEecCCCC
Q 010144 244 LAIVVSTESMGP 255 (517)
Q Consensus 244 ~aLVVs~E~~s~ 255 (517)
.+|..+-|.+++
T Consensus 108 cvlalgfekm~~ 119 (408)
T KOG1406|consen 108 CVLALGFEKMER 119 (408)
T ss_pred eEEeechhhhCC
Confidence 999999999876
|
|
| >KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.00077 Score=68.53 Aligned_cols=95 Identities=16% Similarity=0.163 Sum_probs=80.4
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHH
Q 010144 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (517)
Q Consensus 160 ea~~la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ 238 (517)
.|.+|+.-|++.+|++++++|+|++-+|+.+ .+-+.--..+.+.+---|++.++.+..++ +.|++++.|+.+|.+-|+
T Consensus 29 ~A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGlp~sv~~tTvN-kvCaSgmKAv~laaQsI~ 107 (396)
T KOG1390|consen 29 TATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGLPYSVPATTVN-KVCASGMKAVILAAQSIQ 107 (396)
T ss_pred chhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCCCcceeeEeeh-hhhhhhHHHHHHHHHHHh
Confidence 3567789999999999999999999898863 23344444556666677888889999999 699999999999999999
Q ss_pred cCCCCEEEEEEecCCCC
Q 010144 239 TYKNKLAIVVSTESMGP 255 (517)
Q Consensus 239 ag~~~~aLVVs~E~~s~ 255 (517)
.|..+.++..+.|.+|.
T Consensus 108 ~G~~divVaGGmEsMS~ 124 (396)
T KOG1390|consen 108 TGHADIVVAGGMESMSN 124 (396)
T ss_pred cCCccEEEecccchhcc
Confidence 99999999999999987
|
|
| >KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.029 Score=55.82 Aligned_cols=92 Identities=11% Similarity=0.131 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEe----ecCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHH
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVN----VSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQL 236 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a----~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~l 236 (517)
+.+|..-|++.+|..+++.++.+|.+|+. +|.|-. -++..|--+-|.+.+.+++.|+- =|.++.+++-.+.+-
T Consensus 28 aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDgI--Yl~RHvGL~~GvP~e~pALtiNR-LCGSGFQsiVNgaQ~ 104 (396)
T KOG1391|consen 28 ATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDGI--YLARHVGLRVGVPKETPALTINR-LCGSGFQSIVNGAQE 104 (396)
T ss_pred hhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCce--EeeeccccccCCcCccCceeehh-hhcccHHHHHhhHHH
Confidence 45667999999999999999999999985 333321 22344444555667789999996 999999999999999
Q ss_pred HHcCCCCEEEEEEecCCCC
Q 010144 237 FRTYKNKLAIVVSTESMGP 255 (517)
Q Consensus 237 L~ag~~~~aLVVs~E~~s~ 255 (517)
+..+..+-+|.=++|++|.
T Consensus 105 I~vgea~ivL~GGtEnMSq 123 (396)
T KOG1391|consen 105 ICVGEAEIVLCGGTENMSQ 123 (396)
T ss_pred hhcCcceEEEecCcccccc
Confidence 9999888999999999986
|
|
| >PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 | Back alignment and domain information |
|---|
Probab=94.61 E-value=0.037 Score=46.11 Aligned_cols=75 Identities=15% Similarity=0.209 Sum_probs=46.7
Q ss_pred HHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEE---ecCCcchHHHHHHHHHHHHHHcCCCCEEEEEE
Q 010144 173 FARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFN---LSGMGCSASVVAVDLVQQLFRTYKNKLAIVVS 249 (517)
Q Consensus 173 L~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~d---l~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs 249 (517)
|+++|++++|||.++.... .......+.+++|++++....+ .++++|++-+.+|..+.+-=+..+.+++|+++
T Consensus 1 L~~~g~~~~did~~i~hq~----~~~~~~~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~~ 76 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQA----SKKILDSIAKRLGIPPERFPDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLVG 76 (90)
T ss_dssp HHHTT--GGGESEEEE-SS----SHHHHHHHHHHHTS-GGGBE-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEEE
T ss_pred CccccCCHHHCCEEEeCCC----CHHHHHHHHHHcCCcHHHHHHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEEE
Confidence 6899999999999998642 2345566889999986544333 34567777777776655532334667888887
Q ss_pred ec
Q 010144 250 TE 251 (517)
Q Consensus 250 ~E 251 (517)
.-
T Consensus 77 ~G 78 (90)
T PF08541_consen 77 FG 78 (90)
T ss_dssp EE
T ss_pred EE
Confidence 53
|
3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B .... |
| >TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative | Back alignment and domain information |
|---|
Probab=94.10 E-value=0.17 Score=53.05 Aligned_cols=82 Identities=11% Similarity=0.109 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeE-----EEecCCcchHHHHHHHHHHHH
Q 010144 162 DEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKA-----FNLSGMGCSASVVAVDLVQQL 236 (517)
Q Consensus 162 ~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~-----~dl~~mgCsggl~AL~lA~~l 236 (517)
...+..+++++|+++|++++|||.+++... .+.+-..+.++||++++-.. -+++++++++...+|..+...
T Consensus 207 ~~~~~~~~~~~L~~~gl~~~did~~i~Hq~----~~~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~~ 282 (345)
T TIGR00748 207 FHHVVTAAKGLMEKLGLTPEDFDYAVFHQP----NGKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVLDI 282 (345)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEeCCC----ChHHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHHHh
Confidence 444568999999999999999999987642 23455668999999753222 277888899999998777553
Q ss_pred HHcCCCCEEEEEE
Q 010144 237 FRTYKNKLAIVVS 249 (517)
Q Consensus 237 L~ag~~~~aLVVs 249 (517)
+ .+.+++|+++
T Consensus 283 ~--~~Gd~vll~~ 293 (345)
T TIGR00748 283 A--EPGDRILAVS 293 (345)
T ss_pred c--CCCCEEEEEE
Confidence 2 3445555554
|
Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound. |
| >PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=93.38 E-value=0.33 Score=51.49 Aligned_cols=91 Identities=12% Similarity=0.196 Sum_probs=62.1
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHc-----CCCCCe---eEEEecCCcchHHHHHH
Q 010144 159 SEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRY-----NLRNDI---KAFNLSGMGCSASVVAV 230 (517)
Q Consensus 159 ~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~L-----Gl~~~~---~~~dl~~mgCsggl~AL 230 (517)
+.+...+.++++++|+++|++++|||.++... ..+..-..+.++| |++++- ..-+.++++|++...+|
T Consensus 268 ~~~~~~~~~~i~~~L~~~gl~~~DId~~v~Hq----~n~~~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi~L 343 (378)
T PRK06816 268 ENIVVYTIKPLLELVDKRNLDPDDIDYFLPHY----SSEYFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIML 343 (378)
T ss_pred HHhHHHHHHHHHHHHHHcCCChhhCCEEeeCc----ccHHHHHHHHHHHHhccCCCChhheEEeccccccccchHHHHHH
Confidence 33455668899999999999999999998654 2334455677776 776432 12366777888888888
Q ss_pred HHHHHHHHcCCCCEEEEEEecCC
Q 010144 231 DLVQQLFRTYKNKLAIVVSTESM 253 (517)
Q Consensus 231 ~lA~~lL~ag~~~~aLVVs~E~~ 253 (517)
..|..-=+-.+++++++++.+.-
T Consensus 344 ~~a~~~g~~~~Gd~vl~~~~~s~ 366 (378)
T PRK06816 344 DELLNSGRLKPGQKILCFVPESG 366 (378)
T ss_pred HHHHHcCCCCCCCEEEEEEeccc
Confidence 76633111235678888877753
|
|
| >PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=93.25 E-value=0.25 Score=51.19 Aligned_cols=90 Identities=12% Similarity=0.150 Sum_probs=59.8
Q ss_pred HhhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEE---EecCCcchHHHHHHHHHH
Q 010144 158 FSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAF---NLSGMGCSASVVAVDLVQ 234 (517)
Q Consensus 158 ~~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~---dl~~mgCsggl~AL~lA~ 234 (517)
.+++...+.++.+++|+++|++++|||.+++.. ..+..-..+.++||++++-... ..+++++++...+|+.+.
T Consensus 234 ~~~~~~~~~~~~~~~L~~~g~~~~did~~i~H~----~~~~~~~~~~~~lgl~~~k~~~~~~~~GN~~sas~~~~L~~~~ 309 (338)
T PRK09258 234 LKEGVELAVDTWEAFLAQLGWAVEQVDRVICHQ----VGAAHTRAILKALGIDPEKVFTTFPTLGNMGPASLPITLAMAA 309 (338)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEecCC----CCHHHHHHHHHHhCCCHHHceehHhhhCCcHHhHHHHHHHHHH
Confidence 345566777899999999999999999888754 2234556889999997533322 356666677777776553
Q ss_pred HHHHcCCCCEEEEEEec
Q 010144 235 QLFRTYKNKLAIVVSTE 251 (517)
Q Consensus 235 ~lL~ag~~~~aLVVs~E 251 (517)
+-=+-.+.+++|+++..
T Consensus 310 ~~g~~~~Gd~vll~~~G 326 (338)
T PRK09258 310 EEGFLKPGDRVALLGIG 326 (338)
T ss_pred HhCCCCCCCEEEEEEec
Confidence 21001245777777643
|
|
| >PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=93.20 E-value=1.7 Score=42.86 Aligned_cols=115 Identities=10% Similarity=0.002 Sum_probs=78.2
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecC----------------CCCCCc---------HHHHHHHHcCCCCCee
Q 010144 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVSL----------------FSPAPS---------LTSRIINRYNLRNDIK 214 (517)
Q Consensus 160 ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~----------------~~~~Ps---------~a~~I~~~LGl~~~~~ 214 (517)
....|++.++.+++++. .++|.+|+++.. ....|. .+.++.-..|.. ..
T Consensus 33 ~~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~~--~~ 106 (218)
T PF13723_consen 33 RLSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKNT--GP 106 (218)
T ss_pred HHHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCCC--Cc
Confidence 45778899999988653 467788887521 112331 244444455553 57
Q ss_pred EEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeeccc
Q 010144 215 AFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRA 286 (517)
Q Consensus 215 ~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~ 286 (517)
..-+.+ |=.++-.||--|..+++.+ .+.||||+.|-.....|.....+ .....-.|.|++|+++..
T Consensus 107 ~tal~a-~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p~~y~~~~~~----~~~~~~~A~al~L~~~~~ 172 (218)
T PF13723_consen 107 NTALAA-GEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLPEPYQEFRPE----RDPPFPYALALVLSPGDS 172 (218)
T ss_pred eEEEec-CcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCChhhhhcccc----cCCCcCEEEEEEecCCCC
Confidence 778886 8889999999999999999 89999999999776433322111 122345678888887654
|
|
| >PRK06025 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=93.03 E-value=0.32 Score=52.44 Aligned_cols=91 Identities=16% Similarity=0.304 Sum_probs=63.6
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecC--------CcchHHHHHHHHHHHHH
Q 010144 166 FDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSG--------MGCSASVVAVDLVQQLF 237 (517)
Q Consensus 166 ~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~--------mgCsggl~AL~lA~~lL 237 (517)
..|++++|+++|++++|||.+.++- ......-...+++|+.. ..+++++ .|++|....+.++.++.
T Consensus 318 ~~Ai~~aL~~AGl~~~DID~~ei~e----aFa~~~l~~~~~lg~~~--~~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~ 391 (417)
T PRK06025 318 VPAAKKVLAKAGLTKDDIDLWEINE----AFAVVAEKFIRDLDLDR--DKVNVNGGAIALGHPIGATGSILIGTVLDELE 391 (417)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEEch----HHHHHHHHHHHHcCCCh--hhccccCCHHhcCCchhHHHHHHHHHHHHHHH
Confidence 4799999999999999999987652 12344456778888763 3455555 26788888888888887
Q ss_pred HcCCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEee
Q 010144 238 RTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTN 283 (517)
Q Consensus 238 ~ag~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~ 283 (517)
+.+ .++.|+ ..|..|-.++|+||++
T Consensus 392 ~~g-~~~Gl~--------------------~~c~~GG~g~A~lle~ 416 (417)
T PRK06025 392 RRG-LKRGLV--------------------TMCAAGGMAPAIIIER 416 (417)
T ss_pred HhC-CCeEEE--------------------EEEeeccceeEEEEEe
Confidence 654 344422 2466677778888875
|
|
| >PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=92.72 E-value=0.21 Score=51.58 Aligned_cols=88 Identities=8% Similarity=0.155 Sum_probs=58.5
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeE---EEecCCcchHHHHHHHHHHH
Q 010144 159 SEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKA---FNLSGMGCSASVVAVDLVQQ 235 (517)
Q Consensus 159 ~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~---~dl~~mgCsggl~AL~lA~~ 235 (517)
+.+.+...++.+++|+++|++++|||.++... ..+..-..+.++||++++-.. -+.+++++++...+|+.+..
T Consensus 223 ~~~~~~~~~~~~~~L~~~gl~~~did~~~~h~----~~~~~~~~~~~~l~l~~~k~~~~l~~~Gn~~sas~~~~L~~~~~ 298 (326)
T PRK05963 223 TEAVRMMSGASQNVLASAAMTPQDIDRFFPHQ----ANARIVDKVCETIGIPRAKAASTLETYGNSSAATIPLSLSLANL 298 (326)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCC----CCHHHHHHHHHHcCCCHHHhhhhHHhhCcHHHHHHHHHHHHHHH
Confidence 44566778899999999999999999988743 235566778999999754332 24445566666666654432
Q ss_pred HHHcCCCCEEEEEEe
Q 010144 236 LFRTYKNKLAIVVST 250 (517)
Q Consensus 236 lL~ag~~~~aLVVs~ 250 (517)
-=+..+.+++|+++.
T Consensus 299 ~~~~~~Gd~vll~~~ 313 (326)
T PRK05963 299 EQPLREGERLLFAAA 313 (326)
T ss_pred hCCCCCCCEEEEEEE
Confidence 101124567777764
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.67 E-value=1.2 Score=52.93 Aligned_cols=255 Identities=16% Similarity=0.189 Sum_probs=145.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcC----EEEEeec-CC-----CCCC----------cHHHHHHHHc----CCCCCeeEEE
Q 010144 162 DEIIFDTLDKLFARTDISPSEID----VLVVNVS-LF-----SPAP----------SLTSRIINRY----NLRNDIKAFN 217 (517)
Q Consensus 162 ~~la~~Aa~~aL~~agi~p~dID----~LI~a~s-~~-----~~~P----------s~a~~I~~~L----Gl~~~~~~~d 217 (517)
..|..+|.-+|+-++||+|.+.. .+.+.|+ +. ...| ..-+|.++++ .++ -++|.
T Consensus 88 ~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDfq--GPS~s 165 (2376)
T KOG1202|consen 88 LRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDFQ--GPSFS 165 (2376)
T ss_pred HHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEecc--CCchh
Confidence 46789999999999999998764 3333332 11 0011 1235555654 343 36777
Q ss_pred ecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCC-----C-----CCC--C----CccccccccccccceEEEEE
Q 010144 218 LSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN-----W-----YCG--R----EKSMMLSNILFRSGGCSMLL 281 (517)
Q Consensus 218 l~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~-----~-----~~~--~----dr~~lv~~~lfGDGAAAvLL 281 (517)
+.. +|++.+.||+.|.+-++++..++|+|-++..+-.. | ..+ + |.+. ...-=+||.+|++|
T Consensus 166 ~Dt-acsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeag--nGY~Rseg~~avll 242 (2376)
T KOG1202|consen 166 VDT-ACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAG--NGYCRSEGVVAVLL 242 (2376)
T ss_pred hhh-hhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcCCCCcccchhccC--CceeecCceEEEEE
Confidence 886 99999999999999999999999999887765321 1 111 1 1111 13455799999999
Q ss_pred eecccccccchhhccceeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHH
Q 010144 282 TNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVI 361 (517)
Q Consensus 282 s~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~ 361 (517)
.++...++ -|. .++...+.+||-.- .|+.+ |. |+ + .+
T Consensus 243 qrk~~ArR--vYA--tilnartNTDGfKE------------qGvTf----P~--G~-----~----------Q~------ 279 (2376)
T KOG1202|consen 243 QRKSLARR--VYA--TILNARTNTDGFKE------------QGVTF----PS--GD-----M----------QE------ 279 (2376)
T ss_pred ehhHHHHH--HHH--HhhccccCCCchhh------------cCccC----CC--cH-----H----------HH------
Confidence 98765421 231 23433344454211 11211 00 00 0 01
Q ss_pred HHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHHH-----HHHhhCCCCcccchhh--hhcccCcccchh
Q 010144 362 QSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVID-----GTGKGLELDEYDLEPA--RMALHRFGNTSA 434 (517)
Q Consensus 362 ~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il~-----~i~~~Lgl~~e~~~~S--~~~l~~~GNtsS 434 (517)
+.+++.. ++.|+.| +++-++=.|-.|.++=| .|.+-+=- .+..|- -.+=.+-||.-.
T Consensus 280 ----qLi~e~Y-------se~Gl~P---~sv~YvEAHGtGTkVGDpQEaN~it~~fC~--~Rt~pLLIGSvKSNMGHaEP 343 (2376)
T KOG1202|consen 280 ----QLIRETY-------SEAGLNP---ESVVYVEAHGTGTKVGDPQEANGITRFFCA--TRTTPLLIGSVKSNMGHAEP 343 (2376)
T ss_pred ----HHHHHHH-------HhcCCCc---ccEEEEEeccCCCCCCChHHhhhHHHHHhh--cCCCceEeeeccccCCCCCc
Confidence 1112222 5789997 88988888977655432 22222111 111100 112244566555
Q ss_pred hHHHHHHHHHH---HcC---------------------CCC--------CCCEEEEEEechhHHhheeeeEEeccCCC
Q 010144 435 GGLWYVLGYME---AKK---------------------RLK--------KGDRILMISLGAGFKCNNCVWEVMKDLED 480 (517)
Q Consensus 435 ASi~~~L~~~~---~~g---------------------~i~--------~Gd~VlliafG~G~t~~a~vlr~~~~~~~ 480 (517)
||-.-.|+..+ ++| |++ +|..|-+=+||.|-+-.-.+++....++|
T Consensus 344 ASGv~alaKillsmE~glip~NLHy~tPNp~ip~L~dGrLkVVd~~lp~~GGivGiNSFGFGGsN~HviLks~~~~~P 421 (2376)
T KOG1202|consen 344 ASGVCALAKILLSMEEGLIPPNLHYNTPNPEIPALVDGRLKVVDRPLPWRGGIVGINSFGFGGSNAHVILKSNTKPKP 421 (2376)
T ss_pred cchHHHHHHHHHHHHhCcCCCccccCCCCCCcchhccceeEEecCCCCccCceeeeeccccCCCceeEEeccCCCCCC
Confidence 55544444321 222 222 47788899999998878888888777765
|
|
| >PRK06366 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=92.49 E-value=0.62 Score=49.72 Aligned_cols=88 Identities=9% Similarity=0.001 Sum_probs=53.5
Q ss_pred hhhCCCCCcccccceeecCCCChHHHHHHHhhCCCCcccchhhhhcccCcccchhhH---HHHHHHHHHHcCCCCCCCEE
Q 010144 380 AVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGG---LWYVLGYMEAKKRLKKGDRI 456 (517)
Q Consensus 380 ~~~g~~~d~~~did~~~~Hq~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSAS---i~~~L~~~~~~g~i~~Gd~V 456 (517)
+++|++| +|||.+=+|-.-....-...|.||++.+++.+|=- +--+||-..|| +...|.+.++. +.|.+.
T Consensus 296 ~~Agl~~---~DiDv~Ei~daFa~~~l~~le~lgl~g~~vN~~GG-~la~GHP~GatG~~~~~~l~~qL~~---~~~~~g 368 (388)
T PRK06366 296 EKQNKSI---DYYDLVEHNEAFSIASIIVRDQLKIDNERFNVNGG-AVAIGHPIGNSGSRIIVTLINALKT---RHMKTG 368 (388)
T ss_pred HHcCCCH---HHcceeeccchhHHHHHHHHHHhCCCCCccCCCCc-hhhhCCCcCCCHHHHHHHHHHHHHh---cCCCeE
Confidence 6899996 89999999988777667778999999888764322 22355554443 44444444432 223333
Q ss_pred E-EEEechhHHhheeeeEEe
Q 010144 457 L-MISLGAGFKCNNCVWEVM 475 (517)
Q Consensus 457 l-liafG~G~t~~a~vlr~~ 475 (517)
+ .+..|.| .-.+++++..
T Consensus 369 ~~~~c~~gg-~g~a~~~e~~ 387 (388)
T PRK06366 369 LATLCHGGG-GAHTLTLEMV 387 (388)
T ss_pred EEEEecccC-hhhEEEEEec
Confidence 3 2333333 3456666653
|
|
| >PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=92.25 E-value=0.26 Score=50.91 Aligned_cols=83 Identities=12% Similarity=0.165 Sum_probs=55.1
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeE---EEecCCcchHHHHHHHHHHHH
Q 010144 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKA---FNLSGMGCSASVVAVDLVQQL 236 (517)
Q Consensus 160 ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~---~dl~~mgCsggl~AL~lA~~l 236 (517)
.+.....++.+++|+++|++++|||.++.... ....-..++++||++++... -+.++++|++...+|+.+
T Consensus 227 ~~~~~~~~~i~~~L~~~gl~~~did~~~~H~~----~~~~~~~i~~~l~l~~e~~~~~~~~~Gn~~sas~~~~L~~~--- 299 (329)
T PRK07204 227 LSSKYLMKFIDKLLMDAGYTLADIDLIVPHQA----SGPAMRLIRKKLGVDEERFVTIFEDHGNMIAASIPVALFEA--- 299 (329)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCC----CHHHHHHHHHHcCCCHHHhhhhHhhhCcHHHHHHHHHHHHH---
Confidence 44556678899999999999999999887542 12345688999999854333 244555555555666543
Q ss_pred HHcC---CCCEEEEEE
Q 010144 237 FRTY---KNKLAIVVS 249 (517)
Q Consensus 237 L~ag---~~~~aLVVs 249 (517)
++.+ +.+++|+++
T Consensus 300 ~~~g~~~~Gd~vll~~ 315 (329)
T PRK07204 300 IKQKKVQRGNKILLLG 315 (329)
T ss_pred HHcCCCCCCCEEEEEE
Confidence 4443 346666665
|
|
| >TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | Back alignment and domain information |
|---|
Probab=91.44 E-value=0.52 Score=48.36 Aligned_cols=84 Identities=15% Similarity=0.221 Sum_probs=55.9
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCee--EE-EecCCcchHHHHHHHHHHHH
Q 010144 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIK--AF-NLSGMGCSASVVAVDLVQQL 236 (517)
Q Consensus 160 ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~--~~-dl~~mgCsggl~AL~lA~~l 236 (517)
.+.+...++.+++|+++|++++|||.++... +.+..-..+++.||++.+-. .+ ..++++|++-+.+|..+.
T Consensus 216 ~~~~~~~~~~~~~l~~~g~~~~di~~~~~h~----~~~~~~~~~~~~lgi~~~k~~~~~~~~Gn~~sas~~~~L~~~~-- 289 (318)
T TIGR00747 216 HAVRKMGDVVEETLEANGLDPEDIDWFVPHQ----ANLRIIEALAKRLELDMSQVVKTVHKYGNTSAASIPLALDELL-- 289 (318)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHcCCCHHHeeehHhhhCCHHHHHHHHHHHHHH--
Confidence 4445567789999999999999999998643 24456678999999985322 12 234556666666665443
Q ss_pred HHcC---CCCEEEEEEe
Q 010144 237 FRTY---KNKLAIVVST 250 (517)
Q Consensus 237 L~ag---~~~~aLVVs~ 250 (517)
+.+ +.+++|+++.
T Consensus 290 -~~~~~~~Gd~vll~~~ 305 (318)
T TIGR00747 290 -RTGRIKPGDLLLLVAF 305 (318)
T ss_pred -HcCCCCCCCEEEEEEE
Confidence 333 3466666653
|
Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment. |
| >PRK04262 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=91.16 E-value=0.45 Score=49.78 Aligned_cols=81 Identities=15% Similarity=0.222 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeE-----EEecCCcchHHHHHHHHHHHHH
Q 010144 163 EIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKA-----FNLSGMGCSASVVAVDLVQQLF 237 (517)
Q Consensus 163 ~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~-----~dl~~mgCsggl~AL~lA~~lL 237 (517)
....++.+++|+++|++++|||.+++.. ..+.+-..++++||++++-.. -+.+++++++...+|..+..
T Consensus 209 ~~~~~~i~~~L~~~gl~~~dId~~v~Hq----~n~~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~~-- 282 (347)
T PRK04262 209 KHIISAAKGLMEKLGLKPSDYDYAVFHQ----PNGKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVLD-- 282 (347)
T ss_pred HHHHHHHHHHHHHhCcCHHHhceeecCC----CchHHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHHH--
Confidence 4567789999999999999999888753 234455678899999754222 26677777787788876654
Q ss_pred HcCCCCEEEEEE
Q 010144 238 RTYKNKLAIVVS 249 (517)
Q Consensus 238 ~ag~~~~aLVVs 249 (517)
+..+.+++|+++
T Consensus 283 ~~~~Gd~vll~~ 294 (347)
T PRK04262 283 VAKPGDRILVVS 294 (347)
T ss_pred hCCCCCEEEEEe
Confidence 223444555444
|
|
| >PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III | Back alignment and domain information |
|---|
Probab=91.16 E-value=0.44 Score=50.56 Aligned_cols=86 Identities=9% Similarity=0.145 Sum_probs=57.3
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeE---EEecCCcchHHHHHHHHHHHH
Q 010144 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKA---FNLSGMGCSASVVAVDLVQQL 236 (517)
Q Consensus 160 ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~---~dl~~mgCsggl~AL~lA~~l 236 (517)
.+.....++++++|+++|++++|||.++.... -+.+-..++++||++++-.. -+.+++++++.+.+|+.+..-
T Consensus 277 ~~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~----n~~~~~~~~~~Lgl~~ek~~~~l~~~GNt~sAsi~~~L~~~~~~ 352 (379)
T PLN02326 277 FAVRCVPQVIESALQKAGLTAESIDWLLLHQA----NQRIIDAVAQRLGIPPEKVISNLANYGNTSAASIPLALDEAVRS 352 (379)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCHHHeeecHhhcCcHHHHHHHHHHHHHHHc
Confidence 44455667899999999999999998887542 23444668999999854222 356667777777777655321
Q ss_pred HHcCCCCEEEEEE
Q 010144 237 FRTYKNKLAIVVS 249 (517)
Q Consensus 237 L~ag~~~~aLVVs 249 (517)
=...+.+++|+++
T Consensus 353 g~~~~Gd~vll~~ 365 (379)
T PLN02326 353 GKVKKGDVIATAG 365 (379)
T ss_pred CCCCCCCEEEEEE
Confidence 0112456666665
|
|
| >PRK06840 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=90.93 E-value=0.6 Score=48.49 Aligned_cols=81 Identities=14% Similarity=0.236 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCee--EEEecCCcchHHHHHHHHHHHHHHc
Q 010144 162 DEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIK--AFNLSGMGCSASVVAVDLVQQLFRT 239 (517)
Q Consensus 162 ~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~--~~dl~~mgCsggl~AL~lA~~lL~a 239 (517)
.....++.+++|+++|++++|||.++... .-+..-..++++||++++-. .-+.+++++++.+.+|..+ +++
T Consensus 236 ~~~~~~~i~~~L~~~gl~~~did~~~~h~----~~~~~~~~~~~~Lgl~~~~~~~~~~~Gn~~sas~~~~L~~~---~~~ 308 (339)
T PRK06840 236 IPNFLKVIREALRKSGYTPKDIDYLAILH----MKRSAHIALLEGLGLTEEQAIYLDEYGHLGQLDQILSLHLA---LEQ 308 (339)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECC----cCHHHHHHHHHHcCCCHHHeEeHHhccchhhhhHHHHHHHH---HHc
Confidence 34567899999999999999999987543 12444567899999974321 1245566666666666544 444
Q ss_pred C---CCCEEEEEE
Q 010144 240 Y---KNKLAIVVS 249 (517)
Q Consensus 240 g---~~~~aLVVs 249 (517)
+ +.+++|+++
T Consensus 309 ~~~~~Gd~ill~~ 321 (339)
T PRK06840 309 GKLKDGDLVVLVS 321 (339)
T ss_pred CCCCCCCEEEEEE
Confidence 3 445666665
|
|
| >KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.84 E-value=0.2 Score=50.65 Aligned_cols=94 Identities=15% Similarity=0.218 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHc
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~a 239 (517)
..+++.+|...+|+++.++.+.||.||+.+. ..--+-.++..-+-.-|.+..+++-.+. |+|-+.-.|+...-.||.+
T Consensus 66 phdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agfsdktpahtvt-macissn~amttgmgliat 144 (465)
T KOG1392|consen 66 PHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGFSDKTPAHTVT-MACISSNVAMTTGMGLIAT 144 (465)
T ss_pred hhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHHHHhcCCCCCCccceee-eehhccchhhhccceeEee
Confidence 3577899999999999999999999999864 2333445555555566787778888888 7999999999999999999
Q ss_pred CCCCEEEEEEecCCCC
Q 010144 240 YKNKLAIVVSTESMGP 255 (517)
Q Consensus 240 g~~~~aLVVs~E~~s~ 255 (517)
|..+.++--+.|.+|.
T Consensus 145 g~~dvivaggvelmsd 160 (465)
T KOG1392|consen 145 GNADVIVAGGVELMSD 160 (465)
T ss_pred CCcCEEEEcceeeccc
Confidence 9877766667788775
|
|
| >cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=90.62 E-value=0.89 Score=46.57 Aligned_cols=77 Identities=13% Similarity=0.068 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCC---CeeEEEecCCcchHHHHHHHHHHHHHHc
Q 010144 164 IIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRN---DIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (517)
Q Consensus 164 la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl~~---~~~~~dl~~mgCsggl~AL~lA~~lL~a 239 (517)
-..++++++|+++|++++|||.++... +......-........++.++ ....-+++++++++++..|..+...++.
T Consensus 206 ~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~~ 285 (332)
T cd00825 206 GLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLEH 285 (332)
T ss_pred HHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHHHhc
Confidence 346799999999999999999998763 322222223333444444320 1122366777888888888888777765
Q ss_pred C
Q 010144 240 Y 240 (517)
Q Consensus 240 g 240 (517)
+
T Consensus 286 ~ 286 (332)
T cd00825 286 G 286 (332)
T ss_pred C
Confidence 5
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). |
| >PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=90.58 E-value=0.46 Score=42.57 Aligned_cols=87 Identities=17% Similarity=0.085 Sum_probs=51.1
Q ss_pred hhhCCCCCcccccceeecCCCChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHH---HHHHHHHcCCCCCCCEE
Q 010144 380 AVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWY---VLGYMEAKKRLKKGDRI 456 (517)
Q Consensus 380 ~~~g~~~d~~~did~~~~Hq~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~---~L~~~~~~g~i~~Gd~V 456 (517)
+++|+++ +|||.|=+|-.-....-...+.||++++++.++=-.+ -+||..++|=.. .+.+.++. +.|++.
T Consensus 33 ~~ag~~~---~did~~Ei~EaFA~~~l~~~~~lg~~~~~vN~~GG~l-a~GHP~gasG~r~~~~l~~~L~~---~~~~~g 105 (123)
T PF02803_consen 33 ERAGLTP---DDIDVIEINEAFAAQVLAFLEALGLDPEKVNPNGGAL-ALGHPLGASGARLVVELAHQLRR---RGGRYG 105 (123)
T ss_dssp HHHT--G---GGESEEEE--SBHHHHHHHHHHHTTGGGGBSTT--HH-HH-BHTTTHHHHHHHHHHHHHHH---HTTSEE
T ss_pred HHhCCCc---cccchhhccchhhhHHHHhhccccccccccCcccccc-cccccccccccchhhhhHHHHHH---hchhhh
Confidence 6889996 9999999999988888888999999999986532223 367775555433 34433332 245665
Q ss_pred EEEEechhHHhheeeeE
Q 010144 457 LMISLGAGFKCNNCVWE 473 (517)
Q Consensus 457 lliafG~G~t~~a~vlr 473 (517)
+...-+.|-.-.+++++
T Consensus 106 la~~~~ggG~g~a~lle 122 (123)
T PF02803_consen 106 LAAICAGGGQGSAVLLE 122 (123)
T ss_dssp EEEEEETTTEEEEEEEE
T ss_pred hHHhcccceeeEEEEEE
Confidence 54333333334455554
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C .... |
| >PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=90.23 E-value=0.52 Score=48.32 Aligned_cols=84 Identities=12% Similarity=0.165 Sum_probs=55.4
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEE---EecCCcchHHHHHHHHHHHH
Q 010144 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAF---NLSGMGCSASVVAVDLVQQL 236 (517)
Q Consensus 160 ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~---dl~~mgCsggl~AL~lA~~l 236 (517)
.......++.+++|+++|++++|||.++... ..+..-.++.+.||++++-... +.++++|+..+..|+ ++
T Consensus 216 ~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~----~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~~a~~~~~L~---~~ 288 (319)
T PRK09352 216 FAVRELAKVAREALEAAGLTPEDIDWLVPHQ----ANLRIIDATAKKLGLPMEKVVVTVDKYGNTSAASIPLALD---EA 288 (319)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCCCHHHhhhhHHhhCCHHHHHHHHHHH---HH
Confidence 3445567799999999999999999998753 2345567789999997532222 344455666666664 33
Q ss_pred HHcC---CCCEEEEEEe
Q 010144 237 FRTY---KNKLAIVVST 250 (517)
Q Consensus 237 L~ag---~~~~aLVVs~ 250 (517)
++.+ +.+++|+++.
T Consensus 289 ~~~g~~~~Gd~vll~s~ 305 (319)
T PRK09352 289 VRDGRIKRGDLVLLEGF 305 (319)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 3443 3566776664
|
|
| >PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=90.04 E-value=0.92 Score=46.60 Aligned_cols=84 Identities=6% Similarity=0.098 Sum_probs=56.8
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeE---EEecCCcchHHHHHHHHHHHH
Q 010144 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKA---FNLSGMGCSASVVAVDLVQQL 236 (517)
Q Consensus 160 ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~---~dl~~mgCsggl~AL~lA~~l 236 (517)
.+.....++.+++|+++|++++|||.++... +.+..-..+.++||++.+-.. -+.++++|++.+.+|..+
T Consensus 222 ~~~~~~~~~i~~~L~~~g~~~~did~~~~h~----~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~sas~~~~L~~~--- 294 (325)
T PRK12879 222 WAVRTMPKGARQVLEKAGLTKDDIDWVIPHQ----ANLRIIESLCEKLGIPMEKTLVSVEYYGNTSAATIPLALDLA--- 294 (325)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHcCCCHHHhhhhHhhhCchHHHHHHHHHHHH---
Confidence 3445566788999999999999999988753 235556788999999743221 245555667777677544
Q ss_pred HHcC---CCCEEEEEEe
Q 010144 237 FRTY---KNKLAIVVST 250 (517)
Q Consensus 237 L~ag---~~~~aLVVs~ 250 (517)
++.+ +.+++|+++.
T Consensus 295 ~~~g~~~~Gd~vll~~~ 311 (325)
T PRK12879 295 LEQGKIKPGDTLLLYGF 311 (325)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 4543 3456666663
|
|
| >PRK08242 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=89.53 E-value=0.87 Score=48.92 Aligned_cols=91 Identities=15% Similarity=0.321 Sum_probs=59.0
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecC--------CcchHHHHHHHHHHHHH
Q 010144 166 FDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSG--------MGCSASVVAVDLVQQLF 237 (517)
Q Consensus 166 ~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~--------mgCsggl~AL~lA~~lL 237 (517)
..|++++|+++|++++|||++=++- ..+...-...+.||+.+ ..++++| .|++|....+.++.+|-
T Consensus 303 ~~a~~~al~~AGl~~~DID~~ei~d----aFa~~~l~~~e~lG~~~--~~vN~~GG~la~GHP~GAsG~~~~~~l~~~L~ 376 (402)
T PRK08242 303 VPATRKALAKAGLTVDDIDLFELNE----AFASVVLRFMQALDIPH--DKVNVNGGAIAMGHPLGATGAMILGTVLDELE 376 (402)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecc----hhhHHHHHHHHHhCCCC--cCCCcCCCHHhcCCcHHHHHHHHHHHHHHHHH
Confidence 4699999999999999999886531 23344455678888753 2445544 24555555666666664
Q ss_pred HcCCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEee
Q 010144 238 RTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTN 283 (517)
Q Consensus 238 ~ag~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~ 283 (517)
+.+ .++. +.+.|.-|-.++|+||++
T Consensus 377 ~~~-~~~g--------------------~~~~c~ggG~g~a~~~e~ 401 (402)
T PRK08242 377 RRG-KRTA--------------------LITLCVGGGMGIATIIER 401 (402)
T ss_pred hcC-CCeE--------------------EEEEcccCCceeEEEEEe
Confidence 322 2222 344577788888888875
|
|
| >cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Probab=89.35 E-value=0.94 Score=46.25 Aligned_cols=85 Identities=12% Similarity=0.248 Sum_probs=57.6
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEE---EecCCcchHHHHHHHHHHH
Q 010144 159 SEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAF---NLSGMGCSASVVAVDLVQQ 235 (517)
Q Consensus 159 ~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~---dl~~mgCsggl~AL~lA~~ 235 (517)
+.+.+...++.+++|+++|++++|||.++... +.+..-..+.++||++++-... +.+++++++.+.+|..+
T Consensus 219 ~~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~----~~~~~~~~~~~~lgl~~~~~~~~~~~~Gn~~sas~~~~L~~~-- 292 (320)
T cd00830 219 KFAVRLMPESIEEALEKAGLTPDDIDWFVPHQ----ANLRIIEAVAKRLGLPEEKVVVNLDRYGNTSAASIPLALDEA-- 292 (320)
T ss_pred HHHHHhhHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCCCHHHhhhhHHhhCcHHHHHHHHHHHHH--
Confidence 34456678899999999999999999888754 2345556789999997432222 23455666666666544
Q ss_pred HHHcC---CCCEEEEEEe
Q 010144 236 LFRTY---KNKLAIVVST 250 (517)
Q Consensus 236 lL~ag---~~~~aLVVs~ 250 (517)
++.+ +.+++|+++.
T Consensus 293 -~~~~~~~~G~~vll~~~ 309 (320)
T cd00830 293 -IEEGKLKKGDLVLLLGF 309 (320)
T ss_pred -HHcCCCCCCCEEEEEEE
Confidence 3333 4677887764
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. |
| >PRK09050 beta-ketoadipyl CoA thiolase; Validated | Back alignment and domain information |
|---|
Probab=89.07 E-value=1 Score=48.29 Aligned_cols=94 Identities=20% Similarity=0.248 Sum_probs=58.2
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecCC--------cchHHHHHHHHHHHH
Q 010144 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGM--------GCSASVVAVDLVQQL 236 (517)
Q Consensus 165 a~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~m--------gCsggl~AL~lA~~l 236 (517)
...|++++|+++|++|+|||++-++- ..+...-...+.||+.+.-..++.++. |++|....++++.+|
T Consensus 299 ~~~a~~~al~~Agl~~~DId~~ei~D----~f~~~~l~~~e~lg~~~~~~pvN~~GG~la~Ghp~gasG~~~~~e~~~qL 374 (401)
T PRK09050 299 PAPATRKLLARLGLTIDQFDVIELNE----AFAAQGLAVLRQLGLADDDARVNPNGGAIALGHPLGMSGARLVLTALHQL 374 (401)
T ss_pred HHHHHHHHHHHcCCCHHHCCccccCc----HhHHHHHHHHHHcCCCCCCCCEeCCCchHhcCCchhHHHHHHHHHHHHHH
Confidence 36799999999999999999886331 233444556788898533345666651 344444556666666
Q ss_pred HHcCCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEee
Q 010144 237 FRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTN 283 (517)
Q Consensus 237 L~ag~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~ 283 (517)
-..+ .++. +++.|.-|-.++|+||++
T Consensus 375 r~~~-~~~g--------------------~~~~c~~gG~g~a~~~e~ 400 (401)
T PRK09050 375 ERTG-GRYA--------------------LCTMCIGVGQGIALAIER 400 (401)
T ss_pred HhcC-CCeE--------------------EEEEcccccceeEEEEEe
Confidence 4322 2232 333566677777777764
|
|
| >CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Probab=88.90 E-value=1.1 Score=46.21 Aligned_cols=82 Identities=13% Similarity=0.172 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEE---EecCCcchHHHHHHHHHHHHH
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAF---NLSGMGCSASVVAVDLVQQLF 237 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~---dl~~mgCsggl~AL~lA~~lL 237 (517)
+......+++++|+++|++++|||.+++... -+.....+.++||++++-... +.++++|++...+|..+ +
T Consensus 224 ~~~~~~~~i~~~L~~~g~~~~did~~~~hq~----~~~~~~~~~~~lgl~~~k~~~~l~~~Gn~~sasi~~~L~~~---~ 296 (326)
T CHL00203 224 AVFQVPAVIIKCLNALNISIDEVDWFILHQA----NKRILEAIANRLSVPNSKMITNLEKYGNTSAASIPLALDEA---I 296 (326)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHhhhHHHhhCcHHHHHHHHHHHHH---H
Confidence 3345677889999999999999999887642 234556789999998443222 34556666667777655 3
Q ss_pred HcC---CCCEEEEEE
Q 010144 238 RTY---KNKLAIVVS 249 (517)
Q Consensus 238 ~ag---~~~~aLVVs 249 (517)
+.+ +.+++|+++
T Consensus 297 ~~g~~~~Gd~vll~~ 311 (326)
T CHL00203 297 QNNKIQPGQIIVLSG 311 (326)
T ss_pred HhCCCCCCCEEEEEE
Confidence 443 456666665
|
|
| >COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=88.54 E-value=2.1 Score=45.40 Aligned_cols=94 Identities=12% Similarity=0.190 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCC-----CCeeEE-EecCCcchHHHHHHHHHHH
Q 010144 162 DEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLR-----NDIKAF-NLSGMGCSASVVAVDLVQQ 235 (517)
Q Consensus 162 ~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~-----~~~~~~-dl~~mgCsggl~AL~lA~~ 235 (517)
..-...|+++.+++.|.+|+|.|.+++.+ |.|-+....+..+|.+ +..... .++++.|.+...+|- .-
T Consensus 208 ~~~~~~a~~~~~~k~gls~~dfdy~vfH~----P~~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~La--s~ 281 (377)
T COG3425 208 FKHVENAAKGYMEKTGLSPDDFDYIVFHQ----PNGKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLA--SL 281 (377)
T ss_pred HHHHHHHHHHHHHHhCCChhhhCeEEecC----CCCchHHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHHH--HH
Confidence 34567899999999999999999998865 4566667777777765 333333 688889998886653 33
Q ss_pred HHHcC-CCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEee
Q 010144 236 LFRTY-KNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTN 283 (517)
Q Consensus 236 lL~ag-~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~ 283 (517)
|=++. +.+++|+++ ||.||+|-..+-
T Consensus 282 L~~a~~~G~rIl~~S----------------------YGSGa~s~~fs~ 308 (377)
T COG3425 282 LDNAKLPGDRILLFS----------------------YGSGAGSEAFSI 308 (377)
T ss_pred HhhcCCCCCEEEEEe----------------------eCCCcceeEEEE
Confidence 33333 556777665 577887766653
|
|
| >cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=88.34 E-value=2 Score=42.05 Aligned_cols=76 Identities=11% Similarity=0.053 Sum_probs=45.6
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCC---CCeeEEEecCCcchHHHHHHHHHHHHHHcC
Q 010144 165 IFDTLDKLFARTDISPSEIDVLVVN-VSLFSPAPSLTSRIINRYNLR---NDIKAFNLSGMGCSASVVAVDLVQQLFRTY 240 (517)
Q Consensus 165 a~~Aa~~aL~~agi~p~dID~LI~a-~s~~~~~Ps~a~~I~~~LGl~---~~~~~~dl~~mgCsggl~AL~lA~~lL~ag 240 (517)
..++++++|+++|++++|||.++.. +.................+.. .....-.++++++++++..|..+...++.+
T Consensus 147 ~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~ 226 (254)
T cd00327 147 LARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLEHE 226 (254)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHhCC
Confidence 5788999999999999999998764 322222222222222333331 112234556667777777776666655554
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. |
| >PTZ00455 3-ketoacyl-CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=88.26 E-value=4.8 Score=43.77 Aligned_cols=34 Identities=12% Similarity=-0.022 Sum_probs=29.2
Q ss_pred hhhCCCCCcccccceeecCCCChHHHHHHHhhCCCCc
Q 010144 380 AVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDE 416 (517)
Q Consensus 380 ~~~g~~~d~~~did~~~~Hq~~~~il~~i~~~Lgl~~ 416 (517)
+++|++| +|||.+=+|-.-....-...+.||+.+
T Consensus 320 ~~AGl~~---~DiD~~Ei~daFa~~~l~~~e~lGl~~ 353 (438)
T PTZ00455 320 SMAGVKP---SDLQVAEVHDCFTIAELLMYEALGIAE 353 (438)
T ss_pred HHcCCCH---HHCcEeeecccChHHHHHHHHHcCCCC
Confidence 6889996 899999999887777677789999987
|
|
| >PRK13359 beta-ketoadipyl CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=88.06 E-value=1.3 Score=47.51 Aligned_cols=94 Identities=21% Similarity=0.264 Sum_probs=59.3
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecCC--------cchHHHHHHHHHHHH
Q 010144 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGM--------GCSASVVAVDLVQQL 236 (517)
Q Consensus 165 a~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~m--------gCsggl~AL~lA~~l 236 (517)
...|++++|+++|++|+|||++-++ .......-...+.||+.+.-..++.++. |++|+...++++.+|
T Consensus 298 ~~~A~~~al~~AGl~~~DID~iei~----dafa~~~l~~~e~lg~~~~~~pvN~~GG~la~GHp~gasG~~~v~e~~~qL 373 (400)
T PRK13359 298 PAPATQKLLARLGMTLDQFDVIELN----EAFASQGLAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVTTALYQL 373 (400)
T ss_pred HHHHHHHHHHHhCCCHHHcCcCccC----cHhHHHHHHHHHHcCCCCCCCCEECCCchhhcCCchhHHHHHHHHHHHHHH
Confidence 3689999999999999999988632 1223444556788887433345666651 345555556666666
Q ss_pred HHcCCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEee
Q 010144 237 FRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTN 283 (517)
Q Consensus 237 L~ag~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~ 283 (517)
-.. ..++. +.+.|.-|..+.|+||++
T Consensus 374 ~~~-~~~~g--------------------~~~~c~~gG~g~a~~ie~ 399 (400)
T PRK13359 374 ERT-GGRFA--------------------LCTMCIGVGQGIAIAIER 399 (400)
T ss_pred hhc-CCCeE--------------------EEEEcccCCceeEEEEEe
Confidence 432 22333 333566677778888875
|
|
| >PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=87.83 E-value=1.2 Score=47.07 Aligned_cols=86 Identities=9% Similarity=0.143 Sum_probs=56.6
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHH-cCCCC-Ce----eEEEecCCcchHHHHHHHH
Q 010144 159 SEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINR-YNLRN-DI----KAFNLSGMGCSASVVAVDL 232 (517)
Q Consensus 159 ~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~-LGl~~-~~----~~~dl~~mgCsggl~AL~l 232 (517)
+++.+.+.++.+++|+++|++++|||.++..... +.+-..+.++ ||+.. .- .--+.++++|++...+|+.
T Consensus 267 ~~~~~~~~~~i~~~L~~~gl~~~dId~~~~Hq~~----~~~~d~~~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~~ 342 (372)
T PRK07515 267 KEVCPMVAEHIVEHLAENGLTPADVKRFWLHQAN----INMNQLIGKKVLGRDATPEEAPVILDEYANTSSAGSIIAFHK 342 (372)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHhccCCCChhhceEeHHhcCCchhhHHHHHHHH
Confidence 4567778899999999999999999999875321 1222334555 56431 11 1235677788888888887
Q ss_pred HHHHHHcCCCCEEEEEEe
Q 010144 233 VQQLFRTYKNKLAIVVST 250 (517)
Q Consensus 233 A~~lL~ag~~~~aLVVs~ 250 (517)
+..-+ .+.+++|+++.
T Consensus 343 ~~~~~--~~Gd~vll~~~ 358 (372)
T PRK07515 343 HSDDL--AAGDLGVICSF 358 (372)
T ss_pred HhccC--CCCCEEEEEEe
Confidence 75432 34566766653
|
|
| >PRK08170 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=87.24 E-value=2.5 Score=45.70 Aligned_cols=87 Identities=16% Similarity=0.129 Sum_probs=45.2
Q ss_pred hhhCCCCCcccccceeecCCCCh-HHHHHHH--hhCC--------------CCcccchhhhhcccCcccchhhHH---HH
Q 010144 380 AVLGAGLNLKAGIEHFCLHPGGR-AVIDGTG--KGLE--------------LDEYDLEPARMALHRFGNTSAGGL---WY 439 (517)
Q Consensus 380 ~~~g~~~d~~~did~~~~Hq~~~-~il~~i~--~~Lg--------------l~~e~~~~S~~~l~~~GNtsSASi---~~ 439 (517)
+++|++| +|||.+-+|-.-. ..+-.+. +.+| ++.+++.++= -.--+||...||= ..
T Consensus 318 ~~aGl~~---~did~~ei~daFa~~~l~~l~~le~lGf~~~G~g~~~~~G~~~~~pvN~~G-G~la~GHP~GAtG~~~~~ 393 (426)
T PRK08170 318 QRHGLTL---EDLDLWEINEAFAAQVLACLAAWADEEYCREQLGLDGALGELDRERLNVDG-GAIALGHPVGASGARIVL 393 (426)
T ss_pred HHcCCCH---HHcCEEEecchhHHHHHHHHHHhccccchhcccccccccCCCCcceecCCC-CHHHhCCCccCccHHHHH
Confidence 6889996 8999999997643 3332221 2232 3333443211 1233677766555 66
Q ss_pred HHHHHHHcCCCCCCCEEEE-EEechhHHhheeeeEE
Q 010144 440 VLGYMEAKKRLKKGDRILM-ISLGAGFKCNNCVWEV 474 (517)
Q Consensus 440 ~L~~~~~~g~i~~Gd~Vll-iafG~G~t~~a~vlr~ 474 (517)
.|.+.++. ..|.+.+. +..|.|. -.+++++.
T Consensus 394 ~l~~~l~~---~~~~~g~~~~c~~gg~-g~a~~~e~ 425 (426)
T PRK08170 394 HLLHALKR---RGTKRGIAAICIGGGQ-GGAMLLER 425 (426)
T ss_pred HHHHHHHh---hCCCeEEEEEecCCCh-hheEEEEe
Confidence 66666653 23334332 3333333 34555543
|
|
| >PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=86.48 E-value=3.8 Score=40.59 Aligned_cols=88 Identities=14% Similarity=0.070 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCC----CChHHHHHHHhhCCCCcccchhhhhcccCcccchh
Q 010144 359 YVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHP----GGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSA 434 (517)
Q Consensus 359 ~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq----~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsS 434 (517)
.+..+..+...++| ++.|..+ +||+|+++-. ..+.+--.+.+.||++++-- |.-+.-.|--++
T Consensus 99 ~a~~L~~~Aa~~AL-------~~~g~~~---~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~---R~~i~~~GC~gg 165 (226)
T PF00195_consen 99 EAPPLAEEAARKAL-------AEAGLDP---SDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQ---RTPIFGMGCAGG 165 (226)
T ss_dssp HHHHHHHHHHHHHH-------HHHTS-G---GGECEEEEEESSSSECS-HHHHHHHHHT--TTSE---EEEEES-GGGHH
T ss_pred HHHHHHHHHHHHHH-------HHcCCCC---cccceEEEEecCCcCCCchhHHHHhcCCCCCCcE---EEEEeccchhhH
Confidence 34455566677777 7889885 9999999732 34556668999999998744 566777777766
Q ss_pred hHHHHHHHHHHHcCCCCCCCEEEEEEec
Q 010144 435 GGLWYVLGYMEAKKRLKKGDRILMISLG 462 (517)
Q Consensus 435 ASi~~~L~~~~~~g~i~~Gd~VlliafG 462 (517)
.+.+-.-.+..+. .||.+|++++.-
T Consensus 166 ~~~L~~A~~~~~~---~p~a~VLvv~vE 190 (226)
T PF00195_consen 166 AAGLRRAKDIARA---NPGARVLVVCVE 190 (226)
T ss_dssp HHHHHHHHHHHHH---STT-EEEEEEEE
T ss_pred HHHHHHHHHHHhC---CccceEEEEEEE
Confidence 6665433344333 489999998865
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A .... |
| >PRK09052 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=86.36 E-value=1.6 Score=46.83 Aligned_cols=92 Identities=15% Similarity=0.259 Sum_probs=56.8
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecC--------CcchHHHHHHHHHHHH
Q 010144 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSG--------MGCSASVVAVDLVQQL 236 (517)
Q Consensus 165 a~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~--------mgCsggl~AL~lA~~l 236 (517)
...|+++||+++|++|+|||++-++ .......-...+.||+.+ ..+|.++ .|++|....+.++.+|
T Consensus 299 ~~~A~~~al~~Agi~~~did~~ei~----D~f~~~~l~~~e~lg~~~--~~vN~~GG~la~GHp~gasG~~~~~~~~~~L 372 (399)
T PRK09052 299 PIEAIPAALKQAGLKQDDLDWIELN----EAFAAQSLAVIRDLGLDP--SKVNPLGGAIALGHPLGATGAIRTATVVHGL 372 (399)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEeC----cHHHHHHHHHHHHhCCCC--cccCCCCchhhcCchHHHHHHHHHHHHHHHH
Confidence 4689999999999999999988632 122344455567788752 2233333 1555556666666666
Q ss_pred HHcCCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEee
Q 010144 237 FRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTN 283 (517)
Q Consensus 237 L~ag~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~ 283 (517)
-..+ .++. +.+.|.-|-.++|+||++
T Consensus 373 ~~~~-~~~g--------------------~~~~c~~gg~g~a~~~e~ 398 (399)
T PRK09052 373 RRTN-LKYG--------------------MVTMCVGTGMGAAGIFER 398 (399)
T ss_pred HhcC-CCeE--------------------EEEEcccCCceeEEEEEe
Confidence 4432 2222 333566677778888764
|
|
| >PRK07850 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=86.00 E-value=3.9 Score=43.65 Aligned_cols=91 Identities=13% Similarity=0.186 Sum_probs=57.8
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCCCeeEEEecC--------CcchHHHHHHHHHHH
Q 010144 165 IFDTLDKLFARTDISPSEIDVLVVN-VSLFSPAPSLTSRIINRYNLRNDIKAFNLSG--------MGCSASVVAVDLVQQ 235 (517)
Q Consensus 165 a~~Aa~~aL~~agi~p~dID~LI~a-~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~--------mgCsggl~AL~lA~~ 235 (517)
...|++++++++|++|+|||++=+. + .+...-+..+.||+.. ..+|.+| .||+|....++++.+
T Consensus 287 ~~~a~~~al~~agl~~~did~~ei~d~-----F~~~~l~~~e~lg~~~--~pvN~~GG~la~Ghp~gatG~~~v~e~~~q 359 (387)
T PRK07850 287 PVQATAKVLEKAGMKIGDIDLVEINEA-----FASVVLSWAQVHEPDM--DKVNVNGGAIALGHPVGSTGARLITTALHE 359 (387)
T ss_pred HHHHHHHHHHHcCCCHHHcCeeeeccc-----chHHHHHHHHHcCCCC--CCcCCCCchhhcCCCcchhHHHHHHHHHHH
Confidence 4689999999999999999988654 3 2233334447777643 2455544 144555566666666
Q ss_pred HHHcCCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEee
Q 010144 236 LFRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTN 283 (517)
Q Consensus 236 lL~ag~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~ 283 (517)
|-+.+ .++. +++.|.-|..++|++|++
T Consensus 360 L~~~~-~~~g--------------------~~~~c~~gg~g~a~~~e~ 386 (387)
T PRK07850 360 LERTD-KSTA--------------------LITMCAGGALSTGTIIER 386 (387)
T ss_pred HHhcC-CCeE--------------------EEEEccccCceeEEEEEe
Confidence 65432 2333 333566777788888875
|
|
| >TIGR02430 pcaF beta-ketoadipyl CoA thiolase | Back alignment and domain information |
|---|
Probab=85.99 E-value=1.6 Score=46.87 Aligned_cols=70 Identities=24% Similarity=0.337 Sum_probs=46.1
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecCC--------cchHHHHHHHHHHHH
Q 010144 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGM--------GCSASVVAVDLVQQL 236 (517)
Q Consensus 165 a~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~m--------gCsggl~AL~lA~~l 236 (517)
...|++++|+++|++|+|||++-+. ...+...-...+.||+.++-..++.++- |++|....++++.+|
T Consensus 298 ~~~a~~~al~~Agl~~~DID~~ei~----D~f~~~~l~~~e~lG~~~~~~pvN~~GG~la~GHp~gasG~~~~~e~~~qL 373 (400)
T TIGR02430 298 PVPATQKLLARAGLSIDQFDVIELN----EAFAAQALAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVLTALRQL 373 (400)
T ss_pred HHHHHHHHHHHhCCCHHHCCCcccC----cHHHHHHHHHHHHcCCCCCCCeECCCCchHhccChHHHHHHHHHHHHHHHH
Confidence 3679999999999999999987532 1233445566788998543345666651 344555556666666
Q ss_pred HH
Q 010144 237 FR 238 (517)
Q Consensus 237 L~ 238 (517)
-.
T Consensus 374 r~ 375 (400)
T TIGR02430 374 ER 375 (400)
T ss_pred Hh
Confidence 43
|
Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid. |
| >PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=85.68 E-value=1.5 Score=39.34 Aligned_cols=92 Identities=22% Similarity=0.334 Sum_probs=57.1
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecC--------CcchHHHHHHHHHHHH
Q 010144 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSG--------MGCSASVVAVDLVQQL 236 (517)
Q Consensus 165 a~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~--------mgCsggl~AL~lA~~l 236 (517)
...|++++|+++|++++|||.+=++- .+-...-...+.||+.+ ..+|.+| .||+|....++++.+|
T Consensus 24 p~~A~~~al~~ag~~~~did~~Ei~E----aFA~~~l~~~~~lg~~~--~~vN~~GG~la~GHP~gasG~r~~~~l~~~L 97 (123)
T PF02803_consen 24 PVPAARKALERAGLTPDDIDVIEINE----AFAAQVLAFLEALGLDP--EKVNPNGGALALGHPLGASGARLVVELAHQL 97 (123)
T ss_dssp HHHHHHHHHHHHT--GGGESEEEE------SBHHHHHHHHHHHTTGG--GGBSTT--HHHH-BHTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCccccchhhccc----hhhhHHHHhhccccccc--cccCcccccccccccccccccchhhhhHHHH
Confidence 46799999999999999999886652 12233445566777653 2333333 3778888888888888
Q ss_pred HHcCCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEee
Q 010144 237 FRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTN 283 (517)
Q Consensus 237 L~ag~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~ 283 (517)
-..+ .++.| .+.|.-|-.+.|+||++
T Consensus 98 ~~~~-~~~gl--------------------a~~~~ggG~g~a~ller 123 (123)
T PF02803_consen 98 RRRG-GRYGL--------------------AAICAGGGQGSAVLLER 123 (123)
T ss_dssp HHHT-TSEEE--------------------EEEEETTTEEEEEEEEE
T ss_pred HHhc-hhhhh--------------------HHhcccceeeEEEEEEC
Confidence 6653 23322 23455566677777764
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C .... |
| >PRK06205 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=85.15 E-value=1.6 Score=46.80 Aligned_cols=94 Identities=15% Similarity=0.310 Sum_probs=55.9
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCC-eeEEEecC--------CcchHHHHHHHHHHH
Q 010144 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRND-IKAFNLSG--------MGCSASVVAVDLVQQ 235 (517)
Q Consensus 165 a~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~-~~~~dl~~--------mgCsggl~AL~lA~~ 235 (517)
...|++++|+++|++|+|||++-+.- ..+...-+..+.||+.++ ...++.+| .|++|...-++++.+
T Consensus 300 ~~~a~~~al~~Agl~~~Did~~ei~d----~f~~~~l~~~e~lg~~~~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~q 375 (404)
T PRK06205 300 PVPATEKALARAGLTLDDIDLIELNE----AFAAQVLAVLKEWGFGADDEERLNVNGSGISLGHPVGATGGRILATLLRE 375 (404)
T ss_pred HHHHHHHHHHHcCCCHHHCCEeeecc----HHHHHHHHHHHHhCcCcccCCCcCCCCCHHhhCCChhhhHHHHHHHHHHH
Confidence 36799999999999999999886431 123334445567776531 01255554 134444444555555
Q ss_pred HHHcCCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEee
Q 010144 236 LFRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTN 283 (517)
Q Consensus 236 lL~ag~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~ 283 (517)
|-..+ .++. +.+.|.-|..+.|+||++
T Consensus 376 L~~~~-~~~g--------------------l~~~c~~gg~g~a~~~e~ 402 (404)
T PRK06205 376 LQRRQ-ARYG--------------------LETMCIGGGQGLAAVFER 402 (404)
T ss_pred HHhcC-CCeE--------------------EEEEeccCChhhEEEEEe
Confidence 54321 2222 344577778888888875
|
|
| >cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=85.06 E-value=3.5 Score=44.11 Aligned_cols=61 Identities=15% Similarity=0.092 Sum_probs=41.0
Q ss_pred hhhCCCCCcccccceeecCCCChHHHHHHHhhCCCCc------------------ccchhhhhcccCcccchhhHHHHHH
Q 010144 380 AVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDE------------------YDLEPARMALHRFGNTSAGGLWYVL 441 (517)
Q Consensus 380 ~~~g~~~d~~~did~~~~Hq~~~~il~~i~~~Lgl~~------------------e~~~~S~~~l~~~GNtsSASi~~~L 441 (517)
+++|++| +|||.+=+|-.-...--...+.||+.+ ..+.+| --+--+||...||=...+
T Consensus 280 ~~Agi~~---~DID~~Ei~d~Fa~~~l~~~e~lgl~~~g~~~~~~~~g~~~~~G~~pvN~~-GG~la~GhP~gAtG~~~~ 355 (393)
T cd00826 280 EKAGLGI---GDLDLIEAHDAFAANACATNEALGLCPEGQGGALVDRGDNTYGGKSIINPN-GGAIAIGHPIGASGAAIC 355 (393)
T ss_pred HHcCCCH---HHcCeeehhhhhHHHHHHHHHHhCCCcccchhhhhhcCccccCCcceECCC-CchhhcCCCccccHHHHH
Confidence 6889986 899999999887666666778899876 333221 112347888766655544
Q ss_pred HHH
Q 010144 442 GYM 444 (517)
Q Consensus 442 ~~~ 444 (517)
.++
T Consensus 356 ~e~ 358 (393)
T cd00826 356 AEL 358 (393)
T ss_pred HHH
Confidence 443
|
There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK06954 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=84.71 E-value=1.6 Score=46.77 Aligned_cols=92 Identities=20% Similarity=0.244 Sum_probs=54.7
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecC--------CcchHHHHHHHHHHHH
Q 010144 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSG--------MGCSASVVAVDLVQQL 236 (517)
Q Consensus 165 a~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~--------mgCsggl~AL~lA~~l 236 (517)
...|++++|+++|++|+|||++=+.- ......-.-.+.||+.+ ..++++| .|++|....++++.+|
T Consensus 297 ~~~a~~~al~~agl~~~Did~~ei~d----~fa~~~l~~~e~lg~~~--~~vN~~GG~~a~Ghp~gasG~~~~~~~~~qL 370 (397)
T PRK06954 297 PVGAIRKLFEKNGWRAAEVDLFEINE----AFAVVTMAAMKEHGLPH--EKVNVNGGACALGHPIGASGARILVTLIGAL 370 (397)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEehhh----HHHHHHHHHHHHhCCCc--ccCCcCCChHHhcccHHHHHHHHHHHHHHHH
Confidence 36799999999999999999884321 01112222346777653 3444444 1455555566666665
Q ss_pred HHcCCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEee
Q 010144 237 FRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTN 283 (517)
Q Consensus 237 L~ag~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~ 283 (517)
-..+ .++ .+.+.|.-|-.++|+||+.
T Consensus 371 ~~~~-g~~--------------------~v~~~c~~gg~g~a~~~e~ 396 (397)
T PRK06954 371 RARG-GKR--------------------GVASLCIGGGEATAMGIEL 396 (397)
T ss_pred HhcC-CCe--------------------EEEEEccccchhhEEEEEe
Confidence 4321 122 2344677777788888764
|
|
| >PRK07855 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=84.37 E-value=10 Score=40.55 Aligned_cols=88 Identities=11% Similarity=-0.101 Sum_probs=50.9
Q ss_pred hhhCCCCCcccccceeecCCCChHHHHHHHhhCCCCccc----------chh--h-hhc----ccCcccchhhHHHHHHH
Q 010144 380 AVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYD----------LEP--A-RMA----LHRFGNTSAGGLWYVLG 442 (517)
Q Consensus 380 ~~~g~~~d~~~did~~~~Hq~~~~il~~i~~~Lgl~~e~----------~~~--S-~~~----l~~~GNtsSASi~~~L~ 442 (517)
+++|++| +|||.+=+|-.-...--...|.||+.+.- +.. . +.| +.-.||..+.....++.
T Consensus 277 ~~AGi~~---~DiDv~El~D~Ft~~~l~~~E~lG~~~~Ge~~~~v~~G~~~~~G~lPvN~sGGll~~gh~~G~~~i~E~~ 353 (386)
T PRK07855 277 AQSGLGP---ADIDTAILYDHFTPFVLMQLEELGFCGRGEAKDFIADGALELGGRLPINTHGGQLGEAYIHGMNGIAEAV 353 (386)
T ss_pred HHcCCCH---HHCcEEEeccCCcHHHHHHHHHcCCCCCCcHHHHHHCCCcccCCcccccCCCcccccCchhhHHHHHHHH
Confidence 6889986 89999999987666666667888887541 100 0 111 22256665555555555
Q ss_pred HHHHc---CCCCCCCEEEEEEechhHHhheee
Q 010144 443 YMEAK---KRLKKGDRILMISLGAGFKCNNCV 471 (517)
Q Consensus 443 ~~~~~---g~i~~Gd~VlliafG~G~t~~a~v 471 (517)
..++. .+++..++.+..+.|..+ -++++
T Consensus 354 ~QLrG~a~~QV~~a~~gl~~~~Gg~~-~~~~~ 384 (386)
T PRK07855 354 RQLRGTSVNQVPGVENVLVTAGTGVP-TSGLI 384 (386)
T ss_pred HHHhCCCcccCCCCcEEEEECCCCcc-ceeEE
Confidence 44441 134445566666666433 34444
|
|
| >PRK09051 beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Probab=84.25 E-value=2.2 Score=45.72 Aligned_cols=92 Identities=15% Similarity=0.287 Sum_probs=57.7
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecC--------CcchHHHHHHHHHHHH
Q 010144 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSG--------MGCSASVVAVDLVQQL 236 (517)
Q Consensus 165 a~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~--------mgCsggl~AL~lA~~l 236 (517)
...|++++|+++|++|+|||++=+.- ..+...-...+.||+.+ ..+|.++ .|++|....+.++.+|
T Consensus 294 ~~~a~~~al~~agi~~~did~~ei~d----~f~~~~~~~~e~lg~~~--~~vN~~GG~~a~Ghp~gAsG~~~~~~~~~~L 367 (394)
T PRK09051 294 PVPATQKALERAGLTVADLDVIEANE----AFAAQACAVTRELGLDP--AKVNPNGSGISLGHPVGATGAIITVKALYEL 367 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecC----ccHHHHHHHHHHhCCCc--cccCCCccHHHhcchHHHHHHHHHHHHHHHH
Confidence 46799999999999999999886531 23455566778899853 4555555 1334444555555555
Q ss_pred HHcCCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEee
Q 010144 237 FRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTN 283 (517)
Q Consensus 237 L~ag~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~ 283 (517)
-+.+ .++. +.+.|.-|-.++|+||++
T Consensus 368 ~~~~-~~~g--------------------~~~~c~~gG~g~a~~~e~ 393 (394)
T PRK09051 368 QRIG-GRYA--------------------LVTMCIGGGQGIAAIFER 393 (394)
T ss_pred HhcC-CCEE--------------------EEEEccccChhhEEEEEe
Confidence 4322 2222 333566677777777764
|
|
| >PRK06690 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=84.07 E-value=3.3 Score=43.92 Aligned_cols=69 Identities=17% Similarity=0.243 Sum_probs=47.8
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEec--------CCcchHHHHHHHHHHHH
Q 010144 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLS--------GMGCSASVVAVDLVQQL 236 (517)
Q Consensus 165 a~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~--------~mgCsggl~AL~lA~~l 236 (517)
...|++++|+++|++|+|||++...- ......-...+.||+.+ ..++.+ -.|++|......+..++
T Consensus 260 ~~~a~~~al~~Agl~~~Did~~ei~e----afa~~~~~~~e~lgl~~--~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql 333 (361)
T PRK06690 260 PIFAVNKLLNEMNMKVEDIDYFEINE----AFASKVVACAKELQIPY--EKLNVNGGAIALGHPYGASGAMLVTRLFYQA 333 (361)
T ss_pred HHHHHHHHHHHcCCCHHHcCEeeecc----hhHHHHHHHHHhcCCCc--hhcccCCcHHhccCchhhhHHHHHHHHHHHH
Confidence 57799999999999999999986642 12344455667888753 233333 13777777777777777
Q ss_pred HHc
Q 010144 237 FRT 239 (517)
Q Consensus 237 L~a 239 (517)
-+.
T Consensus 334 ~~~ 336 (361)
T PRK06690 334 KRE 336 (361)
T ss_pred HHh
Confidence 554
|
|
| >PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated | Back alignment and domain information |
|---|
Probab=84.06 E-value=2.2 Score=44.87 Aligned_cols=87 Identities=7% Similarity=0.058 Sum_probs=49.6
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCC-CC--e--eEEEecCCcchHHHHHHHHHHHHHH
Q 010144 165 IFDTLDKLFARTDISPSEIDVLVVN-VSLFSPAPSLTSRIINRYNLR-ND--I--KAFNLSGMGCSASVVAVDLVQQLFR 238 (517)
Q Consensus 165 a~~Aa~~aL~~agi~p~dID~LI~a-~s~~~~~Ps~a~~I~~~LGl~-~~--~--~~~dl~~mgCsggl~AL~lA~~lL~ 238 (517)
..++.+++|+++|++|+|||.|+.. +...+.....+..+.+-+|-. .. + +.-.++..+.+++...+-.+...++
T Consensus 236 l~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~ 315 (348)
T PRK06147 236 LTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAASR 315 (348)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999998864 322121222233444444421 11 1 1222333344445445555555555
Q ss_pred cC--CCCEEEEEEec
Q 010144 239 TY--KNKLAIVVSTE 251 (517)
Q Consensus 239 ag--~~~~aLVVs~E 251 (517)
.+ +..++||.+++
T Consensus 316 ~g~~~g~~~L~~s~~ 330 (348)
T PRK06147 316 KGYGPGPNVLCHLSD 330 (348)
T ss_pred cCcCCCCcEEEEecC
Confidence 65 45788888754
|
|
| >PRK08257 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=84.00 E-value=2.5 Score=46.73 Aligned_cols=78 Identities=15% Similarity=0.214 Sum_probs=49.6
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEE-eecCCCCCCcHHHHHHHHcCCCCC-eeEEEecCCcchH--------HHHHHHHHHH
Q 010144 166 FDTLDKLFARTDISPSEIDVLVV-NVSLFSPAPSLTSRIINRYNLRND-IKAFNLSGMGCSA--------SVVAVDLVQQ 235 (517)
Q Consensus 166 ~~Aa~~aL~~agi~p~dID~LI~-a~s~~~~~Ps~a~~I~~~LGl~~~-~~~~dl~~mgCsg--------gl~AL~lA~~ 235 (517)
..|+++|++.+|++++|||++=+ .| .|...-+..+.||+.++ -..++++| |.-+ ++.++--+..
T Consensus 295 ~~aa~~a~~~AGi~~~Did~~elydc-----F~~~~~~~~E~LGl~~~g~~pvN~sG-Gl~s~G~P~~a~g~~~i~E~v~ 368 (498)
T PRK08257 295 RAAGRRALALAGLGIDDIDAFDLYSC-----FPSAVQVAARELGLDLDDPRPLTVTG-GLPFFGGPGNNYVTHAIAEMVE 368 (498)
T ss_pred HHHHHHHHHHhCCCHHHCCEEEeccC-----CHHHHHHHHHHcCcCCCCCCCcCCCc-ChhhcCCchhhHHHHHHHHHHH
Confidence 56999999999999999998844 45 34555666789998743 13566655 4432 3444443444
Q ss_pred HHHcCCCCEEEEEE
Q 010144 236 LFRTYKNKLAIVVS 249 (517)
Q Consensus 236 lL~ag~~~~aLVVs 249 (517)
.|+..+.+++|+.+
T Consensus 369 QLRg~~~~~gLv~~ 382 (498)
T PRK08257 369 RLRANPGRRGLVTA 382 (498)
T ss_pred HHhhcCCCEEEEEC
Confidence 44444456666654
|
|
| >cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs | Back alignment and domain information |
|---|
Probab=83.90 E-value=2.1 Score=44.89 Aligned_cols=88 Identities=13% Similarity=0.138 Sum_probs=59.7
Q ss_pred hhHHHHHHHHHHHHHHhC--CCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCe------eEEEecCCcchHHHHHH
Q 010144 159 SEMDEIIFDTLDKLFART--DISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDI------KAFNLSGMGCSASVVAV 230 (517)
Q Consensus 159 ~ea~~la~~Aa~~aL~~a--gi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~------~~~dl~~mgCsggl~AL 230 (517)
+.+.....++++++|+++ |++++|||.+++... .+..-..+.++||++++- ..-+.+++++++...+|
T Consensus 255 ~~~~~~~~~~i~~~L~~~~~g~~~~did~~~~H~~----~~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L 330 (361)
T cd00831 255 RLVEKNLERVLRKLLARLGIGLFKLAFDHWCVHPG----GRAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVL 330 (361)
T ss_pred HHHHHHHHHHHHHHhccccCCCccccceEEEECCC----ChHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHH
Confidence 344556777899999999 999999998887542 224445688899987432 23467778888888888
Q ss_pred HHHHHHHHcCCCCEEEEEEe
Q 010144 231 DLVQQLFRTYKNKLAIVVST 250 (517)
Q Consensus 231 ~lA~~lL~ag~~~~aLVVs~ 250 (517)
+.+.+-=+-.+.+++|+++.
T Consensus 331 ~~~~~~g~~~~Gd~vll~~~ 350 (361)
T cd00831 331 AYMEAKGRVKRGDRGLLIAF 350 (361)
T ss_pred HHHHHhCCCCCCCEEEEEEE
Confidence 76643211124566776663
|
PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions. |
| >PRK05656 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=83.86 E-value=2.4 Score=45.26 Aligned_cols=93 Identities=15% Similarity=0.243 Sum_probs=55.8
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecC--------CcchHHHHHHHHHHHH
Q 010144 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSG--------MGCSASVVAVDLVQQL 236 (517)
Q Consensus 165 a~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~--------mgCsggl~AL~lA~~l 236 (517)
...|++++|+++|++|+|||++-+.- ..+...-...+.||+.. ..+++++ .|++|....++++.++
T Consensus 293 ~~~a~~~al~~agl~~~dId~~e~~d----~f~~~~~~~~e~lg~~~--~~vn~~Gg~~a~GHp~gAsG~~~~~~l~~~l 366 (393)
T PRK05656 293 PVSATRRCLDKAGWSLAELDLIEANE----AFAAQSLAVGKELGWDA--AKVNVNGGAIALGHPIGASGCRVLVTLLHEM 366 (393)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecC----ccHHHHHHHHHHhCCCC--ccCCcCCCHHHhCccHHHHHHHHHHHHHHHH
Confidence 35799999999999999999986531 13344556678888742 2334443 1334444444444443
Q ss_pred HHcCCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeec
Q 010144 237 FRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNN 284 (517)
Q Consensus 237 L~ag~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~ 284 (517)
-..+ .+++ +.+.|.-|-.++|+||+++
T Consensus 367 ~~~~-~~~g--------------------l~~~c~~gG~g~a~~~e~~ 393 (393)
T PRK05656 367 IRRD-AKKG--------------------LATLCIGGGQGVALAIERD 393 (393)
T ss_pred HHcC-CCEE--------------------EEEEcccCcceEEEEEecC
Confidence 2211 2222 3345677777888888763
|
|
| >PRK07851 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=83.50 E-value=2.4 Score=45.55 Aligned_cols=93 Identities=15% Similarity=0.222 Sum_probs=55.8
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCC-------eeEEEecCCcchHHHHHHHHHHHHH
Q 010144 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRND-------IKAFNLSGMGCSASVVAVDLVQQLF 237 (517)
Q Consensus 165 a~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~-------~~~~dl~~mgCsggl~AL~lA~~lL 237 (517)
...|+++|++++|++|+|||++=.. ...+...-+-.+.||+.+. ..++.-.. ||+|....++++.+|-
T Consensus 305 ~~~a~~~al~~Agi~~~did~~ei~----d~f~~~~l~~le~lg~~~~pvN~~GG~l~~Ghp~-gasg~~~~~~~~~qL~ 379 (406)
T PRK07851 305 PVEASKQALARAGMSIDDIDLVEIN----EAFAAQVLPSARELGIDEDKLNVSGGAIALGHPF-GMTGARITTTLLNNLQ 379 (406)
T ss_pred HHHHHHHHHHHhCCCHHHCCeehhh----hHHHHHHHHHHHHhCCCccccCCCCChHhhcCcH-HHHHHHHHHHHHHHHH
Confidence 4679999999999999999988321 1122333334477776421 12222232 5666666666666664
Q ss_pred HcCCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEee
Q 010144 238 RTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTN 283 (517)
Q Consensus 238 ~ag~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~ 283 (517)
+. +.++.| .+.|.-|..++|+||++
T Consensus 380 ~~-~~~~g~--------------------~~~~~~gg~g~a~~~e~ 404 (406)
T PRK07851 380 TH-DKTFGL--------------------ETMCVGGGQGMAMVLER 404 (406)
T ss_pred hc-CCCeEE--------------------EEEccccChhhEEEEEe
Confidence 42 233333 33566677778888875
|
|
| >PLN02287 3-ketoacyl-CoA thiolase | Back alignment and domain information |
|---|
Probab=82.76 E-value=3.1 Score=45.46 Aligned_cols=96 Identities=14% Similarity=0.220 Sum_probs=60.4
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecC--------CcchHHHHHHHHHHHH
Q 010144 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSG--------MGCSASVVAVDLVQQL 236 (517)
Q Consensus 165 a~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~--------mgCsggl~AL~lA~~l 236 (517)
...|++++|+++|++|+|||++=+. .......-.-.+.||+.+ ..++++| .|++|....++++.+|
T Consensus 333 ~~~A~~~al~~Agl~~~DID~~Ei~----daFa~~~l~~~e~lG~~~--~pvN~sGG~la~GHp~gAsG~~~v~~l~~qL 406 (452)
T PLN02287 333 PAVAIPAAVKAAGLELDDIDLFEIN----EAFASQFVYCCKKLGLDP--EKVNVNGGAIALGHPLGATGARCVATLLHEM 406 (452)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEec----chHHHHHHHHHHHcCCCc--cccCCCCcHHhccCcHHHHHHHHHHHHHHHH
Confidence 4689999999999999999998443 011222233346777642 2344333 2666666667777776
Q ss_pred HHcCC-CCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeeccc
Q 010144 237 FRTYK-NKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRA 286 (517)
Q Consensus 237 L~ag~-~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~ 286 (517)
-+.+. .+++ +.+.|.-|--++|+||++.+.
T Consensus 407 ~~~~~~~~~g--------------------l~~~c~ggG~g~a~~ie~~~~ 437 (452)
T PLN02287 407 KRRGKDCRFG--------------------VVSMCIGTGMGAAAVFERGDS 437 (452)
T ss_pred HhcCCCCCee--------------------EEEEccccCceeEEEEEecCc
Confidence 54331 0222 334677788889999998664
|
|
| >PRK07661 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=82.57 E-value=2.2 Score=45.62 Aligned_cols=92 Identities=15% Similarity=0.331 Sum_probs=56.9
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecC--------CcchHHHHHHHHHHHH
Q 010144 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSG--------MGCSASVVAVDLVQQL 236 (517)
Q Consensus 165 a~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~--------mgCsggl~AL~lA~~l 236 (517)
...|++++|+++|++|+|||++-++- ..+...-.-.+.||+.+ ..++++| .|++|....++++.+|
T Consensus 291 ~~~a~~~al~~agl~~~did~~ei~d----~f~~~~l~~~e~lg~~~--~~vN~~GG~~a~Ghp~gasG~~~~~el~~qL 364 (391)
T PRK07661 291 PIAAIPKALKLAGLELSDIGLFELNE----AFASQSIQVIRELGLDE--EKVNVNGGAIALGHPLGCTGAKLTLSLIHEM 364 (391)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeCC----HHHHHHHHHHHHcCCCC--CCCCCCCChHHhCCcHHHHHHHHHHHHHHHH
Confidence 46799999999999999999987431 12233334446777642 2333333 2566666666777776
Q ss_pred HHcCCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEee
Q 010144 237 FRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTN 283 (517)
Q Consensus 237 L~ag~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~ 283 (517)
-+.+ .++. +.+.|.-|..+.|+||++
T Consensus 365 ~~~~-~~~g--------------------~~~~c~~gg~g~a~~~e~ 390 (391)
T PRK07661 365 KRRN-EQFG--------------------IVTMCIGGGMGAAGVFEL 390 (391)
T ss_pred HhcC-CCeE--------------------EEEEccccChhhEEEEEe
Confidence 5433 2222 334566677777887764
|
|
| >PRK06445 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=82.37 E-value=2.8 Score=44.84 Aligned_cols=67 Identities=19% Similarity=0.311 Sum_probs=46.4
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecC--------CcchHHHHHHHHHHHH
Q 010144 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSG--------MGCSASVVAVDLVQQL 236 (517)
Q Consensus 165 a~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~--------mgCsggl~AL~lA~~l 236 (517)
...|++++|+++|++|+|||++=+.- ..+...-+..+.||+.+. .+|.+| .||+|...-++++.+|
T Consensus 294 ~~~a~~~al~~Agl~~~dId~~e~~d----~f~~~~l~~~e~lg~~~~--~vN~~GG~la~Ghp~gatG~~~v~e~~~qL 367 (394)
T PRK06445 294 PVPASKKALEKAGLSVKDIDLWEINE----AFAVVVLYAIKELGLDPE--TVNIKGGAIAIGHPLGATGARIVGTLARQL 367 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecc----cchHHHHHHHHHhCCCcc--ccCCCCCHHHcCCCccchHHHHHHHHHHHH
Confidence 46799999999999999999885432 234455566678887532 344443 2667777777777777
Q ss_pred H
Q 010144 237 F 237 (517)
Q Consensus 237 L 237 (517)
-
T Consensus 368 ~ 368 (394)
T PRK06445 368 Q 368 (394)
T ss_pred H
Confidence 5
|
|
| >PRK06365 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=82.06 E-value=11 Score=40.82 Aligned_cols=63 Identities=19% Similarity=0.135 Sum_probs=43.6
Q ss_pred hhhCCC--CCcccccceeecCCCChHHHHHHHhhCCCCcc------------------cchhhhhcccCcccchhhHHHH
Q 010144 380 AVLGAG--LNLKAGIEHFCLHPGGRAVIDGTGKGLELDEY------------------DLEPARMALHRFGNTSAGGLWY 439 (517)
Q Consensus 380 ~~~g~~--~d~~~did~~~~Hq~~~~il~~i~~~Lgl~~e------------------~~~~S~~~l~~~GNtsSASi~~ 439 (517)
+++|++ + +|||.+-+|-.-....-...+.||+.+. .+.+| --+--+||...|+-..
T Consensus 304 ~~AGl~~~~---~DiD~~Ei~D~Fa~~~l~~lE~lGl~~~Ge~~~~~~~G~~~~~G~~piNt~-GG~la~Ghp~GatG~~ 379 (430)
T PRK06365 304 EMAGITDPL---NDLDLIELHDAYTSSEIQTYEDLGLCKYGEGGQFIESGKPELPGKLPVNPS-GGLLAAGHAVGATGIM 379 (430)
T ss_pred HHcCCCCCH---HHCCEEEeecCCcHHHHHHHHHcCCCCCCchHHHHHCCCcCCCCCccccCC-CchhcCCCcccHHHHH
Confidence 688996 5 8999999998865555577889998762 22211 0123479998887777
Q ss_pred HHHHHHH
Q 010144 440 VLGYMEA 446 (517)
Q Consensus 440 ~L~~~~~ 446 (517)
.+.++..
T Consensus 380 ~~~e~~~ 386 (430)
T PRK06365 380 QAVFMFW 386 (430)
T ss_pred HHHHHHH
Confidence 6666554
|
|
| >TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade | Back alignment and domain information |
|---|
Probab=82.04 E-value=3.6 Score=43.78 Aligned_cols=73 Identities=11% Similarity=0.124 Sum_probs=46.5
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCC-----------eeEEEecCCcchHHH
Q 010144 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPAPSLTSRIINRYNLRND-----------IKAFNLSGMGCSASV 227 (517)
Q Consensus 160 ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s-~~~~~Ps~a~~I~~~LGl~~~-----------~~~~dl~~mgCsggl 227 (517)
...+....+.++.|+++|++++|||.+++... +-....+. .++.+.++.+.+ ...=.+++++|++..
T Consensus 202 ~y~~~~~~~~~~~l~~~g~~~~did~~i~H~p~~~~~~k~~-~~~l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~~ 280 (379)
T TIGR01835 202 QYLNAFENAWNDYAKRTGLSLADFAAFCFHVPFTKMGLKAL-RHILKKNYEDEDESVQNAYLESIIYNREVGNLYTGSLY 280 (379)
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHcCEEEECCCCCcHHHHHH-HHHHhhcccccHHHHHHHhhhhhhhhhhcCchHhHHHH
Confidence 34556678899999999999999999887541 11111122 234456665421 123367777888888
Q ss_pred HHHHHH
Q 010144 228 VAVDLV 233 (517)
Q Consensus 228 ~AL~lA 233 (517)
.+|.-+
T Consensus 281 l~L~~~ 286 (379)
T TIGR01835 281 LGLASL 286 (379)
T ss_pred HHHHHH
Confidence 777644
|
This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event. |
| >PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=82.02 E-value=2.8 Score=44.20 Aligned_cols=76 Identities=9% Similarity=0.102 Sum_probs=53.0
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeE-E--E-ecCCcchHHHHHHHHHH
Q 010144 159 SEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKA-F--N-LSGMGCSASVVAVDLVQ 234 (517)
Q Consensus 159 ~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~-~--d-l~~mgCsggl~AL~lA~ 234 (517)
+.+....-.+++++|+++|++++|||.+++.. ..+.+-..+.++||++++-.. . + .++++.++...+|+.+
T Consensus 238 ~~~~~~~~~~i~~~L~~~gl~~~did~~v~HQ----~~~~i~~~i~~~Lgl~~ek~~~~~l~~~GNtssasip~~L~~~- 312 (353)
T PRK12880 238 NMALECEPKSFKEILEFSKVDEKDIAFHLFHQ----SNAYLVDCIKEELKLNDDKVPNFIMEKYANLSACSLPALLCEL- 312 (353)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCCCHHHhhhhhHHhhCCHHHHHHHHHHHHH-
Confidence 34556667789999999999999999998764 234566789999999854322 1 2 4556666777777644
Q ss_pred HHHHcCC
Q 010144 235 QLFRTYK 241 (517)
Q Consensus 235 ~lL~ag~ 241 (517)
+..++
T Consensus 313 --~~~~~ 317 (353)
T PRK12880 313 --DTPKE 317 (353)
T ss_pred --HHcCC
Confidence 44444
|
|
| >COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=81.08 E-value=2.3 Score=44.36 Aligned_cols=74 Identities=12% Similarity=0.258 Sum_probs=51.4
Q ss_pred HhHhhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEe--c-CCcchHHHHHHHH
Q 010144 156 EAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNL--S-GMGCSASVVAVDL 232 (517)
Q Consensus 156 ~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl--~-~mgCsggl~AL~l 232 (517)
+-.+.+..++.++.+++|+++|++++|||.++... .-..+-..++++||++++-...++ . +++-++-..+|+.
T Consensus 216 ~vfk~av~~~~~~~~~~L~~~~l~~~dId~~vpHQ----an~ri~~~i~~~l~~~~~k~~~~~~~yGNtsaAsiplaL~~ 291 (323)
T COG0332 216 EVFKFAVRAMPKAIEEVLEKAGLTPEDIDWFVPHQ----ANLRIIEAIAKKLGIPEEKVVVTVDKYGNTSAASIPLALDE 291 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEcccc----ccHHHHHHHHHHcCCCHHHHhhHHHHhcccccchHHHHHHH
Confidence 34578899999999999999999999999988643 234556788899999754333333 2 2233444455544
Q ss_pred H
Q 010144 233 V 233 (517)
Q Consensus 233 A 233 (517)
+
T Consensus 292 ~ 292 (323)
T COG0332 292 A 292 (323)
T ss_pred H
Confidence 4
|
|
| >PLN03169 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=80.50 E-value=4.6 Score=43.19 Aligned_cols=87 Identities=10% Similarity=0.225 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeE------EEecCCcchHHHHHHHHHH
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKA------FNLSGMGCSASVVAVDLVQ 234 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~------~dl~~mgCsggl~AL~lA~ 234 (517)
+..-...+++++|+++|++++|||.+.+...+.+ +.+-..++++||++++-.. -+.++|++++.+.+|+.+.
T Consensus 279 ~~~~~~~~i~~~L~~~gl~~~did~~~~v~Hq~n--~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~~ 356 (391)
T PLN03169 279 IEDNIEGFCKKLMKKAGLVEKDYNDLFWAVHPGG--PAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYMR 356 (391)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCcceEEecCCC--HHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHHH
Confidence 3444566778999999999999984433332222 4566788999999854322 3677888888888887664
Q ss_pred HH--HH-cCCCCEEEEEE
Q 010144 235 QL--FR-TYKNKLAIVVS 249 (517)
Q Consensus 235 ~l--L~-ag~~~~aLVVs 249 (517)
.- ++ ..+.+++|+++
T Consensus 357 ~~~~~~~~~~gd~~ll~a 374 (391)
T PLN03169 357 EELKKKGEEDEEWGLILA 374 (391)
T ss_pred HhhcccCCCCCcEEEEEE
Confidence 21 11 11345666555
|
|
| >PRK08235 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=80.06 E-value=3.5 Score=44.09 Aligned_cols=68 Identities=19% Similarity=0.323 Sum_probs=45.0
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecC--------CcchHHHHHHHHHHHH
Q 010144 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSG--------MGCSASVVAVDLVQQL 236 (517)
Q Consensus 165 a~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~--------mgCsggl~AL~lA~~l 236 (517)
...|+++||+++|++|+|||++-+. ...+...-+..+.||+.+ ..++++| .|++|....++++.+|
T Consensus 293 ~~~a~~~al~~agl~~~did~~e~~----d~f~~~~l~~~e~lg~~~--~pvN~~GG~la~Ghp~gasG~~~~~~l~~qL 366 (393)
T PRK08235 293 PGYAINALLEKTGKTVEDIDLFEIN----EAFAAVALASTEIAGIDP--EKVNVNGGAVALGHPIGASGARIIVTLIHEL 366 (393)
T ss_pred HHHHHHHHHHHhCCCHHHCCeehhc----chhHHHHHHHHHHhCCCc--ccCCcCCchHHhCCcHHHHHHHHHHHHHHHH
Confidence 4579999999999999999988532 123344456678888752 2334443 2566666667777666
Q ss_pred HH
Q 010144 237 FR 238 (517)
Q Consensus 237 L~ 238 (517)
-.
T Consensus 367 ~~ 368 (393)
T PRK08235 367 KR 368 (393)
T ss_pred Hh
Confidence 53
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 517 | ||||
| 3tsy_A | 979 | 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Pr | 2e-04 |
| >pdb|3TSY|A Chain A, 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Protein Length = 979 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} Length = 374 | Back alignment and structure |
|---|
Score = 252 bits (644), Expect = 3e-79
Identities = 52/381 (13%), Positives = 122/381 (32%), Gaps = 44/381 (11%)
Query: 101 RLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGI-----GEETYGPRNVVEGREESPS-- 153
+ +S + + E + + S I + P N ++ R
Sbjct: 27 PISQQSLKDSISNDFSDKAETNEKVKRIFEQSQIKTRHLVRDYTKPENSIKFRHLETITD 86
Query: 154 -LAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRND 212
+ + ++ + +I +V S P + ++I+ L D
Sbjct: 87 VNNQFKKVVPDLAQQACLRALKDWGGDKGDITHIVSVTSTGIIIPDVNFKLIDLLGLNKD 146
Query: 213 IKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILF 272
++ +L+ MGC A + ++ L + +VV TE ++ M+++ +F
Sbjct: 147 VERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEVCSLHFSNTDGGDQMVASSIF 206
Query: 273 RSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLT 332
G + ++ N ++ + ++ C + F + + A +E + + L +
Sbjct: 207 ADGSAAYIIGCNPRIEETPLYEVMCSINRSFPNTENA--MVWDLEKEGWN--LGLDASIP 262
Query: 333 KAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGI 392
+ L+ K L + A
Sbjct: 263 IVIGSGIEAFVDTLLDKAK------------------------------LQTSTAISAKD 292
Query: 393 EHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKK 452
F +H GG++++ L +D + H +GN S+ + +V+ + K
Sbjct: 293 CEFLIHTGGKSILMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIFVMDHARKSK--SL 350
Query: 453 GDRILMISLGAGFKCNNCVWE 473
+ ++ G G C +
Sbjct: 351 PTYSISLAFGPGLAFEGCFLK 371
|
| >3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A Length = 387 | Back alignment and structure |
|---|
Score = 243 bits (621), Expect = 1e-75
Identities = 55/348 (15%), Positives = 110/348 (31%), Gaps = 45/348 (12%)
Query: 136 EETYGPRNVVEGREESPS---LAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSL 192
EE R+ L A + E+ + K A ++I LVV +
Sbjct: 68 EEMLSAHPEFVDRDAPSLDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNS 127
Query: 193 FSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTES 252
+ P + R++ LR ++ L GC A A+ L + L + +VV+ E
Sbjct: 128 GAHVPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAENSRGARVLVVAAEL 187
Query: 253 MGPNWYCGREKSM--MLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAY 310
+ E +L LF G ++++ + + + ++ +T +D A
Sbjct: 188 TLMYFTGPDEGCFRTLLVQGLFGDGAAAVIVGADADDVERPLFEIVSAAQTIIPESDHAL 247
Query: 311 ECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIR 370
G L +Q+ L + +L +
Sbjct: 248 NMRFTERRLDGV----LGRQVPGLIGDNVERCLLDMFGPLLGGDGGGGW----------- 292
Query: 371 KSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFG 430
+ +HPG ++D L L+ L +R L +G
Sbjct: 293 --------------------NDLFWAVHPGSSTIMDQVDAALGLEPGKLAASRRVLSDYG 332
Query: 431 NTSAGGLWYVLGYMEAKKRLKKG-----DRILMISLGAGFKCNNCVWE 473
N S + + L + +++ + +M++ G G + +
Sbjct: 333 NMSGATVIFALDELRRQRKEAAAAGEWPELGVMMAFGPGMTVDAMLLH 380
|
| >3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A Length = 387 | Back alignment and structure |
|---|
Score = 174 bits (442), Expect = 1e-49
Identities = 54/374 (14%), Positives = 117/374 (31%), Gaps = 59/374 (15%)
Query: 120 EEYRFLLKNMVSSGIG-------EETYGPRNVVEGREESP---SLAEAFSEMDEIIFDTL 169
+ + +S I EE + E + + E+ +
Sbjct: 47 NLKQKFKRLCENSRIEKRYLHVTEEILKENPNIAAYEATSLNVRHKMQVKGVAELGKEAA 106
Query: 170 DKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVA 229
K S+I L+V P ++ +L +K F +GC A
Sbjct: 107 LKAIKEWGQPKSKITHLIVCCLAGVDMPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTV 166
Query: 230 VDLVQQLFRTYKNKLAIVVSTESMGPNWYCGREKSM--MLSNILFRSGGCSMLLTNNRAL 287
+ L + + K ++V +E + E + M+ + G ++++ + L
Sbjct: 167 LRLAKDIAENNKGARVLIVCSEMTTTCFRGPSETHLDSMIGQAILGDGAAAVIVGADPDL 226
Query: 288 -KHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVL 346
+ I +L +T + A E + + G + +L
Sbjct: 227 TVERPIFELVSTAQTIVPESHGAIEGHL---LESG-----------------LSFHLYKT 266
Query: 347 VPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVID 406
VP + + + + +A ++ + HPGG A++D
Sbjct: 267 VPTL--ISNNIKTCLS----------------DAFTPLNIS-DWNSLFWIAHPGGPAILD 307
Query: 407 GTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAK-------KRLKKGDRILMI 459
+ L++ L+ R L +GN S+ +++++ M K + + ++
Sbjct: 308 QVTAKVGLEKEKLKVTRQVLKDYGNMSSATVFFIMDEMRKKSLENGQATTGEGLEWGVLF 367
Query: 460 SLGAGFKCNNCVWE 473
G G V
Sbjct: 368 GFGPGITVETVVLR 381
|
| >3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} Length = 413 | Back alignment and structure |
|---|
Score = 162 bits (410), Expect = 8e-45
Identities = 49/375 (13%), Positives = 113/375 (30%), Gaps = 51/375 (13%)
Query: 98 ETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPR-NVVEGREESPSLAE 156
E+R + G + + +V G E+ ++ S ++ E
Sbjct: 73 ESRG----WMLPLEAAVAPGGGGDLGAAREALVRDGFTEQDANRAIAALKAVPASQTVQE 128
Query: 157 ----AFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRND 212
A+ + + +++D L+ + S P L + NR LR D
Sbjct: 129 RTAPAWEAVQAYGERAARGALQIAGLDVADVDCLITSNSTTPALPGLDVALANRLPLRGD 188
Query: 213 IKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCG-REKSMMLSNIL 271
+ C A ++ L L +++ +VV +E++ + ++ +L
Sbjct: 189 TMLLPATQWACVAGTRSLALAADLVAADPDRVVLVVISEALSTTYQPADDTLESLIVRLL 248
Query: 272 FRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQL 331
F + ++T +++L+L+ + + ++ H F + ++
Sbjct: 249 FADTAVAAVVTGRPR--PESVLRLDAAWHHTLPGTRDLHR--LETRADGTH--FVMDRRG 302
Query: 332 TKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAG 391
+A T + L +
Sbjct: 303 PRAVQETVTAMWEWL--------------------------------RVRYEDDPS-SWH 329
Query: 392 IEHFCLHPGGRAVIDGTGKGLELD-EYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRL 450
+ HPGG V++ + + + L + GN ++ +L
Sbjct: 330 PDVLLAHPGGTRVLEYMEQTMPDEWPSGLLSYSRDSYTSGNRGGAAVFDILRRAH-DAGQ 388
Query: 451 KKGDRILMISLGAGF 465
K G R ++ + G
Sbjct: 389 KTGSRAVLYAAAPGL 403
|
| >1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A Length = 413 | Back alignment and structure |
|---|
Score = 160 bits (405), Expect = 3e-44
Identities = 59/375 (15%), Positives = 113/375 (30%), Gaps = 60/375 (16%)
Query: 120 EEYRFLLKNMVSSGIG-------EETYGPRNVVEGREESPSLAE----AFSEMDEIIFDT 168
E + S I EE V E PSL E+ + +
Sbjct: 73 ELKDKFKRICERSAIKQRYMYLTEEILKKNPDVCAFVEVPSLDARQAMLAMEVPRLAKEA 132
Query: 169 LDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVV 228
+K S S I L+ + P + L +K + GC A
Sbjct: 133 AEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGT 192
Query: 229 AVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGREKSM--MLSNILFRSGGCSMLLTNN-R 285
+ + + L + +V+ +E+ + E + ++ LF G ++++ +
Sbjct: 193 VLRMAKDLAENNRGARVLVICSETTAVTFRGPSETHLDSLVGQALFGDGASALIVGADPI 252
Query: 286 ALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQV 345
KA ++ +T +++ A G ++ + T L+
Sbjct: 253 PQVEKACFEIVWTAQTVVPNSEGAI-------------GGKVREV-------GLTFQLKG 292
Query: 346 LVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVI 405
VP ++ I + +HPGGRA++
Sbjct: 293 AVPDLI--------------SANIENCM-----VEAFSQFKISDWNKLFWVVHPGGRAIL 333
Query: 406 DGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAK-------KRLKKGDRILM 458
D L LD L P R + +GN S+ + ++L + + ++
Sbjct: 334 DRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVL 393
Query: 459 ISLGAGFKCNNCVWE 473
G G V +
Sbjct: 394 FGFGPGLTIETVVLK 408
|
| >3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} Length = 465 | Back alignment and structure |
|---|
Score = 155 bits (392), Expect = 6e-42
Identities = 57/434 (13%), Positives = 127/434 (29%), Gaps = 60/434 (13%)
Query: 100 RRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETY--GPRNVVEGREESPSLAE- 156
L ++ + + + +L +GI + + P + + + P++ E
Sbjct: 44 YSLGPDAIDILS-KRYHPESPAMKKVLAINRYTGIDQRSSIGNPDHPLVNKPNPPTVKEL 102
Query: 157 ---AFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDI 213
S+ + + K A + P++I +V S P + L + +
Sbjct: 103 HEVFMSDGVPLAVEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELGLSDRL 162
Query: 214 KAFNLSGMGCSASVVAVDLVQQLFRTY----KNKLAIVVSTESM-----GPNWYCGREKS 264
+ L G+GCS + A+ L + K +V++ E +
Sbjct: 163 EKVLLHGIGCSGGLAALRTAANLCLGHTARGKPARILVLALEVSTTMVRSELESIDALQE 222
Query: 265 MMLSNILFRSGGCSMLLTNN--RALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGH 322
+ LF +++L+N A AI L ++ V+
Sbjct: 223 TRIGIALFSDCASAVILSNGIGEAPGKPAIYDLLGWENRVIPDSEHDL--GFDVDPMGWK 280
Query: 323 PGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVL 382
L+ ++ A + L+ +
Sbjct: 281 --VVLSPRVPVLAKASLQPTYADLLSSLQDQLPSS------------------------- 313
Query: 383 GAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLG 442
K + +HPGG ++ G + L + + GN+S+ ++ VL
Sbjct: 314 ----YQKPADFDWAMHPGGATILSGAESAMGLTPEHMRASYDRYINHGNSSSATIFSVLN 369
Query: 443 YMEAKKRLKKG------DRILMISLGAGFKCNNCVWEVMKDLEDPNVWKDCIDRYPPKSL 496
+ K + ++ + G G C+ + + PP++
Sbjct: 370 RLREKDMDALAPGGKVKEYVVGCAFGPGINVEMCMLKRRMNAPARTTTG---LDTPPETD 426
Query: 497 ANPFQERYSWLNDE 510
+ S +
Sbjct: 427 DSEGPGPGSSAGSD 440
|
| >1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A Length = 393 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 5e-30
Identities = 60/369 (16%), Positives = 123/369 (33%), Gaps = 55/369 (14%)
Query: 103 DTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGP-----RNVVEGREESPSLAEA 157
D R+ +K + R + + + + P R + E + LA
Sbjct: 62 DPGQRERIPRVYQKSRITT-RRMAVDPLDAKFDVFRREPATIRDRMHLF-YEHAVPLAVD 119
Query: 158 FSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFN 217
+ A +EI +LV+ S AP + I+ L I
Sbjct: 120 ----------VSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRVV 169
Query: 218 LSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGC 277
++ MGC+A++ A+ R + A+VV E N + + ++ + LF G
Sbjct: 170 VNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELCSVNAVFADDINDVVIHSLFGDGCA 229
Query: 278 SMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAAL 337
++++ ++ + L ++ + ++ + +
Sbjct: 230 ALVIGASQVQEK--------LEPGKVVV-RSSFSQLL--DNTEDGIVLGVNHN------- 271
Query: 338 AFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCL 397
T L +P + + + + E + GL + I+ + +
Sbjct: 272 GITCELSENLPGYI--------------FSGVAPVVT----EMLWDNGLQ-ISDIDLWAI 312
Query: 398 HPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKG-DRI 456
HPGG +I+ + + L + + L RFGN + L +VL M + K
Sbjct: 313 HPGGPKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQQAESAKAISTG 372
Query: 457 LMISLGAGF 465
+ + G G
Sbjct: 373 VAFAFGPGV 381
|
| >1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 Length = 382 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 5e-29
Identities = 51/322 (15%), Positives = 108/322 (33%), Gaps = 61/322 (18%)
Query: 148 REESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSP--APSLTSRIIN 205
E+ S A + + ++ ++IDV++ + PSLT+ +IN
Sbjct: 81 EREAKSRVPAVIQ----------RALDDAELLATDIDVIIYVSC--TGFMMPSLTAWLIN 128
Query: 206 RYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTE--SMGPNWYCGREK 263
+ + ++ +GC+A A++ Y A++V+ E S+
Sbjct: 129 EMGFDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEFCSLCYQPT-DLGV 187
Query: 264 SMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHP 323
+L N LF G + ++ + L R + +
Sbjct: 188 GSLLCNGLFGDGIAAAVVRGRGGTGVR-------LERNG----------SYLIPKTEDWI 230
Query: 324 GFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLG 383
+ + F L VP + + + E
Sbjct: 231 MYDVKAT-------GFHFLLDKRVPATM---------------EPLAPALK----ELAGE 264
Query: 384 AGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGY 443
G + + ++ + +H GG ++D LE+D + +R L +GN ++ + L
Sbjct: 265 HGWD-ASDLDFYIVHAGGPRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDALRR 323
Query: 444 MEAKKRLKKGDRILMISLGAGF 465
+ + +++G R L+ G G
Sbjct: 324 LFDEGGVEEGARGLLAGFGPGI 345
|
| >3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A Length = 393 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 1e-25
Identities = 49/327 (14%), Positives = 99/327 (30%), Gaps = 57/327 (17%)
Query: 148 REESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRY 207
EE P LA+ +K SEI LV P R+
Sbjct: 99 VEEIPRLAKE----------AAEKAIKEWGRPKSEITHLVFCSISGIDMPGADYRLATLL 148
Query: 208 NLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGREKSM-- 265
L + + C + + + L + +VV+ E ++ E
Sbjct: 149 GLPLTVNRLMIYSQACHMGAAMLRIAKDLAENNRGARVLVVACEITVLSFRGPNEGDFEA 208
Query: 266 MLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGF 325
+ F G ++++ + + + + A + + + QG G
Sbjct: 209 LAGQAGFGDGAGAVVVGADPLEGIE---------KPIYEI-AAAMQETV--AESQGAVGG 256
Query: 326 RLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAG 385
L +T +P I+ + + +S A+ G
Sbjct: 257 HLRAF-------GWTFYFLNQLPAII--------------ADNLGRSLE----RALAPLG 291
Query: 386 LNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYME 445
+ + + HPG A+ID L+L L AR +GN + +++V+ +
Sbjct: 292 VR-EWNDVFWVAHPGNWAIIDAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELR 350
Query: 446 AKKRLKKG-------DRILMISLGAGF 465
+ ++ +++ G G
Sbjct: 351 KRSAVEGRSTTGDGLQWGVLLGFGPGL 377
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 59.9 bits (144), Expect = 1e-09
Identities = 83/551 (15%), Positives = 148/551 (26%), Gaps = 154/551 (27%)
Query: 90 YECYKPCDETRR-LDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGR 148
++C D + L E ++ K + L ++S EE + VE
Sbjct: 33 FDCKDVQDMPKSILSKEEIDHII--MSKDAVSGTLRLFWTLLSKQ--EEMV--QKFVEEV 86
Query: 149 EES--PSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINR 206
L E ++ T + + D L + +F+ SR+
Sbjct: 87 LRINYKFLMSPIKT--EQRQPSMM-----TRMYIEQRDRLYNDNQVFAKYN--VSRLQPY 137
Query: 207 YNLRNDIKAFN------LSGM-GCSASVVAVDLVQQL-------FRTYKNKLAIVVSTES 252
LR + + G+ G + VA+D+ F+ + L S E+
Sbjct: 138 LKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPET 197
Query: 253 -----------MGPNWYCGREKSMM------------LSNILFRSGGCSMLLT-----NN 284
+ PNW R L +L + LL N
Sbjct: 198 VLEMLQKLLYQIDPNW-TSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNA 256
Query: 285 RALKHKAILKLNC--LVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAA-ALAFTM 341
+A L+C L+ T F + H LT K+
Sbjct: 257 KAWNA---FNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDC 313
Query: 342 NLQVL---VPKILPLR---------------EQFRYVIQSYYENRIRKSTSSTKPE---- 379
Q L V P R + +++V I S + +P
Sbjct: 314 RPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRK 373
Query: 380 -----AVLGAGLNLKAGI-------------EHFC--LHPGGRAVIDGTGK-------GL 412
+V ++ + LH ++++ K +
Sbjct: 374 MFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLH--KYSLVEKQPKESTISIPSI 431
Query: 413 ELDEYDLEPARMALHR----------------FGNTSAGGLWYV-LGY-MEAKKRLKKGD 454
L+ ALHR +Y +G+ ++ + ++
Sbjct: 432 YLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMT 491
Query: 455 RILMISLGAGF---K------CNNCVWEVMKDLEDPNVWKDCIDRYPPKSLANPFQERYS 505
M+ L F K N ++ L+ +K I PK Y
Sbjct: 492 LFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPK---------YE 542
Query: 506 WLNDEYLSFVR 516
L + L F+
Sbjct: 543 RLVNAILDFLP 553
|
| >3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} Length = 392 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 5e-09
Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 10/65 (15%)
Query: 405 IDGTGKGLELDEYDLEPARMALHRFGNTSAGG----LWYVLGYMEAKKRLKKGDRILMIS 460
+ G+ + + + + L + NTS+ G + + + +GD L+ S
Sbjct: 324 NEIIGRKVLGRDPTRDENVIILDDYANTSSAGSIIAFH------KHQDDMAQGDLGLICS 377
Query: 461 LGAGF 465
GAG+
Sbjct: 378 FGAGY 382
|
| >3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* Length = 357 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 8e-09
Identities = 42/310 (13%), Positives = 94/310 (30%), Gaps = 65/310 (20%)
Query: 174 ARTDISPSEIDVLVV------NVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASV 227
R D+ P+++ +++ + L+ A + + + AF L+ C+ +
Sbjct: 67 GRGDVDPADVSLVLHSSLWFQGIDLWPAASYVAHEA-----VGRHVPAFGLAQ-RCNGGM 120
Query: 228 VAVDLVQQLFRT---YKNKLAIVVSTESMGP--NWY----CGREKSMMLSNILFRSGGCS 278
A++L + + + GP + + ++ G +
Sbjct: 121 GAIELAGAYLGSGIGAGHAALLTTGDRFAGPRIDRWNSVDV----------TMYGDGAAA 170
Query: 279 MLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALA 338
++L+ ++ T G D + E + ++ +
Sbjct: 171 LVLSTRDGFAR--------VLSTATGV-DNSLEILARGDEPFAPHPVEPSPVADLGT--- 218
Query: 339 FTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLH 398
T+ E + I ++ +A+ AG I H +
Sbjct: 219 RTVRG----------AELAD--LPDLTHRYIDLLVAAKT-QALEDAGTA-IEDIAHAVIP 264
Query: 399 PGGRAVIDGTGKGLELDEYDLEPARMAL---HRFGNTSAGGLWYVLGYMEAKKRLKKGDR 455
R L L R + G+ AG + L ++ ++ GDR
Sbjct: 265 VSRRGTGHELHDLLGLP-----DERTSWAYGRTTGHVGAGDQYAGLAHLVENALVQPGDR 319
Query: 456 ILMISLGAGF 465
+L+ GAG+
Sbjct: 320 VLLFGGGAGY 329
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A Length = 345 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 4e-08
Identities = 45/309 (14%), Positives = 89/309 (28%), Gaps = 70/309 (22%)
Query: 174 ARTDISPSEIDVLVVNVS----LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVA 229
+I +I +L+ L PS S + + + F+++ C A +
Sbjct: 81 IDANIGIEKIGLLINTSVSRDYLE---PSTASIVSGNLGVSDHCMTFDVAN-ACLAFING 136
Query: 230 VDLVQQLFRT--YKNKLAIVVSTESMGP--NWYCGREKSMMLSN---------ILFRSGG 276
+D+ ++ A+VV E+ R S ++ + G
Sbjct: 137 MDIAARMLERGEIDY--ALVVDGETANLVYEKTLERMTSPDVTEEEFRNELAALTLGCGA 194
Query: 277 CSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAA 336
+M++ R+ + V ++ +G+
Sbjct: 195 AAMVMA--RSELVPDAPRYKGGVTRSATEWNKLC---------RGNLDR----------- 232
Query: 337 LAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFC 396
+ R I + + + A G ++ F
Sbjct: 233 --MVTDT----------RLLLIEGI--------KLAQKTFV-AAKQVLGWA-VEELDQFV 270
Query: 397 LHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRI 456
+H R K +D GN + VL ++ RLKKGDRI
Sbjct: 271 IHQVSRPHTAAFVKSFGIDP---AKVMTIFGEHGNIGPASVPIVLSKLKELGRLKKGDRI 327
Query: 457 LMISLGAGF 465
++ +G+G
Sbjct: 328 ALLGIGSGL 336
|
| >4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} Length = 354 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 3e-07
Identities = 48/306 (15%), Positives = 83/306 (27%), Gaps = 58/306 (18%)
Query: 171 KLFARTDISPSEIDVLVVNVS----LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSAS 226
KL A ID L+ P+ + +L A +++ GCS
Sbjct: 76 KLLAGLGWQADSIDALIFVSQTPNYRL---PATAFVLQAELDLPASCLALDINL-GCSGY 131
Query: 227 VVAVDLVQQLFRT--YKNKLAIVVSTESMGPNWY----CGREKSMMLSNILFRSGGCSML 280
A+ L L +T K L V T S + +LF G
Sbjct: 132 PQALWLGMNLIQTGAAKRVLLAVGDTISKMIDPTDRSTS----------LLFGDAGTMTA 181
Query: 281 LTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAF- 339
L A G+ D + V P + +
Sbjct: 182 L---ETSNGDAAAH------FIIGA-DGKGARNLIVPSGGFKPYDAAADERMAGKSPECL 231
Query: 340 TMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHP 399
M+ E F + + + AG + K + F H
Sbjct: 232 FMDG----------GEIFNFTL--------NAVPKLVS-RTLDIAGRD-KDSYDAFLFHQ 271
Query: 400 GGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMI 459
++ K L E + + +GNTS + ++ + ++ ++ M
Sbjct: 272 ANLFMLKHLAKKAGLPA---ERVPVNIGEYGNTSCASIPLLITTELKDRLKEETLQLGMF 328
Query: 460 SLGAGF 465
G G+
Sbjct: 329 GFGVGY 334
|
| >1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 Length = 322 | Back alignment and structure |
|---|
Score = 50.2 bits (121), Expect = 7e-07
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 405 IDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAG 464
ID + L L E + + R+GNTS + L R+++GD +L++S GAG
Sbjct: 253 IDAARERLGLPW---ERVAVNVDRYGNTSTASIPLALKEAVDAGRIREGDHVLLVSFGAG 309
Query: 465 F 465
Sbjct: 310 L 310
|
| >1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A Length = 313 | Back alignment and structure |
|---|
Score = 49.8 bits (120), Expect = 9e-07
Identities = 12/61 (19%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 405 IDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAG 464
++ + L + + + ++++++GNTSA + + +LK D I+++ G G
Sbjct: 245 MESARERLGISK---DKMSVSVNKYGNTSAASIPLSIDQELKNGKLKDDDTIVLVGFGGG 301
Query: 465 F 465
Sbjct: 302 L 302
|
| >3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* Length = 359 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 9e-07
Identities = 11/65 (16%), Positives = 26/65 (40%), Gaps = 13/65 (20%)
Query: 405 IDGTGKGLELDEYDLEPARMALHRFGNTSAG----GLWYVLGYMEAKKRLKKGDRILMIS 460
+D + L + + + + R GN ++ L ++ G R+L+++
Sbjct: 287 LDAVQEQLGIPQ---HKFAVTVDRLGNMASASTPVTLA------MFWPDIQPGQRVLVLT 337
Query: 461 LGAGF 465
G+G
Sbjct: 338 YGSGA 342
|
| >2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} Length = 309 | Back alignment and structure |
|---|
Score = 49.4 bits (119), Expect = 1e-06
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 405 IDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAG 464
I+ + L + + E + + ++GNTSA + L + ++K+GD ILM ++G G
Sbjct: 243 INALAEKLNIPK---EKVFVNIQKYGNTSAASIPIALHEAIKEGKVKRGDLILMTAMGGG 299
Query: 465 F 465
Sbjct: 300 L 300
|
| >2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} Length = 331 | Back alignment and structure |
|---|
Score = 49.0 bits (118), Expect = 2e-06
Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 3/61 (4%)
Query: 405 IDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAG 464
+ L+L E + GNT A + L + + L+ G +++ GAG
Sbjct: 257 LAAVADQLDLPV---ERVVSNIAEVGNTVAASIPLALAHGLRQGILRDGGNMVLTGFGAG 313
Query: 465 F 465
Sbjct: 314 L 314
|
| >3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A Length = 365 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 6e-06
Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 405 IDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAG 464
+D K +++ E + + GNT + L L M A L +G R++++ G G
Sbjct: 299 LDALRKKMKIPE---HKFPVLMEHCGNTVSSTLPLALETMRANGTLARGMRLMLLGFGVG 355
Query: 465 F 465
+
Sbjct: 356 Y 356
|
| >3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} Length = 323 | Back alignment and structure |
|---|
Score = 47.1 bits (113), Expect = 8e-06
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 405 IDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAG 464
I T K LE+D + L ++ N SA + L R+++G +L+ + G G
Sbjct: 257 ITATAKKLEMDM---SQVVVTLDKYANNSAATVPVALDEAIRDGRIQRGQLLLLEAFGGG 313
Query: 465 F 465
+
Sbjct: 314 W 314
|
| >4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} Length = 333 | Back alignment and structure |
|---|
Score = 46.7 bits (112), Expect = 1e-05
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 405 IDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAG 464
+ T + L L + E + + GNTSA + L R+K+G +L+ +G G
Sbjct: 267 MQSTCRKLGLPQ---ERMIVTVGEHGNTSAASIPLALDVAVRDGRIKRGQNVLIEGVGGG 323
Query: 465 F 465
F
Sbjct: 324 F 324
|
| >1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* Length = 317 | Back alignment and structure |
|---|
Score = 46.3 bits (111), Expect = 1e-05
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 405 IDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAG 464
I T K L + + + L R GNTSA + L R+K G +L+ + G G
Sbjct: 251 ISATAKKLGMSM---DNVVVTLDRHGNTSAASVPCALDEAVRDGRIKPGQLVLLEAFGGG 307
Query: 465 F 465
F
Sbjct: 308 F 308
|
| >1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A Length = 335 | Back alignment and structure |
|---|
Score = 46.3 bits (111), Expect = 1e-05
Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Query: 405 IDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAG 464
+ K L+L D A + GNTSA + + + K GD L+I GAG
Sbjct: 265 NELLVKNLQLRP-DAVVAN-DIEHTGNTSAASIPLAMAELLTTGAAKPGDLALLIGYGAG 322
Query: 465 F 465
Sbjct: 323 L 323
|
| >1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* Length = 396 | Back alignment and structure |
|---|
Score = 45.6 bits (108), Expect = 2e-05
Identities = 20/101 (19%), Positives = 31/101 (30%), Gaps = 15/101 (14%)
Query: 384 AGLNLKAGIEHFCLH-PGGRAVIDGTGKGLELD--------EYDLEPARMALHRFGNTSA 434
G +L C H P + ++ E A GN
Sbjct: 220 QGKSLAD-FASLCFHVPFTKMGKKALESIIDNADETTQERLRSGYEDAVDYNRYVGNIYT 278
Query: 435 GGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVM 475
G L+ L + + L+ G+ I + S G+G V E
Sbjct: 279 GSLYLSLISLLENRDLQAGETIGLFSYGSG-----SVGEFY 314
|
| >1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 Length = 339 | Back alignment and structure |
|---|
Score = 44.4 bits (106), Expect = 5e-05
Identities = 16/62 (25%), Positives = 21/62 (33%), Gaps = 4/62 (6%)
Query: 405 IDGTGKGLELDEYDLEPA-RMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGA 463
ID L + E GNTS+ + L + + G LMI GA
Sbjct: 264 IDVLVDRLGVPE---HVVVSRDAEDTGNTSSASVALALDRLVRSGAVPGGGPALMIGFGA 320
Query: 464 GF 465
G
Sbjct: 321 GL 322
|
| >3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* Length = 321 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 1e-04
Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 5/63 (7%)
Query: 405 IDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGD--RILMISLG 462
ID + ++ E + ++GNTSA + +L L G R+++ G
Sbjct: 253 IDKIARKTKISR---EKFLTNMDKYGNTSAASIPILLDEAVENGTLILGSQQRVVLTGFG 309
Query: 463 AGF 465
G
Sbjct: 310 GGL 312
|
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Length = 979 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 2e-04
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 398 HPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKG 453
HPGG A++D L LD+ LE R L +GN S+ + ++L M KK LK
Sbjct: 890 HPGGPAILDAVEAKLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMR-KKSLKGE 944
|
| >3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* Length = 388 | Back alignment and structure |
|---|
Score = 41.5 bits (97), Expect = 5e-04
Identities = 20/92 (21%), Positives = 31/92 (33%), Gaps = 11/92 (11%)
Query: 384 AGLNLKAGIEHFCLH---------PGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSA 434
GL+ + H + D T E E + + R GN
Sbjct: 225 TGLDFAD-YDALAFHIPYTKMGKKALLAKISDQTEAEQERILARYEESIIYSRRVGNLYT 283
Query: 435 GGLWYVL-GYMEAKKRLKKGDRILMISLGAGF 465
G L+ L +E L G++I + S G+G
Sbjct: 284 GSLYLGLISLLENATTLTAGNQIGLFSYGSGA 315
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 517 | |||
| 4ewp_A | 350 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans | 100.0 | |
| 3gwa_A | 365 | 3-oxoacyl-(acyl-carrier-protein) synthase III; str | 100.0 | |
| 3il3_A | 323 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 100.0 | |
| 3il6_A | 321 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 100.0 | |
| 4dfe_A | 333 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci | 100.0 | |
| 4efi_A | 354 | 3-oxoacyl-(acyl-carrier protein) synthase; structu | 100.0 | |
| 3e1h_A | 465 | PKSIIINC, putative uncharacterized protein; resorc | 100.0 | |
| 3h78_A | 359 | PQS biosynthetic enzyme; PQSD, anthranilic acid, a | 100.0 | |
| 3euo_A | 379 | Type III pentaketide synthase; alpha helix, acyltr | 100.0 | |
| 3ov2_A | 393 | Curcumin synthase; type III polyketide synthase, t | 100.0 | |
| 3oit_A | 387 | OS07G0271500 protein; type III polyketide synthase | 100.0 | |
| 3s21_A | 345 | 3-oxoacyl-[ACP] synthase III; non-decarboxylative | 100.0 | |
| 3led_A | 392 | 3-oxoacyl-acyl carrier protein synthase III; struc | 100.0 | |
| 3v7i_A | 413 | Putative polyketide synthase; type III polyketide | 100.0 | |
| 2h84_A | 374 | Steely1; thiolase-fold, type III polyketide syntha | 100.0 | |
| 1i88_A | 389 | CHS2, chalcone synthase 2; polyketide synthase, tr | 100.0 | |
| 3awk_A | 402 | Chalcone synthase-like polyketide synthase; type I | 100.0 | |
| 2p0u_A | 413 | Stilbenecarboxylate synthase 2; polyketide synthas | 100.0 | |
| 1ted_A | 393 | PKS18; thiolase fold, substrate binding tunnel, tr | 100.0 | |
| 1xes_A | 413 | Dihydropinosylvin synthase; native structure, tran | 100.0 | |
| 3s3l_A | 357 | CERJ; acyltransferase, FABH homologue, KS III homo | 100.0 | |
| 3a5r_A | 387 | Benzalacetone synthase; chalcone synthase, type II | 100.0 | |
| 1ee0_A | 402 | 2-pyrone synthase; polyketide synthase, thiolase f | 100.0 | |
| 2x3e_A | 331 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, | 100.0 | |
| 2d3m_A | 406 | Pentaketide chromone synthase; chalcone synthase, | 100.0 | |
| 1u0m_A | 382 | Putative polyketide synthase; type III polyketide | 100.0 | |
| 1mzj_A | 339 | Beta-ketoacylsynthase III; beta-ketosynthase, arom | 100.0 | |
| 1hnj_A | 317 | Beta-ketoacyl-acyl carrier protein synthase III; F | 100.0 | |
| 2v4w_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 100.0 | |
| 1zow_A | 313 | 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB | 100.0 | |
| 3tsy_A | 979 | Fusion protein 4-coumarate--COA ligase 1, resvera | 100.0 | |
| 3v4n_A | 388 | HMG-COA synthase; hydroxymethylglutaryl-COA syntha | 100.0 | |
| 2ebd_A | 309 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 100.0 | |
| 1ub7_A | 322 | 3-oxoacyl-[acyl-carrier protein] synthase; fatty a | 100.0 | |
| 3sqz_A | 425 | Putative hydroxymethylglutaryl-COA synthase; thiol | 100.0 | |
| 1u6e_A | 335 | 3-oxoacyl-[acyl-carrier-protein] synthase III; tra | 100.0 | |
| 1xpm_A | 396 | 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s | 100.0 | |
| 2p8u_A | 478 | Hydroxymethylglutaryl-COA synthase, cytoplasmic; h | 100.0 | |
| 2f82_A | 450 | HMG-COA synthase; HMGS1, transferase; 2.10A {Brass | 100.0 | |
| 2wya_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 100.0 | |
| 3lma_A | 347 | Stage V sporulation protein AD (spovad); NESG, str | 99.89 | |
| 3ho9_A | 427 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, | 99.8 | |
| 3o04_A | 413 | LMO2201 protein, beta-keto-acyl carrier protein sy | 99.79 | |
| 1tqy_A | 424 | Beta-ketoacyl synthase/acyl transferase; alpha-bet | 99.79 | |
| 2gqd_A | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli | 99.78 | |
| 4e1l_A | 395 | Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, | 99.78 | |
| 3ss6_A | 394 | Acetyl-COA acetyltransferase; structural genomics, | 99.78 | |
| 1j3n_A | 408 | 3-oxoacyl-(acyl-carrier protein) synthase II; cond | 99.77 | |
| 4dd5_A | 396 | Acetyl-COA acetyltransferase; structural genomics, | 99.77 | |
| 3kzu_A | 428 | 3-oxoacyl-(acyl-carrier-protein) synthase II; seat | 99.77 | |
| 1e5m_A | 416 | KAS II, beta ketoacyl acyl carrier protein synthas | 99.74 | |
| 2gp6_A | 434 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol | 99.74 | |
| 2iwz_A | 438 | 3-oxoacyl-[acyl-carrier-protein] synthase; mitocho | 99.73 | |
| 1ox0_A | 430 | Beta ketoacyl-acyl carrier protein synthase; trans | 99.73 | |
| 1tqy_B | 415 | Actinorhodin polyketide putative beta-ketoacyl SY; | 99.72 | |
| 4ewg_A | 412 | Beta-ketoacyl synthase; ssgcid, structural genomic | 99.7 | |
| 3svk_A | 407 | Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, | 99.7 | |
| 4ddo_A | 451 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci | 99.69 | |
| 3goa_A | 387 | 3-ketoacyl-COA thiolase; metabolism, fatty acid, p | 99.68 | |
| 2ix4_A | 431 | 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke | 99.67 | |
| 2wge_A | 416 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta | 99.66 | |
| 1ulq_A | 401 | Putative acetyl-COA acetyltransferase; structural | 99.66 | |
| 2vu1_A | 392 | Acetyl-COA acetyltransferase; acyltransferase, PHB | 99.66 | |
| 1wl4_A | 397 | Acetyl-coenzyme A acetyltransferase 2; thiolase fo | 99.65 | |
| 1wdk_C | 390 | 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame | 99.62 | |
| 2vba_A | 406 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop | 99.62 | |
| 3mqd_A | 428 | Beta-ketoacyl synthase; ssgcid, ALS collaborative | 99.61 | |
| 2ib8_A | 395 | Acetyl-COA acetyltransferase; thiolase fold, potas | 99.61 | |
| 2iik_A | 418 | 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m | 99.6 | |
| 1afw_A | 393 | 3-ketoacetyl-COA thiolase; fatty acid metabolism; | 99.58 | |
| 2wu9_A | 442 | 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o | 99.58 | |
| 2qo3_A | 915 | Eryaii erythromycin polyketide synthase modules 3; | 99.58 | |
| 2hg4_A | 917 | DEBS, 6-deoxyerythronolide B synthase; ketosynthas | 99.57 | |
| 3hhd_A | 965 | Fatty acid synthase; transferase, multienzyme, meg | 99.52 | |
| 4egv_A | 520 | Acetyl-COA acetyltransferase; NEW SUB-family, thio | 99.21 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 99.06 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.79 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 98.41 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 98.33 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 98.33 | |
| 3il3_A | 323 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 93.6 | |
| 4ewp_A | 350 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans | 93.03 | |
| 1mzj_A | 339 | Beta-ketoacylsynthase III; beta-ketosynthase, arom | 92.95 | |
| 2x3e_A | 331 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, | 92.46 | |
| 1u6e_A | 335 | 3-oxoacyl-[acyl-carrier-protein] synthase III; tra | 92.38 | |
| 3s21_A | 345 | 3-oxoacyl-[ACP] synthase III; non-decarboxylative | 91.98 | |
| 3lma_A | 347 | Stage V sporulation protein AD (spovad); NESG, str | 91.94 | |
| 3h78_A | 359 | PQS biosynthetic enzyme; PQSD, anthranilic acid, a | 91.92 | |
| 4efi_A | 354 | 3-oxoacyl-(acyl-carrier protein) synthase; structu | 91.8 | |
| 3gwa_A | 365 | 3-oxoacyl-(acyl-carrier-protein) synthase III; str | 91.63 | |
| 4dfe_A | 333 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci | 91.61 | |
| 1zow_A | 313 | 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB | 91.22 | |
| 1hnj_A | 317 | Beta-ketoacyl-acyl carrier protein synthase III; F | 91.1 | |
| 2ebd_A | 309 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 90.58 | |
| 1ub7_A | 322 | 3-oxoacyl-[acyl-carrier protein] synthase; fatty a | 90.46 | |
| 1u0m_A | 382 | Putative polyketide synthase; type III polyketide | 88.1 | |
| 1ted_A | 393 | PKS18; thiolase fold, substrate binding tunnel, tr | 87.9 | |
| 1ulq_A | 401 | Putative acetyl-COA acetyltransferase; structural | 87.86 | |
| 3s3l_A | 357 | CERJ; acyltransferase, FABH homologue, KS III homo | 87.77 | |
| 4e1l_A | 395 | Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, | 87.51 | |
| 3svk_A | 407 | Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, | 86.67 | |
| 2vu1_A | 392 | Acetyl-COA acetyltransferase; acyltransferase, PHB | 86.31 | |
| 3ss6_A | 394 | Acetyl-COA acetyltransferase; structural genomics, | 85.94 | |
| 3led_A | 392 | 3-oxoacyl-acyl carrier protein synthase III; struc | 84.7 | |
| 4dd5_A | 396 | Acetyl-COA acetyltransferase; structural genomics, | 84.25 | |
| 3tsy_A | 979 | Fusion protein 4-coumarate--COA ligase 1, resvera | 82.95 | |
| 1wl4_A | 397 | Acetyl-coenzyme A acetyltransferase 2; thiolase fo | 82.65 | |
| 2h84_A | 374 | Steely1; thiolase-fold, type III polyketide syntha | 81.92 | |
| 1wdk_C | 390 | 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame | 80.24 |
| >4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-58 Score=473.40 Aligned_cols=330 Identities=18% Similarity=0.245 Sum_probs=277.8
Q ss_pred cCCCceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHh
Q 010144 80 KRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFS 159 (517)
Q Consensus 80 ~~~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~ 159 (517)
.||...+|+++|+|+|++ +|+|+|+.+.++.+ ++ +|.+++||++||++.++ |++++|
T Consensus 9 ~~~~~srI~g~g~ylP~~---~v~n~el~~~~~~~----~e------~I~~rtGI~~R~~a~~~-----e~~~~l----- 65 (350)
T 4ewp_A 9 ERPAASRIVAVGAYRPAN---LVPNEDLIGPIDSS----DE------WIRQRTGIVTRQRATAE-----ETVPVM----- 65 (350)
T ss_dssp CCCSEEEEEEEEEECCSC---EEEHHHHTTTTTCC----HH------HHHHHHCCSEEECCCSS-----CCHHHH-----
T ss_pred cCCCCCEEEEEEEEcCCC---eEcHHHHHHHhCCC----HH------HHHhccCceEEEEcCCC-----CCHHHH-----
Confidence 588889999999999999 99999998876542 33 78899999999998764 544444
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHH
Q 010144 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVN-VSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (517)
Q Consensus 160 ea~~la~~Aa~~aL~~agi~p~dID~LI~a-~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ 238 (517)
+++|+++||+++|++|+|||+||++ +++++..|+++++||++||++ ++.+||+++ ||+|++.||++|.++++
T Consensus 66 -----a~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LGl~-~~~a~di~~-~C~g~~~aL~~A~~~i~ 138 (350)
T 4ewp_A 66 -----AVGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIGAT-PAPAYDVSA-ACAGYCYGVAQADALVR 138 (350)
T ss_dssp -----HHHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTTCT-TSCEEEEEC-GGGHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhCCC-CceEEEeec-chhhHHHHHHHhhhhhh
Confidence 7999999999999999999999997 468899999999999999998 678999996 99999999999999999
Q ss_pred cCCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccccceeeccc
Q 010144 239 TYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVED 318 (517)
Q Consensus 239 ag~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~~~~~~ 318 (517)
+++.++||||++|.+|. +.++.|++. ..+|||||+|+||++.+.. ++....+++|+..++.+..+.+
T Consensus 139 ~g~~~~~Lvv~~E~~s~-~~d~~~~~~---~~lfgDGA~A~vl~~~~~~---------~~~~~~~~sdg~~~~~~~~~~~ 205 (350)
T 4ewp_A 139 SGTARHVLVVGVERLSD-VVDPTDRSI---SFLLGDGAGAVIVAASDEP---------GISPSVWGSDGERWSTISMTHS 205 (350)
T ss_dssp TTSCSEEEEEEEEEGGG-GCCTTCTTT---GGGBCEEEEEEEEEEESSC---------CBCCCEEEECGGGTTSEEESSC
T ss_pred CCCccceeEeeeeecee-ccccccccc---ccccccchheeeeecccCC---------CccceeeeecccccceeeecCC
Confidence 99999999999999998 456677765 7899999999999987653 2345667788887776665432
Q ss_pred cCCCCCcccchhHHHHHHHHHhhh-----hh-----hcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCc
Q 010144 319 QQGHPGFRLTKQLTKAAALAFTMN-----LQ-----VLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNL 388 (517)
Q Consensus 319 ~~g~~g~~ls~~~~~~~~~~~~~~-----i~-----~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~ 388 (517)
+ . ..++.... .... +. ....+.|++.++|++++..+++.+.++| +++|+++
T Consensus 206 ~-----~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~~~i~~~L-------~~~gl~~-- 266 (350)
T 4ewp_A 206 Q-----L----ELRDAVEH-ARTTGDASAITGAEGMLWPTLRQDGPSVFRWAVWSMAKVAREAL-------DAAGVEP-- 266 (350)
T ss_dssp H-----H----HHHHHHHH-HHHHSCCTTTTTCSSCSSCCEEECHHHHHHHHHHTHHHHHHHHH-------HHHTCCG--
T ss_pred c-----c----ccCccccc-ccccCCccccccccccccceeEehhHHHHHHHHHhhhHHHHHHH-------HhhcCCh--
Confidence 1 0 11111100 0000 00 0113578899999999999999999998 8999996
Q ss_pred ccccceeecCCCChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEEEechhHHhh
Q 010144 389 KAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCN 468 (517)
Q Consensus 389 ~~did~~~~Hq~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~VlliafG~G~t~~ 468 (517)
+|||+|++||+|+++++.+++.||+|++++. ..++++||||||||+|++|++++++|++++||+|+++|||+|++|+
T Consensus 267 -~did~~v~Hq~~~~i~~~~~~~Lgl~~~~~~--~~~l~~~GNtssasi~~~L~~~~~~g~~~~Gd~vll~~fG~G~t~~ 343 (350)
T 4ewp_A 267 -EDLAAFIPHQANMRIIDEFAKQLKLPESVVV--ARDIADAGNTSAASIPLAMHRLLEENPELSGGLALQIGFGAGLVYG 343 (350)
T ss_dssp -GGEEEEEECCSCHHHHHHHHHHTTCCTTSEE--CCTHHHHCBCGGGHHHHHHHHHHHHCGGGTTSEEEEEEEETTTEEE
T ss_pred -hHhceEEecCCCHHHHHHHHHHcCcChHhEE--ecccccccchHHHHHHHHHHHHHHhCCCCCcCEEEEEEEchhhEeE
Confidence 9999999999999999999999999999975 3689999999999999999999999999999999999999999999
Q ss_pred eeeeEE
Q 010144 469 NCVWEV 474 (517)
Q Consensus 469 a~vlr~ 474 (517)
+++|||
T Consensus 344 ~~vlr~ 349 (350)
T 4ewp_A 344 AQVVRL 349 (350)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 999998
|
| >3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-53 Score=443.38 Aligned_cols=338 Identities=17% Similarity=0.249 Sum_probs=279.1
Q ss_pred CCCceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhh
Q 010144 81 RGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSE 160 (517)
Q Consensus 81 ~~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~e 160 (517)
+.++++|.++|+|+|++ +++|+++.+.++.. ++ ++|.+++||++|+++.++ ++.
T Consensus 27 ~~~~v~I~gig~~lP~~---~v~n~~l~~~~~~~---~~------~~i~~~tGI~~R~~a~~~-----~~~--------- 80 (365)
T 3gwa_A 27 HPPRAAIADIAGHLPEQ---VLTNDVLAQLYPDW---PA------EKILAKTGIRERRIAAPR-----ETA--------- 80 (365)
T ss_dssp --CEEEEEEEEEECCSE---EEEHHHHHHHCTTC---CH------HHHHHHHCCCEEEECCTT-----CCH---------
T ss_pred eeccEEEEEEEEeCCCc---EEcHHHHHHHccCC---CH------HHHHHhcCccEEEECCCC-----CCH---------
Confidence 45679999999999999 99999999876321 22 378999999999998653 333
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHc
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~a 239 (517)
.+|+.+|+++||+++|++|+|||.||+++ ++++..|+++.+|+++||++++++++++++ +|+|++.||.+|.+++++
T Consensus 81 -~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~-~C~s~~~Al~~A~~~i~~ 158 (365)
T 3gwa_A 81 -ADLAYEAARKLFAQGAVGADQVDFVILCTQAPDYVLPTSACMLQHRLGIPTHAGALDVNL-GCSGYVYGLSLAKGLVET 158 (365)
T ss_dssp -HHHHHHHHHHHHHTTSCCGGGCCEEEEEESSCSCSBSCHHHHHHHHTTCCTTSEEEEEEC-STTHHHHHHHHHHHHHHT
T ss_pred -HHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCCCCceEEEecc-cChHHHHHHHHHHHHHHc
Confidence 35589999999999999999999999975 578889999999999999987899999995 999999999999999999
Q ss_pred CCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccccceeecccc
Q 010144 240 YKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQ 319 (517)
Q Consensus 240 g~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~~~~~~~ 319 (517)
|+.++||||++|.+|. ..++.||.+ ..+|||||+|+||++++.... +++.+++.+|+..++.+..+.++
T Consensus 159 g~~~~vLvvg~e~~s~-~~~~~dr~~---~~lfGDGAaA~vl~~~~~~~~-------~i~~~~~~s~g~~~~~~~~~~gg 227 (365)
T 3gwa_A 159 GAARCVLLLTADTYSK-YLHPLDKSV---RTLFGDGASATAVIAEHGELE-------RIGPFVFGTDGRGAPNLIVKAGL 227 (365)
T ss_dssp TSCSEEEEEEEECGGG-GSCTTCHHH---HTTBCCEEEEEEEEEECSSSC-------SEEEEEEEECGGGGGGEEECSSS
T ss_pred CCCCEEEEEEEchhhc-cCCcccccc---cccccceeEEEEEEecCCCCC-------ceEEEEEEEcCCCCCeEEecCCC
Confidence 9999999999999998 345567764 679999999999998765311 24567788888888877766543
Q ss_pred CCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCC
Q 010144 320 QGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHP 399 (517)
Q Consensus 320 ~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq 399 (517)
... +.+.+.+... ......++....+.|++.++|+++.+.+++.+.++| +++|+++ +|||+|++||
T Consensus 228 ~~~---p~~~~~~~~~-~~~~~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~~L-------~~~gl~~---~did~~v~Hq 293 (365)
T 3gwa_A 228 FRE---PKSADSAREH-EDASGNVRTDEHLYMNGAEVMAFSLAEVPRAADRLL-------ALAGEPR---ENIDCFVLHQ 293 (365)
T ss_dssp SSS---CCCTGGGCCE-ECTTSCEECTTSEEECHHHHHHHHHHHHHHHHHHHH-------HHHTCCG---GGCSEEEECC
T ss_pred cCC---CCcccccccc-cccccccccccceEeccHHHHHHHHHHHHHHHHHHH-------HHcCCCH---HHCCEEEEcC
Confidence 221 1111100000 000001111234677889999999999999999998 8999995 9999999999
Q ss_pred CChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEEEechhHHhheeeeEE
Q 010144 400 GGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEV 474 (517)
Q Consensus 400 ~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~VlliafG~G~t~~a~vlr~ 474 (517)
+|+++++.+++.||+++|++ ..++++||||||||+|++|++++++|++++||+|++++||+|++|+++++||
T Consensus 294 ~n~~i~~~~~~~Lgl~~ek~---~~~l~~~GNtssAsipl~L~~~~~~g~~~~Gd~vll~~fG~G~t~~~~ll~~ 365 (365)
T 3gwa_A 294 ANRFMLDALRKKMKIPEHKF---PVLMEHCGNTVSSTLPLALETMRANGTLARGMRLMLLGFGVGYSWAGCLVNF 365 (365)
T ss_dssp CCHHHHHHHHHHHTCCGGGS---CCCCTTTCBCGGGHHHHHHHHHHHTTCCCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred CCHHHHHHHHHHhCCCHHHH---HHHHhcccchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEehhheeEEEEEEC
Confidence 99999999999999999999 5799999999999999999999999999999999999999999999999996
|
| >3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-53 Score=432.64 Aligned_cols=317 Identities=18% Similarity=0.280 Sum_probs=271.7
Q ss_pred CCCceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhh
Q 010144 81 RGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSE 160 (517)
Q Consensus 81 ~~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~e 160 (517)
..++-+|+++|+|+|++ +++|+++.+.++.. ++ +|.+++||++|+++.++ ++.
T Consensus 6 ~~~~~~~~~~g~ylP~~---~v~n~~l~~~~~~~----~~------~i~~~tGi~~R~~a~~~-----~~~--------- 58 (323)
T 3il3_A 6 HHMNSRILSTGSYLPSH---IRTNADLEKMVDTS----DE------WIVTRSGIRERRIAAED-----ETV--------- 58 (323)
T ss_dssp --CEECCCEEEEECCSC---EEEHHHHHTTSSCC----HH------HHHHHTCCCEEECCCTT-----CCH---------
T ss_pred ccccCceeEEEEECCCc---eEcHHHHHHHhCCC----HH------HHHHhcCCcEEEECCCC-----CCH---------
Confidence 34677899999999999 99999999876532 32 78899999999998653 433
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHc
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~a 239 (517)
.+|+.+|+++||+++|++|+|||.||+++ ++++..|+++.+|+++||++ +++++++++ +|+|++.||.+|.+++++
T Consensus 59 -~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~-~~~~~~v~~-~C~s~~~al~~A~~~i~~ 135 (323)
T 3il3_A 59 -ATMGFEAAKNAIEAAQINPQDIELIIVATTSHSHAYPSAACQVQGLLNID-DAISFDLAA-ACTGFVYALSVADQFIRA 135 (323)
T ss_dssp -HHHHHHHHHHHHHHHCCCGGGCCEEEEECSCCSCSSSCHHHHHHHHTTCS-SCEEEEECC-GGGHHHHHHHHHHHHHHT
T ss_pred -HHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCccHHHHHHHHhCCC-CccEEEECC-ccHHHHHHHHHHHHHHHC
Confidence 35589999999999999999999999985 57788999999999999996 799999996 999999999999999999
Q ss_pred CCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccccceeecccc
Q 010144 240 YKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQ 319 (517)
Q Consensus 240 g~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~~~~~~~ 319 (517)
|+.++||||++|.+|. ..++.|+.+ ..+|||||+|+||++++.. +++.++..+++..++.++.+.+.
T Consensus 136 g~~~~vLvvg~e~~s~-~~~~~d~~~---~~lfGDGA~A~vl~~~~~~---------~i~~~~~~s~g~~~~~~~~~g~~ 202 (323)
T 3il3_A 136 GKVKKALVIGSDLNSR-KLDETDRST---VVLFGDGAGAVILEASEQE---------GIISTHLHASADKNNALVLAQPE 202 (323)
T ss_dssp TSCSEEEEEEEEEGGG-SCCTTCTTT---TTTBCEEEEEEEEEEESSC---------CEEEEEEEECCCCSCSEECCCCC
T ss_pred CCCCEEEEEEeecccc-ccCcccccc---ccccccceEEEEEEEcCCC---------CeEEEEEEEcCCCcceEEECCCC
Confidence 9999999999999998 345667664 7899999999999987532 35667778888877776654210
Q ss_pred CCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCC
Q 010144 320 QGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHP 399 (517)
Q Consensus 320 ~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq 399 (517)
. | ....+.+.|++.++|+++++.+++.+.+++ +++|+++ +|||+|++||
T Consensus 203 ~-----------~----------~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l-------~~~gl~~---~did~~v~Hq 251 (323)
T 3il3_A 203 R-----------G----------IEKSGYIEMQGNETFKLAVRELSNVVEETL-------LANNLDK---KDLDWLVPHQ 251 (323)
T ss_dssp T-----------T----------CSSCSCCEECHHHHHHHHHHHHHHHHHHHH-------HTTTCCT---TTCCEEEECC
T ss_pred C-----------C----------CCCCCcEEEcCHHHHHHHHHHHHHHHHHHH-------HHcCCCH---HHCCEEEEcC
Confidence 0 0 001123456778999999999999999988 8899996 8999999999
Q ss_pred CChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEEEechhHHhheeeeEE
Q 010144 400 GGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEV 474 (517)
Q Consensus 400 ~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~VlliafG~G~t~~a~vlr~ 474 (517)
+|+++++.+++.||+++|++ ..++++||||||||+|++|++++++|++++||+|++++||+|++|+++++||
T Consensus 252 ~~~~i~~~~~~~lgl~~ek~---~~~l~~~GNt~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~~l~~ 323 (323)
T 3il3_A 252 ANLRIITATAKKLEMDMSQV---VVTLDKYANNSAATVPVALDEAIRDGRIQRGQLLLLEAFGGGWTWGSALVRF 323 (323)
T ss_dssp SCHHHHHHHHHHTTCCGGGB---CCCHHHHCBCGGGHHHHHHHHHHHTTSSCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred CCHHHHHHHHHHcCcCHHHh---hccHhhcCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEehhheeEEEEEEC
Confidence 99999999999999999999 5789999999999999999999999999999999999999999999999996
|
| >3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-52 Score=429.60 Aligned_cols=317 Identities=15% Similarity=0.247 Sum_probs=269.9
Q ss_pred CCceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhhH
Q 010144 82 GQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEM 161 (517)
Q Consensus 82 ~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~ea 161 (517)
+++++|.++|+|+|++ +++|+++.+.++.. + ++|.+++||++||++.+. + +
T Consensus 2 ~~~~~I~~~g~~lP~~---~v~n~~~~~~~~~~----~------~~i~~~~Gi~~R~~a~~~-----e-----------~ 52 (321)
T 3il6_A 2 KNYARISCTSRYVPEN---CVTNHQLSEMMDTS----A------AWIHSRTGISERRIVTQE-----N-----------T 52 (321)
T ss_dssp CCEEEEEEEEEECCSC---EEEHHHHHHHTTSC----H------HHHHHHHSCSEEECCSSC-----C-----------H
T ss_pred CCcEEEEEEEEECCCc---EEcHHHHHHHhCCC----h------hhhhhhcCceEEEECCCC-----C-----------H
Confidence 4679999999999999 99999999887542 3 268899999999987653 2 3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcC
Q 010144 162 DEIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTY 240 (517)
Q Consensus 162 ~~la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag 240 (517)
.+|+.+|+++||+++|++|+|||.||+++ ++++..|+++.+|+++||++ +++++++++ +|+|++.||.+|.+++++|
T Consensus 53 ~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~-~~~~~~v~~-aC~s~~~al~~A~~~i~~g 130 (321)
T 3il6_A 53 SDLCHQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGAT-EAFAFDISA-ACSGFVYALSMAEKLVLSG 130 (321)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCT-TCEEEEECC-GGGHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCcCCCcHHHHHHHHcCCC-CceEEEeCc-ccHHHHHHHHHHHHHHHCC
Confidence 45689999999999999999999999985 57889999999999999998 599999995 9999999999999999999
Q ss_pred CCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccccceeeccccC
Q 010144 241 KNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQ 320 (517)
Q Consensus 241 ~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~~~~~~~~ 320 (517)
+.++||||++|.+|. +.+++||.+ ..+|||||+|+||+++++. +++.+++.+|++.+++++.+.++.
T Consensus 131 ~~~~vLvvg~e~~s~-~~~~~dr~~---~~lfGDGA~A~vl~~~~~~---------~i~~~~~~s~~~~~~~~~~~~~~~ 197 (321)
T 3il6_A 131 RYQTGLVIGGETFSK-MLDWTDRST---AVLFGDGAAGVLIEAAETP---------HFLNEKLQADGQRWTALTSGYTIN 197 (321)
T ss_dssp SCCCEEEEEEECGGG-GSCTTCTTT---GGGBCCEEEEEEEEEESSC---------CEEEEEEEECGGGGGGEECCCCCC
T ss_pred CCCEEEEEEEccccc-cCCcccccc---ceeeccccEEEEEEEcCCC---------CEEEEEEEEcCCCCCeEEeCCCCC
Confidence 999999999999997 556677764 7899999999999987643 256677888988888777654321
Q ss_pred CCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCC
Q 010144 321 GHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPG 400 (517)
Q Consensus 321 g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~ 400 (517)
.. +...+. ....+.+.|++.++|+++.+.+++.+.++| + + +|||+|++||+
T Consensus 198 ~~---~~~~~~-----------~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l-------~-----~---~did~~v~Hq~ 248 (321)
T 3il6_A 198 ES---PFYQGH-----------KQASKTLQMEGRSIFDFAIKDVSQNILSLV-------T-----D---ETVDYLLLHQA 248 (321)
T ss_dssp CS---TTCCCC-----------CCCCCSCEECHHHHHHHHHHHHHHHHHTTC-------C-----G---GGCSEEEECCS
T ss_pred CC---CCCccc-----------cccccceeechHHHHHHHHHHHHHHHHHHc-------C-----c---ccCCEEEEcCC
Confidence 11 111100 001134567789999999999999988876 2 3 89999999999
Q ss_pred ChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCC--CEEEEEEechhHHhheeeeEE
Q 010144 401 GRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKG--DRILMISLGAGFKCNNCVWEV 474 (517)
Q Consensus 401 ~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~G--d~VlliafG~G~t~~a~vlr~ 474 (517)
|+++++.+++.||+++|++ ..++++||||||||+|++|++++++|++++| |+|++++||+|++|+++++|+
T Consensus 249 ~~~i~~~~~~~lgl~~ek~---~~~l~~~GNt~sasi~~~L~~~~~~g~~~~G~~d~vll~~fG~G~t~~~~~l~v 321 (321)
T 3il6_A 249 NVRIIDKIARKTKISREKF---LTNMDKYGNTSAASIPILLDEAVENGTLILGSQQRVVLTGFGGGLTWGSLLLTL 321 (321)
T ss_dssp CHHHHHHHHHHHTCCGGGB---CCCGGGTCBCGGGHHHHHHHHHHHTTSSCTTSCCEEEEEEEETTTEEEEEEEEC
T ss_pred CHHHHHHHHHHcCcCHHHh---hhhHhhcccHHHHHHHHHHHHHHHhCCCCCCCCCEEEEEEEehhheeEEEEEEC
Confidence 9999999999999999999 5799999999999999999999999999999 999999999999999999984
|
| >4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-52 Score=428.94 Aligned_cols=323 Identities=17% Similarity=0.253 Sum_probs=272.5
Q ss_pred CceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhhHH
Q 010144 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMD 162 (517)
Q Consensus 83 ~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~ea~ 162 (517)
++++|.++|+|+|++ +++++++.+.+...+ .+.. .++|.+++||++|++..++ ++. .
T Consensus 10 m~v~I~g~g~~lP~~---~v~~~~l~~~l~~~~-~~~~----~~~i~~rtgi~~r~~~~~~-----~~~----------~ 66 (333)
T 4dfe_A 10 IYSRVLGTGSYLPPN---RVTNQDLAKRLAEQG-IETS----DEWIVARTGIHARYFAEPD-----VTT----------S 66 (333)
T ss_dssp CEEEEEEEEEECCSE---EEEHHHHHHHHC----CCCC----HHHHHHHHCCSEEEECCTT-----CCH----------H
T ss_pred cceEEEEEEEECCCc---EEcHHHHHHHhcccc-CCCC----HHHhHHhcCceEEEEcCCC-----CCH----------H
Confidence 589999999999999 999999999853321 1111 1378899999999987653 333 3
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCC
Q 010144 163 EIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYK 241 (517)
Q Consensus 163 ~la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~ 241 (517)
+|+.+|+++||+++|++|+|||.||+++ ++++..|+++.+|+++||++++++++++++ +|+|++.||.+|.++|++|+
T Consensus 67 ~la~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~~-~C~s~~~al~~A~~~i~~g~ 145 (333)
T 4dfe_A 67 DLAFIASQRAIEAADIDPQSIDLIIVATSTPDFVFPSTACLLQNKLGIRNHGAAFDVQA-VCSGFAYAVATADSFIRSGQ 145 (333)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHTTCCSCCEEEEEEC-GGGHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHhCCCCCCcEEEeCc-ccHHHHHHHHHHHHHHHcCC
Confidence 5589999999999999999999999975 577889999999999999976899999985 99999999999999999999
Q ss_pred CCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccccceeeccccCC
Q 010144 242 NKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQG 321 (517)
Q Consensus 242 ~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~~~~~~~~g 321 (517)
.++||||++|.+|.. .++.|+.. ..+|||||+|+||++.++. +++.++..+|+..++.++.+.+...
T Consensus 146 ~~~vLvvg~e~~s~~-~~~~d~~~---~~lfGDGA~A~vl~~~~~~---------~i~~~~~~~~g~~~~~~~~~~~~~~ 212 (333)
T 4dfe_A 146 HRTALVIGAETFSRI-LDFKDRTT---CVLFGDGAGAVILQASDEP---------GVLASALHADGSHSNILCTPGNVNG 212 (333)
T ss_dssp CSEEEEEEEEEGGGG-CCTTCTTT---TTTBCEEEEEEEEEEESSC---------SEEEEEEEECGGGGGGEEBCEEEET
T ss_pred CCEEEEEEeeccccc-cCcccccc---eeeeccccEEEEEEEcCCC---------CeEEEEEEEccCCcCeEEECCCCCC
Confidence 999999999999973 45566654 6899999999999987642 3566777888877776665432100
Q ss_pred CCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCC
Q 010144 322 HPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGG 401 (517)
Q Consensus 322 ~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~ 401 (517)
. .+...+.+.|++.++|++..+.+++.+.+++ +++|+++ +|||+|++||+|
T Consensus 213 -------~------------~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l-------~~~gl~~---~did~~~~Hq~~ 263 (333)
T 4dfe_A 213 -------G------------VVSGSAFLHMDGQAVFKLAVNVLEKVAVEAL-------EKANLSA---EQIDWLIPHQAN 263 (333)
T ss_dssp -------T------------EEEECCSCEECHHHHHHHHHHHHHHHHHHHH-------HHTTCCG---GGCSEEEECCSC
T ss_pred -------c------------ccccCcceeeccHHHHHHHHHHHHHHHHHHH-------HHcCCCH---HHCCEEEEcCCC
Confidence 0 0111234567788999999999999999988 8999986 999999999999
Q ss_pred hHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEEEechhHHhheeeeEE
Q 010144 402 RAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEV 474 (517)
Q Consensus 402 ~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~VlliafG~G~t~~a~vlr~ 474 (517)
+++++.+++.||+++|++ ..++++||||+|||+|++|++++++|++++||+|++++||+|++|+++++||
T Consensus 264 ~~i~~~~~~~lgl~~~~~---~~~l~~~GNt~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~ll~~ 333 (333)
T 4dfe_A 264 IRIMQSTCRKLGLPQERM---IVTVGEHGNTSAASIPLALDVAVRDGRIKRGQNVLIEGVGGGFTWGASVIRY 333 (333)
T ss_dssp HHHHHHHHHHTTCCGGGB---CCCHHHHCBCGGGHHHHHHHHHHHTTCSCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHHHHHhCCCHHHh---hhhHHhcCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhheeEEEEEEC
Confidence 999999999999999999 5689999999999999999999999999999999999999999999999996
|
| >4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-53 Score=438.13 Aligned_cols=333 Identities=14% Similarity=0.145 Sum_probs=278.6
Q ss_pred CCCceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhh
Q 010144 81 RGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSE 160 (517)
Q Consensus 81 ~~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~e 160 (517)
|..+++|.++|+|+|++ +++|+++.+.++.. + .++|.+++||++|+++.++ ++.
T Consensus 13 ~~~~v~I~~ig~~lP~~---~v~n~~l~~~~~~~----~-----~~~i~~~tGI~~R~~a~~~-----~~~--------- 66 (354)
T 4efi_A 13 RTQGARIAGVVSCVPSK---QVDNDYFVERFDAS----A-----VRDVVKMIGVNRRRWADAQ-----TSA--------- 66 (354)
T ss_dssp EEESEEEEEEEEEECSC---EEEGGGGTTTSCHH----H-----HHHHHHHHCCSEEECCCTT-----CCH---------
T ss_pred EEcceEEEEEEEECCCc---EEcHHHHHHHhCCC----c-----HHHHHHhcCCeEEEEcCCC-----CCH---------
Confidence 34579999999999999 99999998765321 1 2478999999999997653 333
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHc
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~a 239 (517)
.+|+.+|+++||+++|++|+|||.||+++ ++++..|+.+.+|+++||++++++++++++ +|+|++.||.+|.+++++
T Consensus 67 -~~La~~Aa~~aL~~agi~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~-aC~s~~~al~~A~~~i~~ 144 (354)
T 4efi_A 67 -GDLCRKAGEKLLAGLGWQADSIDALIFVSQTPNYRLPATAFVLQAELDLPASCLALDINL-GCSGYPQALWLGMNLIQT 144 (354)
T ss_dssp -HHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCCTTSEEEEECC-CTTHHHHHHHHHHHHHHT
T ss_pred -HHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCcCCCccEEeeCc-ccHHHHHHHHHHHHHHHC
Confidence 35589999999999999999999999985 577889999999999999976899999985 999999999999999999
Q ss_pred CCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccccceeecccc
Q 010144 240 YKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQ 319 (517)
Q Consensus 240 g~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~~~~~~~ 319 (517)
|+.++||||++|.+|. ..++.|+.. ..+|||||+|+||++++... .+..++.+++..++.++.+.++
T Consensus 145 g~~~~vLvvg~e~~s~-~~~~~d~~~---~~lfGDGA~A~vl~~~~~~~---------~~~~~~~s~g~~~~~~~~~~~g 211 (354)
T 4efi_A 145 GAAKRVLLAVGDTISK-MIDPTDRST---SLLFGDAGTMTALETSNGDA---------AAHFIIGADGKGARNLIVPSGG 211 (354)
T ss_dssp TSCSEEEEEEEECGGG-GCCTTCHHH---HTTBCCEEEEEEEEECCSCC---------EEEEEEEECGGGGGGEECCSSS
T ss_pred CCCCEEEEEEechhcc-cCCcccccc---ccccccceeEEEEeecCCCC---------ceEEEEEEcCCCcceEEecCCC
Confidence 9999999999999988 455667764 78999999999999876531 2456678888877777765432
Q ss_pred CCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCC
Q 010144 320 QGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHP 399 (517)
Q Consensus 320 ~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq 399 (517)
.. +.+++.+ ....++....+.|++.++|+++.+.+++.+.++| +++|+++ +|||+|++||
T Consensus 212 ~~----p~~~~~~------~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l-------~~~gl~~---~did~~v~Hq 271 (354)
T 4efi_A 212 FK----PYDAAAD------ERMAGKSPECLFMDGGEIFNFTLNAVPKLVSRTL-------DIAGRDK---DSYDAFLFHQ 271 (354)
T ss_dssp SS----CCCGGGC------GGGTTCCTTSCEECHHHHHHHHHHHHHHHHHHHH-------HHHTCCG---GGCSEEEECC
T ss_pred CC----CCccccc------cccccccccceEEccHHHHHHHHHHHHHHHHHHH-------HHcCCCH---HHCCEEEeCC
Confidence 11 1221110 0001122234567889999999999999999988 8999996 9999999999
Q ss_pred CChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEEEechhHHhheeeeEEecc
Q 010144 400 GGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKD 477 (517)
Q Consensus 400 ~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~VlliafG~G~t~~a~vlr~~~~ 477 (517)
+|+++++.+++.||+++|++ ..++++||||||||+|++|++++++|++++||+|++++||+|++|+++++||.+.
T Consensus 272 ~~~~i~~~~~~~Lgl~~ek~---~~~l~~~GNt~sasi~~~L~~~~~~g~~~~Gd~vll~~fG~G~t~~~~ll~~~~~ 346 (354)
T 4efi_A 272 ANLFMLKHLAKKAGLPAERV---PVNIGEYGNTSCASIPLLITTELKDRLKEETLQLGMFGFGVGYSWASAALAVGPL 346 (354)
T ss_dssp CCHHHHHHHHHHTTCCGGGS---CCCHHHHCBCGGGHHHHHHHHHSHHHHHHSCEEEEEEEEETTTEEEEEEEEECCC
T ss_pred CCHHHHHHHHHHhCcCHHHH---HHHHhhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEchhhhheeeEEEECCc
Confidence 99999999999999999999 5789999999999999999999999999999999999999999999999999653
|
| >3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-53 Score=452.18 Aligned_cols=363 Identities=15% Similarity=0.153 Sum_probs=270.4
Q ss_pred CCCceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCc--CCCCCCcc----H
Q 010144 81 RGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVV--EGREESPS----L 154 (517)
Q Consensus 81 ~~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~--~~~~~~~~----m 154 (517)
+.++++|.++|+|+|++ +++|+++.+..+....-+ ...+.+++|++++||++||++.+... ......++ +
T Consensus 28 ~~~~v~I~gigt~lP~~---~v~n~el~~~~~~~~~~~-~~~~~~~~i~~~tGI~~R~~~~~~~~p~~~~~~~ps~~~r~ 103 (465)
T 3e1h_A 28 GELGLSITGLGVQYPPY---SLGPDAIDILSKRYHPES-PAMKKVLAINRYTGIDQRSSIGNPDHPLVNKPNPPTVKELH 103 (465)
T ss_dssp CCCCEEEEEEEEECCSS---CCBCTHHHHHTCSSSCCC-HHHHHHHHHTTTSCCCCBCCSSCTTCGGGSSSSCCCHHHHH
T ss_pred CCCCEEEEEEEEECCCc---EEcHHHHHHHHHHhcccc-hhHHHHHHHHHhcCCceEEEeecccCcccccccCCCHHHHH
Confidence 56789999999999999 999999988765432212 23455667999999999999754211 00111233 3
Q ss_pred HHhHhhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHH
Q 010144 155 AEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQ 234 (517)
Q Consensus 155 ~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~ 234 (517)
..+.+++.+|+.+|+++||+++|++|+|||+||++|+.++..|+++++|+++||+++.+.+|||.++||+|++.||++|.
T Consensus 104 ~~~~~~a~~La~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~dv~~~~Csgg~~AL~~A~ 183 (465)
T 3e1h_A 104 EVFMSDGVPLAVEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELGLSDRLEKVLLHGIGCSGGLAALRTAA 183 (465)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCCCSSCHHHHHHHHHTCCTTCEEEEECSCGGGHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHhCCCCCeeEEEecCCcchHHHHHHHHHH
Confidence 44667889999999999999999999999999998766889999999999999998666699995459999999999999
Q ss_pred HHHHc----CCCCEEEEEEecCCCCCCCCC---------CCccccccccccccceEEEEEeeccccc--ccchhhcccee
Q 010144 235 QLFRT----YKNKLAIVVSTESMGPNWYCG---------REKSMMLSNILFRSGGCSMLLTNNRALK--HKAILKLNCLV 299 (517)
Q Consensus 235 ~lL~a----g~~~~aLVVs~E~~s~~~~~~---------~dr~~lv~~~lfGDGAAAvLLs~~~~~~--~~~~~~l~~i~ 299 (517)
+++++ |..++||||++|.+|.. +++ .|+ .++.+|||||+|+||++.+... .+..|++.+
T Consensus 184 ~~i~a~~~~G~~~~vLVvg~E~~S~~-~~~~~~~~~~~~~d~---~t~~LFGDGAaAvVl~~~~~~~~~~~~~~~l~~-- 257 (465)
T 3e1h_A 184 NLCLGHTARGKPARILVLALEVSTTM-VRSELESIDALQETR---IGIALFSDCASAVILSNGIGEAPGKPAIYDLLG-- 257 (465)
T ss_dssp HHHHHHHHTTCCCEEEEEEEECCGGG-HHHHHHHHHHHTCCC---CHHHHBCCEEEEEEEECCTTCCTTCCCSEEEEE--
T ss_pred HHHhcccccCCCCEEEEEEEeecchh-cCccccccccccccc---ccccccccceeEEEEEccCCCccccccceeecc--
Confidence 99997 88899999999999873 321 233 3589999999999999865421 112333322
Q ss_pred eeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchh
Q 010144 300 RTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPE 379 (517)
Q Consensus 300 ~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~ 379 (517)
......+...+.+.+.. ...|...|.+.++|+++...+++.+.++|
T Consensus 258 -~~~~~~p~~~~~~~~~~--------------------------~~~g~~~~~g~~V~~~a~~~v~~~i~~~L------- 303 (465)
T 3e1h_A 258 -WENRVIPDSEHDLGFDV--------------------------DPMGWKVVLSPRVPVLAKASLQPTYADLL------- 303 (465)
T ss_dssp -EEEEECTTCTTTEEEEE--------------------------ETTEEEEEECTTHHHHHHHHHHHHHHHHH-------
T ss_pred -ceEEEecCCccccCccc--------------------------cCCCceEecChHHHHHHHHHHHHHHHHHH-------
Confidence 21111111001111100 01112233456788888888888888877
Q ss_pred hh-------hCCCCCcccccceeecCCCChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHc--CCC
Q 010144 380 AV-------LGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAK--KRL 450 (517)
Q Consensus 380 ~~-------~g~~~d~~~did~~~~Hq~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~--g~i 450 (517)
++ +|+++ +|||+| +||+|++|++.++++||++++++..++.++++||||||||+|++|++++++ |++
T Consensus 304 ~~~g~~L~~agl~~---~DId~~-~Hqan~rIl~~v~~~Lgl~~ek~~~s~~~l~~yGNtsSASip~aL~~~~~~~~g~l 379 (465)
T 3e1h_A 304 SSLQDQLPSSYQKP---ADFDWA-MHPGGATILSGAESAMGLTPEHMRASYDRYINHGNSSSATIFSVLNRLREKDMDAL 379 (465)
T ss_dssp HHHGGGSCTTSCSG---GGSEEE-ECCSSHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHTSTTTTSC
T ss_pred HhccccccccCCCH---HHceEE-ecCCChHHHHHHHHHhCcCHHHhHHHHHHHhcceechHhHHHHHHHHHHHhccccc
Confidence 44 56774 899976 999999999999999999999998888999999999999999999999988 789
Q ss_pred CCC----CEEEEEEechhHHhheeeeEEeccCCCCCchhhhcccCCCC
Q 010144 451 KKG----DRILMISLGAGFKCNNCVWEVMKDLEDPNVWKDCIDRYPPK 494 (517)
Q Consensus 451 ~~G----d~VlliafG~G~t~~a~vlr~~~~~~~~~~w~~~~~~~~~~ 494 (517)
++| |+|++++||+|++|++++|||.++....++|-+| ||++
T Consensus 380 ~~Gg~~~d~vll~gfG~Glt~~~~llr~~~~~~~~~~~~~~---~~~~ 424 (465)
T 3e1h_A 380 APGGKVKEYVVGCAFGPGINVEMCMLKRRMNAPARTTTGLD---TPPE 424 (465)
T ss_dssp SSSSCCCSEEEEEEEETTTEEEEEEEEECCC-----------------
T ss_pred CCCCCCCCEEEEEEEhHHHhhhheeeEEeccccCCCCCCCC---CCCC
Confidence 988 9999999999999999999999977668899999 9993
|
| >3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-51 Score=425.33 Aligned_cols=330 Identities=14% Similarity=0.188 Sum_probs=272.5
Q ss_pred CCceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhhH
Q 010144 82 GQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEM 161 (517)
Q Consensus 82 ~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~ea 161 (517)
+++++|.++|+|+|++ +++++++.+.++. ++ ++|.+++||++|+++.++ ++..
T Consensus 23 ~~~~~I~~~g~~~P~~---~v~~~~l~~~~~~----~~------~~i~~~tGi~~R~~a~~~-----~~~~--------- 75 (359)
T 3h78_A 23 QGNPILAGLGFSLPKR---QVSNHDLVGRINT----SD------EFIVERTGVRTRYHVEPE-----QAVS--------- 75 (359)
T ss_dssp -CCCEEEEEEEECCSE---EEEHHHHTTTSSC----CH------HHHHHHHCCCEEEECCTT-----CCTH---------
T ss_pred CCCcEEEEEEEECCCc---eEcHHHHHHHhCC----CH------HHHHHhcCceEEEEcCCC-----CCHH---------
Confidence 4679999999999999 9999999987643 23 378899999999998663 4333
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcC
Q 010144 162 DEIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTY 240 (517)
Q Consensus 162 ~~la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag 240 (517)
+|+.+|+++||+++|++|+|||.||+++ ++++..|+++.+|+++||++ +++++++++ +|+|++.||.+|.++|++|
T Consensus 76 -~La~~Aa~~aL~~agl~~~dId~vi~~t~~~~~~~p~~a~~v~~~lGl~-~~~~~~v~~-aC~s~~~Al~~A~~~i~sG 152 (359)
T 3h78_A 76 -ALMVPAARQAIEAAGLLPEDIDLLLVNTLSPDHHDPSQACLIQPLLGLR-HIPVLDIRA-QASGLLYGLQMARGQILAG 152 (359)
T ss_dssp -HHHHHHHHHHHHHTTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHHTCC-SCCEEEEEC-GGGHHHHHHHHHHHHHHTT
T ss_pred -HHHHHHHHHHHHhcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCC-CCcEEEECC-HhHHHHHHHHHHHHHHHCC
Confidence 4479999999999999999999999985 57788999999999999997 799999996 9999999999999999999
Q ss_pred CCCEEEEEEecCCCCCCCCCCC--ccccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccccceeeccc
Q 010144 241 KNKLAIVVSTESMGPNWYCGRE--KSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVED 318 (517)
Q Consensus 241 ~~~~aLVVs~E~~s~~~~~~~d--r~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~~~~~~ 318 (517)
..++||||++|.+|. ..++.| +.+ ..+|||||+|+||++++... . +++.++..+++..++.+..+.+
T Consensus 153 ~~~~vLvvg~e~~S~-~~~~~d~~~~t---~~lfGDGAaA~vl~~~~~~~----~---~i~~~~~~s~g~~~~~~~~~~~ 221 (359)
T 3h78_A 153 LARHVLVVCGEVLSK-RMDCSDRGRNL---SILLGDGAGAVVVSAGESLE----D---GLLDLRLGADGNYFDLLMTAAP 221 (359)
T ss_dssp SCSEEEEEEEEECGG-GCCCSTTTHHH---HTTBCEEEEEEEEECCSCSS----S---EEEEEEEEECGGGGGGEEBCCS
T ss_pred CcCEEEEEEEchhcc-cCCcccccccc---cceecceeEEEEEEecCCCC----C---ceEEEEEEEccCccceEEeCCC
Confidence 999999999999998 345566 553 68999999999999876411 1 3566777888887776665531
Q ss_pred cCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecC
Q 010144 319 QQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLH 398 (517)
Q Consensus 319 ~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~H 398 (517)
+. .....+.+. .. ....+.+.|++.++|+++.+.+++.+.++| +++|+++ +|||+|++|
T Consensus 222 g~--~~~~~~~~~--~~-------~~~~~~~~m~g~~v~~~~~~~~~~~i~~~L-------~~~gl~~---~did~~v~H 280 (359)
T 3h78_A 222 GS--ASPTFLDEN--VL-------REGGGEFLMRGRPMFEHASQTLVRIAGEML-------AAHELTL---DDIDHVICH 280 (359)
T ss_dssp ST--TSSSTTCHH--HH-------HTTTTSCEECHHHHHHHHHHHHHHHHHHHH-------HHTTCCG---GGCSEEEEC
T ss_pred CC--ccCCccccc--cc-------cccCCceEeccHHHHHHHHHHHHHHHHHHH-------HHcCCCH---HHCCEEEEC
Confidence 11 011111110 00 011234567889999999999999999998 8999996 999999999
Q ss_pred CCChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEEEechhHHhheeeeEEeccC
Q 010144 399 PGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDL 478 (517)
Q Consensus 399 q~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~VlliafG~G~t~~a~vlr~~~~~ 478 (517)
|+|+++++.+++.||+++|++ ..++++||||+|||+|++|++++++ +++||+|++++||+|++|+++++||.+.+
T Consensus 281 q~n~~i~~~~~~~lgl~~ek~---~~~l~~~GNt~sAsi~l~L~~~~~~--l~~Gd~vll~~fG~G~t~~~~ll~~~~~~ 355 (359)
T 3h78_A 281 QPNLRILDAVQEQLGIPQHKF---AVTVDRLGNMASASTPVTLAMFWPD--IQPGQRVLVLTYGSGATWGAALYRKPEEV 355 (359)
T ss_dssp CSCHHHHHHHHHHHTCCGGGB---CCCHHHHCBCGGGHHHHHHHHHGGG--SCTTCEEEEEEEETTTEEEEEEEECC---
T ss_pred CCCHHHHHHHHHHhCcCHHHh---hhhhhcccchHHHHHHHHHHHHHHh--CCCCCEEEEEEEchhhhheeeeEEehhhh
Confidence 999999999999999999999 5689999999999999999999987 89999999999999999999999985544
|
| >3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-51 Score=428.99 Aligned_cols=354 Identities=14% Similarity=0.181 Sum_probs=271.9
Q ss_pred hcCCCceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCC--hHHHHHHHHHHHHhCCceeEeccCCCc---------CC
Q 010144 79 QKRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLG--LEEYRFLLKNMVSSGIGEETYGPRNVV---------EG 147 (517)
Q Consensus 79 ~~~~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~--~~~~~~~~ri~~~sGI~~r~~~~~~~~---------~~ 147 (517)
++...+++|.++|+|+|++ +++|+++.+.+......+ ++..+.+++|++++||++||++.+... ..
T Consensus 11 ~~~~~~~~I~~ig~~~P~~---~v~n~e~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~~~~~~~~~ 87 (393)
T 3ov2_A 11 QRAQGPATIMAIGTATPPN---LYEQSTFPDFYFRVTNSDDKQELKKKFRRMCEKTMVKKRYLHLTEEILKERPKLCSYK 87 (393)
T ss_dssp HSCSSCCEEEEEEEECCSC---EEEGGGHHHHHHHHTTCTTCHHHHHHHHHHHHHTCCCEEECSCCHHHHHHSGGGGSSS
T ss_pred cCCCCCeEEEEEEeeCCCc---ccCHHHHHHHHHHhhcccchHHHHHHHHHHHHhcCCceEEeecChhhhccCcccccCC
Confidence 3456779999999999999 999999999864322111 233456778999999999999765310 00
Q ss_pred CCC-CccHHHhHhhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCee-EEEecCCcchH
Q 010144 148 REE-SPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIK-AFNLSGMGCSA 225 (517)
Q Consensus 148 ~~~-~~~m~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~-~~dl~~mgCsg 225 (517)
.|+ ...+..+.+++.+|+.+|+++||+++|++|+|||+||++|+..+..|+++++|+++||+++.+. ++++++ ||+|
T Consensus 88 ~p~~~~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~t~~~~p~~a~~v~~~LGl~~~~~~~~~v~~-~C~g 166 (393)
T 3ov2_A 88 EASFDDRQDIVVEEIPRLAKEAAEKAIKEWGRPKSEITHLVFCSISGIDMPGADYRLATLLGLPLTVNRLMIYSQ-ACHM 166 (393)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSCCCBSCHHHHHHHHHTCCTTSEEEEEESC-CTTH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCCCCCHHHHHHHHcCCCCCcceeeEEcC-ccHH
Confidence 111 1235567788999999999999999999999999999986544789999999999999986654 899986 9999
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEEEecCCCCCCCCCCCc--cccccccccccceEEEEEeeccccc-ccchhhccceeeee
Q 010144 226 SVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGREK--SMMLSNILFRSGGCSMLLTNNRALK-HKAILKLNCLVRTH 302 (517)
Q Consensus 226 gl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~~~~~~dr--~~lv~~~lfGDGAAAvLLs~~~~~~-~~~~~~l~~i~~t~ 302 (517)
++.||.+|.+++++|+.++||||++|.+|.++.++.|+ +.+.+..+|||||+|+||++++... ..+.+++.......
T Consensus 167 ~~~al~~A~~~i~sg~~~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~~~~~~~~~ 246 (393)
T 3ov2_A 167 GAAMLRIAKDLAENNRGARVLVVACEITVLSFRGPNEGDFEALAGQAGFGDGAGAVVVGADPLEGIEKPIYEIAAAMQET 246 (393)
T ss_dssp HHHHHHHHHHHHHHSTTCEEEEEEEECGGGTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSCCTTTCCCSEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEEeccchhccCCcccchhhhcccccccCccEEEEEEecCCCcccCceeEEEecCcEE
Confidence 99999999999999999999999999998556666665 2234578999999999999865431 01112211100000
Q ss_pred eccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhcc-cccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhh
Q 010144 303 FGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLV-PKILPLREQFRYVIQSYYENRIRKSTSSTKPEAV 381 (517)
Q Consensus 303 ~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lg-pl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~ 381 (517)
. .++. +.+.+. ++..| .+.|. .++++++...+++.+.++| ++
T Consensus 247 ~-p~~~--~~~~~~--------------------------~~~~g~~~~~~-~~v~~~~~~~~~~~i~~~L-------~~ 289 (393)
T 3ov2_A 247 V-AESQ--GAVGGH--------------------------LRAFGWTFYFL-NQLPAIIADNLGRSLERAL-------AP 289 (393)
T ss_dssp C-TTCT--TSEEEE--------------------------EETTEEEEEEC-TTHHHHHHTTSHHHHHHHH-------GG
T ss_pred e-cCCc--ccCcee--------------------------eeCCceEEEEC-cHHHHHHHHHHHHHHHHHH-------HH
Confidence 0 0000 000000 00000 11222 5677777777888888888 78
Q ss_pred hCCCCCcccccceeecCCCChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHc----CCCCCC---C
Q 010144 382 LGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAK----KRLKKG---D 454 (517)
Q Consensus 382 ~g~~~d~~~did~~~~Hq~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~----g~i~~G---d 454 (517)
+|+++ .+|+ +|++||+|+++++.++++||+++|++..+++++++||||||||+|++|+++.++ |++++| |
T Consensus 290 ~gl~~--~~di-~~v~Hq~n~~i~~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip~~L~~~~~~~~~~g~~~~G~~~d 366 (393)
T 3ov2_A 290 LGVRE--WNDV-FWVAHPGNWAIIDAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGRSTTGDGLQ 366 (393)
T ss_dssp GTCCS--GGGS-EEEECCCCHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTTTTCS
T ss_pred cCCCc--ccCc-EEEECCCChHHHHHHHHHcCCCHHHHHHHHHHHHHhCChHHhHHHHHHHHHHHhhhhcCCcCCCCCCC
Confidence 99984 2677 999999999999999999999999998777889999999999999999999876 999999 9
Q ss_pred EEEEEEechhHHhheeeeEEec
Q 010144 455 RILMISLGAGFKCNNCVWEVMK 476 (517)
Q Consensus 455 ~VlliafG~G~t~~a~vlr~~~ 476 (517)
+|+++|||+|++|+++++|+..
T Consensus 367 ~vll~~fG~G~t~~~~ll~~~~ 388 (393)
T 3ov2_A 367 WGVLLGFGPGLSIETVVLRSMP 388 (393)
T ss_dssp EEEEEEEETTTEEEEEEEEECB
T ss_pred eEEEEEECccceeeeeeeEEcc
Confidence 9999999999999999999853
|
| >3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-50 Score=425.28 Aligned_cols=352 Identities=16% Similarity=0.230 Sum_probs=259.9
Q ss_pred cCCCceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCC--hHHHHHHHHHHHHhCCceeEeccCCCc-C-----CCCCC
Q 010144 80 KRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLG--LEEYRFLLKNMVSSGIGEETYGPRNVV-E-----GREES 151 (517)
Q Consensus 80 ~~~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~--~~~~~~~~ri~~~sGI~~r~~~~~~~~-~-----~~~~~ 151 (517)
+...+++|.++|+|+|++ +++|+++.+.+......+ ++..+.+++|++++||++||++.+... . .....
T Consensus 6 ~~~~~~~I~~ig~~~P~~---~v~n~e~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~~~~~~~~~~ 82 (387)
T 3oit_A 6 RADGLAAVLAIGTANPPN---CVTQEEIPDFYFRVTNSDHLTALKDKFKRICQEMGVQRRYLHHTEEMLSAHPEFVDRDA 82 (387)
T ss_dssp CCSSCCEEEEEEEECCSE---EEETTTHHHHHHHHTTCTTCHHHHHHHHHHHHTSSCCEEEESCCHHHHHHCGGGTCTTS
T ss_pred CCCCCeEEEEEEeeCCCc---eecHHHHHHHHHHHhCccchHHHHHHHHHHHHhcCcceeeeecCHHHhccCccccccCC
Confidence 456779999999999999 999999999874321111 133455678999999999999766320 0 00111
Q ss_pred cc----HHHhHhhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCee-EEEecCCcchHH
Q 010144 152 PS----LAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIK-AFNLSGMGCSAS 226 (517)
Q Consensus 152 ~~----m~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~-~~dl~~mgCsgg 226 (517)
|+ +..+.+.+.+|+.+|+++||+++|++|+|||+||++|+..+..|+++++|+++||+++.+. ++++++ ||+|+
T Consensus 83 p~~~~r~~~~~~~~~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~p~~a~~v~~~LGl~~~~~~~~~~~~-~C~~~ 161 (387)
T 3oit_A 83 PSLDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHVPGVDFRLVPLLGLRPSVRRTMLHLN-GCFAG 161 (387)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSCCEESCHHHHHHHHHTCCTTCEEEEEECC-GGGHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCCcccHHHHHHHHhCCCCCcceeeEECc-hhHHH
Confidence 23 4456678999999999999999999999999999986544789999999999999986664 899996 99999
Q ss_pred HHHHHHHHHHHHcCCCCEEEEEEecCCCCCCCCCCCcc--ccccccccccceEEEEEeecccccccchhhccceeeeeec
Q 010144 227 VVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGREKS--MMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFG 304 (517)
Q Consensus 227 l~AL~lA~~lL~ag~~~~aLVVs~E~~s~~~~~~~dr~--~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~ 304 (517)
+.||.+|.+++++|+.++||||++|.+|.++.++.|++ .+.+..+|||||+|+||++++....++.+++.....+..
T Consensus 162 ~~al~~A~~~i~sg~~~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~~~~~~~~~- 240 (387)
T 3oit_A 162 CAALRLAKDLAENSRGARVLVVAAELTLMYFTGPDEGCFRTLLVQGLFGDGAAAVIVGADADDVERPLFEIVSAAQTII- 240 (387)
T ss_dssp HHHHHHHHHHHHSSTTCEEEEEEEECGGGTCCCCCSSSCHHHHHHHHBCCEEEEEEEESSCCSSCCCCEEEEEEEEEEC-
T ss_pred HHHHHHHHHHHhcCCCCEEEEEEEeccchhccCccccchHhhhcccccccceEEEEEecCCCcccCCceEEEecccEEe-
Confidence 99999999999999999999999999985566666652 345688999999999999875321112233322111111
Q ss_pred cCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhh--
Q 010144 305 SNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVL-- 382 (517)
Q Consensus 305 td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~-- 382 (517)
.++. +.+.+.....| ..+.++ .++++++.+.+++.+.++| ++.
T Consensus 241 p~~~--~~~~~~~~~~g-~~~~~~-------------------------~~v~~~~~~~~~~~~~~~L-------~~~~~ 285 (387)
T 3oit_A 241 PESD--HALNMRFTERR-LDGVLG-------------------------RQVPGLIGDNVERCLLDMF-------GPLLG 285 (387)
T ss_dssp TTCT--TSEEEEECSSS-EEEEEC-------------------------TTHHHHHHHHHHHHHHHHT-------GGGCC
T ss_pred CCCh--hhccceeecCC-eEEEEC-------------------------cHHHHHHHHHHHHHHHHHH-------Hhhcc
Confidence 1111 11111000001 011122 4556666667778888877 677
Q ss_pred --CCCCCcccccceeecCCCChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCC------C
Q 010144 383 --GAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKG------D 454 (517)
Q Consensus 383 --g~~~d~~~did~~~~Hq~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~G------d 454 (517)
|++ |+ +|+ +|++||+|+++++.++++||++++++..+++++++||||||||+|++|+++.++ ++++| |
T Consensus 286 ~~gl~-d~-d~~-~~v~Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip~~L~~~~~~-~~~~G~~g~~~d 361 (387)
T 3oit_A 286 GDGGG-GW-NDL-FWAVHPGSSTIMDQVDAALGLEPGKLAASRRVLSDYGNMSGATVIFALDELRRQ-RKEAAAAGEWPE 361 (387)
T ss_dssp -------G-GGS-EEEECCCCHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHC-----------CC
T ss_pred cCCCC-cc-ccc-EEEECCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCchHHhHHHHHHHHHHHh-hhccCCCCCCCC
Confidence 665 32 444 999999999999999999999999998778889999999999999999998876 78888 8
Q ss_pred EEEEEEechhHHhheeeeEEe
Q 010144 455 RILMISLGAGFKCNNCVWEVM 475 (517)
Q Consensus 455 ~VlliafG~G~t~~a~vlr~~ 475 (517)
+|+++|||+|++|+++++|++
T Consensus 362 ~vll~~fG~G~t~~~~ll~~~ 382 (387)
T 3oit_A 362 LGVMMAFGPGMTVDAMLLHAT 382 (387)
T ss_dssp EEEEEEEETTTEEEEEEEEEC
T ss_pred EEEEEEecccceeeeeeeEec
Confidence 999999999999999999984
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-50 Score=414.86 Aligned_cols=321 Identities=16% Similarity=0.172 Sum_probs=261.3
Q ss_pred CCCceEEEEEEEEeCCCCCceecHHHHHHHHHhcc---cCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHh
Q 010144 81 RGQCCYMLAYECYKPCDETRRLDTESCARVVWRNK---KLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEA 157 (517)
Q Consensus 81 ~~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~---~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~ 157 (517)
+.++++|.++|+|+|++ +++|+++.+.++... ..++ ++|.+++||++|+++.++ ++.
T Consensus 9 ~~~~v~I~~~g~~lP~~---~v~n~~l~~~~~~~~~~~~~~~------~~i~~~tGi~~R~~~~~~-----~~~------ 68 (345)
T 3s21_A 9 LFQNVSIAGLAHIDAPH---TLTSKEINERLQPTYDRLGIKT------DVLGDVAGIHARRLWDQD-----VQA------ 68 (345)
T ss_dssp SCSSEEEEEEEEEECSE---EEEHHHHHHHHHHHHHHHTCCC------CHHHHTTCCSEEEECSSC-----CCH------
T ss_pred eecceEEEEEEEeCCCc---EEcHHHHHHHHhhcccccCCCH------HHHHHhhCceeEEECCCC-----CCH------
Confidence 46789999999999999 999999998764311 1122 278999999999998653 333
Q ss_pred HhhHHHHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHH
Q 010144 158 FSEMDEIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQL 236 (517)
Q Consensus 158 ~~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~l 236 (517)
.+|+.+|+++||+++|++|+|||.||+++ ++++..|+++.+|+++||++++++++++++ +|+|++.||.+|.++
T Consensus 69 ----~~La~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~-aC~s~~~al~~A~~~ 143 (345)
T 3s21_A 69 ----SDAATQAARKALIDANIGIEKIGLLINTSVSRDYLEPSTASIVSGNLGVSDHCMTFDVAN-ACLAFINGMDIAARM 143 (345)
T ss_dssp ----HHHHHHHHHHHHHHHTCCGGGCCEEEECCSCCSCSSSCHHHHHHHHHTCCTTCEEEECCC-GGGHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCChHHHHHHHHhCCCCCceEEeECC-cCHHHHHHHHHHHHH
Confidence 35589999999999999999999999975 578889999999999999987899999997 999999999999999
Q ss_pred HHcCCCCEEEEEEecCCCCCCCCCC------Ccc------ccccccccccceEEEEEeecccccccchhhccceeeeeec
Q 010144 237 FRTYKNKLAIVVSTESMGPNWYCGR------EKS------MMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFG 304 (517)
Q Consensus 237 L~ag~~~~aLVVs~E~~s~~~~~~~------dr~------~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~ 304 (517)
|++|..++||||++|.+|.. ++.. ++. ......+|||||+|+||++.+.... .. .++.+...
T Consensus 144 i~~g~~~~vLvvg~e~~s~~-~~~~~~~~~~~~~~~~~f~~~~~~~~~GdGA~A~vl~~~~~~~~--~~---~i~~~~~~ 217 (345)
T 3s21_A 144 LERGEIDYALVVDGETANLV-YEKTLERMTSPDVTEEEFRNELAALTLGCGAAAMVMARSELVPD--AP---RYKGGVTR 217 (345)
T ss_dssp HHHTSCSEEEEEEEECCHHH-HHHHHHHHTCTTCCHHHHHHHHGGGGBCCEEEEEEEEEGGGSTT--SC---EEEEEEEE
T ss_pred HHCCCCCEEEEEEEcccchh-hccccccccCCccchhhhhhhccceeeccceeEEEEecCCCCCC--Cc---ceeeeccc
Confidence 99999999999999999862 1111 111 1123578999999999998765311 12 24455555
Q ss_pred cCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCC
Q 010144 305 SNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGA 384 (517)
Q Consensus 305 td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~ 384 (517)
++++..+. +.+. . ..+.|++.++++++.+.+++.+.+++ +++|+
T Consensus 218 ~~~~~~~~-~~~~------------------~----------~~~~~~g~~v~~~~~~~~~~~i~~~l-------~~~gl 261 (345)
T 3s21_A 218 SATEWNKL-CRGN------------------L----------DRMVTDTRLLLIEGIKLAQKTFVAAK-------QVLGW 261 (345)
T ss_dssp ECGGGTTC----------------------------------------CHHHHHHHHHHHHHHHHHHH-------HHHCC
T ss_pred cCcchhhh-cccc------------------C----------cceEEcHHHHHHHHHHHHHHHHHHHH-------HHcCC
Confidence 66544331 1110 0 01234567889999999999999888 89999
Q ss_pred CCCcccccceeecCCCChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEEEechh
Q 010144 385 GLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAG 464 (517)
Q Consensus 385 ~~d~~~did~~~~Hq~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~VlliafG~G 464 (517)
++ +|||+|++||+|+++++.+++.||+++|++ ..++++||||||||+|++|++++++|++++||+|++++||+|
T Consensus 262 ~~---~did~~v~Hq~~~~i~~~~~~~lgl~~ek~---~~~l~~~GNt~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G 335 (345)
T 3s21_A 262 AV---EELDQFVIHQVSRPHTAAFVKSFGIDPAKV---MTIFGEHGNIGPASVPIVLSKLKELGRLKKGDRIALLGIGSG 335 (345)
T ss_dssp CG---GGCSEEEECCSCHHHHHHHHHHHTCCGGGB---CCCHHHHCBCGGGHHHHHHHHHHHHTCCCTTCEEEEEEEETT
T ss_pred CH---HHCCEEEeCCCCHHHHHHHHHHcCcCHHHc---eeeHhhcCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEChh
Confidence 96 999999999999999999999999999999 579999999999999999999999999999999999999999
Q ss_pred HHhheeeeEE
Q 010144 465 FKCNNCVWEV 474 (517)
Q Consensus 465 ~t~~a~vlr~ 474 (517)
++|+++++||
T Consensus 336 ~t~~~~~l~w 345 (345)
T 3s21_A 336 LNCSMAEVVW 345 (345)
T ss_dssp TEEEEEEEEC
T ss_pred hhheEEEEEC
Confidence 9999999997
|
| >3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-49 Score=417.93 Aligned_cols=346 Identities=14% Similarity=0.161 Sum_probs=269.3
Q ss_pred CCCceEEEEEEEEeCCCCCceecHHHHHHHHHhcc-----------------cCChHHHHHHHHHHHHhCCceeEeccCC
Q 010144 81 RGQCCYMLAYECYKPCDETRRLDTESCARVVWRNK-----------------KLGLEEYRFLLKNMVSSGIGEETYGPRN 143 (517)
Q Consensus 81 ~~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~-----------------~~~~~~~~~~~ri~~~sGI~~r~~~~~~ 143 (517)
..++++|.++|+|+|++ +++|+|+.+.++... +.-+.+ .++|.+++||++||++.+.
T Consensus 21 ~~~~~~I~gig~~~P~~---~v~n~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~e~I~~~tGI~~R~~a~~~ 94 (392)
T 3led_A 21 GVRPAVIAATGLYTPPD---SVSNAELVEAFNTYVANFNAANKARIEAGEIEPLQPSS---SEFIEKASGIKSRYVVAKP 94 (392)
T ss_dssp BCCCEEEEEEEEECCSE---EEEHHHHHHHHHHHHHHHHHHTHHHHHTTSSCCCCCCC---HHHHHHHHCCCEEEESCCG
T ss_pred ccCceEEEEEEEeCCCc---eEcHHHHHHHHhhhhcccccccchhhhcccccccCCCc---HHHHHHccCCceEEEecCc
Confidence 34579999999999999 999999998654310 000001 2479999999999998653
Q ss_pred CcCCC----C-CCccHHHhHhhHHHHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCeeEEE
Q 010144 144 VVEGR----E-ESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFN 217 (517)
Q Consensus 144 ~~~~~----~-~~~~m~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl~~~~~~~d 217 (517)
.+..+ + ....+.++.+.+.+|+.+|+++||+++|++|+|||.||++| ++++..|+++++|+++||++ +++||
T Consensus 95 ~~~~~~~~~~~~~~r~~~~~~~~~~La~~Aa~~AL~~agi~~~dId~vi~~t~t~~~~~p~~a~~v~~~LGl~--~~~~d 172 (392)
T 3led_A 95 GIVDPDVMRPIIPERSNDELSILAEMAVTAAEQAIERWGKPRERIGAVLCACSNMQRAYPAMAIEVQNALGLG--GFAFD 172 (392)
T ss_dssp GGGCTTTCSCCCCCCCTTSCCHHHHHHHHHHHHHHHHHCSCGGGEEEEEEESSCCSCSBSCHHHHHHHHTTCC--SEEEE
T ss_pred ccccccccccccccchhcccccHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCccHHHHHHHHHhCCC--CeEEE
Confidence 11000 0 01122333345789999999999999999999999999975 57888999999999999994 79999
Q ss_pred ecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccc
Q 010144 218 LSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNC 297 (517)
Q Consensus 218 l~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~ 297 (517)
+++ +|+|++.||.+|.++|++|+.++||||++|.+|. +.++.||+. ..+|||||+|+||++++... .++ +
T Consensus 173 v~~-aC~g~~~aL~~A~~~i~~g~~~~vLvvg~E~~S~-~~d~~dr~t---~~lFGDGA~A~vl~~~~~~~--~~~---~ 242 (392)
T 3led_A 173 MNV-ACSSATFGLKTAADFVGGGSVDAVLMVNPEICSG-HLNFRDRDS---HFIFGDVATAAIVERADDAQ--GGW---S 242 (392)
T ss_dssp EEC-GGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGG-GCCTTCTTT---TTTBCEEEEEEEEEEGGGCC--SSE---E
T ss_pred ECC-ccHHHHHHHHHHHHHHHCCCCCEEEEEeehhcCC-cCCcCcccC---CcccccccEEEEEEecCCCC--CCC---e
Confidence 986 9999999999999999999999999999999987 456677764 78999999999999876421 123 3
Q ss_pred eeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCc
Q 010144 298 LVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTK 377 (517)
Q Consensus 298 i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~ 377 (517)
++.+...+++. +.+..+. |.. .+..++. . . .....+.|++.++|++++..+++.+.++|
T Consensus 243 i~~~~~~s~~~--~~~~~~~------g~~-~~~~~~~----~--~-~~~~~~~~~g~~v~~~a~~~~~~~i~~~L----- 301 (392)
T 3led_A 243 ILGTKLKTQFS--NNIRNNA------GFL-NRAWPEG----R--D-KADKLFVQQGRKVFKEVVPLVSEMIIEHA----- 301 (392)
T ss_dssp EEEEEEEECCC--SSEEBCC------SGG-GGGSGGG----T--T-SGGGSCEECHHHHHHHHHHHHHHHHHHHH-----
T ss_pred EEEEEEEEccc--cccccCC------Ccc-cCCCccc----c--c-cccceEEechHHHHHHHHHHHHHHHHHHH-----
Confidence 45566666643 2222211 110 0000000 0 0 01123567789999999999999999998
Q ss_pred hhhhhCCCCCcccccceeecCCCChHHHHHHHhhC-C--CCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCC
Q 010144 378 PEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGL-E--LDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGD 454 (517)
Q Consensus 378 ~~~~~g~~~d~~~did~~~~Hq~~~~il~~i~~~L-g--l~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd 454 (517)
+++|+++ +|||+|++||+|+++++.++++| | ++.+++ +.++++||||||||+|++|+++ .+++++||
T Consensus 302 --~~~gl~~---~dId~~v~Hqan~~i~~~~~~~llgl~~~~~k~---~~~l~~~GNtssAsipl~L~~~--~~~~~~Gd 371 (392)
T 3led_A 302 --REIGIDP---HGLKRMWLHQANINMNEIIGRKVLGRDPTRDEN---VIILDDYANTSSAGSIIAFHKH--QDDMAQGD 371 (392)
T ss_dssp --HHTTCCG---GGCSEEEECSSCHHHHHHHHHHHHTSCCCTTTB---CCCHHHHCBCGGGHHHHHHHHC--CTTCCTTC
T ss_pred --HHcCCCH---HHCcEEEEcCCCHHHHHHHHHHhcCCCCCHHHH---HHHHhhhCccHHHHHHHHHHHH--hCCCCCCC
Confidence 8999996 89999999999999999999996 6 567887 7899999999999999999986 67999999
Q ss_pred EEEEEEechhHHhheeeeEEe
Q 010144 455 RILMISLGAGFKCNNCVWEVM 475 (517)
Q Consensus 455 ~VlliafG~G~t~~a~vlr~~ 475 (517)
+|++++||+|++|+++++||.
T Consensus 372 ~vll~gfG~G~t~~~~ll~~~ 392 (392)
T 3led_A 372 LGLICSFGAGYSAGTVFVQKR 392 (392)
T ss_dssp EEEEEEEETTTEEEEEEEEEC
T ss_pred EEEEEEEChhhEeEEEEEEEC
Confidence 999999999999999999983
|
| >3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-49 Score=421.09 Aligned_cols=344 Identities=15% Similarity=0.185 Sum_probs=261.2
Q ss_pred cCCCceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcC-C-----------
Q 010144 80 KRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVE-G----------- 147 (517)
Q Consensus 80 ~~~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~-~----------- 147 (517)
+.++++||.++|+++|++ +++|+++.+.+........ ..+.+++|++++||++|++.-+.... .
T Consensus 22 ~~~m~~~i~~i~ta~P~~---~~~q~~~~~~~~~~~~~~~-~~~~~~~i~~~sgI~~R~~~l~~~~~~~~~~~~~~~~~~ 97 (413)
T 3v7i_A 22 SNAMAAYLCAPAVIHGEH---SVETREIVEEVRGRHPHAP-WAPRIDGIAASTGIESRGWMLPLEAAVAPGGGGDLGAAR 97 (413)
T ss_dssp --CCCEEEECCEEEECSE---EEEHHHHHHHHHHHCSSCS-SGGGHHHHHHHHTCSEEEESSCHHHHHSCCCCCCCHHHH
T ss_pred cCCCCeEEEeeEeeCCCc---ccCHHHHHHHHHHhcccch-hHHHHHHHHHhCCcCeeeeecCHHHhccccccccccccc
Confidence 677789999999999999 9999999998876432222 22226799999999999986542111 0
Q ss_pred -----C-----------------CCCccHH----HhHhhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHH
Q 010144 148 -----R-----------------EESPSLA----EAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTS 201 (517)
Q Consensus 148 -----~-----------------~~~~~m~----~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~ 201 (517)
+ ...+.+. .+.+++.+|+.+|+++||+++|++|+|||+||++|+..+..|+++.
T Consensus 98 ~~~~~~~~~n~~l~~~~~~~e~i~~rtgi~~R~~~~~~~~~~La~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~ 177 (413)
T 3v7i_A 98 EALVRDGFTEQDANRAIAALKAVPASQTVQERTAPAWEAVQAYGERAARGALQIAGLDVADVDCLITSNSTTPALPGLDV 177 (413)
T ss_dssp HHC------CHHHHHHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECCSSCCSSCHHH
T ss_pred ccccccccchhhhhhhcCcccceecCCCHHHhCcccccCHHHHHHHHHHHHHHHhCcCHHHCCEEEEEccCCCCcCHHHH
Confidence 0 0111222 2346789999999999999999999999999998654468999999
Q ss_pred HHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCCCCCCCCcc--ccccccccccceEEE
Q 010144 202 RIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGREKS--MMLSNILFRSGGCSM 279 (517)
Q Consensus 202 ~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~~~~~~dr~--~lv~~~lfGDGAAAv 279 (517)
+|+++||+++++.++++.++||+|++.||++|.+++++|+.++||||++|.+|.. +++.|++ .++...+|||||+|+
T Consensus 178 ~v~~~LGl~~~~~~~~v~~~~Cagg~~AL~~A~~~i~ag~~~~vLvvg~E~~S~~-~~~~d~~~~~lv~~~LFGDGAaAv 256 (413)
T 3v7i_A 178 ALANRLPLRGDTMLLPATQWACVAGTRSLALAADLVAADPDRVVLVVISEALSTT-YQPADDTLESLIVRLLFADTAVAA 256 (413)
T ss_dssp HHHHHTTCCTTCEEEEESSCGGGHHHHHHHHHHHHHHHCTTCEEEEEEEECGGGG-CCSSCCSTTHHHHHHHBCCEEEEE
T ss_pred HHHHHhCCCCCceEEEeeCCccHHHHHHHHHHHHHHhcCCCCEEEEEEEeccccc-cCccccchhhhhcceeeccccEEE
Confidence 9999999997799999944699999999999999999999999999999999984 4556654 366689999999999
Q ss_pred EEeecccccccchhhccceeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHH
Q 010144 280 LLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRY 359 (517)
Q Consensus 280 LLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~ 359 (517)
||++++... .++++.+.. +....++. +.+.+..++.| ..+ .|+++ ++ +
T Consensus 257 vl~~~~~~~--~~~~l~~~~-~~~~p~~~--~~~~~~~~~~g-~~~------------------------~m~~~-v~-~ 304 (413)
T 3v7i_A 257 VVTGRPRPE--SVLRLDAAW-HHTLPGTR--DLHRLETRADG-THF------------------------VMDRR-GP-R 304 (413)
T ss_dssp EEESSCCTT--EEEEEEEEE-EEECTTCT--TSEEEEEETTE-EEE------------------------EECTT-HH-H
T ss_pred EEEecCCCC--CCEEEEccc-cEEeCCCc--cccCccccCCc-eEE------------------------EECcH-HH-H
Confidence 999876421 245443221 11212211 11111111101 011 12222 33 2
Q ss_pred HHHHHHHHHHHhhcCCCchhh------hhCCCCCcccccceeecCCCChHHHHHHHhhCC--CCcccchhhhhcccCccc
Q 010144 360 VIQSYYENRIRKSTSSTKPEA------VLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLE--LDEYDLEPARMALHRFGN 431 (517)
Q Consensus 360 ~~~~v~~~v~~~l~~~~~~~~------~~g~~~d~~~did~~~~Hq~~~~il~~i~~~Lg--l~~e~~~~S~~~l~~~GN 431 (517)
++..+++.+.++| + ++|+ + ||+|++||+|+++++.++++|| +++|++.+|+.+++ |||
T Consensus 305 ~v~~~~~~i~~~L-------~~~~~~~~~gl-----~-id~~v~Hq~~~~il~~v~~~Lg~~l~~ek~~~s~~~l~-~GN 370 (413)
T 3v7i_A 305 AVQETVTAMWEWL-------RVRYEDDPSSW-----H-PDVLLAHPGGTRVLEYMEQTMPDEWPSGLLSYSRDSYT-SGN 370 (413)
T ss_dssp HHHHHHHHHHHHH-------HHHTSSSCTTC-----C-CCEEEEECSSHHHHHHHHHHSCSSCCSCSTHHHHHHHT-TCB
T ss_pred HHHHHHHHHHHHH-------hhccccccCCC-----c-eeEEEECCCChHHHHHHHHHhCCCCCHHHhhccceEec-eeC
Confidence 3444667777776 4 3433 3 8999999999999999999999 99999988899999 999
Q ss_pred chhhHHHHHHHHHHHcCCCCCCCEEEEEEechhHHhheeeeEEe
Q 010144 432 TSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVM 475 (517)
Q Consensus 432 tsSASi~~~L~~~~~~g~i~~Gd~VlliafG~G~t~~a~vlr~~ 475 (517)
|||||+|+.|++++ +|++++||+|+++|||+|++|+++++||+
T Consensus 371 tssAsi~~~L~~~~-~~~~~~Gd~vll~~fG~Glt~~~~ll~w~ 413 (413)
T 3v7i_A 371 RGGAAVFDILRRAH-DAGQKTGSRAVLYAAAPGLTATALEGEWL 413 (413)
T ss_dssp CGGGHHHHHHHHHH-HHCCCTTCEEEEEEEETTTEEEEEEEEEC
T ss_pred hHHHHHHHHHHHHH-hCCCCCCCEEEEEEECHHHhHhhhheEeC
Confidence 99999999999999 67899999999999999999999999995
|
| >2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-48 Score=406.18 Aligned_cols=350 Identities=14% Similarity=0.172 Sum_probs=268.1
Q ss_pred cCCCceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCC------Ccc
Q 010144 80 KRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREE------SPS 153 (517)
Q Consensus 80 ~~~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~------~~~ 153 (517)
+++++++|+++|+|+|++ +++++++.+.++.....+.+..++.++|.+++||++|+++.++. ..++. ...
T Consensus 9 ~~~~~v~I~g~g~~~P~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~-~~~~~~~~~~~~~~ 84 (374)
T 2h84_A 9 KSNNNSFVLGIGISVPGE---PISQQSLKDSISNDFSDKAETNEKVKRIFEQSQIKTRHLVRDYT-KPENSIKFRHLETI 84 (374)
T ss_dssp ---CCCEEEEEEEECSSS---CEEHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCCCEECCSSCTT-SGGGCGGGGGGCCH
T ss_pred cCCCCeEEEEEEEeCCCc---ccCHHHHHHHHHHhhccChHHHHHHHHHHHhCCcCcceeecCcc-ccccccccCChHHH
Confidence 567789999999999999 99999999987643223444556777899999999999875431 10000 012
Q ss_pred HHH---hHhhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHH
Q 010144 154 LAE---AFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAV 230 (517)
Q Consensus 154 m~~---~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL 230 (517)
++. +++.+.+|+.+|+++||+++|++|+|||.||++++.++..|+++.+|+++||++++++++++.+++|+|++.||
T Consensus 85 ~~~~~~~~~~~~~la~~Aa~~al~~ag~~~~~id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~al 164 (374)
T 2h84_A 85 TDVNNQFKKVVPDLAQQACLRALKDWGGDKGDITHIVSVTSTGIIIPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSL 164 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHcCcCCCCceEEecCCcCHHHHHHH
Confidence 222 55788999999999999999999999999999876557799999999999999867899999744999999999
Q ss_pred HHHHHHHHcCCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccc
Q 010144 231 DLVQQLFRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAY 310 (517)
Q Consensus 231 ~lA~~lL~ag~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~ 310 (517)
.+|.++|++|+.++|||+++|.++..++++.|++..+...+|||||+|+||++.+...++..+++.+.- +....++...
T Consensus 165 ~~A~~~i~~g~~~~vLv~g~e~~s~~~~~~~dr~~~~~~~lfGDGA~A~vL~~~~~~~~~~~~~l~~~g-~~~~~~~~~~ 243 (374)
T 2h84_A 165 RTAASLAKASPRNRILVVCTEVCSLHFSNTDGGDQMVASSIFADGSAAYIIGCNPRIEETPLYEVMCSI-NRSFPNTENA 243 (374)
T ss_dssp HHHHHHHTTCTTCEEEEEEEECCGGGCCCSSSHHHHHHHHHBCCEEEEEEEESSCCTTCCCCEEEEEEE-EEECSSCTTS
T ss_pred HHHHHHHHcCCCCEEEEEEEEecchhhcCCCCHHHHhhhhhhccCcEEEEEecCCCcccCCceeEEeee-eEEeCCCccc
Confidence 999999999999999999999998744466777655557899999999999987542111223332211 1111221111
Q ss_pred cceeeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhC------C
Q 010144 311 ECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLG------A 384 (517)
Q Consensus 311 ~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g------~ 384 (517)
....... .|+.+ . + +.+++.++...+++.+.++| +++| +
T Consensus 244 ~~~~~~~-----~g~~~----------------~-~------~~~v~~~~~~~~~~~i~~~L-------~~ag~~~~~~l 288 (374)
T 2h84_A 244 MVWDLEK-----EGWNL----------------G-L------DASIPIVIGSGIEAFVDTLL-------DKAKLQTSTAI 288 (374)
T ss_dssp EEEEEET-----TEEEE----------------E-E------CTTHHHHHHHHHHHHHHHHH-------HHHTTTSCSCC
T ss_pred ceeEEec-----CcEEE----------------E-e------CchHHHHHHHHHHHHHHHHH-------HhcCCccccCC
Confidence 0000000 11100 0 1 13455555566777777777 7889 8
Q ss_pred CCCcccccceeecCCCChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEEEechh
Q 010144 385 GLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAG 464 (517)
Q Consensus 385 ~~d~~~did~~~~Hq~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~VlliafG~G 464 (517)
++ +|||+| +||+|.++++.+++.||++++++..|+.++++||||+|||+|+.|++++++|+ +||+|++++||+|
T Consensus 289 ~~---~did~~-~H~~~~~i~d~~~~~lgl~~~k~~~s~~~~~~~Gnt~sasi~~~L~~~~~~~~--~Gd~vll~~~G~G 362 (374)
T 2h84_A 289 SA---KDCEFL-IHTGGKSILMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIFVMDHARKSKS--LPTYSISLAFGPG 362 (374)
T ss_dssp CS---SSSEEE-ECCCCHHHHHHHHHHTTCCGGGGHHHHHHHHHHCBCTTHHHHHHHHHHHTCSC--CCSEEEEEEEETT
T ss_pred Ch---hhcCEe-ECCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHhhcC--CCCeEEEEEeccc
Confidence 86 899999 99999999999999999999999766688999999999999999999999887 8999999999999
Q ss_pred HHhheeeeEEe
Q 010144 465 FKCNNCVWEVM 475 (517)
Q Consensus 465 ~t~~a~vlr~~ 475 (517)
++|++++|||.
T Consensus 363 ~t~~~~ll~~~ 373 (374)
T 2h84_A 363 LAFEGCFLKNV 373 (374)
T ss_dssp TEEEEEEEEEC
T ss_pred hhhhhhhheec
Confidence 99999999985
|
| >1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-47 Score=404.43 Aligned_cols=349 Identities=16% Similarity=0.149 Sum_probs=268.6
Q ss_pred ceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEe-ccCCCcCC------CCC-CccHH
Q 010144 84 CCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETY-GPRNVVEG------REE-SPSLA 155 (517)
Q Consensus 84 ~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~-~~~~~~~~------~~~-~~~m~ 155 (517)
.++|.++|+|+|++ +++|+++.+..+.....+... ++.++|.+++||++|++ +.+..++. +++ ...|.
T Consensus 32 ~~~I~~ig~~~P~~---~v~n~~l~~~~~~~~~~~~~~-~~~~~i~~~tGI~~R~~~a~~~~~~~~~~~~~p~~~~~r~~ 107 (393)
T 1ted_A 32 VAVIEGLATGTPRR---VVNQSDAADRVAELFLDPGQR-ERIPRVYQKSRITTRRMAVDPLDAKFDVFRREPATIRDRMH 107 (393)
T ss_dssp EEEEEEEEEECCSC---EEEHHHHHHHHHTC----CCT-THHHHHHHTSCCSEEECSSCTTSTTHHHHTTCSSCHHHHHH
T ss_pred ccEEEEeeeeCCCc---ccCHHHHHHHHHHhcccccHH-HHHHHHHHhCCcCcceeeecChHhcccccccCCCCHHHHHH
Confidence 48999999999999 999999998876542111111 34568999999999998 65421100 000 01355
Q ss_pred HhHhhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHH
Q 010144 156 EAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQ 235 (517)
Q Consensus 156 ~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~ 235 (517)
.+.+.+.+|+.+|+++||+++|++|+|||.||++++..+..|+++.+|+++||+++.+.++++.+++|+|++.||.+|.+
T Consensus 108 ~~~~~~~~la~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~aCas~~~Al~~A~~ 187 (393)
T 1ted_A 108 LFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATN 187 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHH
T ss_pred HHhhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCccChHHHHHHHHcCcCCCcceeEeccchhHHHHHHHHHHHH
Confidence 56788899999999999999999999999999876433678999999999999987788999933599999999999999
Q ss_pred HHHcCCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeeccccc-ccchhhccceeee--eeccCcccccc
Q 010144 236 LFRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALK-HKAILKLNCLVRT--HFGSNDEAYEC 312 (517)
Q Consensus 236 lL~ag~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~-~~~~~~l~~i~~t--~~~td~~~~~~ 312 (517)
+|++|..++|||+++|.++..+..+.+++..++.++|||||+|+||++.+... +++.+ ..+... ...+|++....
T Consensus 188 ~i~~G~~~~vLv~g~e~~s~~~~~~~~r~~~~~~~lfGDGA~A~vL~~~~~~~~~~~~~--~~i~~~~~~~~~d~~~~~~ 265 (393)
T 1ted_A 188 YVRAHPAMKALVVCIELCSVNAVFADDINDVVIHSLFGDGCAALVIGASQVQEKLEPGK--VVVRSSFSQLLDNTEDGIV 265 (393)
T ss_dssp HHHHSTTCEEEEEEEEECGGGCCCCSSHHHHHHHHHBCEEEEEEEEEEECTTSCCCTTC--EEEEEEEEEECTTCTTSEE
T ss_pred HHHcCCCCEEEEEEEEeccccCCCCCCHHHhhhhhhhcCccEEEEEecCCCccccCcce--eeeeccceEEcCCchhhcc
Confidence 99999999999999999987433235666555578999999999999765321 11122 123332 22345432221
Q ss_pred eeeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCccccc
Q 010144 313 CMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGI 392 (517)
Q Consensus 313 ~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~di 392 (517)
+..+. .|+. .+.+.+++++....+++.+.++| +++|+++ +||
T Consensus 266 ~~~~~-----~g~~-----------------------~~~g~~v~~~~~~~~~~~i~~aL-------~~agl~~---~dI 307 (393)
T 1ted_A 266 LGVNH-----NGIT-----------------------CELSENLPGYIFSGVAPVVTEML-------WDNGLQI---SDI 307 (393)
T ss_dssp EEEET-----TEEE-----------------------EEECTTHHHHHHHHHHHHHHHHH-------HHTTCCG---GGC
T ss_pred ceecC-----CCeE-----------------------EecCchHHHHHHHHHHHHHHHHH-------HHcCCCH---hHC
Confidence 11110 0110 01124556666667778888888 7899996 899
Q ss_pred ceeecCCCChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCC-CCCCEEEEEEechhHHhheee
Q 010144 393 EHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRL-KKGDRILMISLGAGFKCNNCV 471 (517)
Q Consensus 393 d~~~~Hq~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i-~~Gd~VlliafG~G~t~~a~v 471 (517)
|+|++||+|.++++.+++.||++++++..|+.++++||||+|||+|+.|++++++|++ ++||+|++++||+|++|++++
T Consensus 308 d~~~~H~~~~~i~d~~~~~lgl~~~k~~~s~~~~~~~GNt~sAsi~~~L~~~~~~g~~~~~Gd~vll~~~G~G~t~~~~~ 387 (393)
T 1ted_A 308 DLWAIHPGGPKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQQAESAKAISTGVAFAFGPGVTVEGML 387 (393)
T ss_dssp SCEEECCSCHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHHHHHHHSCSSSSSSEEEEEEEEETTTEEEEEE
T ss_pred CEEEECCCcHHHHHHHHHHcCCCHHHHHHHHHHHHhhCCchHhHHHHHHHHHHhcCccCCCCCeEEEEEeccchhhhhhh
Confidence 9999999999999999999999999998777899999999999999999999999999 599999999999999999999
Q ss_pred eEEec
Q 010144 472 WEVMK 476 (517)
Q Consensus 472 lr~~~ 476 (517)
|||.+
T Consensus 388 l~~~~ 392 (393)
T 1ted_A 388 FDIIR 392 (393)
T ss_dssp EEECC
T ss_pred eeecc
Confidence 99976
|
| >1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-47 Score=404.14 Aligned_cols=353 Identities=16% Similarity=0.218 Sum_probs=267.1
Q ss_pred hcCCCceEEEEEEEEeCCCCCceecHHHHHHHHHhccc--CChHHHHHHHHHHHHhCCceeEeccCCC-cCCC-------
Q 010144 79 QKRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKK--LGLEEYRFLLKNMVSSGIGEETYGPRNV-VEGR------- 148 (517)
Q Consensus 79 ~~~~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~--~~~~~~~~~~ri~~~sGI~~r~~~~~~~-~~~~------- 148 (517)
++++.+++|+++|+|+|++ +++|+++.+.+..... ..++..++.++|.+++||++|+++.+.. +..+
T Consensus 33 ~~~~~~~~I~gig~~lP~~---~v~n~el~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~a~~~~~~~~~p~~~~~~ 109 (413)
T 1xes_A 33 QRADGFASILAIGTANPPN---AVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQRYMYLTEEILKKNPDVCAFV 109 (413)
T ss_dssp HSCCSCEEEEEEEEECCSC---EEEGGGHHHHHHHHTTCTTCHHHHHHHHHHHHTSCCCEEECSCCHHHHHTCHHHHSSS
T ss_pred ccCCCCeEEEEEeecCCCC---ccCHHHHHHHHHHhccccchhhhHHHHHHHHhhcCcCceEEeeChhhhccCccccccc
Confidence 5677889999999999999 9999999988744211 1123344567899999999999875420 0000
Q ss_pred --CC-CccHHHhHhhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCee-EEEecCCcch
Q 010144 149 --EE-SPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIK-AFNLSGMGCS 224 (517)
Q Consensus 149 --~~-~~~m~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~-~~dl~~mgCs 224 (517)
++ ...++.+.+.+.+|+.+|+++||+++|++|+|||.||++++..+..|+++++|+++||+++.+. ++++++ +|+
T Consensus 110 ~~~~~~~r~~~~~~~~~~La~~Aa~~AL~~agl~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~~-aCa 188 (413)
T 1xes_A 110 EVPSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPSVKRVGVFQH-GCF 188 (413)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESCCCEESCHHHHHHHHHTCCTTCEEEEEESC-CTT
T ss_pred cCCCHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCccchHHHHHHHHcCcCCccchhceecC-ccH
Confidence 10 1245566788999999999999999999999999999986544778999999999999986564 999986 999
Q ss_pred HHHHHHHHHHHHHHcCCCCEEEEEEecCCCCCCCCCCC--ccccccccccccceEEEEEeeccccc-ccchhhccceeee
Q 010144 225 ASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGRE--KSMMLSNILFRSGGCSMLLTNNRALK-HKAILKLNCLVRT 301 (517)
Q Consensus 225 ggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~~~~~~d--r~~lv~~~lfGDGAAAvLLs~~~~~~-~~~~~~l~~i~~t 301 (517)
|++.||.+|.++|++|..++||||++|.++..+.++.+ ++......+|||||+|+||++.+... ..+.+++.+...
T Consensus 189 s~~~AL~~A~~~i~~G~~~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~~~~~~~~~l~~~~~- 267 (413)
T 1xes_A 189 AGGTVLRMAKDLAENNRGARVLVICSETTAVTFRGPSETHLDSLVGQALFGDGASALIVGADPIPQVEKACFEIVWTAQ- 267 (413)
T ss_dssp HHHHHHHHHHHHHHTSTTCCEEEEEEECTTTTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSCCTTTSCCSEEEEEEEE-
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEEehhhhhhhcCCCccchhhcccceeEecccEEEEEecCCCccccCCceEEEeeee-
Confidence 99999999999999999999999999999875545443 22234578999999999999765421 001122221110
Q ss_pred eeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhh
Q 010144 302 HFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAV 381 (517)
Q Consensus 302 ~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~ 381 (517)
....++. +.+.+... ..|+ . +.| +.++++++.+.+++.+.++| ++
T Consensus 268 ~~~p~~~--~~~~~~~~---~~g~----------------~------~~~-~~~v~~~~~~~~~~~i~~~L-------~~ 312 (413)
T 1xes_A 268 TVVPNSE--GAIGGKVR---EVGL----------------T------FQL-KGAVPDLISANIENCMVEAF-------SQ 312 (413)
T ss_dssp EECTTCT--TTEEEEEE---TTEE----------------E------EEE-CTTHHHHHHHHHHHHHHHHH-------GG
T ss_pred EEcCCCh--hhcCcEEe---cCce----------------E------EEe-cccHHHHHHHHHHHHHHHHH-------Hh
Confidence 0001100 00000000 0000 0 111 24677777778888888888 78
Q ss_pred hCCCCCcccccceeecCCCChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCC--------
Q 010144 382 LGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKG-------- 453 (517)
Q Consensus 382 ~g~~~d~~~did~~~~Hq~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~G-------- 453 (517)
+|++ |+ +|| +|++||+|+++++.+++.||+++|++..|++++++||||||||+|++|++++++|+ ++|
T Consensus 313 ~gl~-d~-~di-~~v~Hq~~~~i~~~~~~~Lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~-~~G~~~~G~~~ 388 (413)
T 1xes_A 313 FKIS-DW-NKL-FWVVHPGGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASL-QNGCSTTGEGL 388 (413)
T ss_dssp GTCC-CG-GGS-EEEECCSCHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHH-HTTCSBTTTTC
T ss_pred cCCC-Cc-cce-eEEECCCCHHHHHHHHHHcCCChHHhHHHHHHHHhcCcCchhhHHHHHHHHHHhcc-ccCCCCCCCCc
Confidence 8987 43 788 89999999999999999999999999766778999999999999999999998876 667
Q ss_pred CEEEEEEechhHHhheeeeEEe
Q 010144 454 DRILMISLGAGFKCNNCVWEVM 475 (517)
Q Consensus 454 d~VlliafG~G~t~~a~vlr~~ 475 (517)
|+|++++||+|++|++++||+.
T Consensus 389 d~vll~~fG~G~t~~~~ll~~~ 410 (413)
T 1xes_A 389 EMGVLFGFGPGLTIETVVLKSV 410 (413)
T ss_dssp SEEEEEEEETTTEEEEEEEEEC
T ss_pred ceEEEEEecCCcEEeEEEEEec
Confidence 9999999999999999999986
|
| >3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-47 Score=398.42 Aligned_cols=331 Identities=14% Similarity=0.156 Sum_probs=248.7
Q ss_pred CCCceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCC--CCccHHHhH
Q 010144 81 RGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGRE--ESPSLAEAF 158 (517)
Q Consensus 81 ~~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~--~~~~m~~~~ 158 (517)
|.++++|.++|+|+|+. +++++++.+. .+.+ ++.+++||++|+++++. + +
T Consensus 2 ~~~~v~I~g~g~ylP~~---~~~~~~~~~~------~~~~------~~~~~tGi~~r~~a~~~-----e~~~-------- 53 (357)
T 3s3l_A 2 RWENLFVSGVAAWLPPL---STAQDAVMAG------LLDP------ARSKLRGIESVTVASDA-----EEDA-------- 53 (357)
T ss_dssp BCSSCEEEEEEEECCCE---EEHHHHHHTT------SSCH------HHHHHHCCCEEECCCSS-----GGGS--------
T ss_pred CcCceEEEEEEEECCCC---CCHHHHHHhc------CCcH------HHHHHcCceEEEecCCC-----CCCC--------
Confidence 35689999999999998 7777654421 1122 23588999999987542 2 2
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecC--CCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHH
Q 010144 159 SEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSL--FSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQL 236 (517)
Q Consensus 159 ~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~--~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~l 236 (517)
+.+|+.+|+++||+++|++|+|||.||++|+. ....++.+++|+++||++ ++++||+++ +|+|++.||.+|.++
T Consensus 54 --~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~~~~~~d~~~~a~~v~~~lG~~-~~~~~~v~~-aC~~~~~al~~A~~~ 129 (357)
T 3s3l_A 54 --PPRMAARAARAALGRGDVDPADVSLVLHSSLWFQGIDLWPAASYVAHEAVGR-HVPAFGLAQ-RCNGGMGAIELAGAY 129 (357)
T ss_dssp --HHHHHHHHHHHHHHHTTCCGGGEEEEEEECSSCCSSSSSCHHHHHHHHHTCS-SSCEEEEEC-GGGHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCcccccHHHHHHHHhCCC-CCcEEEEcC-ccHHHHHHHHHHHHH
Confidence 34558999999999999999999999998642 112346799999999996 899999996 999999999999999
Q ss_pred HHcCCCC--EEEEEEecCCCCCCC-CCCCccccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccccce
Q 010144 237 FRTYKNK--LAIVVSTESMGPNWY-CGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECC 313 (517)
Q Consensus 237 L~ag~~~--~aLVVs~E~~s~~~~-~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~ 313 (517)
|++|+.+ +||||++|.+|..++ +++++. ..+|||||+|+||++.++.. +++.+.+.+|+...+ +
T Consensus 130 i~sg~~~~~~vLvvg~e~~s~~~~~~~~~~~----~~lfGDGA~A~vl~~~~~~~--------~i~~~~~~s~g~~~~-~ 196 (357)
T 3s3l_A 130 LGSGIGAGHAALLTTGDRFAGPRIDRWNSVD----VTMYGDGAAALVLSTRDGFA--------RVLSTATGVDNSLEI-L 196 (357)
T ss_dssp HHTTSSSSSEEEEEEEECCCTTTCCTTTSSS----SCCBCCEEEEEEEESSCCSE--------EEEEEEEEECGGGGG-G
T ss_pred HHcCCCCCCEEEEEEEecccccccccccccC----CcccccccEEEEEecCCCCC--------eEEEEEEEEccChhh-h
Confidence 9999998 999999999995223 344542 68999999999999875431 356677788876543 3
Q ss_pred eeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHH-HHHHHHHHHHHHhhcCCCchhhhhCCCCCccccc
Q 010144 314 MQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFR-YVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGI 392 (517)
Q Consensus 314 ~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~-~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~di 392 (517)
+...+....... -.....++.++ +.+....|..+ .++ ++++.+++.+.++| +++|+++ +||
T Consensus 197 ~~~~~~~~~~~~-~~~~~~~~~g~--~~~~~~~g~~~-----~~~~~~~~~~~~~i~~~L-------~~~gl~~---~di 258 (357)
T 3s3l_A 197 ARGDEPFAPHPV-EPSPVADLGTR--TVRGAELADLP-----DLTHRYIDLLVAAKTQAL-------EDAGTAI---EDI 258 (357)
T ss_dssp GTTTCCCCSSCC-SSCCCCCHHHH--HHHHHHHHCCT-----THHHHHHHHHHHHHHHHH-------HHTTCCG---GGC
T ss_pred cccCCCCCCCcc-CcCCccccccc--hhhhhcccchh-----hhHHHHHHHHHHHHHHHH-------HHcCCCH---HHC
Confidence 321110000000 00000011111 01111111100 133 77788999999988 8999996 999
Q ss_pred ceeec-CCCChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEEEechhHHhheee
Q 010144 393 EHFCL-HPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCV 471 (517)
Q Consensus 393 d~~~~-Hq~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~VlliafG~G~t~~a~v 471 (517)
|+|++ ||+|.. ++.++++||+++|++. .....+||||||||+|++|++++++|++++||+|++++||+|++|++++
T Consensus 259 d~~v~~hq~~~~-~~~~~~~lgl~~ek~~--~~~~~~~GNt~aAsipl~L~~~~~~g~l~~Gd~vll~~fG~G~t~~a~l 335 (357)
T 3s3l_A 259 AHAVIPVSRRGT-GHELHDLLGLPDERTS--WAYGRTTGHVGAGDQYAGLAHLVENALVQPGDRVLLFGGGAGYTCTAAV 335 (357)
T ss_dssp SEEECCSCCCCS-SCCHHHHHTSCGGGBT--HHHHHHHCBCTTCHHHHHHHHHHHTTCCCTTCEEEEECCBTTTEEEEEE
T ss_pred CEEEecCcChHH-HHHHHHHcCCCHHHhH--HHhccccccchHhHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhheeee
Confidence 99995 999999 9999999999999984 3345789999999999999999999999999999999999999999999
Q ss_pred eEEecc
Q 010144 472 WEVMKD 477 (517)
Q Consensus 472 lr~~~~ 477 (517)
+||.+.
T Consensus 336 l~~~~~ 341 (357)
T 3s3l_A 336 VEILRM 341 (357)
T ss_dssp EEECCC
T ss_pred EEeccC
Confidence 999774
|
| >3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-47 Score=399.80 Aligned_cols=352 Identities=14% Similarity=0.186 Sum_probs=265.9
Q ss_pred CceEEEEEEEEeCCCCCceecHHHHHHHHHhcc--cCChHHHHHHHHHHHHhCCceeEeccCCC-cC---------CCCC
Q 010144 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNK--KLGLEEYRFLLKNMVSSGIGEETYGPRNV-VE---------GREE 150 (517)
Q Consensus 83 ~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~--~~~~~~~~~~~ri~~~sGI~~r~~~~~~~-~~---------~~~~ 150 (517)
++++|.++|+|+|++ +++|+++.+.+.... ...++..++.++|.+++||++||++.+.. +. .+..
T Consensus 11 ~~~~I~gig~~~P~~---~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~p~~~~~~~~~~ 87 (387)
T 3a5r_A 11 KLATVMAIGTANPPN---CYYQADFPDFYFRVTNSDHLINLKQKFKRLCENSRIEKRYLHVTEEILKENPNIAAYEATSL 87 (387)
T ss_dssp CCEEEEEEEEECCSC---EEETTTHHHHHHHHTTCTTCHHHHHHHHHHHHTTTCCEEECSCCHHHHHHCHHHHSSSSSCH
T ss_pred CCcEEEEeeecCCCc---ccCHHHHHHHHHHhcccccchhhHHHHHHHHHhCCCCceEEecChhhhccCcccccccCCCH
Confidence 458999999999999 999999998764311 11123234567899999999999875420 00 0000
Q ss_pred CccHHHhHhhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCee-EEEecCCcchHHHHH
Q 010144 151 SPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIK-AFNLSGMGCSASVVA 229 (517)
Q Consensus 151 ~~~m~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~-~~dl~~mgCsggl~A 229 (517)
...++.+.+.+.+|+.+|+++||+++|++|+|||+||++++..+..|+.+.+|+++||+++.+. ++++++ +|+|++.|
T Consensus 88 ~~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~~-aC~s~~~a 166 (387)
T 3a5r_A 88 NVRHKMQVKGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAGVDMPGADYQLTKLLDLDPSVKRFMFYHL-GCYAGGTV 166 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCEESCHHHHHHHHTTCCTTCEEEEEESC-CTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHcCcCCCcceeeeEcc-ccHHHHHH
Confidence 1235556788899999999999999999999999999987655788999999999999986664 999986 99999999
Q ss_pred HHHHHHHHHcCCCCEEEEEEecCCCCCCCCCCC--ccccccccccccceEEEEEeeccccc-ccchhhccceeeeeeccC
Q 010144 230 VDLVQQLFRTYKNKLAIVVSTESMGPNWYCGRE--KSMMLSNILFRSGGCSMLLTNNRALK-HKAILKLNCLVRTHFGSN 306 (517)
Q Consensus 230 L~lA~~lL~ag~~~~aLVVs~E~~s~~~~~~~d--r~~lv~~~lfGDGAAAvLLs~~~~~~-~~~~~~l~~i~~t~~~td 306 (517)
|.+|.++|++|..++||||++|.+|..+.++.| ++......+|||||+|+||++.+... ..+.+++.+.... ...+
T Consensus 167 l~~A~~~i~~g~~~~vLvvg~e~~s~~~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~~~~~~~~~l~~~~~~-~~p~ 245 (387)
T 3a5r_A 167 LRLAKDIAENNKGARVLIVCSEMTTTCFRGPSETHLDSMIGQAILGDGAAAVIVGADPDLTVERPIFELVSTAQT-IVPE 245 (387)
T ss_dssp HHHHHHHHHHSTTCEEEEEEEECCTTTCCCCCSSCCSSTTHHHHBCCEEEEEEEESSCCTTTCCCCEEEEEEEEE-ECTT
T ss_pred HHHHHHHHHhCCCCEEEEEEEeccchhhcCCCccchhhccccceeccceeEEEEecCCCccccCCceEEEeeeEE-EeCC
Confidence 999999999999999999999999875545443 33334578999999999999765421 0011332221111 1111
Q ss_pred cccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCC
Q 010144 307 DEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGL 386 (517)
Q Consensus 307 ~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~ 386 (517)
+. +.+.+... ..|+ . +.| +.++++++.+.+++.+.++| +++|++
T Consensus 246 ~~--~~~~~~~~---~~g~----------------~------~~~-~~~v~~~~~~~~~~~i~~~L-------~~~gl~- 289 (387)
T 3a5r_A 246 SH--GAIEGHLL---ESGL----------------S------FHL-YKTVPTLISNNIKTCLSDAF-------TPLNIS- 289 (387)
T ss_dssp CT--TSEEEEEE---TTEE----------------E------EEE-CTTHHHHHHHHHHHHHHHHH-------GGGTCC-
T ss_pred Ch--HhcCceEc---CCCe----------------E------EEe-cchHHHHHHHHHHHHHHHHH-------HhcCCC-
Confidence 00 00000000 0000 0 112 24677778888888888888 788987
Q ss_pred CcccccceeecCCCChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCC--------CEEEE
Q 010144 387 NLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKG--------DRILM 458 (517)
Q Consensus 387 d~~~did~~~~Hq~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~G--------d~Vll 458 (517)
|+ +|| +|++||+|+++++.+++.||++++++..|++++++||||+|||+|++|++++++|+ ++| |+|++
T Consensus 290 d~-~di-~~v~Hq~~~~i~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~-~~G~~~~G~~~d~vll 366 (387)
T 3a5r_A 290 DW-NSL-FWIAHPGGPAILDQVTAKVGLEKEKLKVTRQVLKDYGNMSSATVFFIMDEMRKKSL-ENGQATTGEGLEWGVL 366 (387)
T ss_dssp CG-GGS-EEEECCSCHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHHHHHH-HTTCSBTTTTCSEEEE
T ss_pred Ch-hhe-eEEECCCCHHHHHHHHHHcCCChHHhHHHHHHHHhcCCcchhHHHHHHHHHHHhcc-ccCCCCCCCCcceEEE
Confidence 43 789 99999999999999999999999999766678999999999999999999998886 777 99999
Q ss_pred EEechhHHhheeeeEEeccC
Q 010144 459 ISLGAGFKCNNCVWEVMKDL 478 (517)
Q Consensus 459 iafG~G~t~~a~vlr~~~~~ 478 (517)
++||+|++|++++|||...|
T Consensus 367 ~~fG~G~t~~~~ll~~~~~~ 386 (387)
T 3a5r_A 367 FGFGPGITVETVVLRSVPVI 386 (387)
T ss_dssp EEEETTTEEEEEEEEECBCC
T ss_pred EEecCcceeeehhheecccc
Confidence 99999999999999997543
|
| >2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-46 Score=386.44 Aligned_cols=325 Identities=15% Similarity=0.176 Sum_probs=269.2
Q ss_pred CceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhhHH
Q 010144 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMD 162 (517)
Q Consensus 83 ~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~ea~ 162 (517)
++++|.++|+|+|++ +++++++.+.++.. + ++|.+++||++|++..+ ++ +.
T Consensus 4 m~~~I~g~g~~~P~~---~~~~~~~~~~~~~~----~------~~i~~~~Gi~~R~~~~~------~~----------~~ 54 (331)
T 2x3e_A 4 RAAVVCGLGSYLPEA---VLSNDMLAAELDTS----D------AWISSRTGVRQRHIAGD------LG----------SG 54 (331)
T ss_dssp CEEEEEEEEEECCSC---EEEHHHHHHHTTCC----H------HHHHHHHCCCEEECCTT------CC----------HH
T ss_pred ceeEEEEEEEECCCc---EecHHHHHHHhCCC----H------HHHHHhhCceEEEecCC------CC----------HH
Confidence 468999999999999 99999999876532 2 37889999999998643 21 24
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCC
Q 010144 163 EIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYK 241 (517)
Q Consensus 163 ~la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~ 241 (517)
+|+.+|+++||+++|+ +|||.||+++ ++++..|+.+.+|+++||++ +++++++++ +|+|++.||.+|.++|++|.
T Consensus 55 ~la~~Aa~~al~~ag~--~~id~vi~~t~~~~~~~p~~a~~v~~~lgl~-~~~~~~v~~-aCas~~~Al~~A~~~i~~g~ 130 (331)
T 2x3e_A 55 DLALRAASAALASAGL--ERVDAVVLATSTGDFCCPATAPRVAARLGLV-GALAFDLSA-AATGFVYGLASVGSLISAGL 130 (331)
T ss_dssp HHHHHHHHHHHHHHTC--SCCSEEEEECSSCSEEESCSHHHHHHHTTCT-TSEEEEEEC-GGGHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHhCCc--ccCCEEEEEeCCCCCCCChHHHHHHHHhCCC-CCcEEEEcC-cChHHHHHHHHHHHHHHcCC
Confidence 5689999999999999 8999999875 56777899999999999998 489999986 99999999999999999999
Q ss_pred CCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccccceeeccccCC
Q 010144 242 NKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQG 321 (517)
Q Consensus 242 ~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~~~~~~~~g 321 (517)
.++|||+++|.++. +.++.|+.. ..+|||||+|+||++.+... +. +++.+...+|+..++.+..+.++.
T Consensus 131 ~~~vLv~g~e~~s~-~~~~~d~~~---~~~~GdGA~A~vL~~~~~a~---~~---~i~~~~~~~dg~~~~~~~~p~~~~- 199 (331)
T 2x3e_A 131 ADSALLVGVDTFSH-TLDPADRST---RALFGDGAGAVVLRAGDAEE---EG---ALLAFDLGSDGHQFDLLMTPAVSR- 199 (331)
T ss_dssp CSEEEEEEEECGGG-GSCTTCHHH---HHHBCCEEEEEEEEEECTTS---TT---BEEEEEEEECGGGTTSEEEECCCH-
T ss_pred CCEEEEEEeecccc-CCCcccccc---ceeeccccEEEEEEecCCCC---CC---ceEEEEEEEcCCCCCeEEecCCCC-
Confidence 99999999999886 445556654 67999999999999765211 01 245556677877666666553210
Q ss_pred CCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCC
Q 010144 322 HPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGG 401 (517)
Q Consensus 322 ~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~ 401 (517)
..|.. . ...+.+.|++.++|++....+++.++++| +++|+++ +|||+|++||+|
T Consensus 200 --------~~p~~----~----~~~~~~~~~g~~v~~~~~~~~~~~i~~aL-------~~agl~~---~did~~~~H~~~ 253 (331)
T 2x3e_A 200 --------AERSS----G----QASNYFRMDGKAVFGQAVTQMSDSVRRVL-------DRVGWQA---SDLHHLVPHQAN 253 (331)
T ss_dssp --------HHHHH----T----CCCCCCEECHHHHHHHHHHHHHHHHHHHH-------HHHTCCG---GGCSEEEECCCC
T ss_pred --------CCCCc----c----CcCceEEecCHHHHHHHHHHHHHHHHHHH-------HHcCCCH---HHCCEEEEcCCC
Confidence 01110 0 12234567789999999999999999998 8999996 999999999999
Q ss_pred hHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEEEechhHHhheeeeEEeccCCC
Q 010144 402 RAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLED 480 (517)
Q Consensus 402 ~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~VlliafG~G~t~~a~vlr~~~~~~~ 480 (517)
.++++.+++.||++++++ ..++.+||||+|||+|+.|+++++++++++||+|++++||+|++|+++++||...+++
T Consensus 254 ~~~~d~~~~~lg~~~~~~---~~~~~~~Gnt~sAs~~~~L~~~~~~~~~~~G~~vll~~~G~G~~~~~~~l~~~~~~~~ 329 (331)
T 2x3e_A 254 TRILAAVADQLDLPVERV---VSNIAEVGNTVAASIPLALAHGLRQGILRDGGNMVLTGFGAGLTWGSVALRWPKIVPT 329 (331)
T ss_dssp HHHHHHHHHHHTCCGGGB---CCCHHHHCBCGGGHHHHHHHHHHHTTCSCTTCEEEEEEEETTTEEEEEEEECCCCCC-
T ss_pred HHHHHHHHHHcCCCHHHH---hhhHhhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEeHHhhheeeEEEECCcccC
Confidence 999999999999999998 4678999999999999999999999999999999999999999999999999766654
|
| >1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-46 Score=394.45 Aligned_cols=341 Identities=16% Similarity=0.192 Sum_probs=263.6
Q ss_pred ceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCC-CcCCCCC-CccHHHhHhhH
Q 010144 84 CCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRN-VVEGREE-SPSLAEAFSEM 161 (517)
Q Consensus 84 ~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~-~~~~~~~-~~~m~~~~~ea 161 (517)
.++|+++|+|+|++ +++++++.+.++... .+.+..++.++|++++||++|+++.+. .+...+. ...++.+.+.+
T Consensus 9 m~~I~gig~~~P~~---~v~~~~l~~~~~~~~-~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~~~r~~~~~~~~ 84 (382)
T 1u0m_A 9 MATLCRPSVSVPEH---VITMEETLELARRRH-TDHPQLPLALRLIENTGVRTRHIVQPIEDTLEHPGFEDRNKVYEREA 84 (382)
T ss_dssp -CEECCCEEECCSE---EEEHHHHHHHHHHHH-TTCTTHHHHHHHHHHTCCCEEEESSCHHHHTSCCCHHHHHHHHHHHH
T ss_pred ceEEEEEEEeCCCc---ccCHHHHHHHHHHhc-cChhhHHHHHHHHHhcCCCcceeecChhhhccCCChhHHHHHHHHHH
Confidence 37999999999999 999999998876542 122223566789999999999987541 1111111 12455567788
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEe-cCCcchHHHHHHHHHHHHHHcC
Q 010144 162 DEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNL-SGMGCSASVVAVDLVQQLFRTY 240 (517)
Q Consensus 162 ~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl-~~mgCsggl~AL~lA~~lL~ag 240 (517)
.+|+.+|+++||+++|++|++||.||++++..+..|+.+.+|+++||++++++++++ ++ +|+|++.||.+|.++|++|
T Consensus 85 ~~la~~Aa~~aL~~agl~~~~id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~-aCss~~~Al~~A~~~i~~g 163 (382)
T 1u0m_A 85 KSRVPAVIQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTRQIPIAQL-GCAAGGAAINRAHDFCTAY 163 (382)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCSEEEEECSSSCCSSCHHHHHHHHTTCCTTCEEEEECSC-GGGHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhCCCHHHCCEEEEEecCCCCCCcHHHHHHHHhCCCCCcceEEccCC-cCHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999865447789999999999999877999999 65 9999999999999999999
Q ss_pred CCCEEEEEEecCCCCCCCCCCCc--cccccccccccceEEEEEeecccccccchhhccceeeeee--ccCcccccceeec
Q 010144 241 KNKLAIVVSTESMGPNWYCGREK--SMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHF--GSNDEAYECCMQV 316 (517)
Q Consensus 241 ~~~~aLVVs~E~~s~~~~~~~dr--~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~--~td~~~~~~~~~~ 316 (517)
+.++|||+++|.++. +.++.|+ ++.+..++|||||+|+||++.+.. +++ ++.... .+++. +.+.+.
T Consensus 164 ~~~~vLv~g~e~~s~-~~~~~d~~~~~~~~~~lfGDGA~A~vL~~~~~~----g~~---i~~~~~~~~~~~~--~~~~~~ 233 (382)
T 1u0m_A 164 PEANALIVACEFCSL-CYQPTDLGVGSLLCNGLFGDGIAAAVVRGRGGT----GVR---LERNGSYLIPKTE--DWIMYD 233 (382)
T ss_dssp TTCEEEEEEEEEGGG-GCCTTCCSHHHHHHHHHBCEEEEEEEEETTTCS----EEE---EEEEEEEECSSCT--TTEEEE
T ss_pred CCCEEEEEEEeccch-hcCcccCCHHHhhccchhcCCcEEEEEeccCCC----CcE---EEEeeeEecCChH--HhcCce
Confidence 999999999999886 3344443 344446899999999999976531 233 333333 23332 222111
Q ss_pred cccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceee
Q 010144 317 EDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFC 396 (517)
Q Consensus 317 ~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~ 396 (517)
... .|+.+. .+ .+++++....++ .+.++| +++|+++ +|||+|+
T Consensus 234 ~~~---~g~~~~-----------------~~------~~v~~~~~~~~~-~i~~aL-------~~agl~~---~dId~v~ 276 (382)
T 1u0m_A 234 VKA---TGFHFL-----------------LD------KRVPATMEPLAP-ALKELA-------GEHGWDA---SDLDFYI 276 (382)
T ss_dssp EET---TEEEEE-----------------EC------TTTGGGHHHHHH-HHHHHH-------HTTSCCS---SCCSCCE
T ss_pred ecC---CceEEE-----------------eC------cHHHHHHHHHHH-HHHHHH-------HHcCCCH---HHCCEEE
Confidence 100 011000 00 122333334455 667777 7899996 8999999
Q ss_pred cCCCChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEEEechhHHhheeeeEEec
Q 010144 397 LHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMK 476 (517)
Q Consensus 397 ~Hq~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~VlliafG~G~t~~a~vlr~~~ 476 (517)
+||+|.++++.+++.||++++++..|+.++++||||+|||+|+.|++++++|++++||+|++++||+|++|+++++||..
T Consensus 277 ~H~~~~~i~d~~~~~lgl~~~k~~~s~~~~~~~Gnt~sAsi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~vl~~~~ 356 (382)
T 1u0m_A 277 VHAGGPRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRLFDEGGVEEGARGLLAGFGPGITAEMSLGCWQT 356 (382)
T ss_dssp EECSHHHHHHHHHHHSCSCGGGGHHHHHHHHHTCBCTTHHHHHHHHHHHHSCCCCSSCCCEEEEEETTTEEEEEEEEEEC
T ss_pred ECCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHhcCCCCCCEEEEEEEcccceeEEEEEEEee
Confidence 99999999999999999999999777789999999999999999999999999999999999999999999999999964
|
| >1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-45 Score=379.69 Aligned_cols=324 Identities=16% Similarity=0.206 Sum_probs=265.1
Q ss_pred CCCceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhh
Q 010144 81 RGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSE 160 (517)
Q Consensus 81 ~~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~e 160 (517)
..++++|.++|+|+|+. +++++++.+.++. ++ +++.+++||++|++..+. ++
T Consensus 8 ~~~~~~I~gig~~~P~~---~~~~~~~~~~~~~----~~------~~i~~~~Gi~~R~~~~~~-----~~---------- 59 (339)
T 1mzj_A 8 ERRFSRVLGVGSYRPRR---EVSNKEVCTWIDS----TE------EWIETRTGIRSRRIAEPD-----ET---------- 59 (339)
T ss_dssp CCCEEEEEEEEEECCSC---EEEHHHHTTTSSC----CH------HHHHHHHCCSEEECCCTT-----CC----------
T ss_pred ccCceEEEEEEEeCCCc---cccHHHHHHHhCC----CH------HHHHHhcCceEEEEeCCC-----CC----------
Confidence 34569999999999999 9999999876542 22 268899999999987542 22
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHc
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~a 239 (517)
..+|+.+|+++||+++|++|++||.||+++ ++++..|+.+.+|+.+||++ +++++++++ +|+|++.||.+|.++|++
T Consensus 60 ~~~la~~Aa~~al~~ag~~~~~id~vi~gt~~~~~~~p~~a~~v~~~lgl~-~~~~~~v~~-aCas~~~Al~~A~~~i~~ 137 (339)
T 1mzj_A 60 IQVMGVAASRRALEHAGVDPAEIDLVVVSTMTNFVHTPPLSVAIAHELGAD-NAGGFDLSA-ACAGFCHALSIAADAVES 137 (339)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCCSSCHHHHHHHHHTCT-TCEEEEEEC-GGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCChHHHHHHHHhCCC-CccEEEccc-cchHHHHHHHHHHHHHHC
Confidence 235689999999999999999999999875 57777999999999999998 489999996 999999999999999999
Q ss_pred CCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccccceeecccc
Q 010144 240 YKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQ 319 (517)
Q Consensus 240 g~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~~~~~~~ 319 (517)
|..++|||+++|.++. ..++.|+.. ..+|||||+|+||++.+.. +++.+...+|+..++.++.+ +
T Consensus 138 G~~~~vLv~g~e~~s~-~~~~~d~~~---~~~~GdGA~A~vL~~~~~~---------~i~~~~~~~~g~~~~~~~~~-g- 202 (339)
T 1mzj_A 138 GGSRHVLVVATERMTD-VIDLADRSL---SFLFGDGAGAAVVGPSDVP---------GIGPVVRGIDGTGLGSLHMS-S- 202 (339)
T ss_dssp SSCSCEEEEEEEEGGG-GSCSSCTTT---TTTBCEEEEEEEEEEESSC---------CBCCCEEEECGGGGGGEEES-C-
T ss_pred CCCCEEEEEEEccccc-ccCcccccc---ceEeccCceEEEEEecCCC---------CeEEEEEEEcCCCCCeEEec-C-
Confidence 9999999999999886 344455543 6899999999999976432 23344556777666655542 0
Q ss_pred CCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCC
Q 010144 320 QGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHP 399 (517)
Q Consensus 320 ~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq 399 (517)
. .|... +... ...+.+.|++.+++++....+++.++++| +++|+++ +|||+|++||
T Consensus 203 -----~-----~p~~~-~~~~---~~~~~~~~~g~~v~~~~~~~~~~~i~~aL-------~~agl~~---~did~v~~H~ 258 (339)
T 1mzj_A 203 -----S-----WDQYV-EDPS---VGRPALVMDGKRVFRWAVADVVPAAREAL-------EVAGLTV---GDLVAFVPHQ 258 (339)
T ss_dssp -----C-----HHHHT-TCSS---SCSCCEEECHHHHHHHHHHHHHHHHHHHH-------HTTTCCG---GGCSEEEECC
T ss_pred -----C-----CCCcc-cccc---cccceEEeeCHHHHHHHHHHHHHHHHHHH-------HHcCCCH---HHCCEEEECC
Confidence 0 01100 0000 01123456778999999889999999988 8899996 9999999999
Q ss_pred CChHHHHHHHhhCCCCcc-cchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEEEechhHHhheeeeEEec
Q 010144 400 GGRAVIDGTGKGLELDEY-DLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMK 476 (517)
Q Consensus 400 ~~~~il~~i~~~Lgl~~e-~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~VlliafG~G~t~~a~vlr~~~ 476 (517)
.|.++++.+++.||++++ ++ ..++.+||||+|||+++.|++++++|++++||+|++++||+|++|+++++||..
T Consensus 259 ~~~~~~d~i~~~lg~~~~~~~---~~~~~~~Gn~~sAs~~~~L~~~~~~g~~~~G~~vll~~~G~G~t~~~~~l~~~~ 333 (339)
T 1mzj_A 259 ANLRIIDVLVDRLGVPEHVVV---SRDAEDTGNTSSASVALALDRLVRSGAVPGGGPALMIGFGAGLSYAGQALLLPD 333 (339)
T ss_dssp SCHHHHHHHHHHHTCCTTSEE---CCTHHHHCBCTTHHHHHHHHHHHHHTSSCTTCEEEEEEEETTTEEEEEEEECCC
T ss_pred CCHHHHHHHHHHhCCCcccee---eehhhhcCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhheeEEEEEEeCC
Confidence 999999999999999999 88 467899999999999999999999999999999999999999999999999953
|
| >1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-45 Score=372.22 Aligned_cols=315 Identities=18% Similarity=0.250 Sum_probs=262.3
Q ss_pred ceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhhHHH
Q 010144 84 CCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDE 163 (517)
Q Consensus 84 ~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~ea~~ 163 (517)
+++|.++++|+|++ +++++++.+..+. ++ +++.+++||++|++..+. ++ +.+
T Consensus 2 ~~~I~~~g~~~P~~---~~~~~~~~~~~~~----~~------~~i~~~~Gi~~r~~~~~~-----~~----------~~~ 53 (317)
T 1hnj_A 2 YTKIIGTGSYLPEQ---VRTNADLEKMVDT----SD------EWIVTRTGIRERHIAAPN-----ET----------VST 53 (317)
T ss_dssp EEEEEEEEEECCSE---EEEHHHHHTTSSC----CH------HHHHHHHCCCEEEECCTT-----CC----------HHH
T ss_pred CcEEEEEEEeCCCc---eecHHHHHHHhCC----CH------HHHHHHhCceEEEecCCC-----CC----------HHH
Confidence 58999999999999 9999999876542 22 268899999999987542 22 235
Q ss_pred HHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCC
Q 010144 164 IIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKN 242 (517)
Q Consensus 164 la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~ 242 (517)
|+.+|+++||+++|++|++||.|++++ ++++..|+.+.+|+.+||++ +.+++++++ +|+|++.||.+|.++|++|..
T Consensus 54 l~~~a~~~al~~ag~~~~~id~vi~g~~~~~~~~~~~a~~v~~~lgl~-~~~~~~v~~-aCas~~~al~~A~~~i~~g~~ 131 (317)
T 1hnj_A 54 MGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIK-GCPAFDVAA-ACAGFTYALSVADQYVKSGAV 131 (317)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCC-SSCEEEECC-GGGHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC-CCeEEeeCc-ccHHHHHHHHHHHHHHHCCCC
Confidence 689999999999999999999999875 57777899999999999997 489999986 999999999999999999999
Q ss_pred CEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccccceeeccccCCC
Q 010144 243 KLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGH 322 (517)
Q Consensus 243 ~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~~~~~~~~g~ 322 (517)
++|||+++|.++. ..++.|+.. ..+|||||+|+||++.+.. ++......+++...+.++.+. +..
T Consensus 132 ~~vlv~g~e~~s~-~~~~~d~~~---~~~~GdGA~A~vL~~~~~~---------~i~~~~~~~~g~~~~~~~~~~-~~~- 196 (317)
T 1hnj_A 132 KYALVVGSDVLAR-TCDPTDRGT---IIIFGDGAGAAVLAASEEP---------GIISTHLHADGSYGELLTLPN-ADR- 196 (317)
T ss_dssp SEEEEEEEECHHH-HSCTTCHHH---HTTBCCEEEEEEEEEESSC---------SEEEEEEEECGGGGGGEECCC-CCS-
T ss_pred CEEEEEEechhcc-cCCchhccc---ceeeccccEEEEEEecCCC---------ceeeEEEEEcCCCCCeEEECC-CCC-
Confidence 9999999999876 344456653 6899999999999976532 244455667776666665543 110
Q ss_pred CCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCCh
Q 010144 323 PGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGR 402 (517)
Q Consensus 323 ~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~ 402 (517)
.. + +..+.+.+++.+++++..+.+++.++++| +++|++| +|||+|++||+|.
T Consensus 197 ----~~-~-------------~~~~~~~~~g~~~~~~~~~~~~~~i~~aL-------~~agl~~---~did~v~~H~~~~ 248 (317)
T 1hnj_A 197 ----VN-P-------------ENSIHLTMAGNEVFKVAVTELAHIVDETL-------AANNLDR---SQLDWLVPHQANL 248 (317)
T ss_dssp ----SC-T-------------TSCCSCEECHHHHHHHHHHHHHHHHHHHH-------HHTTCCG---GGCCEEEECCSCH
T ss_pred ----CC-C-------------CCCceEEecCHHHHHHHHHHHHHHHHHHH-------HHcCCCH---HHCCEEEEcCCCH
Confidence 00 0 01122345678889998888999999988 8999996 8999999999999
Q ss_pred HHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEEEechhHHhheeeeEE
Q 010144 403 AVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEV 474 (517)
Q Consensus 403 ~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~VlliafG~G~t~~a~vlr~ 474 (517)
++++.+++.||++++++ ..++.++|||++||++++|++++++|++++||+|++++||+|++|+++++||
T Consensus 249 ~~~d~i~~~lg~~~~~~---~~~~~~~Gn~~~As~~~~L~~~~~~~~~~~G~~vll~~~G~G~t~~~~~l~~ 317 (317)
T 1hnj_A 249 RIISATAKKLGMSMDNV---VVTLDRHGNTSAASVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWGSALVRF 317 (317)
T ss_dssp HHHHHHHHHTTCCGGGB---CCCHHHHCBCGGGHHHHHHHHHHHTTCSCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHHHHcCCCHHHh---HhhHhhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEchhheeEEEEEEC
Confidence 99999999999999998 5789999999999999999999999999999999999999999999999986
|
| >1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=360.88 Aligned_cols=309 Identities=15% Similarity=0.261 Sum_probs=258.2
Q ss_pred ceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhhHHH
Q 010144 84 CCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDE 163 (517)
Q Consensus 84 ~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~ea~~ 163 (517)
+++|.++++|+|++ +++++++.+..+. ++ +++.+++||++|++..++ ++ +.+
T Consensus 2 ~~~I~~~g~~~P~~---~~~~~~~~~~~~~----~~------~~i~~~~gi~~r~~~~~~-----~~----------~~~ 53 (313)
T 1zow_A 2 NVGIKGFGAYAPEK---IIDNAYFEQFLDT----SD------EWISKMTGIKERHWADDD-----QD----------TSD 53 (313)
T ss_dssp CEEEEEEEEECCSC---EEEGGGGGGTSSC----CH------HHHHHHHCCSEEECCCTT-----CC----------HHH
T ss_pred ceEEEEEEEECCCc---cccHHHHHHhcCC----CH------HHHHHhhCceEEEecCCC-----CC----------HHH
Confidence 58999999999999 9999999875442 22 268899999999986542 22 235
Q ss_pred HHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCC
Q 010144 164 IIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKN 242 (517)
Q Consensus 164 la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~ 242 (517)
|+.+|+++||+++|++|++||.|++++ ++++..|+++.+|+.+||++ +++++++++ +|+|++.||.+|.++|++|..
T Consensus 54 l~~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lgl~-~~~~~~v~~-aCas~~~al~~A~~~i~~g~~ 131 (313)
T 1zow_A 54 LAYEASVKAIADAGIQPEDIDMIIVATATGDMPFPTVANMLQERLGTG-KVASMDQLA-ACSGFMYSMITAKQYVQSGDY 131 (313)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHHTCC-SCCEEEEEC-GGGHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC-CCcEEEECC-cCHHHHHHHHHHHHHHHCCCC
Confidence 689999999999999999999999875 56778899999999999997 489999985 999999999999999999999
Q ss_pred CEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccccceeeccccCCC
Q 010144 243 KLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGH 322 (517)
Q Consensus 243 ~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~~~~~~~~g~ 322 (517)
++|||+++|.++. ..++.|+.. .++|||||+|+||++.+... +++.+...+++...+.++.+.. .
T Consensus 132 ~~vLv~g~e~~s~-~~~~~d~~~---~~~~gdGa~A~vl~~~~~~~--------~i~~~~~~~~g~~~~~~~~~~~---~ 196 (313)
T 1zow_A 132 HNILVVGADKLSK-ITDLTDRST---AVLFGDGAGAVIIGEVSEGR--------GIISYEMGSDGTGGKHLYLDKD---T 196 (313)
T ss_dssp SCEEEEEEEEGGG-TCCTTCHHH---HTTBCEEEEEEEEEECSTTC--------EEEEEEEEECGGGGGGEEECTT---T
T ss_pred CEEEEEEEccccc-ccCcccccc---eeeeccceEEEEEEecCCCC--------ceeEEEEEEcCCCcCeEEecCC---C
Confidence 9999999999876 345556553 78999999999999876421 2444556667666555554320 0
Q ss_pred CCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCCh
Q 010144 323 PGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGR 402 (517)
Q Consensus 323 ~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~ 402 (517)
. .+.|++.+++++....+.+.++++| +++|+++ +|||+|++||.|.
T Consensus 197 ~------------------------~~~~~g~~~~~~~~~~~~~~i~~al-------~~agl~~---~did~~~~H~~~~ 242 (313)
T 1zow_A 197 G------------------------KLKMNGREVFKFAVRIMGDASTRVV-------EKANLTS---DDIDLFIPHQANI 242 (313)
T ss_dssp C------------------------CEEECHHHHHHHHHHHHHHHHHHHH-------HHTTCCG---GGCSEEEECCSCH
T ss_pred C------------------------eeEeccHHHHHHHHHHHHHHHHHHH-------HHcCCCH---HHCCEEEEcCCCH
Confidence 0 0123456677777777888888888 8999996 9999999999999
Q ss_pred HHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEEEechhHHhheeeeEE
Q 010144 403 AVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEV 474 (517)
Q Consensus 403 ~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~VlliafG~G~t~~a~vlr~ 474 (517)
++++.+.+.||++++++ ..++.+|||+++||+++.|+++++++++++||++++++||+|++|+++++||
T Consensus 243 ~~~d~~~~~lg~~~~~~---~~~~~~~Gh~~~as~~~~L~~~~~~~~~~~g~~vl~~~~G~G~t~~~~~l~~ 311 (313)
T 1zow_A 243 RIMESARERLGISKDKM---SVSVNKYGNTSAASIPLSIDQELKNGKLKDDDTIVLVGFGGGLTWGAMTIKW 311 (313)
T ss_dssp HHHHHHHHHHTCCGGGB---CCCHHHHCBCGGGHHHHHHHHHHHTTCCCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHHHHhCCCHHHH---HHhHhhhCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhheEEEEEe
Confidence 99999999999999998 4679999999999999999999999999999999999999999999999998
|
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-44 Score=416.10 Aligned_cols=356 Identities=16% Similarity=0.161 Sum_probs=265.6
Q ss_pred CCCceEEEEEEEEeCCCCCceecHHHHHHHHHhcc--cCChHHHHHHHHHHHHhCCceeEeccCCCc---------CCCC
Q 010144 81 RGQCCYMLAYECYKPCDETRRLDTESCARVVWRNK--KLGLEEYRFLLKNMVSSGIGEETYGPRNVV---------EGRE 149 (517)
Q Consensus 81 ~~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~--~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~---------~~~~ 149 (517)
..++++|+++|+|+|+. +++|+++.+.+...+ .+-+...+..+++.+++||++|+++.+... ..++
T Consensus 600 ~~~~~~I~g~g~~~P~~---~v~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ 676 (979)
T 3tsy_A 600 AKGPATILAIGTATPDH---CVYQSDYADYYFKVTKSEHMTALKKKFNRICDKSMIKKRYIHLTEEMLEEHPNIGAYMAP 676 (979)
T ss_dssp CCSCEEEEEEEEECCSC---EEEHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTCCCEEECSCCHHHHHHCHHHHSSSSC
T ss_pred ccCCceeecccCCCCCC---ccCHHHHHHHHHHhccccchHHHHHHHHHHHHhcCcceeeEecChhhhhcCcccccccCC
Confidence 45679999999999999 999999999853221 111222233456899999999998865321 0111
Q ss_pred C-CccHHHhHhhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCC-eeEEEecCCcchHHH
Q 010144 150 E-SPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRND-IKAFNLSGMGCSASV 227 (517)
Q Consensus 150 ~-~~~m~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~-~~~~dl~~mgCsggl 227 (517)
. ...+..+.+++.+|+.+|+++||+++|++|+|||+||++|++++..|+++++|+++||+++. +.++|+++ ||+|++
T Consensus 677 ~~~~r~~~~~~~~~~la~~Aa~~AL~~agl~~~dId~ii~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~~-aCsg~~ 755 (979)
T 3tsy_A 677 SLNIRQEIITAEVPKLGKEAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLEPSVRRVMLYHQ-GCYAGG 755 (979)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEESC-CTTHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHcCCCcccEEEeeecc-ccHhHH
Confidence 1 11233445678999999999999999999999999999998889999999999999999844 57999996 999999
Q ss_pred HHHHHHHHHHHcCCCCEEEEEEecCCCCCCCCCCC--ccccccccccccceEEEEEeeccccc-ccchhhccceeeeeec
Q 010144 228 VAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGRE--KSMMLSNILFRSGGCSMLLTNNRALK-HKAILKLNCLVRTHFG 304 (517)
Q Consensus 228 ~AL~lA~~lL~ag~~~~aLVVs~E~~s~~~~~~~d--r~~lv~~~lfGDGAAAvLLs~~~~~~-~~~~~~l~~i~~t~~~ 304 (517)
.||.+|.++|++|..++||||++|.++.++..... .+.++..++|||||+|+||++.+... ..+.+........ ..
T Consensus 756 ~Al~~A~~~i~sG~~~~vLvvg~e~~~~~~~~~~~~~~~~~~~~~lfGDGA~A~vL~~~~~~~~~~~~~~~~~~~~~-~~ 834 (979)
T 3tsy_A 756 TVLRTAKDLAENNAGARVLVVCSEITVVTFRGPSEDALDSLVGQALFGDGSAAVIVGSDPDISIERPLFQLVSAAQT-FI 834 (979)
T ss_dssp HHHHHHHHHHHTSTTCEEEEEEEECTTTTCCCCCSSCHHHHHHHHHBCCEEEEEEEESSCCSSSCCCCEEEEEEEEE-EC
T ss_pred HHHHHHHHHHHhCCCCEEEEEEEEecchheeCCCccCHHHHhhhhhccCceEEEEEecCCCccccCcceEEEeeeeE-Ee
Confidence 99999999999999999999999998875543322 22344568999999999999865421 1111211111000 00
Q ss_pred cCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCC
Q 010144 305 SNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGA 384 (517)
Q Consensus 305 td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~ 384 (517)
.+. ........ ...|...+.+.++++++...+.+.+.+++ +++|+
T Consensus 835 ~~~--~~~~~~~~--------------------------~~~~~~~~~~~~v~~~~~~~~~~~~~~al-------~~agl 879 (979)
T 3tsy_A 835 PNS--AGAIAGNL--------------------------REVGLTFHLWPNVPTLISENVEKCLTQAF-------DPLGI 879 (979)
T ss_dssp TTC--TTSEEEEE--------------------------ETTEEEEEECTTHHHHHHHHHHHHHHHHH-------GGGTC
T ss_pred cCc--hhheEEEE--------------------------ecCceEEEEchHHHHHHHHHHHHHHHHHH-------hhcCC
Confidence 110 00000000 00011112225667777778888888888 89999
Q ss_pred CCCcccccceeecCCCChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHc----CCCCCC---CEEE
Q 010144 385 GLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAK----KRLKKG---DRIL 457 (517)
Q Consensus 385 ~~d~~~did~~~~Hq~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~----g~i~~G---d~Vl 457 (517)
++ +|||+|++||+|.++++.++++||++++++..+++++++||||||||+|++|+++.++ +++++| |+++
T Consensus 880 ~~---~did~~~~Hq~~~~i~~~~~~~lgl~~~k~~~~~~~l~~~GNtssasi~~~L~~~~~~~~~G~~v~~g~~~~~~l 956 (979)
T 3tsy_A 880 SD---WNSLFWIAHPGGPAILDAVEAKLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMRKKSLKGERATTGEGLDWGV 956 (979)
T ss_dssp CC---GGGSEEEECCSCHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCTTHHHHHHHHHHHHHHHHTTCSBTTTTCSEEE
T ss_pred CC---cccceEEECCCChHHHHHHHHHcCCChHHHHHHHHHHHHcCCcchhhHHHHHHHHHhhhcccccccCCCCcceeE
Confidence 97 9999999999999999999999999999998777789999999999999999998763 233333 4459
Q ss_pred EEEechhHHhheeeeEEeccCC
Q 010144 458 MISLGAGFKCNNCVWEVMKDLE 479 (517)
Q Consensus 458 liafG~G~t~~a~vlr~~~~~~ 479 (517)
++|||+|++|+++++||.+.++
T Consensus 957 l~~~G~G~t~~~~~l~~~~~~~ 978 (979)
T 3tsy_A 957 LFGFGPGLTIETVVLHSIPMVT 978 (979)
T ss_dssp EEEECGGGEEEEEEEECCBCCC
T ss_pred EEEeCCchHHHHHHHHhccccC
Confidence 9999999999999999988765
|
| >3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-44 Score=379.81 Aligned_cols=310 Identities=13% Similarity=0.129 Sum_probs=252.4
Q ss_pred CCceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhhH
Q 010144 82 GQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEM 161 (517)
Q Consensus 82 ~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~ea 161 (517)
.++|+|.++|+|+|++ +++++++.+..+. +++ |+.+++|+++|++++++ ++..
T Consensus 5 ~m~v~I~~~g~y~P~~---~v~~~~l~~~~g~----~~~------~~~~~~Gi~~r~~~~~~-----e~~~--------- 57 (388)
T 3v4n_A 5 SMTIGIDKISFFVPPY---YIDMTALAEARNV----DPG------KFHIGIGQDQMAVNPIS-----QDIV--------- 57 (388)
T ss_dssp SCCEEEEEEEEECCSE---EEEHHHHHHHTTS----CTH------HHHTTTCCCEEECCCTT-----CCHH---------
T ss_pred ceeEEEEEEEEECCCe---EEcHHHHHHHhCC----CHH------HHHHHhCceEEEECCCC-----CCHH---------
Confidence 4689999999999999 9999999988754 233 57788999999987653 4433
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcC
Q 010144 162 DEIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTY 240 (517)
Q Consensus 162 ~~la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag 240 (517)
+|+.+|+++||+++| |+|||+||+++ ++++..|+.+++|+++||++++++++|+++ +|+|++.||++|.+++++|
T Consensus 58 -~La~~Aa~~aL~~a~--~~~Id~li~~t~t~~~~~ps~a~~v~~~LGl~~~~~~~dv~~-aC~gg~~AL~~A~~~i~sg 133 (388)
T 3v4n_A 58 -TFAANAAEAILTKED--KEAIDMVIVGTESSIDESKAAAVVLHRLMGIQPFARSFEIKE-AXYGATAGLQLAKNHVALH 133 (388)
T ss_dssp -HHHHHHHHTTCCHHH--HHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSCEEEEEES-GGGHHHHHHHHHHHHHHHC
T ss_pred -HHHHHHHHHHHHhCC--cccCCEEEEEeccCCCcCccHHHHHHHHcCCCCCceEeehhh-hhhHHHHHHHHHHHHHhcC
Confidence 457999999999987 99999999975 678889999999999999987799999996 9999999999999999999
Q ss_pred CCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccccce--eeccc
Q 010144 241 KNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECC--MQVED 318 (517)
Q Consensus 241 ~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~--~~~~~ 318 (517)
+.++||||++|.++.. .++.+ ..+|||||+|+||++++.. +..+..+++...+.+ +.+.+
T Consensus 134 ~~~~vLVvg~e~~s~~-~~~~~------~~lfGDGA~A~ll~~~~~i-----------l~~~~~~~~~~~~~~df~~p~~ 195 (388)
T 3v4n_A 134 PDKKVLVVAADIAKYG-LNSGG------EPTQGAGAVAMLVSSEPRI-----------LALKEDNVMLTQDIYDFWRPTG 195 (388)
T ss_dssp TTCEEEEEEEEEECCC-TTCTT------GGGCEEEEEEEEEEESCSS-----------EEECSCCEEEECCCCSEECBTT
T ss_pred CCCEEEEEEehhhccc-CCCCC------CCccccceeEEEeecCCCc-----------eEEeccccccchhccccccCCC
Confidence 9999999999999873 33333 3689999999999986531 222222332222211 22211
Q ss_pred cCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecC
Q 010144 319 QQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLH 398 (517)
Q Consensus 319 ~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~H 398 (517)
.+ ...+++...++++.+.+++.+.+++ ++.|+++ +|||+|++|
T Consensus 196 ----~~-----------------------~~~~~g~~~~~~~~~~~~~~~~~~l-------~~~g~~~---~did~~v~H 238 (388)
T 3v4n_A 196 ----HP-----------------------YPMVDGPLSNETYIQSFAQVWDEHK-------KRTGLDF---ADYDALAFH 238 (388)
T ss_dssp ----CS-----------------------SCEECHHHHHHHHHHHHHHHHHHHH-------HHHCCCG---GGCSEEEEC
T ss_pred ----CC-----------------------CceeccHhHHHHHHHHHHHHHHHHH-------HHhCCCH---HHCCEEEeC
Confidence 00 1123456677777888888888888 8999995 999999999
Q ss_pred C--------CChHHH----HHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHc-CCCCCCCEEEEEEechhH
Q 010144 399 P--------GGRAVI----DGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAK-KRLKKGDRILMISLGAGF 465 (517)
Q Consensus 399 q--------~~~~il----~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~-g~i~~Gd~VlliafG~G~ 465 (517)
| ++++++ +.+++.|+++.++. +.++++||||+|||+|+.|++++++ |++++||+|++++||+|+
T Consensus 239 qp~~k~~~ka~~ril~~~~~~~~~~l~~~~e~~---~~~~~~~GN~~sASi~l~L~~~l~~~g~~~~Gd~ill~s~GsG~ 315 (388)
T 3v4n_A 239 IPYTKMGKKALLAKISDQTEAEQERILARYEES---IIYSRRVGNLYTGSLYLGLISLLENATTLTAGNQIGLFSYGSGA 315 (388)
T ss_dssp CSSHHHHHHHHHHHSTTSCHHHHHHHHHHHHHH---TTTGGGTCCCGGGHHHHHHHHHHHHCSSCCTTCEEEEEEEETTT
T ss_pred CCcchHHHHHHHHHHhcccHHHHHHhCCCHHHH---hhHHHhcCchHHHHHHHHHHHHHHhcCcCCCCCEEEEEEecCcc
Confidence 9 455666 78899999999887 7899999999999999999999998 899999999999999999
Q ss_pred HhheeeeEEeccCCC
Q 010144 466 KCNNCVWEVMKDLED 480 (517)
Q Consensus 466 t~~a~vlr~~~~~~~ 480 (517)
++....+++....+.
T Consensus 316 ~ae~~~~~v~~~~~~ 330 (388)
T 3v4n_A 316 VAEFFTGELVAGYQN 330 (388)
T ss_dssp EEEEEEEEECTTGGG
T ss_pred eeEEEEEEEccCHHH
Confidence 999999999876653
|
| >2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-43 Score=355.30 Aligned_cols=307 Identities=18% Similarity=0.265 Sum_probs=255.2
Q ss_pred ceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhhHHH
Q 010144 84 CCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDE 163 (517)
Q Consensus 84 ~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~ea~~ 163 (517)
+++|.++++|+|+. +++++++.+..+. ++ +++.+++||++|++..+ + ...+
T Consensus 2 ~~~I~~~g~~~P~~---~~~~~~~~~~~~~----~~------~~i~~~~Gi~~r~~~~~------~----------~~~~ 52 (309)
T 2ebd_A 2 GTKIIGTGVYLPKN---VLTNFDLEKIVDT----SD------EWITTRTGIKERRIAKE------E----------TITY 52 (309)
T ss_dssp CEEEEEEEEECCSE---EEEHHHHHTTSSC----CH------HHHHHHHCCCEEEECSS------C----------CHHH
T ss_pred ceEEEEEEEECCCc---eEcHHHHHHHcCC----CH------HHHHHHhCceeeeecCC------C----------CHHH
Confidence 58999999999999 9999999876542 22 26888999999998643 1 1245
Q ss_pred HHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCC
Q 010144 164 IIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKN 242 (517)
Q Consensus 164 la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~ 242 (517)
|+.+|+++||+++|++|++||.|++++ ++++..|+.+.+|+.+||+++ ++++++++ +|++++.||.+|.++|++|..
T Consensus 53 l~~~a~~~al~~ag~~~~~id~v~~~~~~~~~~~~~~a~~v~~~lgl~~-~~~~~v~~-~C~s~~~al~~A~~~i~~g~~ 130 (309)
T 2ebd_A 53 MATQAAKEALREANLSPEELDLIILATLTPQKRFPSTACLVQAQLKAKG-VYAFDISA-ACSGFIYALDIADSFIKSGKA 130 (309)
T ss_dssp HHHHHHHHHHHHHTCCGGGCSEEEEECSSCSSSSSCHHHHHHHHHTCTT-CEEEEEEC-GGGHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCC-ceEEecCc-cchHHHHHHHHHHHHHHCCCC
Confidence 689999999999999999999999875 467778999999999999984 89999996 999999999999999999999
Q ss_pred CEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccccceeeccccCCC
Q 010144 243 KLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGH 322 (517)
Q Consensus 243 ~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~~~~~~~~g~ 322 (517)
+++||+++|.++. +.++.++.. .++|||||+|+||++.+... ++......+|+...+.+..+..
T Consensus 131 ~~vlv~g~e~~s~-~~~~~~~~~---~~~~gdGaaA~vL~~~~~~~--------~i~~~~~~~~g~~~~~~~~p~~---- 194 (309)
T 2ebd_A 131 KNVLVIGAEKLSE-AVDWEDRST---CVLFGDGAGAVVVTRSEDKS--------DILATRMYAEGSLEELLHADNC---- 194 (309)
T ss_dssp SEEEEEEEEEGGG-TCCTTCTTT---TTTBCEEEEEEEEEECSSSC--------EEEEEEEEECGGGGGGEEECTT----
T ss_pred CEEEEEEeccccc-ccCccchhh---ccccccccEEEEEEecCCCC--------ceeEEEEEecCCccceeEeCCC----
Confidence 9999999999887 344445543 68999999999999876431 2345556677765555554310
Q ss_pred CCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCCh
Q 010144 323 PGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGR 402 (517)
Q Consensus 323 ~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~ 402 (517)
+ ...+.+.+++++....+.+.+++++ +++|++| +|||+|++|+.|.
T Consensus 195 -~-----------------------~~~~~g~~~~~~~~~~~~~~i~~al-------~~agl~~---~did~~~~H~~~~ 240 (309)
T 2ebd_A 195 -G-----------------------YIRMKGRELFKVAVRSMEEVCREVL-------EKAGVKP---EEVSLVIPHQANV 240 (309)
T ss_dssp -C-----------------------CEEECHHHHHHHHHHHHHHHHHHHH-------HHHTCCG---GGCSEEEECCSCH
T ss_pred -C-----------------------eEEEccHHHHHHHHHHHHHHHHHHH-------HHcCCCH---HHCCEEEEcCCCH
Confidence 0 0112335566666667778888888 7999996 8999999999999
Q ss_pred HHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEEEechhHHhheeeeEE
Q 010144 403 AVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEV 474 (517)
Q Consensus 403 ~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~VlliafG~G~t~~a~vlr~ 474 (517)
++++.+.+.||++++++ ..++.++||+++||+++.|++++++|++++||++++++||+|++|+++++||
T Consensus 241 ~~~~~~~~~lg~~~~~~---~~~~~~~Gh~~~As~~~~L~~~~~~g~~~~G~~~l~~~~G~G~~~~~~~l~~ 309 (309)
T 2ebd_A 241 RIINALAEKLNIPKEKV---FVNIQKYGNTSAASIPIALHEAIKEGKVKRGDLILMTAMGGGLTWGAVLLRY 309 (309)
T ss_dssp HHHHHHHHHTTCCGGGB---CCCHHHHCBCGGGHHHHHHHHHHHTTCCCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHHHHhCCCHHHh---hhhHhhhcchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhEEEEEEC
Confidence 99999999999999998 4688999999999999999999999999999999999999999999999986
|
| >1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-43 Score=357.30 Aligned_cols=318 Identities=18% Similarity=0.244 Sum_probs=261.9
Q ss_pred eEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhhHHHH
Q 010144 85 CYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDEI 164 (517)
Q Consensus 85 v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~ea~~l 164 (517)
++|.++++|+|++ +++++++.+..+. ++ +++.+++||++|+++.++ ++ +.+|
T Consensus 2 ~~I~~~g~~~P~~---~~~~~~~~~~~~~----~~------~~i~~~~Gi~~r~~~~~~-----~~----------~~~l 53 (322)
T 1ub7_A 2 SGILALGAYVPER---VMTNADFEAYLDT----SD------EWIVTRTGIKERRVAAED-----EY----------TSDL 53 (322)
T ss_dssp CEEEEEEEECCSE---EEEHHHHHTTSSC----CH------HHHHHHTCCCEEEECCTT-----CC----------HHHH
T ss_pred cEEEEEEEECCCc---eecHHHHHHHhCC----CH------HHHHHhcCceEEeecCCC-----CC----------HHHH
Confidence 6899999999999 9999999876542 22 268899999999997543 22 2356
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCC
Q 010144 165 IFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNK 243 (517)
Q Consensus 165 a~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~ 243 (517)
+.+|+++||+++|++|++||.|++++ ++++..|+.+.+|+.+||+ +++++++++ +|+|++.||.+|.++|++|..+
T Consensus 54 a~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lgl--~~~~~~v~~-aCas~~~al~~A~~~i~~g~~~ 130 (322)
T 1ub7_A 54 AFKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGL--KAFAYDLLA-GCPGWIYALAQAHALVEAGLAQ 130 (322)
T ss_dssp HHHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTTC--CCEEEEEEC-STTHHHHHHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCC--CCEEEeeCc-cchHHHHHHHHHHHHHHcCCCC
Confidence 89999999999999999999999875 4667789999999999999 589999996 9999999999999999999999
Q ss_pred EEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccccceeeccccCCCC
Q 010144 244 LAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHP 323 (517)
Q Consensus 244 ~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~~~~~~~~g~~ 323 (517)
++||+++|.++. +.++.|+.. ..+|||||+|+||++.+... +++.+...+++...+.++.+.++...
T Consensus 131 ~vlv~g~e~~s~-~~~~~d~~~---~~~~GdGA~A~vL~~~~~~~--------~i~~~~~~~~g~~~~~~~~~~~~~~~- 197 (322)
T 1ub7_A 131 KVLAVGAEALSK-IIDWNDRAT---AVLFGDGGGAAVVGKVREGY--------GFRSFVLGADGTGAKELYHACVAPRL- 197 (322)
T ss_dssp EEEEEEEECGGG-TSCTTCHHH---HTTBCCEEEEEEEECCCTTC--------EEEEEEEEECGGGCTTEEEESSCSBC-
T ss_pred EEEEEEechhcc-ccChhhccc---ceeeccccEEEEEEecCCCC--------ceeEEEEEEecCCCCeEEeCCCCCCC-
Confidence 999999999887 344455543 68999999999999865421 24445556677666656554321110
Q ss_pred CcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChH
Q 010144 324 GFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRA 403 (517)
Q Consensus 324 g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~ 403 (517)
+-..+ ..+.+.|++.+++++....+.+.++++| +++|++| +|||+|++||.|.+
T Consensus 198 --p~~~~--------------~~~~~~~~g~~~~~~~~~~~~~~i~~al-------~~agl~~---~did~~~~H~~~~~ 251 (322)
T 1ub7_A 198 --PDGTS--------------MKNRLYMNGREVFKFAVRVMNTATLEAI-------EKAGLTP---EDIRLFVPHQANLR 251 (322)
T ss_dssp --TTSCB--------------CCSSCEECHHHHHHHHHHHHHHHHHHHH-------HHHTCCG---GGCSEEEECCSCHH
T ss_pred --Ccccc--------------ccceEEecCHHHHHHHHHHHHHHHHHHH-------HHcCCCH---HHCCEEEEcCCCHH
Confidence 00000 1122345678899988888999999988 8999996 89999999999999
Q ss_pred HHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEEEechhHHhheeeeEEe
Q 010144 404 VIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVM 475 (517)
Q Consensus 404 il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~VlliafG~G~t~~a~vlr~~ 475 (517)
+++.+.+.||++++++ ..++.++|||++||+++.|.+++++|++++||++++.+||+|++++++++||.
T Consensus 252 ~~d~~~~~lg~~~~~~---~~~~~~~Gh~~~As~~~~l~~~l~~g~~~~g~~~l~~~~G~G~~~~~~vl~~~ 320 (322)
T 1ub7_A 252 IIDAARERLGLPWERV---AVNVDRYGNTSTASIPLALKEAVDAGRIREGDHVLLVSFGAGLTWAAAVLTWG 320 (322)
T ss_dssp HHHHHHHTTTCCGGGB---CCCHHHHCBCGGGHHHHHHHHHHHHTSSCTTCEEEEEEEETTTEEEEEEEECC
T ss_pred HHHHHHHHcCCCHHHH---HHHHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEChhheeEEEEEEeC
Confidence 9999999999999998 46899999999999999999999999999999999999999999999999983
|
| >1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-43 Score=359.94 Aligned_cols=320 Identities=18% Similarity=0.204 Sum_probs=257.5
Q ss_pred CceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhhHH
Q 010144 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMD 162 (517)
Q Consensus 83 ~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~ea~ 162 (517)
++++|.++++|+|+. +++++++.+.++. ++ ++|.+++||++|++..+. ++ ..
T Consensus 11 ~~~~I~g~g~~~P~~---~~~~~~~~~~~~~----~~------~~i~~~~gi~~r~~~~~~-----~~----------~~ 62 (335)
T 1u6e_A 11 RSVGLLSVGAYRPER---VVTNDEICQHIDS----SD------EWIYTRTGIKTRRFAADD-----ES----------AA 62 (335)
T ss_dssp SCEEEEEEEEECCSE---EEEHHHHTTSSSC----CH------HHHHHHHCCSEEEECCTT-----CC----------HH
T ss_pred CceEEEEEEEECCCc---eecHHHHHHHhCC----CH------HHHHHhcCCceEeecCCC-----CC----------HH
Confidence 369999999999999 9999999876542 22 268899999999987542 22 23
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCC
Q 010144 163 EIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYK 241 (517)
Q Consensus 163 ~la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~ 241 (517)
+|+.+|+++||+++|+++++||.||+++ ++++..|+.+.+|+.+||++ +++++++++ +|+|++.||.+|.++|++|.
T Consensus 63 ~la~~A~~~al~~ag~~~~~id~vi~~t~~~~~~~~~~a~~v~~~lgl~-~~~~~~v~~-aC~s~~~al~~A~~~i~~g~ 140 (335)
T 1u6e_A 63 SMATEACRRALSNAGLSAADIDGVIVTTNTHFLQTPPAAPMVAASLGAK-GILGFDLSA-GAAGFGYALGAAADMIRGGG 140 (335)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCSSSCHHHHHHHHHTCT-TSEEEEEEC-GGGHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCC-CCcEeeecc-ccHHHHHHHHHHHHHHHcCC
Confidence 5689999999999999999999999875 46778899999999999997 689999996 99999999999999999999
Q ss_pred CCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccccceeeccccCC
Q 010144 242 NKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQG 321 (517)
Q Consensus 242 ~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~~~~~~~~g 321 (517)
.++|||+++|.++. +.++.|+.. .++|||||+|+||++.+.. + +......+++...+.+..+.+
T Consensus 141 ~~~vLv~g~e~~s~-~~~~~d~~~---~~~~gDGA~A~vl~~~~~~----~-----i~~~~~~~~g~~~~~~~~~~~--- 204 (335)
T 1u6e_A 141 AATMLVVGTEKLSP-TIDMYDRGN---CFIFADGAAAVVVGETPFQ----G-----IGPTVAGSDGEQADAIRQDID--- 204 (335)
T ss_dssp CSSEEEEEEEECGG-GCCTTCTTT---TTTBCEEEEEEEEEECSSC----C-----BCCCEEEECGGGGGGEEESSC---
T ss_pred CCEEEEEEEccccc-ccCcccccc---ceEeccccEEEEEEecCCC----C-----eeEEEEEEcCCcccceeecCC---
Confidence 99999999999987 345556553 7899999999999986531 1 122334455555554443211
Q ss_pred CCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCC
Q 010144 322 HPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGG 401 (517)
Q Consensus 322 ~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~ 401 (517)
....... .. ....++.+++.+++++....+.+.+.+++ +++|+++ +|||+|++||.|
T Consensus 205 ---------~~~~~~~---~~-~~~~~~~~~g~~~~~~~~~~~~~~i~~al-------~~agl~~---~dId~~~~H~~~ 261 (335)
T 1u6e_A 205 ---------WITFAQN---PS-GPRPFVRLEGPAVFRWAAFKMGDVGRRAM-------DAAGVRP---DQIDVFVPHQAN 261 (335)
T ss_dssp ---------HHHHHTS---TT-SCCCCEEECHHHHHHHHHHHHHHHHHHHH-------HHHTCCG---GGCCEEEECCSC
T ss_pred ---------ccCcCCC---cc-CccceEEEcCHHHHHHHHHHHHHHHHHHH-------HHcCCCH---HHCCEEEECCCC
Confidence 0000000 00 00012345567778877778888888888 8999996 899999999999
Q ss_pred hHHHHHHHhhCCCCcc-cchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEEEechhHHhheeeeEE
Q 010144 402 RAVIDGTGKGLELDEY-DLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEV 474 (517)
Q Consensus 402 ~~il~~i~~~Lgl~~e-~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~VlliafG~G~t~~a~vlr~ 474 (517)
..+++.+.+.||++++ ++ ..++.++|||++||+|++|+++.+++++++||++++++||+|++|+++++||
T Consensus 262 ~~~~~~~~~~lg~~~~~~~---~~~~~~~Gnt~sAs~~~~L~~~~~~~~~~~g~~~l~~~~G~G~t~~~~vl~~ 332 (335)
T 1u6e_A 262 SRINELLVKNLQLRPDAVV---ANDIEHTGNTSAASIPLAMAELLTTGAAKPGDLALLIGYGAGLSYAAQVVRM 332 (335)
T ss_dssp HHHHHHHHHHHTCCTTCEE---CCTHHHHCBCGGGHHHHHHHHHHHHTSSCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHHHHHcCCCchhhh---hhhhhhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEehhheeEEEEEEe
Confidence 9999999999999998 66 4678999999999999999999999999999999999999999999999998
|
| >1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-43 Score=370.78 Aligned_cols=310 Identities=16% Similarity=0.183 Sum_probs=252.0
Q ss_pred ceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhhHHH
Q 010144 84 CCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDE 163 (517)
Q Consensus 84 ~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~ea~~ 163 (517)
+++|.++|+|+|+. +++++++.+..+. +++ |+.+++||++|++++++ ++. .+
T Consensus 2 ~v~I~~ig~y~P~~---~v~~~~l~~~~~~----~~~------~i~~~~Gi~~r~~~~~~-----e~~----------~~ 53 (396)
T 1xpm_A 2 AIGIDKINFYVPKY---YVDMAKLAEARQV----DPN------KFLIGIGQTEMAVSPVN-----QDI----------VS 53 (396)
T ss_dssp CEEEEEEEEECCSE---EEEHHHHHHHTTS----CHH------HHHTTTCCSEEEECCTT-----CCH----------HH
T ss_pred ceEEEEEEEeCCCe---EecHHHHHHHhCC----CHH------HHhhhcCceEEEeCCCC-----CCH----------HH
Confidence 58999999999999 9999999987653 232 68899999999997653 333 35
Q ss_pred HHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCC
Q 010144 164 IIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKN 242 (517)
Q Consensus 164 la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~ 242 (517)
|+..|+++||++ ++|++||.||++| ++++..|+.+.+|+.+||++++++++++++ +|+|++.||.+|.++|++|+.
T Consensus 54 la~~Aa~~aL~~--~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~-aC~sg~~Al~~A~~~I~sg~~ 130 (396)
T 1xpm_A 54 MGANAAKDIITD--EDKKKIGMVIVATESAVDAAKAAAVQIHNLLGIQPFARCFEMKE-ACYAATPAIQLAKDYLATRPN 130 (396)
T ss_dssp HHHHHHHTTCCH--HHHHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSCEEEEEES-TTTTHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHhc--CCHHHCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCceEEEecc-ccHHHHHHHHHHHHHHHcCCC
Confidence 589999999988 7899999999875 577789999999999999987799999996 999999999999999999999
Q ss_pred CEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccccce---eecccc
Q 010144 243 KLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECC---MQVEDQ 319 (517)
Q Consensus 243 ~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~---~~~~~~ 319 (517)
++||||++|..+.. .+ .. ...+|||||+|+||++.+. ++....+ ++...+.. +.+.+.
T Consensus 131 ~~vLvvg~e~s~~~-~~---~~---~~~~~GdGA~A~vl~~~~~-----------i~~~~~~-~g~~~~d~~~~~~p~~~ 191 (396)
T 1xpm_A 131 EKVLVIATDTARYG-LN---SG---GEPTQGAGAVAMVIAHNPS-----------ILALNED-AVAYTEDVYDFWRPTGH 191 (396)
T ss_dssp CEEEEEEEEEECCC-TT---CS---SGGGCEEEEEEEEEEESCS-----------SEEECSC-CEEEECCCCSEECBTTC
T ss_pred CEEEEEeehhhccc-cC---CC---CCcccccceEEEEeccCCc-----------eEEEEec-cccccceEEEeeccCCC
Confidence 99999999973331 12 12 2689999999999997532 1222222 22222111 222110
Q ss_pred CCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCC
Q 010144 320 QGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHP 399 (517)
Q Consensus 320 ~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq 399 (517)
+...|++..+++++.+.+.+.+.+++ +++|+++ +|||+|++||
T Consensus 192 ---------------------------~~~~~~G~~~~~~~~~~~~~~~~~~L-------~~agl~~---~did~~~~H~ 234 (396)
T 1xpm_A 192 ---------------------------KYPLVDGALSKDAYIRSFQQSWNEYA-------KRQGKSL---ADFASLCFHV 234 (396)
T ss_dssp ---------------------------SSCEECHHHHHHHHHHHHHHHHHHHH-------HHHTCCG---GGCSEEEECC
T ss_pred ---------------------------CCeEEEcHHHHHHHHHHHHHHHHHHH-------HHcCCCH---HHCCEEEecC
Confidence 01234567778888888889998888 8899996 9999999999
Q ss_pred CChHHHHHHHhhC-----CCCcccc----hhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEEEechhHHhhee
Q 010144 400 GGRAVIDGTGKGL-----ELDEYDL----EPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNC 470 (517)
Q Consensus 400 ~~~~il~~i~~~L-----gl~~e~~----~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~VlliafG~G~t~~a~ 470 (517)
+|.++++.+.+.| +++++++ ++|+..+++||||+|||+|++|++++++|++++||+|+++|||+|++++++
T Consensus 235 ~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~s~~~~~~~GN~~saSi~l~L~~~l~~~~l~~Gd~ill~s~GsG~~~~~~ 314 (396)
T 1xpm_A 235 PFTKMGKKALESIIDNADETTQERLRSGYEDAVDYNRYVGNIYTGSLYLSLISLLENRDLQAGETIGLFSYGSGSVGEFY 314 (396)
T ss_dssp SSHHHHHHHHHTTGGGSCHHHHHHHHHHHHHHTTGGGGTCCCGGGHHHHHHHHHHHHSCCCTTCEEEEEEEETTTEEEEE
T ss_pred CchHHHHHHHHHHHhhcccCCHHHHHHHhhhhhhhhhhcCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEECcchhheEE
Confidence 9999999999999 8887765 566677799999999999999999999999999999999999999999999
Q ss_pred eeEEeccCCC
Q 010144 471 VWEVMKDLED 480 (517)
Q Consensus 471 vlr~~~~~~~ 480 (517)
++++...++.
T Consensus 315 ~~~v~~~~~~ 324 (396)
T 1xpm_A 315 SATLVEGYKD 324 (396)
T ss_dssp EEEECTTGGG
T ss_pred EEEEcccHHH
Confidence 9999876653
|
| >2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-44 Score=383.13 Aligned_cols=334 Identities=14% Similarity=0.161 Sum_probs=250.0
Q ss_pred HHHHHHhHhhhhcCCCceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCC
Q 010144 68 YIIFHLYKWVLQKRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEG 147 (517)
Q Consensus 68 ~~~~~~~~~~~~~~~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~ 147 (517)
-+.|++ .|+++|+|.++++|+|+. +|+++++.+..+.. ++ ++..++|+.+|++..+.
T Consensus 14 ~~~~~~------~~~~~vgI~aig~y~P~~---~v~~~el~~~~g~~----~~------~~~~~~Gi~~r~~~~~~---- 70 (478)
T 2p8u_A 14 GTENLY------FQSMDVGIVALEIYFPSQ---YVDQAELEKYDGVD----AG------KYTIGLGQAKMGFCTDR---- 70 (478)
T ss_dssp ---CHH------HHHHCCEEEEEEEECCSE---EEEHHHHHHHHTCC----TT------CCCCCCCCCEEECCCTT----
T ss_pred cceehh------cCCCceEEEEEEEECCCe---EecHHHHHHHhCCC----hh------HhecccCceEEEeCCCC----
Confidence 355666 667899999999999999 99999999887642 32 56778999999886542
Q ss_pred CCCCccHHHhHhhHHHHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHc---CCCCCeeEEEecCCcc
Q 010144 148 REESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRY---NLRNDIKAFNLSGMGC 223 (517)
Q Consensus 148 ~~~~~~m~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~L---Gl~~~~~~~dl~~mgC 223 (517)
++. .+|+++|+++||+++|++|+|||+||++| ++++..|+++++|++.| |++ ++.++|+++ +|
T Consensus 71 -e~~----------~~La~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~v~~~L~~lG~~-~~~~~dv~~-aC 137 (478)
T 2p8u_A 71 -EDI----------NSLCMTVVQNLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNT-DIEGIDTTN-AC 137 (478)
T ss_dssp -CCH----------HHHHHHHHHHHHHHTTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTTTTTCC-CCBCCEEES-GG
T ss_pred -CCH----------HHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCcccCccHHHHHHHHHhhcCCC-CceEEEEcc-hh
Confidence 333 35589999999999999999999999985 67778999999999554 454 799999986 99
Q ss_pred hHHHHHHHHHHHHHHcCC--CCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccc-eee
Q 010144 224 SASVVAVDLVQQLFRTYK--NKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNC-LVR 300 (517)
Q Consensus 224 sggl~AL~lA~~lL~ag~--~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~-i~~ 300 (517)
+||+.||++|.+++++++ .++||||++|... | .+++. ..+|||||+|+||++++.. .+.. +..
T Consensus 138 ~gg~~AL~~A~~~i~sg~~~~~~aLVV~~Eia~--~---~~~~~---~~~fGdGA~A~Ll~~~~~~------~l~~~~~g 203 (478)
T 2p8u_A 138 YGGTAAVFNAVNWIESSSWDGRYALVVAGDIAV--Y---ATGNA---RPTGGVGAVALLIGPNAPL------IFERGLRG 203 (478)
T ss_dssp GHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEEC--C---CSSTT---GGGCEEEEEEEEEESSCSE------EECTTCCE
T ss_pred HHHHHHHHHHHHHHHcCCccCCEEEEEEeeeec--c---cCCCC---CCcccceeEEEEEecCCCc------eEeeccce
Confidence 999999999999999999 8999999999642 3 33332 6799999999999976431 0111 011
Q ss_pred eeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHH---HHHHHHHHHHHHHHhhcCCCc
Q 010144 301 THFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQ---FRYVIQSYYENRIRKSTSSTK 377 (517)
Q Consensus 301 t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~---~~~~~~~v~~~v~~~l~~~~~ 377 (517)
++. .....++.|.++.. + | .|++... |.+++..+.+.+.+.+
T Consensus 204 s~~----~~~~d~~~p~~~~~---~------~-----------------~~dG~~s~~~y~~a~~~~~~~~~~~l----- 248 (478)
T 2p8u_A 204 THM----QHAYDFYKPDMLSE---Y------P-----------------IVDGKLSIQCYLSALDRCYSVYCKKI----- 248 (478)
T ss_dssp EEE----CCCCSEECCCTTCS---S------C-----------------EECHHHHHHHHHHHHHHHHHHHHHHH-----
T ss_pred ecc----cchhheeeecCCCc---c------e-----------------EEcCcchHHHHHHHHHHHHHHHHHHH-----
Confidence 111 11223444432111 0 0 1111222 2233344444444443
Q ss_pred hhh--------hhCCCCCcccccceeecCCCChHHHHHHHhhCC------------------------CCc---------
Q 010144 378 PEA--------VLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLE------------------------LDE--------- 416 (517)
Q Consensus 378 ~~~--------~~g~~~d~~~did~~~~Hq~~~~il~~i~~~Lg------------------------l~~--------- 416 (517)
+ ++|+.+ +|||+||+||+|.++++.+.+.|+ ++.
T Consensus 249 --~~~~~~~~~~~g~~~---~did~~v~H~~~~ki~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 323 (478)
T 2p8u_A 249 --HAQWQKEGNDKDFTL---NDFGFMIFHSPYCKLVQKSLARMLLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDRDV 323 (478)
T ss_dssp --HHHHHHHTCCCCCCG---GGCSEEEECCSSHHHHHHHHHHHHHHHHHHCTTGGGSGGGTTCGGGTTCCGGGCTTCHHH
T ss_pred --hhhccccccccCCCh---HHcCEEEecCCcHHHHHHHHHHhCcccccccccccccccccccchhccCChhhcccchhH
Confidence 2 457775 899999999999999999999998 676
Q ss_pred c-------------cchhhhhcccCcccchhhHHHHHHHHHHHcCC--CCCCCEEEEEEechhHHhheeeeEEeccCCCC
Q 010144 417 Y-------------DLEPARMALHRFGNTSAGGLWYVLGYMEAKKR--LKKGDRILMISLGAGFKCNNCVWEVMKDLEDP 481 (517)
Q Consensus 417 e-------------~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~--i~~Gd~VlliafG~G~t~~a~vlr~~~~~~~~ 481 (517)
| ++++++.+++++|||+|||+|+.|++++++++ +++||+|+++|||+|++|++++++|.....|.
T Consensus 324 ek~~~~~~~~~~~~k~~~~~~~~~~~GN~~saSi~l~L~~ll~~~~~~~~~Gdrill~s~GsG~~~~~~~l~~~~~~~~~ 403 (478)
T 2p8u_A 324 EKAFMKASSELFSQKTKASLLVSNQNGNMYTSSVYGSLASVLAQYSPQQLAGKRIGVFSYGSGLAATLYSLKVTQDATPG 403 (478)
T ss_dssp HHHHHHHTHHHHHHHTTGGGHHHHHHCCCGGGHHHHHHHHHHHHSCHHHHTTCEEEEEEEETTTEEEEEEEEECSCCCTT
T ss_pred HHHHHHHhHHHHHHhHHHHHHHHHhcCchHHHHHHHHHHHHHHhCCccCCCCCEEEEEEEcchhhhEEEEEEEeCCCCcc
Confidence 6 77788899999999999999999999999987 88999999999999999999999998775444
Q ss_pred CchhhhcccC
Q 010144 482 NVWKDCIDRY 491 (517)
Q Consensus 482 ~~w~~~~~~~ 491 (517)
.+|.+-++.-
T Consensus 404 ~~~~~~~~~~ 413 (478)
T 2p8u_A 404 SALDKITASL 413 (478)
T ss_dssp SHHHHHHHTT
T ss_pred hhHHHHHHHH
Confidence 4555544443
|
| >2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-43 Score=372.80 Aligned_cols=311 Identities=13% Similarity=0.176 Sum_probs=241.6
Q ss_pred CCceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhhH
Q 010144 82 GQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEM 161 (517)
Q Consensus 82 ~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~ea 161 (517)
|++|+|.++++|+|+. +++++++.+..+.. ++ |+...+|+.++++.++. ++.
T Consensus 1 ~~~v~I~~ig~y~P~~---~v~~~~l~~~~g~~----~~------~~~~g~G~~~~~~~~~~-----e~~---------- 52 (450)
T 2f82_A 1 AKNVGILAMDIYFPPT---CVQQEALEAHDGAS----KG------KYTIGLGQDCLAFCTEL-----EDV---------- 52 (450)
T ss_dssp CCSCEEEEEEEECCSE---EEEHHHHHHHTTCC----TT------TTTTTSCCCEEECCCTT-----CCH----------
T ss_pred CCceEEEEEEEECCCe---eccHHHHHHHhCCC----HH------HhhhhhCceeeeeCCCC-----CCH----------
Confidence 5789999999999999 99999999886542 32 45455666666654432 333
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCC--CCCeeEEEecCCcchHHHHHHHHHHHHHH
Q 010144 162 DEIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNL--RNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (517)
Q Consensus 162 ~~la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl--~~~~~~~dl~~mgCsggl~AL~lA~~lL~ 238 (517)
.+|+.+|+++||+++|++|++||+||++| ++++..|+.+.+|+++||+ ++++.++++++ +|+|++.||.+|.++|+
T Consensus 53 ~~La~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~v~~~lgl~g~~~~~~~~v~~-aC~gg~~AL~~A~~~I~ 131 (450)
T 2f82_A 53 ISMSFNAVTSLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVEGVDSTN-ACYGGTAALLNCVNWVE 131 (450)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEEEEEECCCCSCSSSCHHHHHTHHHHTTTCCCCBCCEECS-GGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCcCHHHCCEEEEEecCCCCCCCcHHHHHHHHhCCcCCCCceEEEhhh-hhHHHHHHHHHHHHHHH
Confidence 45589999999999999999999999874 6778899999999999999 45799999996 99999999999999999
Q ss_pred cCCC--CEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccccc---e
Q 010144 239 TYKN--KLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYEC---C 313 (517)
Q Consensus 239 ag~~--~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~---~ 313 (517)
+|+. ++||||++|.++. .+++ ...+|||||+|+||++.+.. .+ ..++++...+. .
T Consensus 132 sg~~~~~~vLVvg~e~~~~-----~~~~---~~~~fGDGA~A~ll~~~~~~----~~--------~~~~~g~~~~~~~d~ 191 (450)
T 2f82_A 132 SNSWDGRYGLVICTDSAVY-----AEGP---ARPTGGAAAIAMLIGPDAPI----VF--------ESKLRGSHMAHVYDF 191 (450)
T ss_dssp STTCCSCEEEEEEEEEECC-----SSST---TGGGCEEEEEEEEEESSCSE----EE--------EEEEEEEEECCCCSE
T ss_pred cCCCcCCeEEEEEeeeccc-----cCCC---CCcccccceEEEEeccCCce----EE--------Eeccceeehhhccce
Confidence 9986 9999999999763 2333 26899999999999876431 01 11112211111 2
Q ss_pred eeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhh------hhCCCCC
Q 010144 314 MQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEA------VLGAGLN 387 (517)
Q Consensus 314 ~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~------~~g~~~d 387 (517)
+.+..+. .+ ..+++...+++....+.+.+.+++ + ++|+.+
T Consensus 192 ~~p~~~~---~~-----------------------~~~~G~~~~~~~~~~l~~~~~~~l-------~~~~~~~~agl~~- 237 (450)
T 2f82_A 192 YKPNLAS---EY-----------------------PVVDGKLSQTCYLMALDSCYKHLC-------NKFEKLEGKEFSI- 237 (450)
T ss_dssp ECCCTTC---SC-----------------------CEECHHHHHHHHHHHHHHHHHHHH-------HHHHHHHSSCCCG-
T ss_pred eeeCCCC---Cc-----------------------eeecCccHHHHHHHHHHHHHHHHH-------HHhhhccccCCCh-
Confidence 2221110 00 112334445555555566665554 3 677885
Q ss_pred cccccceeecCCCChHHHHHHHhhCC------------------CCc----------------------------ccchh
Q 010144 388 LKAGIEHFCLHPGGRAVIDGTGKGLE------------------LDE----------------------------YDLEP 421 (517)
Q Consensus 388 ~~~did~~~~Hq~~~~il~~i~~~Lg------------------l~~----------------------------e~~~~ 421 (517)
+|||+|++||+|.++++.+.+.|+ +++ +++.|
T Consensus 238 --~did~~v~Hq~~~~i~~~~~~~L~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ek~~~~~~~~~~~~k~~~ 315 (450)
T 2f82_A 238 --NDADYFVFHSPYNKLVQKSFARLLYNDFLRNASSIDEAAKEKFTPYSSLSLDESYQSRDLEKVSQQLAKTYYDAKVQP 315 (450)
T ss_dssp --GGCSEEEECCSSHHHHHHHHHHHHHHHHHTTCTTCCHHHHHHHGGGTTCCHHHHHTCHHHHHHHHHHHHHHHHHHTGG
T ss_pred --hhcCEEEecCChHHHHHHHHHHhcccccccccccccccccccccccccccccccccchhHHHHHhhhhHHHHHHhhhH
Confidence 899999999999999999999998 454 67778
Q ss_pred hhhcccCcccchhhHHHHHHHHHHHcCC-CCCCCEEEEEEechhHHhheeeeEEecc
Q 010144 422 ARMALHRFGNTSAGGLWYVLGYMEAKKR-LKKGDRILMISLGAGFKCNNCVWEVMKD 477 (517)
Q Consensus 422 S~~~l~~~GNtsSASi~~~L~~~~~~g~-i~~Gd~VlliafG~G~t~~a~vlr~~~~ 477 (517)
|+.++++||||+|||+|+.|++++++++ +++||+|+++|||+|++|++++++|...
T Consensus 316 s~~~~~~~GN~~saSi~l~L~~~l~~~~~~~~Gd~ill~s~GsG~~~~~~~l~~~~~ 372 (450)
T 2f82_A 316 TTLVPKQVGNMYTASLYAAFASLVHNKHSDLAGKRVVMFSYGSGSTATMFSLRLCEN 372 (450)
T ss_dssp GCHHHHHHCCCGGGHHHHHHHHHHHHHGGGCTTCEEEEEEEETTTEEEEEEEEECCC
T ss_pred HHHHHHhcCchHHHHHHHHHHHHHHhCccCCCCCEEEEEeecCCcccEEEEEEEeCC
Confidence 8888999999999999999999999885 8899999999999999999999999876
|
| >2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-43 Score=377.78 Aligned_cols=329 Identities=15% Similarity=0.159 Sum_probs=248.7
Q ss_pred CCCceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhh
Q 010144 81 RGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSE 160 (517)
Q Consensus 81 ~~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~e 160 (517)
-|++|+|.++|.|+|+. +|+++++.+..+.+ ++ ||.+++||++|++++++ |++.+|
T Consensus 2 m~~~VgI~~~g~y~P~~---~v~~~~l~~~~~~~----~~------~i~~~~Gi~~r~~~~~~-----E~~~~m------ 57 (460)
T 2wya_A 2 MPKDVGILALEVYFPAQ---YVDQTDLEKYNNVE----AG------KYTVGLGQTRMGFCSVQ-----EDINSL------ 57 (460)
T ss_dssp CCSSCEEEEEEEECCSE---EEEHHHHHHHTTCC----TT------CCCCCCCCCEEECCCTT-----CCHHHH------
T ss_pred CCCceEEEEEEEECCCe---EEcHHHHHHHhCCC----HH------HHHHhhCcEEEEECCCC-----CCHHHH------
Confidence 47899999999999999 99999999887653 33 67788999999998764 655556
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCC--CCeeEEEecCCcchHHHHHHHHHHHHH
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLR--NDIKAFNLSGMGCSASVVAVDLVQQLF 237 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl~--~~~~~~dl~~mgCsggl~AL~lA~~lL 237 (517)
+++|+++||+++|++|+|||+||++| |+++..|+++++|++.||+. .++.+||+++ +|+||+.||++|.+++
T Consensus 58 ----a~~Aa~~al~~a~i~~~~Id~ii~aT~t~~~~~ps~a~~v~~~l~~~g~~~~~a~D~~~-aC~g~~~al~~A~~~i 132 (460)
T 2wya_A 58 ----CLTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTN-ACYGGTASLFNAANWM 132 (460)
T ss_dssp ----HHHHHHHHHHHHTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTGGGTCCCCBCCEEES-GGGHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCchHHHHHHHHhccCCCCeeEechhh-hhhhHHHHHHHHHHHH
Confidence 79999999999999999999999985 78899999999999999753 4689999997 9999999999999999
Q ss_pred HcCCCCE--EEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccccceee
Q 010144 238 RTYKNKL--AIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQ 315 (517)
Q Consensus 238 ~ag~~~~--aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~~~ 315 (517)
++|+.++ +++++++... | .|++. ..+|||||+|++++..+... +. .+....+. ......+.
T Consensus 133 ~~g~~~~~lvvv~~s~~~~--~---~d~~~---~~~~GdGA~A~l~~~~~~~~----~~-~~~~~~~~----~~~~df~~ 195 (460)
T 2wya_A 133 ESSSWDGRYAMVVCGDIAV--Y---PSGNA---RPTGGAGAVAMLIGPKAPLA----LE-RGLRGTHM----ENVYDFYK 195 (460)
T ss_dssp TSTTCCSCEEEEEEEEEEC--C---CSSTT---GGGCEEEEEEEEEESSCSEE----EC-TTCCEEEE----CCCCSEEC
T ss_pred HhccccceEEEEEeccccc--c---ccccc---cccCcchHHhhhcccCCcce----ee-cccccccc----cchhhhhc
Confidence 9998654 4444544332 3 34443 56899999999999876531 11 01111111 11112333
Q ss_pred ccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCccccccee
Q 010144 316 VEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHF 395 (517)
Q Consensus 316 ~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~ 395 (517)
+..+..... .+... ... ...|.+.++|+++.+.+++.+.+.+ +..++++ +|+|++
T Consensus 196 p~~~s~~~~--~dg~~-------s~~------~~~~~g~~v~~~~~~~~~~~~~~~l-------~~~~~~~---~d~d~~ 250 (460)
T 2wya_A 196 PNLASEYPI--VDGKL-------SIQ------CYLRALDRCYTSYRKKIQNQWKQAG-------SDRPFTL---DDLQYM 250 (460)
T ss_dssp CCTTCSCCE--ECHHH-------HHH------HHHHHHHHHHHHHHHHHHHHHHHTT-------CCCCCCG---GGCSEE
T ss_pred cCCCCCCcc--cCCcc-------chH------HHHHhhHHHHHHHHHHHHHHHHHHH-------HHcCCCH---HHHhhh
Confidence 321111100 11110 000 1123457899999999999998887 7888885 999999
Q ss_pred ecCCCChHHHHHHHhhCCCC----------------------------------------------cccchhhhhcccCc
Q 010144 396 CLHPGGRAVIDGTGKGLELD----------------------------------------------EYDLEPARMALHRF 429 (517)
Q Consensus 396 ~~Hq~~~~il~~i~~~Lgl~----------------------------------------------~e~~~~S~~~l~~~ 429 (517)
++||++.++++...++|+++ .+++++++.+++++
T Consensus 251 v~Hqp~~r~~~k~~~rL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~~~~~~~ 330 (460)
T 2wya_A 251 IFHTPFCKMVQKSLARLMFNDFLSASSDTQTSLYKGLEAFGGLKLEDTYTNKDLDKALLKASQDMFDKKTKASLYLSTHN 330 (460)
T ss_dssp EECCSSHHHHHHHHHHHHHHHHHHSCHHHHHHHCGGGGGGTTCCGGGGGTCHHHHHHHHHHHHHHHHHHTGGGGHHHHHH
T ss_pred hhcccchHHHHHHHHHhcchhhhhcccchhhhhhhhhhhhcCCchhhhhhhhHHHHHHHHHHHHHhhcchhhhhhHHHhh
Confidence 99999999988877776532 12456678899999
Q ss_pred ccchhhHHHHHHHHHHHc--CCCCCCCEEEEEEechhHHhheeeeEEeccCCC
Q 010144 430 GNTSAGGLWYVLGYMEAK--KRLKKGDRILMISLGAGFKCNNCVWEVMKDLED 480 (517)
Q Consensus 430 GNtsSASi~~~L~~~~~~--g~i~~Gd~VlliafG~G~t~~a~vlr~~~~~~~ 480 (517)
|||+|||+|+.|++++++ +++++||+|+++|||+|+++....+++..+..+
T Consensus 331 GNt~sASiplaL~~ll~~~~~~~~~GdrIll~~fGSGl~s~~fs~~v~~~~~~ 383 (460)
T 2wya_A 331 GNMYTSSLYGCLASLLSHHSAQELAGSRIGAFSYGSGLAASFFSFRVSQDAAP 383 (460)
T ss_dssp CCCGGGHHHHHHHHHHHHSCHHHHTTCEEEEEEEETTTEEEEEEEEECSCCST
T ss_pred CCcchhhHHHHHHHHHHhccccCCCCCEEEEEEecCCccceEEEEEEeCCccc
Confidence 999999999999999864 466799999999999999999999998776554
|
| >3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-22 Score=208.41 Aligned_cols=241 Identities=12% Similarity=0.127 Sum_probs=159.9
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHH
Q 010144 159 SEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (517)
Q Consensus 159 ~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ 238 (517)
+...+|+.+|+++||+++|++|+|||+||+++.... +..++.++++|| +++||+++ +|+|++.||.+|..+++
T Consensus 53 ~a~sdLa~~Aa~~AL~~AGi~~~DID~II~gt~t~q--~~~A~~va~~Lg----ipafdV~~-ACsg~~~AL~~Aa~~I~ 125 (347)
T 3lma_A 53 MAERKLMEDAVQSALSKQNLKKEDIDIFLAGDLLNQ--NVTANYVARHLK----IPFLCLFG-ACSTSMESIAISSALID 125 (347)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCGGGCSEEEEEESSSS--STTHHHHHHHHC----CCEEEBCC-STTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCc--hhHHHHHHHHhC----CCEEEecC-hhHHHHHHHHHHHHHHh
Confidence 445678999999999999999999999999864333 337899999995 46999997 99999999999999999
Q ss_pred cCCCCEEEEEEecCCCCC---CCCCCCc--cccccccccccceEEEEEeecccccccchhhccceeeeeeccCcccccce
Q 010144 239 TYKNKLAIVVSTESMGPN---WYCGREK--SMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECC 313 (517)
Q Consensus 239 ag~~~~aLVVs~E~~s~~---~~~~~dr--~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~ 313 (517)
+|..++||||++|.+|.. +..+.+. .......+++|||+|+||++.+.. .+ +. .. +-++..+
T Consensus 126 sG~~~~VLVVGaE~~S~aerq~r~p~e~g~q~p~ta~~t~dGAGA~VL~~~g~~-----p~---I~-~~--t~Gkvvd-- 192 (347)
T 3lma_A 126 GGFAKRALAATSSHNATAERQFRYPTEYGGQKPGTATSTVTGSGAVVLSQQPGG-----IK---IT-SA--TVGRVID-- 192 (347)
T ss_dssp TTSCSEEEEEEEECGGGTTCCC----------------CCCEEEEEEEESSCCS-----EE---EE-EE--ECCCCBC--
T ss_pred cCCCCEEEEEEeccccchhhhccCcchhcccCCchhcEEccceeEEEEEecCCC-----Cc---ee-ee--eeeeeec--
Confidence 999999999999998861 1111110 011236788999999999965432 11 11 11 1122211
Q ss_pred eeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccc
Q 010144 314 MQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIE 393 (517)
Q Consensus 314 ~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did 393 (517)
.|.. |...+.. .. +....+++.+.+ ++.|++| +|+|
T Consensus 193 ---------~g~~---d~~nmg~------------------am----aPaA~~ti~~~l-------~d~g~~~---~d~D 228 (347)
T 3lma_A 193 ---------LGIT---DSQDMGS------------------AM----APAAADTIKQHL-------EDLGRTP---DDYD 228 (347)
T ss_dssp ---------CSCC---CTTCHHH------------------HH----HHHHHHHHHHHH-------HHHTCCG---GGCS
T ss_pred ---------cCCC---CCCCccc------------------cc----hHHHHHHHHHHH-------HHhCCCH---HHcC
Confidence 0110 0000000 00 011224455555 7889996 9999
Q ss_pred eee---cCCCChHHHHHHHhhCCCCcccchhhhhcccCcccchh--------hHHHHHHH-HHHH---cCCCCCCCEEEE
Q 010144 394 HFC---LHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSA--------GGLWYVLG-YMEA---KKRLKKGDRILM 458 (517)
Q Consensus 394 ~~~---~Hq~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsS--------ASi~~~L~-~~~~---~g~i~~Gd~Vll 458 (517)
+++ +||.|.++++++.+++|++.++... -..+.-|+|... +....+|. ++++ +|+ ..||++
T Consensus 229 ~ivtgdL~q~g~~il~~l~~~~g~~~~~~~~-dcg~~iy~~~~~~~~ggsg~~csa~v~~~~~~~~~~~g~---~~ril~ 304 (347)
T 3lma_A 229 LILTGDLSGVGSPILKDLLKEEGINVGTKHN-DCGLMIYTPDQQVFAGGSGCACSAVVTFAHIFKEIEAGR---LNRVLV 304 (347)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTTCCCGGGEE-EGGGTSSCC---------CCCCHHHHHHHTHHHHHHTTS---CSEEEE
T ss_pred EEecCChHHHHHHHHHHHHHHcCCChhHCcc-ccceEEecCCCcccCCCCccccHHHHHHHHHHHHHhcCc---ccEEEE
Confidence 999 8899999999999999999988731 115677776654 44444443 3333 343 369999
Q ss_pred EEechhHHh
Q 010144 459 ISLGAGFKC 467 (517)
Q Consensus 459 iafG~G~t~ 467 (517)
+++|++++-
T Consensus 305 ~~tGalls~ 313 (347)
T 3lma_A 305 VATGALLSP 313 (347)
T ss_dssp EEEEECCCH
T ss_pred EecccccCc
Confidence 999998764
|
| >3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A | Back alignment and structure |
|---|
Probab=99.80 E-value=2.1e-18 Score=183.13 Aligned_cols=313 Identities=10% Similarity=0.025 Sum_probs=201.1
Q ss_pred cCCCceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccC---------CCcCCCCC
Q 010144 80 KRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPR---------NVVEGREE 150 (517)
Q Consensus 80 ~~~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~---------~~~~~~~~ 150 (517)
...++|.|+|+|+..|.. .+.+++.+.+..- ++||..-..... .+...++.
T Consensus 15 ~~~~~v~I~G~g~~~p~g----~~~~~~w~~l~~g----------------~~~i~~~~~~~~~~~~~~~~~~v~~fd~~ 74 (427)
T 3ho9_A 15 VSKRRVVVTGLGMLSPVG----NTVESTWKALLAG----------------QSGISLIDHFDTSAYATKFAGLVKDFNCE 74 (427)
T ss_dssp --CCCEEEEEEEEEBTTB----SSHHHHHHHHHTT----------------CCCEEECCSSCCTTCSCCEEECCSSCCCT
T ss_pred CCCCCEEEEeeeEECCCC----CCHHHHHHHHHcC----------------CCceeeCCccccccCccceeeEcCCCChh
Confidence 466789999999999998 6888888776431 122222100000 00000110
Q ss_pred C---ccHHHhHhhHHHHHHHHHHHHHHhCCCCCCCcC----EEEEeecC---------------------------CCCC
Q 010144 151 S---PSLAEAFSEMDEIIFDTLDKLFARTDISPSEID----VLVVNVSL---------------------------FSPA 196 (517)
Q Consensus 151 ~---~~m~~~~~ea~~la~~Aa~~aL~~agi~p~dID----~LI~a~s~---------------------------~~~~ 196 (517)
. +.-.+.......|+.+|+++||+++|+++++|| .++++++. ....
T Consensus 75 ~~i~~~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (427)
T 3ho9_A 75 DIISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIV 154 (427)
T ss_dssp TTSCHHHHTTSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHST
T ss_pred hcCCHHHHhhCCHHHHHHHHHHHHHHHHCCCCcccccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccc
Confidence 0 111112234578999999999999999999998 57766431 1224
Q ss_pred CcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCCC-------------------
Q 010144 197 PSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNW------------------- 257 (517)
Q Consensus 197 Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~~------------------- 257 (517)
+..+.+|+..||+++ +++++.. +|++++.||..|.++|++|..+.|||+++|.++..+
T Consensus 155 ~~~a~~is~~lgl~G--p~~~v~t-aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~~~~ 231 (427)
T 3ho9_A 155 NMVAGHLTIMYGLRG--PSISIAT-AATSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQ 231 (427)
T ss_dssp THHHHHHHHHHTCCS--CEECCCC-GGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHH
T ss_pred hHHHHHHHHHhCCCC--Ceecccc-hhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhccCcccCCCCCC
Confidence 467899999999974 7999997 999999999999999999999999999999986310
Q ss_pred ---CCCCCccccccccccccceEEEEEeecccccccchhhc-cceeeeeeccCcccccceeeccccCCCCCcccchhHHH
Q 010144 258 ---YCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKL-NCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTK 333 (517)
Q Consensus 258 ---~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l-~~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~ 333 (517)
.+..++. ..+++||||+|+||++.+.... .+-++ ..+..+...+|+.. +..+. +.
T Consensus 232 ~~~~pfd~~~---~G~v~geGAaavvL~~~~~A~~-~g~~i~a~i~g~~~~~dg~~---~~~p~--------------~~ 290 (427)
T 3ho9_A 232 AASRPWDKER---DGFVLGDGAGMLVLEEYEHAKK-RGAKIYAELVGFGMSSDAYH---MTSPP--------------EN 290 (427)
T ss_dssp HHCCTTBTTC---CSBCBBCEEEEEEEEEHHHHHH-TTCCCCEEEEEEEEEECCSB---TTBCC--------------TT
T ss_pred cccCCccCCC---CCceeeeeEEEEEEccHHHHHH-CCCcEEEEEEEEeecCCCCC---cCCCC--------------CC
Confidence 0011111 2678999999999998543211 01111 11233333344321 11000 00
Q ss_pred HHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecC-----CCChHHHHHH
Q 010144 334 AAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLH-----PGGRAVIDGT 408 (517)
Q Consensus 334 ~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~H-----q~~~~il~~i 408 (517)
+ . ...+.+++++ +++|++| +|||++.+| ++.......+
T Consensus 291 --~-----------------~--------~~~~ai~~al-------~~Agl~~---~dId~ve~HgtgT~~~d~~e~~a~ 333 (427)
T 3ho9_A 291 --G-----------------A--------GAALAMANAL-------RDAGIEA---SQIGYVNAHGTSTPAGDKAEAQAV 333 (427)
T ss_dssp --C-----------------H--------HHHHHHHHHH-------HHHTCCG---GGCCEEECCCCSCHHHHHHHHHHH
T ss_pred --H-----------------H--------HHHHHHHHHH-------HHcCCCH---HHccEEEecCCcCCCcCHHHHHHH
Confidence 0 0 0123344555 6889996 999999999 6666677888
Q ss_pred HhhCCCCcccchhhhhcccCcccchhhHHHHHHHH---HHHcCCC-------------------------CCCCEEEEEE
Q 010144 409 GKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGY---MEAKKRL-------------------------KKGDRILMIS 460 (517)
Q Consensus 409 ~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~---~~~~g~i-------------------------~~Gd~Vllia 460 (517)
.+.+|.+.+++.. ......+||+.+|+=...+.. .++.+.+ .+.++++.-+
T Consensus 334 ~~~~g~~~~~~~v-~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s 412 (427)
T 3ho9_A 334 KTIFGEAASRVLV-SSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNS 412 (427)
T ss_dssp HHHHGGGGGTSEE-ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCCBCCBSSCEECSSCCEEEEEE
T ss_pred HHHhcccCCCeEE-ecchHhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccccccccccCCCCCEEEEeC
Confidence 8888887766632 234566899999885555543 3333311 1457888999
Q ss_pred echhHHhheeeeEE
Q 010144 461 LGAGFKCNNCVWEV 474 (517)
Q Consensus 461 fG~G~t~~a~vlr~ 474 (517)
||.|-+.++++++.
T Consensus 413 fGfgG~na~~vl~~ 426 (427)
T 3ho9_A 413 FGFGGTNGSLIFKK 426 (427)
T ss_dssp EETTTEEEEEEEEC
T ss_pred ccCCceeEEEEEEe
Confidence 99999888888863
|
| >3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-17 Score=176.74 Aligned_cols=311 Identities=9% Similarity=0.016 Sum_probs=193.1
Q ss_pred CCceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccC---------CCcCCCCC--
Q 010144 82 GQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPR---------NVVEGREE-- 150 (517)
Q Consensus 82 ~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~---------~~~~~~~~-- 150 (517)
.++|.|+|+|++.|.. .+.+++.+.+..- ++|+.+...... .+...++.
T Consensus 3 ~~~v~ItG~g~~~P~g----~~~~~~w~~l~~g----------------~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~ 62 (413)
T 3o04_A 3 KRRVVVTGIGAVTPIG----NDAETSWENAKKG----------------VNGVAKMTRLNPDDFPVKIAAELKDFDVEKY 62 (413)
T ss_dssp CCCEEEEEEEEEBTTB----SSHHHHHHHHHTT----------------CCCEEECCSSCGGGSSCCEEECCSSCCGGGT
T ss_pred CCCEEEEEeEEECCCC----CCHHHHHHHHHcC----------------CCceeeCCccccccCccccccccCCCChhhc
Confidence 3579999999999998 7889988765321 223322111000 00000000
Q ss_pred -CccHHHhHhhHHHHHHHHHHHHHHhCCCCCCCcC----EEEEeec------------------CCCCCCc---------
Q 010144 151 -SPSLAEAFSEMDEIIFDTLDKLFARTDISPSEID----VLVVNVS------------------LFSPAPS--------- 198 (517)
Q Consensus 151 -~~~m~~~~~ea~~la~~Aa~~aL~~agi~p~dID----~LI~a~s------------------~~~~~Ps--------- 198 (517)
.+.-++.......|+.+|+++||+++|+++++|| .|+++++ ++...|.
T Consensus 63 i~~~~~~~~d~~~~l~l~Aa~~AL~dAGl~~~~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 142 (413)
T 3o04_A 63 LEKKEARKMDRFTHYAIASAEMAVQDSGLVIDDSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDM 142 (413)
T ss_dssp SCHHHHTTSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTH
T ss_pred cCHHHHhhCCHHHHHHHHHHHHHHHHcCCChhHcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccH
Confidence 0011111234577999999999999999999999 8888764 2222332
Q ss_pred HHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCC---------------CCC------C
Q 010144 199 LTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESM---------------GPN------W 257 (517)
Q Consensus 199 ~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~---------------s~~------~ 257 (517)
.+.+|+..||+++ ++++++. +|+|++.||..|.++|++|..+.|||+++|.+ +.. .
T Consensus 143 ~a~~ia~~lgl~g--p~~~v~~-aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~~~~~~~~~~~~~ls~~~~p~~~~ 219 (413)
T 3o04_A 143 GSGQVSIRFGAKG--INSTTVT-ACATATNSIGDAFKVIERGDADAMITGGAEAPITKMSLAGFTANKALSLNPDPETAC 219 (413)
T ss_dssp HHHHHHHHHTCCS--CEECCCC-GGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCCTTTSC
T ss_pred HHHHHHHHhCCCC--cceeecc-hhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCCHHHHHHHHhcccccCCCCCCCCc
Confidence 3889999999974 8999997 99999999999999999999999999999983 210 0
Q ss_pred CCCCCccccccccccccceEEEEEeecccccccchhhc-cceeeeeeccCcccccceeeccccCCCCCcccchhHHHHHH
Q 010144 258 YCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKL-NCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAA 336 (517)
Q Consensus 258 ~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l-~~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~ 336 (517)
.+..++. ..+++||||+|+||++.+.... .+-++ ..+..+...+|+.. +..+ . |. +
T Consensus 220 ~pfd~~~---~g~~~gdGAaavvL~~~~~A~~-~g~~i~a~i~g~~~~~dg~~---~~~~-----------~---~~--~ 276 (413)
T 3o04_A 220 RPFDKDR---DGFIIGEGAGIVILEEYEHAKA-RGAKIYAEIVGYGATGDAYH---ITAP-----------A---PN--G 276 (413)
T ss_dssp CTTBTTC---CSBCBBCEEEEEEEEEHHHHHH-HTCCCCEEEEEEEEEECCSC---SSSC-----------C---GG--G
T ss_pred CCCcCCC---CCceEeccEEEEEEeeHHHHHh-CCCeEEEEEEEEEEcCCCCC---CCCC-----------C---CC--H
Confidence 0011111 2678999999999997543211 01111 11233333334321 0000 0 00 0
Q ss_pred HHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHHHHH-----Hhh
Q 010144 337 LAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGT-----GKG 411 (517)
Q Consensus 337 ~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il~~i-----~~~ 411 (517)
. ...+.+++++ +++|++| +|||++.+|..+...-|.+ .+.
T Consensus 277 -----------------~--------~~~~a~~~al-------~~agl~~---~dId~ve~HgtgT~~~d~~e~~al~~~ 321 (413)
T 3o04_A 277 -----------------E--------GAARAMKMAI-------DDAGLTP---DKVDYINAHGTSTPYNDEYETQAIKTV 321 (413)
T ss_dssp -----------------H--------HHHHHHHHHH-------HHHTCCG---GGCCEEECCCCCCHHHHHHHHHHHHHH
T ss_pred -----------------H--------HHHHHHHHHH-------HHcCCCH---HHcCEEEEeCCcCcccCHHHHHHHHHH
Confidence 0 1223445555 6899996 9999999998886655443 344
Q ss_pred CCCCcccchhhhhcccCcccchhhHHHHHHHHH---HHcCCC------------------------CCCCEEEEEEechh
Q 010144 412 LELDEYDLEPARMALHRFGNTSAGGLWYVLGYM---EAKKRL------------------------KKGDRILMISLGAG 464 (517)
Q Consensus 412 Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~---~~~g~i------------------------~~Gd~VlliafG~G 464 (517)
++...+++.. ...-..+||+.+|+=...+..+ ++++.+ .+..+++.-+||.|
T Consensus 322 ~~~~~~~~~v-~s~k~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sfgfg 400 (413)
T 3o04_A 322 FGEHAKKLAI-SSTKSMTGHTLGASGGIEAIFALLTIRDNIIAPTIHLKNQDEVCDLDYVPNEAREANVNVVISNSFGFG 400 (413)
T ss_dssp HGGGTTTSEE-ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSBCSSCCSCCCBSSCEECCCCEEEEEEEETT
T ss_pred hcccCCCCce-ecccccccccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCcccCCCcccCCCCCEEEEeCccCC
Confidence 4544333321 1234567999888865555433 333321 13456778899999
Q ss_pred HHhheeeeEE
Q 010144 465 FKCNNCVWEV 474 (517)
Q Consensus 465 ~t~~a~vlr~ 474 (517)
-+..+++++.
T Consensus 401 G~na~~vl~~ 410 (413)
T 3o04_A 401 GHNATLVFKR 410 (413)
T ss_dssp TEEEEEEEEC
T ss_pred ceEEEEEEEe
Confidence 9888888875
|
| >1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.79 E-value=9.3e-18 Score=177.82 Aligned_cols=311 Identities=9% Similarity=0.024 Sum_probs=196.6
Q ss_pred CceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCC--------cCCCCC----
Q 010144 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNV--------VEGREE---- 150 (517)
Q Consensus 83 ~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~--------~~~~~~---- 150 (517)
++|.|+|+|+..|.. .+.+++.+.+..- ++++.+-...+... ...++.
T Consensus 3 ~~vaI~G~g~~~p~g----~~~~~~w~~l~~g----------------~~~i~~~~~~~~~~~~~~~~~~~~fd~~~~~i 62 (424)
T 1tqy_A 3 RRVVITGVGVRAPGG----NGTRQFWELLTSG----------------RTATRRISFFDPSPYRSQVAAEADFDPVAEGF 62 (424)
T ss_dssp CCEEEEEEEEEETTE----ESHHHHHHHHHHT----------------CCCEEECCSSCCTTSSCCEEECCCCCHHHHTC
T ss_pred CCEEEEeeEEECCCC----CCHHHHHHHHHcC----------------CCceeeCCCcccccCCcceeEEeccCHhhcCC
Confidence 469999999999998 5888888765321 22332211111000 000000
Q ss_pred CccHHHhHhhHHHHHHHHHHHHHHhCCCCCCCcC----EEEEeec-CCC---------------------------CCCc
Q 010144 151 SPSLAEAFSEMDEIIFDTLDKLFARTDISPSEID----VLVVNVS-LFS---------------------------PAPS 198 (517)
Q Consensus 151 ~~~m~~~~~ea~~la~~Aa~~aL~~agi~p~dID----~LI~a~s-~~~---------------------------~~Ps 198 (517)
.+..++......+|+.+|+++||+++|+++++|| .|+++++ .++ ..|+
T Consensus 63 ~~~~~~~~d~~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (424)
T 1tqy_A 63 GPRELDRMDRASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDY 142 (424)
T ss_dssp CHHHHHHSCHHHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHH
T ss_pred CHHHHHhcCHHHHHHHHHHHHHHHHCCCCchhcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhcccccc
Confidence 0011112234478999999999999999999998 5777643 221 1233
Q ss_pred H-HH----HHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCCC----------CC----
Q 010144 199 L-TS----RIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNW----------YC---- 259 (517)
Q Consensus 199 ~-a~----~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~~----------~~---- 259 (517)
. +. +|+..||+++ ++++++. +|++++.||.+|.++|++|..+.+||+++|.+...+ ..
T Consensus 143 ~~a~~~~~~ia~~lgl~g--p~~~v~~-aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~ 219 (424)
T 1tqy_A 143 LVPSVMPAEVAWAVGAEG--PVTMVST-GCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTARND 219 (424)
T ss_dssp HSTTHHHHHHHHHHTCCS--CEEEECC-GGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCS
T ss_pred cccchhHhHHHHhcCCCC--ceEeecC-cccHHHHHHHHHHHHHHCCCCCEEEEeeecccCCHHHHHHHHhhccccCCCC
Confidence 2 34 9999999974 8999997 999999999999999999999999999999852110 00
Q ss_pred -------CCCccccccccccccceEEEEEeecccccccchhhc-cceeeeeeccCcccccceeeccccCCCCCcccchhH
Q 010144 260 -------GREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKL-NCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQL 331 (517)
Q Consensus 260 -------~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l-~~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~ 331 (517)
+-|.. -..+++||||+|+||++.+....+ +-++ ..+..+...+|+... ..+ +
T Consensus 220 ~p~~~~rpfd~~--~~G~v~geGaaavvL~~~~~A~~~-g~~i~a~I~g~~~~~dg~~~---~~p-----------~--- 279 (424)
T 1tqy_A 220 DPEHASRPFDGT--RDGFVLAEGAAMFVLEDYDSALAR-GARIHAEISGYATRCNAYHM---TGL-----------K--- 279 (424)
T ss_dssp CGGGCCCTTBTT--CCCBCEECEEEEEEEEEHHHHHHT-TCCCCEEEEEEEEEECSSCS---SCC-----------C---
T ss_pred CCCCCccCCCCC--CCceeeecceeEEEeccHHHHHhC-CCcEEEEEeeeEEcCCCCCC---CCC-----------C---
Confidence 00111 126899999999999976432100 1111 112333333443221 000 0
Q ss_pred HHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHH-----H
Q 010144 332 TKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVI-----D 406 (517)
Q Consensus 332 ~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il-----~ 406 (517)
|. +. ...+.+++++ +++|++| +|||++.+|+.+..+- +
T Consensus 280 ~~-------------------g~--------~~~~ai~~al-------~~agl~~---~dId~ve~Hgtgt~~gD~~E~~ 322 (424)
T 1tqy_A 280 AD-------------------GR--------EMAETIRVAL-------DESRTDA---TDIDYINAHGSGTRQNDRHETA 322 (424)
T ss_dssp TT-------------------CH--------HHHHHHHHHH-------HHHTCCG---GGCCEEECCCCCCHHHHHHHHH
T ss_pred CC-------------------HH--------HHHHHHHHHH-------HHcCCCH---HHCCEEEecCccCcCcCHHHHH
Confidence 00 00 1223445555 6889997 8999999999987754 3
Q ss_pred HHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHH---HHHcCCCC------------------------CCCEEEEE
Q 010144 407 GTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGY---MEAKKRLK------------------------KGDRILMI 459 (517)
Q Consensus 407 ~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~---~~~~g~i~------------------------~Gd~Vlli 459 (517)
.+.+.++...+++.- -.+-..+||+.+|+-.+.+.. .++.+.+. +.++++.-
T Consensus 323 al~~~f~~~~~~~~v-~s~k~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~ 401 (424)
T 1tqy_A 323 AYKRALGEHARRTPV-SSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECDLDYVPLEARERKLRSVLTV 401 (424)
T ss_dssp HHHHHTGGGGGGSCE-ECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCSBBTTBCSCCCBSSCEECCCSEEEEE
T ss_pred HHHHHhcccCCCCee-eccccccccChhhhHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCcccCCCcccCCCCCEEEEc
Confidence 455566654444421 122456899999988777765 44455321 46889999
Q ss_pred EechhHHhheeeeEE
Q 010144 460 SLGAGFKCNNCVWEV 474 (517)
Q Consensus 460 afG~G~t~~a~vlr~ 474 (517)
+||.|.+..+++++.
T Consensus 402 sfG~GG~n~~~vl~~ 416 (424)
T 1tqy_A 402 GSGFGGFQSAMVLRD 416 (424)
T ss_dssp EEETTTEEEEEEEEC
T ss_pred cccCCceEEEEEEcc
Confidence 999999999999875
|
| >2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.3e-17 Score=175.72 Aligned_cols=319 Identities=7% Similarity=-0.022 Sum_probs=196.8
Q ss_pred CceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEe--ccCC--CcCCCCCCccHHHhH
Q 010144 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETY--GPRN--VVEGREESPSLAEAF 158 (517)
Q Consensus 83 ~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~--~~~~--~~~~~~~~~~m~~~~ 158 (517)
++|.|+|+|+..|.. .+.+++.+.+..-. -.-... .+ +...++..+.. +++- ....++ ..++..
T Consensus 28 ~~vaI~G~g~~~P~g----~~~~~~w~~l~~g~-~~i~~~---~~-~~~~~~~~~~~~~i~~fd~~~~~~~---~~~~~~ 95 (437)
T 2gqd_A 28 KRVVITGMGALSPIG----NDVKTTWENALKGV-NGIDKI---TR-IDTEPYSVHLAGELKNFNIEDHIDK---KEARRM 95 (437)
T ss_dssp CCEEEEEEEEEBTTB----SSHHHHHHHHHTTC-CCEEEC---CS-SCCTTSSCCEEECCSSCCGGGTSCS---TTTTTS
T ss_pred CCEEEEEeeEECCCC----CCHHHHHHHHHcCC-CceeeC---Cc-cccccCccceeEEeCCCChhcCCCH---HHHHhc
Confidence 579999999999998 68888887663210 000000 00 00011111110 0000 000000 111122
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCcC----EEEEeec-CC-----------------CC---------CCcHHHHHHHHc
Q 010144 159 SEMDEIIFDTLDKLFARTDISPSEID----VLVVNVS-LF-----------------SP---------APSLTSRIINRY 207 (517)
Q Consensus 159 ~ea~~la~~Aa~~aL~~agi~p~dID----~LI~a~s-~~-----------------~~---------~Ps~a~~I~~~L 207 (517)
....+|+.+|+++||+++|+++++|| .|+++++ .+ .. .+.++.+|+..|
T Consensus 96 d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~l 175 (437)
T 2gqd_A 96 DRFTQYAIVAAREAVKDAQLDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDL 175 (437)
T ss_dssp CHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCCccccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHh
Confidence 34578999999999999999999999 8888754 22 11 235789999999
Q ss_pred CCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCCC--------------------CCCCCccccc
Q 010144 208 NLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNW--------------------YCGREKSMML 267 (517)
Q Consensus 208 Gl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~~--------------------~~~~dr~~lv 267 (517)
|+++ ++++++. +|++++.||.+|.++|++|..+.|||+++|.....+ ..+-|+..
T Consensus 176 gl~g--p~~~v~~-aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~p~~~~~pfd~~~-- 250 (437)
T 2gqd_A 176 GAKG--PNGATVT-ACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALSTNDDIETACRPFQEGR-- 250 (437)
T ss_dssp TCCS--SEECBCC-GGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCCTTTSSCTTCTTC--
T ss_pred CCCC--ceEEecC-CccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCccCCCCCccccCCCCCCC--
Confidence 9974 8999997 999999999999999999999999999999742100 01112111
Q ss_pred cccccccceEEEEEeecccccccchhhc-cceeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhc
Q 010144 268 SNILFRSGGCSMLLTNNRALKHKAILKL-NCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVL 346 (517)
Q Consensus 268 ~~~lfGDGAAAvLLs~~~~~~~~~~~~l-~~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~l 346 (517)
..+++||||+|+||++.+....+ +-++ ..+..+...+|+.. +..+. |. +
T Consensus 251 ~G~v~geGaaavvL~~~~~A~~~-g~~i~a~I~g~~~~~dg~~---~~~p~--------------~~--~---------- 300 (437)
T 2gqd_A 251 DGFVMGEGAGILVIESLESAQAR-GANIYAEIVGYGTTGDAYH---ITAPA--------------PE--G---------- 300 (437)
T ss_dssp CSBCBBCEEEEEEEEEHHHHHHH-TCCCCEEEEEEEEEECCSC---SSSCC--------------GG--G----------
T ss_pred CCceeeceEEEEEECcHHHHHhC-CCceEEEEEEEEecCCCCC---CCCCC--------------CC--H----------
Confidence 26899999999999875432110 1111 11333333444321 11110 00 0
Q ss_pred ccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHHH-----HHHhhCCCCcccchh
Q 010144 347 VPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVID-----GTGKGLELDEYDLEP 421 (517)
Q Consensus 347 gpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il~-----~i~~~Lgl~~e~~~~ 421 (517)
. ...+.+++++ +++|++| +|||++.+|+.+..+-| .+.+.+|.+.+++.-
T Consensus 301 -------~--------~~~~ai~~Al-------~~Agl~p---~dId~ve~HgtgT~~~D~~E~~al~~~fg~~~~~~~v 355 (437)
T 2gqd_A 301 -------E--------GGSRAMQAAM-------DDAGIEP---KDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKV 355 (437)
T ss_dssp -------H--------HHHHHHHHHH-------HHHTCCG---GGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGTSCEE
T ss_pred -------H--------HHHHHHHHHH-------HHcCCCH---hhCCEEEEECCCCcCcCHHHHHHHHHHHhccCCCcee
Confidence 0 1223455555 6889997 89999999999987644 445566655444421
Q ss_pred hhhcccCcccchhhHHHHHHHHH---HHcCCC------------------------CCCCEEEEEEechhHHhheeeeEE
Q 010144 422 ARMALHRFGNTSAGGLWYVLGYM---EAKKRL------------------------KKGDRILMISLGAGFKCNNCVWEV 474 (517)
Q Consensus 422 S~~~l~~~GNtsSASi~~~L~~~---~~~g~i------------------------~~Gd~VlliafG~G~t~~a~vlr~ 474 (517)
-.+-..+||+.+|+-...+..+ ++.+.+ .+.++++.-+||.|-+..+++++.
T Consensus 356 -~s~k~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 434 (437)
T 2gqd_A 356 -SSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIVPNEAQDLDITYAMSNSLGFGGHNAVLVFKK 434 (437)
T ss_dssp -ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSCCSSCCSBCCBSSCEECCCSEEEEEEECGGGEEEEEEEEC
T ss_pred -ecchhhhcCChhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccCCCccccCCCCEEEEccCcCCCeeEEEEEEe
Confidence 1234568999999877766543 333332 134678889999999888888764
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.78 E-value=7.5e-18 Score=177.03 Aligned_cols=94 Identities=17% Similarity=0.253 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHc
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~a 239 (517)
..+|+.+|+++||+++|++|+|||.|++++ +++...|..+.+++.++|+++++++++++. +|++++.||.+|..+|++
T Consensus 29 ~~~L~~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~~~~~a~~~~~~lGl~~~~p~~~v~~-~Css~~~al~~A~~~I~~ 107 (395)
T 4e1l_A 29 AVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQNVARQIAINAGIPNSVPSYTVNK-LCGSGLKSVQLAAQSITS 107 (395)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCCEEEEECCCCSSTTCCHHHHHHHHTTCCTTSCEEEECC-GGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcchHHHHHHHHcCCCCCceEEEccc-cchHHHHHHHHHHHHHhC
Confidence 346789999999999999999999999975 456677899999999999987799999997 999999999999999999
Q ss_pred CCCCEEEEEEecCCCC
Q 010144 240 YKNKLAIVVSTESMGP 255 (517)
Q Consensus 240 g~~~~aLVVs~E~~s~ 255 (517)
|..+++||+++|.++.
T Consensus 108 G~~~~vlv~g~e~~s~ 123 (395)
T 4e1l_A 108 GENDVVIAGGTENMSQ 123 (395)
T ss_dssp TSCSEEEEEEEEETTT
T ss_pred CCCCEEEEEEEecccC
Confidence 9999999999998875
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.78 E-value=7.3e-18 Score=177.12 Aligned_cols=93 Identities=12% Similarity=0.214 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcC
Q 010144 162 DEIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTY 240 (517)
Q Consensus 162 ~~la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag 240 (517)
.+|+.+|+++||+++|++|+|||.+++++ +++...|..+.+++.++|++.++++++++. +|+|++.||.+|..+|++|
T Consensus 30 ~~L~~~A~~~Al~~agl~~~~Id~v~~g~~~~~~~~~~~a~~i~~~lGl~~~~p~~~v~~-aCss~~~al~~A~~~I~~G 108 (394)
T 3ss6_A 30 VELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTDEANTARTAALAAGFPDTVTGYTIQR-QCSSGMQAIMSAAMQIQLG 108 (394)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCCGGGCSHHHHHHHHTTCCTTCEEEEEEC-GGGHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCHhHCCEEEEEEccCCCccchHHHHHHHHcCCCCCceEEEecC-cchHHHHHHHHHHHHHhCC
Confidence 46689999999999999999999999975 455667889999999999987799999997 9999999999999999999
Q ss_pred CCCEEEEEEecCCCC
Q 010144 241 KNKLAIVVSTESMGP 255 (517)
Q Consensus 241 ~~~~aLVVs~E~~s~ 255 (517)
..+++||+++|.++.
T Consensus 109 ~~~~vlv~G~e~~s~ 123 (394)
T 3ss6_A 109 VSEVVVAGGVEAMSS 123 (394)
T ss_dssp SCSEEEEEEEEECTT
T ss_pred CCCEEEEEEEhhccC
Confidence 999999999999875
|
| >1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-17 Score=176.48 Aligned_cols=310 Identities=11% Similarity=0.044 Sum_probs=197.7
Q ss_pred CceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCC--------cCCCCC---C
Q 010144 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNV--------VEGREE---S 151 (517)
Q Consensus 83 ~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~--------~~~~~~---~ 151 (517)
++|.|+|+|+..|.. .+.+++.+.+..- ++||..-...+... ...++. .
T Consensus 2 ~~v~I~G~g~~~p~g----~~~~~~w~~l~~g----------------~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~ 61 (408)
T 1j3n_A 2 RRVVVTGLGALTPIG----VGQEAFHKAQLAG----------------KSGVRPITRFDASALPVRIAAEVDVDPGAYLD 61 (408)
T ss_dssp CCEEEEEEEEEETTE----ESHHHHHHHHHHT----------------CCCEEECCSSCCTTSSCCEEECCCCCGGGTSC
T ss_pred CCEEEEEeEEECCCC----CCHHHHHHHHHcC----------------CCeeeeccccCcccCccceEEEEccChhhcCC
Confidence 469999999999998 6888888765321 22332211000000 000100 0
Q ss_pred ccHHHhHhhHHHHHHHHHHHHHHhCCCCCCCcCE----EEEeec-CCC-----------------C--------CC-cHH
Q 010144 152 PSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDV----LVVNVS-LFS-----------------P--------AP-SLT 200 (517)
Q Consensus 152 ~~m~~~~~ea~~la~~Aa~~aL~~agi~p~dID~----LI~a~s-~~~-----------------~--------~P-s~a 200 (517)
+......+...+|+.+|+++||+++|+++++||. ++++++ .++ . .| ..+
T Consensus 62 ~~~~~~~d~~~~l~~~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 141 (408)
T 1j3n_A 62 RKELRRLDRFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMAS 141 (408)
T ss_dssp HHHHTTSCHHHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHcCCCccccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHH
Confidence 1111222345789999999999999999999983 555543 221 0 23 568
Q ss_pred HHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCC----------CCC-----------
Q 010144 201 SRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN----------WYC----------- 259 (517)
Q Consensus 201 ~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~----------~~~----------- 259 (517)
.+|+..||+++ +++++.. +|++++.||.+|.++|++|..+.+||+++|..... ...
T Consensus 142 ~~ia~~lgl~g--p~~~v~~-aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~~ 218 (408)
T 1j3n_A 142 AHIAMRYGFTG--PSSTVVT-ACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASR 218 (408)
T ss_dssp HHHHHHHTCCS--CBCCBCC-GGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCC
T ss_pred HHHHHHhCCCC--ceeCccC-chHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhcccccCCCCCCCcCcc
Confidence 99999999974 8999997 99999999999999999999999999999974321 011
Q ss_pred CCCccccccccccccceEEEEEeecccccccchhhc-cceeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHH
Q 010144 260 GREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKL-NCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALA 338 (517)
Q Consensus 260 ~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l-~~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~ 338 (517)
+-|+. -..+++||||+|+||++.+....+ +-++ ..+..+...+|+.. +..+. |. +
T Consensus 219 pfd~~--~dg~v~geGaaavvL~~~~~A~~~-g~~i~a~i~g~~~~~d~~~---~~~p~--------------~~--~-- 274 (408)
T 1j3n_A 219 PFTLS--RDGFVMGEGAGVLVLEAYEHAKKR-GARIYAELVGFGRSADAHH---ITEPH--------------PE--G-- 274 (408)
T ss_dssp TTBTT--CCCBCBBCEEEEEEEEEHHHHHHT-TCCCCEEEEEEEEEECCSC---SSCCC--------------TT--C--
T ss_pred cCcCC--CCceEEeeeEEEEEEeeHHHHHhC-CCcEEEEEEEEEEcCCCCC---CCCCC--------------CC--H--
Confidence 11111 126899999999999875432110 1111 11223333334321 11000 00 0
Q ss_pred HhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHH-----HHHHHhhCC
Q 010144 339 FTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAV-----IDGTGKGLE 413 (517)
Q Consensus 339 ~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~i-----l~~i~~~Lg 413 (517)
. ...+.+++++ +++|++| +|||++.+|+.+..+ +..+.+.+|
T Consensus 275 ---------------~--------~~~~ai~~al-------~~Agl~~---~dId~ve~Hgtgt~~gD~~E~~al~~~~g 321 (408)
T 1j3n_A 275 ---------------K--------GAALAMARAL-------KDAGIAP---EQVGYINAHGTSTPVGDRAEVLAIKRVFG 321 (408)
T ss_dssp ---------------H--------HHHHHHHHHH-------HHHTCCG---GGCCEEECCCCSCHHHHHHHHHHHHHHHH
T ss_pred ---------------H--------HHHHHHHHHH-------HHcCCCH---HHcCEEEEeCCcCcccCHHHHHHHHHHhc
Confidence 0 1223345555 6889996 899999999998876 666778888
Q ss_pred CCcccchhhhhcccCcccchhhHHHHHHHHHH---HcCCC-----------------------CCCCEEEEEEechhHHh
Q 010144 414 LDEYDLEPARMALHRFGNTSAGGLWYVLGYME---AKKRL-----------------------KKGDRILMISLGAGFKC 467 (517)
Q Consensus 414 l~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~---~~g~i-----------------------~~Gd~VlliafG~G~t~ 467 (517)
.+.+++.. ...-..+||+.+|+-.+.|.... +++.+ .+.++++.-+||.|-+-
T Consensus 322 ~~~~~~~v-~s~k~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~sfGfGG~n 400 (408)
T 1j3n_A 322 DHAKRLMV-SSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDLDFVPEPREAKVDYALSNSFAFGGHN 400 (408)
T ss_dssp HHHTTCEE-ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTSCSBCCSSCEECCCSEEEEEEECTTSEE
T ss_pred CcCCCceE-ECchhhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccCCCCcCCCCCEEEEecccCCcce
Confidence 76666521 12346799999999888776433 33321 13467889999999988
Q ss_pred heeeeE
Q 010144 468 NNCVWE 473 (517)
Q Consensus 468 ~a~vlr 473 (517)
.+++++
T Consensus 401 a~~vl~ 406 (408)
T 1j3n_A 401 AVLAFK 406 (408)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 888876
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.77 E-value=9e-18 Score=176.57 Aligned_cols=94 Identities=16% Similarity=0.200 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHc
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~a 239 (517)
+.+|+.+|+++||+++|++|+|||.|++++ ++++..|.++.+|+.++|+++++++++++. +|++++.||.+|..+|++
T Consensus 31 ~~~L~~~A~~~AL~~agl~~~dId~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v~~-aCss~~~al~~A~~~I~~ 109 (396)
T 4dd5_A 31 AVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAGIPVEKPAMTINI-VCGSGLRSVSMASQLIAL 109 (396)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSCEEEECC-GGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCCCCCchHHHHHHHHcCCCCCceEEEecc-ccHHHHHHHHHHHHHHhc
Confidence 356689999999999999999999999975 567778999999999999987899999996 999999999999999999
Q ss_pred CCCCEEEEEEecCCCC
Q 010144 240 YKNKLAIVVSTESMGP 255 (517)
Q Consensus 240 g~~~~aLVVs~E~~s~ 255 (517)
|..++|||+++|.++.
T Consensus 110 G~~~~vLv~g~e~~s~ 125 (396)
T 4dd5_A 110 GDADIMLVGGAENMSM 125 (396)
T ss_dssp TSCSEEEEEEEEESTT
T ss_pred CCCCEEEEEEEecccC
Confidence 9999999999998875
|
| >3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A | Back alignment and structure |
|---|
Probab=99.77 E-value=4.3e-17 Score=173.12 Aligned_cols=312 Identities=11% Similarity=0.016 Sum_probs=200.2
Q ss_pred CCCceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEe-------------ccC---CC
Q 010144 81 RGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETY-------------GPR---NV 144 (517)
Q Consensus 81 ~~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~-------------~~~---~~ 144 (517)
.-+.|.|+|+|+..|-. .+.+++.+.+..- ++||..-.. ++. ..
T Consensus 8 ~~~~~viTG~G~vsp~g----~~~~~~w~~L~~G----------------~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (428)
T 3kzu_A 8 HMRRVVITGLGLVSPLA----SGVEETWKRLLAG----------------ESGARRVTEFEVDDLACQIACRIPVGDGTN 67 (428)
T ss_dssp -CCCEEEEEEEEECSSC----BSHHHHHHHHHTT----------------CCCEEECCSSCCTTSSCCEEECCCBSSSST
T ss_pred cccceEEEeceEECCCc----CCHHHHHHHHHcC----------------CCeeeeCCccccccCcCceeeEeccccccc
Confidence 34679999999999998 8999998876431 122222110 110 00
Q ss_pred cCCCCC---CccHHHhHhhHHHHHHHHHHHHHHhCCCCCCC-cC----EEEEeec-------------------------
Q 010144 145 VEGREE---SPSLAEAFSEMDEIIFDTLDKLFARTDISPSE-ID----VLVVNVS------------------------- 191 (517)
Q Consensus 145 ~~~~~~---~~~m~~~~~ea~~la~~Aa~~aL~~agi~p~d-ID----~LI~a~s------------------------- 191 (517)
...++. .+.-++......+|+.+|+++||+++|+++++ || .++++++
T Consensus 68 ~~fd~~~~i~~~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~ 147 (428)
T 3kzu_A 68 GTFNPDLHMDPKEQRKVDPFIVYAVGAADQALDDAGWHPENDEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPF 147 (428)
T ss_dssp TCBCGGGTSCHHHHTTSCHHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTT
T ss_pred ccCChhhcCCHHHHHhCCHHHHHHHHHHHHHHHhcCCChhhhccccceEEEEcccCCcchhHHHHHHHHHhcCccccCch
Confidence 000000 00111112345789999999999999999999 77 4555542
Q ss_pred --CCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCC---------------
Q 010144 192 --LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMG--------------- 254 (517)
Q Consensus 192 --~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s--------------- 254 (517)
+....+..+.+|+..||+++ ++++++. +|++++.||.+|.++|++|..+.+||+++|...
T Consensus 148 ~~~~~~~~~~a~~is~~lgl~G--p~~~v~t-aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls 224 (428)
T 3kzu_A 148 FIPGRLINLASGHVSIKHKLRG--PNHSVVT-ACATGTHAIGDAARLIAFGDADVMVAGGTESPVSRISLAGFAACKALS 224 (428)
T ss_dssp TTTTTCTTHHHHHHHHHHTCCS--CEECBCC-GGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBC
T ss_pred hcccchhhhHHHHHHHHcCCCC--ceeeecC-ccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCCHHHHHHHHHccccc
Confidence 23445667899999999974 8999997 999999999999999999999999999999832
Q ss_pred CC--------CCCCCCccccccccccccceEEEEEeecccccccchhhc-cceeeeeeccCcccccceeeccccCCCCCc
Q 010144 255 PN--------WYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKL-NCLVRTHFGSNDEAYECCMQVEDQQGHPGF 325 (517)
Q Consensus 255 ~~--------~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l-~~i~~t~~~td~~~~~~~~~~~~~~g~~g~ 325 (517)
.. ..+..++. ..+++||||+|+||++.+.... .+-++ ..+..+....|+.. +..+.
T Consensus 225 ~~~~~~~~~~~~pfd~~~---~G~v~gdGAaavvL~~~~~A~~-~g~~i~a~i~g~~~~~dg~~---~~~p~-------- 289 (428)
T 3kzu_A 225 TERNDDPTAASRPYDEDR---DGFVMGEGAGIVVLEELEHALA-RGAKIYAEVIGYGMSGDAFH---ITAPT-------- 289 (428)
T ss_dssp CSCTTSGGGTCCTTBTTC---CSBCBBCEEEEEEEEEHHHHHH-HTCCCCEEEEEEEEEECCSC---SSSCC--------
T ss_pred cCccCCcccccCCcccCC---CceeecCceEEEEEccHHHHHh-CCCceEEEEEEEEEccCCCC---CCCCC--------
Confidence 10 00011111 2678999999999998543211 01111 11223333333211 10000
Q ss_pred ccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecC----CCC
Q 010144 326 RLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLH----PGG 401 (517)
Q Consensus 326 ~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~H----q~~ 401 (517)
+. + . ...+.+++++ +++|++| +|||++.+| ++.
T Consensus 290 ------~~--~-----------------~--------~~~~ai~~al-------~~Agl~~---~dId~ve~HgtgT~~d 326 (428)
T 3kzu_A 290 ------ES--G-----------------E--------GAQRCMVAAL-------KRAGIVP---DEIDYINAHGTSTMAD 326 (428)
T ss_dssp ------TT--C-----------------H--------HHHHHHHHHH-------HHHTCCG---GGCCEEECCCCSSTTH
T ss_pred ------CC--H-----------------H--------HHHHHHHHHH-------HHcCCCH---HHeeEEEecCCcchhh
Confidence 00 0 0 0123344555 6889996 999999999 888
Q ss_pred hHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHH---HHcCCC------------------------CCCC
Q 010144 402 RAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYM---EAKKRL------------------------KKGD 454 (517)
Q Consensus 402 ~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~---~~~g~i------------------------~~Gd 454 (517)
...++.+.+.+|.+.+++.. -.....+||+.+|+-...+... ++.+.+ .+.+
T Consensus 327 ~~e~~al~~~~g~~~~~~~v-~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (428)
T 3kzu_A 327 TIELGAVERVVGEAAAKISM-SSTKSSIGHLLGAAGAAEAVFSTLAIRDNIAPATLNLDNPAAQTRIDLVPHKPRERKID 405 (428)
T ss_dssp HHHHHHHHHHHGGGGGGCEE-ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBSSCCSSBCCBSSCEECCCS
T ss_pred HHHHHHHHHHhccCCCceee-CCchhhhCCCchhhHHHHHHHHHHHhccCccCCCCCCCCCCCCCCcccCCCCCcCCCCC
Confidence 88888899999988777632 1345678998887766665543 333311 2346
Q ss_pred EEEEEEechhHHhheeeeEE
Q 010144 455 RILMISLGAGFKCNNCVWEV 474 (517)
Q Consensus 455 ~VlliafG~G~t~~a~vlr~ 474 (517)
+++.-+||.|-+..+++++-
T Consensus 406 ~a~~~sfGfgG~na~~vl~~ 425 (428)
T 3kzu_A 406 VALSNSFGFGGTNASLVLRR 425 (428)
T ss_dssp EEEEEEEETTTEEEEEEEEC
T ss_pred EEEEeCcccChhhEEEEEee
Confidence 78888999998888888763
|
| >1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.74 E-value=3.6e-16 Score=165.30 Aligned_cols=321 Identities=11% Similarity=0.018 Sum_probs=193.8
Q ss_pred CceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCC-CCccHHHhHhhH
Q 010144 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGRE-ESPSLAEAFSEM 161 (517)
Q Consensus 83 ~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~-~~~~m~~~~~ea 161 (517)
++|.|+|+|+..|.. .+.+++.+.+..-. -.-... .+ +...++..+....-..+.... -.+..++.....
T Consensus 7 ~~v~I~G~g~~~p~g----~~~~~~w~~l~~g~-~~i~~~---~~-~~~~~~~~~~~~~i~~fd~~~~~~~~~~~~~d~~ 77 (416)
T 1e5m_A 7 KRVVVTGLGAITPIG----NTLQDYWQGLMEGR-NGIGPI---TR-FDASDQACRFGGEVKDFDATQFLDRKEAKRMDRF 77 (416)
T ss_dssp CCEEEEEEEEEBTTB----SSHHHHHHHHHTTC-CCEEEC---CS-SCCTTSSCCEEECCCSCCGGGTSCHHHHHTSCHH
T ss_pred CCEEEEeeeEECCCC----CCHHHHHHHHHcCC-CeEeeC---Cc-cccccCccceeEEeCCCCccccCCHHHHHhcCHH
Confidence 469999999999998 68888887764210 000000 00 000111111110000000000 001112222445
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcC----EEEEeec-CC-----------------CC---------CCcHHHHHHHHcCCC
Q 010144 162 DEIIFDTLDKLFARTDISPSEID----VLVVNVS-LF-----------------SP---------APSLTSRIINRYNLR 210 (517)
Q Consensus 162 ~~la~~Aa~~aL~~agi~p~dID----~LI~a~s-~~-----------------~~---------~Ps~a~~I~~~LGl~ 210 (517)
.+|+.+|+++||+++|+++++|| .|+++++ .+ .. ...++.+|+..||++
T Consensus 78 ~~l~l~aa~~Al~dAg~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~ 157 (416)
T 1e5m_A 78 CHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAK 157 (416)
T ss_dssp HHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHcCCChhhcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHHhCCC
Confidence 78999999999999999999999 6777653 22 01 125789999999997
Q ss_pred CCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCC-CCC---------CCC-----------CCCccccccc
Q 010144 211 NDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESM-GPN---------WYC-----------GREKSMMLSN 269 (517)
Q Consensus 211 ~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~-s~~---------~~~-----------~~dr~~lv~~ 269 (517)
.++++++. +|++++.||.+|.++|++|..+.+||+++|.. +.. ... +-|+. -..
T Consensus 158 --gp~~~v~~-aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~rpfd~~--~~G 232 (416)
T 1e5m_A 158 --GPNNCTVT-ACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKD--RDG 232 (416)
T ss_dssp --SCEECCCC-GGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCGGGTCCTTBTT--CCS
T ss_pred --CceeCccc-hhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcCCccCCCCCCccccccCccC--CCC
Confidence 38999997 99999999999999999999999999999973 320 000 01111 025
Q ss_pred cccccceEEEEEeecccccccchhhc-cceeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhccc
Q 010144 270 ILFRSGGCSMLLTNNRALKHKAILKL-NCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVP 348 (517)
Q Consensus 270 ~lfGDGAAAvLLs~~~~~~~~~~~~l-~~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgp 348 (517)
+++||||+|+||++.+....+ +-++ ..+..+...+|+.. +..+. |. +
T Consensus 233 ~v~geGaaavvL~~~~~A~~~-g~~i~a~I~g~~~~~d~~~---~~~p~--------------~~--~------------ 280 (416)
T 1e5m_A 233 FVMGEGSGILILEELESALAR-GAKIYGEMVGYAMTCDAYH---ITAPV--------------PD--G------------ 280 (416)
T ss_dssp BCBBCEEEEEEEEEHHHHHHT-TCCCCEEEEEEEEEECCSC---SSSCC--------------TT--C------------
T ss_pred ceeeeeEEEEEECcHHHHHHC-CCeEEEEEEEEEEccCCCC---CCCCC--------------CC--H------------
Confidence 889999999999875432100 1111 12333334444421 11110 00 0
Q ss_pred ccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHHHH-----HHhhCCCCcccchhhh
Q 010144 349 KILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDG-----TGKGLELDEYDLEPAR 423 (517)
Q Consensus 349 l~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il~~-----i~~~Lgl~~e~~~~S~ 423 (517)
. ...+.+++++ +++|++| +|||++.+|+.+..+-|. +.+.+|...+++.- -
T Consensus 281 -----~--------~~~~ai~~al-------~~agl~~---~dId~ve~Hgtgt~~~D~~E~~al~~~~g~~~~~~~v-~ 336 (416)
T 1e5m_A 281 -----R--------GATRAIAWAL-------KDSGLKP---EMVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAV-S 336 (416)
T ss_dssp -----H--------HHHHHHHHHH-------HHHTCCG---GGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGGSEE-E
T ss_pred -----H--------HHHHHHHHHH-------HHcCCCH---hHCCEEEEECCCCcCcCHHHHHHHHHHHcccCCCCee-e
Confidence 0 1223445555 6889997 899999999998876543 44556654444421 1
Q ss_pred hcccCcccchhhHHHHHHHH---HHHcCCCC------------------------CCCEEEEEEechhHHhheeeeE
Q 010144 424 MALHRFGNTSAGGLWYVLGY---MEAKKRLK------------------------KGDRILMISLGAGFKCNNCVWE 473 (517)
Q Consensus 424 ~~l~~~GNtsSASi~~~L~~---~~~~g~i~------------------------~Gd~VlliafG~G~t~~a~vlr 473 (517)
.+-..+||+.+|+-...+.. .++.+.+. +.++++.-+||.|-+-.+++++
T Consensus 337 s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~n~~~vl~ 413 (416)
T 1e5m_A 337 STKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLDYVPGQSRALIVDVALSNSFGFGGHNVTLAFK 413 (416)
T ss_dssp CTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEE
T ss_pred CcchhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccCCccccCCCCEEEEccccCCCeeEEEEEE
Confidence 23456899998886665543 33333210 2367788899999887777776
|
| >2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.74 E-value=6.1e-16 Score=164.58 Aligned_cols=316 Identities=10% Similarity=0.029 Sum_probs=192.9
Q ss_pred cCCCceEEEEEEEEeCCCCCceecHHHHHHHHHhcc----cCChHHHHHHHHHHHHhCCceeE--eccCCCcCCCCC--C
Q 010144 80 KRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNK----KLGLEEYRFLLKNMVSSGIGEET--YGPRNVVEGREE--S 151 (517)
Q Consensus 80 ~~~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~----~~~~~~~~~~~ri~~~sGI~~r~--~~~~~~~~~~~~--~ 151 (517)
...++|.|+|+|+..|.. .+.+++.+.+..-. ..+. |- .+..++..+. .++++ ++. .
T Consensus 25 ~~~~~vaI~G~g~~~p~g----~~~~~~w~~l~~g~~~i~~~~~----~~---~~~~~~~~~~~~~v~~d----~~~~~~ 89 (434)
T 2gp6_A 25 KAFPYVVVTGIAMTTALA----TDAETTWKLLLDRQSGIRTLDD----PF---VEEFDLPVRIGGHLLEE----FDHQLT 89 (434)
T ss_dssp TTSCCEEEEEEEEECSSC----SSHHHHHHHHHTTCCCEEECCC----HH---HHHHCCSCCEEECCSCC----STTSSC
T ss_pred CCCCCEEEEeeEEeCCCC----CCHHHHHHHHHcCCCeeeeCCc----cc---cccccCccceeEEcCCc----hhhhCC
Confidence 455689999999999998 68999988764321 1111 10 0112333221 12111 010 0
Q ss_pred ccHHHhHhhHHHHHHHHHHHHHHhCCCC---CCCcCEEEEeecCCC-----------------CC--------C-cHHHH
Q 010144 152 PSLAEAFSEMDEIIFDTLDKLFARTDIS---PSEIDVLVVNVSLFS-----------------PA--------P-SLTSR 202 (517)
Q Consensus 152 ~~m~~~~~ea~~la~~Aa~~aL~~agi~---p~dID~LI~a~s~~~-----------------~~--------P-s~a~~ 202 (517)
+..++......+|+.+|+++||+++|++ +++|++++-+++.++ .. | .++.+
T Consensus 90 ~~~~~~~d~~~~l~l~aa~~ALedAG~~~~~~~~igv~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ 169 (434)
T 2gp6_A 90 RIELRRMGYLQRMSTVLSRRLWENAGSPEVDTNRLMVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAA 169 (434)
T ss_dssp HHHHHTCCHHHHHHHHHHHHHHHHTTCCCCCTTSEEEEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHhcCCCccCCCceEEEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHH
Confidence 1112222445789999999999999984 566765443333332 11 2 46899
Q ss_pred HHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCC-----------CCC-----CC-----
Q 010144 203 IINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN-----------WYC-----GR----- 261 (517)
Q Consensus 203 I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~-----------~~~-----~~----- 261 (517)
|+..||++ .+++++.. +|++++.||.+|.++|++|..+.+||+++|..+.. ... +.
T Consensus 170 is~~lgl~--Gp~~~v~~-aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~p 246 (434)
T 2gp6_A 170 VGLERHAK--AGVMTPVS-ACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRP 246 (434)
T ss_dssp HHHHSCCC--SCEECEEC-GGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCCHHHHHHHHTTTSSCCCCTTCTTTSCCS
T ss_pred HhhhhcCC--CCeEEeCC-CCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHHHHHhcCCCCCCCCceec
Confidence 99999997 48999997 99999999999999999999999999999986541 111 11
Q ss_pred -CccccccccccccceEEEEEeecccccccchhhc-cceeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHH
Q 010144 262 -EKSMMLSNILFRSGGCSMLLTNNRALKHKAILKL-NCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAF 339 (517)
Q Consensus 262 -dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l-~~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~ 339 (517)
|.. -..+++||||+|+||++.+.... .+-++ ..+..+...+|+.. +..+. +. +
T Consensus 247 fd~~--~~g~v~gdGAaavvL~~~~~A~~-~g~~i~a~I~g~~~~~Dg~~---~~~p~--------------~~--~--- 301 (434)
T 2gp6_A 247 FDRD--RDGFVFGEGGALLLIETEEHAKA-RGANILARIMGASITSDGFH---MVAPD--------------PN--G--- 301 (434)
T ss_dssp SBTT--CCCCCBBCCEEEEEEEEHHHHHT-TTCCCCEEEEEEEEEECCSC---SSSCC--------------TT--C---
T ss_pred cccc--CCCcceecceEEEEeCcHHHHHH-CCCceEEEEEEEEEecCCCC---CCCCC--------------CC--h---
Confidence 111 12679999999999987543211 01111 12333333444422 11110 00 0
Q ss_pred hhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHHHH-----HHhhCCC
Q 010144 340 TMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDG-----TGKGLEL 414 (517)
Q Consensus 340 ~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il~~-----i~~~Lgl 414 (517)
. ...+.+++++ +++|++| +|||++.+|..+..+.|. +.+.+|-
T Consensus 302 --------------~--------~~~~ai~~al-------~~Agl~~---~dId~ve~Hgtgt~~~D~~E~~al~~~fg~ 349 (434)
T 2gp6_A 302 --------------E--------RAGHAITRAI-------QLAGLAP---GDIDHVNAHATGTQVGDLAEGRAINNALGG 349 (434)
T ss_dssp --------------H--------HHHHHHHHHH-------HHTTCCT---TTEEEEECCCCSCHHHHHHHHHHHHHHHTT
T ss_pred --------------H--------HHHHHHHHHH-------HHcCCCH---HHcCEEEEeCCcCccchHHHHHHHHHHhcc
Confidence 0 1223445555 6889997 899999999777666443 3333432
Q ss_pred CcccchhhhhcccCcccchhhHHHHHHHH---HHHcCCCC------------------------CCCEEEEEEechhHHh
Q 010144 415 DEYDLEPARMALHRFGNTSAGGLWYVLGY---MEAKKRLK------------------------KGDRILMISLGAGFKC 467 (517)
Q Consensus 415 ~~e~~~~S~~~l~~~GNtsSASi~~~L~~---~~~~g~i~------------------------~Gd~VlliafG~G~t~ 467 (517)
. ++.. ......+||+.+|+-...+.. .++.+.+. +..+++.-+||.|-+-
T Consensus 350 ~--~~~v-~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~n 426 (434)
T 2gp6_A 350 N--RPAV-YAPKSALGHSVGAVGAVESILTVLALRDQVIPPTLNLVNLDPEIDLDVVAGEPRPGNYRYAINNSFGFGGHN 426 (434)
T ss_dssp C--CCEE-CCTHHHHCBCTTTHHHHHHHHHHHHHHHSCCCCCSSCSSBCTTCCCEECCSSCCCSCCCEEEEEEEETTTEE
T ss_pred C--CCCc-ccchhhhcCchhhhHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCccccCCCccCCCCCEEEEeCCcCCCee
Confidence 1 2321 234567899988876666543 34445432 2356788899999887
Q ss_pred heeeeE
Q 010144 468 NNCVWE 473 (517)
Q Consensus 468 ~a~vlr 473 (517)
.+++++
T Consensus 427 a~~vl~ 432 (434)
T 2gp6_A 427 VAIAFG 432 (434)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 777775
|
| >2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A | Back alignment and structure |
|---|
Probab=99.73 E-value=2.4e-16 Score=167.89 Aligned_cols=319 Identities=13% Similarity=0.073 Sum_probs=193.7
Q ss_pred CCCceEEEEEEEEeCCCCCceecHHHHHHHHHhcc----cCChHHHHHHHHHHHHhCCceeE--eccC----CCcCCCC-
Q 010144 81 RGQCCYMLAYECYKPCDETRRLDTESCARVVWRNK----KLGLEEYRFLLKNMVSSGIGEET--YGPR----NVVEGRE- 149 (517)
Q Consensus 81 ~~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~----~~~~~~~~~~~ri~~~sGI~~r~--~~~~----~~~~~~~- 149 (517)
..++|.|+|+|+..|.. .+.+++.+.+..-. ..+.. ...+...+. .+++ ..+....
T Consensus 19 ~~~~v~ItG~g~~~p~g----~~~~~~w~~l~~g~~~i~~~~~~---------~~~~~~~~~~~~~~~~~~~~~fd~~~~ 85 (438)
T 2iwz_A 19 LHRRVVITGIGLVTPLG----VGTHLVWDRLIGGESGIVSLVGE---------EYKSIPCSVAAYVPRGSDEGQFNEQNF 85 (438)
T ss_dssp EECCEEEEEEEEEETTE----ESHHHHHHHHHTTCCCEEECCSG---------GGTTSSCCEEECCCBSSSTTSBCGGGT
T ss_pred CCCCEEEEeeeEECCCC----CCHHHHHHHHHcCCCccccCCch---------hcccCccceeeeeccccccccCChhhc
Confidence 44679999999999987 78899988764311 01100 001111111 1111 0000000
Q ss_pred CCccHHHhHhhHHHHHHHHHHHHHHhCCCCC-CCcC----EEEEeec-CCC-----------------C--------CC-
Q 010144 150 ESPSLAEAFSEMDEIIFDTLDKLFARTDISP-SEID----VLVVNVS-LFS-----------------P--------AP- 197 (517)
Q Consensus 150 ~~~~m~~~~~ea~~la~~Aa~~aL~~agi~p-~dID----~LI~a~s-~~~-----------------~--------~P- 197 (517)
-.+..++......+|+.+|+++||+++|+++ ++|| .|+++++ .++ . .|
T Consensus 86 ~~~~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 165 (438)
T 2iwz_A 86 VSKSDIKSMSSPTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVN 165 (438)
T ss_dssp SCHHHHTTSCHHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTT
T ss_pred CCHHHHHhcCHHHHHHHHHHHHHHHHcCCCCcccccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhh
Confidence 0011111223457899999999999999998 8787 4666543 221 1 22
Q ss_pred cHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCC-CCC---------CC---------
Q 010144 198 SLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESM-GPN---------WY--------- 258 (517)
Q Consensus 198 s~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~-s~~---------~~--------- 258 (517)
.++.+|+..||+++ ++++++. +|++++.||.+|.++|++|..+.|||+++|.. +.. ..
T Consensus 166 ~~a~~ia~~lgl~g--p~~~v~t-aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~p~~~ 242 (438)
T 2iwz_A 166 MAAGQVSIRYKLKG--PNHAVST-ACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALSTNSDPKLA 242 (438)
T ss_dssp HHHHHHHHHHTCCS--CEECBCC-GGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCSCTTTS
T ss_pred HHHHHHHHHhCCCC--ceeeecC-chhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcCHHHHHHHHhcCCcCCCCCCCcc
Confidence 57899999999974 8999997 99999999999999999999999999999973 210 00
Q ss_pred -CCCCccccccccccccceEEEEEeecccccccchhhc-cceeeeeeccCcccccceeeccccCCCCCcccchhHHHHHH
Q 010144 259 -CGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKL-NCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAA 336 (517)
Q Consensus 259 -~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l-~~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~ 336 (517)
.+-|... ..+++||||+|+||++.+....+ +-++ ..+..+...+|+.. +..|. |. +
T Consensus 243 ~~pfd~~~--~G~~~geGAaavvL~~~~~A~~~-g~~i~a~I~g~~~~~d~~~---~t~p~--------------~~--~ 300 (438)
T 2iwz_A 243 CRPFHPKR--DGFVMGEGAAVLVLEEYEHAVQR-RARIYAEVLGYGLSGDAGH---ITAPD--------------PE--G 300 (438)
T ss_dssp CCTTCTTC--CSBCBBCEEEEEEEEEHHHHHHT-TCCCCEEEEEEEEEECCSC---SSSCC--------------TT--C
T ss_pred cccCCCCC--CCEEeeceEEEEEeccHHHHHhC-CCceEEEEecceecCCCCC---CCCCC--------------CC--H
Confidence 0011111 25899999999999975432110 1111 11333333444321 11110 00 0
Q ss_pred HHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHHH-----HHHhh
Q 010144 337 LAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVID-----GTGKG 411 (517)
Q Consensus 337 ~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il~-----~i~~~ 411 (517)
. ...+.+++++ +++|++| +|||++.+|+.+..+-| .+.+.
T Consensus 301 -----------------~--------~~~~ai~~Al-------~~Agl~p---~dId~ve~HgtgT~~gD~~E~~al~~~ 345 (438)
T 2iwz_A 301 -----------------E--------GALRCMAAAL-------KDAGVQP---EEISYINAHATSTPLGDAAENKAIKHL 345 (438)
T ss_dssp -----------------H--------HHHHHHHHHH-------HHHTCCG---GGCCEEECCCCSCHHHHHHHHHHHHHH
T ss_pred -----------------H--------HHHHHHHHHH-------HHcCCCH---HHcCEEEecCCCCcccCHHHHHHHHHH
Confidence 0 1223445555 6889997 99999999999877643 34455
Q ss_pred CCCCcccchhhhhcccCcccchhhHHHHHHHHH---HHcCCCC------------------------C---CCEEEEEEe
Q 010144 412 LELDEYDLEPARMALHRFGNTSAGGLWYVLGYM---EAKKRLK------------------------K---GDRILMISL 461 (517)
Q Consensus 412 Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~---~~~g~i~------------------------~---Gd~Vlliaf 461 (517)
+|...+++.- -.+-..+||+.+|+-...+..+ ++.+.+. + -.+++.-+|
T Consensus 346 fg~~~~~~~v-~s~K~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~a~~~sf 424 (438)
T 2iwz_A 346 FKDHAYALAV-SSTKGATGHLLGAAGAVEAAFTTLACYYQKLPPTLNLDCSEPEFDLNYVPLKAQEWKTEKRFIGLTNSF 424 (438)
T ss_dssp HGGGGGTSEE-ECCHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSCCCTTCCSBCCBSSCEECCCSSSCEEEEEEE
T ss_pred HhccCCCcce-ecchhhhcCCHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCccccCCCcccCCCCCccEEEEecC
Confidence 5554444421 1234567999998887776543 3343311 1 356777899
Q ss_pred chhHHhheeeeE
Q 010144 462 GAGFKCNNCVWE 473 (517)
Q Consensus 462 G~G~t~~a~vlr 473 (517)
|.|-+-.+++++
T Consensus 425 GfGG~na~~vl~ 436 (438)
T 2iwz_A 425 GFGGTNATLCIA 436 (438)
T ss_dssp ETTTEEEEEEEE
T ss_pred cCCCeeEEEEEe
Confidence 999887777775
|
| >1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A | Back alignment and structure |
|---|
Probab=99.73 E-value=3.8e-16 Score=165.85 Aligned_cols=321 Identities=9% Similarity=-0.010 Sum_probs=191.2
Q ss_pred CCCceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCC-CCccHHHhHh
Q 010144 81 RGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGRE-ESPSLAEAFS 159 (517)
Q Consensus 81 ~~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~-~~~~m~~~~~ 159 (517)
+-++|+|+|+|+..|.. .+.+++.+.+..-. -.-... .+ +...++..+....-..+.... -.+...+...
T Consensus 21 ~m~~v~ItG~g~~~P~g----~~~~~~w~~l~~g~-~~i~~~---~~-~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~d 91 (430)
T 1ox0_A 21 KLNRVVVTGYGVTSPIG----NTPEEFWNSLATGK-IGIGGI---TK-FDHSDFDVHNAAEIQDFPFDKYFVKKDTNRFD 91 (430)
T ss_dssp CCCCEEEEEEEEEBTTB----SSHHHHHHHHHHTC-CCEEEC---CS-SCCTTSSCCEEECCSSCCHHHHCCGGGGGTCC
T ss_pred cCCCEEEEEEEEECCCc----CCHHHHHHHHHcCC-CeeeeC---Cc-ccccCCccceeeeccCCChhhcCCHHHHHhcC
Confidence 34579999999999997 78888887663210 000000 00 000111111100000000000 0001111123
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCcC----EEEEeec-CC---------------------CCC----C-cHHHHHHHHcC
Q 010144 160 EMDEIIFDTLDKLFARTDISPSEID----VLVVNVS-LF---------------------SPA----P-SLTSRIINRYN 208 (517)
Q Consensus 160 ea~~la~~Aa~~aL~~agi~p~dID----~LI~a~s-~~---------------------~~~----P-s~a~~I~~~LG 208 (517)
...+|+.+|+++||+++|+++++|| .++++++ .+ +.. | .++.+|+..||
T Consensus 92 ~~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 171 (430)
T 1ox0_A 92 NYSLYALYAAQEAVNHANLDVEALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFG 171 (430)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTTTSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCChhhcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHhc
Confidence 4478999999999999999999998 4666643 22 111 2 46899999999
Q ss_pred CCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCC----------CCC----C------CCcccccc
Q 010144 209 LRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN----------WYC----G------REKSMMLS 268 (517)
Q Consensus 209 l~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~----------~~~----~------~dr~~lv~ 268 (517)
+++ ++++++. +|++++.||.+|.++|++|..+.|||+++|.+... ... + -|+. -.
T Consensus 172 l~G--p~~~v~~-aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~p~~~~~pFd~~--~~ 246 (430)
T 1ox0_A 172 ANG--VCKSINT-ACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALSTTEDPTRASIPFDKD--RN 246 (430)
T ss_dssp CCS--CEECCCC-GGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCSSTTSSSCTTBTT--CC
T ss_pred CCC--ceEeecC-chHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhCCCccCCCCCCCCCCCCCCC--CC
Confidence 974 8999997 99999999999999999999999999999985421 011 0 0111 12
Q ss_pred ccccccceEEEEEeecccccccchhhc-cceeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhcc
Q 010144 269 NILFRSGGCSMLLTNNRALKHKAILKL-NCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLV 347 (517)
Q Consensus 269 ~~lfGDGAAAvLLs~~~~~~~~~~~~l-~~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lg 347 (517)
.+++||||+|+||++.+.... .+.++ ..+..+...+|+.. +..+. +. +
T Consensus 247 g~~~geGAaavvL~~~~~A~~-~g~~i~a~I~g~~~~~dg~~---~~~p~--------------~~--~----------- 295 (430)
T 1ox0_A 247 GFVMGEGSGMLVLESLEHAEK-RGATILAEVVGYGNTCDAYH---MTSPH--------------PE--G----------- 295 (430)
T ss_dssp SBCBCCEEEEEEEEEHHHHHH-TTCCCCEEEEEEEEEECCSC---SSSCC--------------TT--C-----------
T ss_pred CccccceEEEEEECcHHHHHh-CCCceEEEEEEEEEecCCCC---CCCCC--------------CC--h-----------
Confidence 689999999999997643211 01111 11223333334321 11110 00 0
Q ss_pred cccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHHHH-----HHhhCCCCcccchhh
Q 010144 348 PKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDG-----TGKGLELDEYDLEPA 422 (517)
Q Consensus 348 pl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il~~-----i~~~Lgl~~e~~~~S 422 (517)
. ...+.+++++ +++|++| +|||++.+|+.+..+-|. +.+.+|-+. .+
T Consensus 296 ------~--------~~~~ai~~al-------~~Agl~~---~dId~ve~Hgtgt~~~D~~E~~al~~~~g~~~-~v--- 347 (430)
T 1ox0_A 296 ------Q--------GAIKAIKLAL-------EEAEISP---EQVAYVNAHGTSTPANEKGESGAIVAVLGKEV-PV--- 347 (430)
T ss_dssp ------H--------HHHHHHHHHH-------HHHTCCG---GGCCCEECCCCSCHHHHHHHHHHHHHHHCSSS-EE---
T ss_pred ------H--------HHHHHHHHHH-------HHhCcCH---HHcCEEEEeCCcCcccCHHHHHHHHHHhCCCc-ee---
Confidence 0 1223445555 6889996 899999999999877653 334444211 11
Q ss_pred hhcccCcccchhhHHHHHHHHH---HHcCCC------------------------CCCCEEEEEEechhHHhheeeeEE
Q 010144 423 RMALHRFGNTSAGGLWYVLGYM---EAKKRL------------------------KKGDRILMISLGAGFKCNNCVWEV 474 (517)
Q Consensus 423 ~~~l~~~GNtsSASi~~~L~~~---~~~g~i------------------------~~Gd~VlliafG~G~t~~a~vlr~ 474 (517)
-.+-..+||+.+|+-.+.+..+ ++.+.+ .+..+++.-+||.|-+..+++++.
T Consensus 348 ~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 426 (430)
T 1ox0_A 348 SSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEANVVYGQGLEKEIPYAISNTFGFGGHNAVLAFKR 426 (430)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSBCTTCCSEECBSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred cccccccccchhhHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCCCCCcCCCCCEEEEeCccCCCceEEEEEee
Confidence 1223447999988876665543 333321 124678889999999888888864
|
| >1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.72 E-value=6.4e-16 Score=163.23 Aligned_cols=314 Identities=12% Similarity=0.041 Sum_probs=189.4
Q ss_pred cCCCceEEEEEEEEeCCCCCceecHHHHHHHHHhcc-cCChHHHHHHHHHHHHhCCceeE--eccCC--CcCCCCCCccH
Q 010144 80 KRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNK-KLGLEEYRFLLKNMVSSGIGEET--YGPRN--VVEGREESPSL 154 (517)
Q Consensus 80 ~~~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~-~~~~~~~~~~~ri~~~sGI~~r~--~~~~~--~~~~~~~~~~m 154 (517)
...++|.|+|+|+..|.. .+.+++.+.+..-. .+.+-. +| ...++..+. .+++- ....++ ..
T Consensus 6 ~~~~~v~I~G~g~~~p~g----~~~~~~w~~l~~g~~~i~~~~-~~-----~~~~~~~~~~~~v~~fd~~~~~~~---~~ 72 (415)
T 1tqy_B 6 DDDKSVLITGVGVVAPNG----LGLAPYWSAVLDGRHGLGPVT-RF-----DVSRYPATLAGQIDDFHAPDHIPG---RL 72 (415)
T ss_dssp ----CEEEEEEEEEETTE----ESHHHHHHHHHTTCCCEEECT-TT-----TGGGSSCCEEECCCSCCHHHHSCT---TT
T ss_pred CCCCCEEEEeeEEECCCC----CCHHHHHHHHHcCCCcEEECC-cc-----cccCCCcceEEEeCCCCchhcCCH---HH
Confidence 456789999999999998 68899988764311 000000 00 000111110 01000 000000 01
Q ss_pred HHhHhhHHHHHHHHHHHHHHhCCCCCCCcC----EEEEeec-CC--------------------------CCCCcHHHHH
Q 010144 155 AEAFSEMDEIIFDTLDKLFARTDISPSEID----VLVVNVS-LF--------------------------SPAPSLTSRI 203 (517)
Q Consensus 155 ~~~~~ea~~la~~Aa~~aL~~agi~p~dID----~LI~a~s-~~--------------------------~~~Ps~a~~I 203 (517)
........+|+.+|+++||+++|+++++|| .|+++++ .+ +..+.++.+|
T Consensus 73 ~~~~d~~~~l~l~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i 152 (415)
T 1tqy_B 73 LPQTDPSTRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQI 152 (415)
T ss_dssp GGGCCHHHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHH
Confidence 112234578999999999999999999998 7777654 22 1346789999
Q ss_pred HHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCC-CCC--------------------CCCCCC
Q 010144 204 INRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESM-GPN--------------------WYCGRE 262 (517)
Q Consensus 204 ~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~-s~~--------------------~~~~~d 262 (517)
+..||+++ ++++++. +|++++.||.+|.++|++| .+.+||+++|.+ +.. ..+..+
T Consensus 153 a~~lgl~g--p~~~v~~-aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~pfd~ 228 (415)
T 1tqy_B 153 SIRHGMRG--PSSALVA-EQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRISTATDPDRAYLPFDE 228 (415)
T ss_dssp HHHHTCCS--SCEEEEC-GGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTTSCBCCCSCGGGSCCTTST
T ss_pred HHHhCCCC--ceEeecC-CccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCCHHHHHHHHhccCccCCCCCCCCcCCCCC
Confidence 99999974 7999997 9999999999999999999 999999999983 210 000111
Q ss_pred ccccccccccccceEEEEEeecccccccchh-hc-cceeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHh
Q 010144 263 KSMMLSNILFRSGGCSMLLTNNRALKHKAIL-KL-NCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFT 340 (517)
Q Consensus 263 r~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~-~l-~~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~ 340 (517)
+. ..+++||||+|+||++.+....+ +- ++ ..+..+...+|+.. +..+. +
T Consensus 229 ~~---~G~~~geGaaavvL~~~~~A~~~-g~~~i~a~I~g~~~~~dg~~---~~~p~--------------~-------- 279 (415)
T 1tqy_B 229 RA---AGYVPGEGGAILVLEDSAAAEAR-GRHDAYGELAGCASTFDPAP---GSGRP--------------A-------- 279 (415)
T ss_dssp TC---CCBCBBCEEEEEEEEEHHHHHHH-TCCCCSEEEEEEEEEECCCT---TCCCC--------------C--------
T ss_pred CC---CCcceeeeEEEEEECcHHHHHHC-CCCceEEEEEEEEEccCCCC---CCCCC--------------H--------
Confidence 11 26899999999999976432110 10 11 11233333334321 11110 0
Q ss_pred hhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHHHH-----HHhhCCCC
Q 010144 341 MNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDG-----TGKGLELD 415 (517)
Q Consensus 341 ~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il~~-----i~~~Lgl~ 415 (517)
+ ..+.+++++ +++|++| +|||++..|..+..+-|. +.+.+|-.
T Consensus 280 ------~----------------~~~ai~~al-------~~Agl~~---~dId~ve~Hgtgt~~~D~~E~~al~~~~g~~ 327 (415)
T 1tqy_B 280 ------G----------------LERAIRLAL-------NDAGTGP---EDVDVVFADGAGVPELDAAEARAIGRVFGRE 327 (415)
T ss_dssp ------S----------------HHHHHHHHH-------HHHTCCG---GGCCEEECCCCCSHHHHHHHHHHHHHHHCTT
T ss_pred ------H----------------HHHHHHHHH-------HHcCCCH---hHCCEEEEeCCCCcCcCHHHHHHHHHHhCCC
Confidence 0 112344455 6889996 899999999888765543 33334422
Q ss_pred cccchhhhhcccCcccchhhHHHHHHHHH---HHcCCC------------------------CCCCEEEEEEechhHHhh
Q 010144 416 EYDLEPARMALHRFGNTSAGGLWYVLGYM---EAKKRL------------------------KKGDRILMISLGAGFKCN 468 (517)
Q Consensus 416 ~e~~~~S~~~l~~~GNtsSASi~~~L~~~---~~~g~i------------------------~~Gd~VlliafG~G~t~~ 468 (517)
.-.+ -.+-..+||+.+|+-...+..+ ++++.+ ....+++.-+||.|-+..
T Consensus 328 ~~~v---~s~K~~~GH~~gAaG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfgG~n~ 404 (415)
T 1tqy_B 328 GVPV---TVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYGIDLVLGEPRSTAPRTALVLARGRWGFNS 404 (415)
T ss_dssp CSEE---ECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCCCCGGGCCEECBSSCBCCCCSEEEEEEEETTTEEE
T ss_pred CceE---eccchhhccChHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccCCCCccCCCCEEEEecCcCCCeEE
Confidence 1112 1233457999988866665433 333321 134678899999999888
Q ss_pred eeeeEE
Q 010144 469 NCVWEV 474 (517)
Q Consensus 469 a~vlr~ 474 (517)
+++++-
T Consensus 405 ~~vl~~ 410 (415)
T 1tqy_B 405 AAVLRR 410 (415)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 888875
|
| >4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} | Back alignment and structure |
|---|
Probab=99.70 E-value=9.1e-16 Score=162.01 Aligned_cols=316 Identities=8% Similarity=0.006 Sum_probs=191.2
Q ss_pred CceEEEEEEEEeCCCCCceecHHHHHHHHHhcc-cCChHHHHHHHHHHHHh-CCceeEeccCCCcCCCCC-CccHHHhHh
Q 010144 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNK-KLGLEEYRFLLKNMVSS-GIGEETYGPRNVVEGREE-SPSLAEAFS 159 (517)
Q Consensus 83 ~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~-~~~~~~~~~~~ri~~~s-GI~~r~~~~~~~~~~~~~-~~~m~~~~~ 159 (517)
++|.|+|+|+..|.. .+.+++.+.+..-. .+.+-. + ++.. ++..+....-..+..+.. .+...+...
T Consensus 6 ~~v~ItG~g~~~p~g----~~~~~~w~~l~~g~~~i~~~~-----~-~~~~~~~~~~~~~~v~~fd~~~~i~~~~~~~~d 75 (412)
T 4ewg_A 6 KRVVITGMGGVTALG----SRWDEIEAALKAGRNAVRRMP-----D-WDYFESLHTRLAAPLPGFAQPADWPRKKTRSMG 75 (412)
T ss_dssp CCEEEEEEEEEBTTB----SSHHHHHHHHHHTCCCCEECG-----G-GGGSSSCCCCEEBCCSCCCCCTTSCHHHHTTCC
T ss_pred CEEEEEeeEEECCCc----CCHHHHHHHHHcCCCceeeCC-----c-cccccCCccceeeecCCCChhhhCCHHHHhhCC
Confidence 579999999999998 78899988764311 000000 0 0111 222221110000000000 011111223
Q ss_pred hHHHHHHHHHHHHHHhCCC-CCCCcC----EEEEeecCC---------------------------CCCCcHHHHHHHHc
Q 010144 160 EMDEIIFDTLDKLFARTDI-SPSEID----VLVVNVSLF---------------------------SPAPSLTSRIINRY 207 (517)
Q Consensus 160 ea~~la~~Aa~~aL~~agi-~p~dID----~LI~a~s~~---------------------------~~~Ps~a~~I~~~L 207 (517)
...+|+.+|+++||+++|+ ++++|| .++++++.. ...+..+.+|+..|
T Consensus 76 ~~~~l~l~aa~~Al~dAGl~~~~~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (412)
T 4ewg_A 76 RVSMYAVRASELALADAGFAGDESISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFW 155 (412)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTCGGGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhcCCCCccccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHHHHHHHHh
Confidence 4578999999999999999 777787 777764321 12456789999999
Q ss_pred CCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCCC---------CC-----------CCCccccc
Q 010144 208 NLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNW---------YC-----------GREKSMML 267 (517)
Q Consensus 208 Gl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~~---------~~-----------~~dr~~lv 267 (517)
|+++ ++++++. +|++++.||..|.++|++|..+.+||+++|.++... .. +-|...
T Consensus 156 gl~g--p~~~v~~-aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~s~~~~~~~~~~~~l~~~~~~p~~~~rpfd~~~-- 230 (412)
T 4ewg_A 156 DLKG--RIVPTSS-ACASGSQAIGYAYENIAMGKQTLMLAGGAEELSGPAVAVFDTLYATSTRNDEPHLTPRPFDAKR-- 230 (412)
T ss_dssp TCCS--CEEECCC-GGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHTTTCBCCCTTCGGGCCCTTBTTC--
T ss_pred CCCC--Ccccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEeccccCCHHHHHHHHHhhccccCCCCCCCCCCCCCCCC--
Confidence 9974 8999997 999999999999999999999999999999876410 00 011111
Q ss_pred cccccccceEEEEEeecccccccchhhc-cceeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhc
Q 010144 268 SNILFRSGGCSMLLTNNRALKHKAILKL-NCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVL 346 (517)
Q Consensus 268 ~~~lfGDGAAAvLLs~~~~~~~~~~~~l-~~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~l 346 (517)
..+++||||+|+||++.+.... .+-++ ..+..+...+|+.. +..| + +
T Consensus 231 ~G~~~geGAaavvL~~~~~A~~-~g~~i~a~i~g~~~~~dg~~---~~~p-------------~-----~---------- 278 (412)
T 4ewg_A 231 DGLVVGEGAATLVLEEYEHAKA-RGATIHAEIVGFGCNSDGAH---MTQP-------------T-----A---------- 278 (412)
T ss_dssp CCBCBBCEEEEEEEEEHHHHHH-TTCCCCEEEEEEEEEECSSC---SSSC-------------C-----H----------
T ss_pred CCCceECeEEEEEEccHHHHhh-CCCcEEEEEEEEEEcCCCCC---CCCC-------------C-----H----------
Confidence 2578999999999998543211 01111 11223333333321 1100 0 0
Q ss_pred ccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHHHHH-----HhhCCCCcccchh
Q 010144 347 VPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGT-----GKGLELDEYDLEP 421 (517)
Q Consensus 347 gpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il~~i-----~~~Lgl~~e~~~~ 421 (517)
....+.+++++ +++|++| +|||++..|..+...-|.+ .+.++-.. .+
T Consensus 279 ---------------~~~~~ai~~Al-------~~Agl~~---~dId~ve~Hgtgt~~~D~~E~~al~~~~~~~~-~v-- 330 (412)
T 4ewg_A 279 ---------------STMARAMQLAL-------EDAKLDA---NAIAYVNAHGTSTDRGDVAESQATARTFGERM-PI-- 330 (412)
T ss_dssp ---------------HHHHHHHHHHH-------HHTTCCG---GGEEEEECCCCCCHHHHHHHHHHHHHHHCTTC-EE--
T ss_pred ---------------HHHHHHHHHHH-------HHcCCCH---HHCCEEEccCCCCccccHHHHHHHHHHcCCCC-ee--
Confidence 01223445555 6899996 9999999998887765543 34444210 11
Q ss_pred hhhcccCcccchhhHHHHHHHH---HHHcCCC-------------------------CCCCEEEEEEechhHHhheeeeE
Q 010144 422 ARMALHRFGNTSAGGLWYVLGY---MEAKKRL-------------------------KKGDRILMISLGAGFKCNNCVWE 473 (517)
Q Consensus 422 S~~~l~~~GNtsSASi~~~L~~---~~~~g~i-------------------------~~Gd~VlliafG~G~t~~a~vlr 473 (517)
-.+-..+||+.+|+=...+.. .++++.+ .+.++++.-+||.|.+..+++++
T Consensus 331 -~s~K~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~~~~v~~~~~~~~~~~~~~~sfgfGG~na~~vl~ 409 (412)
T 4ewg_A 331 -SSLKSYVGHTLGACGALEAWWTIEMMKRNWYAPTLNLTEVDPACAPLDYIRGEARAIDAEYVMSNNFAFGGINTSLIFR 409 (412)
T ss_dssp -ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTSCCCEECCSSCEECCCSEEEEEEEEGGGEEEEEEEE
T ss_pred -eCccccccccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCcccccccccCcccCCCCCEEEEeeecCCcceEEEEEe
Confidence 123344688888875554432 2333211 23567899999999998888887
Q ss_pred E
Q 010144 474 V 474 (517)
Q Consensus 474 ~ 474 (517)
.
T Consensus 410 ~ 410 (412)
T 4ewg_A 410 R 410 (412)
T ss_dssp C
T ss_pred e
Confidence 4
|
| >3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.70 E-value=2.1e-16 Score=166.92 Aligned_cols=94 Identities=18% Similarity=0.237 Sum_probs=77.7
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCCcCEEEEeec-CCC-CCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHH
Q 010144 161 MDEIIFDTLDKLFAR-TDISPSEIDVLVVNVS-LFS-PAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLF 237 (517)
Q Consensus 161 a~~la~~Aa~~aL~~-agi~p~dID~LI~a~s-~~~-~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL 237 (517)
..+|+.+|++++|++ +|++|+|||.+++++. ++. ..|.++.+++.++|++.++++++++. +|+|++.||.+|.++|
T Consensus 32 ~~~L~~~A~~~AL~~~AGl~~~dId~vi~g~~~~~~~~~~~~a~~va~~lGlp~~~pa~~v~~-~Css~~~Al~~A~~~I 110 (407)
T 3svk_A 32 PLNLVVGLVDELRRRYPDLDETLISDMILGVVSPVGDQGGDIARTAVLAAGLPETTGGVQLNR-FCASGLEAVNTAAQKV 110 (407)
T ss_dssp HHHHHHHHHHHHHHHSTTCCGGGEEEEEEECC--------CHHHHHHHHTTCCTTCEEEEEC----CBSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcCcCHHHCCEEEEEecCccccccCcHHHHHHHHcCCCCCCceEEecC-cChhHHHHHHHHHHHH
Confidence 356789999999999 9999999999999864 443 36889999999999966899999997 9999999999999999
Q ss_pred HcCCCCEEEEEEecCCCC
Q 010144 238 RTYKNKLAIVVSTESMGP 255 (517)
Q Consensus 238 ~ag~~~~aLVVs~E~~s~ 255 (517)
++|..+.+||+++|.+|.
T Consensus 111 ~sG~~d~vLv~G~e~~s~ 128 (407)
T 3svk_A 111 RSGWDDLVLAGGVESMSR 128 (407)
T ss_dssp HHTSCCEEEEEEEECC--
T ss_pred HcCCCCEEEEEEEccccc
Confidence 999999999999999874
|
| >4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=1.6e-15 Score=162.01 Aligned_cols=318 Identities=9% Similarity=-0.011 Sum_probs=192.2
Q ss_pred CceEEEEEEEEeCCCCCceecHHHHHHHHHhcc-cCChHHHHHHHHHHHHhCCceeEe--ccCC----CcCCCCC---Cc
Q 010144 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNK-KLGLEEYRFLLKNMVSSGIGEETY--GPRN----VVEGREE---SP 152 (517)
Q Consensus 83 ~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~-~~~~~~~~~~~ri~~~sGI~~r~~--~~~~----~~~~~~~---~~ 152 (517)
++|.|+|+|+..|.. .+.+++.+.+..-. .+.+-. + +...++..+.. ++.. ....++. .+
T Consensus 24 ~~v~ItG~g~~~P~g----~~~~~~w~~l~~g~s~i~~~~-~-----~~~~~~~~~~~g~v~~~~~~~~~~fd~~~~i~~ 93 (451)
T 4ddo_A 24 LRVVVTGIGIVSPLG----CGKELVWQRLIGGGSGLRRLG-D-----DIAGELSAKVGGTVQDVAEDPEGGFDPERSVPH 93 (451)
T ss_dssp CCEEEEEEEEEETTE----ESHHHHHHHHHTTCCCEEECC-H-----HHHTTSSCCEEECCCCTTTCTTTCCCGGGTSCH
T ss_pred CCEEEEEeEEECCCC----CCHHHHHHHHHcCCCeeeeCC-c-----cccccccCccceEccccccccccccchhhhCCH
Confidence 479999999999998 78999998774321 000000 0 11223322211 1100 0000000 01
Q ss_pred cHHHhHhhHHHHHHHHHHHHHHhCCCCCCCc-C----EEEEeecC---------------------------CCCCCcHH
Q 010144 153 SLAEAFSEMDEIIFDTLDKLFARTDISPSEI-D----VLVVNVSL---------------------------FSPAPSLT 200 (517)
Q Consensus 153 ~m~~~~~ea~~la~~Aa~~aL~~agi~p~dI-D----~LI~a~s~---------------------------~~~~Ps~a 200 (517)
...+..+...+|+.+|+++||+++|+++++| | .++++++. ....+..+
T Consensus 94 ~~~~~~d~~~~L~l~Aa~~AL~dAGl~~~~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 173 (451)
T 4ddo_A 94 KELRKMDRFIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAA 173 (451)
T ss_dssp HHHTTSCHHHHHHHHHHHHHHHHHTCCCCSHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHHH
T ss_pred HHHhhCCHHHHHHHHHHHHHHHHcCCChhhcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchHH
Confidence 1111223457899999999999999999999 7 56666431 12345678
Q ss_pred HHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCCC-----------------------
Q 010144 201 SRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNW----------------------- 257 (517)
Q Consensus 201 ~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~~----------------------- 257 (517)
.+|+..||+++ ++++++. +|++++.||..|.++|++|..+.|||+++|..+...
T Consensus 174 ~~ia~~lgl~G--p~~~v~~-aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~ 250 (451)
T 4ddo_A 174 GQISIKHRFRG--PLGCPVT-ACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKVSLGGFAAARALSTGFSEEPVRAS 250 (451)
T ss_dssp HHHHHHHTCCS--CEECCCC-GGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGGSC
T ss_pred HHHHHHhcCCC--ceeeecC-ccHHHHHHHHHHHHHHHCCCCCEEEEeccccccCHHHHHHHHHHhhhccCCCcCccccc
Confidence 99999999974 8999997 999999999999999999999999999999865210
Q ss_pred CCC-CCccccccccccccceEEEEEeecccccccchhhcc-ceeeeeeccCcccccceeeccccCCCCCcccchhHHHHH
Q 010144 258 YCG-REKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLN-CLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAA 335 (517)
Q Consensus 258 ~~~-~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~-~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~ 335 (517)
.+. .+++ .+++||||+|+||++.+.... .+-++. .+..+...+|+.. +..+. |.
T Consensus 251 ~pfd~~~~----g~v~gdGAaavvL~~~~~A~~-~g~~i~a~i~g~~~~~d~~~---~~~~~--------------~~-- 306 (451)
T 4ddo_A 251 RPFDRDRD----GFVMGEGAAMVVVESLDHALA-RGARPIAEIIGYGTTADAYH---MTAGP--------------DD-- 306 (451)
T ss_dssp CTTBTTCC----SBCBBCEEEEEEEEEHHHHHH-TTCCCSEEEEEEEEEECCSC---SSCCC--------------TT--
T ss_pred cccccCCC----CcEEeceEEEEEEeeHHHHHh-CCCceEEEEEEEEEecCCCc---cCCCC--------------CC--
Confidence 000 1222 678999999999998543211 011111 1233333334321 11000 00
Q ss_pred HHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHHHH-----HHh
Q 010144 336 ALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDG-----TGK 410 (517)
Q Consensus 336 ~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il~~-----i~~ 410 (517)
+ . ...+.+++++ +++|++| +|||++.+|..+..+-|. +.+
T Consensus 307 ~-----------------~--------~~~~ai~~al-------~~Agl~~---~dId~ve~Hgtgt~~~d~~E~~al~~ 351 (451)
T 4ddo_A 307 G-----------------S--------GAMRAMKLAL-------RMGDVAP---EQVDYVNAHATSTPVGDAGEIEALKT 351 (451)
T ss_dssp C-----------------H--------HHHHHHHHHH-------HHHTCCG---GGCCEEECCCCSCHHHHHHHHHHHHH
T ss_pred H-----------------H--------HHHHHHHHHH-------HHcCCCH---HHcCEEEecCCcCcccCHHHHHHHHH
Confidence 0 0 0223344555 6889996 999999999877665543 334
Q ss_pred hCCCCcccchhhhhcccCcccchhhHHHHHHHH---HHHcCCC-------------------------CCCCEEEEEEec
Q 010144 411 GLELDEYDLEPARMALHRFGNTSAGGLWYVLGY---MEAKKRL-------------------------KKGDRILMISLG 462 (517)
Q Consensus 411 ~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~---~~~~g~i-------------------------~~Gd~VlliafG 462 (517)
.++. ...+.- ..+-..+||+.+|+=...+.. .++++.+ .+..+++.-+||
T Consensus 352 ~~~~-~~~~~v-~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~sfg 429 (451)
T 4ddo_A 352 VFGV-GAGPAI-SSTKSATGHLLGAAGAIEAAFSILALRDGVLPGTLNLEHPDPAADGLDLIGPAARHVPVEIALSNGFG 429 (451)
T ss_dssp HHCS-SSSCEE-ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGGTTSEECCSSCEECCCSEEEEEEEE
T ss_pred HhCC-CCCCcc-cCchhhhccCHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCcccccccccCCCCCCCCcCEEEEeeEc
Confidence 4443 112210 122345688887775555443 3333311 134567888999
Q ss_pred hhHHhheeeeEE
Q 010144 463 AGFKCNNCVWEV 474 (517)
Q Consensus 463 ~G~t~~a~vlr~ 474 (517)
.|-+-.+++++-
T Consensus 430 fgG~na~~vl~~ 441 (451)
T 4ddo_A 430 FGGVNASVLFRR 441 (451)
T ss_dssp TTTEEEEEEEEE
T ss_pred CCCceEEEEEee
Confidence 999888888875
|
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.1e-15 Score=160.11 Aligned_cols=93 Identities=14% Similarity=0.217 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHHhC-CCCCCCcCEEEEeec-CCCC-CCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHH
Q 010144 162 DEIIFDTLDKLFART-DISPSEIDVLVVNVS-LFSP-APSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (517)
Q Consensus 162 ~~la~~Aa~~aL~~a-gi~p~dID~LI~a~s-~~~~-~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ 238 (517)
.+|+.+|++++|+++ |++|+|||.+++++. ++.. .|..+.+++..+|++.++++++++. +|+|++.||.+|.++|+
T Consensus 28 ~~L~~~a~~~Al~~a~gi~~~~Id~v~~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v~~-aCss~l~Al~~A~~~I~ 106 (387)
T 3goa_A 28 EDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPHSVPAVTVNR-LCGSSMQALHDAARMIM 106 (387)
T ss_dssp HHHHHHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTTTHHHHHHHHTTCCTTSCCEEEEC-GGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCHHHcCEEEEEcccCCcccccHHHHHHHHHcCCCCCCcEeEecC-cchHHHHHHHHHHHHHh
Confidence 467899999999999 999999999999754 5544 7889999999999976799999997 99999999999999999
Q ss_pred cCCCCEEEEEEecCCCC
Q 010144 239 TYKNKLAIVVSTESMGP 255 (517)
Q Consensus 239 ag~~~~aLVVs~E~~s~ 255 (517)
+|..+++||+++|.+|.
T Consensus 107 sG~~d~vLv~G~e~~s~ 123 (387)
T 3goa_A 107 TGDAQVCLVGGVEHMGH 123 (387)
T ss_dssp TTSCSEEEEEEEECTTT
T ss_pred CCCCCEEEEEEEecCCC
Confidence 99999999999998875
|
| >2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A | Back alignment and structure |
|---|
Probab=99.67 E-value=5.7e-15 Score=156.89 Aligned_cols=253 Identities=9% Similarity=0.008 Sum_probs=162.8
Q ss_pred hHHHHHHHHHHHHHHhCCC-CCCCcC----EEEEeec-CC-----------------CCC---------CcHHHHHHHHc
Q 010144 160 EMDEIIFDTLDKLFARTDI-SPSEID----VLVVNVS-LF-----------------SPA---------PSLTSRIINRY 207 (517)
Q Consensus 160 ea~~la~~Aa~~aL~~agi-~p~dID----~LI~a~s-~~-----------------~~~---------Ps~a~~I~~~L 207 (517)
...+|+.+|+++||+++|+ ++++|| .|+++++ .+ ... ..++.+|+.+|
T Consensus 87 ~~~~l~l~aa~~AL~dAG~~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~l 166 (431)
T 2ix4_A 87 NFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKY 166 (431)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCccccCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchhHHHHHHHHHHH
Confidence 4468999999999999999 988887 4666543 21 111 25789999999
Q ss_pred CCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCCC----------CC------------CCCccc
Q 010144 208 NLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNW----------YC------------GREKSM 265 (517)
Q Consensus 208 Gl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~~----------~~------------~~dr~~ 265 (517)
|+++ ++++++. +|+|++.||.+|.++|++|..+.+||+++|.++... .. +-|..
T Consensus 167 gl~g--p~~~v~t-aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~- 242 (431)
T 2ix4_A 167 GFQG--PNHAAVT-ACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCD- 242 (431)
T ss_dssp TCCS--CEECBCC-GGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGGSCCTTBTT-
T ss_pred CCCC--ceeCccC-hhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccccCccccCCcccccccCCCC-
Confidence 9974 8999997 999999999999999999999999999999765310 00 00110
Q ss_pred cccccccccceEEEEEeecccccccchhhc-cceeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhh
Q 010144 266 MLSNILFRSGGCSMLLTNNRALKHKAILKL-NCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQ 344 (517)
Q Consensus 266 lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l-~~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~ 344 (517)
-..+++||||+|+||++.+...+ .+.++ ..+..+...+|+.. +..+. . + +
T Consensus 243 -~~g~~~gdGAaavvL~~~~~A~~-~g~~i~a~i~g~~~~~dg~~---~~~p~---------~--~-----~-------- 293 (431)
T 2ix4_A 243 -RDGFVIGEGSGVIVLEEYEHAKR-RGAKIYAELCGYGMSGDAHH---ITQPP---------E--D-----G-------- 293 (431)
T ss_dssp -CCSBCBBCEEEEEEEEEHHHHHH-TTCCCCEEEEEEEEEECCSC---SSCCC---------T--T-----C--------
T ss_pred -CCCceeecceEEEEEccHHHHHh-CCCceEEEEeeeeecCCCCC---CCCCC---------C--C-----H--------
Confidence 12579999999999997643211 01111 12333334444421 11110 0 0 0
Q ss_pred hcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHHHH-----HHhhCCCCc--c
Q 010144 345 VLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDG-----TGKGLELDE--Y 417 (517)
Q Consensus 345 ~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il~~-----i~~~Lgl~~--e 417 (517)
. ...+.+++++ +++|++| +|||++.+|..+..+-|. +.+.++... +
T Consensus 294 ---------~--------~~~~ai~~al-------~~agl~~---~dId~ve~HgtgT~~~D~~E~~al~~~~~~~~~~~ 346 (431)
T 2ix4_A 294 ---------K--------GAVLAMTRAL-------RQSGLCP---NQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSG 346 (431)
T ss_dssp ---------H--------HHHHHHHHHH-------HHHTCCG---GGCCEEECCCCSCHHHHHHHHHHHHHHHTHHHHTS
T ss_pred ---------H--------HHHHHHHHHH-------HHcCCCH---HHcCEEEEeCCcCcccCHHHHHHHHHHHcccccCC
Confidence 0 1223445555 6889996 899999999887665443 333443221 2
Q ss_pred cchhhhhcccCcccchhhHHHHHHHHH---HHcCCC----------------------C---CCCEEEEEEechhHHhhe
Q 010144 418 DLEPARMALHRFGNTSAGGLWYVLGYM---EAKKRL----------------------K---KGDRILMISLGAGFKCNN 469 (517)
Q Consensus 418 ~~~~S~~~l~~~GNtsSASi~~~L~~~---~~~g~i----------------------~---~Gd~VlliafG~G~t~~a 469 (517)
++.. -.....+||+.+|+-...+... ++.+.+ + +..+++.-+||.|-+-.+
T Consensus 347 ~~~v-~s~k~~~GH~~gAsG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~~a~~~sfGfGG~na~ 425 (431)
T 2ix4_A 347 TLAF-SSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNAS 425 (431)
T ss_dssp CSEE-ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCTTCCSSSCCCSSCEECCCSEEEEEEEETTTEEEE
T ss_pred Ccee-ecchhhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcccCCccccccCCCCEEEEecccCCCeeEE
Confidence 3311 1234578999998876666543 333321 0 345778889999988777
Q ss_pred eeeE
Q 010144 470 CVWE 473 (517)
Q Consensus 470 ~vlr 473 (517)
++++
T Consensus 426 ~il~ 429 (431)
T 2ix4_A 426 LLFA 429 (431)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7775
|
| >2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.2e-14 Score=153.63 Aligned_cols=317 Identities=12% Similarity=0.016 Sum_probs=189.7
Q ss_pred CCCceEEEEEEEEeCCCCCceecHHHHHHHHHhcc-cCChHHHHHHHHHHHHhCCceeE--eccCCCcCCCCC--CccHH
Q 010144 81 RGQCCYMLAYECYKPCDETRRLDTESCARVVWRNK-KLGLEEYRFLLKNMVSSGIGEET--YGPRNVVEGREE--SPSLA 155 (517)
Q Consensus 81 ~~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~-~~~~~~~~~~~ri~~~sGI~~r~--~~~~~~~~~~~~--~~~m~ 155 (517)
..++|.|+|+|+..|.. .+.+++.+.+..-. ...+-. +|- .+..++..+. +++++ ++. .+.-+
T Consensus 10 ~~~~vaI~G~g~~~p~g----~~~~~~w~~l~~g~~~i~~~~-~~~---~~~~~~~~~~~~~~~~d----~~~~~~~~~~ 77 (416)
T 2wge_A 10 GFPSVVVTAVTATTSIS----PDIESTWKGLLAGESGIHALE-DEF---VTKWDLAVKIGGHLKDP----VDSHMGRLDM 77 (416)
T ss_dssp SSCCEEEEEEEEEESSC----SSHHHHHHHHHTTCCCCEECC-CHH---HHHHTCSCCEEBCCSSC----GGGGCCHHHH
T ss_pred CCCcEEEEeeEEECCCC----CCHHHHHHHHHcCCCEEEeCC-ccc---cccccCCccEEEEeCCc----hhhhCCHHHH
Confidence 34579999999999998 78899998774321 010000 110 0012332221 11110 000 01111
Q ss_pred HhHhhHHHHHHHHHHHHHHhCCCC---CCCcCEEEEee-cCCC-----------------CCC---------cHHHHHHH
Q 010144 156 EAFSEMDEIIFDTLDKLFARTDIS---PSEIDVLVVNV-SLFS-----------------PAP---------SLTSRIIN 205 (517)
Q Consensus 156 ~~~~ea~~la~~Aa~~aL~~agi~---p~dID~LI~a~-s~~~-----------------~~P---------s~a~~I~~ 205 (517)
+......+|+.+|+++||+++|++ +++|+ |++++ +.++ ..| ..+.+|+.
T Consensus 78 ~~~d~~~~l~l~aa~~AL~dAG~~~~~~~~~g-v~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~ 156 (416)
T 2wge_A 78 RRMSYVQRMGKLLGGQLWESAGSPEVDPDRFA-VVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGL 156 (416)
T ss_dssp HHSCHHHHHHHHHHHHHHHHTTCCCCCGGGEE-EEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHHHHcCCCccCCCceE-EEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHHHHHHH
Confidence 222345789999999999999982 23344 55543 3332 122 56899999
Q ss_pred HcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCC----------CCC-----------CCCcc
Q 010144 206 RYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN----------WYC-----------GREKS 264 (517)
Q Consensus 206 ~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~----------~~~-----------~~dr~ 264 (517)
.||++ .+++++.. +|++++.||.+|.++|++|..+.+||+++|.++.. ... +-|+.
T Consensus 157 ~lgl~--gp~~~v~~-aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~pfd~~ 233 (416)
T 2wge_A 157 QLGAR--AGVMTPVS-ACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTRNDEPERASRPFDKD 233 (416)
T ss_dssp HHTCC--SCEECCCC-GGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCCHHHHHHHHTTTCBCCCTTSGGGSCCTTBTT
T ss_pred HhccC--CCcccccC-chHHHHHHHHHHHHHHHcCCCCEEEEeeecCccchHHHHHHHhcchhhccccCCcccccccccC
Confidence 99996 48999997 99999999999999999999999999999987642 011 00111
Q ss_pred ccccccccccceEEEEEeecccccccchhhc-cceeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhh
Q 010144 265 MMLSNILFRSGGCSMLLTNNRALKHKAILKL-NCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNL 343 (517)
Q Consensus 265 ~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l-~~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i 343 (517)
-..++|||||+|+||++.+.... .+.++ ..+..+...+|+.. +..|. . . +
T Consensus 234 --~dg~v~geGaaavvL~~~~~A~~-~g~~~~a~i~g~~~~~dg~~---~~~p~---------~--~-----~------- 284 (416)
T 2wge_A 234 --RDGFVFGEAGALMLIETEEHAKA-RGAKPLARLLGAGITSDAFH---MVAPA---------A--D-----G------- 284 (416)
T ss_dssp --CCCBCBBCEEEEEEEEEHHHHHH-TTCCCSEEEEEEEEEECCSC---SSSCC---------T--T-----C-------
T ss_pred --CCCccccCceEEEEECcHHHHHH-CCCceEEEEEEEEEecCCCC---ccCCC---------C--C-----h-------
Confidence 12689999999999997643211 01111 12233333344321 11110 0 0 0
Q ss_pred hhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHHHHHH----hhCCCCcccc
Q 010144 344 QVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTG----KGLELDEYDL 419 (517)
Q Consensus 344 ~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il~~i~----~~Lgl~~e~~ 419 (517)
. ...+.+++++ +++|++| +|||++.+|..+..+-|.++ +.++.. ++
T Consensus 285 ----------~--------~~~~ai~~al-------~~agl~~---~dId~ve~HgtgT~~gD~~E~~al~~~~~~--~~ 334 (416)
T 2wge_A 285 ----------V--------RAGRAMTRSL-------ELAGLSP---ADIDHVNAHGTATPIGDAAEANAIRVAGCD--QA 334 (416)
T ss_dssp ----------H--------HHHHHHHHHH-------HHHTCCG---GGCCEEECCCCCCHHHHHHHHHHHHHTTCT--TS
T ss_pred ----------H--------HHHHHHHHHH-------HHcCCCH---HHCCEEEECCCCCcCCCHHHHHHHHHhccC--CC
Confidence 0 1223445555 6889996 89999999988776655442 234432 22
Q ss_pred hhhhhcccCcccchhhHHHHHHHHH---HHcCCC------------------------CCCCEEEEEEechhHHhheeee
Q 010144 420 EPARMALHRFGNTSAGGLWYVLGYM---EAKKRL------------------------KKGDRILMISLGAGFKCNNCVW 472 (517)
Q Consensus 420 ~~S~~~l~~~GNtsSASi~~~L~~~---~~~g~i------------------------~~Gd~VlliafG~G~t~~a~vl 472 (517)
.. ...-..+||+.+|+-...+... ++.+.+ .+..+++.-+||.|-+-.++++
T Consensus 335 ~v-~s~k~~~GH~~gAsG~~~~i~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl 413 (416)
T 2wge_A 335 AV-YAPKSALGHSIGAVGALESVLTVLTLRDGVIPPTLNYETPDPEIDLDVVAGEPRYGDYRYAVNNSFGFGGHNVALAF 413 (416)
T ss_dssp EE-ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTTCCEECCSSCEECCCCEEEEEEEETTTEEEEEEE
T ss_pred Cc-cCCcccccCcHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcccCCCCCccCCCCEEEEeCcccCceeEEEEE
Confidence 11 2345678999988877765443 333321 1235678889999988777777
Q ss_pred E
Q 010144 473 E 473 (517)
Q Consensus 473 r 473 (517)
+
T Consensus 414 ~ 414 (416)
T 2wge_A 414 G 414 (416)
T ss_dssp E
T ss_pred E
Confidence 5
|
| >1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.66 E-value=4.4e-15 Score=156.27 Aligned_cols=94 Identities=14% Similarity=0.196 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCC-CCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHH
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSP-APSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s-~~~~-~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ 238 (517)
..+|+.+|+++||+++|++|++||.|+++++ +++. .|..+.+|+.+||++++.++++++. +|++++.||.+|.++|+
T Consensus 26 ~~~L~~~Aa~~Al~dAgl~~~~id~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~-aCas~~~Al~~A~~~I~ 104 (401)
T 1ulq_A 26 PDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEVAGCTVNR-LCGSGLEAVAQAARAIW 104 (401)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTCEEEEEEC-GGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCChHHHHHHHHhCCCCCccEeeccc-cchHHHHHHHHHHHHHH
Confidence 3466899999999999999999999998754 4444 6889999999999975789999997 99999999999999999
Q ss_pred cCCCCEEEEEEecCCCC
Q 010144 239 TYKNKLAIVVSTESMGP 255 (517)
Q Consensus 239 ag~~~~aLVVs~E~~s~ 255 (517)
+|..+.+||+++|.++.
T Consensus 105 ~G~~d~vLv~G~e~~s~ 121 (401)
T 1ulq_A 105 AGEGKVYIGSGVESMSR 121 (401)
T ss_dssp TTSCSEEEEEEEEESSS
T ss_pred CCCCCEEEEEEEeecCC
Confidence 99999999999998764
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... | Back alignment and structure |
|---|
Probab=99.66 E-value=2.6e-15 Score=157.54 Aligned_cols=94 Identities=14% Similarity=0.207 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHc
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~a 239 (517)
..+|+.+|++++|+++|+++++||.+++++. +....+..+.+|+.++|+++..++++++. +|++++.||..|.+.|++
T Consensus 27 ~~~L~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~ia~~lgl~~~~p~~~v~~-aCaSgl~Al~~A~~~I~~ 105 (392)
T 2vu1_A 27 AHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEATAWGMNQ-LCGSGLRAVALGMQQIAT 105 (392)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSEEEEEEC-GGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHHcCCCCCceEEEecc-cchHHHHHHHHHHHHHHC
Confidence 3567899999999999999999999998754 44446789999999999985589999997 999999999999999999
Q ss_pred CCCCEEEEEEecCCCC
Q 010144 240 YKNKLAIVVSTESMGP 255 (517)
Q Consensus 240 g~~~~aLVVs~E~~s~ 255 (517)
|..+.+||+++|.++.
T Consensus 106 G~~d~vlvgG~e~~s~ 121 (392)
T 2vu1_A 106 GDASIIVAGGMESMSM 121 (392)
T ss_dssp TSCSCEEEEEEEESTT
T ss_pred CCCCEEEEEEEeccCC
Confidence 9999999999998764
|
| >1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A | Back alignment and structure |
|---|
Probab=99.65 E-value=4.9e-15 Score=155.72 Aligned_cols=93 Identities=11% Similarity=0.167 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcC
Q 010144 162 DEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTY 240 (517)
Q Consensus 162 ~~la~~Aa~~aL~~agi~p~dID~LI~a~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag 240 (517)
.+|+.+|+++||+++|+++++||.++++++ +++..|..+.+|+.++|++...++++++. +|++++.||..|.++|++|
T Consensus 31 ~~L~~~a~~~Al~dAGl~~~~id~v~~g~~~~~~~~~~~a~~ia~~lgl~~~~p~~~v~~-aCaSg~~Ai~~A~~~I~~G 109 (397)
T 1wl4_A 31 QDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAGCGQNPVRQASVGAGIPYSVPAWSCQM-ICGSGLKAVCLAVQSIGIG 109 (397)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSCEEEECC-GGGHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHHcCCCCCccEEEecC-cChhHHHHHHHHHHHHHCC
Confidence 466899999999999999999999988754 44556889999999999965789999997 9999999999999999999
Q ss_pred CCCEEEEEEecCCCC
Q 010144 241 KNKLAIVVSTESMGP 255 (517)
Q Consensus 241 ~~~~aLVVs~E~~s~ 255 (517)
..+.+|++++|.++.
T Consensus 110 ~~d~vlagG~e~~s~ 124 (397)
T 1wl4_A 110 DSSIVVAGGMENMSK 124 (397)
T ss_dssp SCSEEEEEEEEESTT
T ss_pred CCCEEEEEEEeecCC
Confidence 999999999998763
|
| >1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* | Back alignment and structure |
|---|
Probab=99.62 E-value=1.2e-14 Score=152.34 Aligned_cols=94 Identities=16% Similarity=0.204 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHHhC-CCCCCCcCEEEEeec-CCCC-CCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHH
Q 010144 161 MDEIIFDTLDKLFART-DISPSEIDVLVVNVS-LFSP-APSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLF 237 (517)
Q Consensus 161 a~~la~~Aa~~aL~~a-gi~p~dID~LI~a~s-~~~~-~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL 237 (517)
..+|+.+|++++|+++ |+++++||.++++++ +++. .+..+.+|+.++|++++.++++++. +|++++.||.+|.++|
T Consensus 30 ~~~L~~~a~~~AL~dA~gl~~~~id~v~~g~~~~~~~~~~~~a~~ia~~lgl~~~~p~~~v~~-aCaS~~~Al~~A~~~I 108 (390)
T 1wdk_C 30 AEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSR-LCGSSMSALHTAAQAI 108 (390)
T ss_dssp HHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSSCTTSEEEEEEC-GGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeeccccCCCCcHHHHHHHHcCCCCCccEEEEcc-cchhHHHHHHHHHHHH
Confidence 3567899999999999 999999999998754 3332 3788999999999976789999997 9999999999999999
Q ss_pred HcCCCCEEEEEEecCCCC
Q 010144 238 RTYKNKLAIVVSTESMGP 255 (517)
Q Consensus 238 ~ag~~~~aLVVs~E~~s~ 255 (517)
++|..+.+||+++|.++.
T Consensus 109 ~~G~~d~vlvgG~e~~s~ 126 (390)
T 1wdk_C 109 MTGNGDVFVVGGVEHMGH 126 (390)
T ss_dssp HTTSCSEEEEEEEEETTT
T ss_pred HcCCCCEEEEeeeecccc
Confidence 999999999999998754
|
| >2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... | Back alignment and structure |
|---|
Probab=99.62 E-value=2.8e-14 Score=150.38 Aligned_cols=313 Identities=9% Similarity=0.088 Sum_probs=189.2
Q ss_pred CceEEEEEEEEeCCCCCceecHHHHHHHHHhcc-cCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCC-CccHHHhHhh
Q 010144 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNK-KLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREE-SPSLAEAFSE 160 (517)
Q Consensus 83 ~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~-~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~-~~~m~~~~~e 160 (517)
++|+|+|+|+..|.. .+.+++.+.+..-. .+.+-. + +...++..+....-. +....- .+.-.+....
T Consensus 2 ~~v~ItG~g~~~p~g----~~~~~~w~~l~~g~~~i~~~~-~-----~~~~~~~~~~~~~v~-fd~~~~~~~~~~~~~d~ 70 (406)
T 2vba_A 2 KRAVITGLGIVSSIG----NNQQEVLASLREGRSGITFSQ-E-----LKDSGMRSHVWGNVK-LDTTGLIDRKVVRFMSD 70 (406)
T ss_dssp CCEEEEEEEEEBTTB----SSHHHHHHHHHHTCCCEEECH-H-----HHHTTCSCCEEECCC-CCCTTSSCHHHHTTCCH
T ss_pred CCEEEEeeEEECCCC----CCHHHHHHHHHcCCCeEEeCC-c-----ccccCCccceEEEec-CChhhcCCHHHHHhcCH
Confidence 369999999999997 78889888764311 111100 1 122233322211000 110000 0111112234
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCE-----EEEeec-CCC---------------------------CCCcHHHHHHHHc
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDV-----LVVNVS-LFS---------------------------PAPSLTSRIINRY 207 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~-----LI~a~s-~~~---------------------------~~Ps~a~~I~~~L 207 (517)
..+|+.+|+++||+++|+++++||. |+++++ .++ ..+.++.+|+..|
T Consensus 71 ~~~l~l~aa~~Al~dAg~~~~~i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l 150 (406)
T 2vba_A 71 ASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPF 150 (406)
T ss_dssp HHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHCCCChhHcCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHHHHHHhc
Confidence 5789999999999999999888874 777653 221 1235789999999
Q ss_pred CCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCCC---------C------------CCCCcccc
Q 010144 208 NLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNW---------Y------------CGREKSMM 266 (517)
Q Consensus 208 Gl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~~---------~------------~~~dr~~l 266 (517)
|+++ +++.+.. +|++++.||.+|.++|++|..+.+||+++|.++..+ . .+-|+..
T Consensus 151 gl~G--p~~~v~t-aCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~~~~~~ls~~~~~~p~~~~~pfd~~~- 226 (406)
T 2vba_A 151 KIHG--VNYSISS-ACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTYDAHR- 226 (406)
T ss_dssp TCCS--CEEEEEC-GGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHHTTCBCCSCTTSGGGSCCTTBTTC-
T ss_pred cCCC--ceeeecc-chhHHHHHHHHHHHHHHcCCCCEEEEeeeccccChHHHHHhhccccccccCCCCccccCcCcCCC-
Confidence 9974 8999997 999999999999999999999999999999864310 0 0011111
Q ss_pred ccccccccceEEEEEeecccccccchhhc-cceeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhh
Q 010144 267 LSNILFRSGGCSMLLTNNRALKHKAILKL-NCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQV 345 (517)
Q Consensus 267 v~~~lfGDGAAAvLLs~~~~~~~~~~~~l-~~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~ 345 (517)
..+++||||+|+||++.+...++ +-++ ..+..+...+|+.. +..| . +
T Consensus 227 -~G~v~gEGaaavvL~~~~~A~~~-g~~i~a~I~g~~~~~dg~~---~t~p----------------~--~--------- 274 (406)
T 2vba_A 227 -DGFVIAGGGGMVVVEELEHALAR-GAHIYAEIVGYGATSDGAD---MVAP----------------S--G--------- 274 (406)
T ss_dssp -CSBCBBCEEEEEEEEEHHHHHHT-TCCCCEEEEEEEEEECCSC---TTSC----------------C--S---------
T ss_pred -CceEeeceEEEEEeCcHHHHHHC-CCeEEEEEEEEEEcCCCCC---CCCC----------------C--H---------
Confidence 26789999999999976432110 1111 11233333344321 1111 0 0
Q ss_pred cccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHHH-----HHHhhCCCCcccch
Q 010144 346 LVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVID-----GTGKGLELDEYDLE 420 (517)
Q Consensus 346 lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il~-----~i~~~Lgl~~e~~~ 420 (517)
. ...+.+++++ +++| +|||++..|..+...-| .+.+.+|-..-.+
T Consensus 275 --------~--------~~~~ai~~al-------~~ag------~dId~ve~HgtgT~~gD~~E~~al~~~fg~~~~~v- 324 (406)
T 2vba_A 275 --------E--------GAVRCMKMAM-------HGVD------TPIDYLNSHGTSTPVGDVKELAAIREVFGDKSPAI- 324 (406)
T ss_dssp --------H--------HHHHHHHHHH-------TTCC------SCCCEEECCCCSCHHHHHHHHHHHHHHHTTCCCEE-
T ss_pred --------H--------HHHHHHHHHH-------hhCC------CCccEEEeeCccCcccCHHHHHHHHHHhCcCCCce-
Confidence 0 0223344455 4565 58999999998876643 3455565432112
Q ss_pred hhhhcccCcccchhhHHHHHHHHH---HHcCCCC------------------------CCCEEEEEEechhHHhheeeeE
Q 010144 421 PARMALHRFGNTSAGGLWYVLGYM---EAKKRLK------------------------KGDRILMISLGAGFKCNNCVWE 473 (517)
Q Consensus 421 ~S~~~l~~~GNtsSASi~~~L~~~---~~~g~i~------------------------~Gd~VlliafG~G~t~~a~vlr 473 (517)
-.+-..+||+.+|+-.+.+... ++.+.+. +-.+++.-+||.|-+..+++++
T Consensus 325 --~s~K~~~GH~~gAaG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~sfGfgG~na~~vl~ 402 (406)
T 2vba_A 325 --SATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVTETTDRELTTVMSNSFGFGGTNATLVMR 402 (406)
T ss_dssp --ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTCTTSEECCSCEECCCCEEEEEEEETTTEEEEEEEE
T ss_pred --eCchhhhcccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCccccccCCcccCCCCCEEEEcCCCCCCeEEEEEEE
Confidence 1234568999999877766543 3343311 2256788899999888888876
Q ss_pred E
Q 010144 474 V 474 (517)
Q Consensus 474 ~ 474 (517)
-
T Consensus 403 ~ 403 (406)
T 2vba_A 403 K 403 (406)
T ss_dssp C
T ss_pred e
Confidence 4
|
| >3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=1e-14 Score=154.77 Aligned_cols=311 Identities=10% Similarity=0.064 Sum_probs=191.3
Q ss_pred CceEEEEEEEEeCCCCCceecHHHHHHHHHhcc-cCChHHHHHHHHHHHHhCCceeEeccCCCcC----CCCCCccHHHh
Q 010144 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNK-KLGLEEYRFLLKNMVSSGIGEETYGPRNVVE----GREESPSLAEA 157 (517)
Q Consensus 83 ~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~-~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~----~~~~~~~m~~~ 157 (517)
++|+|+|+|+..|.. .+.+++.+.+..-. .+.+-. + +...++..+...... +. .++ .....
T Consensus 23 ~~V~ItG~g~~~p~g----~~~~~~w~~l~~g~~~i~~~~-----~-~~~~~~~~~~~g~~~-fd~~~~i~~---~~~~~ 88 (428)
T 3mqd_A 23 RRVVVTGMGIVSSIG----SNTEEVTASLREAKSGISRAE-----E-YAELGFRCQVHGAPD-IDIESLVDR---RAMRF 88 (428)
T ss_dssp CCEEEEEEEEEBTTB----SSHHHHHHHHHHTCCCEEECH-----H-HHHTTCSCCEEECCC-CCHHHHSCT---GGGTT
T ss_pred CCEEEEeeEEECCCc----CCHHHHHHHHHcCCCcceeCC-----c-ccccCCCcccccccC-CChhhcCCH---HHHhh
Confidence 579999999999998 78999988764321 111100 0 123344433221111 00 000 11111
Q ss_pred HhhHHHHHHHHHHHHHHhCCCCCCCcC----EEEEeec-CCC--------------------------CCCcHHHHHHHH
Q 010144 158 FSEMDEIIFDTLDKLFARTDISPSEID----VLVVNVS-LFS--------------------------PAPSLTSRIINR 206 (517)
Q Consensus 158 ~~ea~~la~~Aa~~aL~~agi~p~dID----~LI~a~s-~~~--------------------------~~Ps~a~~I~~~ 206 (517)
.....+|+.+|+++||+++|+++++|| .++++++ .++ ..+.++.+|+..
T Consensus 89 ~d~~~~l~~~aa~~Al~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 168 (428)
T 3mqd_A 89 HGRGTAWNHIAMDQAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATF 168 (428)
T ss_dssp CCHHHHHHHHHHHHHHHHHTCCHHHHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHcCCChhHccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHHH
Confidence 234578999999999999999999998 5777653 221 134678999999
Q ss_pred cCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCCCC----------------------CCCCcc
Q 010144 207 YNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWY----------------------CGREKS 264 (517)
Q Consensus 207 LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~~~----------------------~~~dr~ 264 (517)
||++ .+++.++. +|+|++.||.+|.++|++|..+.+||+++|.++.... +..++.
T Consensus 169 lgl~--gp~~tv~~-aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~~s~~~~~~~~~~~~ls~~~~~~p~~~~rpfd~~~ 245 (428)
T 3mqd_A 169 FKIK--GINYSISS-ACATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDWTLSVLFDAMGAMSSKYNDTPSTASRAYDKNR 245 (428)
T ss_dssp TTCC--SCEECCCC-GGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHHTTCBCCTTTTSGGGSCCTTBTTC
T ss_pred cCCC--CceeeecC-ccHHHHHHHHHHHHHHHcCCCCEEEEEeecccchHHHHHHHHhhhhcccccCCcccccCcccCCC
Confidence 9997 39999997 9999999999999999999999999999998653100 011111
Q ss_pred ccccccccccceEEEEEeecccccccchhhc-cceeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhh
Q 010144 265 MMLSNILFRSGGCSMLLTNNRALKHKAILKL-NCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNL 343 (517)
Q Consensus 265 ~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l-~~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i 343 (517)
..+++||||+|+||++...... .+-++ ..+..+....|+.. +..|. +
T Consensus 246 ---~G~v~gEGAaavvL~~~~~A~~-~g~~i~a~I~g~~~~~dg~~---~~~P~---~---------------------- 293 (428)
T 3mqd_A 246 ---DGFVIAGGAGVLVLEDLETALA-RGAKIYGEIVGYGATSDGYD---MVAPS---G---------------------- 293 (428)
T ss_dssp ---CSBCBBCEEEEEEEEEHHHHHH-TTCCCCEEEEEEEEEECCSC---SSSCC---S----------------------
T ss_pred ---CCcccccceEEEEEccHHHHHh-CCCcEEEEEEEEEEcCCCCC---CCCCC---H----------------------
Confidence 2678999999999998643211 01111 11233333334321 11110 0
Q ss_pred hhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHHHH-----HHhhCCCCccc
Q 010144 344 QVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDG-----TGKGLELDEYD 418 (517)
Q Consensus 344 ~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il~~-----i~~~Lgl~~e~ 418 (517)
. ...+.+++++ + |++ +|||++-.|..+..+-|. +.+.++...+.
T Consensus 294 ----------~--------~~~~ai~~Al-------~--gl~----~dId~ve~HgtgT~~~D~~E~~al~~~~~~~~~~ 342 (428)
T 3mqd_A 294 ----------E--------GAIRCMKMAL-------S--TVT----SKIDYINPHATSTPAGDAPEIEAIRQIFGAGDVC 342 (428)
T ss_dssp ----------H--------HHHHHHHHHH-------T--TCC----SCCCEEECCCCSCHHHHHHHHHHHHHHHCSGGGS
T ss_pred ----------H--------HHHHHHHHHH-------h--CCc----cccCEEEEeCCCCCCcCHHHHHHHHHHhcccCCC
Confidence 0 1223455555 3 655 799999999887765554 34555533322
Q ss_pred chhhhhcccCcccchhhHHHHHHH---HHHHcCCC-------------------------CCCCEEEEEEechhHHhhee
Q 010144 419 LEPARMALHRFGNTSAGGLWYVLG---YMEAKKRL-------------------------KKGDRILMISLGAGFKCNNC 470 (517)
Q Consensus 419 ~~~S~~~l~~~GNtsSASi~~~L~---~~~~~g~i-------------------------~~Gd~VlliafG~G~t~~a~ 470 (517)
+. .-.+=..+||+-+|+=...+. ..++++.+ .+-.+++.-+||.|-+-.++
T Consensus 343 ~~-v~s~K~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~sfGfGG~Na~~ 421 (428)
T 3mqd_A 343 PP-IAATKSLTGHSLGATGVQEAIYSLLMMQNNFICESAHIEELDPAFADMPIVRKRIDNVQLNTVLSNSFGFGGTNATL 421 (428)
T ss_dssp CC-BCCTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGGTTSCBCSSCEESCCCCEEEEEEEETTTEEEEE
T ss_pred ce-eecchhhhcccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCcccccCCccCCccccCCCCEEEEecCcCCcceEEE
Confidence 21 012234478988887655543 33433322 12357888899999988888
Q ss_pred eeEE
Q 010144 471 VWEV 474 (517)
Q Consensus 471 vlr~ 474 (517)
+++-
T Consensus 422 vl~~ 425 (428)
T 3mqd_A 422 VFQR 425 (428)
T ss_dssp EEEC
T ss_pred EEee
Confidence 8763
|
| >2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=3.2e-14 Score=149.28 Aligned_cols=93 Identities=11% Similarity=0.087 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcC
Q 010144 162 DEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTY 240 (517)
Q Consensus 162 ~~la~~Aa~~aL~~agi~p~dID~LI~a~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag 240 (517)
.+|+.+|++++|+++|+++++||.+++++. ++...|..+.+|+.++|++.+.+++++++ +|++++.||..|.++|++|
T Consensus 33 ~~l~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~va~~lgl~~~~p~~~v~~-aCaS~~~Al~~A~~~I~~G 111 (395)
T 2ib8_A 33 TKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGGEGQAPTRQAVLGAGLPISTPCTTINK-VCASGMKAIMMASQSLMCG 111 (395)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTCCEEEEEC-GGGHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCchHHHHHHHHcCCCCCceEEEecc-cccHHHHHHHHHHHHHHCC
Confidence 466899999999999999999999988754 45567889999999999965789999997 9999999999999999999
Q ss_pred CCCEEEEEEecCCCC
Q 010144 241 KNKLAIVVSTESMGP 255 (517)
Q Consensus 241 ~~~~aLVVs~E~~s~ 255 (517)
..+.+||+++|..+.
T Consensus 112 ~~d~vlvgG~e~~s~ 126 (395)
T 2ib8_A 112 HQDVMVAGGMESMSN 126 (395)
T ss_dssp SCSEEEEEEEEEGGG
T ss_pred CCCEEEEEeeecccC
Confidence 999999999997653
|
| >2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.9e-14 Score=152.35 Aligned_cols=94 Identities=13% Similarity=0.193 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHc
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~a 239 (517)
..+|+.+|+++||+++|+++++||.|+++++ +++..|..+..++.++|++.+.++++++. +|++++.||.+|.++|++
T Consensus 55 ~~~L~~~Aa~~AL~dAgl~~~~id~v~~g~~~~~~~~~~~a~~~a~~lGl~~~~p~~~v~~-aCss~~~Al~~A~~~I~~ 133 (418)
T 2iik_A 55 PDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGAGAIMARIAQFLSDIPETVPLSTVNR-QCSSGLQAVASIAGGIRN 133 (418)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTSCEEEEEC-GGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCccccccHHHHHHHHcCCCCCceEEEeCC-CCHHHHHHHHHHHHHHHC
Confidence 3567899999999999999999999998754 44445677888899999965789999997 999999999999999999
Q ss_pred CCCCEEEEEEecCCCC
Q 010144 240 YKNKLAIVVSTESMGP 255 (517)
Q Consensus 240 g~~~~aLVVs~E~~s~ 255 (517)
|..+.+||+++|.++.
T Consensus 134 G~~d~vLv~G~e~~s~ 149 (418)
T 2iik_A 134 GSYDIGMACGVESMSL 149 (418)
T ss_dssp TSCSEEEEEEEEETTT
T ss_pred CCCCEEEEeccccCcc
Confidence 9999999999998764
|
| >1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A | Back alignment and structure |
|---|
Probab=99.58 E-value=2.5e-14 Score=150.20 Aligned_cols=92 Identities=13% Similarity=0.194 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHHhCC----CCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHH
Q 010144 162 DEIIFDTLDKLFARTD----ISPSEIDVLVVNVS-LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQL 236 (517)
Q Consensus 162 ~~la~~Aa~~aL~~ag----i~p~dID~LI~a~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~l 236 (517)
.+|+.+|++++|+++| +++++||.|+++++ ++...|..+.+|+.++|++.+.++++++. +|++++.||.+|.++
T Consensus 36 ~~La~~Aa~~Al~~Ag~~~~l~~~~id~v~~g~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~-aCasg~~Al~~A~~~ 114 (393)
T 1afw_A 36 DYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRAACLASGIPYSTPFVALNR-QCSSGLTAVNDIANK 114 (393)
T ss_dssp HHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTSCEEEEEC-GGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCCCHHHCCEEEEEecCCCCCCChHHHHHHHHcCCCCCceEEEEcC-cCHHHHHHHHHHHHH
Confidence 4668999999999999 99999999998754 45556788999999999965789999997 999999999999999
Q ss_pred HHcCCCCEEEEEEecCCC
Q 010144 237 FRTYKNKLAIVVSTESMG 254 (517)
Q Consensus 237 L~ag~~~~aLVVs~E~~s 254 (517)
|++|..+.+||+++|.++
T Consensus 115 I~~G~~d~vLv~G~e~~s 132 (393)
T 1afw_A 115 IKVGQIDIGLALGVESMT 132 (393)
T ss_dssp HHTTSCSEEEEEEEEEHH
T ss_pred HHCCCCCEEEEEEEEecC
Confidence 999999999999999754
|
| >2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A | Back alignment and structure |
|---|
Probab=99.58 E-value=3.1e-14 Score=151.73 Aligned_cols=95 Identities=20% Similarity=0.214 Sum_probs=83.2
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCC-CCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHH
Q 010144 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFS-PAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLF 237 (517)
Q Consensus 160 ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s-~~~-~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL 237 (517)
...+|+.+|+++||+++|+++++||.|+++++ +++ ..|..+.+|+.+||++.+.++++++. +|++++.||.+|.++|
T Consensus 54 ~~~~La~~Aa~~AL~dAGl~~~~Id~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~-aCaSg~~Al~~A~~~I 132 (442)
T 2wu9_A 54 YPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVAVRTVNR-QCSSGLQAVADVAAAI 132 (442)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGGCCCEEEECCSSBHHHHHHHHHHHHHHTTCCTTSCEEEEEC-GGGHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCccCCCChHHHHHHHHcCCCCCceEEEeCC-cCHHHHHHHHHHHHHH
Confidence 34677999999999999999999999998764 322 23567899999999965789999997 9999999999999999
Q ss_pred HcCCCCEEEEEEecCCCC
Q 010144 238 RTYKNKLAIVVSTESMGP 255 (517)
Q Consensus 238 ~ag~~~~aLVVs~E~~s~ 255 (517)
++|..+.+||+++|.++.
T Consensus 133 ~sG~~d~vLvgG~e~~s~ 150 (442)
T 2wu9_A 133 KAGFYDIGIGAGLESMTT 150 (442)
T ss_dssp HTTSCSEEEEEEEEETTT
T ss_pred HCCCCCEEEEEEEeecCC
Confidence 999999999999998764
|
| >2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.58 E-value=3.3e-13 Score=155.59 Aligned_cols=255 Identities=15% Similarity=0.129 Sum_probs=169.4
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCcCE----EEEee-cCCCCC-------------C-----cHHHHHHHHcCCCCCeeE
Q 010144 159 SEMDEIIFDTLDKLFARTDISPSEIDV----LVVNV-SLFSPA-------------P-----SLTSRIINRYNLRNDIKA 215 (517)
Q Consensus 159 ~ea~~la~~Aa~~aL~~agi~p~dID~----LI~a~-s~~~~~-------------P-----s~a~~I~~~LGl~~~~~~ 215 (517)
+-..+|+.+|+.+||+++|+++++||. |++++ +.++.. | .++.+|+..||+++ ++
T Consensus 93 dp~~rL~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~G--ps 170 (915)
T 2qo3_A 93 DPQQRLLLETSWELVENAGIDPHSLRGTATGVFLGVAKFGYGEDTAAAEDVEGYSVTGVAPAVASGRISYTMGLEG--PS 170 (915)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCGGGGTTBCCEEEEECCCCCTTTTCC---CTTCHHHHTTCHHHHHHHHHHHHTBCS--CE
T ss_pred CHHHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEecCchHHhhhcccccccccccccccccHHHHHHHHHhCCCC--CE
Confidence 344789999999999999999999983 66664 344321 1 46889999999974 89
Q ss_pred EEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCC----------CC-------CCCCccccccccccccceEE
Q 010144 216 FNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN----------WY-------CGREKSMMLSNILFRSGGCS 278 (517)
Q Consensus 216 ~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~----------~~-------~~~dr~~lv~~~lfGDGAAA 278 (517)
+++.. +|+|++.||.+|.++|++|..+.|||+++|.++.. .. +..++. ..+++||||+|
T Consensus 171 ~tv~t-aCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~p~~~~~~~~~~~ls~~g~~~~Fd~~a---dG~v~gEGaga 246 (915)
T 2qo3_A 171 ISVDT-ACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPGVFVDFSRQRALAADGRSKAFGAGA---DGFGFSEGVTL 246 (915)
T ss_dssp EEEEC-GGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSSTHHHHHHHTTTCBCSSCCCCTTBTTC---CCBCBBCEEEE
T ss_pred EEECC-CCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcCHHHHHHHhhhcccCCCCCcccccCCC---CceeecCceEE
Confidence 99997 99999999999999999999999999999987531 01 111112 26899999999
Q ss_pred EEEeecccccccchhhc-cceeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHH
Q 010144 279 MLLTNNRALKHKAILKL-NCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQF 357 (517)
Q Consensus 279 vLLs~~~~~~~~~~~~l-~~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~ 357 (517)
+||++.....+ .+-.+ ..+..+...+|+... +.. .|.. .
T Consensus 247 vVL~~~~~A~~-~g~~i~a~I~G~~~~~dg~~~-------------~~~----~p~~-------------------~--- 286 (915)
T 2qo3_A 247 VLLERLSEARR-NGHEVLAVVRGSALNQDGASN-------------GLS----APSG-------------------P--- 286 (915)
T ss_dssp EEEEEHHHHHH-TTCCCCEEEEEEEEEECCSCS-------------STT----CCCH-------------------H---
T ss_pred EEEeEhHHhhh-CCCCeEEEEEEEEEecCCCcc-------------CCC----CCCH-------------------H---
Confidence 99987543210 01111 112233333343211 100 0000 0
Q ss_pred HHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHH-----HHHHhhCCCCcc---cchhhhhcccCc
Q 010144 358 RYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVI-----DGTGKGLELDEY---DLEPARMALHRF 429 (517)
Q Consensus 358 ~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il-----~~i~~~Lgl~~e---~~~~S~~~l~~~ 429 (517)
...+.+++++ +++|++| +|||++..|..+..+- ..+.+.++.... .+. --..-..+
T Consensus 287 -----~~~~~i~~Al-------~~Agl~p---~dId~ve~HgtgT~~gD~~E~~al~~~f~~~~~~~~~~~-vgs~K~~i 350 (915)
T 2qo3_A 287 -----AQRRVIRQAL-------ESCGLEP---GDVDAVEAHGTGTALGDPIEANALLDTYGRDRDADRPLW-LGSVKSNI 350 (915)
T ss_dssp -----HHHHHHHHHH-------HHTTCCG---GGCCEEECCCCCCTTTHHHHHHHHHHHTSSSCCTTSCEE-EECTHHHH
T ss_pred -----HHHHHHHHHH-------HHcCCCH---HHCcEEEecCCCCccCCHHHHHHHHHHhccccCCCCccc-ccCcccce
Confidence 1223445555 6899997 9999999998765443 345667776432 121 02345788
Q ss_pred ccchhhHHHHHHHHH---HHcCCCC--------------------------------CCCEEEEEEechhHHhheeeeEE
Q 010144 430 GNTSAGGLWYVLGYM---EAKKRLK--------------------------------KGDRILMISLGAGFKCNNCVWEV 474 (517)
Q Consensus 430 GNtsSASi~~~L~~~---~~~g~i~--------------------------------~Gd~VlliafG~G~t~~a~vlr~ 474 (517)
||+.+|+-...|..+ ++.+.+. ...++++-+||.|-+-..++++-
T Consensus 351 GH~~~AaG~~~lik~~l~L~~~~ipp~~~~~~~~p~~~~~~~~~~~~~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~ 430 (915)
T 2qo3_A 351 GHTQAAAGVTGLLKVVLALRNGELPATLHVEEPTPHVDWSSGGVALLAGNQPWRRGERTRRAAVSAFGISGTNAHVIVEE 430 (915)
T ss_dssp CBCGGGHHHHHHHHHHHHHHHTEECCCSSCSSBCTTSCCSSSSEEECSSCEECCSSSSCCEEEEEEECTTSEEEEEEEEE
T ss_pred eCCccccchHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCceeeecCCcccccCCCCcEEEEeeecCCCceEEEEEee
Confidence 999998877766543 3333221 12478899999999988999876
Q ss_pred e
Q 010144 475 M 475 (517)
Q Consensus 475 ~ 475 (517)
.
T Consensus 431 ~ 431 (915)
T 2qo3_A 431 A 431 (915)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.4e-13 Score=158.64 Aligned_cols=324 Identities=14% Similarity=0.084 Sum_probs=195.1
Q ss_pred CCCceEEEEEEEEeCCCCCceecHHHHHHHHHhcc----cCChHHHHHHHHHHH-HhCCceeEeccCCCcCCCCC----C
Q 010144 81 RGQCCYMLAYECYKPCDETRRLDTESCARVVWRNK----KLGLEEYRFLLKNMV-SSGIGEETYGPRNVVEGREE----S 151 (517)
Q Consensus 81 ~~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~----~~~~~~~~~~~ri~~-~sGI~~r~~~~~~~~~~~~~----~ 151 (517)
...+|.|+|+||-+|.. .-+.+++.+.+..-. .+..+ +... ......-.++.+ +...++. .
T Consensus 37 ~~~~iaIvG~~~~~Pgg---~~~~~~~w~~L~~g~~~i~~~p~~------r~~~~~~~~~~~~~l~~-~~~fD~~~f~i~ 106 (917)
T 2hg4_A 37 AGEPIAIVGMACRFPGD---VDSPESFWEFVSGGGDAIAEAPAD------RGWEPDPDARLGGMLAA-AGDFDAGFFGIS 106 (917)
T ss_dssp HHCCEEEEEEEEEBTTT---BCSHHHHHHHHHTTCCCCEECCGG------GCCCCCSSCCEEBCCTT-TTEECTGGGTCC
T ss_pred CCCCEEEEeceEECCCC---CCCHHHHHHHHHcCCCccccCCcc------cccCCCCCcceeeEecC-ccccChhhcCCC
Confidence 45789999999999986 456888988764311 00110 0000 000000011111 0000010 0
Q ss_pred ccHHHhHhhHHHHHHHHHHHHHHhCCCCCCCcCE----EEEeec-CCCCC-------------------CcHHHHHHHHc
Q 010144 152 PSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDV----LVVNVS-LFSPA-------------------PSLTSRIINRY 207 (517)
Q Consensus 152 ~~m~~~~~ea~~la~~Aa~~aL~~agi~p~dID~----LI~a~s-~~~~~-------------------Ps~a~~I~~~L 207 (517)
+.-++...-...|+.+|+.+||+++|+++++||. |+++++ .++.. ..++.+|+..|
T Consensus 107 ~~ea~~mdp~~rl~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~l 186 (917)
T 2hg4_A 107 PREALAMDPQQRIMLEISWEALERAGHDPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYCL 186 (917)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHHHTTCCGGGGTTSCEEEEEEECCCCCSCCTTSSCGGGGGGHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEeCCchhhhhhhcCccccCcccccccccchHHHHHHHhc
Confidence 1112222344789999999999999999999884 666543 34321 13578999999
Q ss_pred CCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCCC----------CCC------CCccccccccc
Q 010144 208 NLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNW----------YCG------REKSMMLSNIL 271 (517)
Q Consensus 208 Gl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~~----------~~~------~dr~~lv~~~l 271 (517)
|+++ +++.+.. +|++++.||.+|.+.|++|..+.|||+++|.++... ... -|. --..++
T Consensus 187 gl~G--ps~tv~t-aCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~p~~~~~~~~~~~ls~~g~~~pFd~--~adG~~ 261 (917)
T 2hg4_A 187 GLEG--PAMTVDT-ACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAFTEFRSQGGLAADGRCKPFSK--AADGFG 261 (917)
T ss_dssp TCCS--CEEEEEC-GGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSTHHHHHHTTSSCBCTTSCCCTTBT--TCCCBC
T ss_pred CCCC--CeEeecC-CcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccChhhhHhhhhccCcCCccccCcccc--cccCCC
Confidence 9974 8999997 999999999999999999999999999999876521 000 011 113689
Q ss_pred cccceEEEEEeecccccccchhhcc-ceeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhccccc
Q 010144 272 FRSGGCSMLLTNNRALKHKAILKLN-CLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKI 350 (517)
Q Consensus 272 fGDGAAAvLLs~~~~~~~~~~~~l~-~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~ 350 (517)
+||||+|+||.+.....+ .+-.+. .+..+....|+... +.. . |..
T Consensus 262 ~gEGagavVL~~l~~A~~-~g~~i~a~I~G~~~~~dg~~~-------------~~~-~---P~~---------------- 307 (917)
T 2hg4_A 262 LAEGAGVLVLQRLSAARR-EGRPVLAVLRGSAVNQDGASN-------------GLT-A---PSG---------------- 307 (917)
T ss_dssp BBCEEEEEEEEEHHHHHH-TTCCCCEEEEEEEEEECCSCS-------------SSS-C---CCH----------------
T ss_pred CcceEEEEEEeeHHHHHh-CCCCeEEEEEEEEEecCCCcc-------------CCC-C---CCH----------------
Confidence 999999999987543210 011111 12233333343211 000 0 000
Q ss_pred CcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHH-----HHHHhhCCCCcc---cchhh
Q 010144 351 LPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVI-----DGTGKGLELDEY---DLEPA 422 (517)
Q Consensus 351 ~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il-----~~i~~~Lgl~~e---~~~~S 422 (517)
. ...+.+++++ +++|++| +|||++..|..+..+- +.+.+.+|.... .+. -
T Consensus 308 ---~--------~q~~ai~~Al-------~~Agl~p---~dId~veaHgtgT~~gD~~E~~al~~~fg~~~~~~~~~~-v 365 (917)
T 2hg4_A 308 ---P--------AQQRVIRRAL-------ENAGVRA---GDVDYVEAHGTGTRLGDPIEVHALLSTYGAERDPDDPLW-I 365 (917)
T ss_dssp ---H--------HHHHHHHHHH-------HHHTCCG---GGCCEEECCCCCCTTHHHHHHHHHHTTTTTSSCTTSCCE-E
T ss_pred ---H--------HHHHHHHHHH-------HHcCCCH---HHCCEEeeccCCCccCcHHHHHHHHHHhccccCCCCcee-c
Confidence 0 1223344555 6889997 9999999999887653 345566665321 111 0
Q ss_pred hhcccCcccchhhHHHHHHHHH---HHcCCC-----------------------------C---CCCEEEEEEechhHHh
Q 010144 423 RMALHRFGNTSAGGLWYVLGYM---EAKKRL-----------------------------K---KGDRILMISLGAGFKC 467 (517)
Q Consensus 423 ~~~l~~~GNtsSASi~~~L~~~---~~~g~i-----------------------------~---~Gd~VlliafG~G~t~ 467 (517)
-.+-..+||+.+|+-...|..+ ++.+.+ . ...++..-+||.|-+-
T Consensus 366 gs~K~~iGH~~~AaG~~~lik~vl~L~~~~ipp~~~~~~~~p~i~~~~~~~~v~~~~~~w~~~~~~r~a~v~sfG~gG~N 445 (917)
T 2hg4_A 366 GSVKSNIGHTQAAAGVAGVMKAVLALRHGEMPRTLHFDEPSPQIEWDLGAVSVVSQARSWPAGERPRRAGVSSFGISGTN 445 (917)
T ss_dssp ECTHHHHCBCGGGTTHHHHHHHHHHHHHTEECCCTTCCSBCTTSCC---CCEECCSCEECCCCSSCCEEEEEEECTTSEE
T ss_pred cCcccceecchhhhHHHHHHHHHHHHhcCCcCCCCCCCCCCccCCccccceeecCCcccCCCCCCCCEEEEeeecCCCce
Confidence 1345678999988766665433 333321 0 1257888999999998
Q ss_pred heeeeEEe
Q 010144 468 NNCVWEVM 475 (517)
Q Consensus 468 ~a~vlr~~ 475 (517)
+.++++-.
T Consensus 446 ah~vl~~~ 453 (917)
T 2hg4_A 446 AHVIVEEA 453 (917)
T ss_dssp EEEEEEEC
T ss_pred EEEEeccC
Confidence 88888764
|
| >3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A | Back alignment and structure |
|---|
Probab=99.52 E-value=1e-12 Score=152.12 Aligned_cols=323 Identities=13% Similarity=0.095 Sum_probs=194.3
Q ss_pred CCceEEEEEEEEeCCCCCceecHHHHHHHHHhccc-CChHHHHHHHHHHHHhCCceeEeccCCCcCCCCC----CccHHH
Q 010144 82 GQCCYMLAYECYKPCDETRRLDTESCARVVWRNKK-LGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREE----SPSLAE 156 (517)
Q Consensus 82 ~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~-~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~----~~~m~~ 156 (517)
..+|-|+|+||.+|.. .+.+++.+.+..-.. ..+...++- ....+...+.-..+++...++. .+.-++
T Consensus 3 ~~~IaIvGmg~r~P~~----~~~~~~W~~l~~g~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~FD~~~f~i~~~ea~ 75 (965)
T 3hhd_A 3 GEEVVIAGMSGKLPES----ENLQEFWDNLIGGVDMVTDDDRRWK---AGLYGLPRRSGKLKDLSRFDASFFGVHPKQAH 75 (965)
T ss_dssp CCCEEEEEEEEEBTTB----SSHHHHHHHHHTTCCCEECSSSSSC---TTGGGCCSCEECCSCSSCCCTTTTTCCHHHHH
T ss_pred CCCEEEEeeeEECCCC----CCHHHHHHHHHcCCCcccCCCcccc---cccccCcccccccCChhhcChhhcCCCHHHHh
Confidence 5789999999999987 789999987643110 000000000 0000001110000111001110 011111
Q ss_pred hHhhHHHHHHHHHHHHHHhCCCCCCCcC----EEEEeec-CCC-------------------CCCcHHHHHHHHcCCCCC
Q 010144 157 AFSEMDEIIFDTLDKLFARTDISPSEID----VLVVNVS-LFS-------------------PAPSLTSRIINRYNLRND 212 (517)
Q Consensus 157 ~~~ea~~la~~Aa~~aL~~agi~p~dID----~LI~a~s-~~~-------------------~~Ps~a~~I~~~LGl~~~ 212 (517)
..+-...|+.+|+.+||+++|++|++|| .++++++ .++ ..+.++.+|+..||+++
T Consensus 76 ~mDp~~rL~leaa~eALedAGi~~~~i~~~~~Gv~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~G- 154 (965)
T 3hhd_A 76 TMDPQLRLLLEVTYEAIVDGGINPDSLRGTHTGVWVGVSGSETSEALSRDPETLVGYSMVGCQRAMMANRLSFFFDFRG- 154 (965)
T ss_dssp TSCHHHHHHHHHHHHHHHHTTCCGGGGTTSCCEEEEEECCCHHHHHHTSCTTTCCTHHHHHHSTTHHHHHHHHHHTCCS-
T ss_pred hcCHHHHHHHHHHHHHHHHcCCChHHcCCceeEEEEeccchhHHHHHhcCccccCcccccccccchHHHHHHHHhCCCC-
Confidence 2233477999999999999999999998 6776642 221 23457899999999974
Q ss_pred eeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCC----------C-------CCCCCccccccccccccc
Q 010144 213 IKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN----------W-------YCGREKSMMLSNILFRSG 275 (517)
Q Consensus 213 ~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~----------~-------~~~~dr~~lv~~~lfGDG 275 (517)
+++.+.. +|++++.||.+|.+.|++|..+.||+.++|.++.. . ....++. ....+|||
T Consensus 155 -Ps~tvdt-ACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~p~~~~~~~~~~~ls~~g~~~~Fd~~a---dG~~~gEG 229 (965)
T 3hhd_A 155 -PSIALDT-ACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNTSVQFLRLGMLSPEGTCKAFDTAG---NGYCRSEG 229 (965)
T ss_dssp -CEEEEEC-GGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCCHHHHHHHHHHTCBCTTCCCCTTBTTC---CSBCBBCE
T ss_pred -CeeeecC-chHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCcCCCCccccchhcc---CCccccce
Confidence 8999997 99999999999999999999999999999987631 0 0111122 26789999
Q ss_pred eEEEEEeecccccccchhhccceeeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHH
Q 010144 276 GCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLRE 355 (517)
Q Consensus 276 AAAvLLs~~~~~~~~~~~~l~~i~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e 355 (517)
|+|+||.+.....+ -+ ..+..+...+|+.....+.. |.. .
T Consensus 230 agavvL~~l~~A~~--i~--a~I~g~~~n~dg~~~~~~t~----------------P~~-------------------~- 269 (965)
T 3hhd_A 230 VVAVLLTKKSLARR--VY--ATILNAGTNTDGFKEQGVTF----------------PSG-------------------D- 269 (965)
T ss_dssp EEEEEEEEGGGCSS--CS--EEEEEEEEEECCCCTTCTTS----------------CCH-------------------H-
T ss_pred EEEEEEecHHHcCc--cc--EEEEeeeccCCCCCCCCCcC----------------CCH-------------------H-
Confidence 99999998654321 11 11333333444321111110 000 0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHHH-----HHHhhCCCCccc-chhhhhcccCc
Q 010144 356 QFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVID-----GTGKGLELDEYD-LEPARMALHRF 429 (517)
Q Consensus 356 ~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il~-----~i~~~Lgl~~e~-~~~S~~~l~~~ 429 (517)
...+.+++++ +++|++| +|||++-.|-.+..+=| .+.+.++-..++ +. --.+-.++
T Consensus 270 -------~q~~~i~~Al-------~~Agl~p---~dIdyvEaHgTgT~~gD~~E~~Al~~~f~~~~~~~~~-vgs~Ks~i 331 (965)
T 3hhd_A 270 -------IQEQLIRSLY-------QSAGVAP---ESFEYIEAHGTGTKVGDPQELNGITRALCATRQEPLL-IGSTKSNM 331 (965)
T ss_dssp -------HHHHHHHHHH-------HHTTCCG---GGEEEEECCCCCCTTHHHHHHHHHHHHHCSSCSSCEE-EECTHHHH
T ss_pred -------HHHHHHHHHH-------HHhCCCH---HHhccccccCCCCCCCCHHHHHHHHHHhcccCCCcee-eecccccc
Confidence 0123344555 6899997 99999999976654433 344555532221 11 01233567
Q ss_pred ccchhhHHHHHHHH---HHHcCCC-----------------------------CCCCEEEEEEechhHHhheeeeEEe
Q 010144 430 GNTSAGGLWYVLGY---MEAKKRL-----------------------------KKGDRILMISLGAGFKCNNCVWEVM 475 (517)
Q Consensus 430 GNtsSASi~~~L~~---~~~~g~i-----------------------------~~Gd~VlliafG~G~t~~a~vlr~~ 475 (517)
||+-+|+=...|.. ++++|.+ .+.+++..-+||.|-+-+.++++-.
T Consensus 332 GH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~~v~~~~~~~~~~~a~v~sfG~gG~Nah~il~~~ 409 (965)
T 3hhd_A 332 GHPEPASGLAALAKVLLSLEHGLWAPNLHFHSPNPEIPALLDGRLQVVDQPLPVRGGNVGINSFGFGGSNVHIILRPN 409 (965)
T ss_dssp CBCGGGHHHHHHHHHHHHHHHTEECCCSSCCSBCTTCHHHHHTSEEECCSCEECCSCEEEEEEECTTSEEEEEEEEEC
T ss_pred ccchhhhhHHHHHHHHHHHhcCCcCCccCCCCCCccCcccccCceeecCCCccCCCCeEEEecccCCCceEEEEeccC
Confidence 99988886665543 2333321 1234678899999999888888754
|
| >4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.21 E-value=1.8e-10 Score=125.18 Aligned_cols=94 Identities=6% Similarity=0.033 Sum_probs=76.2
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCcCEEEEee----c---------CCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHH
Q 010144 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNV----S---------LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSAS 226 (517)
Q Consensus 160 ea~~la~~Aa~~aL~~agi~p~dID~LI~a~----s---------~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsgg 226 (517)
++.+|+.+|++++|+++|++|++||-+|.++ + .....+.....++.++|++ ..+.+.+.. +|+++
T Consensus 41 s~~dL~a~Ai~~AL~dAGl~p~~Vd~vI~g~~~~~~~~~~~~~~~~~g~~~~~~~~va~~lGl~-~~~~~~~~~-~caSg 118 (520)
T 4egv_A 41 SSVELATEAAKAALHDCGADADTVARAIDTVAGTRQFEISGPASAPLGVSSNYPRSVARNIGAD-PAHAVLEVI-GGQSP 118 (520)
T ss_dssp CHHHHHHHHHHHHHHHTSSCHHHHHHHCCEEEECCC--------------CCHHHHHHHHHTCC-CSEEEECCS-STTHH
T ss_pred CHHHHHHHHHHHHHHHhCcCHHHcceEEEEEeecccccccchhhhhhccccCHHHHHHHHcCCC-CceEEEecC-CCHHH
Confidence 3457799999999999999999987665321 1 0112446778999999998 478888885 99999
Q ss_pred HHHHHHHHHHHHcCCCCEEEEEEecCCCC
Q 010144 227 VVAVDLVQQLFRTYKNKLAIVVSTESMGP 255 (517)
Q Consensus 227 l~AL~lA~~lL~ag~~~~aLVVs~E~~s~ 255 (517)
+.++..|.+.|++|..+.+|+.++|.+|.
T Consensus 119 ~~av~~AA~aI~aG~advvlAgG~EsMS~ 147 (520)
T 4egv_A 119 QHLATEFGGKIAAGENDVVLIFGSENTST 147 (520)
T ss_dssp HHHHHHHHHHHHTTSCSEEEEEEEECCC-
T ss_pred HHHHHHHHHHHHcCCCCEEEEEEEEeccc
Confidence 99999999999999999999999999874
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=1.2e-09 Score=137.76 Aligned_cols=266 Identities=14% Similarity=0.065 Sum_probs=163.2
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCcC--------EEEEeecC-C------------------------CCCCcHHHHHHH
Q 010144 159 SEMDEIIFDTLDKLFARTDISPSEID--------VLVVNVSL-F------------------------SPAPSLTSRIIN 205 (517)
Q Consensus 159 ~ea~~la~~Aa~~aL~~agi~p~dID--------~LI~a~s~-~------------------------~~~Ps~a~~I~~ 205 (517)
.....|+.+|+.+||+++|++|++|+ .++++++. . ......++.+..
T Consensus 2645 Dp~~rL~l~aa~eALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~is~ 2724 (3089)
T 3zen_D 2645 DRVALWNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMYHGNLLGRAKPNDILQEVLPNVVAAHVMQ 2724 (3089)
T ss_dssp CHHHHHHHHHHHHHHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHHHHHTTCCCCTTHHHHTSTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHHHHHhcCCCccchhhccccccHHHHHHHH
Confidence 34578999999999999999998884 45555421 0 111235677775
Q ss_pred -HcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCCC---------C-----------------
Q 010144 206 -RYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNW---------Y----------------- 258 (517)
Q Consensus 206 -~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~~---------~----------------- 258 (517)
.+|++ .+++.+.. +|+|++.||.+|.++|++|..+.+||.++|.++... .
T Consensus 2725 ~~lGl~--GPs~tV~t-ACSSsl~Al~~A~~~IrsG~~d~aLaGGve~ls~~~~~~f~~~~als~~~~~~~~~~sp~~~c 2801 (3089)
T 3zen_D 2725 SYVGGY--GAMVHPVG-ACATAAVSVEEGVDKIKLGKADLVIAGGFDDLTLEAIIGFGDMAATADTEMMRAKGISDSKFS 2801 (3089)
T ss_dssp HTTCCC--SCEECCBC-TTCHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHHHTCBCCHHHHHHTTCCTTTSC
T ss_pred HHcCCC--CCceeecc-chhhHHHHHHHHHHHHHCCCCCeeEEeeecccCHHHHHHHHHhhhhhcchhhhhccCCccccc
Confidence 45996 48999997 999999999999999999999999999999865310 0
Q ss_pred CCCCccccccccccccceEEEEEeecccccccchhhccceee-eeeccCcccccceeeccccCCCCCcccchhHHHHHHH
Q 010144 259 CGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVR-THFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAAL 337 (517)
Q Consensus 259 ~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~-t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~ 337 (517)
...|... ..+++||||+|+||.+...... .+-++..++. +...+|+... .+..| + .+.
T Consensus 2802 rpFd~~~--dG~v~GEGAgavVL~~~e~A~~-~G~~I~avI~g~~~n~Dg~~~-~~~aP----~-~g~------------ 2860 (3089)
T 3zen_D 2802 RANDRRR--LGFLEAQGGGTILLARGDLALK-MGLPVLAVVGYAQSFADGVHT-SIPAP----G-LGA------------ 2860 (3089)
T ss_dssp CSSBTTC--CCBCBBCEEEEEEEEEHHHHHH-HTCCCCEEEEEEEEECCCCCC-CSSCC----C-CGG------------
T ss_pred CccccCC--CCEEEeccceEEEEeeHHHHHh-CCCceEEEEEEEEEecCCccc-CccCC----c-hhH------------
Confidence 0011111 2578899999999997543211 1222222332 2233454321 11101 0 000
Q ss_pred HHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHHH--------HHH
Q 010144 338 AFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVID--------GTG 409 (517)
Q Consensus 338 ~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il~--------~i~ 409 (517)
..... .+ ..+.+.++| +++|++| +|||++-.|-.+..+-| .+.
T Consensus 2861 -----~~a~~----~~----------q~~ai~~AL-------~~AGl~p---~DIdyVEaHGTGT~lgD~~E~~al~al~ 2911 (3089)
T 3zen_D 2861 -----LGAAR----GG----------RESTLARSL-------AQLGVGA---DDIAVISKHDTSTLANDPNETELHERIA 2911 (3089)
T ss_dssp -----GGGST----TG----------GGSHHHHHH-------HTTTCCG---GGEEEEECCCCCCTTHHHHHHHHHHHHH
T ss_pred -----HhHhh----hh----------HHHHHHHHH-------HHcCCCH---HHeeEEEEecCCcccccHHHHHHHHHHH
Confidence 00000 00 012344455 6889996 99999999987755333 456
Q ss_pred hhCCCCcc-cchhhhhcccCcccchhhHHHHHHH---HHHHcCCCCC-------------------------------CC
Q 010144 410 KGLELDEY-DLEPARMALHRFGNTSAGGLWYVLG---YMEAKKRLKK-------------------------------GD 454 (517)
Q Consensus 410 ~~Lgl~~e-~~~~S~~~l~~~GNtsSASi~~~L~---~~~~~g~i~~-------------------------------Gd 454 (517)
+.+|.... ++.. -..-..+||+-+|+=...+. ..++.|.+.| -.
T Consensus 2912 ~~fg~~~~~~~~v-~s~Ks~iGH~~gAAG~~~lik~ll~L~~g~iPpt~~~~~~np~i~~~~~~~~~~~~~~w~~~~~~r 2990 (3089)
T 3zen_D 2912 DSMGRAPGNPLFI-VSQKTLTGHAKGGAAVFQMMGLCQILRDGVIPPNRSLDCVDDELATSGHFVWVREPLDLRGKFPLK 2990 (3089)
T ss_dssp HHTTCCTTCCEEE-ECSHHHHCBCSTTHHHHHHHHHHHHHHHCCBCCCTTCSSBCGGGGGCSSEEECSSCBCCCTTSCCC
T ss_pred HHhCccCCCccee-cccccccCCchhhhhHHHHHHHHHHHhcCccCCCCCCCCCCCCccccCCeeecCCCccCCCCCCCC
Confidence 67786652 3311 23345679988887544443 3444443211 24
Q ss_pred EEEEEEechhHHhheeeeEEeccC
Q 010144 455 RILMISLGAGFKCNNCVWEVMKDL 478 (517)
Q Consensus 455 ~VlliafG~G~t~~a~vlr~~~~~ 478 (517)
+++.-+||.|-+-+.++++-....
T Consensus 2991 ~a~vnSfGfGG~NahvVle~~~~~ 3014 (3089)
T 3zen_D 2991 AGLVTSLGFGHVSGLVALVHPEAF 3014 (3089)
T ss_dssp EEEEEEEETTTEEEEEEEECGGGT
T ss_pred EEEEccccCCCCeEEEEEecCchh
Confidence 678889999988888888764433
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=5.1e-07 Score=113.70 Aligned_cols=321 Identities=12% Similarity=0.064 Sum_probs=190.4
Q ss_pred CceEEEEEEEEeCCCCCceecHHHHHHHHHhccc-CChHHHHHHHHHHHHhCCceeE-eccCCCcCCCCC----CccHHH
Q 010144 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNKK-LGLEEYRFLLKNMVSSGIGEET-YGPRNVVEGREE----SPSLAE 156 (517)
Q Consensus 83 ~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~-~~~~~~~~~~ri~~~sGI~~r~-~~~~~~~~~~~~----~~~m~~ 156 (517)
.+|-|+|+||-.|.. -+.+++.+.+..-.. ..+...+| -....+...+. ++. ++...++. .+.-++
T Consensus 2 ~~iaI~G~~~~~p~~----~~~~~~w~~l~~g~~~~~~~~~~~---~~~~~~~~~~~g~~~-~~~~fd~~~f~i~~~ea~ 73 (2512)
T 2vz8_A 2 EEVVIAGMSGKLPES----ENLEEFWANLIGGVDMVTADDRRW---KAGLYGLPRRMGKLK-DLSRFDASFFGVHSKQAN 73 (2512)
T ss_dssp CCEEEEEEEEEBTTB----SSHHHHHHHHHTTCCCEEECSSSS---CTTGGGCCSEEECCS-CSSCCCTTTTTCCHHHHH
T ss_pred CCEEEEeeeeeCCCC----CCHHHHHHHHHcCCccccCCCccc---ccccccCcccceecC-CcccCCHhhcCCCHHHHH
Confidence 479999999999986 788999987643210 00000000 00000111111 111 10000110 011111
Q ss_pred hHhhHHHHHHHHHHHHHHhCCCCCCCcC----EEEEeec-CC----------CC--------CC-cHHHHHHHHcCCCCC
Q 010144 157 AFSEMDEIIFDTLDKLFARTDISPSEID----VLVVNVS-LF----------SP--------AP-SLTSRIINRYNLRND 212 (517)
Q Consensus 157 ~~~ea~~la~~Aa~~aL~~agi~p~dID----~LI~a~s-~~----------~~--------~P-s~a~~I~~~LGl~~~ 212 (517)
...--..++.+++.+||+++|+++++++ .|+++++ .+ .. .+ .++.+|...||+++
T Consensus 74 ~~dpq~rl~l~~~~eAle~Ag~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l~G- 152 (2512)
T 2vz8_A 74 TMDPQLRMLLEVTYEAIVDGGINPASLRGTSTGVWVGVSSSDASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDFKG- 152 (2512)
T ss_dssp TSCHHHHHHHHHHHHHHGGGTCCGGGGTTCSCEEEEEECCCHHHHHTTSCTTTSCGGGGGGTSTTHHHHHHHHHHTCCS-
T ss_pred hcCHHHHHHHHHHHHHHHHCCCChhhcCCCCeEEEEEeccHHHHHHHhcCccccCcceecccchhHHHHHHHHHhCCCC-
Confidence 2233367899999999999999876542 3444431 11 01 11 25889999999985
Q ss_pred eeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCC----------CCCC------CCccccccccccccce
Q 010144 213 IKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN----------WYCG------REKSMMLSNILFRSGG 276 (517)
Q Consensus 213 ~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~----------~~~~------~dr~~lv~~~lfGDGA 276 (517)
+++.+.. +||+++.||.+|.+.|++|..+.||+-+++.+... ...+ -|.+. ..+..|+|+
T Consensus 153 -ps~tv~t-ACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~p~~~~~~~~~~~ls~~g~c~~Fd~~a--dG~~~gEG~ 228 (2512)
T 2vz8_A 153 -PSITIDT-ACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNSSLQFMKLGMLSQDGTCRSFDAEG--TGYCRAEAV 228 (2512)
T ss_dssp -CEEEEEC-TTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCCHHHHHHHHHTTCBCTTCSCCSSSTTC--CCBCBBCEE
T ss_pred -Cceeecc-HhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccCHHHHHHHccCCCCCCCCCCCCCCCCC--CCcceeeeE
Confidence 8899997 99999999999999999999999999999975431 1111 12111 268899999
Q ss_pred EEEEEeecccccccchhhccce-eeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHH
Q 010144 277 CSMLLTNNRALKHKAILKLNCL-VRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLRE 355 (517)
Q Consensus 277 AAvLLs~~~~~~~~~~~~l~~i-~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e 355 (517)
+++||.+-.... ++..+ ..+....|+.....+..| .. .
T Consensus 229 ~~~vLk~l~~A~-----~i~a~i~g~~~n~dg~~~~~~t~P----------------~~-------------------~- 267 (2512)
T 2vz8_A 229 VAVLLTKKSLAR-----RVYATILNAGTNTDGSKEQGVTFP----------------SG-------------------D- 267 (2512)
T ss_dssp EEEEEEEGGGCS-----CCSEEEEEEEEEECCCCTTCSSSC----------------CH-------------------H-
T ss_pred EEEEEEEHHHCC-----cccEEEEEEEEcCCCCCCCCCCCC----------------CH-------------------H-
Confidence 999999865532 12222 233333443211111111 00 0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHHHH-----HHhhCCCCccc-chhhhhcccCc
Q 010144 356 QFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDG-----TGKGLELDEYD-LEPARMALHRF 429 (517)
Q Consensus 356 ~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il~~-----i~~~Lgl~~e~-~~~S~~~l~~~ 429 (517)
...+.+++++ +++|+.| +||+++-.|-.|..+=|. +.+.+|-...+ +. --.+=.++
T Consensus 268 -------~q~~~i~~al-------~~ag~~p---~~i~yveaHGTgT~~gD~~E~~al~~~f~~~~~~~~~-igS~Ks~i 329 (2512)
T 2vz8_A 268 -------VQEQLIRSLY-------APAGPDP---ESLEYIEAHGTGTKVGDPQELNGIVNALCATRREPLL-IGSTKSNM 329 (2512)
T ss_dssp -------HHHHHHHTTS-------GGGSSCT---TSCCEEECCCCCCTTHHHHHHHHHHHHHCSCSSSCCE-EECHHHHH
T ss_pred -------HHHHHHHHHH-------HHcCCCH---HHCCEEEeecCCCCCCCHHHHHHHHHHhcccCCCCce-eecccccc
Confidence 1224456666 7899997 899999999887665544 44556532221 10 01233578
Q ss_pred ccchhhHHHHHHHH---HHHcCCCC-----------------------------CCCEEEEEEechhHHhheeeeEEe
Q 010144 430 GNTSAGGLWYVLGY---MEAKKRLK-----------------------------KGDRILMISLGAGFKCNNCVWEVM 475 (517)
Q Consensus 430 GNtsSASi~~~L~~---~~~~g~i~-----------------------------~Gd~VlliafG~G~t~~a~vlr~~ 475 (517)
||+-+|+=...|.. ++++|.+. ++.++..-+||.|.+-++++++-.
T Consensus 330 GH~~~AaG~~~~ik~~l~l~~~~ipp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~a~vnsfG~gG~Nah~il~~~ 407 (2512)
T 2vz8_A 330 GHPEPASGVAALIKVLLSLEHGVWAPNLHYHTPNPEIPALQDGRLQVVDRPLPIRGGNVGINSFGFGGSNVHVILQPN 407 (2512)
T ss_dssp CBCGGGHHHHHHHHHHHHHTTTBCCCCSSCCSCCTTSSSSSSSSCEECCSCCBCCSCCEEEEEEETTTEEEEEEEEEC
T ss_pred cccccccchhHHHHHHHHHHCCCcCCCCCCCCCCccccccccCceEecCCCccCCCCeEEEeccCCCCceeEEEEccC
Confidence 99988887777654 33333221 234788899999999999998753
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.41 E-value=1e-06 Score=104.07 Aligned_cols=122 Identities=13% Similarity=0.102 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHHHhCCCC-CCC----cC----EEEEeec-CCC-----------------------CCC-cHHHHHHH-H
Q 010144 162 DEIIFDTLDKLFARTDIS-PSE----ID----VLVVNVS-LFS-----------------------PAP-SLTSRIIN-R 206 (517)
Q Consensus 162 ~~la~~Aa~~aL~~agi~-p~d----ID----~LI~a~s-~~~-----------------------~~P-s~a~~I~~-~ 206 (517)
..|+..|+.+||+++|++ |.+ |+ .++++++ .++ ..+ ..+++|.. .
T Consensus 1013 qrLaLeAa~EALedAGI~dP~ei~~~i~~s~vGV~vGSg~Gg~~~l~~~~~~~~~~~~v~~~~l~~~~~nt~Aa~Vs~~~ 1092 (1688)
T 2pff_A 1013 TLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLL 1092 (1688)
T ss_dssp TTHHHHHHHHHHTTTTCSSGGGGGGGTCCSCSCCCCCCCSCCCSSHHHHHHSSSSCCCCCSTTHHHHCTHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHcCCCChHHhccccCCceEEEEecccCCCHHHHHHHHHHHHhcCCCCcchhccccHHHHHHHHHHHH
Confidence 457899999999999997 654 22 2333321 110 012 34566776 6
Q ss_pred cCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCCCC---------C-----------CCCcccc
Q 010144 207 YNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWY---------C-----------GREKSMM 266 (517)
Q Consensus 207 LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~~~---------~-----------~~dr~~l 266 (517)
||+++ +++.+.+ +|++++.||++|.+.|++|..+.+||.++|.++.... . +..++..
T Consensus 1093 LGl~G--Ps~TVdt-ACASSL~AL~lA~~aIrsGeaDvaLVGGvE~msp~~~~~Fa~mgaLS~~~~e~a~G~~Pd~~cRP 1169 (1688)
T 2pff_A 1093 ISSSG--PIKTPVG-ACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSRP 1169 (1688)
T ss_dssp CCCCC--CCCCCCC-TTTTTHHHHHHHHHHHHTTTCSCBCCCCCCCCCTTTTTTTTTTSCSCCTTTTTTSSCCSSSSCCS
T ss_pred cCCcC--CeEEecC-CCchHHHHHHHHHHHHHCCCCCEEEEeeeccCCHHHHHHHHhccccccChhhhhcCCChhhccCc
Confidence 99974 8999998 9999999999999999999999999999998664110 0 0000000
Q ss_pred ----ccccccccceEEEEEeeccc
Q 010144 267 ----LSNILFRSGGCSMLLTNNRA 286 (517)
Q Consensus 267 ----v~~~lfGDGAAAvLLs~~~~ 286 (517)
-..+.+||||+++||.+...
T Consensus 1170 Fd~~rdGfv~GEGAGavVLesle~ 1193 (1688)
T 2pff_A 1170 ATTTRNGFMEAQGAGIQIIMQADL 1193 (1688)
T ss_dssp SSSSCCCCCCCSCCEEEEEECSHH
T ss_pred CccCCCCCccccceEEEEeCcHHH
Confidence 02578999999999998643
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=9.1e-06 Score=98.61 Aligned_cols=122 Identities=11% Similarity=0.110 Sum_probs=87.7
Q ss_pred hHHHHHHHHHHHHHHhCCC-CCCC----cC----EEEEeec-CC----------C--------------CCCcHHHHHHH
Q 010144 160 EMDEIIFDTLDKLFARTDI-SPSE----ID----VLVVNVS-LF----------S--------------PAPSLTSRIIN 205 (517)
Q Consensus 160 ea~~la~~Aa~~aL~~agi-~p~d----ID----~LI~a~s-~~----------~--------------~~Ps~a~~I~~ 205 (517)
-...++..++.+||+++|+ +|.+ |+ .++++++ .+ . ..-..+++|..
T Consensus 1210 p~~~l~L~aa~eAL~dAGi~dp~e~~~~i~~s~vGv~vGs~~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~is~ 1289 (1887)
T 2uv8_A 1210 PITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNM 1289 (1887)
T ss_dssp HHHHHHHHHHHHHHHHTTCSSGGGHHHHSCGGGEEECCEESSCCHHHHHHHHTTTTTTCCCCTTHHHHHSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCChhhhhcccCCceeEEEeccCCccHHHHHHHHHHHHhcCCCCcchhhcchhhHHHHHHHH
Confidence 3467999999999999999 4766 32 3333332 11 0 11234677777
Q ss_pred H-cCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCC---------CCC----------------
Q 010144 206 R-YNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN---------WYC---------------- 259 (517)
Q Consensus 206 ~-LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~---------~~~---------------- 259 (517)
. ||+++ +++.+.+ +|++++.||++|.+.|++|..+.+||.+.|.++.. ...
T Consensus 1290 ~~lgl~G--P~~tv~t-ACASsl~Al~~A~~~I~sG~advaLvGGvd~~~~~~~~~f~~m~als~~~~e~~~g~~p~~~~ 1366 (1887)
T 2uv8_A 1290 LLISSSG--PIKTPVG-ACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSFEFGNMKATSNTLEEFEHGRTPAEMS 1366 (1887)
T ss_dssp HTTCCCS--CCCCCCC-GGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHHTTCBCCHHHHHHTTCCGGGSC
T ss_pred HHcCCcc--ceEEeec-ccccHHHHHHHHHHHHHcCCCCEEEEeeeccCChHHHHHHHHhhhhccchhhhcccCCCccCc
Confidence 4 99974 8899998 99999999999999999999999999999986531 000
Q ss_pred -CCCccccccccccccceEEEEEeeccc
Q 010144 260 -GREKSMMLSNILFRSGGCSMLLTNNRA 286 (517)
Q Consensus 260 -~~dr~~lv~~~lfGDGAAAvLLs~~~~ 286 (517)
+.|... ..+..||||+++||.+...
T Consensus 1367 RPfd~~r--~Gfv~gEGag~vVL~~~~~ 1392 (1887)
T 2uv8_A 1367 RPATTTR--NGFMEAQGAGIQIIMQADL 1392 (1887)
T ss_dssp CTTBTTC--CSBCBBCEEEEEEEEEHHH
T ss_pred CCCcccC--CCcccccceEEEEEccHHH
Confidence 011110 2567899999999998543
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=1.6e-05 Score=96.24 Aligned_cols=123 Identities=10% Similarity=0.087 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHHHhCCCC-CCC----cC----EEEEeec-CC-------------------CCC----C-cHHHHHHH-
Q 010144 161 MDEIIFDTLDKLFARTDIS-PSE----ID----VLVVNVS-LF-------------------SPA----P-SLTSRIIN- 205 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~-p~d----ID----~LI~a~s-~~-------------------~~~----P-s~a~~I~~- 205 (517)
...++..++.+||+++|++ |.+ |+ .++++++ .+ +.. + .++++|..
T Consensus 1186 ~~~l~L~aa~eAL~~AGi~~p~e~~~~i~~s~vGv~vGsg~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~vs~~ 1265 (1878)
T 2uv9_A 1186 VTLYVLVSVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYLDKPVQKDILQESFVNTMAAWVNML 1265 (1878)
T ss_dssp HHHHHHHHHHHHHHTTTCSSGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHTTTTTTCCCCSCTTGGGSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCChhhhhcccCccceEEEEccCCccHHHHHHHHHHHHhcCCCCchhhhcchHHHHHHHHHHH
Confidence 4678999999999999998 765 22 3444432 11 011 1 24677777
Q ss_pred HcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCC---------CCC-----------CCCccc
Q 010144 206 RYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN---------WYC-----------GREKSM 265 (517)
Q Consensus 206 ~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~---------~~~-----------~~dr~~ 265 (517)
.||+++ +++.+.+ +|++++.||++|.+.|++|..+.+||.+.|.++.. ... +..+..
T Consensus 1266 ~lg~~G--P~~tv~t-ACASsl~Al~~A~~~I~sG~advalvGGvd~~~~~~~~~f~~m~als~~~de~a~g~~p~~~~R 1342 (1878)
T 2uv9_A 1266 LLSSTG--PIKTPVG-ACATAVESLDVGYDTIMQGKARVCLVGGFDDFQEEGSYEFANMGATSNAKEEFARGREPGEMSR 1342 (1878)
T ss_dssp TCCCCC--CBCCBCC-GGGHHHHHHHHHHHHHTTTSCSEEEEEEEECCCHHHHHHHHHHTCBCCHHHHHTTTCCTTSSCC
T ss_pred hcCCCC--CeEEEcC-cchHHHHHHHHHHHHHHcCCCCEEEEeeeccCChHHHHHHHHhhhhccchhhhhcCCCcccCcC
Confidence 499975 8889998 99999999999999999999999999999986531 000 001000
Q ss_pred ----cccccccccceEEEEEeeccc
Q 010144 266 ----MLSNILFRSGGCSMLLTNNRA 286 (517)
Q Consensus 266 ----lv~~~lfGDGAAAvLLs~~~~ 286 (517)
--..+..||||+++||.+...
T Consensus 1343 Pfd~~r~Gfv~gEGag~vVL~~~~~ 1367 (1878)
T 2uv9_A 1343 PTSTTRNGFMESQGCGVQVIMTAQL 1367 (1878)
T ss_dssp SSBTTCCCBCBBCEEEEEEEEEHHH
T ss_pred CCccCCCCCcccceeEEEEEeeHHH
Confidence 002578999999999998543
|
| >3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=93.60 E-value=0.16 Score=51.14 Aligned_cols=87 Identities=9% Similarity=0.123 Sum_probs=58.8
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEE---ecCCcchHHHHHHHHHHH
Q 010144 159 SEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFN---LSGMGCSASVVAVDLVQQ 235 (517)
Q Consensus 159 ~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~d---l~~mgCsggl~AL~lA~~ 235 (517)
+.+.+.+.++++++|+++|++++|||.++.... .+.+-..++++||++++-...+ .+++++++...+|+.+.+
T Consensus 220 ~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~----~~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sasi~~~L~~~~~ 295 (323)
T 3il3_A 220 KLAVRELSNVVEETLLANNLDKKDLDWLVPHQA----NLRIITATAKKLEMDMSQVVVTLDKYANNSAATVPVALDEAIR 295 (323)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCTTTCCEEEECCS----CHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCC----CHHHHHHHHHHcCcCHHHhhccHhhcCchHHHHHHHHHHHHHH
Confidence 445666778999999999999999998876532 2455678899999985533333 356677777777765532
Q ss_pred HHHcCCCCEEEEEE
Q 010144 236 LFRTYKNKLAIVVS 249 (517)
Q Consensus 236 lL~ag~~~~aLVVs 249 (517)
-=+..+.+++|+++
T Consensus 296 ~g~~~~Gd~vll~~ 309 (323)
T 3il3_A 296 DGRIQRGQLLLLEA 309 (323)
T ss_dssp TTSSCTTCEEEEEE
T ss_pred cCCCCCCCEEEEEE
Confidence 11112346666665
|
| >4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} | Back alignment and structure |
|---|
Probab=93.03 E-value=0.18 Score=51.03 Aligned_cols=87 Identities=6% Similarity=0.094 Sum_probs=60.0
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEE----EecCCcchHHHHHHHHHH
Q 010144 159 SEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAF----NLSGMGCSASVVAVDLVQ 234 (517)
Q Consensus 159 ~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~----dl~~mgCsggl~AL~lA~ 234 (517)
+.+.....++++++|+++|++++|||.++... ..+..-..++++||++++-... +.+++++++...+|+.+.
T Consensus 245 ~~a~~~~~~~i~~~L~~~gl~~~did~~v~Hq----~~~~i~~~~~~~Lgl~~~~~~~~~l~~~GNtssasi~~~L~~~~ 320 (350)
T 4ewp_A 245 RWAVWSMAKVAREALDAAGVEPEDLAAFIPHQ----ANMRIIDEFAKQLKLPESVVVARDIADAGNTSAASIPLAMHRLL 320 (350)
T ss_dssp HHHHHTHHHHHHHHHHHHTCCGGGEEEEEECC----SCHHHHHHHHHHTTCCTTSEECCTHHHHCBCGGGHHHHHHHHHH
T ss_pred HHHHHhhhHHHHHHHHhhcCChhHhceEEecC----CCHHHHHHHHHHcCcChHhEEecccccccchHHHHHHHHHHHHH
Confidence 44556677899999999999999999987643 2244567789999998654322 247778888888886554
Q ss_pred HHHHcCCCCEEEEEE
Q 010144 235 QLFRTYKNKLAIVVS 249 (517)
Q Consensus 235 ~lL~ag~~~~aLVVs 249 (517)
+-=+..+.+++|+++
T Consensus 321 ~~g~~~~Gd~vll~~ 335 (350)
T 4ewp_A 321 EENPELSGGLALQIG 335 (350)
T ss_dssp HHCGGGTTSEEEEEE
T ss_pred HhCCCCCcCEEEEEE
Confidence 321122456677665
|
| >1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=92.95 E-value=0.23 Score=50.04 Aligned_cols=82 Identities=7% Similarity=0.150 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCC-eeEE---EecCCcchHHHHHHHHHHHH
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRND-IKAF---NLSGMGCSASVVAVDLVQQL 236 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~-~~~~---dl~~mgCsggl~AL~lA~~l 236 (517)
+.+-..++.+++|+++|++++|||.++...+. ...-..+.+.||++.+ -... +++++++++...+|..+
T Consensus 229 ~~~~~~~~i~~aL~~agl~~~did~v~~H~~~----~~~~d~i~~~lg~~~~~~~~~~~~~~Gn~~sAs~~~~L~~~--- 301 (339)
T 1mzj_A 229 AVADVVPAAREALEVAGLTVGDLVAFVPHQAN----LRIIDVLVDRLGVPEHVVVSRDAEDTGNTSSASVALALDRL--- 301 (339)
T ss_dssp HHHHHHHHHHHHHHTTTCCGGGCSEEEECCSC----HHHHHHHHHHHTCCTTSEECCTHHHHCBCTTHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHhCCCccceeeehhhhcCchHHHHHHHHHHHH---
Confidence 34567789999999999999999998765321 1223358899999754 2211 35667777777777644
Q ss_pred HHcC---CCCEEEEEE
Q 010144 237 FRTY---KNKLAIVVS 249 (517)
Q Consensus 237 L~ag---~~~~aLVVs 249 (517)
++.+ +.+++|+++
T Consensus 302 ~~~g~~~~G~~vll~~ 317 (339)
T 1mzj_A 302 VRSGAVPGGGPALMIG 317 (339)
T ss_dssp HHHTSSCTTCEEEEEE
T ss_pred HHcCCCCCCCEEEEEE
Confidence 3333 345666654
|
| >2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=92.46 E-value=0.18 Score=50.65 Aligned_cols=82 Identities=10% Similarity=0.140 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEE---EecCCcchHHHHHHHHHHHHH
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAF---NLSGMGCSASVVAVDLVQQLF 237 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~---dl~~mgCsggl~AL~lA~~lL 237 (517)
+.+...++.+++|+++|++++|||.++...+ ....-..+.++||++.+-... ..+++++++...+|+.+ +
T Consensus 222 ~~~~~~~~i~~aL~~agl~~~did~~~~H~~----~~~~~d~~~~~lg~~~~~~~~~~~~~Gnt~sAs~~~~L~~~---~ 294 (331)
T 2x3e_A 222 AVTQMSDSVRRVLDRVGWQASDLHHLVPHQA----NTRILAAVADQLDLPVERVVSNIAEVGNTVAASIPLALAHG---L 294 (331)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECCC----CHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCC----CHHHHHHHHHHcCCCHHHHhhhHhhhCcHHHHHHHHHHHHH---H
Confidence 3456778999999999999999999876432 112334588899986432221 45666777777777644 3
Q ss_pred HcC---CCCEEEEEE
Q 010144 238 RTY---KNKLAIVVS 249 (517)
Q Consensus 238 ~ag---~~~~aLVVs 249 (517)
+.+ +.+++|+++
T Consensus 295 ~~~~~~~G~~vll~~ 309 (331)
T 2x3e_A 295 RQGILRDGGNMVLTG 309 (331)
T ss_dssp HTTCSCTTCEEEEEE
T ss_pred HhCCCCCCCEEEEEE
Confidence 443 345666655
|
| >1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A | Back alignment and structure |
|---|
Probab=92.38 E-value=0.34 Score=48.43 Aligned_cols=84 Identities=15% Similarity=0.216 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCC-eeEE---EecCCcchHHHHHHHHHHHHH
Q 010144 162 DEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRND-IKAF---NLSGMGCSASVVAVDLVQQLF 237 (517)
Q Consensus 162 ~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~-~~~~---dl~~mgCsggl~AL~lA~~lL 237 (517)
.+-..++++++|+++|++++|||.++...+ .+..-..+.+.||++++ .... ..+++++++...+|+.+.+--
T Consensus 231 ~~~~~~~i~~al~~agl~~~dId~~~~H~~----~~~~~~~~~~~lg~~~~~~~~~~~~~~Gnt~sAs~~~~L~~~~~~~ 306 (335)
T 1u6e_A 231 AFKMGDVGRRAMDAAGVRPDQIDVFVPHQA----NSRINELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAELLTTG 306 (335)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEECCS----CHHHHHHHHHHHTCCTTCEECCTHHHHCBCGGGHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCchhhhhhhhhhhCcHHHHHHHHHHHHHHHcC
Confidence 456778899999999999999999876431 12333457889998755 2221 244567777766665553321
Q ss_pred HcCCCCEEEEEE
Q 010144 238 RTYKNKLAIVVS 249 (517)
Q Consensus 238 ~ag~~~~aLVVs 249 (517)
+..+.+++|+++
T Consensus 307 ~~~~g~~~l~~~ 318 (335)
T 1u6e_A 307 AAKPGDLALLIG 318 (335)
T ss_dssp SSCTTCEEEEEE
T ss_pred CCCCCCEEEEEE
Confidence 122345666665
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A | Back alignment and structure |
|---|
Probab=91.98 E-value=0.27 Score=49.79 Aligned_cols=88 Identities=11% Similarity=0.106 Sum_probs=59.6
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEE---EecCCcchHHHHHHHHHHH
Q 010144 159 SEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAF---NLSGMGCSASVVAVDLVQQ 235 (517)
Q Consensus 159 ~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~---dl~~mgCsggl~AL~lA~~ 235 (517)
+.+.....++++++|+++|++++|||.++.... -+.+-..++++||++++-... +.+++++++...+|+.+.+
T Consensus 242 ~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~----~~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sasi~~~L~~~~~ 317 (345)
T 3s21_A 242 IEGIKLAQKTFVAAKQVLGWAVEELDQFVIHQV----SRPHTAAFVKSFGIDPAKVMTIFGEHGNIGPASVPIVLSKLKE 317 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGGCSEEEECCS----CHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCC----CHHHHHHHHHHcCcCHHHceeeHhhcCchHHHHHHHHHHHHHH
Confidence 445667778889999999999999999986432 234567889999998543222 3466777777777766544
Q ss_pred HHHcCCCCEEEEEEe
Q 010144 236 LFRTYKNKLAIVVST 250 (517)
Q Consensus 236 lL~ag~~~~aLVVs~ 250 (517)
-=+..+.+++|+++.
T Consensus 318 ~g~~~~Gd~vll~~~ 332 (345)
T 3s21_A 318 LGRLKKGDRIALLGI 332 (345)
T ss_dssp HTCCCTTCEEEEEEE
T ss_pred cCCCCCCCEEEEEEE
Confidence 211234566776663
|
| >3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A | Back alignment and structure |
|---|
Probab=91.94 E-value=0.25 Score=50.44 Aligned_cols=91 Identities=13% Similarity=0.239 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCe-------eEEEecCC--------cchH
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDI-------KAFNLSGM--------GCSA 225 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~-------~~~dl~~m--------gCsg 225 (517)
....++++.++.|+++|++|+|+|.|+..-- ...--.+...+.+++|++.+- .-||-.+. ||++
T Consensus 205 maPaA~~ti~~~l~d~g~~~~d~D~ivtgdL-~q~g~~il~~l~~~~g~~~~~~~~dcg~~iy~~~~~~~~ggsg~~csa 283 (347)
T 3lma_A 205 MAPAAADTIKQHLEDLGRTPDDYDLILTGDL-SGVGSPILKDLLKEEGINVGTKHNDCGLMIYTPDQQVFAGGSGCACSA 283 (347)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEEESC-HHHHHHHHHHHHHHTTCCCGGGEEEGGGTSSCC---------CCCCHH
T ss_pred chHHHHHHHHHHHHHhCCCHHHcCEEecCCh-HHHHHHHHHHHHHHcCCChhHCccccceEEecCCCcccCCCCccccHH
Confidence 3456777889999999999999999985310 000113456677888887421 22344444 8888
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEEEecCC
Q 010144 226 SVVAVDLVQQLFRTYKNKLAIVVSTESM 253 (517)
Q Consensus 226 gl~AL~lA~~lL~ag~~~~aLVVs~E~~ 253 (517)
.+..=.+-.. |+.|..+++|+|++-..
T Consensus 284 ~v~~~~~~~~-~~~g~~~ril~~~tGal 310 (347)
T 3lma_A 284 VVTFAHIFKE-IEAGRLNRVLVVATGAL 310 (347)
T ss_dssp HHHHHTHHHH-HHTTSCSEEEEEEEEEC
T ss_pred HHHHHHHHHH-HhcCcccEEEEEecccc
Confidence 8777666666 56678899999987764
|
| >3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* | Back alignment and structure |
|---|
Probab=91.92 E-value=0.24 Score=50.69 Aligned_cols=85 Identities=11% Similarity=0.234 Sum_probs=60.0
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEE---EecCCcchHHHHHHHHHHH
Q 010144 159 SEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAF---NLSGMGCSASVVAVDLVQQ 235 (517)
Q Consensus 159 ~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~---dl~~mgCsggl~AL~lA~~ 235 (517)
+.+.....++++++|+++|++++|||.+|... .-+.+-..++++||++++-... ..+++++++...+|+.+.+
T Consensus 250 ~~~~~~~~~~i~~~L~~~gl~~~did~~v~Hq----~n~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sAsi~l~L~~~~~ 325 (359)
T 3h78_A 250 EHASQTLVRIAGEMLAAHELTLDDIDHVICHQ----PNLRILDAVQEQLGIPQHKFAVTVDRLGNMASASTPVTLAMFWP 325 (359)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGCSEEEECC----SCHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCcCHHHhhhhhhcccchHHHHHHHHHHHHHH
Confidence 34566677899999999999999999987643 2245567889999998543322 3356778888888876644
Q ss_pred HHHcCCCCEEEEEE
Q 010144 236 LFRTYKNKLAIVVS 249 (517)
Q Consensus 236 lL~ag~~~~aLVVs 249 (517)
- ..+.+++|+++
T Consensus 326 ~--l~~Gd~vll~~ 337 (359)
T 3h78_A 326 D--IQPGQRVLVLT 337 (359)
T ss_dssp G--SCTTCEEEEEE
T ss_pred h--CCCCCEEEEEE
Confidence 3 34456777666
|
| >4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=91.80 E-value=0.19 Score=51.24 Aligned_cols=85 Identities=5% Similarity=0.047 Sum_probs=60.6
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEE---EecCCcchHHHHHHHHHHH
Q 010144 159 SEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAF---NLSGMGCSASVVAVDLVQQ 235 (517)
Q Consensus 159 ~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~---dl~~mgCsggl~AL~lA~~ 235 (517)
+.+.+...++++++|+++|++++|||.++.... -+.+-..++++||++++-... +.+++++++...+|+.+.+
T Consensus 240 ~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~----~~~i~~~~~~~Lgl~~ek~~~~l~~~GNt~sasi~~~L~~~~~ 315 (354)
T 4efi_A 240 NFTLNAVPKLVSRTLDIAGRDKDSYDAFLFHQA----NLFMLKHLAKKAGLPAERVPVNIGEYGNTSCASIPLLITTELK 315 (354)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCC----CHHHHHHHHHHTTCCGGGSCCCHHHHCBCGGGHHHHHHHHHSH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCC----CHHHHHHHHHHhCcCHHHHHHHHhhhCcHHHHHHHHHHHHHHH
Confidence 345677788999999999999999999877542 234567789999998543322 3466788888888876633
Q ss_pred --HHHcCCCCEEEEEE
Q 010144 236 --LFRTYKNKLAIVVS 249 (517)
Q Consensus 236 --lL~ag~~~~aLVVs 249 (517)
.++ +.+++|+++
T Consensus 316 ~g~~~--~Gd~vll~~ 329 (354)
T 4efi_A 316 DRLKE--ETLQLGMFG 329 (354)
T ss_dssp HHHHH--SCEEEEEEE
T ss_pred hCCCC--CCCEEEEEE
Confidence 343 345677766
|
| >3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A | Back alignment and structure |
|---|
Probab=91.63 E-value=0.23 Score=50.89 Aligned_cols=84 Identities=10% Similarity=0.073 Sum_probs=57.6
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEE---EecCCcchHHHHHHHHHHH
Q 010144 159 SEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAF---NLSGMGCSASVVAVDLVQQ 235 (517)
Q Consensus 159 ~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~---dl~~mgCsggl~AL~lA~~ 235 (517)
+.+...+.++++++|+++|++++|||.+|... .-+.+-..++++||++++-... +.+++++++-..+|+.+
T Consensus 262 ~~~~~~~~~~i~~~L~~~gl~~~did~~v~Hq----~n~~i~~~~~~~Lgl~~ek~~~~l~~~GNtssAsipl~L~~~-- 335 (365)
T 3gwa_A 262 AFSLAEVPRAADRLLALAGEPRENIDCFVLHQ----ANRFMLDALRKKMKIPEHKFPVLMEHCGNTVSSTLPLALETM-- 335 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCSEEEECC----CCHHHHHHHHHHHTCCGGGSCCCCTTTCBCGGGHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcC----CCHHHHHHHHHHhCCCHHHHHHHHhcccchHHHHHHHHHHHH--
Confidence 34566677889999999999999999998643 2244567889999998543333 34556667777666544
Q ss_pred HHHcC---CCCEEEEEE
Q 010144 236 LFRTY---KNKLAIVVS 249 (517)
Q Consensus 236 lL~ag---~~~~aLVVs 249 (517)
++.+ +.+++|+++
T Consensus 336 -~~~g~~~~Gd~vll~~ 351 (365)
T 3gwa_A 336 -RANGTLARGMRLMLLG 351 (365)
T ss_dssp -HHTTCCCTTCEEEEEE
T ss_pred -HHcCCCCCCCEEEEEE
Confidence 4443 346666665
|
| >4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=91.61 E-value=0.32 Score=48.87 Aligned_cols=84 Identities=10% Similarity=0.164 Sum_probs=57.3
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEE---EecCCcchHHHHHHHHHHH
Q 010144 159 SEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAF---NLSGMGCSASVVAVDLVQQ 235 (517)
Q Consensus 159 ~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~---dl~~mgCsggl~AL~lA~~ 235 (517)
+.+.+...++++++|+++|++++|||.++.... .+.+-..++++||++++-... ..+++++++...+|+.+
T Consensus 230 ~~~~~~~~~~i~~~l~~~gl~~~did~~~~Hq~----~~~i~~~~~~~lgl~~~~~~~~l~~~GNt~sasi~~~L~~~-- 303 (333)
T 4dfe_A 230 KLAVNVLEKVAVEALEKANLSAEQIDWLIPHQA----NIRIMQSTCRKLGLPQERMIVTVGEHGNTSAASIPLALDVA-- 303 (333)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCS----CHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCC----CHHHHHHHHHHhCCCHHHhhhhHHhcCchHHHHHHHHHHHH--
Confidence 344566778899999999999999998876431 234567889999998543322 23566777777777654
Q ss_pred HHHcC---CCCEEEEEE
Q 010144 236 LFRTY---KNKLAIVVS 249 (517)
Q Consensus 236 lL~ag---~~~~aLVVs 249 (517)
++.+ +.+++|+++
T Consensus 304 -~~~g~~~~Gd~vll~~ 319 (333)
T 4dfe_A 304 -VRDGRIKRGQNVLIEG 319 (333)
T ss_dssp -HHTTCSCTTCEEEEEE
T ss_pred -HHcCCCCCCCEEEEEE
Confidence 3343 345666665
|
| >1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A | Back alignment and structure |
|---|
Probab=91.22 E-value=0.43 Score=47.14 Aligned_cols=82 Identities=10% Similarity=0.247 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEE---EecCCcchHHHHHHHHHHHHH
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAF---NLSGMGCSASVVAVDLVQQLF 237 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~---dl~~mgCsggl~AL~lA~~lL 237 (517)
+.+-..++++++|+++|++|+|||.++...+ .+..-..+.+.||++.+-... .++++++++.+.+|..+ +
T Consensus 210 ~~~~~~~~i~~al~~agl~~~did~~~~H~~----~~~~~d~~~~~lg~~~~~~~~~~~~~Gh~~~as~~~~L~~~---~ 282 (313)
T 1zow_A 210 AVRIMGDASTRVVEKANLTSDDIDLFIPHQA----NIRIMESARERLGISKDKMSVSVNKYGNTSAASIPLSIDQE---L 282 (313)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCSEEEECCS----CHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCC----CHHHHHHHHHHhCCCHHHHHHhHhhhCchHHHHHHHHHHHH---H
Confidence 3456678999999999999999999876432 112234477888986432211 34556777777777554 3
Q ss_pred HcC---CCCEEEEEE
Q 010144 238 RTY---KNKLAIVVS 249 (517)
Q Consensus 238 ~ag---~~~~aLVVs 249 (517)
+.+ +.+++|+++
T Consensus 283 ~~~~~~~g~~vl~~~ 297 (313)
T 1zow_A 283 KNGKLKDDDTIVLVG 297 (313)
T ss_dssp HTTCCCTTCEEEEEE
T ss_pred HcCCCCCCCEEEEEE
Confidence 333 345666554
|
| >1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* | Back alignment and structure |
|---|
Probab=91.10 E-value=0.42 Score=47.34 Aligned_cols=84 Identities=14% Similarity=0.131 Sum_probs=55.4
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeE---EEecCCcchHHHHHHHHHHHH
Q 010144 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKA---FNLSGMGCSASVVAVDLVQQL 236 (517)
Q Consensus 160 ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~---~dl~~mgCsggl~AL~lA~~l 236 (517)
.+.+-..++.+++|+++|++|+|||.++...+. ...-..+.+.||++.+-.. -+++++++++.+.+|..+
T Consensus 215 ~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~----~~~~d~i~~~lg~~~~~~~~~~~~~Gn~~~As~~~~L~~~--- 287 (317)
T 1hnj_A 215 VAVTELAHIVDETLAANNLDRSQLDWLVPHQAN----LRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEA--- 287 (317)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSC----HHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCC----HHHHHHHHHHcCCCHHHhHhhHhhhCcHHHHHHHHHHHHH---
Confidence 344456789999999999999999998765321 1223468889998643211 135667778888777654
Q ss_pred HHcC---CCCEEEEEEe
Q 010144 237 FRTY---KNKLAIVVST 250 (517)
Q Consensus 237 L~ag---~~~~aLVVs~ 250 (517)
++.+ +.+++|+++.
T Consensus 288 ~~~~~~~~G~~vll~~~ 304 (317)
T 1hnj_A 288 VRDGRIKPGQLVLLEAF 304 (317)
T ss_dssp HHTTCSCTTCEEEEEEE
T ss_pred HHhCCCCCCCEEEEEEE
Confidence 3443 3567777653
|
| >2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=90.58 E-value=0.45 Score=46.86 Aligned_cols=82 Identities=6% Similarity=0.207 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEE---EecCCcchHHHHHHHHHHHHH
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAF---NLSGMGCSASVVAVDLVQQLF 237 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~---dl~~mgCsggl~AL~lA~~lL 237 (517)
+.+-..++++++|+++|++|+|||.++...+. ...-..+.+.||++++-... .++++++++++.+|..+ +
T Consensus 208 ~~~~~~~~i~~al~~agl~~~did~~~~H~~~----~~~~~~~~~~lg~~~~~~~~~~~~~Gh~~~As~~~~L~~~---~ 280 (309)
T 2ebd_A 208 AVRSMEEVCREVLEKAGVKPEEVSLVIPHQAN----VRIINALAEKLNIPKEKVFVNIQKYGNTSAASIPIALHEA---I 280 (309)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECCSC----HHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCC----HHHHHHHHHHhCCCHHHhhhhHhhhcchHHHHHHHHHHHH---H
Confidence 34456789999999999999999998764321 11234578899986422111 34566777777777654 3
Q ss_pred HcC---CCCEEEEEE
Q 010144 238 RTY---KNKLAIVVS 249 (517)
Q Consensus 238 ~ag---~~~~aLVVs 249 (517)
+.+ +.+++|+++
T Consensus 281 ~~g~~~~G~~~l~~~ 295 (309)
T 2ebd_A 281 KEGKVKRGDLILMTA 295 (309)
T ss_dssp HTTCCCTTCEEEEEE
T ss_pred HcCCCCCCCEEEEEE
Confidence 333 345666665
|
| >1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=90.46 E-value=0.42 Score=47.49 Aligned_cols=82 Identities=11% Similarity=0.138 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEE---EecCCcchHHHHHHHHHHHHH
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAF---NLSGMGCSASVVAVDLVQQLF 237 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~---dl~~mgCsggl~AL~lA~~lL 237 (517)
+.+-..++.+++|+++|++|+|||.++...+. ...-..+.+.||++.+-... .++++++++++.+|..+ +
T Consensus 218 ~~~~~~~~i~~al~~agl~~~did~~~~H~~~----~~~~d~~~~~lg~~~~~~~~~~~~~Gh~~~As~~~~l~~~---l 290 (322)
T 1ub7_A 218 AVRVMNTATLEAIEKAGLTPEDIRLFVPHQAN----LRIIDAARERLGLPWERVAVNVDRYGNTSTASIPLALKEA---V 290 (322)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECCSC----HHHHHHHHHTTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCC----HHHHHHHHHHcCCCHHHHHHHHHhhCcHHHHHHHHHHHHH---H
Confidence 34567789999999999999999998764321 11233578889986431111 35556677777766543 3
Q ss_pred HcC---CCCEEEEEE
Q 010144 238 RTY---KNKLAIVVS 249 (517)
Q Consensus 238 ~ag---~~~~aLVVs 249 (517)
+.+ +.+++|+++
T Consensus 291 ~~g~~~~g~~~l~~~ 305 (322)
T 1ub7_A 291 DAGRIREGDHVLLVS 305 (322)
T ss_dssp HHTSSCTTCEEEEEE
T ss_pred HhCCCCCCCEEEEEE
Confidence 443 234555544
|
| >1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=88.10 E-value=0.3 Score=50.17 Aligned_cols=67 Identities=10% Similarity=0.143 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCee------EEEecCCcchHHHHHHHHHH
Q 010144 163 EIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIK------AFNLSGMGCSASVVAVDLVQ 234 (517)
Q Consensus 163 ~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~------~~dl~~mgCsggl~AL~lA~ 234 (517)
+-.. +++++|+++|++++|||.++...+. ...-..+.++||++++-. .-..+++++++...+|+.+.
T Consensus 253 ~~~~-~i~~aL~~agl~~~dId~v~~H~~~----~~i~d~~~~~lgl~~~k~~~s~~~~~~~Gnt~sAsi~~~L~~~~ 325 (382)
T 1u0m_A 253 PLAP-ALKELAGEHGWDASDLDFYIVHAGG----PRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRLF 325 (382)
T ss_dssp HHHH-HHHHHHHTTSCCSSCCSCCEEECSH----HHHHHHHHHHSCSCGGGGHHHHHHHHHTCBCTTHHHHHHHHHHH
T ss_pred HHHH-HHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHH
Confidence 3344 8999999999999999998875321 123345788999875422 12455667777777765443
|
| >1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A | Back alignment and structure |
|---|
Probab=87.90 E-value=0.35 Score=49.82 Aligned_cols=82 Identities=7% Similarity=0.193 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeE------EEecCCcchHHHHHHHHHH
Q 010144 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKA------FNLSGMGCSASVVAVDLVQ 234 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~------~dl~~mgCsggl~AL~lA~ 234 (517)
+.+-..++++++|+++|++++|||.++...+ ....-..+.++||++.+-.. -+.+++++++...+|+.+
T Consensus 285 ~~~~~~~~i~~aL~~agl~~~dId~~~~H~~----~~~i~d~~~~~lgl~~~k~~~s~~~~~~~GNt~sAsi~~~L~~~- 359 (393)
T 1ted_A 285 IFSGVAPVVTEMLWDNGLQISDIDLWAIHPG----GPKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETM- 359 (393)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCSCEEECCS----CHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHcCCCHhHCCEEEECCC----cHHHHHHHHHHcCCCHHHHHHHHHHHHhhCCchHhHHHHHHHHH-
Confidence 3455677889999999999999998877432 12234567888998754321 245555566666666443
Q ss_pred HHHHcC----CCCEEEEEE
Q 010144 235 QLFRTY----KNKLAIVVS 249 (517)
Q Consensus 235 ~lL~ag----~~~~aLVVs 249 (517)
++.+ +.+++|+++
T Consensus 360 --~~~g~~~~~Gd~vll~~ 376 (393)
T 1ted_A 360 --VQQAESAKAISTGVAFA 376 (393)
T ss_dssp --HHSCSSSSSSEEEEEEE
T ss_pred --HhcCccCCCCCeEEEEE
Confidence 3443 335566655
|
| >1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=87.86 E-value=1.2 Score=45.86 Aligned_cols=93 Identities=15% Similarity=0.275 Sum_probs=54.5
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCCCeeEEEecC--------CcchHHHHHHHHHHH
Q 010144 165 IFDTLDKLFARTDISPSEIDVLVVN-VSLFSPAPSLTSRIINRYNLRNDIKAFNLSG--------MGCSASVVAVDLVQQ 235 (517)
Q Consensus 165 a~~Aa~~aL~~agi~p~dID~LI~a-~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~--------mgCsggl~AL~lA~~ 235 (517)
...|++++|+++|++|+|||++=.. +. ....-...+.||+.++-..+++++ .|++|....+.++.+
T Consensus 298 ~~~a~~~al~~Agl~~~dId~ie~heaf-----a~~~l~~~~~lg~~~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~ 372 (401)
T 1ulq_A 298 PVPATRKALERAGLSFSDLGLIELNEAF-----AAQALAVLREWSLSMEDQRLNPNGGAIALGHPLGASGARILTTLVHE 372 (401)
T ss_dssp HHHHHHHHHHHTTCCGGGCSEEEECCSB-----HHHHHHHHHHHTCCTTCTTBSTTCCHHHHCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEEecch-----HHHHHHHHHHcCCCCCCCccCCCCcccccCCCcchHHHHHHHHHHHH
Confidence 3689999999999999999988654 21 122233346688732222334332 144555555555554
Q ss_pred HHHcCCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEee
Q 010144 236 LFRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTN 283 (517)
Q Consensus 236 lL~ag~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~ 283 (517)
|- .++.+++|+ ..|.+|-.++|+||++
T Consensus 373 L~-~~~~~~gl~--------------------~~~~ggG~~~a~v~~~ 399 (401)
T 1ulq_A 373 MR-RRKVQFGLA--------------------TMCIGVGQGIAVVVEG 399 (401)
T ss_dssp HH-HTTCSEEEE--------------------EEEETTTEEEEEEEEE
T ss_pred Hh-hcCCCEEEE--------------------EeecCCcccEEEEEEe
Confidence 43 333333333 3466777778888875
|
| >3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* | Back alignment and structure |
|---|
Probab=87.77 E-value=0.26 Score=50.27 Aligned_cols=70 Identities=6% Similarity=0.107 Sum_probs=49.0
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCcCEEEE-eecCCCCCCcHHHHHHHHcCCCCCeeEEE----ecCCcchHHHHHHHHHH
Q 010144 160 EMDEIIFDTLDKLFARTDISPSEIDVLVV-NVSLFSPAPSLTSRIINRYNLRNDIKAFN----LSGMGCSASVVAVDLVQ 234 (517)
Q Consensus 160 ea~~la~~Aa~~aL~~agi~p~dID~LI~-a~s~~~~~Ps~a~~I~~~LGl~~~~~~~d----l~~mgCsggl~AL~lA~ 234 (517)
.+...+.++++++|+++|++++|||.+|+ ...... . ..++++||++.+-...+ .+++++++...+|+.+.
T Consensus 235 ~~~~~~~~~i~~~L~~~gl~~~did~~v~~hq~~~~-~----~~~~~~lgl~~ek~~~~~~~~~GNt~aAsipl~L~~~~ 309 (357)
T 3s3l_A 235 RYIDLLVAAKTQALEDAGTAIEDIAHAVIPVSRRGT-G----HELHDLLGLPDERTSWAYGRTTGHVGAGDQYAGLAHLV 309 (357)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSEEECCSCCCCS-S----CCHHHHHTSCGGGBTHHHHHHHCBCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHH-H----HHHHHHcCCCHHHhHHHhccccccchHhHHHHHHHHHH
Confidence 55667888999999999999999999996 332222 2 34678899975433322 45566777777776553
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=87.51 E-value=1.1 Score=46.17 Aligned_cols=91 Identities=16% Similarity=0.291 Sum_probs=58.8
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecC--------CcchHHHHHHHHHHHH
Q 010144 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSG--------MGCSASVVAVDLVQQL 236 (517)
Q Consensus 165 a~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~--------mgCsggl~AL~lA~~l 236 (517)
...|++++|+++|++|+|||++.+.- ........+.+.||+.+ ..+++++ .||+|....+.++.+|
T Consensus 296 ~~~ai~~al~~agl~~~dId~ve~~d----~fa~~~~~~~~~lg~~~--~~v~~~gg~~~~Gh~~gasG~~~~~~~~~~L 369 (395)
T 4e1l_A 296 PIPATRKALKKAGLSINDIDLIEANE----AFAAQALAVKNELQIDS--SKLNVNGGAIALGHPIGASGARILVTLIYEM 369 (395)
T ss_dssp HHHHHHHHHHHTTCCGGGCSEEEECC----SBHHHHHHHHHHHTCCG--GGBSTTCCHHHHCCCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecC----hhHHHHHHHHHHhCCCC--CCCCcCCchhhcCCcHHHHHHHHHHHHHHHH
Confidence 35789999999999999999998632 22345566788899863 2233332 2577766667766666
Q ss_pred HHcCCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEe
Q 010144 237 FRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLT 282 (517)
Q Consensus 237 L~ag~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs 282 (517)
-..+ .++.|+ +.|.-|-.+.|+||+
T Consensus 370 ~~~~-~~~gl~--------------------~~c~ggG~g~a~~~e 394 (395)
T 4e1l_A 370 QKRK-VETGLA--------------------TLCIGGGQGISMVVS 394 (395)
T ss_dssp HHHT-CSEEEE--------------------EEESSTTEEEEEEEE
T ss_pred HhcC-CCEEEE--------------------EEccCCCceEEEEEe
Confidence 5443 344443 235556666677765
|
| >3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=86.67 E-value=1.2 Score=46.14 Aligned_cols=91 Identities=16% Similarity=0.345 Sum_probs=58.1
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecC--------CcchHHHHHHHHHHHHH
Q 010144 166 FDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSG--------MGCSASVVAVDLVQQLF 237 (517)
Q Consensus 166 ~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~--------mgCsggl~AL~lA~~lL 237 (517)
..|++++|+++|++|+|||++-..-. .........+.||+.+ ..+++++ .|++|....+.++.+|=
T Consensus 308 ~~a~~~al~~Agl~~~dId~~e~hda----f~~~~l~~~~~lg~~~--~~vn~~Gg~~~~GHp~gasG~~~~~~~~~~L~ 381 (407)
T 3svk_A 308 TPATRKVLDRAGLTIDDIDLFELNEA----FASVVLKFQKDLNIPD--EKLNVNGGAIAMGHPLGATGAMITGTMVDELE 381 (407)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEECCS----BHHHHHHHHHHHTCCG--GGBSTTCCHHHHCBCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEeCh----hHHHHHHHHHHhCCCC--CCCCCCCcHhheeCcHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999976521 1223445678899863 2344443 24566666666666664
Q ss_pred HcCCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEee
Q 010144 238 RTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTN 283 (517)
Q Consensus 238 ~ag~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~ 283 (517)
..+ .+++|+ +.|..|-.+.|+||++
T Consensus 382 ~~~-~~~gl~--------------------~~c~ggG~g~a~~~e~ 406 (407)
T 3svk_A 382 RRN-ARRALI--------------------TLCIGGGMGVATIIER 406 (407)
T ss_dssp HHT-CCEEEE--------------------EEECSSSCEEEEEEEE
T ss_pred hcC-CCEEEE--------------------EeeccCcceEEEEEEc
Confidence 432 334433 3456666777777764
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... | Back alignment and structure |
|---|
Probab=86.31 E-value=1.2 Score=45.79 Aligned_cols=76 Identities=13% Similarity=0.215 Sum_probs=47.1
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecC--------CcchHHHHHHHHHHHH
Q 010144 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSG--------MGCSASVVAVDLVQQL 236 (517)
Q Consensus 165 a~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~--------mgCsggl~AL~lA~~l 236 (517)
...|++++|+++|++|+|||++-.+ ......+-.+.+.||+.++ .+++++ .|++|....+.++.+|
T Consensus 292 ~~~a~~~al~~agl~~~dId~ie~~----d~f~~~~l~~~~~lg~~~~--~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L 365 (392)
T 2vu1_A 292 PIPASRKALERAGWKIGDLDLVEAN----EAFAAQACAVNKDLGWDPS--IVNVNGGAIAIGHPIGASGARILNTLLFEM 365 (392)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEEC----CSBHHHHHHHHHHHCCCGG--GBSTTCCHHHHCCCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEec----cccHHHHHHHHHHcCCCcc--cCCCCccHhhhCCChhhHHHHHHHHHHHHH
Confidence 3679999999999999999998754 1223334446788898632 233322 2455556556666554
Q ss_pred HHcCCCCEEEE
Q 010144 237 FRTYKNKLAIV 247 (517)
Q Consensus 237 L~ag~~~~aLV 247 (517)
-. ...+++|+
T Consensus 366 ~~-~~~~~gl~ 375 (392)
T 2vu1_A 366 KR-RGARKGLA 375 (392)
T ss_dssp HH-HTCSEEEE
T ss_pred hc-cCCCEEEE
Confidence 43 33445554
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=85.94 E-value=0.99 Score=46.49 Aligned_cols=92 Identities=20% Similarity=0.303 Sum_probs=57.5
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecC--------CcchHHHHHHHHHHHH
Q 010144 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSG--------MGCSASVVAVDLVQQL 236 (517)
Q Consensus 165 a~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~--------mgCsggl~AL~lA~~l 236 (517)
...|++++|+++|++|+|||++.+.- ........+.+.||+.+ ..+++++ .||+|....+.++.+|
T Consensus 294 ~~~a~~~al~~agl~~~dId~ve~~d----~fa~~~~~~~~~lg~~~--~~v~~~gg~~~~GH~~gasG~~~~~~~~~~L 367 (394)
T 3ss6_A 294 PAPAIRKGLEKVDWSLEDADLLEINE----AFAAQYLAVEKELDLDR--EKVNVNGSGVGLGHPIGCTGARITVSLIHEL 367 (394)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECC----SBHHHHHHHHHHHTCCG--GGBSTTCCHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEeCC----chHHHHHHHHHHhCCCC--CCCCCCcchHhhCCcHHHHHHHHHHHHHHHH
Confidence 36789999999999999999998542 12345567788899863 2344443 1355555555555555
Q ss_pred HHcCCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEee
Q 010144 237 FRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTN 283 (517)
Q Consensus 237 L~ag~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~ 283 (517)
-.. ..++.|+ +.|.-|-.+.|+||++
T Consensus 368 ~~~-~~~~gl~--------------------~~c~ggG~g~a~~~e~ 393 (394)
T 3ss6_A 368 KRR-GLEKGIA--------------------SLCVGGGIGVALFIEA 393 (394)
T ss_dssp HHH-TCCEEEE--------------------EEEETTTEEEEEEEEE
T ss_pred Hhc-CCCEEEE--------------------EEccCcCceeEEEEEc
Confidence 433 2344443 2455566667777764
|
| >3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=84.70 E-value=1.1 Score=46.28 Aligned_cols=86 Identities=13% Similarity=0.207 Sum_probs=55.4
Q ss_pred HhhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHc-CC--CCCeeEE---EecCCcchHHHHHHH
Q 010144 158 FSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRY-NL--RNDIKAF---NLSGMGCSASVVAVD 231 (517)
Q Consensus 158 ~~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~L-Gl--~~~~~~~---dl~~mgCsggl~AL~ 231 (517)
.+.+...+.++++++|+++|++++|||.+|... .-+.+-..++++| |+ +.+-... +.+++++++...+|+
T Consensus 286 ~~~a~~~~~~~i~~~L~~~gl~~~dId~~v~Hq----an~~i~~~~~~~llgl~~~~~k~~~~l~~~GNtssAsipl~L~ 361 (392)
T 3led_A 286 FKEVVPLVSEMIIEHAREIGIDPHGLKRMWLHQ----ANINMNEIIGRKVLGRDPTRDENVIILDDYANTSSAGSIIAFH 361 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECS----SCHHHHHHHHHHHHTSCCCTTTBCCCHHHHCBCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEcC----CCHHHHHHHHHHhcCCCCCHHHHHHHHhhhCccHHHHHHHHHH
Confidence 345677788899999999999999999887533 1234556777885 75 2221111 346677788888887
Q ss_pred HHHHHHHcCCCCEEEEEE
Q 010144 232 LVQQLFRTYKNKLAIVVS 249 (517)
Q Consensus 232 lA~~lL~ag~~~~aLVVs 249 (517)
.+...+ .+.+++|+++
T Consensus 362 ~~~~~~--~~Gd~vll~g 377 (392)
T 3led_A 362 KHQDDM--AQGDLGLICS 377 (392)
T ss_dssp HCCTTC--CTTCEEEEEE
T ss_pred HHhCCC--CCCCEEEEEE
Confidence 642211 2335555554
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=84.25 E-value=1.3 Score=45.54 Aligned_cols=92 Identities=16% Similarity=0.303 Sum_probs=57.9
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecC--------CcchHHHHHHHHHHHH
Q 010144 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSG--------MGCSASVVAVDLVQQL 236 (517)
Q Consensus 165 a~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~--------mgCsggl~AL~lA~~l 236 (517)
...|++++|+++|++|+|||++-+.- ..+.....+.+.||+.+ ..+++++ .||+|....+.++.+|
T Consensus 297 ~~~a~~~al~~Agl~~~dId~ve~~d----~f~~~~~~~~~~lg~~~--~~~n~~gg~~~~GH~~gasG~~~~~~~~~~L 370 (396)
T 4dd5_A 297 PVPATKKALEAANMTIEDIDLVEANE----AFAAQSVAVIRDLNIDM--NKVNVNGGAIAIGHPIGCSGARILTTLLYEM 370 (396)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECC----SBHHHHHHHHHHHTCCT--TSBSTTCCHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecC----hHHHHHHHHHHHhCCCC--CccCCCCchhhccCcHHHHHHHHHHHHHHHH
Confidence 46789999999999999999997532 12344556778888763 1233332 1455555555555555
Q ss_pred HHcCCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEee
Q 010144 237 FRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTN 283 (517)
Q Consensus 237 L~ag~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~ 283 (517)
-..+ .+++| .+.|..|-.++|+||++
T Consensus 371 ~~~~-~~~gl--------------------~~~c~ggG~g~a~~~e~ 396 (396)
T 4dd5_A 371 KRRD-AKTGL--------------------ATLCIGGGMGTTLIVKR 396 (396)
T ss_dssp HHHT-CSEEE--------------------EEEEETTTEEEEEEEEC
T ss_pred HhcC-CCeEE--------------------EEEcccCCceeEEEEeC
Confidence 4432 33333 34577777788888863
|
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} | Back alignment and structure |
|---|
Probab=82.95 E-value=1.9 Score=49.57 Aligned_cols=78 Identities=13% Similarity=0.135 Sum_probs=57.4
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeE------EEecCCcchHHHHHHHH
Q 010144 159 SEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKA------FNLSGMGCSASVVAVDL 232 (517)
Q Consensus 159 ~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~------~dl~~mgCsggl~AL~l 232 (517)
+.+.+.+.++++++|+++|++++|||.++.... ...+-..+.++||++.+-.. -..+++++++...+|+.
T Consensus 860 ~~~~~~~~~~~~~al~~agl~~~did~~~~Hq~----~~~i~~~~~~~lgl~~~k~~~~~~~l~~~GNtssasi~~~L~~ 935 (979)
T 3tsy_A 860 TLISENVEKCLTQAFDPLGISDWNSLFWIAHPG----GPAILDAVEAKLNLDKKKLEATRHVLSEYGNMSSACVLFILDE 935 (979)
T ss_dssp HHHHHHHHHHHHHHHGGGTCCCGGGSEEEECCS----CHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcCCCCcccceEEECCC----ChHHHHHHHHHcCCChHHHHHHHHHHHHcCCcchhhHHHHHHH
Confidence 344556788999999999999999999876432 23455778899999854322 24577899999999988
Q ss_pred HHHHHHcC
Q 010144 233 VQQLFRTY 240 (517)
Q Consensus 233 A~~lL~ag 240 (517)
+..-++.|
T Consensus 936 ~~~~~~~G 943 (979)
T 3tsy_A 936 MRKKSLKG 943 (979)
T ss_dssp HHHHHHHT
T ss_pred HHhhhccc
Confidence 87755544
|
| >1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A | Back alignment and structure |
|---|
Probab=82.65 E-value=1.8 Score=44.60 Aligned_cols=92 Identities=16% Similarity=0.297 Sum_probs=56.0
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecC--------CcchHHHHHHHHHHHH
Q 010144 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSG--------MGCSASVVAVDLVQQL 236 (517)
Q Consensus 165 a~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~--------mgCsggl~AL~lA~~l 236 (517)
...|++++|+++|++|+|||++-++- ......-.+.+.||+.+ ..+++++ .|++|....+.++.+|
T Consensus 297 ~~~a~~~al~~Agl~~~dId~ie~~d----~f~~~~l~~~~~lg~~~--~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L 370 (397)
T 1wl4_A 297 PIPAIKQAVTKAGWSLEDVDIFEINE----AFAAVSAAIVKELGLNP--EKVNIEGGAIALGHPLGASGCRILVTLLHTL 370 (397)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEECC----SBHHHHHHHHHHHTCCG--GGBSTTCCHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEec----ccHHHHHHHHHHcCCCC--cCcCCCcCccccCCChhhhHHHHHHHHHHHH
Confidence 46899999999999999999987541 12233445778888753 2233432 2455555555555555
Q ss_pred HHcCCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEee
Q 010144 237 FRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTN 283 (517)
Q Consensus 237 L~ag~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~ 283 (517)
-.. ..+++|+. .|..|-.+.|+||++
T Consensus 371 ~~~-~~~~gl~~--------------------~~~ggG~~~a~~~e~ 396 (397)
T 1wl4_A 371 ERM-GRSRGVAA--------------------LCIGGGMGIAMCVQR 396 (397)
T ss_dssp HHH-TCCEEEEE--------------------EEETTTEEEEEEEEE
T ss_pred hhc-CCCEEEEE--------------------EecccchheEEEEEe
Confidence 433 33444443 344455566888775
|
| >2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=81.92 E-value=1.2 Score=45.34 Aligned_cols=80 Identities=15% Similarity=0.247 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHhCC------CCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeE------EEecCCcchHHHHH
Q 010144 162 DEIIFDTLDKLFARTD------ISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKA------FNLSGMGCSASVVA 229 (517)
Q Consensus 162 ~~la~~Aa~~aL~~ag------i~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~------~dl~~mgCsggl~A 229 (517)
.+-..++++++|+++| ++++|||.+ ...+ ....-..+.++||++++-.. -..+++++++...+
T Consensus 266 ~~~~~~~i~~~L~~ag~~~~~~l~~~did~~-~H~~----~~~i~d~~~~~lgl~~~k~~~s~~~~~~~Gnt~sasi~~~ 340 (374)
T 2h84_A 266 GSGIEAFVDTLLDKAKLQTSTAISAKDCEFL-IHTG----GKSILMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIFV 340 (374)
T ss_dssp HHHHHHHHHHHHHHHTTTSCSCCCSSSSEEE-ECCC----CHHHHHHHHHHTTCCGGGGHHHHHHHHHHCBCTTHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCccccCCChhhcCEe-ECCC----CHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHH
Confidence 4456778899999999 999999998 5321 12334568889999754222 24566677777777
Q ss_pred HHHHHHHHHcC-CCCEEEEEE
Q 010144 230 VDLVQQLFRTY-KNKLAIVVS 249 (517)
Q Consensus 230 L~lA~~lL~ag-~~~~aLVVs 249 (517)
|+.+. +.+ +.+++|+++
T Consensus 341 L~~~~---~~~~~Gd~vll~~ 358 (374)
T 2h84_A 341 MDHAR---KSKSLPTYSISLA 358 (374)
T ss_dssp HHHHH---TCSCCCSEEEEEE
T ss_pred HHHHH---hhcCCCCeEEEEE
Confidence 76554 233 345666654
|
| >1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* | Back alignment and structure |
|---|
Probab=80.24 E-value=3 Score=42.81 Aligned_cols=42 Identities=12% Similarity=0.220 Sum_probs=30.6
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCC
Q 010144 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLR 210 (517)
Q Consensus 165 a~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~ 210 (517)
...|++++|+++|++|+|||++-.+-+ .......+.+.||+.
T Consensus 287 ~~~a~~~al~~Agl~~~dId~ve~~d~----f~~~~~~~~~~lg~~ 328 (390)
T 1wdk_C 287 PVPATQKALKRAGLNMADIDFIELNEA----FAAQALPVLKDLKVL 328 (390)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEECCS----BHHHHHHHHHHTTCG
T ss_pred HHHHHHHHHHHcCCChhhCcEEEeccC----CHHHHHHHHHHcCCC
Confidence 368999999999999999999865411 112345566788875
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 517 | ||||
| d1teda_ | 372 | c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacte | 2e-38 | |
| d1ee0a2 | 160 | c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcon | 1e-16 | |
| d1u0ma1 | 200 | c.95.1.2 (A:2-201) Putative polyketide synthase SC | 2e-16 | |
| d1u0ma2 | 148 | c.95.1.2 (A:202-349) Putative polyketide synthase | 5e-15 | |
| d1bi5a2 | 154 | c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (M | 6e-15 | |
| d1u0ua2 | 156 | c.95.1.2 (A:238-393) Dihydropinosylvin synthase {S | 3e-14 | |
| d1mzja2 | 153 | c.95.1.2 (A:184-336) Priming beta-ketosynthase fro | 5e-11 | |
| d1u6ea2 | 148 | c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (Fa | 7e-10 | |
| d1ub7a2 | 149 | c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (Fa | 1e-09 | |
| d1hnja2 | 143 | c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (Fa | 3e-08 |
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 372 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 142 bits (358), Expect = 2e-38
Identities = 54/334 (16%), Positives = 116/334 (34%), Gaps = 42/334 (12%)
Query: 148 REESPSLAEAFSEMDEIIFD----TLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRI 203
R E ++ + E + A +EI +LV+ S AP + I
Sbjct: 75 RREPATIRDRMHLFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAI 134
Query: 204 INRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGREK 263
+ L I ++ MGC+A++ A+ R + A+VV E N +
Sbjct: 135 VKELGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELCSVNAVFADDI 194
Query: 264 SMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHP 323
+ ++ + LF G ++++ ++ + K+ R+ F + E + +
Sbjct: 195 NDVVIHSLFGDGCAALVIGASQVQEKLEPGKVVV--RSSFSQLLDNTEDGIVLGVNHNGI 252
Query: 324 GFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLG 383
L++ L + + P+ + + +
Sbjct: 253 TCELSENLPG-----------YIFSGVAPVVTEMLWDNGLQISD---------------- 285
Query: 384 AGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGY 443
I+ + +HPGG +I+ + + L + + L RFGN + L +VL
Sbjct: 286 --------IDLWAIHPGGPKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLET 337
Query: 444 MEAKKRLKKG-DRILMISLGAGFKCNNCVWEVMK 476
M + K + + G G ++++++
Sbjct: 338 MVQQAESAKAISTGVAFAFGPGVTVEGMLFDIIR 371
|
| >d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} Length = 160 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Pyrone synthase (PyS, chalcone synthase 2) species: Gerbera hybrid cultivar [TaxId: 18101]
Score = 75.0 bits (184), Expect = 1e-16
Identities = 19/90 (21%), Positives = 38/90 (42%), Gaps = 7/90 (7%)
Query: 394 HFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKG 453
+ +HPGGRA++D + L L E L +R L +GN + + +++ + + +
Sbjct: 69 FWMVHPGGRAILDQVERKLNLKEDKLRASRHVLSEYGNLISACVLFIIDEVRKRSMAEGK 128
Query: 454 -------DRILMISLGAGFKCNNCVWEVMK 476
D ++ G G V ++
Sbjct: 129 STTGEGLDCGVLFGFGPGMTVETVVLRSVR 158
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Length = 200 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Score = 75.1 bits (184), Expect = 2e-16
Identities = 28/169 (16%), Positives = 62/169 (36%), Gaps = 7/169 (4%)
Query: 120 EEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAE----AFSEMDEIIFDTLDKLFAR 175
+ L+ + ++G+ E E P + E + + +
Sbjct: 32 PQLPLALRLIENTGVRTRHIVQPI--EDTLEHPGFEDRNKVYEREAKSRVPAVIQRALDD 89
Query: 176 TDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQ 235
++ ++IDV++ PSLT+ +IN + + ++ +GC+A A++
Sbjct: 90 AELLATDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHD 149
Query: 236 LFRTYKNKLAIVVSTESMGPNWYCG-REKSMMLSNILFRSGGCSMLLTN 283
Y A++V+ E + +L N LF G + ++
Sbjct: 150 FCTAYPEANALIVACEFCSLCYQPTDLGVGSLLCNGLFGDGIAAAVVRG 198
|
| >d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Length = 148 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Score = 70.0 bits (171), Expect = 5e-15
Identities = 19/92 (20%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Query: 384 AGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGY 443
G + ++ + +H GG ++D LE+D + +R L +GN ++ + L
Sbjct: 56 HGWDASD-LDFYIVHAGGPRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDALRR 114
Query: 444 MEAKKRLKKGDRILMISLGAGFKCNNCV--WE 473
+ + +++G R L+ G G + W+
Sbjct: 115 LFDEGGVEEGARGLLAGFGPGITAEMSLGCWQ 146
|
| >d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Length = 154 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Score = 70.0 bits (171), Expect = 6e-15
Identities = 19/88 (21%), Positives = 33/88 (37%), Gaps = 7/88 (7%)
Query: 392 IEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAK---- 447
+ HPGG A++D + L L + R L +GN S+ + ++L M K
Sbjct: 62 SIFWIAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQN 121
Query: 448 ---KRLKKGDRILMISLGAGFKCNNCVW 472
+ + ++ G G V
Sbjct: 122 GLKTTGEGLEWGVLFGFGPGLTIETVVL 149
|
| >d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} Length = 156 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Dihydropinosylvin synthase species: Scots pine (Pinus sylvestris) [TaxId: 3349]
Score = 68.1 bits (166), Expect = 3e-14
Identities = 25/129 (19%), Positives = 49/129 (37%), Gaps = 9/129 (6%)
Query: 353 LREQ-FRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKG 411
+RE + ++ + I + + EA ++ + +HPGGRA++D
Sbjct: 24 VREVGLTFQLKGAVPDLISANIENCMVEAFSQFKIS-DWNKLFWVVHPGGRAILDRVEAK 82
Query: 412 LELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAK-------KRLKKGDRILMISLGAG 464
L LD L P R + +GN S+ + ++L + + ++ G G
Sbjct: 83 LNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFGFGPG 142
Query: 465 FKCNNCVWE 473
V +
Sbjct: 143 LTIETVVLK 151
|
| >d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Length = 153 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Score = 58.6 bits (141), Expect = 5e-11
Identities = 18/74 (24%), Positives = 27/74 (36%), Gaps = 2/74 (2%)
Query: 392 IEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLK 451
+ F H +ID L + E+ + GNTS+ + L + +
Sbjct: 68 LVAFVPHQANLRIIDVLVDRLGVPEHVVVS--RDAEDTGNTSSASVALALDRLVRSGAVP 125
Query: 452 KGDRILMISLGAGF 465
G LMI GAG
Sbjct: 126 GGGPALMIGFGAGL 139
|
| >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 148 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 55.5 bits (133), Expect = 7e-10
Identities = 20/83 (24%), Positives = 31/83 (37%), Gaps = 2/83 (2%)
Query: 392 IEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLK 451
I+ F H + + K L+L + + GNTSA + + + K
Sbjct: 68 IDVFVPHQANSRINELLVKNLQLRPDAVVA--NDIEHTGNTSAASIPLAMAELLTTGAAK 125
Query: 452 KGDRILMISLGAGFKCNNCVWEV 474
GD L+I GAG V +
Sbjct: 126 PGDLALLIGYGAGLSYAAQVVRM 148
|
| >d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Length = 149 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Score = 54.4 bits (130), Expect = 1e-09
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Query: 392 IEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLK 451
I F H +ID + L L E + + R+GNTS + L R++
Sbjct: 67 IRLFVPHQANLRIIDAARERLGLPW---ERVAVNVDRYGNTSTASIPLALKEAVDAGRIR 123
Query: 452 KGDRILMISLGAGFKCNNCVWE 473
+GD +L++S GAG V
Sbjct: 124 EGDHVLLVSFGAGLTWAAAVLT 145
|
| >d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Length = 143 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Score = 50.6 bits (120), Expect = 3e-08
Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 3/82 (3%)
Query: 392 IEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLK 451
++ H +I T K L + + + L R GNTSA + L R+K
Sbjct: 64 LDWLVPHQANLRIISATAKKLGMSM---DNVVVTLDRHGNTSAASVPCALDEAVRDGRIK 120
Query: 452 KGDRILMISLGAGFKCNNCVWE 473
G +L+ + G GF + +
Sbjct: 121 PGQLVLLEAFGGGFTWGSALVR 142
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 517 | |||
| d1teda_ | 372 | Polyketide synthase PKS18 {Mycobacterium tuberculo | 100.0 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 100.0 | |
| d1u6ea1 | 184 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 99.98 | |
| d1hnja1 | 174 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 99.97 | |
| d1bi5a1 | 235 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 99.97 | |
| d1mzja1 | 181 | Priming beta-ketosynthase from the r1128 polyketid | 99.97 | |
| d1ub7a1 | 172 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 99.97 | |
| d1xpma1 | 166 | 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap | 99.95 | |
| d1hnja2 | 143 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 99.94 | |
| d1ub7a2 | 149 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 99.93 | |
| d1mzja2 | 153 | Priming beta-ketosynthase from the r1128 polyketid | 99.92 | |
| d1u6ea2 | 148 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 99.92 | |
| d1ee0a2 | 160 | Pyrone synthase (PyS, chalcone synthase 2) {Gerber | 99.87 | |
| d1u0ma2 | 148 | Putative polyketide synthase SCO1206 {Streptomyces | 99.87 | |
| d1u0ua2 | 156 | Dihydropinosylvin synthase {Scots pine (Pinus sylv | 99.86 | |
| d1bi5a2 | 154 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 99.85 | |
| d1j3na1 | 249 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 98.99 | |
| d2gfva1 | 250 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 98.96 | |
| d1xpma2 | 221 | 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap | 98.94 | |
| d1ox0a1 | 256 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 98.85 | |
| d1ulqa1 | 273 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 98.8 | |
| d1e5ma1 | 250 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 98.78 | |
| d1m3ka1 | 268 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 98.76 | |
| d1wdkc1 | 262 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 98.59 | |
| d1tqya1 | 216 | Actinorhodin polyketide putative beta-ketoacyl syn | 98.5 | |
| d2ix4a1 | 270 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 98.44 | |
| d2vbaa1 | 253 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 98.42 | |
| d1afwa1 | 269 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 98.31 | |
| d1tqyb1 | 208 | Actinorhodin polyketide putative beta-ketoacyl syn | 98.17 | |
| d1u6ea2 | 148 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 96.77 | |
| d1ub7a2 | 149 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 96.17 | |
| d1tqyb2 | 194 | Actinorhodin polyketide putative beta-ketoacyl syn | 95.99 | |
| d1mzja2 | 153 | Priming beta-ketosynthase from the r1128 polyketid | 95.81 | |
| d1tqya2 | 205 | Actinorhodin polyketide putative beta-ketoacyl syn | 95.66 | |
| d1hnja2 | 143 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 95.5 | |
| d1m3ka2 | 124 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 93.0 | |
| d1u0ma2 | 148 | Putative polyketide synthase SCO1206 {Streptomyces | 91.79 | |
| d1ulqa2 | 125 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 90.21 | |
| d1m3ka2 | 124 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 89.2 | |
| d1teda_ | 372 | Polyketide synthase PKS18 {Mycobacterium tuberculo | 88.42 | |
| d1afwa2 | 124 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 87.39 | |
| d1afwa2 | 124 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 86.42 | |
| d1wdkc2 | 128 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 83.34 | |
| d1e5ma2 | 161 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 82.81 | |
| d1ulqa2 | 125 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 81.49 | |
| d1ox0a2 | 158 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 80.12 |
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=1.2e-53 Score=443.57 Aligned_cols=350 Identities=16% Similarity=0.171 Sum_probs=273.0
Q ss_pred ceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCC----CCCCc----cHH
Q 010144 84 CCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEG----REESP----SLA 155 (517)
Q Consensus 84 ~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~----~~~~~----~m~ 155 (517)
..+|.|+|+|+|++ +|+|+|+.+.+..... +++..+.+.+|++++||++||++.+..... .+..+ .+.
T Consensus 11 ~a~I~g~g~~~P~~---~v~n~e~~~~~~~~~~-~~~~~~~~~ri~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~r~~ 86 (372)
T d1teda_ 11 VAVIEGLATGTPRR---VVNQSDAADRVAELFL-DPGQRERIPRVYQKSRITTRRMAVDPLDAKFDVFRREPATIRDRMH 86 (372)
T ss_dssp EEEEEEEEEECCSC---EEEHHHHHHHHHTC-----CCTTHHHHHHHTSCCSEEECSSCTTSTTHHHHTTCSSCHHHHHH
T ss_pred eEEEEEEEEeCCCe---EEcHHHHHHHHHhhcC-ChHHHHHHHHHHHccCCcccceeccccccchhhhhhcCCCHHHHHH
Confidence 37899999999999 9999999999865432 223345567899999999999875532110 00112 244
Q ss_pred HhHhhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHH
Q 010144 156 EAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQ 235 (517)
Q Consensus 156 ~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~ 235 (517)
.+.+++.+|+++|+++||+++|++|+|||+||+++++++..|+++++|+++||+++++..+++.++||+|++.||++|.+
T Consensus 87 ~~~e~~~~la~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~ 166 (372)
T d1teda_ 87 LFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATN 166 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCchHHHHHHhhhccCCceeEeeccccCccHHHHHHHHHHH
Confidence 56789999999999999999999999999999987778899999999999999998899999987899999999999999
Q ss_pred HHHcCCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccccccchhhccceeeee--eccCcccccce
Q 010144 236 LFRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTH--FGSNDEAYECC 313 (517)
Q Consensus 236 lL~ag~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~~~~~~~~l~~i~~t~--~~td~~~~~~~ 313 (517)
++++++.++||||++|.++.++....+....++.++|||||+|+||++++.......... .+.... ...+. .+.+
T Consensus 167 ~l~sg~~~~~LVV~~E~~s~~~~~~d~~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~ 243 (372)
T d1teda_ 167 YVRAHPAMKALVVCIELCSVNAVFADDINDVVIHSLFGDGCAALVIGASQVQEKLEPGKV-VVRSSFSQLLDNT--EDGI 243 (372)
T ss_dssp HHHHSTTCEEEEEEEEECGGGCCCCSSHHHHHHHHHBCEEEEEEEEEEECTTSCCCTTCE-EEEEEEEEECTTC--TTSE
T ss_pred HHhcCCCccceeeeehhhcccccCCCcchhhhhhhhhcccceeEEeccCCcccccCCcee-EEecccccccCCC--cccc
Confidence 999999999999999999875544444444456789999999999998765421111110 011111 11111 0111
Q ss_pred eeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccc
Q 010144 314 MQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIE 393 (517)
Q Consensus 314 ~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did 393 (517)
.+..+ ..+...+.+.+++.+..+.+++.+.++| +++|+.+ +|||
T Consensus 244 ~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~i~~~L-------~~~gl~~---~did 287 (372)
T d1teda_ 244 VLGVN--------------------------HNGITCELSENLPGYIFSGVAPVVTEML-------WDNGLQI---SDID 287 (372)
T ss_dssp EEEEE--------------------------TTEEEEEECTTHHHHHHHHHHHHHHHHH-------HHTTCCG---GGCS
T ss_pred ccCCC--------------------------CCcceeechHHHHHHHHHHHHHHHHHHH-------HhcCCCH---HHhh
Confidence 11000 0011122335566677777888888888 8999995 9999
Q ss_pred eeecCCCChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCC-CEEEEEEechhHHhheeee
Q 010144 394 HFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKG-DRILMISLGAGFKCNNCVW 472 (517)
Q Consensus 394 ~~~~Hq~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~G-d~VlliafG~G~t~~a~vl 472 (517)
+|++||+|.++++.+++.||++++++..++.++++||||+|||+|+.|++++++|++.+| |++++++||+|++|++++|
T Consensus 288 ~~i~Hq~~~~i~~~i~~~Lgl~~ek~~~s~~~l~~~GN~~sasip~~L~~~l~~g~~~~g~d~vll~~fG~G~s~~~~ll 367 (372)
T d1teda_ 288 LWAIHPGGPKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQQAESAKAISTGVAFAFGPGVTVEGMLF 367 (372)
T ss_dssp CEEECCSCHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHHHHHHHSCSSSSSSEEEEEEEEETTTEEEEEEE
T ss_pred hhhccCccHHHHHHHHHHcCCCHHHhhhhHHHHhccCCcHHHHHHHHHHHHHHhCCCCCCCCEEEEEEEcHHHhHHHHhh
Confidence 999999999999999999999999998778889999999999999999999999988776 8999999999999999999
Q ss_pred EEec
Q 010144 473 EVMK 476 (517)
Q Consensus 473 r~~~ 476 (517)
++++
T Consensus 368 ~~~~ 371 (372)
T d1teda_ 368 DIIR 371 (372)
T ss_dssp EECC
T ss_pred eeec
Confidence 9976
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=2.9e-34 Score=273.36 Aligned_cols=194 Identities=14% Similarity=0.190 Sum_probs=164.5
Q ss_pred EEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCC-CCC-CccHHHhHhhHHH
Q 010144 86 YMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEG-REE-SPSLAEAFSEMDE 163 (517)
Q Consensus 86 ~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~-~~~-~~~m~~~~~ea~~ 163 (517)
+|..+++|+|++ +++|+|+++.++..+. +++..+++++|++++||++||++.+..+.. .+. ...+..+.+++.+
T Consensus 2 ~i~~~a~~~P~~---~v~n~e~~e~~~~~~~-~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~~~~~~~~~~~~~~~a~~ 77 (200)
T d1u0ma1 2 TLCRPSVSVPEH---VITMEETLELARRRHT-DHPQLPLALRLIENTGVRTRHIVQPIEDTLEHPGFEDRNKVYEREAKS 77 (200)
T ss_dssp EECCCEEECCSE---EEEHHHHHHHHHHHHT-TCTTHHHHHHHHHHTCCCEEEESSCHHHHTSCCCHHHHHHHHHHHHHH
T ss_pred eeccceEECCCe---eEcHHHHHHHHHHhCC-CchhHHHHHHHHHhCCCCeeeEECChhhhccCCCHHHHHHHHHHHHHH
Confidence 788999999999 9999999998876543 334567788999999999999976542211 111 1235567789999
Q ss_pred HHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCC
Q 010144 164 IIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNK 243 (517)
Q Consensus 164 la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~ 243 (517)
|+.+|+++||+++|++|+|||+||++++.++..|+.+++|+++||+++++..+++.++||+|++.||++|.+++++++.+
T Consensus 78 la~~Aa~~aL~~ag~~~~dId~lI~~s~t~~~~P~~aa~v~~~lg~~~~~~~~~i~~~gC~g~~~al~~A~~~l~~~~~~ 157 (200)
T d1u0ma1 78 RVPAVIQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEA 157 (200)
T ss_dssp HHHHHHHHHHHHHTCCGGGCSEEEEECSSSCCSSCHHHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHHcCCChhhhheEEEeccCCCCcchhHHHHHHHHhcCCCeeEeccccchhhHHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999998777788999999999999999999999998789999999999999999999999
Q ss_pred EEEEEEecCCCCCCCCCCC--ccccccccccccceEEEEEeec
Q 010144 244 LAIVVSTESMGPNWYCGRE--KSMMLSNILFRSGGCSMLLTNN 284 (517)
Q Consensus 244 ~aLVVs~E~~s~~~~~~~d--r~~lv~~~lfGDGAAAvLLs~~ 284 (517)
+||||++|.+|..+ ++.| +++++++++|||||+|+||+++
T Consensus 158 ~vLvv~~e~~S~~~-~~~d~~~~~~~~~~lFgDGAaA~ll~~~ 199 (200)
T d1u0ma1 158 NALIVACEFCSLCY-QPTDLGVGSLLCNGLFGDGIAAAVVRGR 199 (200)
T ss_dssp EEEEEEEEEGGGGC-CTTCCSHHHHHHHHHBCEEEEEEEEETT
T ss_pred EEEEEEEecccccc-CCCCCChhhhhcccccccccEEEEEecC
Confidence 99999999999854 3334 3456678899999999999975
|
| >d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=2.5e-32 Score=254.33 Aligned_cols=169 Identities=18% Similarity=0.267 Sum_probs=148.7
Q ss_pred ceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhhHHH
Q 010144 84 CCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDE 163 (517)
Q Consensus 84 ~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~ea~~ 163 (517)
..+|+++|+|+|++ +++++++.+.++.. + +++.+++||++|++.+++ ++.. +
T Consensus 2 ~a~I~g~g~ylP~~---~v~n~el~~~~~~~----~------~~i~~~~Gi~~r~~~~~~-----~~~~----------~ 53 (174)
T d1hnja1 2 YTKIIGTGSYLPEQ---VRTNADLEKMVDTS----D------EWIVTRTGIRERHIAAPN-----ETVS----------T 53 (174)
T ss_dssp EEEEEEEEEECCSE---EEEHHHHHTTSSCC----H------HHHHHHHCCCEEEECCTT-----CCHH----------H
T ss_pred ccEEEEEEEECCCC---cccHHHHHHHhCCC----H------HHHHhccCcceeeecCCC-----ccch----------H
Confidence 46899999999999 99999998776542 3 378899999999997653 4333 4
Q ss_pred HHHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCC
Q 010144 164 IIFDTLDKLFARTDISPSEIDVLVVN-VSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKN 242 (517)
Q Consensus 164 la~~Aa~~aL~~agi~p~dID~LI~a-~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~ 242 (517)
|+.+|+++||+++|++|+|||+||++ +++++..|+.+++||++||++ ++.+||+++ +|+|++.||++|.+++++++.
T Consensus 54 la~~Aa~~al~~a~~~~~~Id~li~~s~~~~~~~P~~a~~v~~~Lgl~-~~~~~di~~-~C~g~~~al~~A~~~i~sg~~ 131 (174)
T d1hnja1 54 MGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIK-GCPAFDVAA-ACAGFTYALSVADQYVKSGAV 131 (174)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCC-SSCEEEECC-GGGHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHhhhhcccccccccEEEEecCCccccccchhhhhhhccCCC-chhhhhhhh-hhccHHHHHHHHHHHHhcCCc
Confidence 57999999999999999999999987 468899999999999999997 899999997 999999999999999999999
Q ss_pred CEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeeccc
Q 010144 243 KLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRA 286 (517)
Q Consensus 243 ~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~ 286 (517)
++||||++|..|. +.++.|+.. ..+|||||+|+||+++++
T Consensus 132 ~~~Lvv~~e~~S~-~~~~~d~~~---~~lfGDgA~A~vl~~~~~ 171 (174)
T d1hnja1 132 KYALVVGSDVLAR-TCDPTDRGT---IIIFGDGAGAAVLAASEE 171 (174)
T ss_dssp SEEEEEEEECHHH-HSCTTCHHH---HTTBCCEEEEEEEEEESS
T ss_pred ceeEEEeeehhhc-ccCCCCCCe---EEEeceeeEEEEEEeCCC
Confidence 9999999999987 456677764 679999999999998764
|
| >d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=99.97 E-value=1.1e-31 Score=261.60 Aligned_cols=209 Identities=13% Similarity=0.124 Sum_probs=167.9
Q ss_pred HhhhhcCCCceEEEEEEEEeCCCCCceecHHHHHHHHHhccc--CChHHHHHHHHHHHHhCCceeEeccCCCc-------
Q 010144 75 KWVLQKRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKK--LGLEEYRFLLKNMVSSGIGEETYGPRNVV------- 145 (517)
Q Consensus 75 ~~~~~~~~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~--~~~~~~~~~~ri~~~sGI~~r~~~~~~~~------- 145 (517)
|..|| .+.+++|+|+|+|+|++ +++|+++.+.+..... ...+..+..+++++++||++|++..+..+
T Consensus 8 ~~~~r-~~~pa~I~giGt~~P~~---~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~ 83 (235)
T d1bi5a1 8 RKAQR-AEGPATILAIGTANPAN---CVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTEEILKENPNV 83 (235)
T ss_dssp HHHHS-CCSCCEEEEEEEECCSC---EEESTTHHHHHHHHTTCTTCHHHHHHHHHHHHHSCCCEEECSCCHHHHHTCHHH
T ss_pred hhccC-CCCCcEEEEEEEECCCc---EEeHHHHHHHHHHhhccccchhhhhhhhhhhcccCCceeEEecChHhhccCccc
Confidence 44455 34558999999999999 9999999998765432 23445566789999999999998654211
Q ss_pred ---CCCCCCccHHHhHhhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecCCc
Q 010144 146 ---EGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMG 222 (517)
Q Consensus 146 ---~~~~~~~~m~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mg 222 (517)
..+.....+..+.+++.+|+.+|++++|+++|++++|||+||++|+.+...|+.++.+++++|+.+++..+++.++|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~~~~p~~~a~~~~~l~~~~~~~~~~~~~~~ 163 (235)
T d1bi5a1 84 CEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQG 163 (235)
T ss_dssp HSSSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEESCC
T ss_pred ccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHCcEEEEecccCCccCccHHHHHHHHhcCCCceEEeeecCc
Confidence 00111124566778999999999999999999999999999998765666899999999999998899999887789
Q ss_pred chHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCCCCCCC--CccccccccccccceEEEEEeecccc
Q 010144 223 CSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGR--EKSMMLSNILFRSGGCSMLLTNNRAL 287 (517)
Q Consensus 223 Csggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~~~~~~--dr~~lv~~~lfGDGAAAvLLs~~~~~ 287 (517)
|+|++.||++|.+++++++.++||||++|.+|..+...+ +.++++.+.+|||||+|+||++++..
T Consensus 164 C~g~~~al~~A~~~i~~~~~~~vLvV~~E~~S~~~~~~d~~~~~~~v~~~lFGDGA~A~vl~~~p~~ 230 (235)
T d1bi5a1 164 CFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVP 230 (235)
T ss_dssp TTHHHHHHHHHHHHHHTSTTCEEEEEEEECGGGTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSCCT
T ss_pred cchHHHHHHHHHHHHHcCCCCeEEEEEeeecceecCCCCCCchhhhcceeeeccceEEEEEecCCCC
Confidence 999999999999999999999999999999998543222 23445667899999999999987653
|
| >d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=99.97 E-value=1.1e-31 Score=251.58 Aligned_cols=171 Identities=18% Similarity=0.293 Sum_probs=149.1
Q ss_pred CCceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhhH
Q 010144 82 GQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEM 161 (517)
Q Consensus 82 ~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~ea 161 (517)
++..+|+++|+|+|++ +++++++.+.++.. ++ ++.+++||++|+++.++ ++..+|
T Consensus 7 ~~~arI~g~g~ylP~~---~v~n~e~~~~~~~~----~~------~i~~~tGi~~R~~~~~~-----e~~~~m------- 61 (181)
T d1mzja1 7 RRFSRVLGVGSYRPRR---EVSNKEVCTWIDST----EE------WIETRTGIRSRRIAEPD-----ETIQVM------- 61 (181)
T ss_dssp CCEEEEEEEEEECCSC---EEEHHHHTTTSSCC----HH------HHHHHHCCSEEECCCTT-----CCHHHH-------
T ss_pred CCccEEEEEEEECCCc---eecHHHHHHHcCCC----HH------HHHhccCcceehhhccC-----CcHHHH-------
Confidence 4558999999999999 99999998766542 32 68889999999987653 443444
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcC
Q 010144 162 DEIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTY 240 (517)
Q Consensus 162 ~~la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag 240 (517)
+++|+++||+++|++|+|||+||+++ ++++..|+.+..||++||.+ ++.+||+++ ||+|++.||++|.++++++
T Consensus 62 ---a~~Aa~~aL~~a~~~~~dId~li~~s~~~~~~~p~~a~~v~~~l~~~-~~~~~Dv~~-~C~g~~~aL~~A~~~i~~~ 136 (181)
T d1mzja1 62 ---GVAASRRALEHAGVDPAEIDLVVVSTMTNFVHTPPLSVAIAHELGAD-NAGGFDLSA-ACAGFCHALSIAADAVESG 136 (181)
T ss_dssp ---HHHHHHHHHHHHTCCGGGCCEEEEECSCCCCCSSCHHHHHHHHHTCT-TCEEEEEEC-GGGHHHHHHHHHHHHHHHS
T ss_pred ---hHHHHHhhhhhccCChhHCeEEEEeccCCccccccHHHHHHHhhcCC-CccceeHHh-hhccHHHHHHHHhCHhhcC
Confidence 79999999999999999999999874 68899999999999999986 899999996 9999999999999999999
Q ss_pred CCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeeccc
Q 010144 241 KNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRA 286 (517)
Q Consensus 241 ~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~ 286 (517)
+.++||||++|.+|. ..++.|+.. ..+|||||+|+||++++.
T Consensus 137 ~~~~~LvV~~e~~s~-~~~~~d~~~---~~lfGDGAaA~ll~~~~~ 178 (181)
T d1mzja1 137 GSRHVLVVATERMTD-VIDLADRSL---SFLFGDGAGAAVVGPSDV 178 (181)
T ss_dssp SCSCEEEEEEEEGGG-GSCSSCTTT---TTTBCEEEEEEEEEEESS
T ss_pred CCceeEEeeeccccc-cCCCCCcce---EEEeeeeeEEEEEEeCCC
Confidence 999999999999987 456667664 689999999999998654
|
| >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=99.97 E-value=1.9e-31 Score=247.98 Aligned_cols=167 Identities=17% Similarity=0.265 Sum_probs=146.1
Q ss_pred EEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhhHHHHH
Q 010144 86 YMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDEII 165 (517)
Q Consensus 86 ~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~ea~~la 165 (517)
+|.++|+|+|++ +++++++.+..+.. . ++|.+++||++|+++.++ ++.+ +|+
T Consensus 2 gI~~ig~ylP~~---~v~n~~~~~~~~~~----~------~~i~~~~Gi~~R~~~~~~-----e~~~----------~ma 53 (172)
T d1ub7a1 2 GILALGAYVPER---VMTNADFEAYLDTS----D------EWIVTRTGIKERRVAAED-----EYTS----------DLA 53 (172)
T ss_dssp EEEEEEEECCSE---EEEHHHHHTTSSCC----H------HHHHHHTCCCEEEECCTT-----CCHH----------HHH
T ss_pred ceeEEEEECCCc---eEcHHHHHHHhCCC----H------HHHHhccCceeeeecccc-----cccc----------HHH
Confidence 799999999999 99999998765432 2 268899999999997653 4433 447
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCE
Q 010144 166 FDTLDKLFARTDISPSEIDVLVVN-VSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKL 244 (517)
Q Consensus 166 ~~Aa~~aL~~agi~p~dID~LI~a-~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~ 244 (517)
.+|+++||+++|++|+|||+||++ +++++..|+.+.+|+++||. ++.+|||++ +|+|++.||++|.++++++..++
T Consensus 54 ~~Aa~~aL~~agi~~~dIdlli~~s~t~~~~~p~~a~~v~~~Lg~--~~~~~di~~-~C~g~~~al~~a~~~~~~~~~~~ 130 (172)
T d1ub7a1 54 FKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGL--KAFAYDLLA-GCPGWIYALAQAHALVEAGLAQK 130 (172)
T ss_dssp HHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTTC--CCEEEEEEC-STTHHHHHHHHHHHHHHTTSCSE
T ss_pred HHHHHHHHhhcCcccccceEEEEecccccccccchHHHHHHHhcc--Cccceeehh-ccccHHHHHHHHhhhhhcCCcce
Confidence 999999999999999999999987 46889999999999999995 689999997 99999999999999999999999
Q ss_pred EEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecccc
Q 010144 245 AIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRAL 287 (517)
Q Consensus 245 aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~~~ 287 (517)
||||++|.+|. ..+++|+.+ ..+|||||+|+||++.+++
T Consensus 131 ~Lvv~~e~~S~-~~~~~d~~~---~~lfGDgAaA~ll~~~~~~ 169 (172)
T d1ub7a1 131 VLAVGAEALSK-IIDWNDRAT---AVLFGDGGGAAVVGKVREG 169 (172)
T ss_dssp EEEEEEECGGG-TSCTTCHHH---HTTBCCEEEEEEEECCCTT
T ss_pred eEEeccccccc-ccCCCCcCe---EEEecceeEEEEEEEcCCC
Confidence 99999999998 456677764 6799999999999988764
|
| >d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS species: Staphylococcus aureus [TaxId: 1280]
Probab=99.95 E-value=2e-28 Score=225.98 Aligned_cols=164 Identities=17% Similarity=0.231 Sum_probs=140.7
Q ss_pred ceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHHhHhhHHH
Q 010144 84 CCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDE 163 (517)
Q Consensus 84 ~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~~~~ea~~ 163 (517)
.|+|.++++|+|++ +++++++.+..+. +++ |+.+++|+++|++..++ |++.+|
T Consensus 1 ~VgI~~~~~ylP~~---~v~~~e~~~~~g~----~~~------~i~~~~Gi~~r~~~~~~-----E~~~~m--------- 53 (166)
T d1xpma1 1 AIGIDKINFYVPKY---YVDMAKLAEARQV----DPN------KFLIGIGQTEMAVSPVN-----QDIVSM--------- 53 (166)
T ss_dssp CEEEEEEEEECCSE---EEEHHHHHHHTTS----CHH------HHHTTTCCSEEEECCTT-----CCHHHH---------
T ss_pred CeeEeEEEEECCCe---EEcHHHHHHHhCC----CHH------HHHHhcCcEEEEeCCCc-----cCHHHH---------
Confidence 48999999999999 9999999987654 233 68899999999997654 544445
Q ss_pred HHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCC
Q 010144 164 IIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKN 242 (517)
Q Consensus 164 la~~Aa~~aL~~agi~p~dID~LI~a~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~ 242 (517)
+.+|++++|++. ++++||+||+++ ++++..|+.+.+++++||+++++.+||+++ ||+|++.||++|.+++++++.
T Consensus 54 -a~~Aa~~al~~~--~~~~id~li~~t~~~~~~~p~~a~~v~~~lg~~~~~~~~dv~~-~C~g~~~al~~A~~~i~~~~~ 129 (166)
T d1xpma1 54 -GANAAKDIITDE--DKKKIGMVIVATESAVDAAKAAAVQIHNLLGIQPFARCFEMKE-ACYAATPAIQLAKDYLATRPN 129 (166)
T ss_dssp -HHHHHHTTCCHH--HHHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSCEEEEEES-TTTTHHHHHHHHHHHHTTCTT
T ss_pred -HHHHHHhhhccc--cCCCCCeEEEeccccccccchhHHHHHHhhccccceEEeeecc-cHHHHHHHHHHHhhHHhcCCC
Confidence 799999999876 478999999874 688899999999999999988999999997 999999999999999999999
Q ss_pred CEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeecc
Q 010144 243 KLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNR 285 (517)
Q Consensus 243 ~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~~ 285 (517)
+++|||++|..+.. .+..+ ..+|||||+|+||+++|
T Consensus 130 ~~alvV~sd~~~~~-~~~~~------~~~fGDGA~A~ll~~~P 165 (166)
T d1xpma1 130 EKVLVIATDTARYG-LNSGG------EPTQGAGAVAMVIAHNP 165 (166)
T ss_dssp CEEEEEEEEEECCC-TTCSS------GGGCEEEEEEEEEEESC
T ss_pred CeEEEEEEceEecc-CCCCC------CccCCCeeEEEEEecCC
Confidence 99999999987763 22222 25799999999999876
|
| >d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=99.94 E-value=6.2e-27 Score=210.98 Aligned_cols=143 Identities=19% Similarity=0.246 Sum_probs=127.0
Q ss_pred eeeeeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCch
Q 010144 299 VRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKP 378 (517)
Q Consensus 299 ~~t~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~ 378 (517)
++||+.+||+.++.+..+.++...+ .....+.|+|.++|+++++.+++.++++|
T Consensus 1 lst~l~sdG~~~~~l~~p~g~~~~p--------------------~~~~~~~m~G~~vf~~av~~~~~~i~~~L------ 54 (143)
T d1hnja2 1 ISTHLHADGSYGELLTLPNADRVNP--------------------ENSIHLTMAGNEVFKVAVTELAHIVDETL------ 54 (143)
T ss_dssp EEEEEEECGGGGGGEECCCCCSSCT--------------------TSCCSCEECHHHHHHHHHHHHHHHHHHHH------
T ss_pred CCccEEccCCCCCEEEECCCCCCCC--------------------CCCceEEEEChHHhhhhhhhhhHHHHHHH------
Confidence 3578899999998888775432211 11124578899999999999999999998
Q ss_pred hhhhCCCCCcccccceeecCCCChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEE
Q 010144 379 EAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILM 458 (517)
Q Consensus 379 ~~~~g~~~d~~~did~~~~Hq~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~Vll 458 (517)
+++|+++ +|||+|++||+|+++++.+++.||++++++ ..++++||||+|||+|++|++++++|++++||+|++
T Consensus 55 -~~~g~~~---~dId~~i~Hq~~~~~~~~~~~~l~l~~~k~---~~~~~~~GN~~sasip~~L~~~~~~~~~~~Gd~vll 127 (143)
T d1hnja2 55 -AANNLDR---SQLDWLVPHQANLRIISATAKKLGMSMDNV---VVTLDRHGNTSAASVPCALDEAVRDGRIKPGQLVLL 127 (143)
T ss_dssp -HHTTCCG---GGCCEEEECCSCHHHHHHHHHHTTCCGGGB---CCCHHHHCBCGGGHHHHHHHHHHHTTCSCTTCEEEE
T ss_pred -HHhhhcc---cccceEEeccCchHHHHHHHHhCccchhhh---hhhhhhhcccccchHHHHHHHHHHhCCCCCCCEEEE
Confidence 8999995 999999999999999999999999999999 688999999999999999999999999999999999
Q ss_pred EEechhHHhheeeeEE
Q 010144 459 ISLGAGFKCNNCVWEV 474 (517)
Q Consensus 459 iafG~G~t~~a~vlr~ 474 (517)
++||+|++|+++++||
T Consensus 128 ~g~G~G~s~g~~llrw 143 (143)
T d1hnja2 128 EAFGGGFTWGSALVRF 143 (143)
T ss_dssp EEEETTTEEEEEEEEC
T ss_pred EEEehhhhhEEEEEEC
Confidence 9999999999999997
|
| >d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=99.93 E-value=7e-26 Score=205.35 Aligned_cols=145 Identities=19% Similarity=0.263 Sum_probs=127.0
Q ss_pred eeccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhh
Q 010144 302 HFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAV 381 (517)
Q Consensus 302 ~~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~ 381 (517)
.+++||+.++.++.+.++...+ ... .....+.|+|.++|+|+++.+++.+.++| ++
T Consensus 4 ~l~sDG~~~~~l~~~~gg~~~p---~~~--------------~~~~~~~M~G~~vf~~a~~~vp~~i~~~L-------~~ 59 (149)
T d1ub7a2 4 VLGADGTGAKELYHACVAPRLP---DGT--------------SMKNRLYMNGREVFKFAVRVMNTATLEAI-------EK 59 (149)
T ss_dssp EEEECGGGCTTEEEESSCSBCT---TSC--------------BCCSSCEECHHHHHHHHHHHHHHHHHHHH-------HH
T ss_pred EEeeeCCCCceEEECCCCCCCC---CCc--------------CcCCcEEEccHHHHHHHHHHHHHHHHHHH-------Hh
Confidence 4678998889888876543221 110 11234678999999999999999999998 89
Q ss_pred hCCCCCcccccceeecCCCChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEEEe
Q 010144 382 LGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISL 461 (517)
Q Consensus 382 ~g~~~d~~~did~~~~Hq~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~Vlliaf 461 (517)
+|+++ +|||+|++||+|+++++.++++|+++++++ ..++++||||+|||+|++|++++++|++++||+|++++|
T Consensus 60 ~g~~~---~dId~~i~Hqa~~~~~~~i~~~lgi~~~k~---~~~~~~~Gn~~sasip~~L~~~~~~~~~~~Gd~vll~g~ 133 (149)
T d1ub7a2 60 AGLTP---EDIRLFVPHQANLRIIDAARERLGLPWERV---AVNVDRYGNTSTASIPLALKEAVDAGRIREGDHVLLVSF 133 (149)
T ss_dssp HTCCG---GGCSEEEECCSCHHHHHHHHHTTTCCGGGB---CCCHHHHCBCGGGHHHHHHHHHHHHTSSCTTCEEEEEEE
T ss_pred hcccc---ccccEEEeeccchHHHHHHHhhccchhhHH---HHHHHHhcCCcchhHHHHHHHHHHcCCCCCCCEEEEEEE
Confidence 99996 899999999999999999999999999999 689999999999999999999999999999999999999
Q ss_pred chhHHhheeeeEEec
Q 010144 462 GAGFKCNNCVWEVMK 476 (517)
Q Consensus 462 G~G~t~~a~vlr~~~ 476 (517)
|+|++|+++++||..
T Consensus 134 G~G~s~ga~llrw~g 148 (149)
T d1ub7a2 134 GAGLTWAAAVLTWGG 148 (149)
T ss_dssp ETTTEEEEEEEECCC
T ss_pred chHhhhEEEEEEECC
Confidence 999999999999954
|
| >d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=99.92 E-value=1.4e-25 Score=204.24 Aligned_cols=146 Identities=16% Similarity=0.133 Sum_probs=123.8
Q ss_pred eccCcccccceeeccccCCCCCcccchhHHHHHHHHHhhhhhhcccccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhh
Q 010144 303 FGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVL 382 (517)
Q Consensus 303 ~~td~~~~~~~~~~~~~~g~~g~~ls~~~~~~~~~~~~~~i~~lgpl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~ 382 (517)
+++|+..++.+..+.++... | .........+.|+|.++|+|+++.+++.+.++| ++.
T Consensus 5 ~gsDG~~~~~l~i~~gg~~~---------~-------~~~~~~~~~~~m~G~~v~~~av~~vp~~i~~~L-------~~~ 61 (153)
T d1mzja2 5 RGIDGTGLGSLHMSSSWDQY---------V-------EDPSVGRPALVMDGKRVFRWAVADVVPAAREAL-------EVA 61 (153)
T ss_dssp EEECGGGGGGEEESCCHHHH---------T-------TCSSSCSCCEEECHHHHHHHHHHHHHHHHHHHH-------HTT
T ss_pred eeccCCCCCEEEECCCCCCC---------C-------CCccCCCceEEEcCHHHHHHHHHHHHHHHHHHH-------HHh
Confidence 57788888888876532110 0 000011224689999999999999999999998 899
Q ss_pred CCCCCcccccceeecCCCChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEEEEEEec
Q 010144 383 GAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLG 462 (517)
Q Consensus 383 g~~~d~~~did~~~~Hq~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~VlliafG 462 (517)
|+++ +|||+|++||+|+++++.+++.||++++++. ..++++||||+|||+|+.|+++++++++++||+|++++||
T Consensus 62 gl~~---~dId~~i~Hq~~~~~~~~v~~~lgi~~ek~~--~~~~~~~GNt~Sasip~~L~~~~~~~~~~~Gd~ill~~fG 136 (153)
T d1mzja2 62 GLTV---GDLVAFVPHQANLRIIDVLVDRLGVPEHVVV--SRDAEDTGNTSSASVALALDRLVRSGAVPGGGPALMIGFG 136 (153)
T ss_dssp TCCG---GGCSEEEECCSCHHHHHHHHHHHTCCTTSEE--CCTHHHHCBCTTHHHHHHHHHHHHHTSSCTTCEEEEEEEE
T ss_pred CCCc---ccCCEEEEcCCcHHHHHHHHHHhCCCchhcc--hhhhhhcCCcccchHHHHHHHHHHcCCCCCCCEEEEEEEc
Confidence 9995 9999999999999999999999999999973 2478999999999999999999999999999999999999
Q ss_pred hhHHhheeeeEEec
Q 010144 463 AGFKCNNCVWEVMK 476 (517)
Q Consensus 463 ~G~t~~a~vlr~~~ 476 (517)
+|++|++++++|..
T Consensus 137 ~G~s~~~~~l~~~~ 150 (153)
T d1mzja2 137 AGLSYAGQALLLPD 150 (153)
T ss_dssp TTTEEEEEEEECCC
T ss_pred hhhhhhEEEEEecC
Confidence 99999999999965
|
| >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.92 E-value=3.2e-25 Score=200.77 Aligned_cols=115 Identities=22% Similarity=0.201 Sum_probs=108.4
Q ss_pred cccCcHHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHHHHHHhhCCCCcccchhhhhccc
Q 010144 348 PKILPLREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALH 427 (517)
Q Consensus 348 pl~~~~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il~~i~~~Lgl~~e~~~~S~~~l~ 427 (517)
.+.|+|.++|+|+++.+++.+.++| +++|+++ +|||+|++||+|+++++.++++||+++|++. ..+++
T Consensus 34 ~~~m~G~~Vf~~a~~~v~~~i~~~L-------~~~gl~~---~dId~~i~Hqa~~~i~~~v~~~lgl~~ek~~--~~~~~ 101 (148)
T d1u6ea2 34 FVRLEGPAVFRWAAFKMGDVGRRAM-------DAAGVRP---DQIDVFVPHQANSRINELLVKNLQLRPDAVV--ANDIE 101 (148)
T ss_dssp CEEECHHHHHHHHHHHHHHHHHHHH-------HHHTCCG---GGCCEEEECCSCHHHHHHHHHHHTCCTTCEE--CCTHH
T ss_pred cEEeecHHHHHHHHHHHHHHHHHHH-------HHcCCCc---ccccEEEeccccHHHHHHHHHhcCCCchhhh--hhhHH
Confidence 3588999999999999999999998 8999996 9999999999999999999999999999983 24689
Q ss_pred CcccchhhHHHHHHHHHHHcCCCCCCCEEEEEEechhHHhheeeeEE
Q 010144 428 RFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEV 474 (517)
Q Consensus 428 ~~GNtsSASi~~~L~~~~~~g~i~~Gd~VlliafG~G~t~~a~vlr~ 474 (517)
+||||+|||+|++|++++++|++++||+|++++||+|++|+++++|+
T Consensus 102 ~~GNt~sasip~~L~~a~~~g~i~~Gd~vll~gfG~G~s~~a~llrv 148 (148)
T d1u6ea2 102 HTGNTSAASIPLAMAELLTTGAAKPGDLALLIGYGAGLSYAAQVVRM 148 (148)
T ss_dssp HHCBCGGGHHHHHHHHHHHHTSSCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred hhCCCccchHHHHHHHHHHcCCCCCCCEEEEEEEchhhhheEEEEeC
Confidence 99999999999999999999999999999999999999999999984
|
| >d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Pyrone synthase (PyS, chalcone synthase 2) species: Gerbera hybrid cultivar [TaxId: 18101]
Probab=99.87 E-value=5.5e-23 Score=188.08 Aligned_cols=113 Identities=20% Similarity=0.356 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHHHHHHhhCCCCcccchhhhhcccCcccch
Q 010144 354 REQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTS 433 (517)
Q Consensus 354 ~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNts 433 (517)
++++.++.+.+++.+.+++ +.+|++. +|||+|++||+|++|++.++++||++++++.+|++++++||||+
T Consensus 39 r~Vp~~~~~~v~~~v~~~l-------~~~gl~~---~di~~~v~Hqgg~~Ild~i~~~L~L~~~~l~~s~~vl~~yGNtS 108 (160)
T d1ee0a2 39 RDVPLMVAKNIENAAEKAL-------SPLGITD---WNSVFWMVHPGGRAILDQVERKLNLKEDKLRASRHVLSEYGNLI 108 (160)
T ss_dssp TTHHHHHHHHHHHHHHHHH-------GGGTCCC---GGGSEEEECCSSHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCG
T ss_pred chhHHHHHHHHHHHHHHHH-------hhccCCc---cccceEeecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCc
Confidence 4556666667778888887 7889984 99999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHcC----CCCC---CCEEEEEEechhHHhheeeeEEec
Q 010144 434 AGGLWYVLGYMEAKK----RLKK---GDRILMISLGAGFKCNNCVWEVMK 476 (517)
Q Consensus 434 SASi~~~L~~~~~~g----~i~~---Gd~VlliafG~G~t~~a~vlr~~~ 476 (517)
|||+|+.|+++.+++ +.+. +|+++++|||+|++|+++++|.+|
T Consensus 109 SaSI~~vL~~~~~~~~~~~~~~~g~~~d~~ll~afG~Glt~~~~llr~~~ 158 (160)
T d1ee0a2 109 SACVLFIIDEVRKRSMAEGKSTTGEGLDCGVLFGFGPGMTVETVVLRSVR 158 (160)
T ss_dssp GGHHHHHHHHHHHHHHHTTCSBTBTTBSEEEEEEEETTTEEEEEEEEECB
T ss_pred cchHHHHHHHHHhhhhhcCCCCcCCCcCEEEEEEEChHHHHHHHHHeecc
Confidence 999999999887643 3333 389999999999999999999876
|
| >d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.87 E-value=8.8e-23 Score=184.54 Aligned_cols=103 Identities=17% Similarity=0.264 Sum_probs=95.2
Q ss_pred HHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHHHHHHhhCCCCcccchhhhhcccCcccchhhHHHHHHHH
Q 010144 364 YYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGY 443 (517)
Q Consensus 364 v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~ 443 (517)
+.+.+.+++ +++|+++ +|||+|++||+|+++++.+++.||++++++..|+.++++||||+|||+|++|++
T Consensus 45 ~~~~i~~~l-------~~~g~~~---~did~~~~Hq~~~~i~~~i~~~Lgl~~~k~~~s~~~l~~~GN~~sasi~~~L~~ 114 (148)
T d1u0ma2 45 LAPALKELA-------GEHGWDA---SDLDFYIVHAGGPRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDALRR 114 (148)
T ss_dssp HHHHHHHHH-------HTTSCCS---SCCSCCEEECSHHHHHHHHHHHSCSCGGGGHHHHHHHHHTCBCTTHHHHHHHHH
T ss_pred HHHHHHHHH-------HHhCCCH---HHCCEEEECCCCHHHHHHHHHHhCCChhhhhHHHHHHHhcCCCCcchHHHHHHH
Confidence 445555666 7889996 899999999999999999999999999999888889999999999999999999
Q ss_pred HHHcCCCCCCCEEEEEEechhHHhheeeeEEec
Q 010144 444 MEAKKRLKKGDRILMISLGAGFKCNNCVWEVMK 476 (517)
Q Consensus 444 ~~~~g~i~~Gd~VlliafG~G~t~~a~vlr~~~ 476 (517)
+.++|++++||+|+++|||+|++|+++++||-.
T Consensus 115 ~~~~~~~~~Gd~ill~gfG~G~s~~~~llrW~~ 147 (148)
T d1u0ma2 115 LFDEGGVEEGARGLLAGFGPGITAEMSLGCWQT 147 (148)
T ss_dssp HHHSCCCCSSCCCEEEEEETTTEEEEEEEEEEC
T ss_pred HHHcCCCCCCCEEEEEEEchHhEeeEEEEEEcc
Confidence 999999999999999999999999999999953
|
| >d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Dihydropinosylvin synthase species: Scots pine (Pinus sylvestris) [TaxId: 3349]
Probab=99.86 E-value=1.8e-22 Score=184.04 Aligned_cols=114 Identities=18% Similarity=0.273 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHHHHHHhhCCCCcccchhhhhcccCcccc
Q 010144 353 LREQFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNT 432 (517)
Q Consensus 353 ~~e~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNt 432 (517)
++++++++.+.+++.+.+++ ++++++. +|||+|++||+|++|++.+++.||++++++.+|++++++||||
T Consensus 34 ~~~Vp~~v~~~i~~~~~~~l-------~~~~~~~---~did~~i~Hqgg~~Ild~v~~~L~L~~~k~~~s~~~l~~~GN~ 103 (156)
T d1u0ua2 34 KGAVPDLISANIENCMVEAF-------SQFKISD---WNKLFWVVHPGGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNM 103 (156)
T ss_dssp CTTHHHHHHHHHHHHHHHHH-------GGGTCCC---GGGSEEEECCSCHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBC
T ss_pred cchhHHHHHHHHHHHHHHHH-------HHcCCCh---hhCceEeecCCcHHHHHHHHHHhCCCcccchhhHHHHhhcCCC
Confidence 34555566666778888877 7889884 9999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHcC----CC---CCCCEEEEEEechhHHhheeeeEEec
Q 010144 433 SAGGLWYVLGYMEAKK----RL---KKGDRILMISLGAGFKCNNCVWEVMK 476 (517)
Q Consensus 433 sSASi~~~L~~~~~~g----~i---~~Gd~VlliafG~G~t~~a~vlr~~~ 476 (517)
||||+|+.|+++.+++ +. +.||+++++|||+|++|++++||.+.
T Consensus 104 sSasip~~L~~~~~~~~~~~~~~~~~~~~~~~~~gfG~Glt~~~~llr~~~ 154 (156)
T d1u0ua2 104 SSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFGFGPGLTIETVVLKSVP 154 (156)
T ss_dssp GGGHHHHHHHHHHHHHHHHTCSBSBTTBSEEEEEEEETTTEEEEEEEEECB
T ss_pred CcccHHHHHHHHHHhhhhccCCCcCCCCCEEEEEEECHHHhHHHHHHeeCc
Confidence 9999999999886543 32 35699999999999999999999864
|
| >d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=99.85 E-value=2.9e-22 Score=182.16 Aligned_cols=110 Identities=21% Similarity=0.329 Sum_probs=94.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCchhhhhCCCCCcccccceeecCCCChHHHHHHHhhCCCCcccchhhhhcccCcccchhh
Q 010144 356 QFRYVIQSYYENRIRKSTSSTKPEAVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAG 435 (517)
Q Consensus 356 ~~~~~~~~v~~~v~~~l~~~~~~~~~~g~~~d~~~did~~~~Hq~~~~il~~i~~~Lgl~~e~~~~S~~~l~~~GNtsSA 435 (517)
+++++.+.+++.+.+.+ +.+|++. +|+|+|++||+|++|++.++++||++++++..|++++++|||||||
T Consensus 36 Vp~~i~~~i~~~~~~~l-------~~~gl~~---~di~~~v~Hqgg~~Ild~v~~~L~L~~~~~~~s~~vl~~yGN~SSa 105 (154)
T d1bi5a2 36 VPGIVSKNITKALVEAF-------EPLGISD---YNSIFWIAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSA 105 (154)
T ss_dssp HHHHHHHHHHHHHHHHH-------GGGTCCC---TTSSEEEECCSSHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGG
T ss_pred hHHHHHHHHHHHHHHHH-------HHcCCCc---cccceEeeccccHHHHHHHHHHhCCCHHHHHHhHHHHHhcCCCCcc
Confidence 34444445666677777 7889884 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CCCCCC---CEEEEEEechhHHhheeeeEEe
Q 010144 436 GLWYVLGYMEAK----KRLKKG---DRILMISLGAGFKCNNCVWEVM 475 (517)
Q Consensus 436 Si~~~L~~~~~~----g~i~~G---d~VlliafG~G~t~~a~vlr~~ 475 (517)
|+|+.|+++.++ |+.++| |+++++|||+|++|+++++|.+
T Consensus 106 si~~vL~~~~~~~~~~~~~~~g~~~~~~~~~aFG~Glt~~~~llr~~ 152 (154)
T d1bi5a2 106 CVLFILDEMRKKSTQNGLKTTGEGLEWGVLFGFGPGLTIETVVLRSV 152 (154)
T ss_dssp HHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEEEETTTEEEEEEEEEC
T ss_pred cHHHHHHHHHHhhhccCCcccCCCcCEEEEEEEchHHhHHHHHHhcC
Confidence 999999988763 444444 8999999999999999999975
|
| >d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=98.99 E-value=3.2e-09 Score=101.74 Aligned_cols=176 Identities=11% Similarity=0.102 Sum_probs=117.2
Q ss_pred ceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCce-----------eEeccCCCcCCCCCC-
Q 010144 84 CCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGE-----------ETYGPRNVVEGREES- 151 (517)
Q Consensus 84 ~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~-----------r~~~~~~~~~~~~~~- 151 (517)
.|.|+|+|+..|.. .+.+++.+.+.. .++||.. +...... ..++..
T Consensus 3 rVaItG~G~vsp~g----~~~~e~w~~l~~----------------G~s~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 60 (249)
T d1j3na1 3 RVVVTGLGALTPIG----VGQEAFHKAQLA----------------GKSGVRPITRFDASALPVRIAAEVD--VDPGAYL 60 (249)
T ss_dssp CEEEEEEEEEETTE----ESHHHHHHHHHH----------------TCCCEEECCSSCCTTSSCCEEECCC--CCGGGTS
T ss_pred cEEEECCEeECCCc----CCHHHHHHHHHc----------------CCCccccCCccccccCCcccccccc--ccccccc
Confidence 49999999999987 788988876532 1123321 1110000 000000
Q ss_pred -ccHHHhHhhHHHHHHHHHHHHHHhCCCCCCCcC----EEEEeec-CC--------------------------CCCCcH
Q 010144 152 -PSLAEAFSEMDEIIFDTLDKLFARTDISPSEID----VLVVNVS-LF--------------------------SPAPSL 199 (517)
Q Consensus 152 -~~m~~~~~ea~~la~~Aa~~aL~~agi~p~dID----~LI~a~s-~~--------------------------~~~Ps~ 199 (517)
+...+.......++..|+++||+++|+++++++ .|+++++ .. ......
T Consensus 61 ~~~~~~~~d~~~~~~l~aa~~Al~dAGl~~~~~~~~~~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (249)
T d1j3na1 61 DRKELRRLDRFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMA 140 (249)
T ss_dssp CHHHHTTSCHHHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHH
T ss_pred cHHHHhhCCHHHHHHHHHHHHHHHHcCCChhHcCCccEEEEEEECCCcccccccccccccccCccccChhhhccccchhh
Confidence 111112234577899999999999999877643 4455432 10 011246
Q ss_pred HHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCC----------CCC----------
Q 010144 200 TSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN----------WYC---------- 259 (517)
Q Consensus 200 a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~----------~~~---------- 259 (517)
+.+|+..+|+++ +++.+.. +|++++.||..|.++|++|..+.+||.++|..... ...
T Consensus 141 ~~~is~~~gl~G--p~~tv~~-aCaSsl~Ai~~A~~~i~~G~~d~alvgg~d~~~~p~~~~~f~~~~~ls~~~~~p~~~~ 217 (249)
T d1j3na1 141 SAHIAMRYGFTG--PSSTVVT-ACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKAS 217 (249)
T ss_dssp HHHHHHHHTCCS--CBCCBCC-GGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHC
T ss_pred hhhhHhhcCCCC--Ccccccc-ccchHHHHHHHHHHHHHcCCCCeeeecchHhhhCcHHHHHHHhCCcccCCCCCCCCCC
Confidence 789999999974 7899997 99999999999999999999999999999975431 111
Q ss_pred -CCCccccccccccccceEEEEEeeccc
Q 010144 260 -GREKSMMLSNILFRSGGCSMLLTNNRA 286 (517)
Q Consensus 260 -~~dr~~lv~~~lfGDGAAAvLLs~~~~ 286 (517)
+-|.+. ...+.|+||+++||++...
T Consensus 218 rPFd~~~--dG~v~gEGa~~lvLe~~~~ 243 (249)
T d1j3na1 218 RPFTLSR--DGFVMGEGAGVLVLEAYEH 243 (249)
T ss_dssp CTTBTTC--CCBCBBCEEEEEEEEEHHH
T ss_pred CCccCCC--CCEeeEeEEEEEEEccHHH
Confidence 111111 1578999999999997654
|
| >d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=98.96 E-value=1.1e-08 Score=97.93 Aligned_cols=179 Identities=9% Similarity=0.072 Sum_probs=117.6
Q ss_pred CceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCC---------CcCC-CCCC-
Q 010144 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRN---------VVEG-REES- 151 (517)
Q Consensus 83 ~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~---------~~~~-~~~~- 151 (517)
|.|.|+|+|+..|-. .+.+++.+.+..- ++||..-...+.. +... .+..
T Consensus 2 rrVaItG~G~vtp~G----~~~~~~w~~L~~G----------------~s~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 61 (250)
T d2gfva1 2 RRVVVTGLGMLSPVG----NTVESTWKALLAG----------------QSGISLIDHFDTSAYATKFAGLVKDFNCEDII 61 (250)
T ss_dssp CCEEEEEEEEEBTTB----SSHHHHHHHHHTT----------------CCCEEECCSSCCTTCSCCEEECCTTCCCTTTS
T ss_pred CeEEEECCeeECCCc----CCHHHHHHHHHcC----------------CCeeecCCcccccccCCccceecccchhhhhh
Confidence 569999999999998 7888898876321 1233221100000 0000 0100
Q ss_pred -ccHHHhHhhHHHHHHHHHHHHHHhCCCCCCCcC----EEEEeecCC------------------CC--------CC-cH
Q 010144 152 -PSLAEAFSEMDEIIFDTLDKLFARTDISPSEID----VLVVNVSLF------------------SP--------AP-SL 199 (517)
Q Consensus 152 -~~m~~~~~ea~~la~~Aa~~aL~~agi~p~dID----~LI~a~s~~------------------~~--------~P-s~ 199 (517)
+...+.......++..|+++||+++|+++++.+ .++++++.. .. .| ..
T Consensus 62 ~~~~~~~~d~~~~~~l~aa~~Al~dAg~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (250)
T d2gfva1 62 SRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMV 141 (250)
T ss_dssp CHHHHTTSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHH
T ss_pred hhHHHhhcCHHHHHHHHHHHHHHHhcCCCccccCccceEEEEeeccCCcchhhhhHHHHhhccccccccchhhhhhhhHH
Confidence 111112234578899999999999999887654 344443210 01 12 24
Q ss_pred HHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCC----------CCCC----------
Q 010144 200 TSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGP----------NWYC---------- 259 (517)
Q Consensus 200 a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~----------~~~~---------- 259 (517)
+..|...||+++ +++.+.+ +|++++.||..|.++|++|..+.+||.++|.... ....
T Consensus 142 a~~ia~~~gl~G--p~~tv~~-aCaSg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~ 218 (250)
T d2gfva1 142 AGHLTIMYGLRG--PSISIAT-AQTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAAS 218 (250)
T ss_dssp HHHHHHHTTCCS--CEECCCC-GGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHC
T ss_pred HHHHHHHhCCCC--Ccccccc-ccchhhhhhHHHHHHHHcCCcchhhcccchhhcCcHHHHHHHhcccccCCCCCCCCcc
Confidence 788999999974 8889997 9999999999999999999999999999996432 0111
Q ss_pred -CCCccccccccccccceEEEEEeeccc
Q 010144 260 -GREKSMMLSNILFRSGGCSMLLTNNRA 286 (517)
Q Consensus 260 -~~dr~~lv~~~lfGDGAAAvLLs~~~~ 286 (517)
+-|+.. ...++|+||+++||++...
T Consensus 219 rPFD~~r--dG~v~gEGaa~lVLE~~~~ 244 (250)
T d2gfva1 219 RPWDKER--DGFVLGDGAGMLVLEEYEH 244 (250)
T ss_dssp CTTBTTC--CSBCBBCEEEEEEEEEHHH
T ss_pred CCCCCCC--CCEeeeeEEEEEEECcHHH
Confidence 112211 2578999999999997543
|
| >d1xpma2 c.95.1.2 (A:168-388) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS species: Staphylococcus aureus [TaxId: 1280]
Probab=98.94 E-value=2e-09 Score=101.91 Aligned_cols=96 Identities=19% Similarity=0.194 Sum_probs=80.1
Q ss_pred hhhCCCCCcccccceeecCCCChHHHHHHHhhCCCCc---------ccchhhhhcccCcccchhhHHHHHHHHHHHcCCC
Q 010144 380 AVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDE---------YDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRL 450 (517)
Q Consensus 380 ~~~g~~~d~~~did~~~~Hq~~~~il~~i~~~Lgl~~---------e~~~~S~~~l~~~GNtsSASi~~~L~~~~~~g~i 450 (517)
++.|.++ +|+|++|+|++..++.....+.|.... .++++|...-++.|||.+||+++.|..+++.+..
T Consensus 51 ~~~g~~~---~dfd~~~fH~P~~km~~ka~~~l~~~~~~~~~~~~~~~~~~s~~~~~~iGN~YTaSlyl~L~Sll~~~~~ 127 (221)
T d1xpma2 51 KRQGKSL---ADFASLCFHVPFTKMGKKALESIIDNADETTQERLRSGYEDAVDYNRYVGNIYTGSLYLSLISLLENRDL 127 (221)
T ss_dssp HHHTCCG---GGCSEEEECCSSHHHHHHHHHTTGGGSCHHHHHHHHHHHHHHTTGGGGTCCCGGGHHHHHHHHHHHHSCC
T ss_pred HHcCCCh---hhhheEEeecCchhhHHHHHHHHHhccchhhHHHHHHhhhhHHHHHHhcCCcchHHHHHHHHhhhccccC
Confidence 5667774 899999999999999888777775332 3566666667889999999999999999999888
Q ss_pred CCCCEEEEEEechhHHhheeeeEEeccC
Q 010144 451 KKGDRILMISLGAGFKCNNCVWEVMKDL 478 (517)
Q Consensus 451 ~~Gd~VlliafG~G~t~~a~vlr~~~~~ 478 (517)
.+|++|.++|+|+|......-+++..+.
T Consensus 128 ~~G~rIglfSYGSG~~ae~fs~~V~~~~ 155 (221)
T d1xpma2 128 QAGETIGLFSYGSGSVGEFYSATLVEGY 155 (221)
T ss_dssp CTTCEEEEEEEETTTEEEEEEEEECTTG
T ss_pred CCCCEEEEEEecCCcceeEEEEEEcccH
Confidence 9999999999999998887778776544
|
| >d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=98.80 E-value=1.1e-08 Score=99.76 Aligned_cols=95 Identities=14% Similarity=0.188 Sum_probs=85.3
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCC--CCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHH
Q 010144 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLF--SPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLF 237 (517)
Q Consensus 160 ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~--~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL 237 (517)
.+.+|+..|++++|+++|++|++||.||++|... ......+.++.-..|++.+++++.|+. .|++++.|+.+|.+.|
T Consensus 23 ~~~dL~~~a~~~al~~~~i~~~~Id~vi~G~v~~~g~~~~n~aR~~al~aGlp~~vp~~tVn~-~CaSg~~Ai~~a~~~I 101 (273)
T d1ulqa1 23 RPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEVAGCTVNR-LCGSGLEAVAQAARAI 101 (273)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTCEEEEEEC-GGGHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCccceEEEec-ccchHHHHHHHHHHHH
Confidence 4567899999999999999999999999986532 234567888888999998899999996 9999999999999999
Q ss_pred HcCCCCEEEEEEecCCCC
Q 010144 238 RTYKNKLAIVVSTESMGP 255 (517)
Q Consensus 238 ~ag~~~~aLVVs~E~~s~ 255 (517)
++|..+.+|+++.|.+|.
T Consensus 102 ~~G~~d~~lagG~EsmS~ 119 (273)
T d1ulqa1 102 WAGEGKVYIGSGVESMSR 119 (273)
T ss_dssp HTTSCSEEEEEEEEESSS
T ss_pred hcCCCccceeeeccccch
Confidence 999999999999999997
|
| >d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=98.78 E-value=1.4e-07 Score=89.44 Aligned_cols=179 Identities=10% Similarity=0.044 Sum_probs=116.6
Q ss_pred CCceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCcee-----------Ee--ccCCCcCCC
Q 010144 82 GQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEE-----------TY--GPRNVVEGR 148 (517)
Q Consensus 82 ~~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r-----------~~--~~~~~~~~~ 148 (517)
.+.|-|+|+|+..|-. .+.+++.+.+..- ++||... .. .+.......
T Consensus 1 ~~rVaItG~G~v~p~G----~~~~~~w~~L~~G----------------~~~i~~~~~~~~~~~~~~~~g~~~~~~~~~~ 60 (250)
T d1e5ma1 1 KKRVVVTGLGAITPIG----NTLQDYWQGLMEG----------------RNGIGPITRFDASDQACRFGGEVKDFDATQF 60 (250)
T ss_dssp CCCEEEEEEEEEBTTB----SSHHHHHHHHHTT----------------CCCEEECCSSCCTTSSCCEEECCCSCCGGGT
T ss_pred CCeEEEECCeeECCCC----CCHHHHHHHHHcC----------------CCeeccCCccccccccccccceeeecccccc
Confidence 3679999999999998 7888888876321 1222211 11 000000000
Q ss_pred CCCccHHHhHhhHHHHHHHHHHHHHHhCCCCCCCcC----EEEEeecC------------------CCCCC---------
Q 010144 149 EESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEID----VLVVNVSL------------------FSPAP--------- 197 (517)
Q Consensus 149 ~~~~~m~~~~~ea~~la~~Aa~~aL~~agi~p~dID----~LI~a~s~------------------~~~~P--------- 197 (517)
. .....+.......++..++.+||+++|++++.+. .++++++. ....|
T Consensus 61 ~-~~~~~~~~d~~~~~~~~a~~~Al~~Agl~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (250)
T d1e5ma1 61 L-DRKEAKRMDRFCHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIAN 139 (250)
T ss_dssp S-CHHHHHTSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTT
T ss_pred c-chhhhhhcCcHHHHHHHHHHHHHHHcCCChHhhcCCcceEEEEEeeccccchhhhhHHHhhcCccccCcccchhhhcc
Confidence 0 0011112234467899999999999999876542 34444321 01111
Q ss_pred cHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCC----------CCC--------
Q 010144 198 SLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN----------WYC-------- 259 (517)
Q Consensus 198 s~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~----------~~~-------- 259 (517)
..+..|+..||+++ +++.+.. +|++++.||.+|.++|++|..+.+||.++|..... ...
T Consensus 140 ~~a~~is~~~gl~G--p~~tv~~-ACsS~l~Ai~~A~~~i~~G~~d~~lvGg~~~~~~~~~~~~f~~~~~ls~~~~~p~~ 216 (250)
T d1e5ma1 140 MASGLTAINLGAKG--PNNCTVT-ACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLH 216 (250)
T ss_dssp HHHHHHHHHHTCCS--CEECCCC-GGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCGGG
T ss_pred hhhhhHHHhccCCC--CCccccc-cchhhhhhhHHHhhcccCCcccccccccchhhcCcHHHHHHHhcCCccCCCCCCCC
Confidence 24778899999974 8889997 99999999999999999999999999999974320 111
Q ss_pred ---CCCccccccccccccceEEEEEeeccc
Q 010144 260 ---GREKSMMLSNILFRSGGCSMLLTNNRA 286 (517)
Q Consensus 260 ---~~dr~~lv~~~lfGDGAAAvLLs~~~~ 286 (517)
+-|+.. ...+.|+||+++||++.+.
T Consensus 217 ~~rPFD~~~--dG~~~gEGa~~~vLe~l~~ 244 (250)
T d1e5ma1 217 ASRPFDKDR--DGFVMGEGSGILILEELES 244 (250)
T ss_dssp TCCTTBTTC--CSBCBBCEEEEEEEEEHHH
T ss_pred ccCCCCCCC--CCEeeEeeEEEEEEeeHHH
Confidence 112111 2578999999999987543
|
| >d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=98.76 E-value=1.7e-08 Score=98.29 Aligned_cols=95 Identities=13% Similarity=0.165 Sum_probs=86.1
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHH
Q 010144 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (517)
Q Consensus 160 ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ 238 (517)
.+.+|+..+++++|+++|++|++||.|+++|. +....+..+.+++-..|++..++++.|+. .|++++.|+.+|.+.|+
T Consensus 26 ~~~dL~~~~~~~~l~~~~i~~~~Id~vi~G~~~~~~~~~n~ar~~al~aglp~~vpa~tv~~-~C~Sg~~Ai~~Aa~~I~ 104 (268)
T d1m3ka1 26 PAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEATAWGMNQ-LAGSGLRAVALGMQQIA 104 (268)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSEEEEEEC-GGGHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCcEEEEeeccccCcchHHHhHHHHHhCCcccccceeecc-cCcccchHHHHHHHHHh
Confidence 45678999999999999999999999999864 33346778889999999998899999996 99999999999999999
Q ss_pred cCCCCEEEEEEecCCCC
Q 010144 239 TYKNKLAIVVSTESMGP 255 (517)
Q Consensus 239 ag~~~~aLVVs~E~~s~ 255 (517)
+|..+.+|+++.|.+|.
T Consensus 105 ~G~~dvvlagG~EsmS~ 121 (268)
T d1m3ka1 105 TGDASIIVAGGMESMSM 121 (268)
T ss_dssp TTSCSCEEEEEEEESTT
T ss_pred CCCceEEeecccccccc
Confidence 99999999999999986
|
| >d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=98.59 E-value=8.9e-08 Score=92.70 Aligned_cols=94 Identities=16% Similarity=0.217 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCCcCEEEEeec-CC-CCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHH
Q 010144 161 MDEIIFDTLDKLFAR-TDISPSEIDVLVVNVS-LF-SPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLF 237 (517)
Q Consensus 161 a~~la~~Aa~~aL~~-agi~p~dID~LI~a~s-~~-~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL 237 (517)
+.+|+..+++++|++ +|++|++||.||++|. +. ...+.++..+.-..|++..++++.|+. .|++++.|+.+|.+.|
T Consensus 30 ~~dL~~~~i~~~l~r~agi~~~~Id~vi~G~v~~~~~~g~n~aR~~al~ag~p~~vp~~tV~~-~C~Sgl~Ai~~aa~~I 108 (262)
T d1wdkc1 30 AEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSR-LCGSSMSALHTAAQAI 108 (262)
T ss_dssp HHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSSCTTSEEEEEEC-GGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCHHHeeEEEEEeecccccccccchhhhHhhhhcccccchhhccc-cccHHHHHHHHHHHHH
Confidence 456789999999996 8999999999999864 32 235677888888899998999999996 9999999999999999
Q ss_pred HcCCCCEEEEEEecCCCC
Q 010144 238 RTYKNKLAIVVSTESMGP 255 (517)
Q Consensus 238 ~ag~~~~aLVVs~E~~s~ 255 (517)
.+|..+.+|.++.|.+|.
T Consensus 109 ~sG~~dvvlAgGvEsmS~ 126 (262)
T d1wdkc1 109 MTGNGDVFVVGGVEHMGH 126 (262)
T ss_dssp HTTSCSEEEEEEEEETTT
T ss_pred HhhcCCceeeeccccccc
Confidence 999999999999999987
|
| >d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.50 E-value=6.3e-07 Score=83.07 Aligned_cols=148 Identities=9% Similarity=0.103 Sum_probs=100.6
Q ss_pred CceEEEEEEEEeCCCCCceecHHHHHHHHHhcccCChHHHHHHHHHHHHhCCceeEeccCCCcC------CCCC------
Q 010144 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVE------GREE------ 150 (517)
Q Consensus 83 ~~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~------~~~~------ 150 (517)
|.|-|+|+|+..|-. .+.+++.+.+.. .++||.+-.+..+.... .+..
T Consensus 1 rRVvItG~G~v~p~G----~~~~~~w~~L~~----------------G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 60 (216)
T d1tqya1 1 RRVVITGVGVRAPGG----NGTRQFWELLTS----------------GRTATRRISFFDPSPYRSQVAAEADFDPVAEGF 60 (216)
T ss_dssp CCEEEEEEEEEETTE----ESHHHHHHHHHH----------------TCCCEEECCSSCCTTSSCCEEECCCCCHHHHTC
T ss_pred CeEEEEeceeECCCC----CCHHHHHHHHHc----------------CCCEeecCCccCCCccccccccccccccccccc
Confidence 468999999999998 688888876532 12344432221111000 0000
Q ss_pred CccHHHhHhhHHHHHHHHHHHHHHhCCCCCCCcC-----EEEEeecC-----------------C----------CC---
Q 010144 151 SPSLAEAFSEMDEIIFDTLDKLFARTDISPSEID-----VLVVNVSL-----------------F----------SP--- 195 (517)
Q Consensus 151 ~~~m~~~~~ea~~la~~Aa~~aL~~agi~p~dID-----~LI~a~s~-----------------~----------~~--- 195 (517)
.+...........++..|+++||+++|+++++++ .++..+.. . +.
T Consensus 61 ~~~~~~~~~~~~~~~l~aa~~Al~dAg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (216)
T d1tqya1 61 GPRELDRMDRASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDY 140 (216)
T ss_dssp CHHHHHHSCHHHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHH
T ss_pred ChhhhcccCcchhhHHHHHHHHHHHhcCCccccccccccccccccccccchhhHHHhhhhhcccccccchhhcccccccc
Confidence 0111222345678999999999999999987654 33332210 0 01
Q ss_pred -CC-cHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCC
Q 010144 196 -AP-SLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESM 253 (517)
Q Consensus 196 -~P-s~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~ 253 (517)
.| ..+..|...+|+++ +++.+.. +|++++.||..|.++|++|..+.+||.++|..
T Consensus 141 ~~~~~~a~~ia~~~g~~G--p~~tv~~-ACaS~~~Ai~~A~~~i~~G~~d~~ivGG~d~~ 197 (216)
T d1tqya1 141 LVPSVMPAEVAWAVGAEG--PVTMVST-GCTSGLDSVGNAVRAIEEGSADVMFAGAADTP 197 (216)
T ss_dssp HSTTHHHHHHHHHHTCCS--CEEEECC-GGGHHHHHHHHHHHHHHHTSCSEEEEEEEECC
T ss_pred cCchHHHHHHHHhcCccc--cceeecc-ccchHHHHHHHHHHHHHcCCCCEEEEeeeccc
Confidence 12 24688999999974 8899997 99999999999999999999999999999964
|
| >d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=98.44 E-value=3.8e-06 Score=79.66 Aligned_cols=121 Identities=8% Similarity=0.062 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCC-----cCEEEEe-ecC-----------------CCC--------CC-cHHHHHHHHcC
Q 010144 161 MDEIIFDTLDKLFARTDISPSE-----IDVLVVN-VSL-----------------FSP--------AP-SLTSRIINRYN 208 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p~d-----ID~LI~a-~s~-----------------~~~--------~P-s~a~~I~~~LG 208 (517)
....+..|.++++++++....+ ...++.. ... ... .+ .++.+|+..||
T Consensus 88 ~~~~a~~a~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~ 167 (270)
T d2ix4a1 88 FIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYG 167 (270)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHhhhccccccccccceEEeeccccccccchhhcchhhhccccccCcccCcccccchhHHHHHHHhC
Confidence 3566778889999988765433 1233222 110 011 11 25789999999
Q ss_pred CCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCC----------CCC------------CCCcccc
Q 010144 209 LRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN----------WYC------------GREKSMM 266 (517)
Q Consensus 209 l~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~----------~~~------------~~dr~~l 266 (517)
+++ +++.+.+ +|++++.||..|.++|++|..+.+||.++|..... ... +-|...
T Consensus 168 l~G--p~~~v~~-aCaSsl~Ai~~A~~~l~~G~~d~aivgg~~~~~~p~~~~~~~~~~~ls~~~~~~p~~~~rPFD~~a- 243 (270)
T d2ix4a1 168 FQG--PNHAAVT-ACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCDR- 243 (270)
T ss_dssp CCS--CEECBCC-GGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGGSCCTTBTTC-
T ss_pred CCC--CCccccc-ccchhhHHHHHHHHHHHcCCCCeeccccchhhhhhhhHHHHHhcccccCCCCCCCCCccCCCCCCC-
Confidence 974 8899998 99999999999999999999999999999875431 110 111111
Q ss_pred ccccccccceEEEEEeeccc
Q 010144 267 LSNILFRSGGCSMLLTNNRA 286 (517)
Q Consensus 267 v~~~lfGDGAAAvLLs~~~~ 286 (517)
...+.|+||+++||++...
T Consensus 244 -~G~v~gEGaa~~vLe~l~~ 262 (270)
T d2ix4a1 244 -DGFVIGEGSGVIVLEEYEH 262 (270)
T ss_dssp -CSBCBBCEEEEEEEEEHHH
T ss_pred -CCEeeEeeEEEEEEeeHHH
Confidence 2678999999999997654
|
| >d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=98.42 E-value=4.5e-06 Score=78.83 Aligned_cols=186 Identities=9% Similarity=0.145 Sum_probs=115.4
Q ss_pred ceEEEEEEEEeCCCCCceecHHHHHHHHHhcc-cCChHHHHHHHHHHHHhCCceeEeccCCCcCCCCCCccHHH--hHhh
Q 010144 84 CCYMLAYECYKPCDETRRLDTESCARVVWRNK-KLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAE--AFSE 160 (517)
Q Consensus 84 ~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~-~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~~~~~~~~~m~~--~~~e 160 (517)
.|-|+|+|+..|-. .+.+++.+.+..-. ...+- .+ ++..+............ +....+-.. ....
T Consensus 3 RVvITG~G~i~p~G----~~~~~~w~~L~~G~sgi~~~-----~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 70 (253)
T d2vbaa1 3 RAVITGLGIVSSIG----NNQQEVLASLREGRSGITFS-----QE-LKDSGMRSHVWGNVKLD--TTGLIDRKVVRFMSD 70 (253)
T ss_dssp CEEEEEEEEEBTTB----SSHHHHHHHHHHTCCCEEEC-----HH-HHHTTCSCCEEECCCCC--CTTSSCHHHHTTCCH
T ss_pred cEEEEccEEECCCC----CCHHHHHHHHHcCCCccccC-----Cc-cccccCccccccccccc--ccccccchhhccchh
Confidence 49999999999998 78899887763210 01110 01 23344444333222110 111111111 1233
Q ss_pred HHHHHHHHHHHHHHhCCCCC------CCcCEEEEeecC-------------CC--------------CCCcHHHHHHHHc
Q 010144 161 MDEIIFDTLDKLFARTDISP------SEIDVLVVNVSL-------------FS--------------PAPSLTSRIINRY 207 (517)
Q Consensus 161 a~~la~~Aa~~aL~~agi~p------~dID~LI~a~s~-------------~~--------------~~Ps~a~~I~~~L 207 (517)
...+...+++++++.+++.+ ..++.++-.+.. .. ..-.++..|...+
T Consensus 71 ~~~~~~~~~~~a~~~~~l~~~~~~~~~r~g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 150 (253)
T d2vbaa1 71 ASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPF 150 (253)
T ss_dssp HHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTT
T ss_pred hhhhhhHHHHHHHHHhhccchhccCCCCEEEEeccccccccccccccccccccCCccccCchhhhccccccccceecccc
Confidence 45678889999999888763 234433322110 00 0123577899999
Q ss_pred CCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecCCCCC----------CC-----------CCCCcccc
Q 010144 208 NLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN----------WY-----------CGREKSMM 266 (517)
Q Consensus 208 Gl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~~s~~----------~~-----------~~~dr~~l 266 (517)
|+++ +++.+.. +|++++.||..|.++|+.|..+.+||.++|.+... .. .+-|.+.
T Consensus 151 g~~G--p~~~i~t-aCaSsl~Ai~~A~~~i~~G~~d~alvgg~~~~~~~~~~~~~~~~~ls~~~~~~P~~~~rPFD~~~- 226 (253)
T d2vbaa1 151 KIHG--VNYSISS-ACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTYDAHR- 226 (253)
T ss_dssp TCCS--CEEEEEC-GGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHHTTCBCCSCTTSGGGSCCTTBTTC-
T ss_pred Cccc--ceeeeec-cchhHHHHHHHHHHhcchhccceeeecchhhhhcchhhhHHHHHHHhcCCCCCCCCCCCCCCCCC-
Confidence 9974 8888887 99999999999999999999999999999976430 00 0011111
Q ss_pred ccccccccceEEEEEeeccc
Q 010144 267 LSNILFRSGGCSMLLTNNRA 286 (517)
Q Consensus 267 v~~~lfGDGAAAvLLs~~~~ 286 (517)
..++.|+||+++||++.+.
T Consensus 227 -~G~v~gEGa~~lvLe~le~ 245 (253)
T d2vbaa1 227 -DGFVIAGGGGMVVVEELEH 245 (253)
T ss_dssp -CSBCBBCEEEEEEEEEHHH
T ss_pred -CCEeeeeEEEEEEEccHHH
Confidence 2578999999999997554
|
| >d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.31 E-value=5e-07 Score=87.63 Aligned_cols=94 Identities=14% Similarity=0.211 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHHHhC----CCCCCCcCEEEEeecC-CCCCCcHHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHH
Q 010144 161 MDEIIFDTLDKLFART----DISPSEIDVLVVNVSL-FSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQ 235 (517)
Q Consensus 161 a~~la~~Aa~~aL~~a----gi~p~dID~LI~a~s~-~~~~Ps~a~~I~~~LGl~~~~~~~dl~~mgCsggl~AL~lA~~ 235 (517)
+.+|+..+++++++++ +++|++||.||++|.. .-..+..+.++.-.-|++..++++.|+. .|++++.|+..|.+
T Consensus 35 ~~~L~~~~i~~~l~r~~~~~~idp~~Id~vi~G~v~~~g~~~~~aR~~al~aglp~~vpa~tVnr-~CaSg~~Ai~~Aa~ 113 (269)
T d1afwa1 35 TDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRAACLASGIPYSTPFVALNR-QCSSGLTAVNDIAN 113 (269)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTSCEEEEEC-GGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCccccCChhhcCEEEeccccccccccccchhhhhhccccccccchhccc-cchHHHHHHHHHHH
Confidence 3456788999999865 6999999999998642 2223456777888889998999999996 99999999999999
Q ss_pred HHHcCCCCEEEEEEecCCCC
Q 010144 236 LFRTYKNKLAIVVSTESMGP 255 (517)
Q Consensus 236 lL~ag~~~~aLVVs~E~~s~ 255 (517)
.|++|..+.+|+++.|.+|.
T Consensus 114 ~I~~G~~divlagG~EsmS~ 133 (269)
T d1afwa1 114 KIKVGQIDIGLALGVESMTN 133 (269)
T ss_dssp HHHTTSCSEEEEEEEEEHHH
T ss_pred HHhhccccceeeeecccccc
Confidence 99999999999999999886
|
| >d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.17 E-value=7.7e-06 Score=75.06 Aligned_cols=152 Identities=14% Similarity=0.075 Sum_probs=95.3
Q ss_pred ceEEEEEEEEeCCCCCceecHHHHHHHHHhcc-cCChHHHHHHHHHHHHhCCceeEeccCCCc----CCCCCCccHHHhH
Q 010144 84 CCYMLAYECYKPCDETRRLDTESCARVVWRNK-KLGLEEYRFLLKNMVSSGIGEETYGPRNVV----EGREESPSLAEAF 158 (517)
Q Consensus 84 ~v~I~~~g~ylP~~~~~~vs~ee~~~~~~~~~-~~~~~~~~~~~ri~~~sGI~~r~~~~~~~~----~~~~~~~~m~~~~ 158 (517)
.|.|+|+|+..|.. .+.+++.+.+..-. ...+-+ + +...+...+.......+ ..++ ......
T Consensus 1 ~VvITG~G~vsp~g----~~~~~~w~~L~~G~sgi~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 67 (208)
T d1tqyb1 1 SVLITGVGVVAPNG----LGLAPYWSAVLDGRHGLGPVT-R-----FDVSRYPATLAGQIDDFHAPDHIPG---RLLPQT 67 (208)
T ss_dssp CEEEEEEEEEETTE----ESHHHHHHHHHTTCCCEEECT-T-----TTGGGSSCCEEECCCSCCHHHHSCT---TTGGGC
T ss_pred CEEEEcceeECCCc----CCHHHHHHHHHcCCCceecCc-c-----cCchhcccccccccccccccccCCh---hHhhcc
Confidence 48899999999998 68888887663210 000000 0 00011111111000000 0001 111122
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCcC----EEEEeecC----------------C--C--------CCC-cHHHHHHHHc
Q 010144 159 SEMDEIIFDTLDKLFARTDISPSEID----VLVVNVSL----------------F--S--------PAP-SLTSRIINRY 207 (517)
Q Consensus 159 ~ea~~la~~Aa~~aL~~agi~p~dID----~LI~a~s~----------------~--~--------~~P-s~a~~I~~~L 207 (517)
.....++..|+.+||+++|+++++++ .++++++. . . ..| ..+.+|...|
T Consensus 68 ~~~~~~~~~a~~~Al~~Ag~~~~~~~~~~~g~~~g~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~ia~~~ 147 (208)
T d1tqyb1 68 DPSTRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRH 147 (208)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHH
T ss_pred ccccccccccccccchhhhcccccccccccccccccccccccccchhhhhhccccccccccccccccccccccchhhhcc
Confidence 34467899999999999999987764 34444210 0 0 122 2478899999
Q ss_pred CCCCCeeEEEecCCcchHHHHHHHHHHHHHHcCCCCEEEEEEecC
Q 010144 208 NLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTES 252 (517)
Q Consensus 208 Gl~~~~~~~dl~~mgCsggl~AL~lA~~lL~ag~~~~aLVVs~E~ 252 (517)
|+++ +++.+.. +|++++.||..|.++|+.| .+.+||.++|.
T Consensus 148 gl~G--p~~tv~t-ACaS~l~Ai~~A~~~I~~G-~d~~lvGG~d~ 188 (208)
T d1tqyb1 148 GMRG--PSSALVA-EQAGGLDALGHARRTIRRG-TPLVVSGGVDS 188 (208)
T ss_dssp TCCS--SCEEEEC-GGGHHHHHHHHHHHHHHHT-CSEEEEEEEEC
T ss_pred cccc--eeeeccc-cccHHHHHHHHHHHHHHcC-CCEEEECcccc
Confidence 9985 6777887 9999999999999999999 79999999986
|
| >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.77 E-value=0.002 Score=56.01 Aligned_cols=88 Identities=16% Similarity=0.189 Sum_probs=63.3
Q ss_pred HhhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEe----cCCcchHHHHHHHHH
Q 010144 158 FSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNL----SGMGCSASVVAVDLV 233 (517)
Q Consensus 158 ~~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl----~~mgCsggl~AL~lA 233 (517)
.+.+...+.++++++|+++|++++|||.+|... ..+..-..++++||++++-...++ +++++++...+|+.|
T Consensus 43 f~~a~~~v~~~i~~~L~~~gl~~~dId~~i~Hq----a~~~i~~~v~~~lgl~~ek~~~~~~~~~GNt~sasip~~L~~a 118 (148)
T d1u6ea2 43 FRWAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQ----ANSRINELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAEL 118 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGCCEEEECC----SCHHHHHHHHHHHTCCTTCEECCTHHHHCBCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcccccEEEecc----ccHHHHHHHHHhcCCCchhhhhhhHHhhCCCccchHHHHHHHH
Confidence 356777788999999999999999999998653 235667889999999865444333 556667777777766
Q ss_pred HHHHHcCCCCEEEEEE
Q 010144 234 QQLFRTYKNKLAIVVS 249 (517)
Q Consensus 234 ~~lL~ag~~~~aLVVs 249 (517)
.+-=.-.+.+++|+++
T Consensus 119 ~~~g~i~~Gd~vll~g 134 (148)
T d1u6ea2 119 LTTGAAKPGDLALLIG 134 (148)
T ss_dssp HHHTSSCTTCEEEEEE
T ss_pred HHcCCCCCCCEEEEEE
Confidence 5542233456777665
|
| >d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=96.17 E-value=0.0044 Score=53.62 Aligned_cols=88 Identities=14% Similarity=0.164 Sum_probs=60.0
Q ss_pred HhhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEe---cCCcchHHHHHHHHHH
Q 010144 158 FSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNL---SGMGCSASVVAVDLVQ 234 (517)
Q Consensus 158 ~~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl---~~mgCsggl~AL~lA~ 234 (517)
.+.+.....++++++|+++|++++|||.+|... ..+.....++++||++++-...++ ++++.++...+|+.+.
T Consensus 42 f~~a~~~vp~~i~~~L~~~g~~~~dId~~i~Hq----a~~~~~~~i~~~lgi~~~k~~~~~~~~Gn~~sasip~~L~~~~ 117 (149)
T d1ub7a2 42 FKFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQ----ANLRIIDAARERLGLPWERVAVNVDRYGNTSTASIPLALKEAV 117 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECC----SCHHHHHHHHHTTTCCGGGBCCCHHHHCBCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhccccccccEEEeec----cchHHHHHHHhhccchhhHHHHHHHHhcCCcchhHHHHHHHHH
Confidence 356677778999999999999999999998654 345677889999999865433333 3344455555555444
Q ss_pred HHHHcCCCCEEEEEE
Q 010144 235 QLFRTYKNKLAIVVS 249 (517)
Q Consensus 235 ~lL~ag~~~~aLVVs 249 (517)
+--.-.+.+++|+++
T Consensus 118 ~~~~~~~Gd~vll~g 132 (149)
T d1ub7a2 118 DAGRIREGDHVLLVS 132 (149)
T ss_dssp HHTSSCTTCEEEEEE
T ss_pred HcCCCCCCCEEEEEE
Confidence 332234566777766
|
| >d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=95.99 E-value=0.033 Score=49.98 Aligned_cols=89 Identities=11% Similarity=0.048 Sum_probs=61.6
Q ss_pred hhhCCCCCcccccceeecCCCChHHHHHHH-----hhCCCCcccchhhhhcccCcccchhhHHHHHHHH---HHHcCCCC
Q 010144 380 AVLGAGLNLKAGIEHFCLHPGGRAVIDGTG-----KGLELDEYDLEPARMALHRFGNTSAGGLWYVLGY---MEAKKRLK 451 (517)
Q Consensus 380 ~~~g~~~d~~~did~~~~Hq~~~~il~~i~-----~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~---~~~~g~i~ 451 (517)
+++++.| +||+++..|..+...-|.++ +.++-..-.+ ..+=..+||+.+|+-.+.|.. +++.|.+.
T Consensus 73 ~~a~i~~---~di~~v~ahgtGt~~~D~~E~~al~~~f~~~~~~v---~s~K~~~GH~~~AsG~~~li~~~~~l~~g~ip 146 (194)
T d1tqyb2 73 NDAGTGP---EDVDVVFADGAGVPELDAAEARAIGRVFGREGVPV---TVPKTTTGRLYSGGGPLDVVTALMSLREGVIA 146 (194)
T ss_dssp HHHTCCG---GGCCEEECCCCCSHHHHHHHHHHHHHHHCTTCSEE---ECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBC
T ss_pred ccccccc---cceeeeeccccCcccccHHHhhhhhhhhhcccccc---ccccccccccccccccceehhhhhhhhhceec
Confidence 5788886 99999999998888776543 4454322122 223367899999997766653 34455331
Q ss_pred ------------------------CCCEEEEEEechhHHhheeeeEE
Q 010144 452 ------------------------KGDRILMISLGAGFKCNNCVWEV 474 (517)
Q Consensus 452 ------------------------~Gd~VlliafG~G~t~~a~vlr~ 474 (517)
+-++++..+||.|-+.++++++.
T Consensus 147 p~~~~~~~~~~~~~~~v~~~~~~~~~~~a~v~s~GfgG~na~~vl~~ 193 (194)
T d1tqyb2 147 PTAGVTSVPREYGIDLVLGEPRSTAPRTALVLARGRWGFNSAAVLRR 193 (194)
T ss_dssp CBCSCCCCCGGGCCEECBSSCBCCCCSEEEEEEEETTTEEEEEEEEE
T ss_pred cccCCCCCCcccCccccCCCCccCCCCEEEEECcCCCceeEEEEEee
Confidence 23578899999998888888874
|
| >d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=95.81 E-value=0.016 Score=50.18 Aligned_cols=89 Identities=9% Similarity=0.129 Sum_probs=56.8
Q ss_pred hHhhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeE-EEecCCc-chH--HHHHHHH
Q 010144 157 AFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKA-FNLSGMG-CSA--SVVAVDL 232 (517)
Q Consensus 157 ~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~-~dl~~mg-Csg--gl~AL~l 232 (517)
-.+.|.....++++++|+++|++++|||.+|+... .+..-..++++||++++-.. .++...| |++ -..+|+.
T Consensus 42 v~~~av~~vp~~i~~~L~~~gl~~~dId~~i~Hq~----~~~~~~~v~~~lgi~~ek~~~~~~~~~GNt~Sasip~~L~~ 117 (153)
T d1mzja2 42 VFRWAVADVVPAAREALEVAGLTVGDLVAFVPHQA----NLRIIDVLVDRLGVPEHVVVSRDAEDTGNTSSASVALALDR 117 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCGGGCSEEEECCS----CHHHHHHHHHHHTCCTTSEECCTHHHHCBCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCcccCCEEEEcCC----cHHHHHHHHHHhCCCchhcchhhhhhcCCcccchHHHHHHH
Confidence 34567778888999999999999999999987542 35677889999999755332 2333223 333 3444544
Q ss_pred HHHHHHcCCCCEEEEEE
Q 010144 233 VQQLFRTYKNKLAIVVS 249 (517)
Q Consensus 233 A~~lL~ag~~~~aLVVs 249 (517)
+.+--+..+.+++|+++
T Consensus 118 ~~~~~~~~~Gd~ill~~ 134 (153)
T d1mzja2 118 LVRSGAVPGGGPALMIG 134 (153)
T ss_dssp HHHHTSSCTTCEEEEEE
T ss_pred HHHcCCCCCCCEEEEEE
Confidence 43321122345555554
|
| >d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=95.66 E-value=0.022 Score=51.55 Aligned_cols=90 Identities=12% Similarity=0.011 Sum_probs=60.1
Q ss_pred hhhCCCCCcccccceeecCCCChHHHHHH-----HhhCCCCcccchhhhhcccCcccchhhHHHHHHHHH---HHcCCC-
Q 010144 380 AVLGAGLNLKAGIEHFCLHPGGRAVIDGT-----GKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYM---EAKKRL- 450 (517)
Q Consensus 380 ~~~g~~~d~~~did~~~~Hq~~~~il~~i-----~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~---~~~g~i- 450 (517)
+++++.| +||+++-.|..+...-|.+ .+.++-....+. --..=..+||+.+|+-.+.|... ++.|.+
T Consensus 76 ~~a~i~~---~~i~~ie~hgtGt~~~D~~E~~ai~~~~~~~~~~~~-v~s~K~~~GH~~~AsG~~~li~~~~~l~~g~ip 151 (205)
T d1tqya2 76 DESRTDA---TDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTP-VSSIKSMVGHSLGAIGSLEIAACVLALEHGVVP 151 (205)
T ss_dssp HHHTCCG---GGCCEEECCCCCCHHHHHHHHHHHHHHTGGGGGGSC-EECTHHHHCBCTTTHHHHHHHHHHHHHHHCEEC
T ss_pred hhhcCCc---cceeeeeccccccccCchhHHHHHHHhhccccCCce-eeeecccccccccccchhHHHHHHHHHhCCeEc
Confidence 5788886 9999999999988876544 444543222221 01233668999999977776543 334422
Q ss_pred -----------------------CCCCEEEEEEechhHHhheeeeE
Q 010144 451 -----------------------KKGDRILMISLGAGFKCNNCVWE 473 (517)
Q Consensus 451 -----------------------~~Gd~VlliafG~G~t~~a~vlr 473 (517)
.+-++++..+||.|-+.++++++
T Consensus 152 p~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~s~GfGG~na~~vl~ 197 (205)
T d1tqya2 152 PTANLRTSDPECDLDYVPLEARERKLRSVLTVGSGFGGFQSAMVLR 197 (205)
T ss_dssp CBTTCCSBBTTBCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEE
T ss_pred ccCCCCCCCCCCCcccCCCCCcCCCCCEEEEeCCCCCceeEEEEEe
Confidence 12357889999998888888876
|
| >d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=95.50 E-value=0.016 Score=49.59 Aligned_cols=88 Identities=15% Similarity=0.154 Sum_probs=62.0
Q ss_pred HhhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEE---EecCCcchHHHHHHHHHH
Q 010144 158 FSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAF---NLSGMGCSASVVAVDLVQ 234 (517)
Q Consensus 158 ~~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~---dl~~mgCsggl~AL~lA~ 234 (517)
.+.+.....++++++|+++|++++|||.+|... .....-..++++||++++-... +.+++++++...+|+.+.
T Consensus 39 f~~av~~~~~~i~~~L~~~g~~~~dId~~i~Hq----~~~~~~~~~~~~l~l~~~k~~~~~~~~GN~~sasip~~L~~~~ 114 (143)
T d1hnja2 39 FKVAVTELAHIVDETLAANNLDRSQLDWLVPHQ----ANLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEAV 114 (143)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECC----SCHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHHH
T ss_pred hhhhhhhhhHHHHHHHHHhhhcccccceEEecc----CchHHHHHHHHhCccchhhhhhhhhhhcccccchHHHHHHHHH
Confidence 456677788899999999999999999998654 2345567789999998542222 355667777777777655
Q ss_pred HHHHcCCCCEEEEEE
Q 010144 235 QLFRTYKNKLAIVVS 249 (517)
Q Consensus 235 ~lL~ag~~~~aLVVs 249 (517)
+-=+-.+.+++|+++
T Consensus 115 ~~~~~~~Gd~vll~g 129 (143)
T d1hnja2 115 RDGRIKPGQLVLLEA 129 (143)
T ss_dssp HTTCSCTTCEEEEEE
T ss_pred HhCCCCCCCEEEEEE
Confidence 532223456777766
|
| >d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=93.00 E-value=0.09 Score=43.81 Aligned_cols=92 Identities=13% Similarity=0.177 Sum_probs=65.9
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecC--------CcchHHHHHHHHHHHH
Q 010144 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSG--------MGCSASVVAVDLVQQL 236 (517)
Q Consensus 165 a~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~--------mgCsggl~AL~lA~~l 236 (517)
-+.|++++|+++|++.+|||++=++= .+.+.+-..+++||++. ..+|++| .||+|.-..+.++..|
T Consensus 24 Pv~A~~~lL~r~gl~~~Did~~EinE----AFA~q~la~~~~l~id~--~kvN~~GGaiAlGHP~GaSGarl~~tl~~~L 97 (124)
T d1m3ka2 24 PIPASRKALERAGWKIGDLDLVEANE----AFAAQACAVNKDLGWDP--SIVNVNGGAIAIGHPIGASGARILNTLLFEM 97 (124)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECC----SBHHHHHHHHHHHCCCG--GGBSTTCCHHHHCCCTTTHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCChhcccHHHhcc----cchhheeeehHhhCCCh--hhcCCCCCccccccCcCccchhHHHHHHHHH
Confidence 47799999999999999999986652 12233455678888863 3355544 4899999999999998
Q ss_pred HHcCCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEee
Q 010144 237 FRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTN 283 (517)
Q Consensus 237 L~ag~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~ 283 (517)
-+.+ .++. +.+.|.-|..+.|++|++
T Consensus 98 ~~~~-~~~G--------------------las~C~gGG~g~A~liE~ 123 (124)
T d1m3ka2 98 KRRG-ARKG--------------------LATLCIGGGMGVAMCIES 123 (124)
T ss_dssp HHHT-CSEE--------------------EEEEEETTTEEEEEEEEC
T ss_pred HhcC-CCEE--------------------EEEecccccceeEEEEEe
Confidence 7754 2333 334577777788888875
|
| >d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=91.79 E-value=0.051 Score=46.59 Aligned_cols=67 Identities=10% Similarity=0.179 Sum_probs=49.0
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCee--EE----EecCCcchHHHHHHHHHHH
Q 010144 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIK--AF----NLSGMGCSASVVAVDLVQQ 235 (517)
Q Consensus 165 a~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~--~~----dl~~mgCsggl~AL~lA~~ 235 (517)
...+.+++|+++|++++|||.+++.. ..+..-..++++||++++-. ++ +.++|+.++.+.+|+.+.+
T Consensus 45 ~~~~i~~~l~~~g~~~~did~~~~Hq----~~~~i~~~i~~~Lgl~~~k~~~s~~~l~~~GN~~sasi~~~L~~~~~ 117 (148)
T d1u0ma2 45 LAPALKELAGEHGWDASDLDFYIVHA----GGPRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRLFD 117 (148)
T ss_dssp HHHHHHHHHHTTSCCSSCCSCCEEEC----SHHHHHHHHHHHSCSCGGGGHHHHHHHHHTCBCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEECC----CCHHHHHHHHHHhCCChhhhhHHHHHHHhcCCCCcchHHHHHHHHHH
Confidence 46789999999999999999877653 12455677899999986532 22 2377788887777766654
|
| >d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=90.21 E-value=0.26 Score=40.96 Aligned_cols=94 Identities=15% Similarity=0.267 Sum_probs=59.6
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCeeEEEecC--------CcchHHHHHHHHHHHH
Q 010144 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSG--------MGCSASVVAVDLVQQL 236 (517)
Q Consensus 165 a~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~~--------mgCsggl~AL~lA~~l 236 (517)
-+.|++++|+++|++++|||++=.+= .+.+.+-..++++++.-+-..+|++| .||+|.-..+.+++.|
T Consensus 23 P~~A~~~~L~r~gl~~~Did~~EinE----AFAaq~l~~~~~~~l~~d~~kvN~~GGaIAlGHP~GASGari~~tl~~~L 98 (125)
T d1ulqa2 23 PVPATRKALERAGLSFSDLGLIELNE----AFAAQALAVLREWSLSMEDQRLNPNGGAIALGHPLGASGARILTTLVHEM 98 (125)
T ss_dssp HHHHHHHHHHHTTCCGGGCSEEEECC----SBHHHHHHHHHHHTCCTTCTTBSTTCCHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred cHHHHHhHhhccCcCccccchheecc----ccchhHHHHHHHhhccCchhhcCCCCCcccccCCccccchhHHHHHHHHH
Confidence 47799999999999999999886542 01122223344433321222334443 3678888888888888
Q ss_pred HHcCCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEee
Q 010144 237 FRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTN 283 (517)
Q Consensus 237 L~ag~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~ 283 (517)
-+.+ .++. +.+.|.-|-.+.|++|++
T Consensus 99 ~~~~-~~~G--------------------~as~C~gGG~g~A~~iE~ 124 (125)
T d1ulqa2 99 RRRK-VQFG--------------------LATMCIGVGQGIAVVVEG 124 (125)
T ss_dssp HHTT-CSEE--------------------EEEEEETTTEEEEEEEEE
T ss_pred HhcC-CCEE--------------------EEEecccccceeEEEEEe
Confidence 7653 2333 334577788888888875
|
| >d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=89.20 E-value=0.67 Score=38.24 Aligned_cols=86 Identities=16% Similarity=0.139 Sum_probs=53.4
Q ss_pred hhhCCCCCcccccceeecCCCChHHHHHHHhhCCCCcccchh---hhhcccCcccchhhHHHHHHHHHHHcCCCCCCCEE
Q 010144 380 AVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEP---ARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRI 456 (517)
Q Consensus 380 ~~~g~~~d~~~did~~~~Hq~~~~il~~i~~~Lgl~~e~~~~---S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd~V 456 (517)
+++|+++ +|||.|=+|-+-....-...+.|+++++++.+ +....|-+|-+|+- +...|.+.+++ +.|.+.
T Consensus 33 ~r~gl~~---~Did~~EinEAFA~q~la~~~~l~id~~kvN~~GGaiAlGHP~GaSGar-l~~tl~~~L~~---~~~~~G 105 (124)
T d1m3ka2 33 ERAGWKI---GDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGAR-ILNTLLFEMKR---RGARKG 105 (124)
T ss_dssp HHHTCCG---GGCSEEEECCSBHHHHHHHHHHHCCCGGGBSTTCCHHHHCCCTTTHHHH-HHHHHHHHHHH---HTCSEE
T ss_pred HHcCCCh---hcccHHHhcccchhheeeehHhhCCChhhcCCCCCccccccCcCccchh-HHHHHHHHHHh---cCCCEE
Confidence 6889995 99999999998877777889999999999854 12223445555443 34444444432 123333
Q ss_pred E-EEEechhHHhheeeeE
Q 010144 457 L-MISLGAGFKCNNCVWE 473 (517)
Q Consensus 457 l-liafG~G~t~~a~vlr 473 (517)
+ -+..|.|.. .+++++
T Consensus 106 las~C~gGG~g-~A~liE 122 (124)
T d1m3ka2 106 LATLCIGGGMG-VAMCIE 122 (124)
T ss_dssp EEEEEETTTEE-EEEEEE
T ss_pred EEEecccccce-eEEEEE
Confidence 3 344455443 344444
|
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=88.42 E-value=0.14 Score=49.80 Aligned_cols=72 Identities=7% Similarity=0.222 Sum_probs=52.0
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCee--EEEe----cCCcchHHHHHHHH
Q 010144 159 SEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIK--AFNL----SGMGCSASVVAVDL 232 (517)
Q Consensus 159 ~ea~~la~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~~~--~~dl----~~mgCsggl~AL~l 232 (517)
+.+.+...++++++|+++|++++|||.++... ..+..-..++++||++.+-. ++++ +++++++...+|+.
T Consensus 262 ~~~~~~~~~~i~~~L~~~gl~~~did~~i~Hq----~~~~i~~~i~~~Lgl~~ek~~~s~~~l~~~GN~~sasip~~L~~ 337 (372)
T d1teda_ 262 GYIFSGVAPVVTEMLWDNGLQISDIDLWAIHP----GGPKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLET 337 (372)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGCSCEEECC----SCHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHhhhhhccC----ccHHHHHHHHHHcCCCHHHhhhhHHHHhccCCcHHHHHHHHHHH
Confidence 44566788899999999999999999987653 23566677899999985432 2332 66677777777654
Q ss_pred HH
Q 010144 233 VQ 234 (517)
Q Consensus 233 A~ 234 (517)
+.
T Consensus 338 ~l 339 (372)
T d1teda_ 338 MV 339 (372)
T ss_dssp HH
T ss_pred HH
Confidence 43
|
| >d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=87.39 E-value=1 Score=37.02 Aligned_cols=39 Identities=18% Similarity=0.135 Sum_probs=34.6
Q ss_pred hhhCCCCCcccccceeecCCCChHHHHHHHhhCCCCcccchh
Q 010144 380 AVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEP 421 (517)
Q Consensus 380 ~~~g~~~d~~~did~~~~Hq~~~~il~~i~~~Lgl~~e~~~~ 421 (517)
+++|+++ +|||.|=+|-+-....-...+.|+++++++.+
T Consensus 35 ~r~gl~~---~Did~~EinEAFA~q~l~~~~~l~id~~kvN~ 73 (124)
T d1afwa2 35 EATGLQV---QDIDIFEINEAFAAQALYCIHKLGIDLNKVNP 73 (124)
T ss_dssp HHHTCCG---GGCSEEEECCSBHHHHHHHHHHHTCCGGGBST
T ss_pred HHcCCCc---ccCcEEEeccchhHHHHHHHHHcCCChhhccc
Confidence 6889995 99999999999888878889999999999854
|
| >d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=86.42 E-value=0.41 Score=39.61 Aligned_cols=92 Identities=14% Similarity=0.307 Sum_probs=59.1
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCC-------eeEEEecCCcchHHHHHHHHHHHHH
Q 010144 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRND-------IKAFNLSGMGCSASVVAVDLVQQLF 237 (517)
Q Consensus 165 a~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~~~LGl~~~-------~~~~dl~~mgCsggl~AL~lA~~lL 237 (517)
-+.|++++|+++|++.+|||++=.+= .+.+.+-..+++||++.+ +.++.-- .||+|.-..+.++.+|
T Consensus 26 Pv~Ai~klL~r~gl~~~Did~~EinE----AFA~q~l~~~~~l~id~~kvN~~GGaiAlGHP-~GaSGarlv~~l~~~L- 99 (124)
T d1afwa2 26 PAYAIPKVLEATGLQVQDIDIFEINE----AFAAQALYCIHKLGIDLNKVNPRGGAIALGHP-LGCTGARQVATILREL- 99 (124)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECC----SBHHHHHHHHHHHTCCGGGBSTTCCHHHHCBC-TTTHHHHHHHHHHHHS-
T ss_pred hHHHHHHHHHHcCCCcccCcEEEecc----chhHHHHHHHHHcCCChhhccccCccceecCC-cCCchHHHHHHHHHHh-
Confidence 57899999999999999999986652 122334456677777532 2233333 3778887777777765
Q ss_pred HcCCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEeec
Q 010144 238 RTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNN 284 (517)
Q Consensus 238 ~ag~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~~ 284 (517)
+ ..++. +.+.|.=|.-++|++++++
T Consensus 100 ~--~~~~g--------------------las~C~ggG~G~a~~ier~ 124 (124)
T d1afwa2 100 K--KDQIG--------------------VVSMCIGTGMGAAAIFIKE 124 (124)
T ss_dssp C--TTCEE--------------------EEEEEETTTEEEEEEEEEC
T ss_pred c--cCCEE--------------------EEEEcccCCcEEEEEEEeC
Confidence 1 12232 2335665655778888763
|
| >d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=83.34 E-value=0.77 Score=38.10 Aligned_cols=93 Identities=14% Similarity=0.225 Sum_probs=62.4
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHH----------HHcCCCCCeeEEEecCCcchHHHHHHHHHH
Q 010144 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRII----------NRYNLRNDIKAFNLSGMGCSASVVAVDLVQ 234 (517)
Q Consensus 165 a~~Aa~~aL~~agi~p~dID~LI~a~s~~~~~Ps~a~~I~----------~~LGl~~~~~~~dl~~mgCsggl~AL~lA~ 234 (517)
-+.|++++|+++|++.+|||++=.+= .+.+.+-.++ +++...+.+.++.--- ||+|.-..+.+++
T Consensus 25 p~~A~~klL~ragl~~~did~~EinE----AFA~q~l~~~~~~~~~~~~~ekvN~~GGaiAlGHP~-GASGaRlv~~l~~ 99 (128)
T d1wdkc2 25 PVPATQKALKRAGLNMADIDFIELNE----AFAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPF-GCSGARISGTLLN 99 (128)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEECC----SBHHHHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCH-HHHHHHHHHHHHH
T ss_pred cHHHHHHHhhhcCccccccceEEeec----ccchhhhhhhhhcccccCCcceecCCCCcccccccc-cccchhHHHHHHH
Confidence 47799999999999999999886641 0112222223 3444444455555553 8899999999999
Q ss_pred HHHHcCCCCEEEEEEecCCCCCCCCCCCccccccccccccceEEEEEee
Q 010144 235 QLFRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTN 283 (517)
Q Consensus 235 ~lL~ag~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfGDGAAAvLLs~ 283 (517)
.|-+.+ .++. +++.|.-|-.+.|+++++
T Consensus 100 ~L~~~~-~~~G--------------------las~C~gGG~g~A~~iEr 127 (128)
T d1wdkc2 100 VMKQNG-GTFG--------------------LSTMCIGLGQGIATVFER 127 (128)
T ss_dssp HHHHTT-CSEE--------------------EEEEEETTTEEEEEEEEC
T ss_pred HHHhcC-CCEE--------------------EEEecccccceeEEEEEe
Confidence 887654 2333 334677788888888875
|
| >d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=82.81 E-value=1.4 Score=37.53 Aligned_cols=90 Identities=14% Similarity=0.027 Sum_probs=59.0
Q ss_pred hhhCCCCCcccccceeecCCCChHHHHHHH-----hhCCCCcccchhhhhcccCcccchhhHHHHHHHHHHH---cCCC-
Q 010144 380 AVLGAGLNLKAGIEHFCLHPGGRAVIDGTG-----KGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEA---KKRL- 450 (517)
Q Consensus 380 ~~~g~~~d~~~did~~~~Hq~~~~il~~i~-----~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~~~---~g~i- 450 (517)
+++++.| +||+++..|..+...-|.++ +.++=....+. --..=..+||+-+|+-.+.|...+. .|.+
T Consensus 37 ~~a~i~~---~~i~~v~~HgtGT~~~D~~E~~al~~vf~~~~~~~~-v~s~K~~~GH~~~AsG~~~l~~~l~~~~~g~ip 112 (161)
T d1e5ma2 37 KDSGLKP---EMVSYINAHGTSTPANDVTETRAIKQALGNHAYNIA-VSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVP 112 (161)
T ss_dssp HHHTCCG---GGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGGSE-EECTHHHHCBCGGGHHHHHHHHHHHHHHHTEEC
T ss_pred HHcCCCh---hhcceEEEeccCCcccchHHhhhhhhccccCCCcce-EEecccccccccccchhhHHHHhHHhcccCeeC
Confidence 6789996 89999999998877776553 33431111121 0112256899998888888775433 3432
Q ss_pred -----------------------CCCCEEEEEEechhHHhheeeeE
Q 010144 451 -----------------------KKGDRILMISLGAGFKCNNCVWE 473 (517)
Q Consensus 451 -----------------------~~Gd~VlliafG~G~t~~a~vlr 473 (517)
.+-++++.-+||.|-+-.+++++
T Consensus 113 p~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGfGG~Na~lvl~ 158 (161)
T d1e5ma2 113 PTINLENPDPECDLDYVPGQSRALIVDVALSNSFGFGGHNVTLAFK 158 (161)
T ss_dssp CBTTCSSBCTTCCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEE
T ss_pred CccCCCCCCCCCCcccCcCcccCCCCCEEEEeCcCcCcEeEEEEEe
Confidence 12357788999998877777776
|
| >d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=81.49 E-value=3.9 Score=33.44 Aligned_cols=86 Identities=19% Similarity=0.177 Sum_probs=48.8
Q ss_pred hhhCCCCCcccccceeecCCCChHHHHHHHhh--CCCCcccchh---hhhcccCcccchhhHHHHHHHHHHHcCCCCCCC
Q 010144 380 AVLGAGLNLKAGIEHFCLHPGGRAVIDGTGKG--LELDEYDLEP---ARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGD 454 (517)
Q Consensus 380 ~~~g~~~d~~~did~~~~Hq~~~~il~~i~~~--Lgl~~e~~~~---S~~~l~~~GNtsSASi~~~L~~~~~~g~i~~Gd 454 (517)
+++|+++ +|||.|=+|-+-....-...+. ++++++++.+ +....|-+|-+|+- +...|.+.+++. .|.
T Consensus 32 ~r~gl~~---~Did~~EinEAFAaq~l~~~~~~~l~~d~~kvN~~GGaIAlGHP~GASGar-i~~tl~~~L~~~---~~~ 104 (125)
T d1ulqa2 32 ERAGLSF---SDLGLIELNEAFAAQALAVLREWSLSMEDQRLNPNGGAIALGHPLGASGAR-ILTTLVHEMRRR---KVQ 104 (125)
T ss_dssp HHTTCCG---GGCSEEEECCSBHHHHHHHHHHHTCCTTCTTBSTTCCHHHHCCCHHHHHHH-HHHHHHHHHHHT---TCS
T ss_pred hccCcCc---cccchheeccccchhHHHHHHHhhccCchhhcCCCCCcccccCCccccchh-HHHHHHHHHHhc---CCC
Confidence 6889995 9999999998766544444554 7788888853 11122344444333 444455555432 233
Q ss_pred E-EEEEEechhHHhheeeeE
Q 010144 455 R-ILMISLGAGFKCNNCVWE 473 (517)
Q Consensus 455 ~-VlliafG~G~t~~a~vlr 473 (517)
+ +.-+..|.|.. .+++++
T Consensus 105 ~G~as~C~gGG~g-~A~~iE 123 (125)
T d1ulqa2 105 FGLATMCIGVGQG-IAVVVE 123 (125)
T ss_dssp EEEEEEEETTTEE-EEEEEE
T ss_pred EEEEEecccccce-eEEEEE
Confidence 3 33344555543 455554
|
| >d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Probab=80.12 E-value=2.1 Score=36.23 Aligned_cols=88 Identities=7% Similarity=-0.116 Sum_probs=58.1
Q ss_pred hhhCCCCCcccccceeecCCCChHHHHHH-----HhhCCCCcccchhhhhcccCcccchhhHHHHHHHHH---HHcCCC-
Q 010144 380 AVLGAGLNLKAGIEHFCLHPGGRAVIDGT-----GKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYM---EAKKRL- 450 (517)
Q Consensus 380 ~~~g~~~d~~~did~~~~Hq~~~~il~~i-----~~~Lgl~~e~~~~S~~~l~~~GNtsSASi~~~L~~~---~~~g~i- 450 (517)
+++++.| +|||++-.|..+...-|.. .+.+|- ++. -...=..+||+-+|+-...|... ++.|.+
T Consensus 37 ~~a~l~p---~~i~~v~aHgtgT~~~D~~E~~ai~~~fg~---~~~-v~s~Ks~iGH~~~asG~~~l~~~l~~l~~g~iP 109 (158)
T d1ox0a2 37 EEAEISP---EQVAYVNAHGTSTPANEKGESGAIVAVLGK---EVP-VSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVP 109 (158)
T ss_dssp HHHTCCG---GGCCCEECCCCSCHHHHHHHHHHHHHHHCS---SSE-EECTHHHHCBCGGGHHHHHHHHHHHHHHHTEEC
T ss_pred ccccccc---eeeeEEeeeccccccchhHHHHHHHHhcCC---ccc-CcCcccccccchhhhhhhhhcccccccccceec
Confidence 6789996 9999999999887766543 444552 121 02334668999888777766543 334422
Q ss_pred -----------------------CCCCEEEEEEechhHHhheeeeEE
Q 010144 451 -----------------------KKGDRILMISLGAGFKCNNCVWEV 474 (517)
Q Consensus 451 -----------------------~~Gd~VlliafG~G~t~~a~vlr~ 474 (517)
.+-++++.-+||.|-+-+++++|.
T Consensus 110 p~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGfGG~Na~lvl~~ 156 (158)
T d1ox0a2 110 MTAGTSEVSDYIEANVVYGQGLEKEIPYAISNTFGFGGHNAVLAFKR 156 (158)
T ss_dssp CBSSCCSBCTTCCSEECBSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred cccCCCCCCcccCcccccCccccCCCCEEEEeCcCCCcEeEEEEEEe
Confidence 122567888899998777777763
|