Citrus Sinensis ID: 010244

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510----
MQDDCGAASATTTEQYKMKIPHVLTVAGSDSGAGAGIQADLKACAARGVYCSTVITAVTAQNTAGVQGVNIVPEDFVAAQLKSVLSDMQVDVVKTGMLPSTDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASALLGGMQVVTVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVNTRNTHGTGCTLASCIAAELAKGSPMLSAVKVAKCFVETALDYSKDIVIGSGPQGPFDHLLRLKSTSRQSHRAEAFNPSDLFLYAVTDSGMNKKWGRSITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHLGQSDMPARTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIGISNASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVLMDAVQRVK
cccccccccccccccccccccEEEEEEcccccccHHHHHHHHHHHHcccccccHHEEEccccccccccEECccHHHHHHHHHHHHHcccccEEEEcccccHHHHHHHHHHHcccccccEEEccccccccccccccHHHHHHHHHccccccEECcccHHHHHHHHcccccccHHHHHHHHHHHHHccccEEEEcccccccccccCEEEECccCEEEEEcccccccccccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHHHccccEEEcccHHHHHHccccccccccccccHHHHHHHcccccEEEEccccHHHHHHHHHccccEEEEccccccccccccccccHHHHHHHHHcccccEEEEcccccccHHHHHHccccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHHHc
*****************MKIPHVLTVAGSDSGAGAGIQADLKACAARGVYCSTVITAVTAQNTAGVQGVNIVPEDFVAAQLKSVLSDMQVDVVKTGMLPSTDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASALLGGMQVVTVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVNTRNTHGTGCTLASCIAAELAKGSPMLSAVKVAKCFVETALDYSKDIVIGSGPQGPFDHLLRLKSTSRQSHRAEAFNPSDLFLYAVTDSGMNKKWGRSITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHLGQSDMPARTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIGISNASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVLMDA*****
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MQDDCGAASATTTEQYKMKIPHVLTVAGSDSGAGAGIQADLKACAARGVYCSTVITAVTAQNTAGVQGVNIVPEDFVAAQLKSVLSDMQVDVVKTGMLPSTDLVKVLLQSLSEFPVRALVVDPVMVSTSGDVLAGPSTITGLRENLLPMADIVTPNVKEASALLGGMQVVTVADMCSAAKLLHNLGPRTVLVKGGDLPDSSDAVDIFFDGEDFHELRSSRVNTRNTHGTGCTLASCIAAELAKGSPMLSAVKVAKCFVETALDYSKDIVIGSGPQGPFDHLLRLKSTSRQSHRAEAFNPSDLFLYAVTDSGMNKKWGRSITDAVKAALEGGATIIQLREKDADTRGFLEAAKACLQICCVHGVPLLINDRIDIALACDADGVHLGQSDMPARTARALLGPDKIIGVSCKTPEEAHQAWIDGANYIGCGGVYPTNTKANNLTVGLDGLKTVCLASKLPVVAIGGIGISNASDVMKIGVSNLKGVAVVSALFDRECILPESKKLHAVLMDAVQRVK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Thiamine biosynthetic bifunctional enzyme TH1, chloroplastic Essential for thiamine biosynthesis. Bifunctional enzyme that catalyzes the phosphorylation of hydroxymethylpyrimidine phosphate (HMP-P) to HMP-PP and condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP).confidentQ5M731
Thiamine biosynthetic bifunctional enzyme BTH1, chloroplastic Essential for thiamine biosynthesis. Bifunctional enzyme that catalyzes the phosphorylation of hydroxymethylpyrimidine phosphate (HMP-P) to HMP-PP and condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP).probableO48881
Probable thiamine biosynthetic bifunctional enzyme, chloroplastic Essential for thiamine biosynthesis. Bifunctional enzyme that catalyzes the phosphorylation of hydroxymethylpyrimidine phosphate (HMP-P) to HMP-PP and condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP).probableQ2QWK9

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1JXH, chain A
Confidence level:very confident
Coverage over the Query: 18-194,205-283
View the alignment between query and template
View the model in PyMOL
Template: 3NL6, chain A
Confidence level:very confident
Coverage over the Query: 301-508
View the alignment between query and template
View the model in PyMOL
Template: 3RM5, chain A
Confidence level:very confident
Coverage over the Query: 8-301
View the alignment between query and template
View the model in PyMOL