Citrus Sinensis ID: 010247

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510----

MMAVRAVNSCSMFRSAACPPLVSFKIQCCYYHFRSLQLRRNKSNLGFRLPACRSERQFLNRSGSQSCSVHSLVDSVMQELVAIRKRLRVFAKVKVSSGELLEDKLENQVLQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQNGASCSIKPQQVTFVVPGVEKFDHKDISNFLQKAEDNLLNRKDLTHLKVYAIDVDEADELDDALSAMRLQDGRIKVYIHVADPTKYIEPGSLSDKDAMKRGTSVFLPTATYPMFPEKLAMEGMSLRQGEVCNAVTVSVVLHSDGSIAEYSVDNSIIKPTYMLTYESATELLHLNLEEEAELKILSEAAALRLQWRLQQGAIDTATLETRIKVANPEDPEPIINLYVEDQADPAMRLVSEMMILCGEAIATYGSFNNLALPYRGQPQSNIDVSAFAHLPEGPVRSSAIVKIMRAAAIDFRKPVRHGVLGLPGYVQFTSPIRRYMDLLAHYQVGLQAAAWVSVGAQIGDEVEVKVEEAHPRDDIIYLKEVVR

cccccccccccccCCccccccEEEEEEcccccccccccccccccccccccCEEEEEccccccccccCEEEEEEEEcccEEEEEEEEEEEEEEEEEEccccccccccccEEEccccccccccccEEEEEEEEccccCEEEEECccccccccHHHHHHcccccccccccHHHHHHHccccHHHcccccccccccEEEEccccccccccEEEEEEEccccEEEEEEEccccccccccccccHHHHHccccEEcccccccccccccccccccccccccEEEEEEEEEEcccccEEEEEEEEEEEcccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEccccccCEEEcccccccccHHHHHHHHHHHHHcHHHHHHHccccccccccccccccccHHHHcccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHcccHHHHHHHHHHc

********SCSMFRSAACPPLVSFKIQCCYYHFRSLQLRRNKSNLGFRLPACRSER*F**********VHSLVDSVMQELVAIRKRLRVFAKVKVSSGELLEDKLENQVLQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQNGASCSIKPQQVTFVVPGVEKFDHKDISNFLQKAEDNLLNRKDLTHLKVYAIDVDEADELDDALSAMRLQDGRIKVYIHVADPTKYIEPGSLSDKDAMKRGTSVFLPTATYPMFPEKLAMEGMSLRQGEVCNAVTVSVVLHSDGSIAEYSVDNSIIKPTYMLTYESATELLHLNLEEEAELKILSEAAALRLQWRLQQGAIDTATLETRIKVANPEDPEPIINLYVEDQADPAMRLVSEMMILCGEAIATYGSFNNLALPYRGQPQSNIDVSAFAHLPEGPVRSSAIVKIMRAAAIDFRKPVRHGVLGLPGYVQFTSPIRRYMDLLAHYQVGLQAAAWV********************DDIIYLKEVVR

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Ribonuclease II, chloroplastic/mitochondrial	3'-5' exoribonuclease that catalyzes 3' maturation of chloroplast and mitochondrion ribosomal RNAs; degrades short nucleotidic extensions to generate the mature 3'-ends. Involved in the maturation of 23S, 16S and 5S rRNAs.	probable	Q6NQJ6

Prediction of Enzyme Commission Number

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2R7D, chain A
Confidence level:very confident
Coverage over the Query: 183-513
View the alignment between query and template
View the model in PyMOL