Citrus Sinensis ID: 010261

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510----
MWQVLNFSQSTISLFSNMKKSANSATRTHAIQFLIFFFVFINYLCSRTEAAAATSTQELLLGFKATPNPSVSSFQSLLNDTTDTFSLGFLRVNSNQLALAVIHLPSSKPLWLANSTQLAPWSDRIELSFNGSLVISGPHSRVFWSTTRAEGQRVVILNTSNLQIQKLDDPLSVVWQSFDFPTDTLVENQNFTSTMSLVSSNGLYSMRLGSNFIGLYAKFNDKSEQIYWRHRALEAKADIVEGKGPIYVRVNSDGFLGTYQVGNNVPVDVEAFNNFQRNSSGLLTLRLEQDGNLKGHYWDGTNWVLNYQAISDACQLPSPCGSYSLCKQSGCSCLDNRTDYSSSGECFASTSGDFCSEDKSRFRVLRRKGVELPFKELIRYEMTSYLEQCEDLCQNNCSCWGALYNNASGSGFCYMLDYPIQTLLGAGDVSKLGYFKLREDAGKRKLNTGIAAGIGILGGALLILIGVILFGGYKIWTSRRANRILEAEDGVSPGPYKNLGSASFRSIEMCNAPR
cccccccccccEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccEEEccccEEEEEEEcccccEEEEEEEEEccccEEEEcccccccccccEEEEcccccEEEEcccccEEEEcccccccEEEEEccccEEEEEcccccccEEEcccccccccccccccccccccccccccccEEEcccccccEEEccccccEEEEEccccccccccccccccEEEEEccccccEEEEEEccccccEEEEEEEEEcccEEEEEEEcccccEEEEEEccccEEEEEcccccccccccccccccccccccccccccccccccccccEEcccccccccccccEEEEEEccccccccccEEEEccccHHHHHHHHHHccccccEEEcccccccEEEEEEccccccccccccccEEEEEEEccccccccccccEEEEEHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHcccc
ccEEEEccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEccccccccEEEccccEEEccccEEEEEEEcccccEEEEEEEEccccEEEEEEEcccccccccEEEEEccccEEEEcccccEEEEcccccccEEEEcccccEEEEEccccccEEEEEcccccccccccccccccccccccHHEEccccccccccccccccccccccEEEEEcccccccccccccEEEccccccccccEEEEEEEEcccEEEEEEEEEcccEEEEEEEccccEEEEEEEcccccEEEEEccccccccccccccccccccccccccccccccccccccEEcccccccccccccccEEEccccccccccEEEEEccccHHHHHHHHHcccccHHEHHHccccccEEEEEcccHHHHHHHHcccccEEEEEcHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHcccccccHHHHHHccc
MWQVLNFSQSTISLFSNMKKSANSATRTHAIQFLIFFFVFINYLCSRTEAAAATSTQELLLgfkatpnpsvssfqsllndttdtfslgFLRVNSNQLALAVIhlpsskplwlanstqlapwsdrielsfngslvisgphsrvfwsttraegQRVVILntsnlqiqklddplsvvwqsfdfptdtlvenqnfTSTMSLVSsnglysmrlgsnFIGLYAKFNDKSEQIYWRHRALEAKAdivegkgpiyvrvnsdgflgtyqvgnnvpvDVEAFNNFQRNSSGLLTLRleqdgnlkghywdgtNWVLNYQAISdacqlpspcgsyslckqsgcscldnrtdysssgecfastsgdfcsedkSRFRVLRRKGVELPFKELIRYEMTSYLEQCEDLCqnncscwgalynnasgsgfcymldypiqtllgagdvsklgYFKLREDAGKRKLNTGIAAGIGILGGALLILIGVILFGGYKIWTSRranrileaedgvspgpyknlgsasfrsiemcnapr
MWQVLNFSQSTISLFSNMKKSANSATRTHAIQFLIFFFVFINYLCSRTEAAAATSTQELLLGFKATPNPSVSSFQSLLNDTTDTFSLGFLRVNSNQLALAVIHLPSSKPLWLANSTQLAPWSDRIELSFNGSLVISGPHSRVFWSTTRAEGQRVVILNTSNLQIQKLDDPLSVVWQSFDFPTDTLVENQNFTSTMSLVSSNGLYSMRLGSNFIGLYAKFNDKSEQIYWRHRALEAKADIVEGKGPIYVRVNSDGFLGTYQVGNNVPVDVEAFNNFQRNSSGLLTLRLEQDGNLKGHYWDGTNWVLNYQAISDACQLPSPCGSYSLCKQSGCSCLDNRTDYSSSGECfastsgdfcsedksrfrvlrrkgvelpfkELIRYEMTSYLEQCEDLCQNNCSCWGALYNNASGSGFCYMLDYPIQTLLGAGDVSKLGYFKLREDAGKRKLNTGIAAGIGILGGALLILIGVILFGGYKIWTSRRANRIleaedgvspgpyknlgsasfrsiemcnapr
MWQVLNFSQSTISLFSNMKKSANSATRTHAIQFLIFFFVFINYLCSRTEAAAATSTQELLLGFKATPNPSVSSFQSLLNDTTDTFSLGFLRVNSNQLALAVIHLPSSKPLWLANSTQLAPWSDRIELSFNGSLVISGPHSRVFWSTTRAEGQRVVILNTSNLQIQKLDDPLSVVWQSFDFPTDTLVENQNFTSTMSLVSSNGLYSMRLGSNFIGLYAKFNDKSEQIYWRHRALEAKADIVEGKGPIYVRVNSDGFLGTYQVGNNVPVDVEAFNNFQRNSSGLLTLRLEQDGNLKGHYWDGTNWVLNYQAISDACQLPSPCGSYSLCKQSGCSCLDNRTDYSSSGECFASTSGDFCSEDKSRFRVLRRKGVELPFKELIRYEMTSYLEQCEDLCQNNCSCWGALYNNASGSGFCYMLDYPIQTLLGAGDVSKLGYFKLREDAGKRKLNTgiaagigilggalliligvilfggYKIWTSRRANRILEAEDGVSPGPYKNLGSASFRSIEMCNAPR
*************************TRTHAIQFLIFFFVFINYLCSRTEAAAATSTQELLLGFKAT******SFQSLLNDTTDTFSLGFLRVNSNQLALAVIHLPSSKPLWLANSTQLAPWSDRIELSFNGSLVISGPHSRVFWSTTRAEGQRVVILNTSNLQIQKLDDPLSVVWQSFDFPTDTLVENQNFTSTMSLVSSNGLYSMRLGSNFIGLYAKFNDKSEQIYWRHRALEAKADIVEGKGPIYVRVNSDGFLGTYQVGNNVPVDVEAFNNFQRNSSGLLTLRLEQDGNLKGHYWDGTNWVLNYQAISDACQLPSPCGSYSLCKQSGCSCLDNRTDYSSSGECFASTSGDFCSEDKSRFRVLRRKGVELPFKELIRYEMTSYLEQCEDLCQNNCSCWGALYNNASGSGFCYMLDYPIQTLLGAGDVSKLGYFKLREDAGKRKLNTGIAAGIGILGGALLILIGVILFGGYKIWTSRRANRILE****************************
****************************HAIQFLIFFFVFINYLCSRTEAAAATSTQEL******************LNDTTDTFSLGFLRVNSNQLALAVIHLPSSKPLWLANSTQLAPWSDRIELSFNGSLVISGPHSRVFWSTTRAEGQRVVILNTSNLQIQKLDDPLSVVWQSFDFPTDTLVENQNFTSTMSLVSSNGLYSMRLGSNFIGLYAKFNDKSEQIYWRHRALEAKADIVEGKGPIYVRVNSDGFLGTYQVGNNVPVDVEAFNNFQRNSSGLLTLRLEQDGNLKGHYWDGTNWVLNYQAISDACQLPSPCGSYSLCKQSGCSCLDNRTDYSSSGEC***************FRVLRRKGVELPFKELIRYEMTSYLEQCEDLCQNNCSCWGALYNNASGSGFCYMLDYPIQTLLGAGDVSKLGY******************GIGILGGALLILIGVILFGGYKIWT********************NLGSASFRSIEMCNAPR
MWQVLNFSQSTISLFSN********TRTHAIQFLIFFFVFINYLCSRTEAAAATSTQELLLGFKATPNPSVSSFQSLLNDTTDTFSLGFLRVNSNQLALAVIHLPSSKPLWLANSTQLAPWSDRIELSFNGSLVISGPHSRVFWSTTRAEGQRVVILNTSNLQIQKLDDPLSVVWQSFDFPTDTLVENQNFTSTMSLVSSNGLYSMRLGSNFIGLYAKFNDKSEQIYWRHRALEAKADIVEGKGPIYVRVNSDGFLGTYQVGNNVPVDVEAFNNFQRNSSGLLTLRLEQDGNLKGHYWDGTNWVLNYQAISDACQLPSPCGSYSLCKQSGCSCLDNRTDYSSSGECFASTSGDFCSEDKSRFRVLRRKGVELPFKELIRYEMTSYLEQCEDLCQNNCSCWGALYNNASGSGFCYMLDYPIQTLLGAGDVSKLGYFKLREDAGKRKLNTGIAAGIGILGGALLILIGVILFGGYKIWTSRRANRILEAEDGVSPGPYKNLGSASFRSIEMCNAPR
*WQVL*F*************SANSATRTHAIQFLIFFFVFINYLCSRTEAAAATSTQELLLGFKATPNPSVSSFQSLLNDTTDTFSLGFLRVNSNQLALAVIHLPSSKPLWLANSTQLAPWSDRIELSFNGSLVISGPHSRVFWSTTRAEGQRVVILNTSNLQIQKLDDPLSVVWQSFDFPTDTLVENQNFTSTMSLVSSNGLYSMRLGSNFIGLYAKFNDKSEQIYWRHRALEAKADIVEGKGPIYVRVNSDGFLGTYQVGNNVPVDVEAFNNFQRNSSGLLTLRLEQDGNLKGHYWDGTNWVLNYQAISDACQLPSPCGSYSLCKQSGCSCLDNRTDYSSSGECFASTSGDFCSEDKSRFRVLRRKGVELPFKELIRYEMTSYLEQCEDLCQNNCSCWGALYNNASGSGFCYMLDYPIQTLLGAGDVSKLGYFKLREDAGKRKLNTGIAAGIGILGGALLILIGVILFGGYKIWTSRRANR**********GPYKNLGSASFRSIEMCNA**
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MWQVLNFSQSTISLFSNMKKSANSATRTHAIQFLIFFFVFINYLCSRTEAAAATSTQELLLGFKATPNPSVSSFQSLLNDTTDTFSLGFLRVNSNQLALAVIHLPSSKPLWLANSTQLAPWSDRIELSFNGSLVISGPHSRVFWSTTRAEGQRVVILNTSNLQIQKLDDPLSVVWQSFDFPTDTLVENQNFTSTMSLVSSNGLYSMRLGSNFIGLYAKFNDKSEQIYWRHRALEAKADIVEGKGPIYVRVNSDGFLGTYQVGNNVPVDVEAFNNFQRNSSGLLTLRLEQDGNLKGHYWDGTNWVLNYQAISDACQLPSPCGSYSLCKQSGCSCLDNRTDYSSSGECFASTSGDFCSEDKSRFRVLRRKGVELPFKELIRYEMTSYLEQCEDLCQNNCSCWGALYNNASGSGFCYMLDYPIQTLLGAGDVSKLGYFKLREDAGKRKLNTGIAAGIGILGGALLILIGVILFGGYKIWTSRRANRILEAEDGVSPGPYKNLGSASFRSIEMCNAPR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query514 2.2.26 [Sep-21-2011]
Q9LZR8482 PAN domain-containing pro yes no 0.867 0.925 0.546 1e-145
Q8RWZ5 821 G-type lectin S-receptor- no no 0.661 0.414 0.243 1e-19
O65238 872 G-type lectin S-receptor- no no 0.608 0.358 0.261 1e-14
Q9SXB3 820 G-type lectin S-receptor- no no 0.778 0.487 0.244 2e-13
P17801 817 Putative receptor protein N/A no 0.655 0.412 0.256 2e-12
Q9FLV4 872 G-type lectin S-receptor- no no 0.630 0.371 0.240 4e-12
O64780 814 G-type lectin S-receptor- no no 0.752 0.475 0.229 8e-11
Q39203 797 G-type lectin S-receptor- no no 0.488 0.314 0.253 1e-10
Q39688389 Epidermis-specific secret N/A no 0.494 0.652 0.254 2e-10
Q9SY95 802 G-type lectin S-receptor- no no 0.770 0.493 0.240 2e-10
>sp|Q9LZR8|Y5370_ARATH PAN domain-containing protein At5g03700 OS=Arabidopsis thaliana GN=At5g03700 PE=1 SV=1 Back     alignment and function desciption
 Score =  514 bits (1324), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 252/461 (54%), Positives = 337/461 (73%), Gaps = 15/461 (3%)

Query: 52  AATSTQELLLGFKATPNPSVSSFQSLLNDTTDTFSLGFLRVNSNQLALAVIHLPSSKPLW 111
           A     EL+ GF+A P+ S+ SFQ LL D+   FS GFLRVN ++L+LAV H   + PLW
Sbjct: 31  AVEPVLELVKGFEAKPDSSIDSFQPLLTDSNGNFSFGFLRVNGSRLSLAVTHPNLTDPLW 90

Query: 112 LANSTQLAPWSDRIELSFNGSLVISGPHSRVFWSTTRAEGQRVVILNTSNLQIQKLDDPL 171
           + + T+ A WS + +L FNGSLVI  P SR+ WST    G R+++ N SNLQ+ K     
Sbjct: 91  VLDPTRSASWSHKTKLFFNGSLVIIDPSSRLEWST-HTNGDRLILRNDSNLQVVKTST-- 147

Query: 172 SVVWQSFDFPTDTLVENQNFTSTMSLVSSNGLYSMRLGSNFIGLYAKFNDKSEQIYWRHR 231
            V W+SFDFP +TLVE+QNFTS M+LVS NGLYSMRLGS+FIGLYAK +++S+Q YW+H 
Sbjct: 148 FVEWESFDFPGNTLVESQNFTSAMALVSPNGLYSMRLGSDFIGLYAKVSEESQQFYWKHS 207

Query: 232 ALEAKADIVEGKGPIYVRVNSDGFLGTYQVGNNVPVDVEAFNNFQRNSSGLLTLRLEQDG 291
           AL+AKA + +G GPI  R+N +G+LG YQ G ++P+DVEAFN+FQR  +GLL LRLE DG
Sbjct: 208 ALQAKAKVKDGAGPILARINPNGYLGMYQTG-SIPIDVEAFNSFQRPVNGLLILRLESDG 266

Query: 292 NLKGHYWDGTNWVLNYQAISDACQLPSPCGSYSLCKQ-SGCSCLDNRTDYSSSGEC--FA 348
           NL+G+ WDG++W LNY+AI + C LP+PCG YSLC   SGCSC+DNRT     GEC   A
Sbjct: 267 NLRGYLWDGSHWALNYEAIRETCDLPNPCGPYSLCTPGSGCSCIDNRTVI---GECTHAA 323

Query: 349 STSGDFCSEDKSRFRVLRRKGVELPFKELIRYEMTSYLEQCEDLCQNNCSCWGALYNNAS 408
           S+  DFC +  + F+V+RR GVE+PFKEL+ ++ TS L +CE++C +NC C+GA+YNN  
Sbjct: 324 SSPADFC-DKTTEFKVVRRDGVEVPFKELMDHKTTSSLGECEEMCVDNCKCFGAVYNN-- 380

Query: 409 GSGFCYMLDYPIQTLLGAGDVSKLGYFKLREDAGKRKLNTGIAAGIGILGGALLILIGVI 468
           GSGFCY+++YPI+T+LG  D SKLGYFK+RE  GK+K   G+  G+ +L    L+L+  +
Sbjct: 381 GSGFCYLVNYPIRTMLGVADPSKLGYFKVREGVGKKKSRVGLTVGMSLLAVIALVLMVAM 440

Query: 469 LFGGYKIWTSRRANRILEAEDGVSPGPYKNLGSASFRSIEM 509
           ++ G++ W  RR  R+LE ++G+SPGPYKNLGS SF S+EM
Sbjct: 441 VYVGFRNW--RREKRVLEEDNGLSPGPYKNLGSDSFNSVEM 479

Arabidopsis thaliana (taxid: 3702)
>sp|Q8RWZ5|SD25_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS=Arabidopsis thaliana GN=SD25 PE=1 SV=1 Back     alignment and function description
>sp|O65238|Y5537_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 OS=Arabidopsis thaliana GN=At5g35370 PE=2 SV=2 Back     alignment and function description
>sp|Q9SXB3|Y1112_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11280 OS=Arabidopsis thaliana GN=At1g11280 PE=2 SV=1 Back     alignment and function description
>sp|P17801|KPRO_MAIZE Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2 Back     alignment and function description
>sp|Q9FLV4|Y5248_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 OS=Arabidopsis thaliana GN=At5g24080 PE=2 SV=1 Back     alignment and function description
>sp|O64780|Y1614_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g61400 OS=Arabidopsis thaliana GN=At1g61400 PE=2 SV=4 Back     alignment and function description
>sp|Q39203|SD22_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2 OS=Arabidopsis thaliana GN=SD22 PE=1 SV=1 Back     alignment and function description
>sp|Q39688|EP1G_DAUCA Epidermis-specific secreted glycoprotein EP1 OS=Daucus carota GN=EP1 PE=1 SV=1 Back     alignment and function description
>sp|Q9SY95|Y1155_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g61550 OS=Arabidopsis thaliana GN=At1g61550 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query514
147786901490 hypothetical protein VITISV_018205 [Viti 0.910 0.955 0.602 1e-166
225440982485 PREDICTED: PAN domain-containing protein 0.910 0.964 0.602 1e-166
255575377491 ATP binding protein, putative [Ricinus c 0.908 0.951 0.603 1e-160
118486347487 unknown [Populus trichocarpa] 0.922 0.973 0.608 1e-158
224100583487 predicted protein [Populus trichocarpa] 0.922 0.973 0.606 1e-158
15242845482 PAN domain-containing protein [Arabidops 0.867 0.925 0.546 1e-143
449520118 645 PREDICTED: LOW QUALITY PROTEIN: PAN doma 0.871 0.694 0.556 1e-141
449440470 647 PREDICTED: PAN domain-containing protein 0.914 0.726 0.525 1e-137
356570825491 PREDICTED: PAN domain-containing protein 0.906 0.949 0.530 1e-136
356505330497 PREDICTED: PAN domain-containing protein 0.918 0.949 0.528 1e-134
>gi|147786901|emb|CAN62313.1| hypothetical protein VITISV_018205 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  590 bits (1522), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 290/481 (60%), Positives = 363/481 (75%), Gaps = 13/481 (2%)

Query: 36  FFFVFINYLCS----RTEAAAATSTQELLLGFKATPNPSVSSFQSLLNDTTDTFSLGFLR 91
              + I++LC+    + + AAATS QELL GF ATP PS SSFQ LL D T  +S+GFLR
Sbjct: 10  LLLLAISFLCTIKWPQIQTAAATS-QELLKGFTATPEPSTSSFQPLLTDPTGNYSMGFLR 68

Query: 92  VNSNQLALAVIHLPSSKPLWLANSTQLAPWSDRIELSFNGSLVISGPHSRVFWSTTRAEG 151
           VN  QLAL+V+H+PS++PLW A+  +LA WS+     FNGSLVIS P ++VFWST    G
Sbjct: 69  VNRTQLALSVLHVPSAEPLWQADMARLARWSESTHFFFNGSLVISDPRTKVFWSTG-TNG 127

Query: 152 QRVVILNTSNLQIQKLDDPLSVVWQSFDFPTDTLVENQNFTSTMSLVSSNGLYSMRLGSN 211
            R+++LNTSNLQIQKLD   +V+WQSF FPT+TLVENQNFT  MSLVSSNGLYSMRLG +
Sbjct: 128 DRILLLNTSNLQIQKLDKSPTVIWQSFHFPTNTLVENQNFTVNMSLVSSNGLYSMRLGED 187

Query: 212 FIGLYAKFNDKSEQIYWRHRALEAKADIVEGKGPIYVRVNSDGFLGTYQVGNNVPVDVEA 271
           FIGLY  F +  +QIYW+H ALEAKA+IV+G+GPIY+R++S GFLG YQ+G + PVDVEA
Sbjct: 188 FIGLYENFKENPDQIYWKHGALEAKAEIVKGQGPIYIRLDSGGFLGMYQIG-STPVDVEA 246

Query: 272 FNNFQRNSSGLLTLRLEQDGNLKGHYWDGTNWVLNYQAISDACQLPSPCGSYSLCKQ-SG 330
           F +FQ   +G   LRLE DGNLKG+YW G+NWVL+YQAI D C+LP  CGSY LC+  SG
Sbjct: 247 FYSFQHPIAGFRLLRLEPDGNLKGYYWTGSNWVLDYQAIKDQCELPGSCGSYGLCRPGSG 306

Query: 331 CSCLDNRTDYSSSGECFASTSGDFCS--EDKSRFRVLRRKGVELPFKELIRYEMTSYLEQ 388
           CSC+DN T+Y+S  EC    +G+ CS  E +++FRVLRRKG+ELP+KEL+ YE TS LEQ
Sbjct: 307 CSCIDNSTEYNSEKECLPPETGNLCSDIEGENKFRVLRRKGIELPYKELMGYETTSSLEQ 366

Query: 389 CEDLCQNNCSCWGALYNNASGSGFCYMLDYPIQTLLGAGDVSKLGYFKLREDAGKRKLNT 448
           CE  C+NNCSCWG++YNNA  SGFCY +DYPI+TLLG GD +K+GYFK+RE   ++K  +
Sbjct: 367 CERSCENNCSCWGSVYNNA--SGFCYRVDYPIRTLLGVGDDTKVGYFKVREGP-QKKAES 423

Query: 449 GIAAGIGILGGALLILIGVILFGGYKIWTSRRANRILEAEDGVSPGPYKNLGSASFRSIE 508
           G    IG+LG  +L   GV+ FG YK+W  + A  + E   GV+PGPYK LG+ASFRSIE
Sbjct: 424 GFGFVIGLLGATVLAFGGVVGFGVYKVWRRKGAKGVSEEAGGVNPGPYKTLGAASFRSIE 483

Query: 509 M 509
           M
Sbjct: 484 M 484

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225440982|ref|XP_002283448.1| PREDICTED: PAN domain-containing protein At5g03700 [Vitis vinifera] gi|297740069|emb|CBI30251.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255575377|ref|XP_002528591.1| ATP binding protein, putative [Ricinus communis] gi|223531987|gb|EEF33799.1| ATP binding protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|118486347|gb|ABK95014.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224100583|ref|XP_002311933.1| predicted protein [Populus trichocarpa] gi|222851753|gb|EEE89300.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|15242845|ref|NP_195990.1| PAN domain-containing protein [Arabidopsis thaliana] gi|75181333|sp|Q9LZR8.1|Y5370_ARATH RecName: Full=PAN domain-containing protein At5g03700; Flags: Precursor gi|7340655|emb|CAB82935.1| S-receptor kinase-like protein [Arabidopsis thaliana] gi|332003261|gb|AED90644.1| PAN domain-containing protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449520118|ref|XP_004167081.1| PREDICTED: LOW QUALITY PROTEIN: PAN domain-containing protein At5g03700-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449440470|ref|XP_004138007.1| PREDICTED: PAN domain-containing protein At5g03700-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356570825|ref|XP_003553584.1| PREDICTED: PAN domain-containing protein At5g03700-like [Glycine max] Back     alignment and taxonomy information
>gi|356505330|ref|XP_003521444.1| PREDICTED: PAN domain-containing protein At5g03700-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query514
TAIR|locus:2144573482 AT5G03700 [Arabidopsis thalian 0.914 0.975 0.518 7.1e-132
TAIR|locus:2116525 821 SD2-5 "S-domain-2 5" [Arabidop 0.714 0.447 0.256 6e-23
TAIR|locus:4010713447423 AT1G16905 [Arabidopsis thalian 0.645 0.784 0.286 6e-20
TAIR|locus:2037568443 AT1G78860 [Arabidopsis thalian 0.628 0.729 0.271 2.2e-19
TAIR|locus:2182603 872 AT5G35370 [Arabidopsis thalian 0.607 0.357 0.269 2.6e-16
TAIR|locus:2054326 764 AT2G41890 [Arabidopsis thalian 0.692 0.465 0.264 3.5e-15
TAIR|locus:2098237476 AT3G51710 [Arabidopsis thalian 0.519 0.560 0.265 1.7e-14
TAIR|locus:2200923 802 AT1G61550 [Arabidopsis thalian 0.655 0.420 0.253 2.2e-13
TAIR|locus:2197664 804 AT1G61490 [Arabidopsis thalian 0.645 0.412 0.244 7.7e-13
TAIR|locus:2037548455 AT1G78830 [Arabidopsis thalian 0.272 0.307 0.329 7.5e-12
TAIR|locus:2144573 AT5G03700 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1293 (460.2 bits), Expect = 7.1e-132, P = 7.1e-132
 Identities = 254/490 (51%), Positives = 336/490 (68%)

Query:    23 NSATRTHAIQFLIFFFVFINYLCSRTEAAAATSTQELLLGFKATPNPSVSSFQSLLNDTT 82
             NS TR   +  L+F F+  ++   R  A       EL+ GF+A P+ S+ SFQ LL D+ 
Sbjct:     7 NSFTR---VLLLLFVFLVFSHKWQRVNAVEPVL--ELVKGFEAKPDSSIDSFQPLLTDSN 61

Query:    83 DTFSLGFLRVNSNQLALAVIHLPSSKPLWLANSTQLAPWSDRIELSFNGSLVISGPHSRV 142
               FS GFLRVN ++L+LAV H   + PLW+ + T+ A WS + +L FNGSLVI  P SR+
Sbjct:    62 GNFSFGFLRVNGSRLSLAVTHPNLTDPLWVLDPTRSASWSHKTKLFFNGSLVIIDPSSRL 121

Query:   143 FWSTTRAEGQRVVILNTSNLQIQKLDDPLSVVWQSFDFPTDTLVENQNFTSTMSLVSSNG 202
              WST    G R+++ N SNLQ+ K      V W+SFDFP +TLVE+QNFTS M+LVS NG
Sbjct:   122 EWST-HTNGDRLILRNDSNLQVVKTST--FVEWESFDFPGNTLVESQNFTSAMALVSPNG 178

Query:   203 LYSMRLGSNFIGLYAKFNDKSEQIYWRHRALEAKADIVEGKGPIYVRVNSDGFLGTYQVG 262
             LYSMRLGS+FIGLYAK +++S+Q YW+H AL+AKA + +G GPI  R+N +G+LG YQ G
Sbjct:   179 LYSMRLGSDFIGLYAKVSEESQQFYWKHSALQAKAKVKDGAGPILARINPNGYLGMYQTG 238

Query:   263 NNVPVDVEAFNNFQRNSSGLLTLRLEQDGNLKGHYWDGTNWVLNYQAISDACQLPSPCGS 322
             + +P+DVEAFN+FQR  +GLL LRLE DGNL+G+ WDG++W LNY+AI + C LP+PCG 
Sbjct:   239 S-IPIDVEAFNSFQRPVNGLLILRLESDGNLRGYLWDGSHWALNYEAIRETCDLPNPCGP 297

Query:   323 YSLCKQ-SGCSCLDNRTDYSSSGECF--ASTSGDFCSEDKSRFRVLRRKGVELPFKELIR 379
             YSLC   SGCSC+DNRT     GEC   AS+  DFC +  + F+V+RR GVE+PFKEL+ 
Sbjct:   298 YSLCTPGSGCSCIDNRTVI---GECTHAASSPADFCDKT-TEFKVVRRDGVEVPFKELMD 353

Query:   380 YEMTSYLEQCEDLCQNNCSCWGALYNNASGSGFCYMLDYPIQTLLGAGDVSKLGYFKLRE 439
             ++ TS L +CE++C +NC C+GA+YNN  GSGFCY+++YPI+T+LG  D SKLGYFK+RE
Sbjct:   354 HKTTSSLGECEEMCVDNCKCFGAVYNN--GSGFCYLVNYPIRTMLGVADPSKLGYFKVRE 411

Query:   440 DAGKRKLNTXXXXXXXXXXXXXXXXXXXXXXXXYKIWTSRRANRILEAEDGVSPGPYKNL 499
               GK+K                           ++ W  RR  R+LE ++G+SPGPYKNL
Sbjct:   412 GVGKKKSRVGLTVGMSLLAVIALVLMVAMVYVGFRNW--RREKRVLEEDNGLSPGPYKNL 469

Query:   500 GSASFRSIEM 509
             GS SF S+EM
Sbjct:   470 GSDSFNSVEM 479
GO:0005886 "plasma membrane" evidence=ISM;IDA
GO:0030246 "carbohydrate binding" evidence=IEA
GO:0048544 "recognition of pollen" evidence=IEA
GO:0006857 "oligopeptide transport" evidence=RCA
GO:0005768 "endosome" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0005802 "trans-Golgi network" evidence=IDA
TAIR|locus:2116525 SD2-5 "S-domain-2 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:4010713447 AT1G16905 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2037568 AT1G78860 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2182603 AT5G35370 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2054326 AT2G41890 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2098237 AT3G51710 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200923 AT1G61550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2197664 AT1G61490 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2037548 AT1G78830 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LZR8Y5370_ARATHNo assigned EC number0.54660.86770.9253yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00021668001
SubName- Full=Chromosome chr8 scaffold_23, whole genome shotgun sequence; (507 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query514
pfam01453109 pfam01453, B_lectin, D-mannose binding lectin 8e-13
cd00028116 cd00028, B_lectin, Bulb-type mannose-specific lect 9e-07
smart00108114 smart00108, B_lectin, Bulb-type mannose-specific l 2e-06
cd0109884 cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain 3e-06
pfam00954110 pfam00954, S_locus_glycop, S-locus glycoprotein fa 0.002
pfam0827666 pfam08276, PAN_2, PAN-like domain 0.004
>gnl|CDD|216511 pfam01453, B_lectin, D-mannose binding lectin Back     alignment and domain information 
 Score = 64.3 bits (157), Expect = 8e-13
 Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 6/85 (7%)

Query: 111 WLANSTQ-LAPWSDRIELSFNGSLVISGPHSRVFWSTT---RAEGQRVVILNTSNLQIQK 166
           W+AN    L   S  + L  +G+LV+   + RV WS+    +  G   V+ +  NL +  
Sbjct: 6   WVANRLNPLTDSSYTLILQSDGNLVLYDGNGRVVWSSNTSGKGSGCVAVLQDDGNLVL-- 63

Query: 167 LDDPLSVVWQSFDFPTDTLVENQNF 191
            D+   V+WQSFD PTDTL+  Q  
Sbjct: 64  YDNSGKVLWQSFDHPTDTLLPGQKD 88

These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria. Length = 109
>gnl|CDD|237995 cd00028, B_lectin, Bulb-type mannose-specific lectin Back     alignment and domain information
>gnl|CDD|214519 smart00108, B_lectin, Bulb-type mannose-specific lectin Back     alignment and domain information
>gnl|CDD|238531 cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins Back     alignment and domain information
>gnl|CDD|201524 pfam00954, S_locus_glycop, S-locus glycoprotein family Back     alignment and domain information
>gnl|CDD|219774 pfam08276, PAN_2, PAN-like domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 514
PF01453114 B_lectin: D-mannose binding lectin; InterPro: IPR0 99.91
cd00028116 B_lectin Bulb-type mannose-specific lectin. The do 99.9
smart00108114 B_lectin Bulb-type mannose-specific lectin. 99.88
PF00954110 S_locus_glycop: S-locus glycoprotein family; Inter 99.77
PF0827666 PAN_2: PAN-like domain; InterPro: IPR013227 PAN do 99.54
cd0109884 PAN_AP_plant Plant PAN/APPLE-like domain; present 99.44
cd0012980 PAN_APPLE PAN/APPLE-like domain; present in N-term 99.22
smart0047378 PAN_AP divergent subfamily of APPLE domains. Apple 98.45
smart00108114 B_lectin Bulb-type mannose-specific lectin. 98.38
cd00028116 B_lectin Bulb-type mannose-specific lectin. The do 98.01
PF01453114 B_lectin: D-mannose binding lectin; InterPro: IPR0 97.63
cd0110073 APPLE_Factor_XI_like Subfamily of PAN/APPLE-like d 97.62
PF1429551 PAN_4: PAN domain; PDB: 2YIL_E 2YIP_C 2YIO_A. 95.03
PF0002479 PAN_1: PAN domain This Prosite entry concerns appl 94.32
smart0022379 APPLE APPLE domain. Four-fold repeat in plasma kal 93.57
PF0869340 SKG6: Transmembrane alpha-helix domain; InterPro: 89.8
PF04478154 Mid2: Mid2 like cell wall stress sensor; InterPro: 86.8
cd0109980 PAN_AP_HGF Subfamily of PAN/APPLE-like domains; pr 86.01
PF0827771 PAN_3: PAN-like domain; InterPro: IPR006583 PAN do 83.42
PTZ0038296 Variant-specific surface protein (VSP); Provisiona 83.23
PF01102122 Glycophorin_A: Glycophorin A; InterPro: IPR001195 82.96
PF15102146 TMEM154: TMEM154 protein family 81.66
PF0103464 Syndecan: Syndecan domain; InterPro: IPR001050 The 80.73
>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity Back     alignment and domain information 
Probab=99.91  E-value=3.9e-25  Score=192.90  Aligned_cols=87  Identities=30%  Similarity=0.547  Sum_probs=64.0

Q ss_pred             CCceEEeecCCCCCC---CCCcEEEeecCcEEEecCCCceEEee-cCCC----CcEEEeecCCCEEEEecCCCCeeeeee
Q 010261          106 SSKPLWLANSTQLAP---WSDRIELSFNGSLVISGPHSRVFWST-TRAE----GQRVVILNTSNLQIQKLDDPLSVVWQS  177 (514)
Q Consensus       106 ~~tvVWvANR~~Pv~---~~~~l~L~~~G~LvL~d~~g~~vWst-~~s~----~~~a~LldsGNLVL~~~~~~~~~lWQS  177 (514)
                      ++||||+|||++|+.   ...+|.|+.||+|+|.|..++++|++ ++..    +..|+|+|+|||||++. .+ .+||||
T Consensus         1 ~~tvvW~an~~~p~~~~s~~~~L~l~~dGnLvl~~~~~~~iWss~~t~~~~~~~~~~~L~~~GNlvl~d~-~~-~~lW~S   78 (114)
T PF01453_consen    1 PRTVVWVANRNSPLTSSSGNYTLILQSDGNLVLYDSNGSVIWSSNNTSGRGNSGCYLVLQDDGNLVLYDS-SG-NVLWQS   78 (114)
T ss_dssp             ---------TTEEEEECETTEEEEEETTSEEEEEETTTEEEEE--S-TTSS-SSEEEEEETTSEEEEEET-TS-EEEEES
T ss_pred             CcccccccccccccccccccccceECCCCeEEEEcCCCCEEEEecccCCccccCeEEEEeCCCCEEEEee-cc-eEEEee
Confidence            369999999999994   23679999999999999999999999 5442    36899999999999994 65 999999


Q ss_pred             cCCCCCcccCCCcccCC
Q 010261          178 FDFPTDTLVENQNFTST  194 (514)
Q Consensus       178 FD~PTDTLLPgq~L~~~  194 (514)
                      |||||||+||+|+|+.+
T Consensus        79 f~~ptdt~L~~q~l~~~   95 (114)
T PF01453_consen   79 FDYPTDTLLPGQKLGDG   95 (114)
T ss_dssp             TTSSS-EEEEEET--TS
T ss_pred             cCCCccEEEeccCcccC
Confidence            99999999999999853

Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....
>cd00028 B_lectin Bulb-type mannose-specific lectin Back     alignment and domain information
>smart00108 B_lectin Bulb-type mannose-specific lectin Back     alignment and domain information
>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation Back     alignment and domain information
>PF08276 PAN_2: PAN-like domain; InterPro: IPR013227 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions [] Back     alignment and domain information
>cd01098 PAN_AP_plant Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins Back     alignment and domain information
>cd00129 PAN_APPLE PAN/APPLE-like domain; present in N-terminal (N) domains of plasminogen/ hepatocyte growth factor proteins, plasma prekallikrein/coagulation factor XI and microneme antigen proteins, plant receptor-like protein kinases, and various nematode and leech anti-platelet proteins Back     alignment and domain information
>smart00473 PAN_AP divergent subfamily of APPLE domains Back     alignment and domain information
>smart00108 B_lectin Bulb-type mannose-specific lectin Back     alignment and domain information
>cd00028 B_lectin Bulb-type mannose-specific lectin Back     alignment and domain information
>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity Back     alignment and domain information
>cd01100 APPLE_Factor_XI_like Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins Back     alignment and domain information
>PF14295 PAN_4: PAN domain; PDB: 2YIL_E 2YIP_C 2YIO_A Back     alignment and domain information
>PF00024 PAN_1: PAN domain This Prosite entry concerns apple domains, a subset of PAN domains; InterPro: IPR003014 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions [] Back     alignment and domain information
>smart00223 APPLE APPLE domain Back     alignment and domain information
>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ] Back     alignment and domain information
>PF04478 Mid2: Mid2 like cell wall stress sensor; InterPro: IPR007567 This family represents a region near the C terminus of Mid2, which contains a transmembrane region Back     alignment and domain information
>cd01099 PAN_AP_HGF Subfamily of PAN/APPLE-like domains; present in N-terminal (N) domains of plasminogen/hepatocyte growth factor proteins, and various proteins found in Bilateria, such as leech anti-platelet proteins Back     alignment and domain information
>PF08277 PAN_3: PAN-like domain; InterPro: IPR006583 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions [] Back     alignment and domain information
>PTZ00382 Variant-specific surface protein (VSP); Provisional Back     alignment and domain information
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane Back     alignment and domain information
>PF15102 TMEM154: TMEM154 protein family Back     alignment and domain information
>PF01034 Syndecan: Syndecan domain; InterPro: IPR001050 The syndecans are transmembrane proteoglycans which are involved in the organisation of cytoskeleton and/or actin microfilaments, and have important roles as cell surface receptors during cell-cell and/or cell-matrix interactions [, ] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query514
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 44.5 bits (104), Expect = 8e-05
 Identities = 55/384 (14%), Positives = 107/384 (27%), Gaps = 148/384 (38%)

Query: 4   VLNFSQSTIS--LFSNMKKSANSATRTHAIQFLIFFFVFINYLCSRTEAAAATSTQELL- 60
           V +  +S +S     ++  S ++ + T      +F+      L S+ E       +E+L 
Sbjct: 38  VQDMPKSILSKEEIDHIIMSKDAVSGT----LRLFWT-----LLSKQEEMVQKFVEEVLR 88

Query: 61  --LGFKATP------NPS------VSSFQSLLNDTTDTFSLGFL-RVNS-NQLALAVIHL 104
               F  +P       PS      +     L ND    F+   + R+    +L  A++ L
Sbjct: 89  INYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDN-QVFAKYNVSRLQPYLKLRQALLEL 147

Query: 105 PSSKPL-----------WLANSTQLAPWSDRIELSFNGSLVISGPHSRVFW--------- 144
             +K +           W+A    L   S +++   +          ++FW         
Sbjct: 148 RPAKNVLIDGVLGSGKTWVALDVCL---SYKVQCKMDF---------KIFWLNLKNCNSP 195

Query: 145 -----------------STTRAEGQRVVILNT-------SNLQIQK--------LDDPLS 172
                             T+R++    + L           L   K        L +   
Sbjct: 196 ETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN--- 252

Query: 173 V----VWQSFDFPTDTLVENQNFTSTMSLVS-----------SNGLY---SMRLGSNFIG 214
           V     W +F+     L+  +    T  L +           S  L       L   ++ 
Sbjct: 253 VQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLD 312

Query: 215 LYAKFNDKSEQI-----------------------YWRHRALEAKADIVEGK----GPIY 247
              +  D   ++                        W+H   +    I+E       P  
Sbjct: 313 C--RPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAE 370

Query: 248 VRVNSDGF--LGTYQVGNNVPVDV 269
            R     F  L  +    ++P  +
Sbjct: 371 YR---KMFDRLSVFPPSAHIPTIL 391
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query514
3m7h_A276 Putidacin L1; monocot mannose-binding lectin, bact 100.0
1dlp_A236 Lectin scafet precursor; two-domain lectin, beta p 99.97
4h3o_A105 Lectin; cadmium, plant protein; 2.17A {Allium sati 99.78
3a0c_A110 Mannose/sialic acid-binding lectin; beta-prism II, 99.73
1b2p_A119 Protein (lectin); mannose-binding lectin, monocot, 99.73
2dpf_A115 Curculin; sweet taste, taste modifying, plant prot 99.71
1xd5_A112 Gastrodianin-1, antifungal protein GAFP-1; monocot 99.65
3dzw_A109 Agglutinin; lectin, mannobiose, mannose-alpha1, 3- 99.61
3a0c_A110 Mannose/sialic acid-binding lectin; beta-prism II, 99.51
3mez_B113 Mannose-specific lectin 3 chain 2; heterotetramer, 99.49
1xd5_A112 Gastrodianin-1, antifungal protein GAFP-1; monocot 99.47
3r0e_B110 Lectin; carbohydrate binding, carbohydrate, sugar 99.46
1b2p_A119 Protein (lectin); mannose-binding lectin, monocot, 99.45
3r0e_A109 Lectin; carbohydrate binding, carbohydrate, sugar 99.39
2dpf_A115 Curculin; sweet taste, taste modifying, plant prot 99.39
3mez_A111 Mannose-specific lectin 3 chain 1; heterotetramer, 99.2
3mez_B113 Mannose-specific lectin 3 chain 2; heterotetramer, 99.11
3mez_A111 Mannose-specific lectin 3 chain 1; heterotetramer, 99.05
3m7h_A276 Putidacin L1; monocot mannose-binding lectin, bact 99.03
3dzw_A109 Agglutinin; lectin, mannobiose, mannose-alpha1, 3- 98.98
3r0e_B110 Lectin; carbohydrate binding, carbohydrate, sugar 98.94
1dlp_A236 Lectin scafet precursor; two-domain lectin, beta p 98.76
3r0e_A109 Lectin; carbohydrate binding, carbohydrate, sugar 98.71
4h3o_A105 Lectin; cadmium, plant protein; 2.17A {Allium sati 98.68
2ll3_A82 Micronemal protein 4; cell adhesion; NMR {Toxoplas 94.67
4a5v_A161 MIC4, micronemal protein 4; adhesion; NMR {Toxopla 86.42
>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Back     alignment and structure
Probab=100.00  E-value=5.9e-40  Score=327.77  Aligned_cols=218  Identities=17%  Similarity=0.238  Sum_probs=167.9

Q ss_pred             cceeccCccccCCCCCCCCCcEEEeCCCeEEEeeeecCCCCeEEEEEEcCCCceEEeecCCCCCCC-----CCcEEEeec
Q 010261           56 TQELLLGFKATPNPSVSSFQSLLNDTTDTFSLGFLRVNSNQLALAVIHLPSSKPLWLANSTQLAPW-----SDRIELSFN  130 (514)
Q Consensus        56 ~~~l~~g~sls~~~~~~~~~~~LvS~~g~F~lGFf~~~~s~~~i~i~~~~~~tvVWvANR~~Pv~~-----~~~l~L~~~  130 (514)
                      .++|.+|++|+++       ++|+|++|+|+||||.++  .+++ |.  +.+ |||+||||+|+.+     +++|+|+.|
T Consensus        14 ~~~l~~g~~l~~~-------~~l~S~~g~F~lgf~~~~--~~~l-y~--~~~-vvW~Anr~~p~~~~~~~~~~~l~l~~~   80 (276)
T 3m7h_A           14 TSVLPAYQTLSAG-------QYLLSPNQRFKLLLQGDG--NLVI-QD--NGA-TVWVANEQQPFSSTIPLRNKKAPLAFY   80 (276)
T ss_dssp             SSEECTTEEBCTT-------CEEECTTSSEEEEECTTS--CEEE-EE--TTE-EEEECSTTSTTEEEEECCCTTCCSEEE
T ss_pred             CCEecCCCEecCC-------CEEEcCCCcEEEEEECCC--CeEE-EC--CCC-eEEECCCCCCcCCcccccceEEEEeCC
Confidence            6899999999863       689999999999999433  4444 33  777 9999999999975     678999999


Q ss_pred             CcEEE--ecCCCceEEeecCCC--------CcEEEeecCCCEEEEecCCCCeeeeeecCCCCCcccCCCc----ccCCce
Q 010261          131 GSLVI--SGPHSRVFWSTTRAE--------GQRVVILNTSNLQIQKLDDPLSVVWQSFDFPTDTLVENQN----FTSTMS  196 (514)
Q Consensus       131 G~LvL--~d~~g~~vWst~~s~--------~~~a~LldsGNLVL~~~~~~~~~lWQSFD~PTDTLLPgq~----L~~~~~  196 (514)
                      |+|+|  .|++|.+||+|+++.        +..|+|+|+|||||++   + .+||||  ||||||||||+    |..+++
T Consensus        81 G~Lvl~~~~~~~~~vWst~~~~~~~~~~~~~~~a~L~d~GNlVl~~---~-~~lWqS--~ptdtlLpg~~~~~~l~~g~~  154 (276)
T 3m7h_A           81 VQYGAFLDDYSRRRVWLTDNSTFTSNDQWNRTHLVLQDDGNIVLVD---S-LALWNG--TPAIPLVPGAIDSLLLAPGSE  154 (276)
T ss_dssp             ESSSEEEEEGGGTEEEEECCCCCCCTTHHHHEEEEECTTSCEEEEE---E-EEEEES--CTTSCCCCSCTTCEEECSSEE
T ss_pred             CcEEEEEeCCCCCEEEEeCCCcccccccCCceEEEEeCCCCEEecC---C-ceeeCc--ccccccccccccccccccCcc
Confidence            99999  888899999999753        2589999999999997   3 899999  99999999999    778888


Q ss_pred             EEe----ecceeEEEecCC-ceeeEEEecCCccceEEEecccCCceeeeeccccEEEEECCCcceEEEeeCCCcceeeEE
Q 010261          197 LVS----SNGLYSMRLGSN-FIGLYAKFNDKSEQIYWRHRALEAKADIVEGKGPIYVRVNSDGFLGTYQVGNNVPVDVEA  271 (514)
Q Consensus       197 L~S----s~G~y~l~~~~~-~~~l~~~~~~~~~~~YW~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  271 (514)
                      |.|    ++|.|+++++++ ++.++.   .+ ..+||++++++.        ++..+.++..|.+.++...+     ...
T Consensus       155 L~S~~dps~G~fsl~l~~dGnlvLy~---~~-~~~yW~Sgt~~~--------~~~~l~l~~dGnLvl~d~~~-----~~v  217 (276)
T 3m7h_A          155 LVQGVVYGAGASKLVFQGDGNLVAYG---PN-GAATWNAGTQGK--------GAVRAVFQGDGNLVVYGAGN-----AVL  217 (276)
T ss_dssp             ECTTCEEEETTEEEEECTTSCEEEEC---TT-SSEEEECCCTTT--------TCCEEEECTTSCEEEECTTS-----CEE
T ss_pred             cccCCCCCCceEEEeecCCceEEEEe---CC-CeEEEECCCCCC--------ccEEEEEcCCCeEEEEeCCC-----cEE
Confidence            875    589999999988 666641   22 579999987652        12355677778655554321     123


Q ss_pred             EEEeeeCCCcEEEEEEeeCCceEEEEeeCCceEEEeeecc
Q 010261          272 FNNFQRNSSGLLTLRLEQDGNLKGHYWDGTNWVLNYQAIS  311 (514)
Q Consensus       272 ~~~~~~~~~~~~rl~Ld~dG~lr~y~w~~~~W~~~~~~p~  311 (514)
                      ..++... ...+|++|+.||+|++|.| ...|..++.+|.
T Consensus       218 WsS~t~~-~~~~rl~Ld~dGnLvly~~-~~~Wqsf~~~P~  255 (276)
T 3m7h_A          218 WHSHTGG-HASAVLRLQANGSIAILDE-KPVWARFGFQPT  255 (276)
T ss_dssp             EECSCTT-CTTCEEEECTTSCEEEEEE-EEEEESSSCCTT
T ss_pred             EEecCCC-CCCEEEEEcCCccEEEEcC-CCeEEccCccCC
Confidence            3332222 2348999999999999998 345666555553
>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Back     alignment and structure
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Back     alignment and structure
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Back     alignment and structure
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Back     alignment and structure
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Back     alignment and structure
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Back     alignment and structure
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Back     alignment and structure
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Back     alignment and structure
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 Back     alignment and structure
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Back     alignment and structure
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Back     alignment and structure
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Back     alignment and structure
>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Back     alignment and structure
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Back     alignment and structure
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 Back     alignment and structure
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 Back     alignment and structure
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 Back     alignment and structure
>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Back     alignment and structure
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Back     alignment and structure
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Back     alignment and structure
>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Back     alignment and structure
>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Back     alignment and structure
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Back     alignment and structure
>2ll3_A Micronemal protein 4; cell adhesion; NMR {Toxoplasma gondii} PDB: 2ll4_M* Back     alignment and structure
>4a5v_A MIC4, micronemal protein 4; adhesion; NMR {Toxoplasma gondii} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 514
d1kj1a_109 b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium 7e-06
>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Length = 109 Back     information, alignment and structure

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

 Score = 42.6 bits (100), Expect = 7e-06
 Identities = 21/118 (17%), Positives = 40/118 (33%), Gaps = 17/118 (14%)

Query: 66  TPNPSVSSFQSLLNDTTDTFSLGFLRVNSNQLALAVIHLPSSKPLWLANSTQLAPWSDRI 125
           T    + + QSL     + +           L L       S  +W +N+  L     + 
Sbjct: 5   TNGEGLYAGQSL---DVEPYHFIM--QEDCNLVLY----DHSTSVWASNTGILGKKGCKA 55

Query: 126 ELSFNGSLVISGPHSRVFWSTTRAEGQ---RVVILNTSNLQIQKLDDPLSVVWQSFDF 180
            L  +G+ V+     R  W++    G     +V+    N+ I       S +W +  +
Sbjct: 56  VLQSDGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVIYG-----SDIWSTGTY 108

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query514
d1kj1a_109 Lectin (agglutinin) {Garlic (Allium sativum) [TaxI 99.74
d1xd5a_112 Gastrodianin (antifungal protein) {Gastrodia elata 99.74
d1jpca_108 Lectin (agglutinin) {Snowdrop (Galanthus nivalis) 99.71
d1dlpa2120 Fetuin-binding protein Scafet precursor {Bluebell 99.56
d1b2pa_119 Lectin (agglutinin) {Bluebell (Scilla campanulata) 99.43
d1dlpa1115 Fetuin-binding protein Scafet precursor {Bluebell 99.42
d1dlpa1115 Fetuin-binding protein Scafet precursor {Bluebell 99.07
d1xd5a_112 Gastrodianin (antifungal protein) {Gastrodia elata 98.91
d1dlpa2120 Fetuin-binding protein Scafet precursor {Bluebell 98.9
d1b2pa_119 Lectin (agglutinin) {Bluebell (Scilla campanulata) 98.84
d1kj1a_109 Lectin (agglutinin) {Garlic (Allium sativum) [TaxI 98.72
d1jpca_108 Lectin (agglutinin) {Snowdrop (Galanthus nivalis) 98.71
d2qj2a191 Hepatocyte growth factor {Human (Homo sapiens) [Ta 85.55
d1emoa239 Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} 80.02
>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Back     information, alignment and structure
class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=99.74  E-value=6.7e-18  Score=142.91  Aligned_cols=104  Identities=19%  Similarity=0.336  Sum_probs=83.8

Q ss_pred             ceeccCccccCCCCCCCCCcEEEeCCCeEEEeeeecCCCCeEEEEEEcCCCceEEeecCCCCCCCCCcEEEeecCcEEEe
Q 010261           57 QELLLGFKATPNPSVSSFQSLLNDTTDTFSLGFLRVNSNQLALAVIHLPSSKPLWLANSTQLAPWSDRIELSFNGSLVIS  136 (514)
Q Consensus        57 ~~l~~g~sls~~~~~~~~~~~LvS~~g~F~lGFf~~~~s~~~i~i~~~~~~tvVWvANR~~Pv~~~~~l~L~~~G~LvL~  136 (514)
                      +.|.+|+.|.+.       +.|.  +|.|.|+|...++  +.+  +.  ..++||+||++.|+.....+.|+.||+|+|.
T Consensus         2 ~~L~~g~~L~~g-------~~l~--~g~~~l~~q~dgn--Lvl--~~--~~~~vW~ant~~~~~~~~~l~l~~dGnLvl~   66 (109)
T d1kj1a_           2 NLLTNGEGLYAG-------QSLD--VEPYHFIMQEDCN--LVL--YD--HSTSVWASNTGILGKKGCKAVLQSDGNFVVY   66 (109)
T ss_dssp             CEEETTCEEETT-------CEEE--ETTEEEEECTTSC--EEE--EE--TTEEEEECCCCCTTCCCCEEEECTTSCEEEE
T ss_pred             CCccCCCEEeCC-------CEEE--eCCEEEEecCCCe--EEE--Ee--CCEEEEEeCCCCCCceeEEEEEcCCceEEEE
Confidence            567788877764       4565  4889999976554  332  22  4588999999999987778999999999999


Q ss_pred             cCCCceEEeecCCC--C-cEEEeecCCCEEEEecCCCCeeeeeecCC
Q 010261          137 GPHSRVFWSTTRAE--G-QRVVILNTSNLQIQKLDDPLSVVWQSFDF  180 (514)
Q Consensus       137 d~~g~~vWst~~s~--~-~~a~LldsGNLVL~~~~~~~~~lWQSFD~  180 (514)
                      |++|.+||+|+++.  + .+|+|+|+|||||++     ..+|||+-|
T Consensus        67 ~~~g~~vW~s~t~~~~~~~~l~L~ddGNlvly~-----~~~W~S~t~  108 (109)
T d1kj1a_          67 DAEGRSLWASHSVRGNGNYVLVLQEDGNVVIYG-----SDIWSTGTY  108 (109)
T ss_dssp             CSSSCEEEECCCCCCSSCCEEEECTTSCEEEEC-----CEEEECCCC
T ss_pred             eCCCcEEEEEeeECCCCCEEEEEeCCCcEEEEC-----CCEecCCCc
Confidence            99999999998764  2 579999999999996     359999865
>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Back     information, alignment and structure
>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Back     information, alignment and structure
>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Back     information, alignment and structure
>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Back     information, alignment and structure
>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Back     information, alignment and structure
>d2qj2a1 g.10.1.1 (A:36-126) Hepatocyte growth factor {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure