Citrus Sinensis ID: 010375
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 512 | 2.2.26 [Sep-21-2011] | |||||||
| O04249 | 513 | Sugar transport protein 7 | yes | no | 0.982 | 0.980 | 0.819 | 0.0 | |
| Q10710 | 522 | Sugar carrier protein A O | N/A | no | 0.994 | 0.975 | 0.844 | 0.0 | |
| Q94AZ2 | 526 | Sugar transport protein 1 | no | no | 0.958 | 0.933 | 0.603 | 1e-180 | |
| Q8GW61 | 504 | Sugar transport protein 1 | no | no | 0.980 | 0.996 | 0.598 | 1e-179 | |
| Q07423 | 510 | Hexose carrier protein HE | N/A | no | 0.960 | 0.964 | 0.577 | 1e-167 | |
| Q9LT15 | 514 | Sugar transport protein 1 | no | no | 0.931 | 0.928 | 0.562 | 1e-163 | |
| Q9SX48 | 517 | Sugar transport protein 9 | no | no | 0.931 | 0.922 | 0.569 | 1e-162 | |
| P23586 | 522 | Sugar transport protein 1 | no | no | 0.972 | 0.954 | 0.574 | 1e-162 | |
| Q41144 | 523 | Sugar carrier protein C O | N/A | no | 0.970 | 0.950 | 0.566 | 1e-161 | |
| Q39228 | 514 | Sugar transport protein 4 | no | no | 0.943 | 0.939 | 0.561 | 1e-158 |
| >sp|O04249|STP7_ARATH Sugar transport protein 7 OS=Arabidopsis thaliana GN=STP7 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/505 (81%), Positives = 460/505 (91%), Gaps = 2/505 (0%)
Query: 1 MAGGSLGPAGVAKERAEQYQGKVTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKK 60
MAGGS GP GVAKERAEQYQGKVT VI+AC VAAIGGSIFGYDIGISGGVTSMD FL++
Sbjct: 1 MAGGSFGPTGVAKERAEQYQGKVTSYVIIACLVAAIGGSIFGYDIGISGGVTSMDEFLEE 60
Query: 61 FFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGG 120
FFH VY KKK AHE+NYCKYDNQGLAAFTSSLYLAGLV++ VASP+TR+YGRRASI+CGG
Sbjct: 61 FFHTVYEKKKQAHESNYCKYDNQGLAAFTSSLYLAGLVSTLVASPITRNYGRRASIVCGG 120
Query: 121 ISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLA 180
ISFL+G+ LNA A NLAMLL GRI+LGVGIGFGNQAVPLYLSE+APTHLRGGLNMMFQLA
Sbjct: 121 ISFLIGSGLNAGAVNLAMLLAGRIMLGVGIGFGNQAVPLYLSEVAPTHLRGGLNMMFQLA 180
Query: 181 TTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEG 240
TT+GIFTANM+NYGTQ+L+ WGWRLSLGLAA PAL+MT+GG LPETPNSL+ERG G
Sbjct: 181 TTIGIFTANMVNYGTQQLKPWGWRLSLGLAAFPALLMTLGGYFLPETPNSLVERGLTERG 240
Query: 241 RRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTG 300
RRVL K+RGT+ VNAE QDMVDASELANSIKHPFRNIL++R+RPQLVMAI MPMFQILTG
Sbjct: 241 RRVLVKLRGTENVNAELQDMVDASELANSIKHPFRNILQKRHRPQLVMAICMPMFQILTG 300
Query: 301 INSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQM 360
INSILFYAPVLFQ+MGF G+ASLYSSA+TGAVL ST ISI VD+LGRRALLI+GGIQM
Sbjct: 301 INSILFYAPVLFQTMGFGGNASLYSSALTGAVLVLSTFISIGLVDRLGRRALLITGGIQM 360
Query: 361 ITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLET 420
I CQVIV++ILG+KFG NQELSK +S++VV+ ICLFV+AFGWSWGPLGWT+PSEIFPLET
Sbjct: 361 IICQVIVAVILGVKFGDNQELSKGYSVIVVIFICLFVVAFGWSWGPLGWTIPSEIFPLET 420
Query: 421 RSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLPETKGVP 480
RSAGQSITVAVNL FTF+IAQ FL LLC+FKFGIFLFFAGWVT+MTIFVYF LPETKGVP
Sbjct: 421 RSAGQSITVAVNLLFTFIIAQAFLGLLCAFKFGIFLFFAGWVTVMTIFVYFLLPETKGVP 480
Query: 481 IEEMILLWRKHWFWKRIMPVVEETN 505
IEEM LLW KHWFWK+++P + TN
Sbjct: 481 IEEMTLLWSKHWFWKKVLP--DATN 503
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Mediates an active uptake of hexoses, probably by sugar/hydrogen symport. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q10710|STA_RICCO Sugar carrier protein A OS=Ricinus communis GN=STA PE=2 SV=1 | Back alignment and function description |
|---|
Score = 862 bits (2228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/509 (84%), Positives = 467/509 (91%)
Query: 1 MAGGSLGPAGVAKERAEQYQGKVTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKK 60
MAGGSL PAGVAKERAEQYQGKVT +V VAC VAA+GGSIFGYDIGISGGV SMDAFL+K
Sbjct: 1 MAGGSLAPAGVAKERAEQYQGKVTFAVFVACMVAAVGGSIFGYDIGISGGVISMDAFLEK 60
Query: 61 FFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGG 120
FF VYLKKKHAHENNYCKYD+Q LAAFTSSLYLAGL AS VA P+TR YGRRASII GG
Sbjct: 61 FFRSVYLKKKHAHENNYCKYDDQRLAAFTSSLYLAGLAASLVAGPITRIYGRRASIISGG 120
Query: 121 ISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLA 180
ISFL+GAALNA A NLAMLL GRI+LGVGIGFGNQAVPLYLSEMAPTHLRGGLN+MFQLA
Sbjct: 121 ISFLIGAALNATAINLAMLLLGRIMLGVGIGFGNQAVPLYLSEMAPTHLRGGLNIMFQLA 180
Query: 181 TTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEG 240
TT GIFTANM+NYGT KLE+WGWRLSLGLAAAPAL+MT+GG+LLPETPNSLIE+G +G
Sbjct: 181 TTSGIFTANMVNYGTHKLESWGWRLSLGLAAAPALLMTIGGLLLPETPNSLIEQGLHEKG 240
Query: 241 RRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTG 300
R VLEKIRGTK V+AE+QDM+DASELANSIKHPFRNILE+RNRPQLVMAIFMP FQILTG
Sbjct: 241 RNVLEKIRGTKHVDAEFQDMLDASELANSIKHPFRNILEKRNRPQLVMAIFMPTFQILTG 300
Query: 301 INSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQM 360
IN ILFYAP LFQSMGF G+A+LYSSA+TGAVL SST ISIATVD+LGRR LLISGGIQM
Sbjct: 301 INIILFYAPPLFQSMGFGGNAALYSSAVTGAVLCSSTFISIATVDRLGRRFLLISGGIQM 360
Query: 361 ITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLET 420
ITCQVIV+IILG+KFG NQ+LSKSFS+LVV++ICLFVLAFGWSWGPLGWTVPSEIFPLET
Sbjct: 361 ITCQVIVAIILGVKFGDNQQLSKSFSVLVVIMICLFVLAFGWSWGPLGWTVPSEIFPLET 420
Query: 421 RSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLPETKGVP 480
RSAGQSITVAVNLFFTFVIAQ F +LLC+FKFGIFLFFAGWVT+MT FVY FLPETKGVP
Sbjct: 421 RSAGQSITVAVNLFFTFVIAQSFPSLLCAFKFGIFLFFAGWVTVMTAFVYIFLPETKGVP 480
Query: 481 IEEMILLWRKHWFWKRIMPVVEETNNQQS 509
IEEMI LWRKHWFWK+I+P E ++ +
Sbjct: 481 IEEMIFLWRKHWFWKKIVPGQPEVDDSRE 509
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Ricinus communis (taxid: 3988) |
| >sp|Q94AZ2|STP13_ARATH Sugar transport protein 13 OS=Arabidopsis thaliana GN=STP13 PE=1 SV=2 | Back alignment and function description |
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Score = 632 bits (1631), Expect = e-180, Method: Compositional matrix adjust.
Identities = 301/499 (60%), Positives = 390/499 (78%), Gaps = 8/499 (1%)
Query: 18 QYQGKVTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLK--KKHAHEN 75
+++ K+TP VI++C +AA GG +FGYD+G+SGGVTSM FL+KFF VY K ++
Sbjct: 14 EFEAKITPIVIISCIMAATGGLMFGYDVGVSGGVTSMPDFLEKFFPVVYRKVVAGADKDS 73
Query: 76 NYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAAN 135
NYCKYDNQGL FTSSLYLAGL A+F AS TR GRR +++ G+ F++G ALNA A +
Sbjct: 74 NYCKYDNQGLQLFTSSLYLAGLTATFFASYTTRTLGRRLTMLIAGVFFIIGVALNAGAQD 133
Query: 136 LAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGT 195
LAML+ GRILLG G+GF NQAVPL+LSE+APT +RGGLN++FQL T+GI AN++NYGT
Sbjct: 134 LAMLIAGRILLGCGVGFANQAVPLFLSEIAPTRIRGGLNILFQLNVTIGILFANLVNYGT 193
Query: 196 QKLET-WGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVN 254
K++ WGWRLSLGLA PAL++TVG +L+ ETPNSL+ERG+ EG+ VL +IRGT V
Sbjct: 194 AKIKGGWGWRLSLGLAGIPALLLTVGALLVTETPNSLVERGRLDEGKAVLRRIRGTDNVE 253
Query: 255 AEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS 314
E+ D+++AS LA +KHPFRN+L+RRNRPQLV+A+ + +FQ TGIN+I+FYAPVLF +
Sbjct: 254 PEFADLLEASRLAKEVKHPFRNLLQRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFST 313
Query: 315 MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLK 374
+GF DASLYS+ +TGAV STL+SI +VDK+GRR LL+ G+QM QV+++IILG+K
Sbjct: 314 LGFGSDASLYSAVVTGAVNVLSTLVSIYSVDKVGRRVLLLEAGVQMFFSQVVIAIILGVK 373
Query: 375 F-GPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNL 433
+ LSK F+ILVVV+IC +V AF WSWGPLGW +PSE FPLETRSAGQS+TV VNL
Sbjct: 374 VTDTSTNLSKGFAILVVVMICTYVAAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNL 433
Query: 434 FFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLPETKGVPIEEMI-LLWRKHW 492
FTF+IAQ FL++LC FKFGIF+FF+ WV IM++FV F LPETK +PIEEM +W+KHW
Sbjct: 434 LFTFIIAQAFLSMLCHFKFGIFIFFSAWVLIMSVFVMFLLPETKNIPIEEMTERVWKKHW 493
Query: 493 FWKRIMPVVEETNNQQSIS 511
FW R M ++ N+ + ++
Sbjct: 494 FWARFM---DDHNDHEFVN 509
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Mediates an active uptake of hexoses, probably by sugar/hydrogen symport. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q8GW61|STP14_ARATH Sugar transport protein 14 OS=Arabidopsis thaliana GN=STP14 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 627 bits (1616), Expect = e-179, Method: Compositional matrix adjust.
Identities = 302/505 (59%), Positives = 386/505 (76%), Gaps = 3/505 (0%)
Query: 1 MAGGSLGPAGVAKERAEQYQGKVTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKK 60
MAGG+L G K RA Y+ ++T I AC V ++GGS+FGYD+G+SGGVTSMD FLK+
Sbjct: 1 MAGGALTDEGGLK-RAHLYEHRITSYFIFACIVGSMGGSLFGYDLGVSGGVTSMDDFLKE 59
Query: 61 FFHDVYLKKK-HAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICG 119
FF +Y +K+ H +E +YCKYDNQ L FTSSLY AGL+++F AS VTR YGRR SI+ G
Sbjct: 60 FFPGIYKRKQMHLNETDYCKYDNQILTLFTSSLYFAGLISTFGASYVTRIYGRRGSILVG 119
Query: 120 GISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQL 179
+SF LG +NAAA N+ ML+ GRI LG+GIGFGNQAVPLYLSEMAP +RG +N +FQL
Sbjct: 120 SVSFFLGGVINAAAKNILMLILGRIFLGIGIGFGNQAVPLYLSEMAPAKIRGTVNQLFQL 179
Query: 180 ATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVE 239
T +GI AN+INY T+++ WGWRLSLGLA PA++M +GG++LPETPNSL+E+GK +
Sbjct: 180 TTCIGILVANLINYKTEQIHPWGWRLSLGLATVPAILMFLGGLVLPETPNSLVEQGKLEK 239
Query: 240 GRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVM-AIFMPMFQIL 298
+ VL K+RGT + AE+QD+V+AS+ A ++K+PFRN+L RRNRPQLV+ AI +P FQ L
Sbjct: 240 AKAVLIKVRGTNNIEAEFQDLVEASDAARAVKNPFRNLLARRNRPQLVIGAIGLPAFQQL 299
Query: 299 TGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGI 358
TG+NSILFYAPV+FQS+GF G ASL SS +T A L + ++S+ + DK GRR LL+ +
Sbjct: 300 TGMNSILFYAPVMFQSLGFGGSASLISSTITNAALVVAAIMSMYSADKFGRRFLLLEASV 359
Query: 359 QMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPL 418
+M V+V + L LKFG +EL KS +++VV+ICLFVLA+G SWGP+GW VPSE+FPL
Sbjct: 360 EMFCYMVVVGVTLALKFGEGKELPKSLGLILVVLICLFVLAYGRSWGPMGWLVPSELFPL 419
Query: 419 ETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLPETKG 478
ETRSAGQS+ V VNLFFT +IAQ FL LC K+GIFL FAG + M FVYF LPETK
Sbjct: 420 ETRSAGQSVVVCVNLFFTALIAQCFLVSLCHLKYGIFLLFAGLILGMGSFVYFLLPETKQ 479
Query: 479 VPIEEMILLWRKHWFWKRIMPVVEE 503
VPIEE+ LLWR+HW WK+ + V+E
Sbjct: 480 VPIEEVYLLWRQHWLWKKYVEDVDE 504
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Mediates an active uptake of hexoses, probably by sugar/hydrogen symport. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q07423|HEX6_RICCO Hexose carrier protein HEX6 OS=Ricinus communis GN=HEX6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 587 bits (1513), Expect = e-167, Method: Compositional matrix adjust.
Identities = 287/497 (57%), Positives = 374/497 (75%), Gaps = 5/497 (1%)
Query: 18 QYQGKVTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHE-NN 76
QY G++T V ++C +AA+GG IFGYDIG+SGGVTSMD FLKKFF DVY K K E +N
Sbjct: 13 QYNGRMTSFVALSCMMAAMGGVIFGYDIGVSGGVTSMDPFLKKFFPDVYRKMKEDTEISN 72
Query: 77 YCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANL 136
YCK+D+Q L +FTSSLY+AGLVASF AS VTR +GR+ SI+ GG FL AAL AA N+
Sbjct: 73 YCKFDSQLLTSFTSSLYVAGLVASFFASSVTRAFGRKPSILLGGXVFLAXAALGGAAVNV 132
Query: 137 AMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQ 196
ML+ GR+LLGVG+GF NQAVPLYLSEMAP RG +N FQ + +G +AN+INYGT+
Sbjct: 133 YMLIFGRVLLGVGVGFANQAVPLYLSEMAPPRYRGAINNGFQFSVGIGALSANLINYGTE 192
Query: 197 KLET-WGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVE-GRRVLEKIRGTKEVN 254
K+E WGWR+SL +AA PA ++T G + LPETPNSLI+R E + +L+++RGT +V
Sbjct: 193 KIEGGWGWRISLAMAAVPAAILTFGALFLPETPNSLIQRSNDHERAKLMLQRVRGTTDVQ 252
Query: 255 AEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS 314
AE D++ AS ++ +I+HPF+NI+ R+ RPQLVMA+ +P FQ +TGIN I FYAP+LF++
Sbjct: 253 AELDDLIKASIISRTIQHPFKNIMRRKYRPQLVMAVAIPFFQQVTGINVIAFYAPILFRT 312
Query: 315 MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLK 374
+G + ASL SS +TG V ++ST IS+ VDKLGRRAL I GG+QM Q++V I+ +
Sbjct: 313 IGLEESASLLSSIVTGLVGSASTFISMLIVDKLGRRALFIFGGVQMFVAQIMVGSIMAAE 372
Query: 375 FGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLF 434
G + + K ++ +V+++IC++V FGWSWGPLGW VPSEIFPLE RSAGQSI VAV+
Sbjct: 373 LGDHGGIGKGYAYIVLILICIYVAGFGWSWGPLGWLVPSEIFPLEIRSAGQSIVVAVSFL 432
Query: 435 FTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLPETKGVPIEEMILLWRKHWFW 494
FTFV+AQ FL++LC FK GIF FF GWV +MT FV+F LPETK VPIE+M ++WR HWFW
Sbjct: 433 FTFVVAQTFLSMLCHFKSGIFFFFGGWVVVMTAFVHFLLPETKKVPIEKMDIVWRDHWFW 492
Query: 495 KRIM--PVVEETNNQQS 509
K+I+ EE N ++
Sbjct: 493 KKIIGEEAAEENNKMEA 509
|
Active uptake of hexoses. Probable glucose/hydrogen symport. Ricinus communis (taxid: 3988) |
| >sp|Q9LT15|STP10_ARATH Sugar transport protein 10 OS=Arabidopsis thaliana GN=STP10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 575 bits (1482), Expect = e-163, Method: Compositional matrix adjust.
Identities = 270/480 (56%), Positives = 360/480 (75%), Gaps = 3/480 (0%)
Query: 23 VTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLK-KKHAHENNYCKYD 81
VT VI+ C VAA+GG +FGYD+GISGGVTSM+ FL KFF V + KK H+ YCK+D
Sbjct: 21 VTAFVIMTCIVAAMGGLLFGYDLGISGGVTSMEEFLTKFFPQVESQMKKAKHDTAYCKFD 80
Query: 82 NQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLT 141
NQ L FTSSLYLA LVASF+AS +TR +GR+ S+ GG++FL+GA NA A N++ML+
Sbjct: 81 NQMLQLFTSSLYLAALVASFMASVITRKHGRKVSMFIGGLAFLIGALFNAFAVNVSMLII 140
Query: 142 GRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETW 201
GR+LLGVG+GF NQ+ P+YLSEMAP +RG LN+ FQ+A T+GI AN+INYGT K+
Sbjct: 141 GRLLLGVGVGFANQSTPVYLSEMAPAKIRGALNIGFQMAITIGILVANLINYGTSKMAQH 200
Query: 202 GWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMV 261
GWR+SLGLAA PA++M +G +LP+TPNS++ERGK E +++L+KIRG V+ E+QD++
Sbjct: 201 GWRVSLGLAAVPAVVMVIGSFILPDTPNSMLERGKNEEAKQMLKKIRGADNVDHEFQDLI 260
Query: 262 DASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDA 321
DA E A +++P++NI+E + RP L+ +P FQ +TGIN I+FYAPVLF+++GF DA
Sbjct: 261 DAVEAAKKVENPWKNIMESKYRPALIFCSAIPFFQQITGINVIMFYAPVLFKTLGFGDDA 320
Query: 322 SLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPN--Q 379
+L S+ +TG V ST +SI VD+ GRR L + GGIQM CQ++V +G +FG +
Sbjct: 321 ALMSAVITGVVNMLSTFVSIYAVDRYGRRLLFLEGGIQMFICQLLVGSFIGARFGTSGTG 380
Query: 380 ELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVI 439
L+ + + ++ IC++V F WSWGPLGW VPSEI PLE R AGQ+I V+VN+FFTF+I
Sbjct: 381 TLTPATADWILAFICVYVAGFAWSWGPLGWLVPSEICPLEIRPAGQAINVSVNMFFTFLI 440
Query: 440 AQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLPETKGVPIEEMILLWRKHWFWKRIMP 499
Q FLT+LC KFG+F FFA V IMT+F+YF LPETKGVPIEEM +W++HWFWK+ +P
Sbjct: 441 GQFFLTMLCHMKFGLFYFFASMVAIMTVFIYFLLPETKGVPIEEMGRVWKQHWFWKKYIP 500
|
Mediates an active uptake of hexoses, probably by sugar/hydrogen symport. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9SX48|STP9_ARATH Sugar transport protein 9 OS=Arabidopsis thaliana GN=STP9 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 572 bits (1474), Expect = e-162, Method: Compositional matrix adjust.
Identities = 274/481 (56%), Positives = 357/481 (74%), Gaps = 4/481 (0%)
Query: 23 VTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAH-ENNYCKYD 81
VT VI+ C VAA+GG +FGYD+GISGGVTSM+ FL KFF +V + A E YCK+D
Sbjct: 21 VTVFVIMTCIVAAMGGLLFGYDLGISGGVTSMEEFLSKFFPEVDKQMHEARRETAYCKFD 80
Query: 82 NQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLT 141
NQ L FTSSLYLA L +SFVAS VTR YGR+ S+ GG++FL+G+ NA A N+AML+
Sbjct: 81 NQLLQLFTSSLYLAALASSFVASAVTRKYGRKISMFVGGVAFLIGSLFNAFATNVAMLIV 140
Query: 142 GRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETW 201
GR+LLGVG+GF NQ+ P+YLSEMAP +RG LN+ FQ+A T+GI AN+INYGT ++
Sbjct: 141 GRLLLGVGVGFANQSTPVYLSEMAPAKIRGALNIGFQMAITIGILIANLINYGTSQMAKN 200
Query: 202 GWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMV 261
GWR+SLGLAA PA++M +G +LP+TPNS++ERGK + R +L+KIRG V+ E+QD+
Sbjct: 201 GWRVSLGLAAVPAVIMVIGSFVLPDTPNSMLERGKYEQAREMLQKIRGADNVDEEFQDLC 260
Query: 262 DASELANSIKHPFRNILER-RNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGD 320
DA E A + +P++NI ++ + RP LV +P FQ +TGIN I+FYAPVLF+++GF D
Sbjct: 261 DACEAAKKVDNPWKNIFQQAKYRPALVFCSAIPFFQQITGINVIMFYAPVLFKTLGFADD 320
Query: 321 ASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQE 380
ASL S+ +TGAV STL+SI VD+ GRR L + GGIQMI Q++V ++G+KFG
Sbjct: 321 ASLISAVITGAVNVVSTLVSIYAVDRYGRRILFLEGGIQMIVSQIVVGTLIGMKFGTTGS 380
Query: 381 --LSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFV 438
L+ + + ++ ICL+V F WSWGPLGW VPSEI PLE R AGQ+I V+VN+FFTF+
Sbjct: 381 GTLTPATADWILAFICLYVAGFAWSWGPLGWLVPSEICPLEIRPAGQAINVSVNMFFTFL 440
Query: 439 IAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLPETKGVPIEEMILLWRKHWFWKRIM 498
I Q FLT+LC KFG+F FF G V +MT+F+YF LPETKGVPIEEM +W++H FWKR M
Sbjct: 441 IGQFFLTMLCHMKFGLFYFFGGMVAVMTVFIYFLLPETKGVPIEEMGRVWKQHPFWKRYM 500
Query: 499 P 499
P
Sbjct: 501 P 501
|
Mediates an active uptake of hexoses, probably by sugar/hydrogen symport. Mostly transports glucose, and barely galactose, xylose and mannose. Arabidopsis thaliana (taxid: 3702) |
| >sp|P23586|STP1_ARATH Sugar transport protein 1 OS=Arabidopsis thaliana GN=STP1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 572 bits (1474), Expect = e-162, Method: Compositional matrix adjust.
Identities = 290/505 (57%), Positives = 372/505 (73%), Gaps = 7/505 (1%)
Query: 8 PAG--VAKERAEQYQGKVTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDV 65
PAG V + + Y GK+TP V+ C VAA+GG IFGYDIGISGGVTSM +FLK+FF V
Sbjct: 2 PAGGFVVGDGQKAYPGKLTPFVLFTCVVAAMGGLIFGYDIGISGGVTSMPSFLKRFFPSV 61
Query: 66 YLKKKH-AHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFL 124
Y K++ A N YC+YD+ L FTSSLYLA L++S VAS VTR +GRR S++ GGI F
Sbjct: 62 YRKQQEDASTNQYCQYDSPTLTMFTSSLYLAALISSLVASTVTRKFGRRLSMLFGGILFC 121
Query: 125 LGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLG 184
GA +N A ++ ML+ GRILLG GIGF NQAVPLYLSEMAP RG LN+ FQL+ T+G
Sbjct: 122 AGALINGFAKHVWMLIVGRILLGFGIGFANQAVPLYLSEMAPYKYRGALNIGFQLSITIG 181
Query: 185 IFTANMINYGTQKLET-WGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRV 243
I A ++NY K++ WGWRLSLG A PAL++T+G ++LP+TPNS+IERG+ E +
Sbjct: 182 ILVAEVLNYFFAKIKGGWGWRLSLGGAVVPALIITIGSLVLPDTPNSMIERGQHEEAKTK 241
Query: 244 LEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINS 303
L +IRG +V+ E+ D+V AS+ + SI+HP+RN+L R+ RP L MA+ +P FQ LTGIN
Sbjct: 242 LRRIRGVDDVSQEFDDLVAASKESQSIEHPWRNLLRRKYRPHLTMAVMIPFFQQLTGINV 301
Query: 304 ILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITC 363
I+FYAPVLF ++GF DASL S+ +TG+V ++TL+SI VD+ GRR L + GG QM+ C
Sbjct: 302 IMFYAPVLFNTIGFTTDASLMSAVVTGSVNVAATLVSIYGVDRWGRRFLFLEGGTQMLIC 361
Query: 364 QVIVSIILGLKFGPN---QELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLET 420
Q +V+ +G KFG + EL K ++I+VV IC++V F WSWGPLGW VPSEIFPLE
Sbjct: 362 QAVVAACIGAKFGVDGTPGELPKWYAIVVVTFICIYVAGFAWSWGPLGWLVPSEIFPLEI 421
Query: 421 RSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLPETKGVP 480
RSA QSITV+VN+ FTF+IAQIFLT+LC KFG+FL FA +V +M+IFVY FLPETKG+P
Sbjct: 422 RSAAQSITVSVNMIFTFIIAQIFLTMLCHLKFGLFLVFAFFVVVMSIFVYIFLPETKGIP 481
Query: 481 IEEMILLWRKHWFWKRIMPVVEETN 505
IEEM +WR HW+W R + E N
Sbjct: 482 IEEMGQVWRSHWYWSRFVEDGEYGN 506
|
Major hexose transporter. Mediates an active uptake of hexoses, by sugar/hydrogen symport. Can transport glucose, 3-O-methylglucose, fructose, xylose, mannose, galactose, fucose, 2-deoxyglucose and arabinose. Confers sensitivity to galactose in seedlings. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q41144|STC_RICCO Sugar carrier protein C OS=Ricinus communis GN=STC PE=2 SV=1 | Back alignment and function description |
|---|
Score = 567 bits (1461), Expect = e-161, Method: Compositional matrix adjust.
Identities = 287/507 (56%), Positives = 379/507 (74%), Gaps = 10/507 (1%)
Query: 2 AGGSLGPAGVAKERAEQYQGKVTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKF 61
A G + P+G ++ Y G +T V V C VAA+GG IFGYDIGISGGVTSMD+FLKKF
Sbjct: 3 AVGGIPPSGGNRK---VYPGNLTLYVTVTCVVAAMGGLIFGYDIGISGGVTSMDSFLKKF 59
Query: 62 FHDVYLKKK-HAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGG 120
F VY KKK N YC+YD+Q L FTSSLYLA L+AS VAS +TR +GR+ S++ GG
Sbjct: 60 FPSVYRKKKADESSNQYCQYDSQTLTMFTSSLYLAALIASLVASTITRKFGRKLSMLFGG 119
Query: 121 ISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLA 180
+ F GA +N AA + ML+ GRILLG GIGF NQ+VPLYLSEMAP RG LN+ FQL+
Sbjct: 120 VLFCAGAIINGAAKAVWMLILGRILLGFGIGFANQSVPLYLSEMAPYKYRGALNIGFQLS 179
Query: 181 TTLGIFTANMINYGTQKLET-WGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVE 239
T+GI AN++NY K++ WGWRLSLG A PAL++TVG ++LP+TPNS+IERG+ E
Sbjct: 180 ITIGILVANVLNYFFAKIKGGWGWRLSLGGAMVPALIITVGSLVLPDTPNSMIERGQHEE 239
Query: 240 GRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILT 299
R L+++RG ++V+ E+ D+V ASE + ++HP+RN+L+R+ RP L MAI +P FQ LT
Sbjct: 240 ARAHLKRVRGVEDVDEEFTDLVHASEDSKKVEHPWRNLLQRKYRPHLSMAIAIPFFQQLT 299
Query: 300 GINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQ 359
GIN I+FYAPVLF ++GF DA+L S+ +TG V +T++SI VDK GRR L + GG+Q
Sbjct: 300 GINVIMFYAPVLFDTIGFGSDAALMSAVITGLVNVFATMVSIYGVDKWGRRFLFLEGGVQ 359
Query: 360 MITCQVIVSIILGLKFGPN---QELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIF 416
M+ CQ IV+ +G KFG + +L + ++++VV+ IC++V F WSWGPLGW VPSEIF
Sbjct: 360 MLICQAIVAACIGAKFGVDGAPGDLPQWYAVVVVLFICIYVSGFAWSWGPLGWLVPSEIF 419
Query: 417 PLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLPET 476
PLE RSA QS+ V+VN+FFTFV+AQ+FL +LC KFG+F+FF+ +V IM+IFVY+FLPET
Sbjct: 420 PLEIRSAAQSVNVSVNMFFTFVVAQVFLIMLCHLKFGLFIFFSFFVLIMSIFVYYFLPET 479
Query: 477 KGVPIEEMILLWRKHWFWKRIMPVVEE 503
KG+PIEEM +W++HW+W R VV+E
Sbjct: 480 KGIPIEEMGQVWKQHWYWSRY--VVDE 504
|
Ricinus communis (taxid: 3988) |
| >sp|Q39228|STP4_ARATH Sugar transport protein 4 OS=Arabidopsis thaliana GN=STP4 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 560 bits (1442), Expect = e-158, Method: Compositional matrix adjust.
Identities = 273/486 (56%), Positives = 357/486 (73%), Gaps = 3/486 (0%)
Query: 17 EQYQGKVTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENN 76
Y K+TP V V CF+ A GG IFGYD+GISGGVTSM+ FL++FF VY K K AHEN
Sbjct: 13 RNYNYKLTPKVFVTCFIGAFGGLIFGYDLGISGGVTSMEPFLEEFFPYVYKKMKSAHENE 72
Query: 77 YCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANL 136
YC++D+Q L FTSSLY+A LV+S AS +TR +GR+ S+ GG +F +G+A N A N+
Sbjct: 73 YCRFDSQLLTLFTSSLYVAALVSSLFASTITRVFGRKWSMFLGGFTFFIGSAFNGFAQNI 132
Query: 137 AMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQ 196
AMLL GRILLG G+GF NQ+VP+YLSEMAP +LRG N FQ+A GI A +INY T
Sbjct: 133 AMLLIGRILLGFGVGFANQSVPVYLSEMAPPNLRGAFNNGFQVAIIFGIVVATIINYFTA 192
Query: 197 KLE-TWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNA 255
+++ GWR+SLGLA PA+M+ +G ++LP+TPNSLIERG E + +L+ IRGT EV+
Sbjct: 193 QMKGNIGWRISLGLACVPAVMIMIGALILPDTPNSLIERGYTEEAKEMLQSIRGTNEVDE 252
Query: 256 EYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSM 315
E+QD++DASE + +KHP++NI+ R RPQL+M F+P FQ LTGIN I FYAPVLFQ++
Sbjct: 253 EFQDLIDASEESKQVKHPWKNIMLPRYRPQLIMTCFIPFFQQLTGINVITFYAPVLFQTL 312
Query: 316 GFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKF 375
GF ASL S+ +TG + T +S+ TVD+ GRR L + GGIQM+ Q+ + ++G+KF
Sbjct: 313 GFGSKASLLSAMVTGIIELLCTFVSVFTVDRFGRRILFLQGGIQMLVSQIAIGAMIGVKF 372
Query: 376 G--PNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNL 433
G + KS + L+V +IC++V F WSWGPLGW VPSEI PLE RSA Q+I V+VN+
Sbjct: 373 GVAGTGNIGKSDANLIVALICIYVAGFAWSWGPLGWLVPSEISPLEIRSAAQAINVSVNM 432
Query: 434 FFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLPETKGVPIEEMILLWRKHWF 493
FFTF++AQ+FLT+LC KFG+F FFA +V IMTIF+Y LPETK VPIEEM +W+ HWF
Sbjct: 433 FFTFLVAQLFLTMLCHMKFGLFFFFAFFVVIMTIFIYLMLPETKNVPIEEMNRVWKAHWF 492
Query: 494 WKRIMP 499
W + +P
Sbjct: 493 WGKFIP 498
|
Mediates an active uptake of hexoses, probably by sugar/hydrogen symport. Can transport glucose, methylglucose, galactose, xylose and mannose, but not fructose. Arabidopsis thaliana (taxid: 3702) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 512 | ||||||
| 449457997 | 512 | PREDICTED: sugar transport protein 7-lik | 0.990 | 0.990 | 0.827 | 0.0 | |
| 297809951 | 515 | hypothetical protein ARALYDRAFT_327595 [ | 0.998 | 0.992 | 0.813 | 0.0 | |
| 15235215 | 513 | sugar transport protein 7 [Arabidopsis t | 0.982 | 0.980 | 0.819 | 0.0 | |
| 224088232 | 519 | predicted protein [Populus trichocarpa] | 0.990 | 0.976 | 0.820 | 0.0 | |
| 255565093 | 522 | sugar transporter, putative [Ricinus com | 0.994 | 0.975 | 0.844 | 0.0 | |
| 224144018 | 520 | predicted protein [Populus trichocarpa] | 0.974 | 0.959 | 0.837 | 0.0 | |
| 350538445 | 513 | hexose transporter 3 [Solanum lycopersic | 0.998 | 0.996 | 0.776 | 0.0 | |
| 226510111 | 523 | uncharacterized protein LOC100274108 [Ze | 0.974 | 0.954 | 0.789 | 0.0 | |
| 195638028 | 523 | sugar carrier protein A [Zea mays] | 0.974 | 0.954 | 0.787 | 0.0 | |
| 356556596 | 505 | PREDICTED: sugar transport protein 7-lik | 0.970 | 0.984 | 0.818 | 0.0 |
| >gi|449457997|ref|XP_004146734.1| PREDICTED: sugar transport protein 7-like [Cucumis sativus] gi|449505413|ref|XP_004162461.1| PREDICTED: sugar transport protein 7-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 884 bits (2284), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/509 (82%), Positives = 466/509 (91%), Gaps = 2/509 (0%)
Query: 1 MAGGSLGPAGVAKERAEQYQGKVTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKK 60
MAGGS PAGVAKERAEQY+G+VTP V++AC VAAIGGSIFGYDIGISGGVTSM+ FLKK
Sbjct: 1 MAGGSFAPAGVAKERAEQYKGRVTPYVVIACLVAAIGGSIFGYDIGISGGVTSMNPFLKK 60
Query: 61 FFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGG 120
FF VY K AHENNYCKY+NQGLAAFTSSLYLAGLV+S VASP+TR+YGRRASI+CGG
Sbjct: 61 FFPTVYRNKMRAHENNYCKYNNQGLAAFTSSLYLAGLVSSLVASPITRNYGRRASIVCGG 120
Query: 121 ISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLA 180
ISFL+GA LNAAA N+ ML+ GRI+LGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLA
Sbjct: 121 ISFLVGATLNAAAVNIEMLILGRIMLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLA 180
Query: 181 TTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEG 240
TTLGIFTANMINYGTQK++ WGWRLSLGLAA PAL+MTVGG+LLPETPNSL+ERG K +G
Sbjct: 181 TTLGIFTANMINYGTQKIDPWGWRLSLGLAAFPALLMTVGGLLLPETPNSLMERGAKEKG 240
Query: 241 RRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTG 300
R+ LEKIRGT +VNAEY+D+ +ASE ANSIKHPFRNI ++RNRPQLVMA FMP FQILTG
Sbjct: 241 RKTLEKIRGTNDVNAEYEDIQEASEFANSIKHPFRNIFQKRNRPQLVMAFFMPTFQILTG 300
Query: 301 INSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQM 360
INSILFYAPVLFQSMGF GDA+LYSSA+TGAVLASSTLISIATVD+LGRR LLISGGIQM
Sbjct: 301 INSILFYAPVLFQSMGFGGDAALYSSALTGAVLASSTLISIATVDRLGRRVLLISGGIQM 360
Query: 361 ITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLET 420
ITCQV+V+IILG+KFG N+ELSK FSILVV+VICLFVLAFGWSWGPLGWT+PSEIFPLET
Sbjct: 361 ITCQVVVAIILGVKFGNNEELSKGFSILVVIVICLFVLAFGWSWGPLGWTIPSEIFPLET 420
Query: 421 RSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLPETKGVP 480
RSAGQSITVAVNL FTFVIAQ FL+LLC+ K+GIFLFFAGW+ +MT+FVY FLPETKGVP
Sbjct: 421 RSAGQSITVAVNLLFTFVIAQSFLSLLCALKYGIFLFFAGWIIVMTVFVYIFLPETKGVP 480
Query: 481 IEEMILLWRKHWFWKRIMPVVEETNNQQS 509
IEEMIL+WRKHWFWK +MP +N QS
Sbjct: 481 IEEMILMWRKHWFWKNVMP--SNVDNDQS 507
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297809951|ref|XP_002872859.1| hypothetical protein ARALYDRAFT_327595 [Arabidopsis lyrata subsp. lyrata] gi|297318696|gb|EFH49118.1| hypothetical protein ARALYDRAFT_327595 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/514 (81%), Positives = 466/514 (90%), Gaps = 3/514 (0%)
Query: 1 MAGGSLGPAGVAKERAEQYQGKVTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKK 60
MAGGS GP GVAKERAEQYQGKVT VI+AC VAAIGGSIFGYDIG+SGGVTSMD FL++
Sbjct: 1 MAGGSFGPTGVAKERAEQYQGKVTSYVIIACLVAAIGGSIFGYDIGVSGGVTSMDEFLEE 60
Query: 61 FFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGG 120
FFH VY KKKHAHE+NYCKYDNQGLAAFTSSLYLAGLV++ VASPVTR+YGRRASI+CGG
Sbjct: 61 FFHTVYEKKKHAHESNYCKYDNQGLAAFTSSLYLAGLVSTLVASPVTRNYGRRASIVCGG 120
Query: 121 ISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLA 180
ISFL+G+ALNA A NLAMLL GRI+LGVGIGFGNQAVPLYLSE+APTHLRGGLNMMFQLA
Sbjct: 121 ISFLIGSALNAGAVNLAMLLAGRIMLGVGIGFGNQAVPLYLSEVAPTHLRGGLNMMFQLA 180
Query: 181 TTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEG 240
TT+GIFTANM+NYGTQ+L+ WGWRLSLGLAA PAL+MT+GG LPETPNSL+ERG G
Sbjct: 181 TTIGIFTANMVNYGTQQLKPWGWRLSLGLAAFPALLMTLGGYFLPETPNSLVERGLTERG 240
Query: 241 RRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTG 300
RRVL K+RGT+ VNAE QDMVDASELANSIKHPFRNIL++R+RPQLVMAI MPMFQILTG
Sbjct: 241 RRVLVKLRGTETVNAELQDMVDASELANSIKHPFRNILQKRHRPQLVMAICMPMFQILTG 300
Query: 301 INSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQM 360
INSILFYAPVLFQ+MGF G+ASLYSSA+TGAVL ST ISI VD+LGRRALLI+GGIQM
Sbjct: 301 INSILFYAPVLFQTMGFGGNASLYSSALTGAVLVLSTFISIGLVDRLGRRALLITGGIQM 360
Query: 361 ITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLET 420
I CQVIV++ILG+KFG NQELSK +S++VVV ICLFV+AFGWSWGPLGWT+PSEIFPLET
Sbjct: 361 IICQVIVAVILGVKFGDNQELSKGYSVIVVVFICLFVIAFGWSWGPLGWTIPSEIFPLET 420
Query: 421 RSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLPETKGVP 480
RSAGQSITVAVNL FTF+IAQ FL LLC+FKFGIFLFFAGWVT+MTIFVYF LPETKGVP
Sbjct: 421 RSAGQSITVAVNLLFTFIIAQAFLGLLCAFKFGIFLFFAGWVTVMTIFVYFLLPETKGVP 480
Query: 481 IEEMILLWRKHWFWKRIMPVV---EETNNQQSIS 511
IEEM LLW KHWFWK+++P +E+ N+ + S
Sbjct: 481 IEEMTLLWSKHWFWKKVLPATNLEDESKNESNNS 514
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15235215|ref|NP_192114.1| sugar transport protein 7 [Arabidopsis thaliana] gi|75317777|sp|O04249.1|STP7_ARATH RecName: Full=Sugar transport protein 7; AltName: Full=Hexose transporter 7 gi|2104529|gb|AAC78697.1| putative hexose transporter [Arabidopsis thaliana] gi|7268589|emb|CAB80698.1| putative hexose transporter [Arabidopsis thaliana] gi|15487244|emb|CAC69067.1| STP7 protein [Arabidopsis thaliana] gi|332656716|gb|AEE82116.1| sugar transport protein 7 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/505 (81%), Positives = 460/505 (91%), Gaps = 2/505 (0%)
Query: 1 MAGGSLGPAGVAKERAEQYQGKVTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKK 60
MAGGS GP GVAKERAEQYQGKVT VI+AC VAAIGGSIFGYDIGISGGVTSMD FL++
Sbjct: 1 MAGGSFGPTGVAKERAEQYQGKVTSYVIIACLVAAIGGSIFGYDIGISGGVTSMDEFLEE 60
Query: 61 FFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGG 120
FFH VY KKK AHE+NYCKYDNQGLAAFTSSLYLAGLV++ VASP+TR+YGRRASI+CGG
Sbjct: 61 FFHTVYEKKKQAHESNYCKYDNQGLAAFTSSLYLAGLVSTLVASPITRNYGRRASIVCGG 120
Query: 121 ISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLA 180
ISFL+G+ LNA A NLAMLL GRI+LGVGIGFGNQAVPLYLSE+APTHLRGGLNMMFQLA
Sbjct: 121 ISFLIGSGLNAGAVNLAMLLAGRIMLGVGIGFGNQAVPLYLSEVAPTHLRGGLNMMFQLA 180
Query: 181 TTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEG 240
TT+GIFTANM+NYGTQ+L+ WGWRLSLGLAA PAL+MT+GG LPETPNSL+ERG G
Sbjct: 181 TTIGIFTANMVNYGTQQLKPWGWRLSLGLAAFPALLMTLGGYFLPETPNSLVERGLTERG 240
Query: 241 RRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTG 300
RRVL K+RGT+ VNAE QDMVDASELANSIKHPFRNIL++R+RPQLVMAI MPMFQILTG
Sbjct: 241 RRVLVKLRGTENVNAELQDMVDASELANSIKHPFRNILQKRHRPQLVMAICMPMFQILTG 300
Query: 301 INSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQM 360
INSILFYAPVLFQ+MGF G+ASLYSSA+TGAVL ST ISI VD+LGRRALLI+GGIQM
Sbjct: 301 INSILFYAPVLFQTMGFGGNASLYSSALTGAVLVLSTFISIGLVDRLGRRALLITGGIQM 360
Query: 361 ITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLET 420
I CQVIV++ILG+KFG NQELSK +S++VV+ ICLFV+AFGWSWGPLGWT+PSEIFPLET
Sbjct: 361 IICQVIVAVILGVKFGDNQELSKGYSVIVVIFICLFVVAFGWSWGPLGWTIPSEIFPLET 420
Query: 421 RSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLPETKGVP 480
RSAGQSITVAVNL FTF+IAQ FL LLC+FKFGIFLFFAGWVT+MTIFVYF LPETKGVP
Sbjct: 421 RSAGQSITVAVNLLFTFIIAQAFLGLLCAFKFGIFLFFAGWVTVMTIFVYFLLPETKGVP 480
Query: 481 IEEMILLWRKHWFWKRIMPVVEETN 505
IEEM LLW KHWFWK+++P + TN
Sbjct: 481 IEEMTLLWSKHWFWKKVLP--DATN 503
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224088232|ref|XP_002308382.1| predicted protein [Populus trichocarpa] gi|222854358|gb|EEE91905.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/507 (82%), Positives = 461/507 (90%)
Query: 1 MAGGSLGPAGVAKERAEQYQGKVTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKK 60
MAGGS+GPAGVAKERAEQYQG+VT SVI+AC +AA+GGS+FGYDIGISGGVTSMD FLKK
Sbjct: 1 MAGGSIGPAGVAKERAEQYQGRVTCSVIIACVIAAVGGSLFGYDIGISGGVTSMDGFLKK 60
Query: 61 FFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGG 120
FFH VY KK+ AHENNYCKY++QGL+AFTSSLYLAGLV+S VASP+TR YGRR SIICGG
Sbjct: 61 FFHGVYEKKQRAHENNYCKYNDQGLSAFTSSLYLAGLVSSLVASPITRIYGRRISIICGG 120
Query: 121 ISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLA 180
SFL+GA LNA + NLAMLL GRI+LGVGIGFGNQAVPLYLSEMAPTHLRG LNMMFQLA
Sbjct: 121 SSFLIGAILNATSINLAMLLMGRIMLGVGIGFGNQAVPLYLSEMAPTHLRGALNMMFQLA 180
Query: 181 TTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEG 240
TT G+FTANM+NYGTQKL+ WGWRLSLGLAA PA++MTVGGI L ETPNSLIERG + +G
Sbjct: 181 TTSGVFTANMVNYGTQKLKPWGWRLSLGLAAFPAILMTVGGIYLSETPNSLIERGMRDKG 240
Query: 241 RRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTG 300
R+VLEKIRGTK V+AE+ DMVDASELANSIKHPFRNIL +RNRPQLVMAI +P FQILTG
Sbjct: 241 RKVLEKIRGTKNVDAEFDDMVDASELANSIKHPFRNILIKRNRPQLVMAILLPAFQILTG 300
Query: 301 INSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQM 360
INSILFYAPVLFQSMGF +ASLYSSA+TGA L SST I+IATVD+LGRR LLISGGIQM
Sbjct: 301 INSILFYAPVLFQSMGFGRNASLYSSAVTGAALCSSTFIAIATVDRLGRRFLLISGGIQM 360
Query: 361 ITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLET 420
ITCQVIVSIILG+KFG NQ+LSK FS+LVV+VICLFV+AFGWSWG LGWT+PSEIFPLET
Sbjct: 361 ITCQVIVSIILGVKFGDNQKLSKVFSVLVVIVICLFVVAFGWSWGGLGWTIPSEIFPLET 420
Query: 421 RSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLPETKGVP 480
RSAGQSITVAVNL FTFVIAQ+FL+LLC+FKFGIFLFFA W+ +MTIFVYFFLPETKGVP
Sbjct: 421 RSAGQSITVAVNLLFTFVIAQVFLSLLCAFKFGIFLFFASWILVMTIFVYFFLPETKGVP 480
Query: 481 IEEMILLWRKHWFWKRIMPVVEETNNQ 507
IEEMI LWRKHWFWK+I+P + Q
Sbjct: 481 IEEMIFLWRKHWFWKKIVPGNPNDDTQ 507
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255565093|ref|XP_002523539.1| sugar transporter, putative [Ricinus communis] gi|1723182|sp|Q10710.1|STA_RICCO RecName: Full=Sugar carrier protein A gi|169736|gb|AAA79769.1| sugar carrier protein [Ricinus communis] gi|223537246|gb|EEF38878.1| sugar transporter, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 862 bits (2228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/509 (84%), Positives = 467/509 (91%)
Query: 1 MAGGSLGPAGVAKERAEQYQGKVTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKK 60
MAGGSL PAGVAKERAEQYQGKVT +V VAC VAA+GGSIFGYDIGISGGV SMDAFL+K
Sbjct: 1 MAGGSLAPAGVAKERAEQYQGKVTFAVFVACMVAAVGGSIFGYDIGISGGVISMDAFLEK 60
Query: 61 FFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGG 120
FF VYLKKKHAHENNYCKYD+Q LAAFTSSLYLAGL AS VA P+TR YGRRASII GG
Sbjct: 61 FFRSVYLKKKHAHENNYCKYDDQRLAAFTSSLYLAGLAASLVAGPITRIYGRRASIISGG 120
Query: 121 ISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLA 180
ISFL+GAALNA A NLAMLL GRI+LGVGIGFGNQAVPLYLSEMAPTHLRGGLN+MFQLA
Sbjct: 121 ISFLIGAALNATAINLAMLLLGRIMLGVGIGFGNQAVPLYLSEMAPTHLRGGLNIMFQLA 180
Query: 181 TTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEG 240
TT GIFTANM+NYGT KLE+WGWRLSLGLAAAPAL+MT+GG+LLPETPNSLIE+G +G
Sbjct: 181 TTSGIFTANMVNYGTHKLESWGWRLSLGLAAAPALLMTIGGLLLPETPNSLIEQGLHEKG 240
Query: 241 RRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTG 300
R VLEKIRGTK V+AE+QDM+DASELANSIKHPFRNILE+RNRPQLVMAIFMP FQILTG
Sbjct: 241 RNVLEKIRGTKHVDAEFQDMLDASELANSIKHPFRNILEKRNRPQLVMAIFMPTFQILTG 300
Query: 301 INSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQM 360
IN ILFYAP LFQSMGF G+A+LYSSA+TGAVL SST ISIATVD+LGRR LLISGGIQM
Sbjct: 301 INIILFYAPPLFQSMGFGGNAALYSSAVTGAVLCSSTFISIATVDRLGRRFLLISGGIQM 360
Query: 361 ITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLET 420
ITCQVIV+IILG+KFG NQ+LSKSFS+LVV++ICLFVLAFGWSWGPLGWTVPSEIFPLET
Sbjct: 361 ITCQVIVAIILGVKFGDNQQLSKSFSVLVVIMICLFVLAFGWSWGPLGWTVPSEIFPLET 420
Query: 421 RSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLPETKGVP 480
RSAGQSITVAVNLFFTFVIAQ F +LLC+FKFGIFLFFAGWVT+MT FVY FLPETKGVP
Sbjct: 421 RSAGQSITVAVNLFFTFVIAQSFPSLLCAFKFGIFLFFAGWVTVMTAFVYIFLPETKGVP 480
Query: 481 IEEMILLWRKHWFWKRIMPVVEETNNQQS 509
IEEMI LWRKHWFWK+I+P E ++ +
Sbjct: 481 IEEMIFLWRKHWFWKKIVPGQPEVDDSRE 509
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224144018|ref|XP_002325158.1| predicted protein [Populus trichocarpa] gi|222866592|gb|EEF03723.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/499 (83%), Positives = 454/499 (90%)
Query: 1 MAGGSLGPAGVAKERAEQYQGKVTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKK 60
MAGG GPAGVAKERA QYQGKVT SVI+AC VAA+GGS+FGYDIGISGGVTSMD FL K
Sbjct: 1 MAGGHFGPAGVAKERAGQYQGKVTFSVIIACVVAAVGGSLFGYDIGISGGVTSMDGFLLK 60
Query: 61 FFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGG 120
FF VY KK+H HENNYCKY+NQGL+AFTSSLYLAGLVAS VASPVTR YGRRASIICGG
Sbjct: 61 FFPGVYEKKQHVHENNYCKYNNQGLSAFTSSLYLAGLVASLVASPVTRIYGRRASIICGG 120
Query: 121 ISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLA 180
+SFL+GA LNA+A NLAMLL GRI+LGVGIGFGNQAVP+YLSEMAPTHLRG LNMMFQLA
Sbjct: 121 VSFLIGATLNASAINLAMLLLGRIMLGVGIGFGNQAVPVYLSEMAPTHLRGALNMMFQLA 180
Query: 181 TTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEG 240
TT GIFTANMINYGTQKLE WGWRLSLGLAA PA++MTVGGI+L ETPNSLIERG + EG
Sbjct: 181 TTTGIFTANMINYGTQKLEPWGWRLSLGLAAVPAVLMTVGGIVLSETPNSLIERGMQDEG 240
Query: 241 RRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTG 300
R+VLEKIRGTK V+AE++DMVDASELANSIKHPFRNIL +RNRPQLVMAI +P FQILTG
Sbjct: 241 RKVLEKIRGTKNVDAEFEDMVDASELANSIKHPFRNILTKRNRPQLVMAILLPAFQILTG 300
Query: 301 INSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQM 360
INSILFYAPVLFQSMGF G+ASLY+SA+TG VL SST I+IATVD++GRR LLISGGIQM
Sbjct: 301 INSILFYAPVLFQSMGFGGNASLYASAVTGGVLCSSTFITIATVDRVGRRFLLISGGIQM 360
Query: 361 ITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLET 420
I CQVIVS+IL LKFG NQ LSK FS+LVVV+ICLFVLAFGWSWG LGWT+PSEIFPLET
Sbjct: 361 IICQVIVSVILRLKFGDNQHLSKGFSVLVVVMICLFVLAFGWSWGGLGWTIPSEIFPLET 420
Query: 421 RSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLPETKGVP 480
RSAGQ ITVAVNL FTF IAQ FL+LLC+FKFGIFLFFA WV +MTIFVYFFLPETKGVP
Sbjct: 421 RSAGQGITVAVNLLFTFAIAQSFLSLLCAFKFGIFLFFACWVLLMTIFVYFFLPETKGVP 480
Query: 481 IEEMILLWRKHWFWKRIMP 499
IEEMI +WRKHWFWKRI+P
Sbjct: 481 IEEMIFMWRKHWFWKRIVP 499
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|350538445|ref|NP_001234855.1| hexose transporter 3 [Solanum lycopersicum] gi|260619535|gb|ACX47460.1| hexose transporter 3 [Solanum lycopersicum] | Back alignment and taxonomy information |
|---|
Score = 835 bits (2158), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/511 (77%), Positives = 452/511 (88%)
Query: 1 MAGGSLGPAGVAKERAEQYQGKVTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKK 60
MAGG +G GV K RAE Y GK+T VI+AC VAA+GGS+FGYDIGISGGVTSMD FL++
Sbjct: 1 MAGGGIGSTGVNKGRAENYNGKLTLYVIIACIVAAVGGSLFGYDIGISGGVTSMDEFLRR 60
Query: 61 FFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGG 120
FF+ VYLKK+H HE+NYCKY+NQ LAAFTSSLY+AGLVAS VASP+TR+YGRRASIICGG
Sbjct: 61 FFYSVYLKKQHVHEDNYCKYNNQVLAAFTSSLYMAGLVASLVASPITRNYGRRASIICGG 120
Query: 121 ISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLA 180
ISF +GA LNAAA NL MLL+GRI+LGVGIGFGNQAVPLYLSEMAP HLRG LNMMFQLA
Sbjct: 121 ISFFIGAVLNAAAVNLGMLLSGRIMLGVGIGFGNQAVPLYLSEMAPAHLRGCLNMMFQLA 180
Query: 181 TTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEG 240
TTLGIFTANMINYGT KL WGWRLSLGLAAAPA +MTVGG+LLPETPNSLIE+G K +G
Sbjct: 181 TTLGIFTANMINYGTSKLHPWGWRLSLGLAAAPAFVMTVGGMLLPETPNSLIEQGNKTKG 240
Query: 241 RRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTG 300
R VLE+IRGT+ V+AE++DMVDASELA S+KHPFRNIL+RRNRPQL+MAI MP FQILTG
Sbjct: 241 RHVLERIRGTENVDAEFEDMVDASELARSVKHPFRNILKRRNRPQLIMAILMPTFQILTG 300
Query: 301 INSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQM 360
IN ILFYAPVLFQSMGFK ASLYSSA+TGAVLASSTL+S+ATVD+ GRR LLI+GGIQM
Sbjct: 301 INIILFYAPVLFQSMGFKRAASLYSSALTGAVLASSTLLSMATVDRWGRRVLLITGGIQM 360
Query: 361 ITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLET 420
I CQVIV+IILGLKFG ++ELS+ +SI+VVV ICLFV AFG+SWGPLGWTVPSEIFPLET
Sbjct: 361 IICQVIVAIILGLKFGSDKELSRGYSIIVVVFICLFVAAFGYSWGPLGWTVPSEIFPLET 420
Query: 421 RSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLPETKGVP 480
RSAGQSITV VNLFFTF IAQ FL+LLC+ +FGIFLFF+ W+ +MTIF+Y FLPETKGVP
Sbjct: 421 RSAGQSITVTVNLFFTFAIAQSFLSLLCAMRFGIFLFFSCWIAVMTIFIYLFLPETKGVP 480
Query: 481 IEEMILLWRKHWFWKRIMPVVEETNNQQSIS 511
IEEM+ LW KHWFWK+I+ ++ N ++
Sbjct: 481 IEEMMRLWEKHWFWKKIVSEDQQVKNTNGLN 511
|
Source: Solanum lycopersicum Species: Solanum lycopersicum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|226510111|ref|NP_001141959.1| uncharacterized protein LOC100274108 [Zea mays] gi|194706590|gb|ACF87379.1| unknown [Zea mays] | Back alignment and taxonomy information |
|---|
Score = 832 bits (2149), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/499 (78%), Positives = 449/499 (89%)
Query: 1 MAGGSLGPAGVAKERAEQYQGKVTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKK 60
MAGG + GV ERA QY+G++T +V C VAA+GG+IFGYDIGISGGVTSMD FL+K
Sbjct: 1 MAGGGVAALGVKTERAAQYKGRMTLAVATTCLVAAVGGAIFGYDIGISGGVTSMDPFLEK 60
Query: 61 FFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGG 120
FF V+ +K +NNYCKYDNQGLAAFTSSLYLAGLVAS VASPVTR+YGR+ASI+CGG
Sbjct: 61 FFPVVFHRKNSGGKNNYCKYDNQGLAAFTSSLYLAGLVASLVASPVTRNYGRKASIVCGG 120
Query: 121 ISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLA 180
+SFL+GAALN AA NLAML+ GRI+LGVGIGFGNQAVPLYLSEMAP HLRGGLNMMFQLA
Sbjct: 121 VSFLIGAALNVAAVNLAMLILGRIMLGVGIGFGNQAVPLYLSEMAPAHLRGGLNMMFQLA 180
Query: 181 TTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEG 240
TTLGIFTAN+INYGTQ ++ WGWRLSLGLAA PAL+MT+GG+ LPETPNSLIERG+ EG
Sbjct: 181 TTLGIFTANLINYGTQNIKPWGWRLSLGLAAVPALLMTLGGLFLPETPNSLIERGRVEEG 240
Query: 241 RRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTG 300
RRVLE+IRGT +V+AE+ DMV+ASELAN+++HPFRNIL+ RNRPQLVMA+ MP FQILTG
Sbjct: 241 RRVLERIRGTADVDAEFTDMVEASELANTVEHPFRNILQPRNRPQLVMAVCMPAFQILTG 300
Query: 301 INSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQM 360
INSILFYAPVLFQSMGF G+ASLYSS +TGAVL SSTLISI VD+LGRR LLISGGIQM
Sbjct: 301 INSILFYAPVLFQSMGFGGNASLYSSVLTGAVLFSSTLISIGIVDRLGRRKLLISGGIQM 360
Query: 361 ITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLET 420
I CQVIV++ILG+KFG ++L++S+S+ VVVVICLFVLAFGWSWGPLGWTVPSEIFPLET
Sbjct: 361 IVCQVIVAVILGVKFGAEKQLARSYSVAVVVVICLFVLAFGWSWGPLGWTVPSEIFPLET 420
Query: 421 RSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLPETKGVP 480
RSAGQSITVAVNL FTF IAQ FL+LLC+FKFGIFLFFAGW+T+MT+FVY FLPETKGVP
Sbjct: 421 RSAGQSITVAVNLLFTFAIAQAFLSLLCAFKFGIFLFFAGWITVMTVFVYVFLPETKGVP 480
Query: 481 IEEMILLWRKHWFWKRIMP 499
IEEM+LLWRKHWFWK++MP
Sbjct: 481 IEEMVLLWRKHWFWKKVMP 499
|
Source: Zea mays Species: Zea mays Genus: Zea Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|195638028|gb|ACG38482.1| sugar carrier protein A [Zea mays] | Back alignment and taxonomy information |
|---|
Score = 831 bits (2147), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/499 (78%), Positives = 449/499 (89%)
Query: 1 MAGGSLGPAGVAKERAEQYQGKVTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKK 60
MAGG + GV +RA QY+G++T +V C VAA+GG+IFGYDIGISGGVTSMD FL+K
Sbjct: 1 MAGGGVAALGVKTDRAAQYKGRMTLAVATTCLVAAVGGAIFGYDIGISGGVTSMDPFLEK 60
Query: 61 FFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGG 120
FF V+ +K +NNYCKYDNQGLAAFTSSLYLAGLVAS VASPVTR+YGR+ASI+CGG
Sbjct: 61 FFPVVFHRKNSGGKNNYCKYDNQGLAAFTSSLYLAGLVASLVASPVTRNYGRKASIVCGG 120
Query: 121 ISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLA 180
+SFL+GAALN AA NLAML+ GRI+LGVGIGFGNQAVPLYLSEMAP HLRGGLNMMFQLA
Sbjct: 121 VSFLIGAALNVAAVNLAMLILGRIMLGVGIGFGNQAVPLYLSEMAPAHLRGGLNMMFQLA 180
Query: 181 TTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEG 240
TTLGIFTAN+INYGTQ ++ WGWRLSLGLAA PAL+MT+GG+ LPETPNSLIERG+ EG
Sbjct: 181 TTLGIFTANLINYGTQNIKPWGWRLSLGLAAVPALLMTLGGLFLPETPNSLIERGRVEEG 240
Query: 241 RRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTG 300
RRVLE+IRGT +V+AE+ DMV+ASELAN+++HPFRNIL+ RNRPQLVMA+ MP FQILTG
Sbjct: 241 RRVLERIRGTADVDAEFTDMVEASELANTVEHPFRNILQPRNRPQLVMAVCMPAFQILTG 300
Query: 301 INSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQM 360
INSILFYAPVLFQSMGF G+ASLYSS +TGAVL SSTLISI VD+LGRR LLISGGIQM
Sbjct: 301 INSILFYAPVLFQSMGFGGNASLYSSVLTGAVLFSSTLISIGIVDRLGRRKLLISGGIQM 360
Query: 361 ITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLET 420
I CQVIV++ILG+KFG ++L++S+S+ VVVVICLFVLAFGWSWGPLGWTVPSEIFPLET
Sbjct: 361 IVCQVIVAVILGVKFGAEKQLARSYSVAVVVVICLFVLAFGWSWGPLGWTVPSEIFPLET 420
Query: 421 RSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLPETKGVP 480
RSAGQSITVAVNL FTF IAQ FL+LLC+FKFGIFLFFAGW+T+MT+FVY FLPETKGVP
Sbjct: 421 RSAGQSITVAVNLLFTFAIAQAFLSLLCAFKFGIFLFFAGWITVMTVFVYVFLPETKGVP 480
Query: 481 IEEMILLWRKHWFWKRIMP 499
IEEM+LLWRKHWFWK++MP
Sbjct: 481 IEEMVLLWRKHWFWKKVMP 499
|
Source: Zea mays Species: Zea mays Genus: Zea Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356556596|ref|XP_003546610.1| PREDICTED: sugar transport protein 7-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/497 (81%), Positives = 451/497 (90%)
Query: 1 MAGGSLGPAGVAKERAEQYQGKVTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKK 60
MAGGS V+KERAEQY+G+VT VI++C VAA GG++FGYDIGISGGVTSMD FL +
Sbjct: 1 MAGGSFTTGTVSKERAEQYKGRVTAYVIISCIVAATGGALFGYDIGISGGVTSMDDFLIE 60
Query: 61 FFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGG 120
FF VY +KKHAHENNYCKYDNQGLAAFTSSLY+AGLVAS +ASPVTR YGRR SII GG
Sbjct: 61 FFPSVYRQKKHAHENNYCKYDNQGLAAFTSSLYIAGLVASLMASPVTRKYGRRVSIIGGG 120
Query: 121 ISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLA 180
ISFL+G+ALNA+A NL ML+ GR++LGVGIGFGNQA+PLYLSEMAPTHLRGGLNMMFQ+A
Sbjct: 121 ISFLIGSALNASAVNLIMLILGRVMLGVGIGFGNQAIPLYLSEMAPTHLRGGLNMMFQVA 180
Query: 181 TTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEG 240
TT GIFTANMIN+GTQK++ WGWRLSLGLAA PAL+MTVGGI LP+TPNSLIERG +G
Sbjct: 181 TTFGIFTANMINFGTQKIKPWGWRLSLGLAAVPALLMTVGGIFLPDTPNSLIERGLAEKG 240
Query: 241 RRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTG 300
R++LEKIRGTKEV+AE+QDMVDASELA SIKHPFRNILERR RP+LVMAIFMP FQILTG
Sbjct: 241 RKLLEKIRGTKEVDAEFQDMVDASELAKSIKHPFRNILERRYRPELVMAIFMPTFQILTG 300
Query: 301 INSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQM 360
INSILFYAPVLFQSMGF GDASL SSA+TG VLASST ISIATVD+LGRR LL+SGG+QM
Sbjct: 301 INSILFYAPVLFQSMGFGGDASLISSALTGGVLASSTFISIATVDRLGRRVLLVSGGLQM 360
Query: 361 ITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLET 420
ITCQ+IV+IILG+KFG +QELSK FSILVVVVICLFV+AFGWSWGPLGWTVPSEIFPLE
Sbjct: 361 ITCQIIVAIILGVKFGADQELSKGFSILVVVVICLFVVAFGWSWGPLGWTVPSEIFPLEI 420
Query: 421 RSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLPETKGVP 480
RSAGQ ITVAVNL FTF+IAQ FL LLCSFKFGIFLFFAGW+TIMTIFVY FLPETKG+P
Sbjct: 421 RSAGQGITVAVNLLFTFIIAQAFLALLCSFKFGIFLFFAGWITIMTIFVYLFLPETKGIP 480
Query: 481 IEEMILLWRKHWFWKRI 497
IEEM +WR+HWFWKRI
Sbjct: 481 IEEMSFMWRRHWFWKRI 497
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 512 | ||||||
| TAIR|locus:2132213 | 513 | STP7 "sugar transporter protei | 0.982 | 0.980 | 0.780 | 6.1e-213 | |
| TAIR|locus:2151074 | 526 | MSS1 "AT5G26340" [Arabidopsis | 0.939 | 0.914 | 0.578 | 7.4e-153 | |
| TAIR|locus:2195995 | 504 | STP14 "sugar transport protein | 0.980 | 0.996 | 0.564 | 8.5e-152 | |
| TAIR|locus:2092221 | 514 | AT3G19940 [Arabidopsis thalian | 0.970 | 0.966 | 0.529 | 9.6e-144 | |
| TAIR|locus:2202044 | 522 | STP1 "AT1G11260" [Arabidopsis | 0.958 | 0.940 | 0.554 | 1.6e-143 | |
| TAIR|locus:2011957 | 517 | STP9 "sugar transporter 9" [Ar | 0.970 | 0.961 | 0.532 | 1.6e-141 | |
| TAIR|locus:2166781 | 514 | STP11 "sugar transporter 11" [ | 0.957 | 0.953 | 0.546 | 1.6e-141 | |
| TAIR|locus:2092286 | 514 | STP4 "sugar transporter 4" [Ar | 0.964 | 0.961 | 0.524 | 3.9e-140 | |
| TAIR|locus:2083003 | 507 | STP6 "sugar transporter 6" [Ar | 0.953 | 0.962 | 0.492 | 1.8e-133 | |
| TAIR|locus:2179734 | 507 | AT5G26250 [Arabidopsis thalian | 0.943 | 0.952 | 0.5 | 1e-132 |
| TAIR|locus:2132213 STP7 "sugar transporter protein 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2058 (729.5 bits), Expect = 6.1e-213, P = 6.1e-213
Identities = 394/505 (78%), Positives = 434/505 (85%)
Query: 1 MAGGSLGPAGVAKERAEQYQGKVTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKK 60
MAGGS GP GVAKERAEQYQGKVT VI+AC VAAIGGSIFGYDIGISGGVTSMD FL++
Sbjct: 1 MAGGSFGPTGVAKERAEQYQGKVTSYVIIACLVAAIGGSIFGYDIGISGGVTSMDEFLEE 60
Query: 61 FFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGG 120
FFH VY KKK AHE+NYCKYDNQGLAAFTSSLYLAGLV++ VASP+TR+YGRRASI+CGG
Sbjct: 61 FFHTVYEKKKQAHESNYCKYDNQGLAAFTSSLYLAGLVSTLVASPITRNYGRRASIVCGG 120
Query: 121 ISFXXXXXXXXXXXXXXXXXTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLA 180
ISF GRI+LGVGIGFGNQAVPLYLSE+APTHLRGGLNMMFQLA
Sbjct: 121 ISFLIGSGLNAGAVNLAMLLAGRIMLGVGIGFGNQAVPLYLSEVAPTHLRGGLNMMFQLA 180
Query: 181 TTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEG 240
TT+GIFTANM+NYGTQ+L+ WGWRLSLGLAA PAL+MT+GG LPETPNSL+ERG G
Sbjct: 181 TTIGIFTANMVNYGTQQLKPWGWRLSLGLAAFPALLMTLGGYFLPETPNSLVERGLTERG 240
Query: 241 RRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTG 300
RRVL K+RGT+ VNAE QDMVDASELANSIKHPFRNIL++R+RPQLVMAI MPMFQILTG
Sbjct: 241 RRVLVKLRGTENVNAELQDMVDASELANSIKHPFRNILQKRHRPQLVMAICMPMFQILTG 300
Query: 301 INSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQM 360
INSILFYAPVLFQ+MGF G+ASLYSSA+TGAVL ST ISI VD+LGRRALLI+GGIQM
Sbjct: 301 INSILFYAPVLFQTMGFGGNASLYSSALTGAVLVLSTFISIGLVDRLGRRALLITGGIQM 360
Query: 361 ITCQVIVSIILGLKFGPNQELSKXXXXXXXXXXXXXXLAFGWSWGPLGWTVPSEIFPLET 420
I CQVIV++ILG+KFG NQELSK +AFGWSWGPLGWT+PSEIFPLET
Sbjct: 361 IICQVIVAVILGVKFGDNQELSKGYSVIVVIFICLFVVAFGWSWGPLGWTIPSEIFPLET 420
Query: 421 RSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLPETKGVP 480
RSAGQSITVAVNL FTF+IAQ FL LLC+FKFGIFLFFAGWVT+MTIFVYF LPETKGVP
Sbjct: 421 RSAGQSITVAVNLLFTFIIAQAFLGLLCAFKFGIFLFFAGWVTVMTIFVYFLLPETKGVP 480
Query: 481 IEEMILLWRKHWFWKRIMPVVEETN 505
IEEM LLW KHWFWK+++P + TN
Sbjct: 481 IEEMTLLWSKHWFWKKVLP--DATN 503
|
|
| TAIR|locus:2151074 MSS1 "AT5G26340" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1491 (529.9 bits), Expect = 7.4e-153, P = 7.4e-153
Identities = 281/486 (57%), Positives = 357/486 (73%)
Query: 18 QYQGKVTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHA--HEN 75
+++ K+TP VI++C +AA GG +FGYD+G+SGGVTSM FL+KFF VY K ++
Sbjct: 14 EFEAKITPIVIISCIMAATGGLMFGYDVGVSGGVTSMPDFLEKFFPVVYRKVVAGADKDS 73
Query: 76 NYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFXXXXXXXXXXXX 135
NYCKYDNQGL FTSSLYLAGL A+F AS TR GRR +++ G+ F
Sbjct: 74 NYCKYDNQGLQLFTSSLYLAGLTATFFASYTTRTLGRRLTMLIAGVFFIIGVALNAGAQD 133
Query: 136 XXXXXTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGT 195
GRILLG G+GF NQAVPL+LSE+APT +RGGLN++FQL T+GI AN++NYGT
Sbjct: 134 LAMLIAGRILLGCGVGFANQAVPLFLSEIAPTRIRGGLNILFQLNVTIGILFANLVNYGT 193
Query: 196 QKLET-WGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVN 254
K++ WGWRLSLGLA PAL++TVG +L+ ETPNSL+ERG+ EG+ VL +IRGT V
Sbjct: 194 AKIKGGWGWRLSLGLAGIPALLLTVGALLVTETPNSLVERGRLDEGKAVLRRIRGTDNVE 253
Query: 255 AEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS 314
E+ D+++AS LA +KHPFRN+L+RRNRPQLV+A+ + +FQ TGIN+I+FYAPVLF +
Sbjct: 254 PEFADLLEASRLAKEVKHPFRNLLQRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFST 313
Query: 315 MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLK 374
+GF DASLYS+ +TGAV STL+SI +VDK+GRR LL+ G+QM QV+++IILG+K
Sbjct: 314 LGFGSDASLYSAVVTGAVNVLSTLVSIYSVDKVGRRVLLLEAGVQMFFSQVVIAIILGVK 373
Query: 375 F-GPNQELSKXXXXXXXXXXXXXXLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNL 433
+ LSK AF WSWGPLGW +PSE FPLETRSAGQS+TV VNL
Sbjct: 374 VTDTSTNLSKGFAILVVVMICTYVAAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNL 433
Query: 434 FFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLPETKGVPIEEMI-LLWRKHW 492
FTF+IAQ FL++LC FKFGIF+FF+ WV IM++FV F LPETK +PIEEM +W+KHW
Sbjct: 434 LFTFIIAQAFLSMLCHFKFGIFIFFSAWVLIMSVFVMFLLPETKNIPIEEMTERVWKKHW 493
Query: 493 FWKRIM 498
FW R M
Sbjct: 494 FWARFM 499
|
|
| TAIR|locus:2195995 STP14 "sugar transport protein 14" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1481 (526.4 bits), Expect = 8.5e-152, P = 8.5e-152
Identities = 285/505 (56%), Positives = 362/505 (71%)
Query: 1 MAGGSLGPAGVAKERAEQYQGKVTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKK 60
MAGG+L G K RA Y+ ++T I AC V ++GGS+FGYD+G+SGGVTSMD FLK+
Sbjct: 1 MAGGALTDEGGLK-RAHLYEHRITSYFIFACIVGSMGGSLFGYDLGVSGGVTSMDDFLKE 59
Query: 61 FFHDVYLKKK-HAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICG 119
FF +Y +K+ H +E +YCKYDNQ L FTSSLY AGL+++F AS VTR YGRR SI+ G
Sbjct: 60 FFPGIYKRKQMHLNETDYCKYDNQILTLFTSSLYFAGLISTFGASYVTRIYGRRGSILVG 119
Query: 120 GISFXXXXXXXXXXXXXXXXXTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQL 179
+SF GRI LG+GIGFGNQAVPLYLSEMAP +RG +N +FQL
Sbjct: 120 SVSFFLGGVINAAAKNILMLILGRIFLGIGIGFGNQAVPLYLSEMAPAKIRGTVNQLFQL 179
Query: 180 ATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVE 239
T +GI AN+INY T+++ WGWRLSLGLA PA++M +GG++LPETPNSL+E+GK +
Sbjct: 180 TTCIGILVANLINYKTEQIHPWGWRLSLGLATVPAILMFLGGLVLPETPNSLVEQGKLEK 239
Query: 240 GRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVM-AIFMPMFQIL 298
+ VL K+RGT + AE+QD+V+AS+ A ++K+PFRN+L RRNRPQLV+ AI +P FQ L
Sbjct: 240 AKAVLIKVRGTNNIEAEFQDLVEASDAARAVKNPFRNLLARRNRPQLVIGAIGLPAFQQL 299
Query: 299 TGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGI 358
TG+NSILFYAPV+FQS+GF G ASL SS +T A L + ++S+ + DK GRR LL+ +
Sbjct: 300 TGMNSILFYAPVMFQSLGFGGSASLISSTITNAALVVAAIMSMYSADKFGRRFLLLEASV 359
Query: 359 QMITCQVIVSIILGLKFGPNQELSKXXXXXXXXXXXXXXLAFGWSWGPLGWTVPSEIFPL 418
+M V+V + L LKFG +EL K LA+G SWGP+GW VPSE+FPL
Sbjct: 360 EMFCYMVVVGVTLALKFGEGKELPKSLGLILVVLICLFVLAYGRSWGPMGWLVPSELFPL 419
Query: 419 ETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLPETKG 478
ETRSAGQS+ V VNLFFT +IAQ FL LC K+GIFL FAG + M FVYF LPETK
Sbjct: 420 ETRSAGQSVVVCVNLFFTALIAQCFLVSLCHLKYGIFLLFAGLILGMGSFVYFLLPETKQ 479
Query: 479 VPIEEMILLWRKHWFWKRIMPVVEE 503
VPIEE+ LLWR+HW WK+ + V+E
Sbjct: 480 VPIEEVYLLWRQHWLWKKYVEDVDE 504
|
|
| TAIR|locus:2092221 AT3G19940 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1405 (499.6 bits), Expect = 9.6e-144, P = 9.6e-144
Identities = 266/502 (52%), Positives = 349/502 (69%)
Query: 1 MAGGSLGPAGVAKERAEQYQGKVTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKK 60
MAGG+ G R+ Y+G VT VI+ C VAA+GG +FGYD+GISGGVTSM+ FL K
Sbjct: 1 MAGGAFVSEGGGGGRS--YEGGVTAFVIMTCIVAAMGGLLFGYDLGISGGVTSMEEFLTK 58
Query: 61 FFHDVYLKKKHA-HENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICG 119
FF V + K A H+ YCK+DNQ L FTSSLYLA LVASF+AS +TR +GR+ S+ G
Sbjct: 59 FFPQVESQMKKAKHDTAYCKFDNQMLQLFTSSLYLAALVASFMASVITRKHGRKVSMFIG 118
Query: 120 GISFXXXXXXXXXXXXXXXXXTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQL 179
G++F GR+LLGVG+GF NQ+ P+YLSEMAP +RG LN+ FQ+
Sbjct: 119 GLAFLIGALFNAFAVNVSMLIIGRLLLGVGVGFANQSTPVYLSEMAPAKIRGALNIGFQM 178
Query: 180 ATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVE 239
A T+GI AN+INYGT K+ GWR+SLGLAA PA++M +G +LP+TPNS++ERGK E
Sbjct: 179 AITIGILVANLINYGTSKMAQHGWRVSLGLAAVPAVVMVIGSFILPDTPNSMLERGKNEE 238
Query: 240 GRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILT 299
+++L+KIRG V+ E+QD++DA E A +++P++NI+E + RP L+ +P FQ +T
Sbjct: 239 AKQMLKKIRGADNVDHEFQDLIDAVEAAKKVENPWKNIMESKYRPALIFCSAIPFFQQIT 298
Query: 300 GINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQ 359
GIN I+FYAPVLF+++GF DA+L S+ +TG V ST +SI VD+ GRR L + GGIQ
Sbjct: 299 GINVIMFYAPVLFKTLGFGDDAALMSAVITGVVNMLSTFVSIYAVDRYGRRLLFLEGGIQ 358
Query: 360 MITCQVIVSIILGLKFGPNQE--LSKXXXXXXXXXXXXXXLAFGWSWGPLGWTVPSEIFP 417
M CQ++V +G +FG + L+ F WSWGPLGW VPSEI P
Sbjct: 359 MFICQLLVGSFIGARFGTSGTGTLTPATADWILAFICVYVAGFAWSWGPLGWLVPSEICP 418
Query: 418 LETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLPETK 477
LE R AGQ+I V+VN+FFTF+I Q FLT+LC KFG+F FFA V IMT+F+YF LPETK
Sbjct: 419 LEIRPAGQAINVSVNMFFTFLIGQFFLTMLCHMKFGLFYFFASMVAIMTVFIYFLLPETK 478
Query: 478 GVPIEEMILLWRKHWFWKRIMP 499
GVPIEEM +W++HWFWK+ +P
Sbjct: 479 GVPIEEMGRVWKQHWFWKKYIP 500
|
|
| TAIR|locus:2202044 STP1 "AT1G11260" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1403 (498.9 bits), Expect = 1.6e-143, P = 1.6e-143
Identities = 276/498 (55%), Positives = 349/498 (70%)
Query: 8 PAG--VAKERAEQYQGKVTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDV 65
PAG V + + Y GK+TP V+ C VAA+GG IFGYDIGISGGVTSM +FLK+FF V
Sbjct: 2 PAGGFVVGDGQKAYPGKLTPFVLFTCVVAAMGGLIFGYDIGISGGVTSMPSFLKRFFPSV 61
Query: 66 YLKKKH-AHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFX 124
Y K++ A N YC+YD+ L FTSSLYLA L++S VAS VTR +GRR S++ GGI F
Sbjct: 62 YRKQQEDASTNQYCQYDSPTLTMFTSSLYLAALISSLVASTVTRKFGRRLSMLFGGILFC 121
Query: 125 XXXXXXXXXXXXXXXXTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLG 184
GRILLG GIGF NQAVPLYLSEMAP RG LN+ FQL+ T+G
Sbjct: 122 AGALINGFAKHVWMLIVGRILLGFGIGFANQAVPLYLSEMAPYKYRGALNIGFQLSITIG 181
Query: 185 IFTANMINYGTQKLET-WGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRV 243
I A ++NY K++ WGWRLSLG A PAL++T+G ++LP+TPNS+IERG+ E +
Sbjct: 182 ILVAEVLNYFFAKIKGGWGWRLSLGGAVVPALIITIGSLVLPDTPNSMIERGQHEEAKTK 241
Query: 244 LEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINS 303
L +IRG +V+ E+ D+V AS+ + SI+HP+RN+L R+ RP L MA+ +P FQ LTGIN
Sbjct: 242 LRRIRGVDDVSQEFDDLVAASKESQSIEHPWRNLLRRKYRPHLTMAVMIPFFQQLTGINV 301
Query: 304 ILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITC 363
I+FYAPVLF ++GF DASL S+ +TG+V ++TL+SI VD+ GRR L + GG QM+ C
Sbjct: 302 IMFYAPVLFNTIGFTTDASLMSAVVTGSVNVAATLVSIYGVDRWGRRFLFLEGGTQMLIC 361
Query: 364 QVIVSIILGLKFGPNQ---ELSKXXXXXXXXXXXXXXLAFGWSWGPLGWTVPSEIFPLET 420
Q +V+ +G KFG + EL K F WSWGPLGW VPSEIFPLE
Sbjct: 362 QAVVAACIGAKFGVDGTPGELPKWYAIVVVTFICIYVAGFAWSWGPLGWLVPSEIFPLEI 421
Query: 421 RSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLPETKGVP 480
RSA QSITV+VN+ FTF+IAQIFLT+LC KFG+FL FA +V +M+IFVY FLPETKG+P
Sbjct: 422 RSAAQSITVSVNMIFTFIIAQIFLTMLCHLKFGLFLVFAFFVVVMSIFVYIFLPETKGIP 481
Query: 481 IEEMILLWRKHWFWKRIM 498
IEEM +WR HW+W R +
Sbjct: 482 IEEMGQVWRSHWYWSRFV 499
|
|
| TAIR|locus:2011957 STP9 "sugar transporter 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1384 (492.3 bits), Expect = 1.6e-141, P = 1.6e-141
Identities = 268/503 (53%), Positives = 344/503 (68%)
Query: 1 MAGGSLGPAGVAKERAEQYQGKVTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKK 60
MAGG+ G Y+G VT VI+ C VAA+GG +FGYD+GISGGVTSM+ FL K
Sbjct: 1 MAGGAFVSEGGGG--GNSYEGGVTVFVIMTCIVAAMGGLLFGYDLGISGGVTSMEEFLSK 58
Query: 61 FFHDVYLKKKHAH-ENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICG 119
FF +V + A E YCK+DNQ L FTSSLYLA L +SFVAS VTR YGR+ S+ G
Sbjct: 59 FFPEVDKQMHEARRETAYCKFDNQLLQLFTSSLYLAALASSFVASAVTRKYGRKISMFVG 118
Query: 120 GISFXXXXXXXXXXXXXXXXXTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQL 179
G++F GR+LLGVG+GF NQ+ P+YLSEMAP +RG LN+ FQ+
Sbjct: 119 GVAFLIGSLFNAFATNVAMLIVGRLLLGVGVGFANQSTPVYLSEMAPAKIRGALNIGFQM 178
Query: 180 ATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVE 239
A T+GI AN+INYGT ++ GWR+SLGLAA PA++M +G +LP+TPNS++ERGK +
Sbjct: 179 AITIGILIANLINYGTSQMAKNGWRVSLGLAAVPAVIMVIGSFVLPDTPNSMLERGKYEQ 238
Query: 240 GRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILER-RNRPQLVMAIFMPMFQIL 298
R +L+KIRG V+ E+QD+ DA E A + +P++NI ++ + RP LV +P FQ +
Sbjct: 239 AREMLQKIRGADNVDEEFQDLCDACEAAKKVDNPWKNIFQQAKYRPALVFCSAIPFFQQI 298
Query: 299 TGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGI 358
TGIN I+FYAPVLF+++GF DASL S+ +TGAV STL+SI VD+ GRR L + GGI
Sbjct: 299 TGINVIMFYAPVLFKTLGFADDASLISAVITGAVNVVSTLVSIYAVDRYGRRILFLEGGI 358
Query: 359 QMITCQVIVSIILGLKFGPNQE--LSKXXXXXXXXXXXXXXLAFGWSWGPLGWTVPSEIF 416
QMI Q++V ++G+KFG L+ F WSWGPLGW VPSEI
Sbjct: 359 QMIVSQIVVGTLIGMKFGTTGSGTLTPATADWILAFICLYVAGFAWSWGPLGWLVPSEIC 418
Query: 417 PLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLPET 476
PLE R AGQ+I V+VN+FFTF+I Q FLT+LC KFG+F FF G V +MT+F+YF LPET
Sbjct: 419 PLEIRPAGQAINVSVNMFFTFLIGQFFLTMLCHMKFGLFYFFGGMVAVMTVFIYFLLPET 478
Query: 477 KGVPIEEMILLWRKHWFWKRIMP 499
KGVPIEEM +W++H FWKR MP
Sbjct: 479 KGVPIEEMGRVWKQHPFWKRYMP 501
|
|
| TAIR|locus:2166781 STP11 "sugar transporter 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1384 (492.3 bits), Expect = 1.6e-141, P = 1.6e-141
Identities = 273/500 (54%), Positives = 343/500 (68%)
Query: 1 MAGGS-LGPAGVAKERAEQYQGKVTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLK 59
MAGG+ + +G Y+G+VT V++ C VAA+GG +FGYDIGISGGV SM+ FL
Sbjct: 1 MAGGAFIDESG----HGGDYEGRVTAFVMITCIVAAMGGLLFGYDIGISGGVISMEDFLT 56
Query: 60 KFFHDVY--LKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASII 117
KFF DV ++ K E YCKYDN+ L FTSSLYLA L ASF+AS +TR +GR+ S++
Sbjct: 57 KFFPDVLRQMQNKRGRETEYCKYDNELLTLFTSSLYLAALFASFLASTITRLFGRKVSMV 116
Query: 118 CGGISFXXXXXXXXXXXXXXXXXTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMF 177
G ++F GR+ LGVG+GF NQ+VPLYLSEMAP +RG LN+ F
Sbjct: 117 IGSLAFLSGALLNGLAINLEMLIIGRLFLGVGVGFANQSVPLYLSEMAPAKIRGALNIGF 176
Query: 178 QLATTLGIFTANMINYGTQKLETW-GWRLSLGLAAAPALMMTVGGILLPETPNSLIERGK 236
QLA T+GI AN++NY T KL+ GWRLSLGLA PA+MM VG LP+TPNS++ERG
Sbjct: 177 QLAITIGILAANIVNYVTPKLQNGIGWRLSLGLAGVPAVMMLVGCFFLPDTPNSILERGN 236
Query: 237 KVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQ 296
K + + +L+KIRGT EV E+ ++ +A E A +KHP+ NI++ R RPQL F+P FQ
Sbjct: 237 KEKAKEMLQKIRGTMEVEHEFNELCNACEAAKKVKHPWTNIMQARYRPQLTFCTFIPFFQ 296
Query: 297 ILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISG 356
LTGIN I+FYAPVLF+++GF DASL S+ +TG V ST++SI +VDK GRRAL + G
Sbjct: 297 QLTGINVIMFYAPVLFKTIGFGNDASLISAVITGLVNVLSTIVSIYSVDKFGRRALFLQG 356
Query: 357 GIQMITCQVIVSIILGLKFGPNQE--LSKXXXXXXXXXXXXXXLAFGWSWGPLGWTVPSE 414
G QMI Q+ V ++G KFG N E LS F WSWGPLGW VPSE
Sbjct: 357 GFQMIVTQIAVGSMIGWKFGFNGEGNLSGVDADIILALICLYVAGFAWSWGPLGWLVPSE 416
Query: 415 IFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLP 474
I PLE RSAGQS+ V+VN+FFTF I Q FLT+LC KFG+F FFAG V IMTIF+YF LP
Sbjct: 417 ICPLEIRSAGQSLNVSVNMFFTFFIGQFFLTMLCHMKFGLFYFFAGMVLIMTIFIYFLLP 476
Query: 475 ETKGVPIEEMILLWRKHWFW 494
ETKGVPIEEM +W++H +W
Sbjct: 477 ETKGVPIEEMGKVWKEHRYW 496
|
|
| TAIR|locus:2092286 STP4 "sugar transporter 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1371 (487.7 bits), Expect = 3.9e-140, P = 3.9e-140
Identities = 264/503 (52%), Positives = 341/503 (67%)
Query: 1 MAGGSLGPA-GVAKERAEQYQGKVTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLK 59
MAGG + GV Y K+TP V V CF+ A GG IFGYD+GISGGVTSM+ FL+
Sbjct: 1 MAGGFVSQTPGV-----RNYNYKLTPKVFVTCFIGAFGGLIFGYDLGISGGVTSMEPFLE 55
Query: 60 KFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICG 119
+FF VY K K AHEN YC++D+Q L FTSSLY+A LV+S AS +TR +GR+ S+ G
Sbjct: 56 EFFPYVYKKMKSAHENEYCRFDSQLLTLFTSSLYVAALVSSLFASTITRVFGRKWSMFLG 115
Query: 120 GISFXXXXXXXXXXXXXXXXXTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQL 179
G +F GRILLG G+GF NQ+VP+YLSEMAP +LRG N FQ+
Sbjct: 116 GFTFFIGSAFNGFAQNIAMLLIGRILLGFGVGFANQSVPVYLSEMAPPNLRGAFNNGFQV 175
Query: 180 ATTLGIFTANMINYGTQKLE-TWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKV 238
A GI A +INY T +++ GWR+SLGLA PA+M+ +G ++LP+TPNSLIERG
Sbjct: 176 AIIFGIVVATIINYFTAQMKGNIGWRISLGLACVPAVMIMIGALILPDTPNSLIERGYTE 235
Query: 239 EGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQIL 298
E + +L+ IRGT EV+ E+QD++DASE + +KHP++NI+ R RPQL+M F+P FQ L
Sbjct: 236 EAKEMLQSIRGTNEVDEEFQDLIDASEESKQVKHPWKNIMLPRYRPQLIMTCFIPFFQQL 295
Query: 299 TGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGI 358
TGIN I FYAPVLFQ++GF ASL S+ +TG + T +S+ TVD+ GRR L + GGI
Sbjct: 296 TGINVITFYAPVLFQTLGFGSKASLLSAMVTGIIELLCTFVSVFTVDRFGRRILFLQGGI 355
Query: 359 QMITCQVIVSIILGLKFGP--NQELSKXXXXXXXXXXXXXXLAFGWSWGPLGWTVPSEIF 416
QM+ Q+ + ++G+KFG + K F WSWGPLGW VPSEI
Sbjct: 356 QMLVSQIAIGAMIGVKFGVAGTGNIGKSDANLIVALICIYVAGFAWSWGPLGWLVPSEIS 415
Query: 417 PLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLPET 476
PLE RSA Q+I V+VN+FFTF++AQ+FLT+LC KFG+F FFA +V IMTIF+Y LPET
Sbjct: 416 PLEIRSAAQAINVSVNMFFTFLVAQLFLTMLCHMKFGLFFFFAFFVVIMTIFIYLMLPET 475
Query: 477 KGVPIEEMILLWRKHWFWKRIMP 499
K VPIEEM +W+ HWFW + +P
Sbjct: 476 KNVPIEEMNRVWKAHWFWGKFIP 498
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| TAIR|locus:2083003 STP6 "sugar transporter 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1308 (465.5 bits), Expect = 1.8e-133, P = 1.8e-133
Identities = 241/489 (49%), Positives = 329/489 (67%)
Query: 11 VAKERAEQYQGKVTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKK 70
V+ A ++ K+T V + +AA+GG IFGYDIGISGGV++MD FLK+FF V+ +KK
Sbjct: 5 VSNANAPAFEAKMTVYVFICVMIAAVGGLIFGYDIGISGGVSAMDDFLKEFFPAVWERKK 64
Query: 71 HAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFXXXXXXX 130
H HENNYCKYDNQ L FTSSLYLA LVASFVAS GRR ++ I F
Sbjct: 65 HVHENNYCKYDNQFLQLFTSSLYLAALVASFVASATCSKLGRRPTMQFASIFFLIGVGLT 124
Query: 131 XXXXXXXXXXTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANM 190
GR+ LG G+GFGNQAVPL+LSE+AP LRGGLN++FQL T+GI AN+
Sbjct: 125 AGAVNLVMLIIGRLFLGFGVGFGNQAVPLFLSEIAPAQLRGGLNIVFQLMVTIGILIANI 184
Query: 191 INYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGT 250
+NY T + +GWR++LG A PA+++ G +L+ ETP SLIER K EG+ L KIRG
Sbjct: 185 VNYFTATVHPYGWRIALGGAGIPAVILLFGSLLIIETPTSLIERNKNEEGKEALRKIRGV 244
Query: 251 KEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPV 310
++N EY+ +V A ++A+ +K P+R +L+ +RP ++ + + +FQ TGIN+I+FYAPV
Sbjct: 245 DDINDEYESIVHACDIASQVKDPYRKLLKPASRPPFIIGMLLQLFQQFTGINAIMFYAPV 304
Query: 311 LFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSII 370
LFQ++GF DA+L S+ +TG++ +T + I VD+ GRR LL+ + M+ CQ+I+ II
Sbjct: 305 LFQTVGFGSDAALLSAVITGSINVLATFVGIYLVDRTGRRFLLLQSSVHMLICQLIIGII 364
Query: 371 LGLKFGPNQELSKXXXXXXXXXXXXXXLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVA 430
L G L + + F WSWGPLGW +PSE FPLETRSAG ++ V+
Sbjct: 365 LAKDLGVTGTLGRPQALVVVIFVCVYVMGFAWSWGPLGWLIPSETFPLETRSAGFAVAVS 424
Query: 431 VNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLPETKGVPIEEMI-LLWR 489
N+FFTFVIAQ FL++LC + GIF FF+GW+ +M +F +FF+PETKG+ I++M +W+
Sbjct: 425 CNMFFTFVIAQAFLSMLCGMRSGIFFFFSGWIIVMGLFAFFFIPETKGIAIDDMRESVWK 484
Query: 490 KHWFWKRIM 498
HWFWKR M
Sbjct: 485 PHWFWKRYM 493
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| TAIR|locus:2179734 AT5G26250 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1301 (463.0 bits), Expect = 1.0e-132, P = 1.0e-132
Identities = 242/484 (50%), Positives = 325/484 (67%)
Query: 16 AEQYQGKVTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHEN 75
++ + K+T V + +AA+GG IFGYDIGISGGVT+MD FLK+FF VY +KKHAHEN
Sbjct: 11 SKSFDAKMTVYVFICVIIAAVGGLIFGYDIGISGGVTAMDDFLKEFFPSVYERKKHAHEN 70
Query: 76 NYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFXXXXXXXXXXXX 135
NYCKYDNQ L FTSSLYLA LVASF AS GRR ++ I F
Sbjct: 71 NYCKYDNQFLQLFTSSLYLAALVASFFASATCSKLGRRPTMQLASIFFLIGVGLAAGAVN 130
Query: 136 XXXXXTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGT 195
GRILLG G+GFGNQAVPL+LSE+AP LRGGLN++FQL T+GI AN++NY T
Sbjct: 131 IYMLIIGRILLGFGVGFGNQAVPLFLSEIAPARLRGGLNIVFQLMVTIGILIANIVNYFT 190
Query: 196 QKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNA 255
+ +GWR++LG A PAL++ G +L+ ETP SLIER K EG+ L+KIRG ++V+
Sbjct: 191 SSIHPYGWRIALGGAGIPALILLFGSLLICETPTSLIERNKTKEGKETLKKIRGVEDVDE 250
Query: 256 EYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSM 315
EY+ +V A ++A +K P+ +++ +RP V+ + + FQ TGIN+I+FYAPVLFQ++
Sbjct: 251 EYESIVHACDIARQVKDPYTKLMKPASRPPFVIGMLLQFFQQFTGINAIMFYAPVLFQTV 310
Query: 316 GFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKF 375
GF DA+L S+ +TG + ST + I VDK GRR LL+ + M+ CQ+++ IIL
Sbjct: 311 GFGNDAALLSAVVTGTINVLSTFVGIFLVDKTGRRFLLLQSSVHMLICQLVIGIILAKDL 370
Query: 376 GPNQELSKXXXXXXXXXXXXXXLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFF 435
L++ + F WSWGPLGW +PSE FPLETR+ G ++ V+ N+FF
Sbjct: 371 DVTGTLARPQALVVVIFVCVYVMGFAWSWGPLGWLIPSETFPLETRTEGFALAVSCNMFF 430
Query: 436 TFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLPETKGVPIEEMI-LLWRKHWFW 494
TFVIAQ FL++LC+ K GIF FF+GW+ +M +F FF+PETKGV I++M +W+ HW+W
Sbjct: 431 TFVIAQAFLSMLCAMKSGIFFFFSGWIVVMGLFALFFVPETKGVSIDDMRDSVWKLHWYW 490
Query: 495 KRIM 498
KR M
Sbjct: 491 KRFM 494
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| O04249 | STP7_ARATH | No assigned EC number | 0.8198 | 0.9824 | 0.9805 | yes | no |
| Q41144 | STC_RICCO | No assigned EC number | 0.5660 | 0.9707 | 0.9502 | N/A | no |
| P13181 | GAL2_YEAST | No assigned EC number | 0.3121 | 0.9355 | 0.8344 | yes | no |
| C0SPB2 | YWTG_BACSU | No assigned EC number | 0.3058 | 0.8144 | 0.9124 | yes | no |
| Q39524 | HUP2_PARKE | No assigned EC number | 0.5049 | 0.9628 | 0.9129 | N/A | no |
| Q10710 | STA_RICCO | No assigned EC number | 0.8447 | 0.9941 | 0.9750 | N/A | no |
| Q07423 | HEX6_RICCO | No assigned EC number | 0.5774 | 0.9609 | 0.9647 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | fgenesh1_pm.C_scaffold_6002815 | annotation not avaliable (515 aa) | |||||||||
(Arabidopsis lyrata) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | Al_scaffold_0003_483 | annotation not avaliable (221 aa) | • | 0.433 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 512 | |||
| pfam00083 | 449 | pfam00083, Sugar_tr, Sugar (and other) transporter | 1e-117 | |
| TIGR00879 | 481 | TIGR00879, SP, MFS transporter, sugar porter (SP) | 1e-108 | |
| PRK10077 | 479 | PRK10077, xylE, D-xylose transporter XylE; Provisi | 3e-59 | |
| TIGR00898 | 505 | TIGR00898, 2A0119, cation transport protein | 2e-14 | |
| cd06174 | 352 | cd06174, MFS, The Major Facilitator Superfamily (M | 2e-13 | |
| pfam07690 | 346 | pfam07690, MFS_1, Major Facilitator Superfamily | 1e-12 | |
| TIGR00883 | 394 | TIGR00883, 2A0106, metabolite-proton symporter | 1e-08 | |
| TIGR00895 | 398 | TIGR00895, 2A0115, benzoate transport | 5e-08 | |
| cd06174 | 352 | cd06174, MFS, The Major Facilitator Superfamily (M | 2e-07 | |
| TIGR00880 | 141 | TIGR00880, 2_A_01_02, Multidrug resistance protein | 4e-07 | |
| TIGR01299 | 742 | TIGR01299, synapt_SV2, synaptic vesicle protein SV | 8e-05 | |
| cd06174 | 352 | cd06174, MFS, The Major Facilitator Superfamily (M | 2e-04 | |
| TIGR00887 | 502 | TIGR00887, 2A0109, phosphate:H+ symporter | 2e-04 | |
| COG2814 | 394 | COG2814, AraJ, Arabinose efflux permease [Carbohyd | 5e-04 |
| >gnl|CDD|215702 pfam00083, Sugar_tr, Sugar (and other) transporter | Back alignment and domain information |
|---|
Score = 352 bits (905), Expect = e-117
Identities = 156/463 (33%), Positives = 244/463 (52%), Gaps = 20/463 (4%)
Query: 31 CFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTS 90
VAA+GG +FGYD G+ G ++ F K+F C S
Sbjct: 2 ALVAALGGFLFGYDTGVIGAFLTLIKFFKRFGALTS--------IGACAASTVLSGLIVS 53
Query: 91 SLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAA--ANLAMLLTGRILLGV 148
+ L+ S A + +GR+ S++ G + F++GA L A + ML+ GR+++G+
Sbjct: 54 IFSVGCLIGSLFAGKLGDRFGRKKSLLIGNVLFVIGALLQGFAKGKSFYMLIVGRVIVGL 113
Query: 149 GIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQK-LETWGWRLSL 207
G+G + VP+Y+SE+AP LRG L ++QL T GI A +I G K + GWR+ L
Sbjct: 114 GVGGISVLVPMYISEIAPKKLRGALGSLYQLGITFGILVAAIIGLGLNKYSNSDGWRIPL 173
Query: 208 GLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELA 267
GL PA+++ +G + LPE+P L+ +GK E R VL K+RG +V+ E Q+ D+ E +
Sbjct: 174 GLQFVPAILLLIGLLFLPESPRWLVLKGKLEEARAVLAKLRGVSDVDQEIQEEKDSLERS 233
Query: 268 NSIKHPFRNILERR--NRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYS 325
+ L R R +L+M + + +FQ LTGIN+I +Y+P +F+++G
Sbjct: 234 VEAEKASWLELFRGKTVRQRLLMGVMLQIFQQLTGINAIFYYSPTIFETLGLSDSL--LV 291
Query: 326 SAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSF 385
+ + G V T I+I VD+ GRR LL+ G M C +++ + L K
Sbjct: 292 TIIVGVVNFVFTFIAIFLVDRFGRRPLLLLGAAGMAICFLVLGVALLGVAKS-----KGA 346
Query: 386 SILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLT 445
I+ +V I LF+ F WGP+ W + SE+FPL R +I A N F+I +F
Sbjct: 347 GIVAIVFILLFIAFFALGWGPVPWVIVSELFPLGVRPKAMAIATAANWLANFLIGFLFPI 406
Query: 446 LLCSFKFGIFLFFAGWVTIMTIFVYFFLPETKGVPIEEMILLW 488
+ + +FL FAG + + +FV+FF+PETKG +EE+ L+
Sbjct: 407 ITGAIGGYVFLVFAGLLVLFILFVFFFVPETKGRTLEEIDELF 449
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Length = 449 |
| >gnl|CDD|233165 TIGR00879, SP, MFS transporter, sugar porter (SP) family | Back alignment and domain information |
|---|
Score = 330 bits (849), Expect = e-108
Identities = 173/478 (36%), Positives = 253/478 (52%), Gaps = 26/478 (5%)
Query: 19 YQGKVTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYC 78
G V + +AAIGG +FGYD G+ GG ++ AF KF N
Sbjct: 18 GLGSTYWKVALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKF-----------TSANSD 66
Query: 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAAN--- 135
Y + S + G + + A ++ +GR+ S++ + F++GA L AA
Sbjct: 67 SYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALS 126
Query: 136 LAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGT 195
+ ML+ GR+LLG+G+G + VP+YLSE+AP LRG L ++QLA T GI A G
Sbjct: 127 VEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGK 186
Query: 196 QKLE-TWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVN 254
L T GWR+ LGL PA ++ +G LPE+P L+ +G+ E R+ L ++RGT +
Sbjct: 187 VSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGED 246
Query: 255 AEYQDMVDASELANSIKHPFRNI-------LERRNRPQLVMAIFMPMFQILTGINSILFY 307
E D ++ ++ SI+ RR R +L + + + FQ TGIN+I++Y
Sbjct: 247 KELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYY 306
Query: 308 APVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIV 367
+P +F++ G D + S + GAV + T ++I VD+ GRR LL+ G M C ++
Sbjct: 307 SPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVL 366
Query: 368 SIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSI 427
I LG F SKS + +V I LF+ F WGP+ W + SEIFPL R G SI
Sbjct: 367 GI-LGASFVT--GSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISI 423
Query: 428 TVAVNLFFTFVIAQIFLTLLCSFKFG-IFLFFAGWVTIMTIFVYFFLPETKGVPIEEM 484
VA N F++ +F T+L S G +F+FF G + IFVYFFLPETKG +EE+
Sbjct: 424 AVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPETKGRTLEEI 481
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This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083) [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 481 |
| >gnl|CDD|182225 PRK10077, xylE, D-xylose transporter XylE; Provisional | Back alignment and domain information |
|---|
Score = 202 bits (516), Expect = 3e-59
Identities = 136/487 (27%), Positives = 220/487 (45%), Gaps = 55/487 (11%)
Query: 32 FVAAIGGSIFGYDIG-ISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTS 90
VA +GG +FGYD ISG V S++ ++ ++ E+ N L F
Sbjct: 15 LVATLGGLLFGYDTAVISGTVESLNTV--------FVAPQNLSES----AAN-SLLGFCV 61
Query: 91 SLYLAG-LVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTG------- 142
+ L G ++ + + +GRR S+ + F + +AL +A G
Sbjct: 62 ASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFI-SALGSAWPEFGFTSIGPDNTGYV 120
Query: 143 ------RILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQ 196
RI+ G+G+G + P+Y++E+AP H+RG L Q A G +NY
Sbjct: 121 PEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIA 180
Query: 197 K------LETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGT 250
+ L T GWR A PAL+ + +PETP L+ RGK+ + +L KI G
Sbjct: 181 RSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGN 240
Query: 251 KEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPV 310
Q++ + + L +V+ + + +FQ GIN +L+YAP
Sbjct: 241 TLATQALQEIKHSLDHGRKTGGK----LLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPE 296
Query: 311 LFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSII 370
+F+++G D +L + + G + + T+++I TVDK GR+ L I G + M I
Sbjct: 297 IFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGM----AIGMFS 352
Query: 371 LGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVA 430
LG F I+ ++ + +V AF SWGP+ W + SEIFP R +I VA
Sbjct: 353 LGTAFYTQAP-----GIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVA 407
Query: 431 VNLFFTFVIAQIF------LTLLCSFKFGIFLFFAGWVTIMT-IFVYFFLPETKGVPIEE 483
+ ++ F L+ F G + G + ++ +F++ F+PETKG +EE
Sbjct: 408 AQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEE 467
Query: 484 MILLWRK 490
M LW
Sbjct: 468 MEALWEP 474
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Length = 479 |
| >gnl|CDD|233176 TIGR00898, 2A0119, cation transport protein | Back alignment and domain information |
|---|
Score = 75.4 bits (186), Expect = 2e-14
Identities = 91/407 (22%), Positives = 167/407 (41%), Gaps = 32/407 (7%)
Query: 82 NQGLAAFTSSLYLAG-LVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLL 140
+ T S + G L+ SFV ++ +GR+ ++ + + L A + N + L
Sbjct: 125 DAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFL 184
Query: 141 TGRILLGVGI-GFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLE 199
R+L+G+GI G QAV L E P R + + Q+ +LG+ ++ Y
Sbjct: 185 VFRLLVGMGIGGIWVQAVVLNT-EFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP--- 240
Query: 200 TWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGT--KEVNAEY 257
WR + P + + +PE+P LI +G+ E ++L++I K++ AE
Sbjct: 241 --DWRWLQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEV 298
Query: 258 QDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGF 317
+ +L++S K L R P L M T + +Y VL
Sbjct: 299 LSLSLEKDLSSSKKQYSFLDLFRT--PNLRKTTLCLMMLWFT--TAFSYYGLVLDLG--- 351
Query: 318 KGDASLY-SSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFG 376
++Y ++G V + LI++ +D+LGRR M ++ + L L
Sbjct: 352 NLGGNIYLDLFISGLVELPAKLITLLLIDRLGRR-------YTMAASLLLAGVALLLLLF 404
Query: 377 PNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFT 436
+L F + V+ F + + + + +E++P R+ G + + +
Sbjct: 405 VPVDLY--FLRTALAVLGKFGITSAFQ---MVYLYTAELYPTVVRNLGVGVCSTMARVGS 459
Query: 437 FVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLPETKGVPIEE 483
+ + + LF G + ++ + FLPETKGVP+ E
Sbjct: 460 IISPFLVYLGEKWLFLPLVLF--GGLALLAGILTLFLPETKGVPLPE 504
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[Transport and binding proteins, Cations and iron carrying compounds]. Length = 505 |
| >gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters | Back alignment and domain information |
|---|
Score = 70.8 bits (174), Expect = 2e-13
Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 2/141 (1%)
Query: 85 LAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRI 144
S+ L + S +A ++ +GRR ++ G + F LG+ L A A++L +LL GR
Sbjct: 36 AGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRF 95
Query: 145 LLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWR 204
LLG+G G A ++E P RG +F LG ++ E+ GWR
Sbjct: 96 LLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLL--AESLGWR 153
Query: 205 LSLGLAAAPALMMTVGGILLP 225
+ A L++ + + L
Sbjct: 154 WLFLILAILGLLLALLLLFLL 174
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MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated. Length = 352 |
| >gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily | Back alignment and domain information |
|---|
Score = 68.6 bits (168), Expect = 1e-12
Identities = 65/344 (18%), Positives = 126/344 (36%), Gaps = 43/344 (12%)
Query: 89 TSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGV 148
++ L +A +A ++ +GRR ++ G + F LG L A++L +LL R+L G+
Sbjct: 38 LTAFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLLFASSLWLLLVLRVLQGL 97
Query: 149 GIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLG 208
G G A +++ P RG + LG ++ G +GWR +
Sbjct: 98 GGGALFPAAAALIADWFPPEERGRALGLLSAGFGLGAALGPLL--GGLLASLFGWRAAFL 155
Query: 209 LAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELAN 268
+ A AL+ V LL P +R K E
Sbjct: 156 ILAILALLAAVLAALLLPRPPPESKRPKPAEEAPA------------------------- 190
Query: 269 SIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAM 328
+ ++ +L V+ + + + ++L Y P+ + +G + +
Sbjct: 191 PLVPAWKLLLRDP-----VLWLLLALLLFGFAFFALLTYLPLYQEVLGLSALLAGLLLGL 245
Query: 329 TGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSIL 388
G + A L+ D+LGRR L+ + +I + ++++ S+
Sbjct: 246 AGLLGAIGRLLLGRLSDRLGRRRRLLLALLLLILAALGLALLSLT----------ESSLW 295
Query: 389 VVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVN 432
++V + L G + L + S++ P E R +
Sbjct: 296 LLVALLLLGFGAGLVFPAL-NALVSDLAPKEERGTASGLYNTAG 338
|
Length = 346 |
| >gnl|CDD|233168 TIGR00883, 2A0106, metabolite-proton symporter | Back alignment and domain information |
|---|
Score = 56.9 bits (138), Expect = 1e-08
Identities = 73/355 (20%), Positives = 130/355 (36%), Gaps = 59/355 (16%)
Query: 110 YGRRAS-----IICGGISFLLGAALNAAAANLA---MLLTGRILLGVGIGFGNQAVPLYL 161
GR+ + ++ G + L+G + A + +LL R++ G +G LYL
Sbjct: 62 IGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYL 121
Query: 162 SEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLET------WGWRLSLGLAAAPAL 215
+E AP RG Q+ +G+ A + L WGWR+ ++A L
Sbjct: 122 AEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVL 181
Query: 216 MMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFR 275
+ L ETP + K + R P
Sbjct: 182 IGLYLRRNLEETPVFEKAQEKHKKKRG------------------------------PIA 211
Query: 276 NILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLAS 335
L ++R ++ + + + T + L Q++G +++L ++ +
Sbjct: 212 ETL-TKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFI 270
Query: 336 STLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICL 395
+ +S A D++GRR +LI + V + + L L L ++
Sbjct: 271 TIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMAL---------LDSGSFTLFFFLVLG 321
Query: 396 FVLAFGWSWGPLGWTVPSEIFPLETRSAGQSIT--VAVNLF--FTFVIAQIFLTL 446
L G GP+G +P E+FP E R G S+ +A +F F IA + +
Sbjct: 322 MALIGGMYTGPMGSFLP-ELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAM 375
|
This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc [Transport and binding proteins, Unknown substrate]. Length = 394 |
| >gnl|CDD|233175 TIGR00895, 2A0115, benzoate transport | Back alignment and domain information |
|---|
Score = 54.7 bits (132), Expect = 5e-08
Identities = 55/276 (19%), Positives = 104/276 (37%), Gaps = 17/276 (6%)
Query: 86 AAFTSSLYLAGLVA-SFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRI 144
F S L G+ + P+ GRR ++ + F + L A A N+ LL R
Sbjct: 54 LGFLFSAGLIGMAFGALFFGPLADRIGRRRVLLWSILLFSVFTLLCALATNVTQLLILRF 113
Query: 145 LLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWR 204
L G+G+G + +SE AP RG + +G + + +GWR
Sbjct: 114 LAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFL--AGWLIPVFGWR 171
Query: 205 LSLGLAA-APALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDA 263
+ AP L++ + LPE+ + L+ + + RR++ I + A+ + +
Sbjct: 172 SLFYVGGIAPLLLLLLLMRFLPESIDFLVSK-RPETVRRIVNAIAPQMQAEAQ-SALPEQ 229
Query: 264 SELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYA-----PVLFQSMGFK 318
+ + F+ + + + A + +L + + Y P L +GF
Sbjct: 230 KATQGTKRSVFKALFQGK------TARITVLLWLLYFMLLVGVYFLTNWLPKLMVELGFS 283
Query: 319 GDASLYSSAMTGAVLASSTLISIATVDKLGRRALLI 354
+ A+ ++I D+LG R +
Sbjct: 284 LSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTAL 319
|
[Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 398 |
| >gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters | Back alignment and domain information |
|---|
Score = 52.7 bits (127), Expect = 2e-07
Identities = 37/191 (19%), Positives = 75/191 (39%), Gaps = 15/191 (7%)
Query: 284 PQLVMAIFMPMFQILTGINSILFYAPVLFQSM-GFKGDASLYSSAMTGAVLASSTLISIA 342
+L++ + + F + G +L Y P+ Q + G + ++ G L+
Sbjct: 174 LRLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGL 233
Query: 343 TVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGW 402
D+LGRR LL+ G+ ++ ++ L L L+ + S+ +++V L +
Sbjct: 234 LSDRLGRRRLLLLIGL------LLAALGLLL-------LALAPSLALLLVALLLLGFGLG 280
Query: 403 SWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKF-GIFLFFAGW 461
P T+ SE+ P E R + + + LL + + G+FL A
Sbjct: 281 FAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAAL 340
Query: 462 VTIMTIFVYFF 472
+ + +
Sbjct: 341 ALLAALLLLLL 351
|
MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated. Length = 352 |
| >gnl|CDD|233166 TIGR00880, 2_A_01_02, Multidrug resistance protein | Back alignment and domain information |
|---|
Score = 48.8 bits (117), Expect = 4e-07
Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 8/143 (5%)
Query: 91 SLYLAG-----LVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRIL 145
L LAG L+ S ++ +T +GR+ ++ G F+L A+ A ++N+ +L+ R L
Sbjct: 1 GLLLAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFL 60
Query: 146 LGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWR- 204
G G F A ++++ P RG + LG + G + GWR
Sbjct: 61 QGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPL--GGVLAQFLGWRA 118
Query: 205 LSLGLAAAPALMMTVGGILLPET 227
L LA + LLPET
Sbjct: 119 PFLFLAILALAAFILLAFLLPET 141
|
Length = 141 |
| >gnl|CDD|130366 TIGR01299, synapt_SV2, synaptic vesicle protein SV2 | Back alignment and domain information |
|---|
Score = 45.0 bits (106), Expect = 8e-05
Identities = 43/184 (23%), Positives = 68/184 (36%), Gaps = 19/184 (10%)
Query: 82 NQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASI-ICGGISFLLGAALNAAAANLAMLL 140
+ G +YL +V +F + GR+ + IC ++ A ++ L
Sbjct: 201 DSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFF-AFFSSFVQGYGFFL 259
Query: 141 TGRILLGVGIGFGNQAVPLYLSEMAPTHLRG-GLNMMFQLATTLGIFTANMINYGTQKLE 199
R+L G GIG V Y +E RG L+ + GI+ A M +
Sbjct: 260 FCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAM---AWAIIP 316
Query: 200 TWGWRLSLGLA-------------AAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEK 246
+GW +G A A P + +PE+P +E GK E +L+
Sbjct: 317 HYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKL 376
Query: 247 IRGT 250
I T
Sbjct: 377 IHDT 380
|
This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by PFAM model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices. Length = 742 |
| >gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 2e-04
Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 3/147 (2%)
Query: 80 YDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFL-LGAALNAAAANLAM 138
S L G++ + + ++ GRR ++ G+ LG L A A +LA+
Sbjct: 208 LSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLAL 267
Query: 139 LLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKL 198
LL +LLG G+GF A+ SE+AP RG + +F +LG ++ L
Sbjct: 268 LLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLL--AGLLL 325
Query: 199 ETWGWRLSLGLAAAPALMMTVGGILLP 225
+T G+ + AA AL+ + +LLP
Sbjct: 326 DTGGYGGVFLILAALALLAALLLLLLP 352
|
MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated. Length = 352 |
| >gnl|CDD|129965 TIGR00887, 2A0109, phosphate:H+ symporter | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 2e-04
Identities = 93/433 (21%), Positives = 151/433 (34%), Gaps = 91/433 (21%)
Query: 116 IICGGISFLLGAALNAAAANLAMLLTG-RILLGVGIGFGNQAVPLYLSEMAPTHLRG--- 171
II + G + ++ ++ L R LGVGIG + SE A RG
Sbjct: 94 IIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMM 153
Query: 172 --------------GLNMMFQLATTLGIFTANMINYG------TQKLETWGWRLSLGLAA 211
+ + LA + WR+ +G A
Sbjct: 154 AAVFAMQGFGILAGAIVALIVLAGFKHSL--EAAADEASCTGSCVPAVDYMWRILIGFGA 211
Query: 212 APALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIK 271
PAL+ + +PETP + K VE ++ AE ++ AS K
Sbjct: 212 VPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPK 271
Query: 272 HP----FRNILERRNRPQLVMAIFMPMFQILTGINS------ILFYAPVLFQS-----MG 316
F + + R+ + L G I FY L Q +G
Sbjct: 272 ASWSDFFTHFFKWRH------------GKHLLGTAGSWFLLDIAFYGVNLNQKVILSAIG 319
Query: 317 FKGDAS-------LYSSAMTGAVLA-SSTL----ISIATVDKLGRRALLISGGIQMITCQ 364
+ A+ LY +A+ ++A + T+ +++ VD +GR+ + + G +
Sbjct: 320 YSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFIL---- 375
Query: 365 VIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWT--VPSEIFPLETRS 422
++ +LG LS L + V+ F FG P T VP E+FP RS
Sbjct: 376 TVLFFVLG---FAYNHLSTH-GFLAIYVLAQFFANFG----PNATTFIVPGEVFPTRYRS 427
Query: 423 AGQSITVAVNLFFTFVIAQIFLTLLCS------FKFGIFL-----FFAGWVTIMTIFVYF 471
I+ A + FL L + GI++ FA ++ + I
Sbjct: 428 TAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFM-FLGILFTL 486
Query: 472 FLPETKGVPIEEM 484
+PETKG +EE+
Sbjct: 487 LIPETKGKSLEEL 499
|
This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083) [Transport and binding proteins, Anions]. Length = 502 |
| >gnl|CDD|225371 COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 5e-04
Identities = 68/354 (19%), Positives = 115/354 (32%), Gaps = 64/354 (18%)
Query: 84 GLAAFTSSLY-LAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTG 142
G A + Y L + + + + +T RR ++ F++ L+A A + A+LL
Sbjct: 48 GAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLA 107
Query: 143 RILLGVGIGFGNQAVPLYLSEMAPTHLRGG----LNMMFQLATTLGIFTANMINYGTQKL 198
R L G+ G + + P RG + LAT LG + GT
Sbjct: 108 RALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLG------VPLGTFLG 161
Query: 199 ETWGWRLSLGLAAAPALM-MTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEY 257
+ +GWR + A AL+ + + LLP
Sbjct: 162 QLFGWRATFLAIAVLALLALLLLWKLLPP------------------------------- 190
Query: 258 QDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGF 317
SE++ S+ P R +L RP +++ + + + P L GF
Sbjct: 191 ------SEISGSLPGPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGF 244
Query: 318 KGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGP 377
A G L+ D+ RRAL+ + + + +L L F
Sbjct: 245 SVSAVSLVLLAFGIAGFIGNLLGGRLADRGPRRALIAALLLLAL-------ALLALTFTG 297
Query: 378 NQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAV 431
+ + LF+ F +S G + S+ VA
Sbjct: 298 AS--------PALALALLFLWGFAFSPALQGLQTRLARLAPDAADLAGSLNVAA 343
|
Length = 394 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 512 | |||
| KOG0569 | 485 | consensus Permease of the major facilitator superf | 100.0 | |
| PRK10077 | 479 | xylE D-xylose transporter XylE; Provisional | 100.0 | |
| TIGR00887 | 502 | 2A0109 phosphate:H+ symporter. This model represen | 100.0 | |
| TIGR01299 | 742 | synapt_SV2 synaptic vesicle protein SV2. This mode | 100.0 | |
| KOG0254 | 513 | consensus Predicted transporter (major facilitator | 100.0 | |
| TIGR00879 | 481 | SP MFS transporter, sugar porter (SP) family. This | 100.0 | |
| PRK10642 | 490 | proline/glycine betaine transporter; Provisional | 100.0 | |
| COG2271 | 448 | UhpC Sugar phosphate permease [Carbohydrate transp | 100.0 | |
| COG2814 | 394 | AraJ Arabinose efflux permease [Carbohydrate trans | 100.0 | |
| TIGR00898 | 505 | 2A0119 cation transport protein. | 100.0 | |
| PF00083 | 451 | Sugar_tr: Sugar (and other) transporter; InterPro: | 100.0 | |
| PRK10406 | 432 | alpha-ketoglutarate transporter; Provisional | 100.0 | |
| PRK11551 | 406 | putative 3-hydroxyphenylpropionic transporter MhpT | 100.0 | |
| PRK09952 | 438 | shikimate transporter; Provisional | 100.0 | |
| PRK12307 | 426 | putative sialic acid transporter; Provisional | 100.0 | |
| TIGR02332 | 412 | HpaX 4-hydroxyphenylacetate permease. This protein | 100.0 | |
| TIGR00891 | 405 | 2A0112 putative sialic acid transporter. | 100.0 | |
| PRK09556 | 467 | uhpT sugar phosphate antiporter; Reviewed | 100.0 | |
| PRK11663 | 434 | regulatory protein UhpC; Provisional | 100.0 | |
| PRK03545 | 390 | putative arabinose transporter; Provisional | 100.0 | |
| KOG0253 | 528 | consensus Synaptic vesicle transporter SV2 (major | 100.0 | |
| KOG0252 | 538 | consensus Inorganic phosphate transporter [Inorgan | 100.0 | |
| PRK03893 | 496 | putative sialic acid transporter; Provisional | 100.0 | |
| PRK15075 | 434 | citrate-proton symporter; Provisional | 100.0 | |
| PRK09705 | 393 | cynX putative cyanate transporter; Provisional | 100.0 | |
| PRK14995 | 495 | methyl viologen resistance protein SmvA; Provision | 100.0 | |
| TIGR00903 | 368 | 2A0129 major facilitator 4 family protein. This fa | 100.0 | |
| TIGR00895 | 398 | 2A0115 benzoate transport. | 100.0 | |
| PRK10213 | 394 | nepI ribonucleoside transporter; Reviewed | 100.0 | |
| TIGR00890 | 377 | 2A0111 Oxalate/Formate Antiporter. | 100.0 | |
| PRK11273 | 452 | glpT sn-glycerol-3-phosphate transporter; Provisio | 100.0 | |
| PLN00028 | 476 | nitrate transmembrane transporter; Provisional | 100.0 | |
| PRK10091 | 382 | MFS transport protein AraJ; Provisional | 100.0 | |
| TIGR00892 | 455 | 2A0113 monocarboxylate transporter 1. | 100.0 | |
| TIGR00893 | 399 | 2A0114 d-galactonate transporter. | 100.0 | |
| PRK05122 | 399 | major facilitator superfamily transporter; Provisi | 100.0 | |
| PRK03699 | 394 | putative transporter; Provisional | 100.0 | |
| TIGR00894 | 465 | 2A0114euk Na(+)-dependent inorganic phosphate cotr | 100.0 | |
| PRK15402 | 406 | multidrug efflux system translocase MdfA; Provisio | 100.0 | |
| KOG0255 | 521 | consensus Synaptic vesicle transporter SVOP and re | 100.0 | |
| PRK15034 | 462 | nitrate/nitrite transport protein NarU; Provisiona | 100.0 | |
| PRK10504 | 471 | putative transporter; Provisional | 100.0 | |
| TIGR00711 | 485 | efflux_EmrB drug resistance transporter, EmrB/QacA | 100.0 | |
| PRK10489 | 417 | enterobactin exporter EntS; Provisional | 100.0 | |
| PRK03633 | 381 | putative MFS family transporter protein; Provision | 100.0 | |
| PRK12382 | 392 | putative transporter; Provisional | 100.0 | |
| COG2223 | 417 | NarK Nitrate/nitrite transporter [Inorganic ion tr | 100.0 | |
| TIGR00710 | 385 | efflux_Bcr_CflA drug resistance transporter, Bcr/C | 100.0 | |
| TIGR00883 | 394 | 2A0106 metabolite-proton symporter. This model rep | 100.0 | |
| TIGR00900 | 365 | 2A0121 H+ Antiporter protein. | 100.0 | |
| KOG2532 | 466 | consensus Permease of the major facilitator superf | 100.0 | |
| TIGR00712 | 438 | glpT glycerol-3-phosphate transporter. This model | 100.0 | |
| PRK15403 | 413 | multidrug efflux system protein MdtM; Provisional | 100.0 | |
| KOG1330 | 493 | consensus Sugar transporter/spinster transmembrane | 100.0 | |
| TIGR00897 | 402 | 2A0118 polyol permease family. This family of prot | 100.0 | |
| TIGR00881 | 379 | 2A0104 phosphoglycerate transporter family protein | 100.0 | |
| PRK09874 | 408 | drug efflux system protein MdtG; Provisional | 100.0 | |
| TIGR00899 | 375 | 2A0120 sugar efflux transporter. This family of pr | 100.0 | |
| PRK11043 | 401 | putative transporter; Provisional | 100.0 | |
| cd06174 | 352 | MFS The Major Facilitator Superfamily (MFS) is a l | 100.0 | |
| PRK10133 | 438 | L-fucose transporter; Provisional | 100.0 | |
| PF07690 | 352 | MFS_1: Major Facilitator Superfamily; InterPro: IP | 99.98 | |
| PRK10473 | 392 | multidrug efflux system protein MdtL; Provisional | 99.98 | |
| PRK11010 | 491 | ampG muropeptide transporter; Validated | 99.97 | |
| PRK11102 | 377 | bicyclomycin/multidrug efflux system; Provisional | 99.97 | |
| KOG2533 | 495 | consensus Permease of the major facilitator superf | 99.97 | |
| PRK15011 | 393 | sugar efflux transporter B; Provisional | 99.97 | |
| PRK11195 | 393 | lysophospholipid transporter LplT; Provisional | 99.97 | |
| PRK11646 | 400 | multidrug resistance protein MdtH; Provisional | 99.97 | |
| TIGR00885 | 410 | fucP L-fucose:H+ symporter permease. This family d | 99.97 | |
| PRK11652 | 394 | emrD multidrug resistance protein D; Provisional | 99.97 | |
| PRK10054 | 395 | putative transporter; Provisional | 99.97 | |
| TIGR00896 | 355 | CynX cyanate transporter. This family of proteins | 99.97 | |
| TIGR00902 | 382 | 2A0127 phenyl proprionate permease family protein. | 99.97 | |
| TIGR00886 | 366 | 2A0108 nitrite extrusion protein (nitrite facilita | 99.97 | |
| PRK11128 | 382 | putative 3-phenylpropionic acid transporter; Provi | 99.96 | |
| PRK11902 | 402 | ampG muropeptide transporter; Reviewed | 99.96 | |
| TIGR00889 | 418 | 2A0110 nucleoside transporter. This family of prot | 99.96 | |
| KOG2504 | 509 | consensus Monocarboxylate transporter [Carbohydrat | 99.96 | |
| PF06609 | 599 | TRI12: Fungal trichothecene efflux pump (TRI12); I | 99.96 | |
| PRK09528 | 420 | lacY galactoside permease; Reviewed | 99.95 | |
| KOG2615 | 451 | consensus Permease of the major facilitator superf | 99.95 | |
| PF05977 | 524 | MFS_3: Transmembrane secretion effector; InterPro: | 99.95 | |
| PRK06814 | 1140 | acylglycerophosphoethanolamine acyltransferase; Pr | 99.95 | |
| TIGR00901 | 356 | 2A0125 AmpG-related permease. | 99.95 | |
| TIGR00805 | 633 | oat sodium-independent organic anion transporter. | 99.95 | |
| KOG3764 | 464 | consensus Vesicular amine transporter [Intracellul | 99.95 | |
| PRK08633 | 1146 | 2-acyl-glycerophospho-ethanolamine acyltransferase | 99.95 | |
| COG2807 | 395 | CynX Cyanate permease [Inorganic ion transport and | 99.95 | |
| TIGR00792 | 437 | gph sugar (Glycoside-Pentoside-Hexuronide) transpo | 99.95 | |
| TIGR00882 | 396 | 2A0105 oligosaccharide:H+ symporter. | 99.95 | |
| COG0738 | 422 | FucP Fucose permease [Carbohydrate transport and m | 99.94 | |
| PTZ00207 | 591 | hypothetical protein; Provisional | 99.94 | |
| TIGR00806 | 511 | rfc RFC reduced folate carrier. Proteins of the RF | 99.94 | |
| TIGR00924 | 475 | yjdL_sub1_fam amino acid/peptide transporter (Pept | 99.94 | |
| TIGR02718 | 390 | sider_RhtX_FptX siderophore transporter, RhtX/FptX | 99.93 | |
| PRK10207 | 489 | dipeptide/tripeptide permease B; Provisional | 99.93 | |
| TIGR01301 | 477 | GPH_sucrose GPH family sucrose/H+ symporter. This | 99.91 | |
| PF03825 | 400 | Nuc_H_symport: Nucleoside H+ symporter | 99.9 | |
| PRK10429 | 473 | melibiose:sodium symporter; Provisional | 99.9 | |
| PRK09584 | 500 | tppB putative tripeptide transporter permease; Rev | 99.9 | |
| KOG4686 | 459 | consensus Predicted sugar transporter [Carbohydrat | 99.9 | |
| PRK09669 | 444 | putative symporter YagG; Provisional | 99.89 | |
| TIGR00788 | 468 | fbt folate/biopterin transporter. The only functio | 99.88 | |
| KOG2563 | 480 | consensus Permease of the major facilitator superf | 99.88 | |
| COG2211 | 467 | MelB Na+/melibiose symporter and related transport | 99.88 | |
| PF11700 | 477 | ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 | 99.87 | |
| PRK09848 | 448 | glucuronide transporter; Provisional | 99.87 | |
| PRK11462 | 460 | putative transporter; Provisional | 99.86 | |
| PF13347 | 428 | MFS_2: MFS/sugar transport protein | 99.86 | |
| PRK15462 | 493 | dipeptide/tripeptide permease D; Provisional | 99.85 | |
| TIGR01272 | 310 | gluP glucose/galactose transporter. Disruption of | 99.83 | |
| COG2270 | 438 | Permeases of the major facilitator superfamily [Ge | 99.83 | |
| PF01306 | 412 | LacY_symp: LacY proton/sugar symporter; InterPro: | 99.81 | |
| KOG2325 | 488 | consensus Predicted transporter/transmembrane prot | 99.79 | |
| COG3104 | 498 | PTR2 Dipeptide/tripeptide permease [Amino acid tra | 99.76 | |
| PF03209 | 403 | PUCC: PUCC protein; InterPro: IPR004896 This prote | 99.72 | |
| KOG3626 | 735 | consensus Organic anion transporter [Secondary met | 99.71 | |
| PRK10642 | 490 | proline/glycine betaine transporter; Provisional | 99.71 | |
| PF03137 | 539 | OATP: Organic Anion Transporter Polypeptide (OATP) | 99.65 | |
| TIGR00880 | 141 | 2_A_01_02 Multidrug resistance protein. | 99.62 | |
| KOG2816 | 463 | consensus Predicted transporter ADD1 (major facili | 99.62 | |
| PF05631 | 354 | DUF791: Protein of unknown function (DUF791); Inte | 99.55 | |
| PF03092 | 433 | BT1: BT1 family; InterPro: IPR004324 Members of th | 99.54 | |
| PRK15011 | 393 | sugar efflux transporter B; Provisional | 99.5 | |
| PRK09528 | 420 | lacY galactoside permease; Reviewed | 99.48 | |
| TIGR00895 | 398 | 2A0115 benzoate transport. | 99.47 | |
| TIGR00890 | 377 | 2A0111 Oxalate/Formate Antiporter. | 99.45 | |
| TIGR00891 | 405 | 2A0112 putative sialic acid transporter. | 99.45 | |
| cd06174 | 352 | MFS The Major Facilitator Superfamily (MFS) is a l | 99.45 | |
| TIGR00889 | 418 | 2A0110 nucleoside transporter. This family of prot | 99.44 | |
| TIGR01299 | 742 | synapt_SV2 synaptic vesicle protein SV2. This mode | 99.43 | |
| PRK05122 | 399 | major facilitator superfamily transporter; Provisi | 99.43 | |
| TIGR02332 | 412 | HpaX 4-hydroxyphenylacetate permease. This protein | 99.42 | |
| COG2271 | 448 | UhpC Sugar phosphate permease [Carbohydrate transp | 99.42 | |
| PRK12382 | 392 | putative transporter; Provisional | 99.42 | |
| PRK11663 | 434 | regulatory protein UhpC; Provisional | 99.41 | |
| PRK10054 | 395 | putative transporter; Provisional | 99.41 | |
| PF01770 | 412 | Folate_carrier: Reduced folate carrier; InterPro: | 99.41 | |
| TIGR00899 | 375 | 2A0120 sugar efflux transporter. This family of pr | 99.4 | |
| TIGR00893 | 399 | 2A0114 d-galactonate transporter. | 99.4 | |
| PRK11551 | 406 | putative 3-hydroxyphenylpropionic transporter MhpT | 99.39 | |
| TIGR00892 | 455 | 2A0113 monocarboxylate transporter 1. | 99.37 | |
| PRK15462 | 493 | dipeptide/tripeptide permease D; Provisional | 99.36 | |
| TIGR00902 | 382 | 2A0127 phenyl proprionate permease family protein. | 99.35 | |
| TIGR00710 | 385 | efflux_Bcr_CflA drug resistance transporter, Bcr/C | 99.35 | |
| TIGR00900 | 365 | 2A0121 H+ Antiporter protein. | 99.35 | |
| PRK10213 | 394 | nepI ribonucleoside transporter; Reviewed | 99.34 | |
| PRK03545 | 390 | putative arabinose transporter; Provisional | 99.34 | |
| PRK09874 | 408 | drug efflux system protein MdtG; Provisional | 99.34 | |
| PRK03699 | 394 | putative transporter; Provisional | 99.34 | |
| PRK12307 | 426 | putative sialic acid transporter; Provisional | 99.34 | |
| COG2814 | 394 | AraJ Arabinose efflux permease [Carbohydrate trans | 99.32 | |
| PRK03633 | 381 | putative MFS family transporter protein; Provision | 99.31 | |
| TIGR00881 | 379 | 2A0104 phosphoglycerate transporter family protein | 99.31 | |
| PRK10504 | 471 | putative transporter; Provisional | 99.31 | |
| PRK10473 | 392 | multidrug efflux system protein MdtL; Provisional | 99.31 | |
| PRK03893 | 496 | putative sialic acid transporter; Provisional | 99.3 | |
| PRK09556 | 467 | uhpT sugar phosphate antiporter; Reviewed | 99.3 | |
| TIGR00924 | 475 | yjdL_sub1_fam amino acid/peptide transporter (Pept | 99.3 | |
| PRK10489 | 417 | enterobactin exporter EntS; Provisional | 99.3 | |
| PRK10077 | 479 | xylE D-xylose transporter XylE; Provisional | 99.29 | |
| PF07690 | 352 | MFS_1: Major Facilitator Superfamily; InterPro: IP | 99.27 | |
| TIGR00879 | 481 | SP MFS transporter, sugar porter (SP) family. This | 99.27 | |
| PRK10091 | 382 | MFS transport protein AraJ; Provisional | 99.27 | |
| PRK09952 | 438 | shikimate transporter; Provisional | 99.26 | |
| PRK14995 | 495 | methyl viologen resistance protein SmvA; Provision | 99.25 | |
| PLN00028 | 476 | nitrate transmembrane transporter; Provisional | 99.24 | |
| TIGR00712 | 438 | glpT glycerol-3-phosphate transporter. This model | 99.24 | |
| PRK11652 | 394 | emrD multidrug resistance protein D; Provisional | 99.24 | |
| TIGR00711 | 485 | efflux_EmrB drug resistance transporter, EmrB/QacA | 99.24 | |
| TIGR00903 | 368 | 2A0129 major facilitator 4 family protein. This fa | 99.24 | |
| PRK11273 | 452 | glpT sn-glycerol-3-phosphate transporter; Provisio | 99.24 | |
| PRK10207 | 489 | dipeptide/tripeptide permease B; Provisional | 99.23 | |
| TIGR00883 | 394 | 2A0106 metabolite-proton symporter. This model rep | 99.23 | |
| TIGR00886 | 366 | 2A0108 nitrite extrusion protein (nitrite facilita | 99.23 | |
| PRK09705 | 393 | cynX putative cyanate transporter; Provisional | 99.22 | |
| PRK15403 | 413 | multidrug efflux system protein MdtM; Provisional | 99.22 | |
| PRK11646 | 400 | multidrug resistance protein MdtH; Provisional | 99.22 | |
| PRK15402 | 406 | multidrug efflux system translocase MdfA; Provisio | 99.22 | |
| PRK11195 | 393 | lysophospholipid transporter LplT; Provisional | 99.22 | |
| TIGR00897 | 402 | 2A0118 polyol permease family. This family of prot | 99.21 | |
| PRK11043 | 401 | putative transporter; Provisional | 99.21 | |
| TIGR00887 | 502 | 2A0109 phosphate:H+ symporter. This model represen | 99.2 | |
| PRK11010 | 491 | ampG muropeptide transporter; Validated | 99.2 | |
| PRK15034 | 462 | nitrate/nitrite transport protein NarU; Provisiona | 99.2 | |
| COG2223 | 417 | NarK Nitrate/nitrite transporter [Inorganic ion tr | 99.18 | |
| PRK11102 | 377 | bicyclomycin/multidrug efflux system; Provisional | 99.18 | |
| PRK11128 | 382 | putative 3-phenylpropionic acid transporter; Provi | 99.18 | |
| TIGR00894 | 465 | 2A0114euk Na(+)-dependent inorganic phosphate cotr | 99.17 | |
| TIGR00806 | 511 | rfc RFC reduced folate carrier. Proteins of the RF | 99.17 | |
| TIGR00882 | 396 | 2A0105 oligosaccharide:H+ symporter. | 99.17 | |
| KOG3098 | 461 | consensus Uncharacterized conserved protein [Funct | 99.17 | |
| PF06813 | 250 | Nodulin-like: Nodulin-like; InterPro: IPR010658 Th | 99.17 | |
| TIGR00885 | 410 | fucP L-fucose:H+ symporter permease. This family d | 99.17 | |
| PF11700 | 477 | ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 | 99.14 | |
| PF05977 | 524 | MFS_3: Transmembrane secretion effector; InterPro: | 99.13 | |
| PRK09584 | 500 | tppB putative tripeptide transporter permease; Rev | 99.13 | |
| TIGR00898 | 505 | 2A0119 cation transport protein. | 99.12 | |
| PF06963 | 432 | FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi | 99.09 | |
| TIGR02718 | 390 | sider_RhtX_FptX siderophore transporter, RhtX/FptX | 99.08 | |
| PRK10406 | 432 | alpha-ketoglutarate transporter; Provisional | 99.07 | |
| TIGR00805 | 633 | oat sodium-independent organic anion transporter. | 99.06 | |
| KOG3762 | 618 | consensus Predicted transporter [General function | 99.06 | |
| KOG1330 | 493 | consensus Sugar transporter/spinster transmembrane | 99.05 | |
| KOG0569 | 485 | consensus Permease of the major facilitator superf | 99.05 | |
| COG2270 | 438 | Permeases of the major facilitator superfamily [Ge | 99.05 | |
| PRK11902 | 402 | ampG muropeptide transporter; Reviewed | 99.04 | |
| TIGR00792 | 437 | gph sugar (Glycoside-Pentoside-Hexuronide) transpo | 99.03 | |
| KOG2615 | 451 | consensus Permease of the major facilitator superf | 99.01 | |
| PTZ00207 | 591 | hypothetical protein; Provisional | 99.01 | |
| PRK10133 | 438 | L-fucose transporter; Provisional | 99.01 | |
| PF01306 | 412 | LacY_symp: LacY proton/sugar symporter; InterPro: | 99.01 | |
| TIGR01272 | 310 | gluP glucose/galactose transporter. Disruption of | 98.99 | |
| TIGR00880 | 141 | 2_A_01_02 Multidrug resistance protein. | 98.99 | |
| PRK08633 | 1146 | 2-acyl-glycerophospho-ethanolamine acyltransferase | 98.99 | |
| TIGR00926 | 654 | 2A1704 Peptide:H+ symporter (also transports b-lac | 98.98 | |
| PRK06814 | 1140 | acylglycerophosphoethanolamine acyltransferase; Pr | 98.97 | |
| PRK15075 | 434 | citrate-proton symporter; Provisional | 98.97 | |
| TIGR00901 | 356 | 2A0125 AmpG-related permease. | 98.93 | |
| TIGR01301 | 477 | GPH_sucrose GPH family sucrose/H+ symporter. This | 98.93 | |
| TIGR00896 | 355 | CynX cyanate transporter. This family of proteins | 98.92 | |
| KOG2504 | 509 | consensus Monocarboxylate transporter [Carbohydrat | 98.9 | |
| KOG0637 | 498 | consensus Sucrose transporter and related proteins | 98.87 | |
| KOG2532 | 466 | consensus Permease of the major facilitator superf | 98.85 | |
| PF03825 | 400 | Nuc_H_symport: Nucleoside H+ symporter | 98.85 | |
| KOG3764 | 464 | consensus Vesicular amine transporter [Intracellul | 98.83 | |
| KOG0253 | 528 | consensus Synaptic vesicle transporter SV2 (major | 98.83 | |
| TIGR00769 | 472 | AAA ADP/ATP carrier protein family. These proteins | 98.83 | |
| COG0477 | 338 | ProP Permeases of the major facilitator superfamil | 98.83 | |
| KOG3810 | 433 | consensus Micronutrient transporters (folate trans | 98.83 | |
| PF02487 | 402 | CLN3: CLN3 protein; InterPro: IPR003492 Batten's d | 98.82 | |
| PRK09848 | 448 | glucuronide transporter; Provisional | 98.81 | |
| PF06813 | 250 | Nodulin-like: Nodulin-like; InterPro: IPR010658 Th | 98.81 | |
| COG3104 | 498 | PTR2 Dipeptide/tripeptide permease [Amino acid tra | 98.8 | |
| KOG4686 | 459 | consensus Predicted sugar transporter [Carbohydrat | 98.78 | |
| KOG4332 | 454 | consensus Predicted sugar transporter [Carbohydrat | 98.75 | |
| PF06609 | 599 | TRI12: Fungal trichothecene efflux pump (TRI12); I | 98.75 | |
| PF13347 | 428 | MFS_2: MFS/sugar transport protein | 98.7 | |
| TIGR00788 | 468 | fbt folate/biopterin transporter. The only functio | 98.68 | |
| COG0738 | 422 | FucP Fucose permease [Carbohydrate transport and m | 98.67 | |
| KOG0255 | 521 | consensus Synaptic vesicle transporter SVOP and re | 98.66 | |
| KOG3574 | 510 | consensus Acetyl-CoA transporter [Inorganic ion tr | 98.65 | |
| COG2807 | 395 | CynX Cyanate permease [Inorganic ion transport and | 98.63 | |
| KOG0254 | 513 | consensus Predicted transporter (major facilitator | 98.62 | |
| PRK10429 | 473 | melibiose:sodium symporter; Provisional | 98.62 | |
| PRK09669 | 444 | putative symporter YagG; Provisional | 98.55 | |
| KOG2325 | 488 | consensus Predicted transporter/transmembrane prot | 98.44 | |
| PF00083 | 451 | Sugar_tr: Sugar (and other) transporter; InterPro: | 98.4 | |
| KOG2533 | 495 | consensus Permease of the major facilitator superf | 98.39 | |
| PF05978 | 156 | UNC-93: Ion channel regulatory protein UNC-93; Int | 98.39 | |
| PF06779 | 85 | DUF1228: Protein of unknown function (DUF1228); In | 98.35 | |
| PRK11462 | 460 | putative transporter; Provisional | 98.34 | |
| COG2211 | 467 | MelB Na+/melibiose symporter and related transport | 98.33 | |
| KOG0252 | 538 | consensus Inorganic phosphate transporter [Inorgan | 98.32 | |
| KOG3762 | 618 | consensus Predicted transporter [General function | 98.32 | |
| PF03209 | 403 | PUCC: PUCC protein; InterPro: IPR004896 This prote | 98.17 | |
| PF05631 | 354 | DUF791: Protein of unknown function (DUF791); Inte | 98.13 | |
| TIGR00939 | 437 | 2a57 Equilibrative Nucleoside Transporter (ENT). | 98.1 | |
| KOG2816 | 463 | consensus Predicted transporter ADD1 (major facili | 98.1 | |
| PF13000 | 544 | Acatn: Acetyl-coenzyme A transporter 1; InterPro: | 98.09 | |
| PF03219 | 491 | TLC: TLC ATP/ADP transporter; InterPro: IPR004667 | 98.05 | |
| PF00854 | 372 | PTR2: POT family; InterPro: IPR000109 This entry r | 98.02 | |
| KOG1479 | 406 | consensus Nucleoside transporter [Nucleotide trans | 98.01 | |
| PF12832 | 77 | MFS_1_like: MFS_1 like family | 97.97 | |
| KOG1237 | 571 | consensus H+/oligopeptide symporter [Amino acid tr | 97.96 | |
| PF12832 | 77 | MFS_1_like: MFS_1 like family | 97.83 | |
| TIGR00926 | 654 | 2A1704 Peptide:H+ symporter (also transports b-lac | 97.81 | |
| COG3202 | 509 | ATP/ADP translocase [Energy production and convers | 97.69 | |
| KOG2563 | 480 | consensus Permease of the major facilitator superf | 97.65 | |
| PF03137 | 539 | OATP: Organic Anion Transporter Polypeptide (OATP) | 97.62 | |
| PF07672 | 267 | MFS_Mycoplasma: Mycoplasma MFS transporter; InterP | 97.49 | |
| PF05978 | 156 | UNC-93: Ion channel regulatory protein UNC-93; Int | 97.45 | |
| KOG3626 | 735 | consensus Organic anion transporter [Secondary met | 97.44 | |
| TIGR00769 | 472 | AAA ADP/ATP carrier protein family. These proteins | 97.31 | |
| PF01770 | 412 | Folate_carrier: Reduced folate carrier; InterPro: | 97.27 | |
| PF03092 | 433 | BT1: BT1 family; InterPro: IPR004324 Members of th | 97.16 | |
| PF01733 | 309 | Nucleoside_tran: Nucleoside transporter; InterPro: | 97.08 | |
| PF06963 | 432 | FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi | 97.06 | |
| PF06779 | 85 | DUF1228: Protein of unknown function (DUF1228); In | 96.96 | |
| PRK03612 | 521 | spermidine synthase; Provisional | 96.91 | |
| PF02487 | 402 | CLN3: CLN3 protein; InterPro: IPR003492 Batten's d | 96.56 | |
| KOG0637 | 498 | consensus Sucrose transporter and related proteins | 96.49 | |
| KOG1479 | 406 | consensus Nucleoside transporter [Nucleotide trans | 96.38 | |
| KOG3098 | 461 | consensus Uncharacterized conserved protein [Funct | 96.35 | |
| KOG3097 | 390 | consensus Predicted membrane protein [Function unk | 96.08 | |
| COG0477 | 338 | ProP Permeases of the major facilitator superfamil | 95.58 | |
| PF00854 | 372 | PTR2: POT family; InterPro: IPR000109 This entry r | 95.08 | |
| PF03219 | 491 | TLC: TLC ATP/ADP transporter; InterPro: IPR004667 | 94.9 | |
| COG3202 | 509 | ATP/ADP translocase [Energy production and convers | 94.71 | |
| KOG1237 | 571 | consensus H+/oligopeptide symporter [Amino acid tr | 94.55 | |
| PRK03612 | 521 | spermidine synthase; Provisional | 94.42 | |
| KOG3880 | 409 | consensus Predicted small molecule transporter inv | 92.5 | |
| KOG3574 | 510 | consensus Acetyl-CoA transporter [Inorganic ion tr | 92.23 | |
| TIGR00939 | 437 | 2a57 Equilibrative Nucleoside Transporter (ENT). | 91.98 | |
| PF13000 | 544 | Acatn: Acetyl-coenzyme A transporter 1; InterPro: | 90.94 | |
| KOG2601 | 503 | consensus Iron transporter [Inorganic ion transpor | 89.66 | |
| KOG4332 | 454 | consensus Predicted sugar transporter [Carbohydrat | 87.15 | |
| KOG3880 | 409 | consensus Predicted small molecule transporter inv | 85.51 | |
| KOG2881 | 294 | consensus Predicted membrane protein [Function unk | 82.22 | |
| COG4262 | 508 | Predicted spermidine synthase with an N-terminal m | 80.98 |
| >KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-46 Score=351.12 Aligned_cols=461 Identities=29% Similarity=0.514 Sum_probs=387.4
Q ss_pred CCCchHHHHHHHHHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcc-cccCCccccCcchhHHHHHHHHHHHHHH
Q 010375 21 GKVTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKH-AHENNYCKYDNQGLAAFTSSLYLAGLVA 99 (512)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~g~~~s~~~l~~~i~ 99 (512)
++++++...+++.+.++.+-+||+.+.+++. ....++|..+...+... +...+. -+...+.+.+++.+|.++|
T Consensus 3 ~~~t~~L~~~~~~~~~gsf~~Gy~~~~iNap---~~~i~~f~n~t~~~r~g~~~s~~~---~~~lwS~~vs~f~iG~~~G 76 (485)
T KOG0569|consen 3 PKLTRRLLLAVIVATLGSFQFGYNIGVVNAP---QELIKSFINETLIERYGLPLSDST---LDLLWSLIVSIFFIGGMIG 76 (485)
T ss_pred CCccHHHHHHHHHHHHhchhhhhhheecCch---HHHHHHHHHHHHHHhcCCCCChHH---HHHHHHHHHHHHHHHHHHH
Confidence 5667788888888888999999999998866 45666666554433322 111111 1234667788999999999
Q ss_pred HHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHH
Q 010375 100 SFVASPVTRDYGRRASIICGGISFLLGAALNAAA---ANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMM 176 (512)
Q Consensus 100 ~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~ 176 (512)
+++.|+++||+|||..+.++.++..++.++..++ +++..++++|++.|+..|......+-++.|..|++.||....+
T Consensus 77 s~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~ 156 (485)
T KOG0569|consen 77 SFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTL 156 (485)
T ss_pred HHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHH
Confidence 9999999999999999999998888888877665 7889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhccCCChhHHHH-cCCHHHHHHHHHHHcCCchhhH
Q 010375 177 FQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIE-RGKKVEGRRVLEKIRGTKEVNA 255 (512)
Q Consensus 177 ~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~-~~~~~~~~~~~~~~~~~~~~~~ 255 (512)
.+.+..+|.+++..++.-....+...|++.+.+..+++++..+...++||||||+.. +++.+||++.++..++.++.+.
T Consensus 157 ~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~ 236 (485)
T KOG0569|consen 157 LQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEA 236 (485)
T ss_pred HHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchh
Confidence 999999999999888544445556679999999999999999999999999999998 8999999999999999986665
Q ss_pred HHHHHHHHHHh---hcccCcccHHHhcccc-hhHHHHHHHHHHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHH
Q 010375 256 EYQDMVDASEL---ANSIKHPFRNILERRN-RPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGA 331 (512)
Q Consensus 256 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 331 (512)
+.++..++.++ +++.+.+++++++++. +++..+.+.+.....+.+.+...+|...++.+.|++..++.+.....+.
T Consensus 237 ~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~ 316 (485)
T KOG0569|consen 237 EIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGI 316 (485)
T ss_pred HHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 55443333222 2235677889998764 5556777778888889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeee
Q 010375 332 VLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTV 411 (512)
Q Consensus 332 ~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (512)
..++.++++.++.||.|||++++.+..++.+..+++.......... .....+..+.+.+++...++.+.+|+++.+
T Consensus 317 v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~----~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi 392 (485)
T KOG0569|consen 317 VNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSF----GSWLSYLCIAAIFLFIISFAIGPGPIPWFI 392 (485)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHh----hhHHHHHHHHHHHHHHHhhhcCCCchhHHH
Confidence 9999999999999999999999999998888887777655432100 012233457788889999999999999999
Q ss_pred ecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHhcc
Q 010375 412 PSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLPETKGVPIEEMILLWRKH 491 (512)
Q Consensus 412 ~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (512)
.+|++|++.|..++++....+.+..++....+..+.+..|...++.+.+.+.+..+..+..+||||+|+..|+.++.+++
T Consensus 393 ~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 393 GAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGPYVFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEELEKR 472 (485)
T ss_pred HHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999889999999999999999999999999999998877665
|
|
| >PRK10077 xylE D-xylose transporter XylE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-42 Score=345.30 Aligned_cols=443 Identities=28% Similarity=0.508 Sum_probs=326.4
Q ss_pred chHHHHHHHHHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHHhh
Q 010375 24 TPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVA 103 (512)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~ 103 (512)
.+.....++++.++.+.++||.+.+++. .|.+.++|.+.. .++++++..+.+++.+++.++..++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---------~~~~~~~~~~~~~~~s~~~ig~~~~~~~~ 75 (479)
T PRK10077 7 SSYIFSITLVATLGGLLFGYDTAVISGT--VESLNTVFVAPQ---------NLSESAANSLLGFCVASALIGCIIGGALG 75 (479)
T ss_pred chHHHHHHHHHHHHHHhcCcccceehHh--HHHHHHHhcccc---------cccccCChhHHHHHHHHHHHHHHHHHHHH
Confidence 3445666667778899999999999876 677888885543 55678899999999999999999999999
Q ss_pred hhhhhhhchhHHHHHHHHHHHHHHHHHHhh------------chHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCch
Q 010375 104 SPVTRDYGRRASIICGGISFLLGAALNAAA------------ANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRG 171 (512)
Q Consensus 104 g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~------------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 171 (512)
|+++||+|||++++++.++.+++.++++++ +.++.++++|+++|++.|...+...++++|++|+++|+
T Consensus 76 G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg 155 (479)
T PRK10077 76 GYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRG 155 (479)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhh
Confidence 999999999999999999999998888763 23567889999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhc------ccCCCchhHHHHhhHHHHHHHHHHhhccCCChhHHHHcCCHHHHHHHHH
Q 010375 172 GLNMMFQLATTLGIFTANMINYGTQ------KLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLE 245 (512)
Q Consensus 172 ~~~~~~~~~~~lG~~~~~~~~~~~~------~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~ 245 (512)
+++++.+.+..+|.++++.++.... ..+..+||+.|++.+++.++..+..+++||+|+|+..+++.+++++..+
T Consensus 156 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~ 235 (479)
T PRK10077 156 KLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILR 235 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHH
Confidence 9999999999999999887743222 1245699999999888888777777779999999988888888877777
Q ss_pred HHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHhcCCCCchhhHH
Q 010375 246 KIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYS 325 (512)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 325 (512)
+..+.+......++..+....++ ...+..+. ..............+.....+....++.|.+.++.|.+.......
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~ 311 (479)
T PRK10077 236 KIMGNTLATQALQEIKHSLDHGR---KTGGKLLM-FGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGASTDIALLQ 311 (479)
T ss_pred HHcCChhHHHHHHHHHHHHHHhh---hhhhhhcc-hhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCCCCchHHHH
Confidence 66554432222222111111000 00111111 111111222223333344455666778899888899988777777
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhccc
Q 010375 326 SAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWG 405 (512)
Q Consensus 326 ~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (512)
....++..+++.++.++++||+|||+.+..+.++..++.+++...... ..........++++..+++..+.
T Consensus 312 ~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~ 382 (479)
T PRK10077 312 TIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYT---------QAPGIVALLSMLFYVAAFAMSWG 382 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhc---------CcccHHHHHHHHHHHHHHhcccc
Confidence 788888999999999999999999999999888888877766543210 01112233344445555555555
Q ss_pred ceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHH------hhcchh-hHHHHHHHHHHHHHHHhhccccCCC
Q 010375 406 PLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLL------CSFKFG-IFLFFAGWVTIMTIFVYFFLPETKG 478 (512)
Q Consensus 406 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~------~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (512)
+..+.+++|.+|++.|+++.|+.+...+++.++++.+.+.+. +..++. .++++++++.+..++.+++.||+|+
T Consensus 383 ~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 462 (479)
T PRK10077 383 PVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKG 462 (479)
T ss_pred chhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhccccCCC
Confidence 666788999999999999999999999999999988776554 344433 3444455555555566667889998
Q ss_pred CCHHHHHHHHhc
Q 010375 479 VPIEEMILLWRK 490 (512)
Q Consensus 479 ~~~~~~~~~~~~ 490 (512)
++.+|.+++.++
T Consensus 463 ~~~~~~~~~~~~ 474 (479)
T PRK10077 463 KTLEEMEALWEP 474 (479)
T ss_pred CCHHHHHHHHhh
Confidence 888877666543
|
|
| >TIGR00887 2A0109 phosphate:H+ symporter | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-43 Score=352.71 Aligned_cols=440 Identities=18% Similarity=0.220 Sum_probs=312.0
Q ss_pred cCCCchHHHHHHHHHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHH
Q 010375 20 QGKVTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVA 99 (512)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~ 99 (512)
+.+..++++.+++++.++.+.++||.+.++.+ .|.+..+++ .++.+.+..+.+++.+.+.++..++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~--~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~ig~~ig 72 (502)
T TIGR00887 7 TAPFGWQHFRAIVIAGVGFFTDSYDLFCISLV--TKMLGYVYY------------HGKGPLPSSVSAAVNGSASIGTLAG 72 (502)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHhc------------cCcccchHHHHHHHHHHHHHHHHHH
Confidence 35667788888889999999999999998877 344444321 1123456778899999999999999
Q ss_pred HHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhch------HHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhH
Q 010375 100 SFVASPVTRDYGRRASIICGGISFLLGAALNAAAAN------LAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGL 173 (512)
Q Consensus 100 ~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 173 (512)
++++|+++||+|||+++..+.++..++.++++++++ ++.++++|+++|++.|...+....+++|++|+++|+++
T Consensus 73 ~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~ 152 (502)
T TIGR00887 73 QLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAM 152 (502)
T ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHH
Confidence 999999999999999999999999999999998876 78999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcc---------------------cCCCchhHHHHhhHHHHHHHHHHhhccCCChhHHH
Q 010375 174 NMMFQLATTLGIFTANMINYGTQK---------------------LETWGWRLSLGLAAAPALMMTVGGILLPETPNSLI 232 (512)
Q Consensus 174 ~~~~~~~~~lG~~~~~~~~~~~~~---------------------~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~ 232 (512)
+++......+|.++++.++..... ....+||+.|.+.++++++.++..+++||||+|+.
T Consensus 153 ~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~ 232 (502)
T TIGR00887 153 MAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTA 232 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHH
Confidence 999999999999999887532211 11247999999999988888888888999999999
Q ss_pred HcCCHH-HHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccc---hhHHHHHHHHHHHHHhhchhHHHhhH
Q 010375 233 ERGKKV-EGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRN---RPQLVMAIFMPMFQILTGINSILFYA 308 (512)
Q Consensus 233 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (512)
.+++.+ ++++.+++....+..+.. ++.++..++++..+.+++++++.+. .++..+......+.....++....+.
T Consensus 233 ~~~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~ 311 (502)
T TIGR00887 233 DVAKDVEQAASDMSAVLQVKIEAEP-DEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQ 311 (502)
T ss_pred HhCcchHHHHHHHHHHhccccccCc-ccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHcccccc
Confidence 887764 466666655432211110 0000000011111235677765322 11222322333333333445666778
Q ss_pred HHHHHhcCCCCchhhH------------HHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccC
Q 010375 309 PVLFQSMGFKGDASLY------------SSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFG 376 (512)
Q Consensus 309 ~~~~~~~g~~~~~~~~------------~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (512)
|.++++.|++....+. ......++.+++.++.++++||+|||+.+..+..+..++..++......
T Consensus 312 p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~--- 388 (502)
T TIGR00887 312 KVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNH--- 388 (502)
T ss_pred HHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHh---
Confidence 8888888886543221 2333445667788899999999999999888877766666555543210
Q ss_pred CCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc------
Q 010375 377 PNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSF------ 450 (512)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~------ 450 (512)
.. ........++....++.+..++.+.+.+|.+|++.|+++.|+.+..++++++++|.+.+.+.+..
T Consensus 389 ------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 461 (502)
T TIGR00887 389 ------LS-THGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGY 461 (502)
T ss_pred ------cc-hhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccc
Confidence 00 01111222222223344455666788899999999999999999999999999999999998843
Q ss_pred ----ch-hhHHHHHHHHHHHHHHHhhccccCCCCCHHHHH
Q 010375 451 ----KF-GIFLFFAGWVTIMTIFVYFFLPETKGVPIEEMI 485 (512)
Q Consensus 451 ----g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (512)
+. ..++++++++++. .+..+++||+++++++|++
T Consensus 462 ~~~~~~~~~~~i~~~~~~~~-~i~~~~lpEt~~~~leei~ 500 (502)
T TIGR00887 462 PTGIWMGHVLEIFALFMFLG-ILFTLLIPETKGKSLEELS 500 (502)
T ss_pred cccccchHHHHHHHHHHHHH-HHHheEeccCCCCCHHhhh
Confidence 22 2344454444444 4455678999998887664
|
This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083). |
| >TIGR01299 synapt_SV2 synaptic vesicle protein SV2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-42 Score=348.89 Aligned_cols=424 Identities=17% Similarity=0.204 Sum_probs=319.5
Q ss_pred CCchHHHHHHHHHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHH
Q 010375 22 KVTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASF 101 (512)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~ 101 (512)
...+++|.++++++++.+.+++|...++.+ +|.+.+++ +++..+.+++.+++.++.+++++
T Consensus 160 ~~~~~~~~l~~i~~l~~~~~g~d~~~is~i--lp~i~~~~-----------------gls~~~~g~l~s~~~lG~iiG~l 220 (742)
T TIGR01299 160 GHGRFQWALFFVLGLALMADGVEVFVVGFV--LPSAEKDL-----------------CIPDSGKGMLGLIVYLGMMVGAF 220 (742)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHh-----------------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 456778888888899999999999888766 56666665 88999999999999999999999
Q ss_pred hhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHH
Q 010375 102 VASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLAT 181 (512)
Q Consensus 102 ~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~ 181 (512)
++|+++||+|||+++++++++.+++.++++++++++.++++|++.|++.++..+...++++|++|+++|++.++++.+++
T Consensus 221 i~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~ 300 (742)
T TIGR01299 221 FWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFW 300 (742)
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcc-----------cCCCchhHHHHhhHHHHHHHHHHhhccCCChhHHHHcCCHHHHHHHHHHHcCC
Q 010375 182 TLGIFTANMINYGTQK-----------LETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGT 250 (512)
Q Consensus 182 ~lG~~~~~~~~~~~~~-----------~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~ 250 (512)
.+|.++++.++..... ....+||+.+++.++++++.+++.+++||+|+|+..+++.+++.+.++++...
T Consensus 301 ~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~ 380 (742)
T TIGR01299 301 MIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDT 380 (742)
T ss_pred HHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcC
Confidence 9999999887533221 12247999999999888888888888999999999999999999999988765
Q ss_pred chhh----HHH---HHHHHHHHh------hccc------------------CcccHHHhcccchhHHHHHHHHHHHHHhh
Q 010375 251 KEVN----AEY---QDMVDASEL------ANSI------------------KHPFRNILERRNRPQLVMAIFMPMFQILT 299 (512)
Q Consensus 251 ~~~~----~~~---~~~~~~~~~------~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (512)
+... .+. +..+..... +++. ..+++++++.+.+++.+ .+++.+++...
T Consensus 381 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl-~l~~~wf~~~~ 459 (742)
T TIGR01299 381 NMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITI-KLMGVWFTLSF 459 (742)
T ss_pred CCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHH-HHHHHHHHHHH
Confidence 4211 100 000000000 0000 01345556555544444 45555666777
Q ss_pred chhHHHhhHHHHHHhc------------------------------------------CC-----C--------------
Q 010375 300 GINSILFYAPVLFQSM------------------------------------------GF-----K-------------- 318 (512)
Q Consensus 300 ~~~~~~~~~~~~~~~~------------------------------------------g~-----~-------------- 318 (512)
.++++..|+|.++++. |+ +
T Consensus 460 ~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (742)
T TIGR01299 460 GYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDV 539 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeec
Confidence 8899999999875431 00 0
Q ss_pred --C----------------------------------------------------chhhHHHHHHHHHHHHHHHHHHHHH
Q 010375 319 --G----------------------------------------------------DASLYSSAMTGAVLASSTLISIATV 344 (512)
Q Consensus 319 --~----------------------------------------------------~~~~~~~~~~~~~~~~~~~~~g~l~ 344 (512)
. ........+..++.+++.+++++++
T Consensus 540 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~ 619 (742)
T TIGR01299 540 TSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLM 619 (742)
T ss_pred cccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0113345566788999999999999
Q ss_pred hhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhH
Q 010375 345 DKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAG 424 (512)
Q Consensus 345 d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 424 (512)
||+|||+++..+.++.+++.+++.+.. . ....++..++.+++.+..+ +..+++++|++|++.|+++
T Consensus 620 Dr~GRr~~l~~~~~lsai~~ll~~~~~------------s-~~~ll~~~~l~g~~~~~~~-~~~~a~~aEl~Pt~~Rgta 685 (742)
T TIGR01299 620 DKIGRLRMLAGSMVLSCISCFFLSFGN------------S-ESAMIALLCLFGGLSIAAW-NALDVLTVELYPSDKRATA 685 (742)
T ss_pred HHhCCHHHHHHHHHHHHHHHHHHHHHc------------c-HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHcCHHHHHHH
Confidence 999999999888888777776655431 1 2223333334444444333 4446888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhhccccCCCCC
Q 010375 425 QSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLPETKGVP 480 (512)
Q Consensus 425 ~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (512)
+|+.+..+.+|++++|.+.+.+.+.. ....+++.+++.+++.++..++||++++.
T Consensus 686 ~Gi~~~~~rlGaiigp~i~g~L~~~~-~~~pf~i~a~~lll~~ll~~~LPET~~~~ 740 (742)
T TIGR01299 686 FGFLNALCKAAAVLGILIFGSFVGIT-KAAPILFASAALACGGLLALKLPDTRGQV 740 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHhCCCCcccc
Confidence 99999999999999999999887754 33344444444455555566779888754
|
This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices. |
| >KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-40 Score=329.43 Aligned_cols=457 Identities=37% Similarity=0.658 Sum_probs=366.2
Q ss_pred CCCchHHHHHHHHHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCc--chhHHHHHHHHHHHHH
Q 010375 21 GKVTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDN--QGLAAFTSSLYLAGLV 98 (512)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~g~~~s~~~l~~~i 98 (512)
...............++.+..+++ +..+....+....+++.... +...+. .+.+|+.+.+.++..+
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~fg~~-g~~g~~s~~~~~~~~~~~~~-----------~~~~~~~~~~~s~~~s~~~lga~~ 104 (513)
T KOG0254|consen 37 TMISPFVILLALVAALGGLLFGYD-GDIGGISGALDFLQRFASLY-----------DLSTGEYSVRQGLLTSILNLGALV 104 (513)
T ss_pred ccCceehHHHHHHHHHHHHHhCcc-cccccchhhHHHHHhccccc-----------ccccchhHHHHHHHHHHHHHHHHH
Confidence 344566777788888999999998 43333333333444432211 111122 5669999999999999
Q ss_pred HHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHH
Q 010375 99 ASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQ 178 (512)
Q Consensus 99 ~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~ 178 (512)
+++++|+++|++|||+.++++.+++.++.+++++++|+++++++|+++|+|.|+.....+.+++|..|++.||...+..+
T Consensus 105 g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~ 184 (513)
T KOG0254|consen 105 GSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQ 184 (513)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhccCCChhHHHHcCCHHHHHHHHHHHcCC--chhhHH
Q 010375 179 LATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGT--KEVNAE 256 (512)
Q Consensus 179 ~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~--~~~~~~ 256 (512)
....+|..++..+++..... ..+||..+.+..+++++..+..+++||+|+|+.++++.+++++.++++++. .+.+.+
T Consensus 185 l~~~~Gi~~~~~~~~~~~~~-~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~ 263 (513)
T KOG0254|consen 185 LFITIGILLGYCINYGTSKV-YAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVE 263 (513)
T ss_pred HHHHHHHHHHHHHhhhhccC-CccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHH
Confidence 99999999997764333322 158999999999999998888788999999999999999999999999983 344444
Q ss_pred HHHHHHHHHhh---cccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHH
Q 010375 257 YQDMVDASELA---NSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVL 333 (512)
Q Consensus 257 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 333 (512)
.++.+.....+ ...+..+.+++++...++..+...+..+.++++++...+|.+.+++..|.+... .......++..
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~ 342 (513)
T KOG0254|consen 264 LELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVN 342 (513)
T ss_pred HHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHH
Confidence 33333111111 111224667777667777888899999999999999999999999998876554 66677778888
Q ss_pred HHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeec
Q 010375 334 ASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPS 413 (512)
Q Consensus 334 ~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (512)
+++..++.++.||+|||+.++.+...+.++.+++.........+.. ......+..+...+++...+..++.++++.+.+
T Consensus 343 ~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~s 421 (513)
T KOG0254|consen 343 FLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPN-SSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVS 421 (513)
T ss_pred HHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCC-cccchhHHHHHHHHHHHHHHhcccccchhhhhh
Confidence 8898999999999999999999999999999888776543211100 122446677888888889999999999999999
Q ss_pred ccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-hhhHHHHHHHHHHHHH-HHhhccccCCCCCHHHHHHHHhcc
Q 010375 414 EIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK-FGIFLFFAGWVTIMTI-FVYFFLPETKGVPIEEMILLWRKH 491 (512)
Q Consensus 414 ~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 491 (512)
|.+|.+.|+.+.++....+++...+....+....+..+ ...++.+.+++.+... +.++++||+|+++++|+++..+++
T Consensus 422 Eifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~~~~~~ 501 (513)
T KOG0254|consen 422 EIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINELFEEG 501 (513)
T ss_pred ccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHHHHHcC
Confidence 99999999999999999999999888887777777766 6677777777777777 788999999999999998876554
Q ss_pred c
Q 010375 492 W 492 (512)
Q Consensus 492 ~ 492 (512)
.
T Consensus 502 ~ 502 (513)
T KOG0254|consen 502 I 502 (513)
T ss_pred C
Confidence 3
|
|
| >TIGR00879 SP MFS transporter, sugar porter (SP) family | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-39 Score=320.56 Aligned_cols=447 Identities=35% Similarity=0.621 Sum_probs=322.5
Q ss_pred CCCchHHHHHHHHHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHH
Q 010375 21 GKVTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVAS 100 (512)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~ 100 (512)
++..++.+..++++.++.++.+++...++.. ++.+..++.-+. ..+-+.+..+.+++.+.+.++..+++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~i~~ 88 (481)
T TIGR00879 20 GSTYWKVALLSLIAAIGGLMFGYDTGVIGGA--LALPAFEFKFTS---------ANSDSYSSSLWGLVVSIFLVGGFIGA 88 (481)
T ss_pred CcccHHHHHHHHHHHHHHHhcccccchhhhh--hhcHHHHHhcCC---------cccCCCChhHHHHHHHHHHHHHHHHH
Confidence 3445666777777777888889999888777 344444432110 11123578999999999999999999
Q ss_pred HhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHH
Q 010375 101 FVASPVTRDYGRRASIICGGISFLLGAALNAAA---ANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMF 177 (512)
Q Consensus 101 ~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~ 177 (512)
+++|+++||+|||+++.++.+++.++.+++.+. .+++.+++.|+++|++.+...+....++.|++|+++|++++++.
T Consensus 89 ~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~ 168 (481)
T TIGR00879 89 LFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLY 168 (481)
T ss_pred HHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHH
Confidence 999999999999999999999999999998664 34568999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-HhhcccCCCchhHHHHhhHHHHHHHHHHhhccCCChhHHHHcCCHHHHHHHHHHHcCCchhhHH
Q 010375 178 QLATTLGIFTANMIN-YGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAE 256 (512)
Q Consensus 178 ~~~~~lG~~~~~~~~-~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (512)
..+..+|.++++.++ .........+||+.|++.++..++..+..+++||+|++...+++.++..+..++..+.++.+.+
T Consensus 169 ~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (481)
T TIGR00879 169 QLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKE 248 (481)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHH
Confidence 999999999999994 1144445679999999977777777777777999999888877777766655554433322111
Q ss_pred HHHH----HH-HHHhhcccCcccHHHhcccc--hhHHHHHHHHHHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHH
Q 010375 257 YQDM----VD-ASELANSIKHPFRNILERRN--RPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMT 329 (512)
Q Consensus 257 ~~~~----~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 329 (512)
..+. .. ...+.+..+..+.+.++..+ .++.++...+..+..........++.|.+.++.|++..+.+......
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 328 (481)
T TIGR00879 249 LLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIV 328 (481)
T ss_pred HHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHH
Confidence 1110 00 00011111222344443221 34445555555555555566778888999888999998888899999
Q ss_pred HHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceee
Q 010375 330 GAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGW 409 (512)
Q Consensus 330 ~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (512)
.++.+++.++.++++||++||+.+..+.++..++..++........... .....+..+....++..+++.+..+...
T Consensus 329 ~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (481)
T TIGR00879 329 GAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGS---SKSSGNVAIVFILLFIAFFAMGWGPVPW 405 (481)
T ss_pred HHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCc---ccchhHHHHHHHHHHHHHHHccccCeeh
Confidence 9999999999999999999999988887776666666553221110000 0011233344444555556656667777
Q ss_pred eeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHH-HHHHHHHHHHHhhccccCCCCCH
Q 010375 410 TVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFF-AGWVTIMTIFVYFFLPETKGVPI 481 (512)
Q Consensus 410 ~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 481 (512)
.++.|.+|++.|+++.++.+...+++++++|.+.+.+.++.++...+.+ ++++++..++.+++.+|+++++.
T Consensus 406 ~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~ 478 (481)
T TIGR00879 406 VIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPETKGRTL 478 (481)
T ss_pred hhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheecccCCCCCh
Confidence 7879999999999999999999999999999999999988776554444 44444555555566677765544
|
This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083) |
| >PRK10642 proline/glycine betaine transporter; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-40 Score=324.47 Aligned_cols=400 Identities=17% Similarity=0.243 Sum_probs=275.2
Q ss_pred HHHHHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcc--hhHH--HHHHHHHHHHHHHHhhhh
Q 010375 30 ACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQ--GLAA--FTSSLYLAGLVASFVASP 105 (512)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~--~~g~--~~s~~~l~~~i~~~~~g~ 105 (512)
..+.+.++.++++||..+++.. .|.+.++|+++. ++. ..+. +.++.++++.++++++|+
T Consensus 17 ~~~~~~~g~~~~~~d~~~~~~~--~~~i~~~~~~~~---------------~~~~~~~~~~~~~~~~~l~~~ig~~~~G~ 79 (490)
T PRK10642 17 AITAASLGNAMEWFDFGVYGFV--AYALGKVFFPGA---------------DPSVQMIAALATFSVPFLIRPLGGLFFGM 79 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--HHHHHHhhCCCC---------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555678999999999998877 677888886542 221 1222 257888999999999999
Q ss_pred hhhhhchhHHHHHHHHHHHHHHHHHHhhchHHH--------HHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHH
Q 010375 106 VTRDYGRRASIICGGISFLLGAALNAAAANLAM--------LLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMF 177 (512)
Q Consensus 106 l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~--------l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~ 177 (512)
++||+|||+++..+.++++++++++++++|++. ++++|+++|++.|+.++...++++|++|+++|+++.++.
T Consensus 80 l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~ 159 (490)
T PRK10642 80 LGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWL 159 (490)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHH
Confidence 999999999999999999999999999999874 889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhc--c----cCCCchhHHHHhhHHHHHHHHHHhhccCCChhHHHHcCCHHHHHHHHHHHcCCc
Q 010375 178 QLATTLGIFTANMINYGTQ--K----LETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTK 251 (512)
Q Consensus 178 ~~~~~lG~~~~~~~~~~~~--~----~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~ 251 (512)
..+..+|..+++.+..... . ...+|||+.|++.++++++.+++..++||+|+|...+++.++..+
T Consensus 160 ~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~~~--------- 230 (490)
T PRK10642 160 DFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGDR--------- 230 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhhcc---------
Confidence 9988889888876632111 1 235799999999887777666666678999987543222111000
Q ss_pred hhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHh-cCCCCchhhHHHHHHH
Q 010375 252 EVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTG 330 (512)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~ 330 (512)
+...++.+.++++++++ .++...... ...+.....++....|.|.++++ +|++..+.........
T Consensus 231 ------------~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~ 296 (490)
T PRK10642 231 ------------EGLQDGPKVSFKEIATK-HWRSLLTCI-GLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIM 296 (490)
T ss_pred ------------ccccccccCCHHHHHHH-hHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 00001123355566543 222222222 22233334556677788888855 7888877777777888
Q ss_pred HHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeee
Q 010375 331 AVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWT 410 (512)
Q Consensus 331 ~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (512)
++.+++.++.|+++||+|||+.+..+.++..+....+..... .......+...++.+.+.+...... ..
T Consensus 297 ~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~g~~~~~~~g~~-~~ 365 (490)
T PRK10642 297 IGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILIN----------SNVIGLIFAGLLMLAVILNCFTGVM-AS 365 (490)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 889999999999999999999887776543333222221110 0111222223333333333222222 35
Q ss_pred eecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-hhhHHHHHHHHHHHHHHHhhccccCCCCC
Q 010375 411 VPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK-FGIFLFFAGWVTIMTIFVYFFLPETKGVP 480 (512)
Q Consensus 411 ~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (512)
+..|.+|++.|+++.|+.+....+++.++|.+.+.+.+..+ +.....+..+..+++++..+++||++++.
T Consensus 366 ~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~pes~~~~ 436 (490)
T PRK10642 366 TLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTMKETANRP 436 (490)
T ss_pred HHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccCCC
Confidence 66789999999999998777778888899999999887654 23222233334444444555668876543
|
|
| >COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-39 Score=290.37 Aligned_cols=407 Identities=14% Similarity=0.102 Sum_probs=301.0
Q ss_pred hhcCCCchHHHHHHHHHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHH
Q 010375 18 QYQGKVTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGL 97 (512)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~ 97 (512)
+..+..+++++.+...+.+++...++..-..+.+ .|.++++. ++|.+|+|++.+.+++.|.
T Consensus 18 ~~~~~y~~~r~qif~~~fiGYa~fYl~RknF~~a--~p~l~e~~-----------------~lsk~~lG~i~s~f~i~YG 78 (448)
T COG2271 18 EIDKTYKRWRIQIFLSIFIGYAAFYLTRKNFNLA--MPALIEDG-----------------GLSKTQLGILGSAFSITYG 78 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhc--cHHHHHhc-----------------CCCHHHHHHHHHHHHHHHH
Confidence 3344556667777778888998888888777666 67777665 7899999999999999999
Q ss_pred HHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHH
Q 010375 98 VASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMF 177 (512)
Q Consensus 98 i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~ 177 (512)
++-++.|.++||.+.|+.+.+++++.++.+++++++++.+.+.++-++.|..+|...|.+...+..|++++|||+..+++
T Consensus 79 ~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siW 158 (448)
T COG2271 79 VSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIW 158 (448)
T ss_pred HHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhc-cCCChhHHHHcCCHHHHHHHHHHHcCCchhhHH
Q 010375 178 QLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGIL-LPETPNSLIERGKKVEGRRVLEKIRGTKEVNAE 256 (512)
Q Consensus 178 ~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~-~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (512)
+++.++|..+.|++........+.+||..|++.++++++..++.++ .+|+|+.. +.++.++.
T Consensus 159 n~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~-----------------GLP~ie~~ 221 (448)
T COG2271 159 NTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSE-----------------GLPPIEEY 221 (448)
T ss_pred hhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCcccc-----------------CCCCHHHh
Confidence 9999999999999843255566679999999999999877666555 78888411 11111111
Q ss_pred HHHHHHH-HHhhcccCcccHHHh-cccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHh-cCCCCchhhHHHHHHHHHH
Q 010375 257 YQDMVDA-SELANSIKHPFRNIL-ERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVL 333 (512)
Q Consensus 257 ~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~ 333 (512)
.++..+. .++++++..+.++++ +....++.++.+++..+.....-+.+..|.|.|+.+ .|++..+++...+.+-.++
T Consensus 222 ~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~ag 301 (448)
T COG2271 222 RGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAG 301 (448)
T ss_pred hcCchhhhhhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHh
Confidence 1111111 111111113334433 333344457777777777777788899999999877 9999999999999999999
Q ss_pred HHHHHHHHHHHhhc--CChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeee
Q 010375 334 ASSTLISIATVDKL--GRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTV 411 (512)
Q Consensus 334 ~~~~~~~g~l~d~~--~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (512)
++|.+++||++||+ |||....+.+.+.....++..... +..+.++..+++...++... +..-+.-..
T Consensus 302 l~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~----------~~~~~~l~~~~l~~iGf~Iy-GPqmLiGl~ 370 (448)
T COG2271 302 LPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLA----------PNGSYLLDAILLFIIGFLIY-GPQMLIGLA 370 (448)
T ss_pred hHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcC----------CCccHHHHHHHHHHHHHHHh-hHHHHHHHH
Confidence 99999999999997 566555443332222222222211 11222333333333332222 222233455
Q ss_pred ecccCChhhhhhHHHHHHHHHHH-HHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhh
Q 010375 412 PSEIFPLETRSAGQSITVAVNLF-FTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYF 471 (512)
Q Consensus 412 ~~~~~p~~~~~~~~g~~~~~~~~-g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 471 (512)
..|..|++..|++.|+...++++ |...+....+.+.|..||...+++..++.+++.+++.
T Consensus 371 a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~ 431 (448)
T COG2271 371 AAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLL 431 (448)
T ss_pred HhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHH
Confidence 67999999999999999999999 8889999999999998877666665555555554443
|
|
| >COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=283.98 Aligned_cols=372 Identities=16% Similarity=0.179 Sum_probs=289.3
Q ss_pred HHHHHHHHHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHHhhhh
Q 010375 26 SVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASP 105 (512)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~ 105 (512)
+.+..++...++.|..+.+..+.... +|++.+|+ |+|..+.|++.|.|.+++.++.++...
T Consensus 10 ~~~~~l~aLa~~~F~igttEfv~~gL--Lp~iA~dl-----------------~vs~~~aG~lis~yAl~~ai~ap~l~~ 70 (394)
T COG2814 10 PMWLALLALALAAFAIGTTEFVPVGL--LPPIAADL-----------------GVSEGAAGQLITAYALGVALGAPLLAL 70 (394)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHhc--hHHHHHHc-----------------CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555567777777777666655 78888877 999999999999999999999999999
Q ss_pred hhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHH
Q 010375 106 VTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGI 185 (512)
Q Consensus 106 l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~ 185 (512)
+.||+.||++++..+.++.++.+++++++||+.++++|++.|+..|..++...++..+..|+++|++++++...+.+++.
T Consensus 71 lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~ 150 (394)
T COG2814 71 LTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLAT 150 (394)
T ss_pred HHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhc-cC-CChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHH
Q 010375 186 FTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGIL-LP-ETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDA 263 (512)
Q Consensus 186 ~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~-~~-e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (512)
++|.++ +..+.+.+|||+.|+..++++++..+..+. +| .++
T Consensus 151 v~GvPL--Gt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP~~~~----------------------------------- 193 (394)
T COG2814 151 VLGVPL--GTFLGQLFGWRATFLAIAVLALLALLLLWKLLPPSEI----------------------------------- 193 (394)
T ss_pred HHhccH--HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCCCccC-----------------------------------
Confidence 999999 677778889999999999999988776655 78 111
Q ss_pred HHhhcccCcc---cHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHH
Q 010375 264 SELANSIKHP---FRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLIS 340 (512)
Q Consensus 264 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 340 (512)
+++.+.+ ..+.++++. .........+.....+..+.|..|.+.+..|++....++....++++.++|+.++
T Consensus 194 ---~~~~~~~~~~~~~~l~~p~---v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~g 267 (394)
T COG2814 194 ---SGSLPGPLRTLLRLLRRPG---VLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLG 267 (394)
T ss_pred ---CCCCCcchhHHHHHhcCch---HHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHH
Confidence 0111222 233344443 3333333333333344455555666656699999999999999999999999999
Q ss_pred HHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhh
Q 010375 341 IATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLET 420 (512)
Q Consensus 341 g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 420 (512)
|++.|| +.|+.+.....+..+....+.+.. .+.+.......++++......... ....++ .-++.
T Consensus 268 Grl~dr-~~~~~l~~~~~l~a~~~l~l~~~~------------~~~~~~~~~~~~wg~a~~~~~~~~-~~~~a~-~~p~~ 332 (394)
T COG2814 268 GRLADR-GPRRALIAALLLLALALLALTFTG------------ASPALALALLFLWGFAFSPALQGL-QTRLAR-LAPDA 332 (394)
T ss_pred hhhccc-cchhHHHHHHHHHHHHHHHHHHhc------------chHHHHHHHHHHHHHHhhhhhhHH-HHHhcc-cCCCc
Confidence 999999 888888887777777776665542 223344444444444433222222 233334 23578
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhhccc
Q 010375 421 RSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLP 474 (512)
Q Consensus 421 ~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 474 (512)
+..+.+++....++|..+|..+.|.+.|+.|+......+++..+.++.+.+...
T Consensus 333 ~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~ 386 (394)
T COG2814 333 ADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSA 386 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988888777777777766655443
|
|
| >TIGR00898 2A0119 cation transport protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=311.72 Aligned_cols=382 Identities=19% Similarity=0.308 Sum_probs=279.1
Q ss_pred CCccccC---cchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhh
Q 010375 75 NNYCKYD---NQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIG 151 (512)
Q Consensus 75 ~~~~~~s---~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 151 (512)
.+|+|++ ..+.+++.+++.++..++++++|+++||+|||++++++.++.+++.++++++++++.+++.|++.|++.+
T Consensus 116 ~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~~ 195 (505)
T TIGR00898 116 VTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIG 195 (505)
T ss_pred EEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhcc
Confidence 6778998 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhccCCChhHH
Q 010375 152 FGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSL 231 (512)
Q Consensus 152 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~l 231 (512)
...+...+++.|++|+++|+++.++...+..+|.++++.+++.. . +||+.|++.+++.++..+..+++||+|+|+
T Consensus 196 ~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~--~---~wr~~~~~~~i~~~~~~~~~~~~~esp~~l 270 (505)
T TIGR00898 196 GIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFI--P---DWRWLQLAVSLPTFLFFLLSWFVPESPRWL 270 (505)
T ss_pred chHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHh--h---HHHHHHHHHHHHHHHHHHHHHhcCCChHHH
Confidence 99999999999999999999999999999999999999985332 2 499999999998888877778899999999
Q ss_pred HHcCCHHHHHHHHHHHcCCchhh--HHHHHHH-HHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhH
Q 010375 232 IERGKKVEGRRVLEKIRGTKEVN--AEYQDMV-DASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYA 308 (512)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (512)
..+++.+++.+.+++..+.+... .+..+.. ++...+++.+.+++++++++..+...+...+..+.....++..
T Consensus 271 ~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 346 (505)
T TIGR00898 271 ISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGL---- 346 (505)
T ss_pred HHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 99999999888877665433211 1111111 1111111223567778877665554444444333332222222
Q ss_pred HHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhH
Q 010375 309 PVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSIL 388 (512)
Q Consensus 309 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (512)
+.+....+.+ ........++..+++.++.+++.||+|||+.+..+.++.+++.+++.... ....+.
T Consensus 347 ~~~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~-----------~~~~~~ 412 (505)
T TIGR00898 347 VLDLGNLGGN---IYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVP-----------VDLYFL 412 (505)
T ss_pred hccccccCCC---hHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcC-----------CCchHH
Confidence 2222334433 23445566788889999999999999999999888777777665554431 111122
Q ss_pred HHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHH
Q 010375 389 VVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIF 468 (512)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 468 (512)
.....++..++....+ +..+.+.+|.+|++.|+++.|+.+....+|++++|.+.+ +.+...+..++++++ +.+++.+
T Consensus 413 ~~~~~~~~~~~~~~~~-~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~~~~~~~~~~~~-~~~~~~~ 489 (505)
T TIGR00898 413 RTALAVLGKFGITSAF-QMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGEKWLFLPLVLFGG-LALLAGI 489 (505)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHHHHHhhHHHHHHH-HHHHHHH
Confidence 3333333333333333 344678899999999999999999999999999999998 444333444444444 4444445
Q ss_pred HhhccccCCCCCHH
Q 010375 469 VYFFLPETKGVPIE 482 (512)
Q Consensus 469 ~~~~~~~~~~~~~~ 482 (512)
..+++||+++++++
T Consensus 490 ~~~~lpet~~~~l~ 503 (505)
T TIGR00898 490 LTLFLPETKGVPLP 503 (505)
T ss_pred HHHcCcCCCCCCCC
Confidence 55678888876654
|
|
| >PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-45 Score=361.80 Aligned_cols=441 Identities=36% Similarity=0.674 Sum_probs=341.3
Q ss_pred HHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhch
Q 010375 33 VAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGR 112 (512)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Gr 112 (512)
++.++.+.++||.+.++...........+..+.. .++.+.+..+.+++.+...+|..+|++++|.++||+||
T Consensus 4 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GR 75 (451)
T PF00083_consen 4 IASLGGFLFGYDLGLIGSFASLLGFLQFFGWSSS--------ESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGR 75 (451)
T ss_pred eeHHHHHHHHHHHHHHhhHHhhhhhhhccccccc--------cccccchHHHHHHHHHHHHhhhcccccccccccccccc
Confidence 3456779999999998877544433333322210 11122255678999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhc---hHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHH
Q 010375 113 RASIICGGISFLLGAALNAAAA---NLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTAN 189 (512)
Q Consensus 113 r~~l~~~~~~~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~ 189 (512)
|+.+.++.++..+++++.++++ +++.+.++|+++|++.|+..+....++.|..|+++|++..++.+.+..+|.+++.
T Consensus 76 k~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~ 155 (451)
T PF00083_consen 76 KPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLAS 155 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999 9999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHhhcccC-CCchhHHHHhhHHHHHHHHHHhhccCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhc
Q 010375 190 MINYGTQKLE-TWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELAN 268 (512)
Q Consensus 190 ~~~~~~~~~~-~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (512)
.++....... ...||+.+.+.++++++..+..+++||||+|+..+++.+|+++.+++.++.+..+.+.++..++.++.+
T Consensus 156 ~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 235 (451)
T PF00083_consen 156 LIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQ 235 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccceeccccccccccccccccccccccccccccccccccccc
Confidence 8843332222 246999999999999888888888999999999999999999999997766554444444433333333
Q ss_pred ccCcccHHHhcccc-hhHHHHHHHHHHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhc
Q 010375 269 SIKHPFRNILERRN-RPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKL 347 (512)
Q Consensus 269 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 347 (512)
+.+..++++++.+. +++.+....+..+....++....++.+.+.+..+.+.. ........+..+++.+++..+.||+
T Consensus 236 ~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (451)
T PF00083_consen 236 ESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRF 313 (451)
T ss_pred ccceeeeeccccccccccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccc
Confidence 33356777777654 45555555666666666667777888888887777665 3344555677778888888999999
Q ss_pred CChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHH
Q 010375 348 GRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSI 427 (512)
Q Consensus 348 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~ 427 (512)
|||+.+..+..+..++...+...... ..+ .+.......+....+....++.++.++.+.+.+|.+|++.|+++.++
T Consensus 314 GRr~~~i~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~ 389 (451)
T PF00083_consen 314 GRRKLLIIGLLLMAICSLILGIIFFL--GVS--SSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGL 389 (451)
T ss_pred cccccccccccccccccccccccccc--ccc--cccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 99999988888777776666411100 000 00111333444555555666667788888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcc-hhhHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHH
Q 010375 428 TVAVNLFFTFVIAQIFLTLLCSFK-FGIFLFFAGWVTIMTIFVYFFLPETKGVPIEEMILL 487 (512)
Q Consensus 428 ~~~~~~~g~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (512)
....+++++++.+.+...+.+..+ ...+.++++++.+..++.++++||+|+++++|++++
T Consensus 390 ~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei~~~ 450 (451)
T PF00083_consen 390 SYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEIQEM 450 (451)
T ss_pred ccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEeeCCCCCHHHHHhh
Confidence 999999999999999988888777 777778888888888888899999999999998764
|
Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane |
| >PRK10406 alpha-ketoglutarate transporter; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-37 Score=299.43 Aligned_cols=388 Identities=18% Similarity=0.207 Sum_probs=261.5
Q ss_pred CchHHHHHHHHHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcch---hHHHHHHHHHHHHHH
Q 010375 23 VTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQG---LAAFTSSLYLAGLVA 99 (512)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~---~g~~~s~~~l~~~i~ 99 (512)
.+.+++..+..++++.+++++|...++.. .|.+.++++|+ +.+..+ .+.+.+..+++..++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~l~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~ig 79 (432)
T PRK10406 16 DTRRRIWAIVGASSGNLVEWFDFYVYSFC--SLYFAHIFFPS--------------GNTTTQLLQTAGVFAAGFLMRPIG 79 (432)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHhCCC--------------CCchHHHHHHHHHHHHHHHHHHHH
Confidence 34456666667788999999999998877 67788887643 123333 344455556666699
Q ss_pred HHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHH--------HHHHHHHHHhhhhhhccchhhhhhhhcCCCCCch
Q 010375 100 SFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLA--------MLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRG 171 (512)
Q Consensus 100 ~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 171 (512)
++++|+++||+|||+++..+.++++++++++++++++. .++++|+++|++.|+..+...++++|++|+++|+
T Consensus 80 ~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg 159 (432)
T PRK10406 80 GWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKG 159 (432)
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCccc
Confidence 99999999999999999999999999999999998874 5889999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcc------cCCCchhHHHHhhHHHHHHHHHHhhccCCChhHHHHcCCHHHHHHHHH
Q 010375 172 GLNMMFQLATTLGIFTANMINYGTQK------LETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLE 245 (512)
Q Consensus 172 ~~~~~~~~~~~lG~~~~~~~~~~~~~------~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~ 245 (512)
++.++...+...|.++++.+...... ...+|||++|++.++++++...+...+||+|++..+
T Consensus 160 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~~~------------ 227 (432)
T PRK10406 160 FYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQQETR------------ 227 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCchHHHh------------
Confidence 99999988888888888766322111 125799999999888887766665667887742100
Q ss_pred HHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHh-cCCCCchhhH
Q 010375 246 KIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS-MGFKGDASLY 324 (512)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~ 324 (512)
+++++.+++++++++.. +.......+.....++.+..|.|.++++ +|++..+.+.
T Consensus 228 ---------------------~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~ 283 (432)
T PRK10406 228 ---------------------ALKEAGSLKGLWRNRRA---FIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASG 283 (432)
T ss_pred ---------------------hhcccccHHHHHhhHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 00012245556543321 2222222222233455667788888755 7998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcc
Q 010375 325 SSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSW 404 (512)
Q Consensus 325 ~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (512)
......+...++.++.|+++||++||+.+.....+..+....+..... ........+....+.....+. .
T Consensus 284 ~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~-~ 353 (432)
T PRK10406 284 IMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQ---------NVSSPYAAFGLVMCALLIVSF-Y 353 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHH---------cCCcHHHHHHHHHHHHHHHHH-H
Confidence 888888888888999999999999998876655543333222211110 001111111112111122221 1
Q ss_pred cceeeeeecccCChhhhhhHHHHHHHHHHH-HHHHHHHHHHHHHhhcc-hhhHHHHHHHHHHHHHHHhhcc
Q 010375 405 GPLGWTVPSEIFPLETRSAGQSITVAVNLF-FTFVIAQIFLTLLCSFK-FGIFLFFAGWVTIMTIFVYFFL 473 (512)
Q Consensus 405 ~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~-g~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~ 473 (512)
.+..+.+.+|.+|++.|+++.|+.+..+++ .+...|.+.+.+ +..+ +...+++.++..+++++..+++
T Consensus 354 ~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~~~~l 423 (432)
T PRK10406 354 TSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFLVSLML 423 (432)
T ss_pred HHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 223356778999999999999999988775 344577777744 5445 4444444444444444444443
|
|
| >PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=295.60 Aligned_cols=384 Identities=16% Similarity=0.140 Sum_probs=282.4
Q ss_pred CchHHHHHHHHHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHHh
Q 010375 23 VTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFV 102 (512)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~ 102 (512)
..+++|...+++.+..+.+++|....+.. .|.+.+++ |+++.+.+++.+.+.++..+++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-----------------~~s~~~~g~~~~~~~~~~~~~~~~ 69 (406)
T PRK11551 9 SSSRLALTIGLCFLVALLEGLDLQSAGVA--APRMAQEF-----------------GLDVAQMGWAFSAGILGLLPGALL 69 (406)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHh-----------------CCCHHHHHHHHHHHHHHHHHHHHH
Confidence 34477888888888999999999887766 56666665 889999999999999999999999
Q ss_pred hhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHH
Q 010375 103 ASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATT 182 (512)
Q Consensus 103 ~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 182 (512)
.|+++||+|||+++..+.++..++.++++++++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..
T Consensus 70 ~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 149 (406)
T PRK11551 70 GGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVP 149 (406)
T ss_pred HHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHH-hhccCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHH
Q 010375 183 LGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVG-GILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMV 261 (512)
Q Consensus 183 lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~-~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (512)
+|..+++.+ .....+..+||+.|++.++..++..++ ..++||+|++..++++.++.
T Consensus 150 ~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--------------------- 206 (406)
T PRK11551 150 FGGALASVI--GVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQR--------------------- 206 (406)
T ss_pred HHHHHHHHH--HHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhh---------------------
Confidence 999999998 445556678999999887766655544 44589987543222111000
Q ss_pred HHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHH
Q 010375 262 DASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISI 341 (512)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g 341 (512)
+...+..++.+..++. .......+...........+.|.+.++.|+++.+.+.......++.+++.++.+
T Consensus 207 ---------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g 276 (406)
T PRK11551 207 ---------APVLRALFGEGRATAT-LLLWISYFFTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIG 276 (406)
T ss_pred ---------hhhHHHHhhhhhhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHH
Confidence 0000111111111111 111222222223345566778888888999999999999999999999999999
Q ss_pred HHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhh
Q 010375 342 ATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETR 421 (512)
Q Consensus 342 ~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 421 (512)
++.||+++|+.+..+.+...++...+... +..+.......+.+.+.. +..+....+..|.+|++.|
T Consensus 277 ~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~p~~~~ 342 (406)
T PRK11551 277 ALMDRLRPRRVVLLIYAGILASLAALAAA-------------PSFAGMLLAGFAAGLFVV-GGQSVLYALAPLFYPTQVR 342 (406)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHhc-------------CcHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHcchhhh
Confidence 99999999988877655544444333221 112222233333333332 2234445777899999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-hhhHHHHHHHHHHHHHHHhhc
Q 010375 422 SAGQSITVAVNLFFTFVIAQIFLTLLCSFK-FGIFLFFAGWVTIMTIFVYFF 472 (512)
Q Consensus 422 ~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~ 472 (512)
+++.|+.+....+|..++|.+.|.+.++.+ +...+.....+.+.+.++.+.
T Consensus 343 g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK11551 343 GTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALL 394 (406)
T ss_pred hhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998755 334444444444444444443
|
|
| >PRK09952 shikimate transporter; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-36 Score=292.10 Aligned_cols=392 Identities=15% Similarity=0.171 Sum_probs=264.2
Q ss_pred HHHHHHHHHHHHhhhhhhhccccccccccHH-HHHHhhhhhhhhhcccccCCccccCcchhHHHH-----HHHHHHHHHH
Q 010375 26 SVIVACFVAAIGGSIFGYDIGISGGVTSMDA-FLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFT-----SSLYLAGLVA 99 (512)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~-----s~~~l~~~i~ 99 (512)
+++.......++.++++||...++.. .|. +.++++|+. ++. .+++. ++.+++..++
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~~~~~~~~~~~---------------~~~-~~~~~~~~~~~~~~~~~~~g 80 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGIT--AALVFNREFFPQV---------------SPA-MGTLAAFATFGVGFLFRPLG 80 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHhcCCCC---------------CcH-HHHHHHHHHHHHHHHHHhhH
Confidence 33456666778999999999988765 333 444555432 333 34443 4556778899
Q ss_pred HHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHH--------HHHHHHHHHhhhhhhccchhhhhhhhcCCCCCch
Q 010375 100 SFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLA--------MLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRG 171 (512)
Q Consensus 100 ~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 171 (512)
+++.|+++||+|||+++..+.+++++++++++++++++ .++++|+++|++.|+.++....++.|++|+++|+
T Consensus 81 ~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg 160 (438)
T PRK09952 81 GVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKA 160 (438)
T ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCc
Confidence 99999999999999999999999999999999999987 5888999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcc------cCCCchhHHHHhhHHHHHHHHHHhhccCCChhHHHHcCCHHHHHHHHH
Q 010375 172 GLNMMFQLATTLGIFTANMINYGTQK------LETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLE 245 (512)
Q Consensus 172 ~~~~~~~~~~~lG~~~~~~~~~~~~~------~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~ 245 (512)
+..+....+..+|.+++..+...... ...++||++|++.+++.++...+....||+|+|..++++.++
T Consensus 161 ~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~~------ 234 (438)
T PRK09952 161 FYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQAA------ 234 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhccc------
Confidence 99999999999999988766322211 134799999999888776655555568898865432211100
Q ss_pred HHcCCchhhHHHHHHHHHHHhhcccCcccHH-HhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHh-cCCCCchhh
Q 010375 246 KIRGTKEVNAEYQDMVDASELANSIKHPFRN-ILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS-MGFKGDASL 323 (512)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~ 323 (512)
.+.+.+..+ ++++++ .+.......++....++....|.|.+.++ +|++.....
T Consensus 235 ----------------------~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~ 289 (438)
T PRK09952 235 ----------------------AKKRIPVIEALLRHPG---AFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFL 289 (438)
T ss_pred ----------------------ccccCCHHHHHHHchH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence 000111122 222222 12222222223333445566677777654 788776555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhc
Q 010375 324 YSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWS 403 (512)
Q Consensus 324 ~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (512)
......++..+++.++.|+++||++||+.+..+.++..++...+..... ..+..+..+...++.+.+.+..
T Consensus 290 ~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~~~~~~~~ 360 (438)
T PRK09952 290 NIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALE---------AQSIFWIVFFSIMLANIAHDMV 360 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHH---------cCChHHHHHHHHHHHHHHHHHH
Confidence 5555667778888899999999999999887776554443332222110 0011222222233333333322
Q ss_pred ccceeeeeecccCChhhhhhHHHHHHHHHH-HHHHHHHHHHHHHHhhcc--hhhHHHHHHHHHHHHHHHhhccccC
Q 010375 404 WGPLGWTVPSEIFPLETRSAGQSITVAVNL-FFTFVIAQIFLTLLCSFK--FGIFLFFAGWVTIMTIFVYFFLPET 476 (512)
Q Consensus 404 ~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~-~g~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (512)
.+..+++..|.+|++.|+++.++.+..+. +++.++|.+.+.+.+..+ +...+.+.+++.+++.+..+..+++
T Consensus 361 -~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~ 435 (438)
T PRK09952 361 -VCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLMKDN 435 (438)
T ss_pred -HHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHcccc
Confidence 23335778899999999999999776654 889999999999988542 5555555666666666665666553
|
|
| >PRK12307 putative sialic acid transporter; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-36 Score=292.94 Aligned_cols=375 Identities=16% Similarity=0.188 Sum_probs=270.0
Q ss_pred hHHHHHHHHHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHHhhh
Q 010375 25 PSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVAS 104 (512)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g 104 (512)
+.++...+.+.++.+.++++.....+. +|.+.+++ |+++.+.+++.+.+.++..++++++|
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~-----------------~~s~~~~~~~~~~~~~~~~l~~~~~g 74 (426)
T PRK12307 14 RPQKNALFSAWLGYVFDGFDFMLIFYI--MYLIKADL-----------------GLTDMEGAFLATAAFIGRPFGGALFG 74 (426)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHH--HHHHHHHh-----------------CCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555566678888888988887665 55555555 88999999999999999999999999
Q ss_pred hhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHH
Q 010375 105 PVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLG 184 (512)
Q Consensus 105 ~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG 184 (512)
+++||+|||+++..+.++.+++.++++++++++.++++|+++|++.+...+....++.|++|+++|++++++...+..+|
T Consensus 75 ~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg 154 (426)
T PRK12307 75 LLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIG 154 (426)
T ss_pred HHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhccCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHH
Q 010375 185 IFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDAS 264 (512)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (512)
.++++.+ .....+..+||+.|++..+..++...+....||++++..++.+. +++.. .
T Consensus 155 ~~~~~~l--~~~l~~~~~w~~~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~------------~~~~~---------~ 211 (426)
T PRK12307 155 NIIAAYF--MPSFAEAYGWRAAFFVGLLPVLLVIYIRARAPESKEWEEAKLSG------------KGKHS---------Q 211 (426)
T ss_pred HHHHHHH--HHHHcccCCHHHHHHHHHHHHHHHHHHHHHCCCChHHHHhhhhc------------ccccc---------c
Confidence 9999988 45555667999999886554444333333457765432211000 00000 0
Q ss_pred HhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 010375 265 ELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATV 344 (512)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~ 344 (512)
...+..+.+++++++++..+....... ..+...........+.|.++++.|+++.+.+.......++.++++++.+++.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~ 290 (426)
T PRK12307 212 SAWSVFSLSMKGLFNRAQFPLTLCVFI-VLFSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCA 290 (426)
T ss_pred cchhhhhHHHHHHHhhchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000001123455555544333222222 2222222333456678888888899888889888899999999999999999
Q ss_pred hhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHh-hhcccceeeeeecccCChhhhhh
Q 010375 345 DKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAF-GWSWGPLGWTVPSEIFPLETRSA 423 (512)
Q Consensus 345 d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~ 423 (512)
||++||+.+..+.++..+....+.... ...... ...++++..+ ..+..+....++.|.+|++.|++
T Consensus 291 dr~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~ 357 (426)
T PRK12307 291 DRIGLKKTFSIGLLMSFLFIFPLFRIP------------QDNYLL-LGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGL 357 (426)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHc------------cccHHH-HHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhh
Confidence 999999988877666554443332211 011111 1122222211 11222333456689999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchhhH
Q 010375 424 GQSITVAVNLFFTFVIAQIFLTLLCSFKFGIF 455 (512)
Q Consensus 424 ~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~ 455 (512)
++|+.+....+++.++|.+.+.+.+..++...
T Consensus 358 ~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~ 389 (426)
T PRK12307 358 GTGLIYNLAATSGTFNSMAATWLGITMGLGAA 389 (426)
T ss_pred hhhHHHHHHhHHHHHHHHHHHHHHHcccHHHH
Confidence 99999999999999999999999998885543
|
|
| >TIGR02332 HpaX 4-hydroxyphenylacetate permease | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=293.95 Aligned_cols=394 Identities=15% Similarity=0.101 Sum_probs=268.7
Q ss_pred HHHHHHHHHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHHhhhh
Q 010375 26 SVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASP 105 (512)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~ 105 (512)
++|.....++++.+++++|....+.+ .|.+.+++ |++..+.|++.+++.+++++++++.|+
T Consensus 5 ~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~l~~~~-----------------~~s~~~~g~~~s~~~~~~~~~~~~~g~ 65 (412)
T TIGR02332 5 LFRRLIIFLFILFIFSFLDRINIGFA--GLTMGKDL-----------------GLSATMFGLAATLFYAAYVICGIPSNI 65 (412)
T ss_pred ehhHHHHHHHHHHHHHHhhhhhHHHH--HHhhHhhc-----------------CCCHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 34555556677778889999887766 44444444 999999999999999999999999999
Q ss_pred hhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHH
Q 010375 106 VTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGI 185 (512)
Q Consensus 106 l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~ 185 (512)
++||+|||+++..+.++++++.+++++++|++.+++.|+++|++.+...+....++.|++|+++|+++++++..+.++|.
T Consensus 66 l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~ 145 (412)
T TIGR02332 66 MLAIIGARRWIAGIMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTM 145 (412)
T ss_pred HHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcc----cCCCchhHHHHhhHHHHHHHHHH-hhccCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHH
Q 010375 186 FTANMINYGTQK----LETWGWRLSLGLAAAPALMMTVG-GILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDM 260 (512)
Q Consensus 186 ~~~~~~~~~~~~----~~~~~Wr~~f~~~~~~~~~~~~~-~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (512)
+++++++..... .+..|||+.|++.++++++..++ .+++||+|+... .-..++.+...+..+......++.++
T Consensus 146 ~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~- 223 (412)
T TIGR02332 146 ALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAK-WLDEEDKKALKEMIDNDQLTLEQPEG- 223 (412)
T ss_pred HHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCC-CCCHHHHHHHHHHHHhcccccccccc-
Confidence 999998543321 13469999999988887765544 455899884210 00011111111111100000000000
Q ss_pred HHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHhc--CCCCchhhHHHHHHHHHHHHHHH
Q 010375 261 VDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSM--GFKGDASLYSSAMTGAVLASSTL 338 (512)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~ 338 (512)
...+.....+..+++++ . +.++...+..++....+..+..|.|.+++++ +++..+++.......++.+++.+
T Consensus 224 -~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l 297 (412)
T TIGR02332 224 -AFAHAAMPQRSMLREIF----T-PAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMI 297 (412)
T ss_pred -ccccccccHHHHHHHhc----C-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHH
Confidence 00000000011122222 1 1234445555555556777888999999874 66778888889999999999999
Q ss_pred HHHHHHhhcCChhHHH-HhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCC
Q 010375 339 ISIATVDKLGRRALLI-SGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFP 417 (512)
Q Consensus 339 ~~g~l~d~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 417 (512)
+.++++||+++|+... .......++. ++.... ......+..+.+...+.. ...+..+....|.+|
T Consensus 298 ~~g~l~dr~~~r~~~~~~~~~~~~~~~-~~~~~~------------~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~ 363 (412)
T TIGR02332 298 WWSRHSDRLKERKHHTALPYLFAAAGW-LLASAT------------DHNLIQLLGIIMASMGSF-SAMAIFWTTPDQSIS 363 (412)
T ss_pred HHHHHhcccCccHHHHHHHHHHHHHHH-HHHHhc------------CCHHHHHHHHHHHHHHhh-hhhhHHHhhcccccc
Confidence 9999999999776533 3322222222 111110 011111112222222221 112233345567899
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-hhhHHHHHH
Q 010375 418 LETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK-FGIFLFFAG 460 (512)
Q Consensus 418 ~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g-~~~~~~~~~ 460 (512)
++.|+++.|+.+...++|++++|.+.|.+.+..+ |...+.++.
T Consensus 364 ~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~ 407 (412)
T TIGR02332 364 LQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVA 407 (412)
T ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHH
Confidence 9999999999999999999999999999999875 555444433
|
This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially. |
| >TIGR00891 2A0112 putative sialic acid transporter | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=289.27 Aligned_cols=390 Identities=15% Similarity=0.136 Sum_probs=273.9
Q ss_pred CchHHHHHHHHHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHHh
Q 010375 23 VTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFV 102 (512)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~ 102 (512)
.++++|.....+.++.+.++++....++. .|.+.+++ |++..+.+++.+.+.++..+++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~-----------------~~s~~~~g~~~~~~~~~~~~~~~~ 66 (405)
T TIGR00891 6 LTRAQWNAFSAAWLGWLLDAFDFFLVALV--LAEVAGEF-----------------GLTTVDAASLISAALISRWFGALM 66 (405)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHh-----------------CCChhhHHHHHHHHHHHHHHHHHH
Confidence 45667777777788999999999887766 56666555 889999999999999999999999
Q ss_pred hhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHH
Q 010375 103 ASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATT 182 (512)
Q Consensus 103 ~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 182 (512)
.|+++||+|||+++..+.++.+++.++++++++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..
T Consensus 67 ~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 146 (405)
T TIGR00891 67 FGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYA 146 (405)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhccCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHH
Q 010375 183 LGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVD 262 (512)
Q Consensus 183 lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (512)
+|.++++.++.........+||+.|++.++..++..+....+||++++..++++.++..+..++..+..... +
T Consensus 147 ~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---- 219 (405)
T TIGR00891 147 VGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFALWLRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHRI---A---- 219 (405)
T ss_pred HHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhccchhh---h----
Confidence 999999998433322222359999998777776666666668998765433322222111111111110000 0
Q ss_pred HHHhhcccCcccHHHhc-ccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHH-hcCCCCchhhHHHHHHHHHHHHHHHHH
Q 010375 263 ASELANSIKHPFRNILE-RRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQ-SMGFKGDASLYSSAMTGAVLASSTLIS 340 (512)
Q Consensus 263 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~ 340 (512)
...+.......+ .+..+..+...................+.|.+.. ++|++..+.+.......++.+++.++.
T Consensus 220 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~ 294 (405)
T TIGR00891 220 -----NIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVF 294 (405)
T ss_pred -----hhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000000111 1111111222222222222222344455666655 489999999999999999999999999
Q ss_pred HHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhh
Q 010375 341 IATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLET 420 (512)
Q Consensus 341 g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 420 (512)
+++.||++||+.+..+.....+....+... ....+.......+.+.... +..+....++.|.+|++.
T Consensus 295 g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 361 (405)
T TIGR00891 295 GFLGDWLGRRKAYVCSLLAGQLLIIPVFAI------------GANVAVLGLGLFFQQMLVQ-GIWGILPKHLGEYFPTDQ 361 (405)
T ss_pred HHHHHHhCchhhhHHHHHHHHHHHHHHHHh------------CCchHHHHHHHHHHHHHHc-cchhhHHHHHhhhCCcch
Confidence 999999999998877665443222221111 0112222222233333333 223334567789999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-hhhHH
Q 010375 421 RSAGQSITVAVNLFFTFVIAQIFLTLLCSFK-FGIFL 456 (512)
Q Consensus 421 ~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g-~~~~~ 456 (512)
|+++.|+.+....++..++|.+.|.+.|+.| +...+
T Consensus 362 ~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~ 398 (405)
T TIGR00891 362 RAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTAL 398 (405)
T ss_pred hHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhH
Confidence 9999999999999999999999999999988 54433
|
|
| >PRK09556 uhpT sugar phosphate antiporter; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=300.12 Aligned_cols=400 Identities=11% Similarity=-0.006 Sum_probs=273.1
Q ss_pred CchHHHHHHHHHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHHh
Q 010375 23 VTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFV 102 (512)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~ 102 (512)
+.+..+.+...++++.+..+.|...++.+ .|.+.+++ |++..+.|++.+.+.+++.+++++
T Consensus 23 ~~~~~~~i~~~~~~~~~~~y~~r~~~~~~--~~~i~~~~-----------------~~s~~~~g~~~s~~~~~~~~~~~~ 83 (467)
T PRK09556 23 WFKPFMQSYLVVFIGYLTMYLIRKNFKAA--QNDMISTY-----------------GLSTTELGMIGLGFSITYGVGKTL 83 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcChhhh--hHHHHHhc-----------------CCCHHHHHHHHHHHHHHHHHHHhh
Confidence 34445556666677777778888888766 56666665 889999999999999999999999
Q ss_pred hhhhhhhhchhHHHHHHHHHHHHHHHHHHh-----hchHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHH
Q 010375 103 ASPVTRDYGRRASIICGGISFLLGAALNAA-----AANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMF 177 (512)
Q Consensus 103 ~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~ 177 (512)
.|+++||+|||+++..+.++++++.++.++ +++++.+++.|+++|++.+...+...++++|++|+++|+++++++
T Consensus 84 ~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~ 163 (467)
T PRK09556 84 VGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFW 163 (467)
T ss_pred hhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEee
Confidence 999999999999999988888877776665 589999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccc-CCCchhHHHHhhHHHHHHHHHHhhc-cCCChhHHHHcCCHHHHHHHHHHHcCCchhhH
Q 010375 178 QLATTLGIFTANMINYGTQKL-ETWGWRLSLGLAAAPALMMTVGGIL-LPETPNSLIERGKKVEGRRVLEKIRGTKEVNA 255 (512)
Q Consensus 178 ~~~~~lG~~~~~~~~~~~~~~-~~~~Wr~~f~~~~~~~~~~~~~~~~-~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~ 255 (512)
..+.++|.++++++....... ...+||..|.+.++++++..++.++ .+++|+.... .+.++ . ..+.. ..
T Consensus 164 ~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~-~~~~~---~---~~~~~--~~ 234 (467)
T PRK09556 164 NISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGW-GKAEE---I---FGEPI--SE 234 (467)
T ss_pred ecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCC-CChhh---c---ccCcc--ch
Confidence 999999999999884322211 1226999998888877766555444 5776632110 01111 0 00000 00
Q ss_pred HHHHHHHHHHhhcccCcccHH-----HhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHh-cCCCCchhhHHHHHH
Q 010375 256 EYQDMVDASELANSIKHPFRN-----ILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMT 329 (512)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~ 329 (512)
+. + ..++.+.+..+ .++++. ++...+..++....+.....|.|.++++ +|++..+++......
T Consensus 235 ~~----~---~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~ 303 (467)
T PRK09556 235 ED----K---ETESTDMTKWQIFVEYVLKNPV----IWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLF 303 (467)
T ss_pred hh----h---ccccccCcHHHHHHHHHHcChH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHH
Confidence 00 0 00000111111 233322 4444444445444556678889988765 899999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceee
Q 010375 330 GAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGW 409 (512)
Q Consensus 330 ~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (512)
.++.+++.++.|+++||+++|+.+.....+..++...+.... ....+......++.+.... +......
T Consensus 304 ~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~G~~~~-~~~~~~~ 371 (467)
T PRK09556 304 EIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQH-----------ATSEYMYLASLFALGFLVF-GPQLLIG 371 (467)
T ss_pred HHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHh-----------cCcHHHHHHHHHHHHHHHh-hHHHHHH
Confidence 999999999999999999998876654433333222221111 0112222222333332211 1111112
Q ss_pred eeecccCChhhhhhHHHHHHHHHHH-HHHHHHHHHHHHHh------------hcchhhHHHHHHHHHHHHHHHhhcc
Q 010375 410 TVPSEIFPLETRSAGQSITVAVNLF-FTFVIAQIFLTLLC------------SFKFGIFLFFAGWVTIMTIFVYFFL 473 (512)
Q Consensus 410 ~~~~~~~p~~~~~~~~g~~~~~~~~-g~~~~~~~~~~~~~------------~~g~~~~~~~~~~~~~~~~~~~~~~ 473 (512)
....|.+|++.++++.|+.+..+++ |.+++|.+.|.+.| ..+|...+.+..++.+++.+..+.+
T Consensus 372 ~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 372 VAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAIV 448 (467)
T ss_pred HHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHHH
Confidence 4556999999999999999999997 77999999999999 4566666666655555555555443
|
|
| >PRK11663 regulatory protein UhpC; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-36 Score=291.17 Aligned_cols=395 Identities=12% Similarity=0.056 Sum_probs=268.2
Q ss_pred chHHHHHHHHHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHHhh
Q 010375 24 TPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVA 103 (512)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~ 103 (512)
++.++.+.....++.+..+++...++.. +|.+.+++ |++..+.|++.+.+.+++.+++++.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-----------------g~s~~~~g~~~~~~~~~~~~~~~~~ 78 (434)
T PRK11663 18 RYWRRHILITMYLGYALFYFTRKSFNAA--MPEMLADL-----------------GLSRSDIGLLATLFYITYGVSKFVS 78 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHh--hHHHHHhc-----------------CCCHHHHHHHHHHHHHHHHHHHhhh
Confidence 3444455555667777777777666554 56665554 8899999999999999999999999
Q ss_pred hhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHH
Q 010375 104 SPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTL 183 (512)
Q Consensus 104 g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~l 183 (512)
|+++||+|||+++.++.++.+++.++++++++++.+++.|++.|++.|...+...+++.|++|+++|++++++.+.+.++
T Consensus 79 G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~ 158 (434)
T PRK11663 79 GIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNV 158 (434)
T ss_pred hHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHH-HhhccCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHH
Q 010375 184 GIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTV-GGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVD 262 (512)
Q Consensus 184 G~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~-~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (512)
|..+++.+ .....+..+||+.|++.++++++..+ ..+++||+|++...+...++..+ ..+
T Consensus 159 g~~~~~~~--~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~--------------~~~--- 219 (434)
T PRK11663 159 GGALIPLV--VGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHD--------------ALE--- 219 (434)
T ss_pred HHHHHHHH--HHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCccccccc--------------ccc---
Confidence 99999998 44555667999999998887765543 34457888753211100000000 000
Q ss_pred HHHhhcccCcccHHHhcc-cchhHHHHHHHHHHHHHhhchhHHHhhHHHHHH-hcCCCCchhhHHHHHHHHHHHHHHHHH
Q 010375 263 ASELANSIKHPFRNILER-RNRPQLVMAIFMPMFQILTGINSILFYAPVLFQ-SMGFKGDASLYSSAMTGAVLASSTLIS 340 (512)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~ 340 (512)
..++.++.+.+.++.++. ..+.+.++...+..+.....+..+..|.|.+++ ++|++..+++.......++.++++++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~ 299 (434)
T PRK11663 220 LAQQQEGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVA 299 (434)
T ss_pred cchhccccCCChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000011122222211 111122333333333334445566778888885 489999999999999999999999999
Q ss_pred HHHHhhc--CChhHHH-HhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCC
Q 010375 341 IATVDKL--GRRALLI-SGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFP 417 (512)
Q Consensus 341 g~l~d~~--~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 417 (512)
|+++||+ ++|+... ...+...+....+.... ..............+.+ ..+..........|.+|
T Consensus 300 g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~ 367 (434)
T PRK11663 300 GWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMP-----------FASYVMQAACFFTIGFF-VFGPQMLIGMAAAECSH 367 (434)
T ss_pred hhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcc-----------cccHHHHHHHHHHHHHH-HhhHHHHHHHHHHhccc
Confidence 9999998 3333322 21111111111111110 01111111111222211 11111111245579999
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHH
Q 010375 418 LETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIF 468 (512)
Q Consensus 418 ~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 468 (512)
++.|+++.|+.+...++|.+++|.+.|.+.|+.++...+...+++.++..+
T Consensus 368 ~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~ 418 (434)
T PRK11663 368 KEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISAL 418 (434)
T ss_pred HhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998877766666555544443
|
|
| >PRK03545 putative arabinose transporter; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-35 Score=284.73 Aligned_cols=339 Identities=13% Similarity=0.098 Sum_probs=247.2
Q ss_pred cccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchh
Q 010375 78 CKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAV 157 (512)
Q Consensus 78 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 157 (512)
+|+|+.+.|++.+.+.+++.++++++|+++||+|||+++..+.++.+++++++++++|++.++++|+++|++.+...+..
T Consensus 39 ~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~ 118 (390)
T PRK03545 39 FHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFAHAIFWSIT 118 (390)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 39999999999999999999999999999999999999999999999999999999999999999999999999888999
Q ss_pred hhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhh-ccCCChhHHHHcCC
Q 010375 158 PLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGI-LLPETPNSLIERGK 236 (512)
Q Consensus 158 ~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~-~~~e~p~~l~~~~~ 236 (512)
.+++.|++|+++|++++++...+.++|.+++|++ .....+..+||+.|++.++++++..+..+ ++||.|+. +
T Consensus 119 ~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l--~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~-----~ 191 (390)
T PRK03545 119 ASLAIRVAPAGKKAQALSLLATGTALAMVLGLPL--GRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPSE-----H 191 (390)
T ss_pred HHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhH--HHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCCC-----C
Confidence 9999999999999999999999999999999999 44455667999999999888776655443 36665420 0
Q ss_pred HHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHh-c
Q 010375 237 KVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS-M 315 (512)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 315 (512)
.+ ...+.++.++++..+...... .+ ..........+.+.+.++ .
T Consensus 192 ~~-------------------------------~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~l~~~~ 236 (390)
T PRK03545 192 SG-------------------------------SLKSLPLLFRRPALVSLYLLT---VV-VVTAHFTAYSYIEPFVQQVA 236 (390)
T ss_pred cc-------------------------------hHHHHHHHHhCcHHHHHHHHH---HH-HHHHHHHHHHHHHHHHHHhc
Confidence 00 000123344444322222111 11 111222233445555454 7
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHH
Q 010375 316 GFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICL 395 (512)
Q Consensus 316 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (512)
|++..+++......+++.++++++.+++.||+++|... .+..+..++...+.... +..+.......+
T Consensus 237 g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~------------~~~~~~~~~~~l 303 (390)
T PRK03545 237 GLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAA------------NSEWHLSVLSIF 303 (390)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHh------------chHHHHHHHHHH
Confidence 99999999999999999999999999999999987643 44433333333222211 112333334444
Q ss_pred HHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhhcc
Q 010375 396 FVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFL 473 (512)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 473 (512)
.+.+.. ...+.....+.+..| +.|++++|+.+...++|..++|.+.|.+.++.++...+...+++.+.+.+.....
T Consensus 304 ~g~~~~-~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 379 (390)
T PRK03545 304 WGIAIM-CIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILI 379 (390)
T ss_pred HHHHHh-cchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHH
Confidence 444433 222323355567666 6789999999999999999999999999999998777666666665555554433
|
|
| >KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=258.71 Aligned_cols=420 Identities=17% Similarity=0.162 Sum_probs=308.0
Q ss_pred CchHHHHHHHHHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHHh
Q 010375 23 VTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFV 102 (512)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~ 102 (512)
..+.+|...+.+..+...+....-..+.+ .| . .++.++.+..|..++......|..+++..
T Consensus 72 fgrfq~yl~~~ag~gwmad~m~~m~~s~i--~~--------~---------l~~~w~~s~~q~~llt~~v~~gmllga~~ 132 (528)
T KOG0253|consen 72 FGRFQWYLFFVAGMGWMADAMEMMLLSLI--LP--------A---------LDEVWGPSEGQAPLLTLSVFLGMLVGAMV 132 (528)
T ss_pred cccchhhHHHHhhhHHHHHHHHHHHHHHH--HH--------H---------HHhhhchhhhhhhHHHHHHHhhhhhhhhh
Confidence 45667777766666665544333222222 11 1 14556889999999999999999999999
Q ss_pred hhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHH
Q 010375 103 ASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATT 182 (512)
Q Consensus 103 ~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 182 (512)
||..+|++|||+.+.+..+...+...+.+.++|+..+.+.|.+.|+|.|+ .|...++-.|..|..+|...+-.. ..+.
T Consensus 133 w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~wa 210 (528)
T KOG0253|consen 133 WGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWA 210 (528)
T ss_pred hheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHH
Confidence 99999999999999999999999999999999999999999999999999 888888899999999999887777 8999
Q ss_pred HHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhccCCChhHHHHcCCHHHHHHHHHHHcCCchhh--------
Q 010375 183 LGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVN-------- 254 (512)
Q Consensus 183 lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~-------- 254 (512)
+|.+....+++ ....+.||||.....+.+..+.+...+++|||||++..+++++++.+.++++.+.+...
T Consensus 211 ig~v~ea~law--~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~ 288 (528)
T KOG0253|consen 211 IGQVFEALLAW--GVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLES 288 (528)
T ss_pred HHHHHHHHHHH--HHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeee
Confidence 99999999954 44566799999999888888888888889999999999999999999888886544110
Q ss_pred -H---HHHHH---H-HHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHhc---C-------
Q 010375 255 -A---EYQDM---V-DASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSM---G------- 316 (512)
Q Consensus 255 -~---~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g------- 316 (512)
. +.++. . .+.+..++......+++..+.++..+....+.+ .+...+++.......+++.. +
T Consensus 289 s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwf-gnafsyyg~VLlttelfqsgd~c~~~~r~~p 367 (528)
T KOG0253|consen 289 SAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWF-GNAFSYYGSVLLTTELFQSGDACPLYNRFLP 367 (528)
T ss_pred ehhhhhhhhhhchhhhhhccccccccchHhhcChHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHhccCccccchhcch
Confidence 0 00000 0 011122333445566776665555555444433 33334444444444343331 1
Q ss_pred ----------CCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchh
Q 010375 317 ----------FKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFS 386 (512)
Q Consensus 317 ----------~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (512)
.+...-..-..+..+..+.|.++.++++||+|||+.+....++..+..+++.... ..
T Consensus 368 ~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~-------------~r 434 (528)
T KOG0253|consen 368 TELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCK-------------TR 434 (528)
T ss_pred hHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhc-------------Cc
Confidence 1112223345667788999999999999999999999998888877776665542 12
Q ss_pred hHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHH
Q 010375 387 ILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMT 466 (512)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 466 (512)
....+..+..-++...++. +.|.|..|++|+..|+++.|.+...+++|+++.|.+. ...+...+...+++.+++++.+
T Consensus 435 n~~tvllf~arafisg~fq-vaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA-~~~e~s~sl~i~vy~~~~ilag 512 (528)
T KOG0253|consen 435 NAYTVLLFTARAFISGAFQ-VAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA-MRAELSTSLPIFVYGALFILAG 512 (528)
T ss_pred chhHHHHHHHHHHHhchhe-EEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH-HHhccceeehHHHHHHHHHHHH
Confidence 3344445555555555554 4489999999999999999999999999999999988 4455555666777777777777
Q ss_pred HHHhhccccCCCCCH
Q 010375 467 IFVYFFLPETKGVPI 481 (512)
Q Consensus 467 ~~~~~~~~~~~~~~~ 481 (512)
+...++--|+|++++
T Consensus 513 IavcffPiEtkGR~l 527 (528)
T KOG0253|consen 513 IAVCFFPIETKGRSL 527 (528)
T ss_pred HHheeeeeccCCCCC
Confidence 766666668888753
|
|
| >KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-37 Score=277.14 Aligned_cols=443 Identities=19% Similarity=0.213 Sum_probs=317.7
Q ss_pred CCchHHHHHHHHHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHH
Q 010375 22 KVTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASF 101 (512)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~ 101 (512)
...|+....+.++..+.+.|+||...++.+ .+-+...|..... ..=++++...+.+..+..+|.++|++
T Consensus 34 g~qw~~fk~i~iAG~GfftDsYDlF~I~lV--t~il~~lY~~~~~---------~~g~~ps~i~~~Vn~~A~vGti~GQl 102 (538)
T KOG0252|consen 34 GLQWKHFKAIIIAGMGFFTDSYDLFSISLV--TKILGYLYYHGDE---------SGGHYPSGVLALVNAAALVGTIFGQL 102 (538)
T ss_pred chhHHHHHHHHHhhhhhcccchhhhhHHHH--HHHHHHHhcCCCC---------CCCcCCchHHHHHHHHHHHHHHHHHH
Confidence 457889999999999999999999999877 4555555543221 11256888899999999999999999
Q ss_pred hhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhch-------HHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHH
Q 010375 102 VASPVTRDYGRRASIICGGISFLLGAALNAAAAN-------LAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLN 174 (512)
Q Consensus 102 ~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~-------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~ 174 (512)
++|+++||+|||+++...+++..+++++++++.. ++++...|++.|+|.|+.+|.+.+..+|....++||...
T Consensus 103 ~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~i 182 (538)
T KOG0252|consen 103 FFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFI 182 (538)
T ss_pred HHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhcccccee
Confidence 9999999999999999999999999998888632 478899999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcc-----cC--------CCchhHHHHhhHHHHHHHHHHhhccCCChhHHHHcC-CHHHH
Q 010375 175 MMFQLATTLGIFTANMINYGTQK-----LE--------TWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERG-KKVEG 240 (512)
Q Consensus 175 ~~~~~~~~lG~~~~~~~~~~~~~-----~~--------~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~-~~~~~ 240 (512)
+.+.+..+.|.+.|.+++..... .+ ..-||..|.+.++++++.+...+.+|||+++..... +.+++
T Consensus 183 aavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a 262 (538)
T KOG0252|consen 183 AAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQA 262 (538)
T ss_pred EEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhh
Confidence 88877777777777665322211 01 124999999999999999998999999998864333 22333
Q ss_pred HHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccc--hhHHHHHHHHHHHHHhhchhHHHhhHHHHHHhcCCC
Q 010375 241 RRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRN--RPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFK 318 (512)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 318 (512)
.+ +..+....+.+.+ .......+.++..+....+... .-+.++..+..++..-..++....+...+++..|+.
T Consensus 263 ~~---d~~k~~~~~~~~~--~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~ 337 (538)
T KOG0252|consen 263 AG---DMKKVLSVDIEAE--STAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVI 337 (538)
T ss_pred hh---ccccccccccchh--hccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHhhccC
Confidence 21 1111111111111 1111111111222221222112 224456667777777777788888888888888876
Q ss_pred CchhhH--------H-HHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHH
Q 010375 319 GDASLY--------S-SAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILV 389 (512)
Q Consensus 319 ~~~~~~--------~-~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (512)
+..... . ..+.....++|.++...++|++|||+..+.+++++.+..+.+..... + . ......
T Consensus 338 ~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~------~-~--~~~~Gf 408 (538)
T KOG0252|consen 338 PSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYN------Q-L--ENTIGF 408 (538)
T ss_pred CCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcc------c-c--cccCce
Confidence 655443 1 11222233345556667899999999999998888777766655321 1 1 122334
Q ss_pred HHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHh-----hcchhhHHHHHHHHHH
Q 010375 390 VVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLC-----SFKFGIFLFFAGWVTI 464 (512)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~-----~~g~~~~~~~~~~~~~ 464 (512)
.+...+..++...+.+.....+.+|.+|++.|++..|+....+..|++++...+.++.+ ..+....++..+.+..
T Consensus 409 ~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~ 488 (538)
T KOG0252|consen 409 VVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCML 488 (538)
T ss_pred eehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHH
Confidence 44445555555666666778899999999999999999999999999999999999998 5566667777777777
Q ss_pred HHHHHhhccccCCCCCHHHHHHHHh
Q 010375 465 MTIFVYFFLPETKGVPIEEMILLWR 489 (512)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (512)
...+..+++||+++++++|++++.+
T Consensus 489 ~gi~~T~l~pEtk~~~leei~~e~~ 513 (538)
T KOG0252|consen 489 LGILFTLLIPETKGKSLEEISNEEE 513 (538)
T ss_pred HhHheeEEeecccccCHHHhcChhh
Confidence 7888888899999999998865443
|
|
| >PRK03893 putative sialic acid transporter; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-35 Score=290.74 Aligned_cols=401 Identities=15% Similarity=0.165 Sum_probs=271.8
Q ss_pred chHHHHHHHHHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHHhh
Q 010375 24 TPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVA 103 (512)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~ 103 (512)
+++++.....+.++.++++++....++. +|.+.+++ |++..+.+++.+.+.++..+++++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~-----------------~~s~~~~~~~~~~~~~~~~~~~~~~ 75 (496)
T PRK03893 15 NRAQWKAFSAAWLGYLLDGFDFVLITLV--LTEVQGEF-----------------GLTTVQAASLISAAFISRWFGGLLL 75 (496)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHh-----------------CCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455556666678888888888877655 56666655 8899999999999999999999999
Q ss_pred hhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHH
Q 010375 104 SPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTL 183 (512)
Q Consensus 104 g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~l 183 (512)
|+++||+|||+++..+.++.+++.++++++++++.+++.|++.|++.+...+....++.|++|+++|++++++...+..+
T Consensus 76 g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 155 (496)
T PRK03893 76 GAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSI 155 (496)
T ss_pred HHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhccCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHH-HHHH
Q 010375 184 GIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQ-DMVD 262 (512)
Q Consensus 184 G~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 262 (512)
|..+++.+ .....+..+||+.|++.++..++.++....+||++++..++++.++.++..+.....+....... ....
T Consensus 156 g~~~~~~~--~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (496)
T PRK03893 156 GAVVAAQV--YSLVVPVWGWRALFFIGILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAA 233 (496)
T ss_pred HHHHHHHH--HHHHhccCCHHHHHHHHHHHHHHHHHHHHhCCCchhhhhhccccccchhHHHHHhcchhHHHHHHHHHHH
Confidence 99999999 55556678999999886655555444445578877654332222111111111100000000000 0000
Q ss_pred ---H-HHhhcccCcccH-------------HH-h-cccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHH-hcCCCCchh
Q 010375 263 ---A-SELANSIKHPFR-------------NI-L-ERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQ-SMGFKGDAS 322 (512)
Q Consensus 263 ---~-~~~~~~~~~~~~-------------~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~ 322 (512)
. ..........+. .. . .....++.........+...........+.|.+++ ++|++..+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~ 313 (496)
T PRK03893 234 AAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTV 313 (496)
T ss_pred HHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHH
Confidence 0 000000000000 00 0 00111111222222222222222335567888885 689999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhh
Q 010375 323 LYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGW 402 (512)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (512)
+.......++.+++.++.++++||+++|+.+..+..+..+..+.+.... ....+.......+.+ +.+.
T Consensus 314 g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~-~~~~ 381 (496)
T PRK03893 314 ANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIG-----------GANVWVLGLLLFFQQ-MLGQ 381 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhcc-----------ccHHHHHHHHHHHHH-HHhc
Confidence 9999999999999999999999999999988776555444333222210 111111212222111 2222
Q ss_pred cccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHH
Q 010375 403 SWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLF 457 (512)
Q Consensus 403 ~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~ 457 (512)
+..+....++.|.+|++.|++++|+.+....+|+.++|.+.|.+.+..++...+.
T Consensus 382 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~ 436 (496)
T PRK03893 382 GISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALA 436 (496)
T ss_pred ccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHH
Confidence 2233344677899999999999999999999999999999999999988765443
|
|
| >PRK15075 citrate-proton symporter; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-34 Score=278.83 Aligned_cols=360 Identities=20% Similarity=0.237 Sum_probs=242.2
Q ss_pred HHHHHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHH-HHH-----HHHHHHHHHhh
Q 010375 30 ACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFT-SSL-----YLAGLVASFVA 103 (512)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~-s~~-----~l~~~i~~~~~ 103 (512)
....++++.+++++|...++.. .|.+.+++ +.++.+.+.+. +.. .++..+++++.
T Consensus 16 ~~~~~~~~~~~~~~d~~~~~~~--~~~i~~~~-----------------~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~ 76 (434)
T PRK15075 16 AILRVTSGNFLEMFDFFLFGFY--ATAIAKTF-----------------FPAGNEFASLMLTFAVFGAGFLMRPLGAIVL 76 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--HHHHHHHh-----------------CCCCCchHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 5666788999999999998877 67777776 55666554432 222 23335789999
Q ss_pred hhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHH--------HHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHH
Q 010375 104 SPVTRDYGRRASIICGGISFLLGAALNAAAANLA--------MLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNM 175 (512)
Q Consensus 104 g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~ 175 (512)
|+++||+|||++++.+.+++.+++++++++++++ .++++|+++|++.+...+....+++|++|+++|+++++
T Consensus 77 G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~ 156 (434)
T PRK15075 77 GAYIDRVGRRKGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTS 156 (434)
T ss_pred HHHhhhhchHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHH
Confidence 9999999999999999999999999999999987 46889999999999999989999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcc------cCCCchhHHHHhhHHHHHHHHHHhhccCCChhHHHHcCCHHHHHHHHHHHcC
Q 010375 176 MFQLATTLGIFTANMINYGTQK------LETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRG 249 (512)
Q Consensus 176 ~~~~~~~lG~~~~~~~~~~~~~------~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~ 249 (512)
+...+..+|..+++.++..... .+..|||++|++..+...+........||++++..++
T Consensus 157 ~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~--------------- 221 (434)
T PRK15075 157 WQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFIFLIRRSLEETEEFLARK--------------- 221 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhh---------------
Confidence 9998888888877776433211 2457999999986544333222222344543211000
Q ss_pred CchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHh-cCCCCchhhHHHHH
Q 010375 250 TKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAM 328 (512)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~ 328 (512)
.+.+.+..++...+ .++......+..+.....+.....|.|.++++ +|++..+.++....
T Consensus 222 ----------------~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~ 282 (434)
T PRK15075 222 ----------------HRPSMREIFRSLAA---NWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLC 282 (434)
T ss_pred ----------------hccccccHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 00000111111111 11122222222333344556778889998876 89998888888888
Q ss_pred HHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhccccee
Q 010375 329 TGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLG 408 (512)
Q Consensus 329 ~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (512)
..++.+++.++.|+++||++||+.+..+..+..+.......... .............+.+.+.+. ..+..
T Consensus 283 ~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~g~-~~~~~ 352 (434)
T PRK15075 283 VGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLV---------AAPSFARMLAVELWLSFLYGS-YNGAM 352 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH---------cCCchHHHHHHHHHHHHHHHH-HHhhH
Confidence 88999999999999999999999877654443222111111110 001111111212222233332 22333
Q ss_pred eeeecccCChhhhhhHHHHHHHHHHH-HHHHHHHHHHHHHhhcch
Q 010375 409 WTVPSEIFPLETRSAGQSITVAVNLF-FTFVIAQIFLTLLCSFKF 452 (512)
Q Consensus 409 ~~~~~~~~p~~~~~~~~g~~~~~~~~-g~~~~~~~~~~~~~~~g~ 452 (512)
+.+..|.+|++.|+++.++.+..... ++.++|.+.+.+.|..++
T Consensus 353 ~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~ 397 (434)
T PRK15075 353 VVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGD 397 (434)
T ss_pred HHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCC
Confidence 46678999999999999997666554 588899999999998874
|
|
| >PRK09705 cynX putative cyanate transporter; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-34 Score=274.56 Aligned_cols=343 Identities=14% Similarity=0.065 Sum_probs=247.0
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhh
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVP 158 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 158 (512)
|+|..+.|++.+.+.+++.+++++.|+++||+|||+++..+..+++++.+++++++|++.++++|+++|++.+...+...
T Consensus 40 ~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~ 119 (393)
T PRK09705 40 GMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGVGIGIIQAVMP 119 (393)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhh
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCC-CchhHHHHhhHHHHHHHHHHhhcc-CCChhHHHHcCC
Q 010375 159 LYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLET-WGWRLSLGLAAAPALMMTVGGILL-PETPNSLIERGK 236 (512)
Q Consensus 159 ~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~-~~Wr~~f~~~~~~~~~~~~~~~~~-~e~p~~l~~~~~ 236 (512)
.++.+++| ++|+++++++..+..+|..+++.++ ....++ .+||+.+.+.++..++..+..+.. ++.|+ +
T Consensus 120 ~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~--~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-- 190 (393)
T PRK09705 120 SVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAIT--PWLVQHSETWYQTLAWWALPAVVALFAWWWQSAREVA----S-- 190 (393)
T ss_pred HHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHH--HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCc----c--
Confidence 99999997 7899999999999999999998883 333344 389999877666655444333332 22220 0
Q ss_pred HHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHhcC
Q 010375 237 KVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMG 316 (512)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 316 (512)
+ +++ +.+.++.++++. .+...+..+.....+.....+.|.+++++|
T Consensus 191 -~----------------------------~~~-~~~~~~~l~~~~----~~~l~~~~~~~~~~~~~~~~~lp~~l~~~g 236 (393)
T PRK09705 191 -S----------------------------HKT-TTTPVRVVFTPR----AWTLGVYFGLINGGYASLIAWLPAFYIEIG 236 (393)
T ss_pred -c----------------------------cCC-CcCCcccccCHh----HHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 0 000 001112222222 222223333334455677788888888899
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHH
Q 010375 317 FKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLF 396 (512)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (512)
++..+++......+++.++++++.+++.||+++|+....+..+..++..++.... .. .... ...+.
T Consensus 237 ~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~-----------~~-~~~~--~~~l~ 302 (393)
T PRK09705 237 ASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLP-----------LQ-LPVL--WAMVC 302 (393)
T ss_pred CChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHcc-----------ch-HHHH--HHHHH
Confidence 9999999999999999999999999999999999888887666655554433211 11 1111 12233
Q ss_pred HHHhhhcccceeeeeecccC-ChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-hhhHHHHHHHHHHHHHH-Hhhcc
Q 010375 397 VLAFGWSWGPLGWTVPSEIF-PLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK-FGIFLFFAGWVTIMTIF-VYFFL 473 (512)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~-~~~~~ 473 (512)
+.+.+... +.......+.. |++.+++..|+.+...++++.++|.+.|++.|+.| +...+.+..++.+...+ ...+.
T Consensus 303 g~g~g~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (393)
T PRK09705 303 GLGLGGAF-PLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFA 381 (393)
T ss_pred HHhccchH-HHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhc
Confidence 33433332 22233344555 56789999999999999999999999999999887 55545554444443333 34555
Q ss_pred ccCCCC
Q 010375 474 PETKGV 479 (512)
Q Consensus 474 ~~~~~~ 479 (512)
||++++
T Consensus 382 ~~~~~~ 387 (393)
T PRK09705 382 PARFPQ 387 (393)
T ss_pred cccccc
Confidence 665543
|
|
| >PRK14995 methyl viologen resistance protein SmvA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=285.89 Aligned_cols=388 Identities=11% Similarity=-0.019 Sum_probs=280.5
Q ss_pred HHHHHHHHHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHHhhhh
Q 010375 26 SVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASP 105 (512)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~ 105 (512)
|+|..+..++++.++...|.++++.+ +|.+.+++ |.+..+.+|+.+.|.++..++.+++|+
T Consensus 3 ~~~~~~~~~~~~~~~~~ld~tiv~~a--~p~i~~~l-----------------~~s~~~~~~~~~~~~l~~~~~~~~~G~ 63 (495)
T PRK14995 3 RQWLTLVIIVLVYIPVAIDATVLHVA--APTLSMTL-----------------GASGNELLWIIDIYSLVMAGMVLPMGA 63 (495)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHh-----------------CCCHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677788889999999999999877 78887777 889999999999999999999999999
Q ss_pred hhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhhhhhcC-CCCCchhHHHHHHHHHHHH
Q 010375 106 VTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMA-PTHLRGGLNMMFQLATTLG 184 (512)
Q Consensus 106 l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~lG 184 (512)
++||+|||++++.+.+++.++++++++++|++.++++|+++|++.+...+.....+.+.+ |+++|++++++......+|
T Consensus 64 l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g 143 (495)
T PRK14995 64 LGDRIGFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGG 143 (495)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998888888887776 6789999999999999999
Q ss_pred HHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHh-hccCCChhHHHHcCCHHHHHH----------HHHHHcCCchh
Q 010375 185 IFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGG-ILLPETPNSLIERGKKVEGRR----------VLEKIRGTKEV 253 (512)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~-~~~~e~p~~l~~~~~~~~~~~----------~~~~~~~~~~~ 253 (512)
..+||.+ ++...++.+|||.|++...++++..++. +++||+|+...++.+...... ..+........
T Consensus 144 ~~~gp~l--gg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~ 221 (495)
T PRK14995 144 AAFGPLV--GGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLS 221 (495)
T ss_pred HHHHHHH--HHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCc
Confidence 9999999 6677778899999999887777665554 447776531111111111000 00000000000
Q ss_pred hHHHHH--------HHHHHHhhcccCccc--HHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHh-cCCCCchh
Q 010375 254 NAEYQD--------MVDASELANSIKHPF--RNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS-MGFKGDAS 322 (512)
Q Consensus 254 ~~~~~~--------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~ 322 (512)
...... .......+.+.+.+. .++++++.. ....+..+.....+....++.|.+++. +|+++.++
T Consensus 222 ~~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~~~lf~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~a 297 (495)
T PRK14995 222 LWVTSLTLLTGALLLGLFIRTQLAASRPMIDMRLFTHRII----LSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEA 297 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHhCCccc----HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 000000 000000111112222 345554442 222233333333445566778888776 89999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhh
Q 010375 323 LYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGW 402 (512)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (512)
+....+..++..++.++.|++.||+++|+.+..+..+..++..++.... .....+.......+.+.+.+.
T Consensus 298 g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~----------~~~~~~~~~~~~~l~G~g~g~ 367 (495)
T PRK14995 298 GMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTD----------FSTQQWQAWGLMALLGFSAAS 367 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhc----------CCCchHHHHHHHHHHHHhHHH
Confidence 9999999999999999999999999999888877776666655444321 011123334445555666665
Q ss_pred cccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 010375 403 SWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCS 449 (512)
Q Consensus 403 ~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~ 449 (512)
...+. .....+..|+++++.+.++.++...+|+.+++.+.+.+.++
T Consensus 368 ~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 368 ALLAS-TSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred HHHHH-HHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444 35556788999999999999999999999999999988764
|
|
| >TIGR00903 2A0129 major facilitator 4 family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=273.74 Aligned_cols=333 Identities=14% Similarity=0.062 Sum_probs=225.4
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhh
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVP 158 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 158 (512)
|+|..+.|++.+.+.+++.+++++.|+++||+|||+++..+......+.+.....+|++.+++.|+++|++.+. .+...
T Consensus 22 ~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~~~-~~~~~ 100 (368)
T TIGR00903 22 DVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAALGQPF-LLNAF 100 (368)
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhHhHH-HHHHH
Confidence 89999999999999999999999999999999999987766555545443333347999999999999999986 45666
Q ss_pred hhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHh-hccCCChhHHHHcCCH
Q 010375 159 LYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGG-ILLPETPNSLIERGKK 237 (512)
Q Consensus 159 ~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~-~~~~e~p~~l~~~~~~ 237 (512)
..++|++|+++|++++++...+..+|.++++++ .....+..|||+.|++.++++++..+++ +++||+|++.. +.
T Consensus 101 ~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~--~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~~~---~~ 175 (368)
T TIGR00903 101 APAASQIREERRDLVISLLSFAMYLGIIFALAA--GLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALPFQAA---EG 175 (368)
T ss_pred HHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC---CC
Confidence 677999999999999999999999999999998 4555567899999999888877665544 45899885421 00
Q ss_pred HHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHhcCC
Q 010375 238 VEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGF 317 (512)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 317 (512)
.+ . ++. ..+++++++++. ++...+..++....++.+..|.|.++++.|+
T Consensus 176 ~~---------------~--~~~----------~~~~~~ll~~~~----~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~ 224 (368)
T TIGR00903 176 FG---------------F--KDA----------VKEFGALAGRKD----LWIIGAILGFGVALFDNLAIWLEAALRPAGL 224 (368)
T ss_pred cc---------------h--HHH----------HHHHHHHHcChh----HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 00 0 000 012455665544 3445555666666677888999999988888
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHhhcCCh---hHHHH-hhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHH
Q 010375 318 KGDASLYSSAMTGAVLASSTLISIATVDKLGRR---ALLIS-GGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVI 393 (512)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (512)
+.. .+.......+.+.++ .++++||..|| +.... ...+.++....+... ......+...
T Consensus 225 s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~-------------~~~~~~~~~~ 287 (368)
T TIGR00903 225 EDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFE-------------LNRLALFAFI 287 (368)
T ss_pred ChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHc-------------cccHHHHHHH
Confidence 754 455555555544444 46777776543 33222 222222222221111 1112223233
Q ss_pred HHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcch-hhHHHHHHHHHHHHHH
Q 010375 394 CLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKF-GIFLFFAGWVTIMTIF 468 (512)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~ 468 (512)
++.+++.... .+..+.+.+|.+|++.|+++.|+.+..+++++..+|.+.+.+.. +. ..+..++....+..+.
T Consensus 288 ~l~~~~~~~~-~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~ 360 (368)
T TIGR00903 288 GIAGLLMLPA-YAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAI 360 (368)
T ss_pred HHHHHhhhhh-HHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHH
Confidence 3333332222 23345788899999999999999999999999999999988773 42 3344444444443333
|
This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix. |
| >TIGR00895 2A0115 benzoate transport | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=274.01 Aligned_cols=385 Identities=17% Similarity=0.219 Sum_probs=269.8
Q ss_pred chHHHHHHHHHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHHhh
Q 010375 24 TPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVA 103 (512)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~ 103 (512)
+++.+.....+.+..+..+++....+.. .|.+.+++ |.+..+.+++.+.+.++..+++++.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (398)
T TIGR00895 12 SRYQWRAIILSFLIMLMDGYDLAAMGFA--APAISAEW-----------------GLDPVQLGFLFSAGLIGMAFGALFF 72 (398)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhh--HHHHhhcc-----------------CCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344555555566667777777665544 45554444 8899999999999999999999999
Q ss_pred hhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHH
Q 010375 104 SPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTL 183 (512)
Q Consensus 104 g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~l 183 (512)
|+++||+|||+++..+.++..++.+++.++++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+
T Consensus 73 g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 152 (398)
T TIGR00895 73 GPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPI 152 (398)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHH-HhhccCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHH
Q 010375 184 GIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTV-GGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVD 262 (512)
Q Consensus 184 G~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~-~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (512)
|..+++.+ .....+..+||+.|++.++..++..+ ...++||++++..++ +.++..+..++.......+.+. +..+
T Consensus 153 g~~~~~~~--~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~ 228 (398)
T TIGR00895 153 GAAVGGFL--AGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSK-RPETVRRIVNAIAPQMQAEAQS-ALPE 228 (398)
T ss_pred HHHHHHHH--HHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhc-CHHHHHHHHHHHHHhccccccc-cccc
Confidence 99999998 55556677999999988765555444 445689988765554 3333333222221111000000 0000
Q ss_pred HHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHH
Q 010375 263 ASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIA 342 (512)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~ 342 (512)
....++..+...+.+++.+..+.. ....+..+.....+.....+.|.+.++.|+++.+.+.......++.+++.++.++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (398)
T TIGR00895 229 QKATQGTKRSVFKALFQGKTARIT-VLLWLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGW 307 (398)
T ss_pred cccccchhhHHHHHHhcchhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000011112223333322222 2223333344445566777888888889999999999999999999999999999
Q ss_pred HHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhh
Q 010375 343 TVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRS 422 (512)
Q Consensus 343 l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 422 (512)
+.||+++|+... ...+..+...++.... ...+......++.+.+.+... +....+..|.+|++.|+
T Consensus 308 l~~~~~~~~~~~-~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~g 373 (398)
T TIGR00895 308 LADRLGPRVTAL-LLLLGAVFAVLVGSTL------------FSPTLLLLLGAIAGFFVNGGQ-SGLYALMALFYPTAIRA 373 (398)
T ss_pred HHhhcchHHHHH-HHHHHHHHHHHHHHHh------------hCHHHHHHHHHHHHHHHHHHH-HHHHHHHhhcCCHHHHH
Confidence 999999984433 3333333322222211 112333444455555555343 34467888999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH
Q 010375 423 AGQSITVAVNLFFTFVIAQIFLTL 446 (512)
Q Consensus 423 ~~~g~~~~~~~~g~~~~~~~~~~~ 446 (512)
++.|+.+....+|..++|.+.|.+
T Consensus 374 ~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 374 TGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHhc
Confidence 999999999999999999998865
|
|
| >PRK10213 nepI ribonucleoside transporter; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-33 Score=266.68 Aligned_cols=329 Identities=18% Similarity=0.144 Sum_probs=239.2
Q ss_pred cccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchh
Q 010375 78 CKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAV 157 (512)
Q Consensus 78 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 157 (512)
+|+++++.++..+.+.++..+++++.|+++||+|||+++..+.++.+++.++++++++++.+++.|+++|++.+...+..
T Consensus 50 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~ 129 (394)
T PRK10213 50 LGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMS 129 (394)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHH
Confidence 38999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhh-ccCCChhHHHHcCC
Q 010375 158 PLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGI-LLPETPNSLIERGK 236 (512)
Q Consensus 158 ~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~-~~~e~p~~l~~~~~ 236 (512)
.+++.|++|+++|++++++...+.++|.+++|++ +....+..+||+.|++.++++++..+... ..||+|++ +
T Consensus 130 ~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l--~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~~----~- 202 (394)
T PRK10213 130 ASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPL--GSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPGE----P- 202 (394)
T ss_pred HHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCCcc----c-
Confidence 9999999999999999999999999999999999 55666677999999998877766554443 36765410 0
Q ss_pred HHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhh-HHHHHHhc
Q 010375 237 KVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFY-APVLFQSM 315 (512)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 315 (512)
+ +...+.++.++++..+. ..+..+...........+ .|.+.+++
T Consensus 203 -~------------------------------~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~p~~~~~~ 247 (394)
T PRK10213 203 -S------------------------------HQKQNTFRLLQRPGVMA----GMIAIFMSFAGQFAFFTYIRPVYMNLA 247 (394)
T ss_pred -c------------------------------cchhHHHHHhcCHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 0 00011223343333222 212222222222333334 57777778
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHH
Q 010375 316 GFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICL 395 (512)
Q Consensus 316 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (512)
|+++.+.+......+++.+++.++.+++.||.+ |+.+..+..+.......+.... +..+.......+
T Consensus 248 g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~~~------------~~~~~~~~~~~l 314 (394)
T PRK10213 248 GFGVDGLTLVLLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLTLWG------------SDKIVATGVAII 314 (394)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHHh------------hhHHHHHHHHHH
Confidence 999999999999999999999999999999954 4443333333233322222211 123344444555
Q ss_pred HHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHH
Q 010375 396 FVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVT 463 (512)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 463 (512)
.+.+++... +.....+.+..| ++++.+.+......++|..+++.+.|.+.|..|+...+...++..
T Consensus 315 ~G~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~ 380 (394)
T PRK10213 315 WGLTFALVP-VGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLM 380 (394)
T ss_pred HHHHHHhhh-HHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHH
Confidence 555554333 332345566676 446677777888889999999999999999888766665555433
|
|
| >TIGR00890 2A0111 Oxalate/Formate Antiporter | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-34 Score=274.34 Aligned_cols=340 Identities=17% Similarity=0.133 Sum_probs=248.3
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhh
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVP 158 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 158 (512)
|++..+.|++.+.+.+++.++++++|+++||+|||+++..+.++.+++.+++++++|++.++++|++.|++.+...+...
T Consensus 34 ~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 113 (377)
T TIGR00890 34 GVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLASAGVGIAYGIAL 113 (377)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999998888888
Q ss_pred hhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhc-cCCChhHHHHcCCH
Q 010375 159 LYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGIL-LPETPNSLIERGKK 237 (512)
Q Consensus 159 ~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~-~~e~p~~l~~~~~~ 237 (512)
..+.|++| ++|+++.++...+.++|..+++++ .....+..+||+.|++.++++++..+..++ ++|+|+.. .+++
T Consensus 114 ~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~- 188 (377)
T TIGR00890 114 NTAVKWFP-DKRGLASGIIIGGYGLGSFILSPL--ITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQL-IKTN- 188 (377)
T ss_pred HHHHHHcC-cccHHHHHHHHHhcchhHhHHHHH--HHHHHhcccHHHHHHHHHHHHHHHHHHHHHheecCchhc-cccC-
Confidence 88999986 679999999999999998876665 233344568999999999888777665544 55443210 0000
Q ss_pred HHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHhcCC
Q 010375 238 VEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGF 317 (512)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 317 (512)
++. ++.+.+.++.++++..+. ..+..+...........+.+.+.+++|.
T Consensus 189 -------------~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (377)
T TIGR00890 189 -------------IEV--------------SVKDYTVWEMLRTPQFWV----LYLSFFLNAVSGLLLIGLYKPYGQSLGL 237 (377)
T ss_pred -------------ccc--------------chhhhhHHHHHcCccHHH----HHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence 000 000112233444443222 2222222222223334455556677888
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHH
Q 010375 318 KGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFV 397 (512)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (512)
+..+.+.......++.++++++.+++.||++||+.+..+..+..++...+.... ............+.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~g 306 (377)
T TIGR00890 238 SDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIP-----------MLNDVLFLATVALVF 306 (377)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcc-----------cchhHHHHHHHHHHH
Confidence 888888899999999999999999999999999988887777666655544321 111122222233344
Q ss_pred HHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHH
Q 010375 398 LAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMT 466 (512)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 466 (512)
.+.+... +....+..|.+|+++|+++.|+.+....+|..++|.+.|.+.+..++...+.+.+++.+++
T Consensus 307 ~~~g~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 307 FTWGGTI-SLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHhccch-hccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 4443222 3334667899999999999999999999999999999999999888877666655554443
|
|
| >PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-33 Score=273.50 Aligned_cols=370 Identities=14% Similarity=0.073 Sum_probs=243.4
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhc----hHHHHHHHHHHHhhhhhhcc
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAA----NLAMLLTGRILLGVGIGFGN 154 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~----~~~~l~~~r~l~G~~~~~~~ 154 (512)
|++..+.+++.+.+.+++.++++++|+++||+|||++++.+.++.+++.+++++++ +++.+++.|++.|++.+...
T Consensus 59 g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~ 138 (452)
T PRK11273 59 GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGW 138 (452)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccc
Confidence 77999999999999999999999999999999999999999999999999888763 78889999999999999888
Q ss_pred chhhhhhhhcCCCCCchhHHHHHHHHHHHHHH-HHHHHHHhhcccCCCchhHHHHhhHHHHHHHHH-HhhccCCChhHHH
Q 010375 155 QAVPLYLSEMAPTHLRGGLNMMFQLATTLGIF-TANMINYGTQKLETWGWRLSLGLAAAPALMMTV-GGILLPETPNSLI 232 (512)
Q Consensus 155 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~-~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~-~~~~~~e~p~~l~ 232 (512)
+.....+.|++|+++|+++++++..+.++|.. .++++..... ...+||+.|++.++++++..+ ..+++||+|+...
T Consensus 139 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~--~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~ 216 (452)
T PRK11273 139 PPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMA--WFNDWHAALYMPAFAAILVALFAFAMMRDTPQSCG 216 (452)
T ss_pred hHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH--HhccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcC
Confidence 88888899999999999999999999999864 4555422222 224899999998887776544 4455788875311
Q ss_pred HcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHH-----HhcccchhHHHHHHHHHHHHHhhchhHHHhh
Q 010375 233 ERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRN-----ILERRNRPQLVMAIFMPMFQILTGINSILFY 307 (512)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (512)
.+ +.++.++ + .. .+. +..++.+.+.++ +++++. ++...+..++.....+....|
T Consensus 217 ~~-~~~~~~~---~---~~---~~~-------~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~ 275 (452)
T PRK11273 217 LP-PIEEYKN---D---YP---DDY-------NEKHEQELTAKQIFMQYVLPNKL----LWYIAIANVFVYLLRYGILDW 275 (452)
T ss_pred CC-Chhhhhh---c---cc---ccc-------ccccCCCccHHHHHHHHHHcChH----HHHHHHHHHHHHHHHHHHHHH
Confidence 11 1111000 0 00 000 000001111222 222222 333333333333344566778
Q ss_pred HHHHHHh-cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhc--CChhHHH-HhhHHHHHHHHHHHHHHhhccCCCccccc
Q 010375 308 APVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKL--GRRALLI-SGGIQMITCQVIVSIILGLKFGPNQELSK 383 (512)
Q Consensus 308 ~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~--~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (512)
.|.++++ .|++..+++.......++.+++.++.|+++||+ +||+... ....+..++...+... ..
T Consensus 276 ~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~-----------~~ 344 (452)
T PRK11273 276 SPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLN-----------PA 344 (452)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHh-----------cc
Confidence 8998876 789888888888888899999999999999999 4443322 2222222222221111 00
Q ss_pred chhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHH-HHHHHHHHHhhcchhhHHHHHHHH
Q 010375 384 SFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFV-IAQIFLTLLCSFKFGIFLFFAGWV 462 (512)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~-~~~~~~~~~~~~g~~~~~~~~~~~ 462 (512)
...+.........+.... +.......+..|.+|++.|+++.|+.+...++|+.+ +|.+.|.+.|+.++...+...+.+
T Consensus 345 ~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~ 423 (452)
T PRK11273 345 GNPTVDMACMIVIGFLIY-GPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGG 423 (452)
T ss_pred cChHHHHHHHHHHHHHHH-hHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHH
Confidence 111122222222222211 111111234569999999999999999999998765 799999999999887766655555
Q ss_pred HHHHHHHhhccccCCCCCHHH
Q 010375 463 TIMTIFVYFFLPETKGVPIEE 483 (512)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~ 483 (512)
.+++++....+...++|+.||
T Consensus 424 ~~~~~~~~~~~~~~~~~~~~~ 444 (452)
T PRK11273 424 SILAVILLIVVMIGEKRHHEE 444 (452)
T ss_pred HHHHHHHHHHHhccccchHHH
Confidence 555555555444444444443
|
|
| >PLN00028 nitrate transmembrane transporter; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=275.92 Aligned_cols=355 Identities=12% Similarity=0.046 Sum_probs=226.1
Q ss_pred cccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchh
Q 010375 78 CKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAV 157 (512)
Q Consensus 78 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 157 (512)
+|++..+.+++.+.+.+++.+++++.|+++||+|||+++..+.++++++.++++++++++.++++|+++|++.+.. +..
T Consensus 66 ~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~-~~~ 144 (476)
T PLN00028 66 LNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSLATF-VSC 144 (476)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhh-HHH
Confidence 3899999999999999999999999999999999999999999999999999999999999999999999988765 445
Q ss_pred hhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhh--c-----ccCCCchhHHHHhhHHHHHHHHHHhhccC-CChh
Q 010375 158 PLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGT--Q-----KLETWGWRLSLGLAAAPALMMTVGGILLP-ETPN 229 (512)
Q Consensus 158 ~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~--~-----~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~-e~p~ 229 (512)
..+++|++|+++|++++++.....++|..+++.+.... . ..+..|||+.|++.++++++..+..++++ +.|+
T Consensus 145 ~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~ 224 (476)
T PLN00028 145 QYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPD 224 (476)
T ss_pred HHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCC
Confidence 66889999999999999999877777776665543111 0 01125899999999988877766655544 3331
Q ss_pred HHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHH
Q 010375 230 SLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAP 309 (512)
Q Consensus 230 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (512)
++.++.++ +. ..++.+....+++.++++. .+...+..+...........+.|
T Consensus 225 -----~~~~~~~~-------~~------------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~p 276 (476)
T PLN00028 225 -----GNYRELKK-------SG------------TMPKDSFSKVLRYGVTNYR----TWILALTYGYSFGVELTMDNIIA 276 (476)
T ss_pred -----CchhhHHh-------cC------------ccccccHHHHHHHHHcCch----hHHHHHHHHHHHHHHHHHHhHHH
Confidence 11000000 00 0000000011223333333 22222222223333344556677
Q ss_pred HHHHh-cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhH----HHHhhHHHHHHHHHHHHHHhhccCCCcccccc
Q 010375 310 VLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRAL----LISGGIQMITCQVIVSIILGLKFGPNQELSKS 384 (512)
Q Consensus 310 ~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (512)
.++.+ +|+++.+++.......++.++++++.|+++||++||+. .........+..+.+..... . .
T Consensus 277 ~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~---------~-~ 346 (476)
T PLN00028 277 EYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGR---------A-N 346 (476)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcc---------c-c
Confidence 77654 79999999999999999999999999999999986521 11111111111111111100 0 1
Q ss_pred hhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHH
Q 010375 385 FSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTI 464 (512)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 464 (512)
..+..+..+++++.+...... ..+.+..+.. ++.++++.|+.+..+.+|++++|.+.+ ..+..+|...+.+.+++.+
T Consensus 347 ~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~ 423 (476)
T PLN00028 347 SLGAAIVVMILFSIFVQAACG-ATFGIVPFVS-RRSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMII 423 (476)
T ss_pred hHHHHHHHHHHHHHHHHHhhh-hhcccCcccC-hhhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHH
Confidence 122223333333333332222 2345555654 478999999998888888888777654 1122346556666666666
Q ss_pred HHHHHhhccc
Q 010375 465 MTIFVYFFLP 474 (512)
Q Consensus 465 ~~~~~~~~~~ 474 (512)
++.++.++.+
T Consensus 424 i~~~~~~~~~ 433 (476)
T PLN00028 424 ACTLPVAFIH 433 (476)
T ss_pred HHHHHHHhee
Confidence 6666665554
|
|
| >PRK10091 MFS transport protein AraJ; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-33 Score=265.93 Aligned_cols=361 Identities=13% Similarity=0.097 Sum_probs=249.9
Q ss_pred HHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhH
Q 010375 35 AIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRA 114 (512)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~ 114 (512)
.++.+..+.......+. +|.+.+++ |++.++.|++.+.+.+++.++++++|+++||+|||+
T Consensus 9 ~~~~~~~~~~~~~~~~~--l~~~~~~~-----------------g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~ 69 (382)
T PRK10091 9 ALGTFGLGMAEFGIMGV--LTELAHDV-----------------GISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKH 69 (382)
T ss_pred HHHHHHHHhhHHHHHhC--hHHHHHHc-----------------CCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHH
Confidence 34444555555555544 56666665 889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHh
Q 010375 115 SIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYG 194 (512)
Q Consensus 115 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~ 194 (512)
++..+.++.+++.+++++++|++.+++.|+++|++.+...+....++.|++++++|++++++...+..+|..+++++ +
T Consensus 70 ~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l--~ 147 (382)
T PRK10091 70 ILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPL--G 147 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccH--H
Confidence 99999999999999999999999999999999999998888888899999999999999999999999999999998 4
Q ss_pred hcccCCCchhHHHHhhHHHHHHHHHHh-hccCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcc
Q 010375 195 TQKLETWGWRLSLGLAAAPALMMTVGG-ILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHP 273 (512)
Q Consensus 195 ~~~~~~~~Wr~~f~~~~~~~~~~~~~~-~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (512)
....+..+||+.|++.++..++..+.. .++||.++ +.+.+ . +..
T Consensus 148 ~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~----~~~~~------------------~-------------~~~ 192 (382)
T PRK10091 148 TYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIRD----EAKGG------------------L-------------REQ 192 (382)
T ss_pred HHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCCc----ccccC------------------H-------------HHH
Confidence 555566799999999888776665543 44777541 00000 0 000
Q ss_pred cHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhH-HHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhH
Q 010375 274 FRNILERRNRPQLVMAIFMPMFQILTGINSILFYA-PVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRAL 352 (512)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~ 352 (512)
+ +.++++.. +......+...........+. |++.+.+|+++.+.+......+++.++++++.+++.||+++|+.
T Consensus 193 ~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~ 267 (382)
T PRK10091 193 F-HFLRSPAP----WLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRI 267 (382)
T ss_pred H-HHhcChHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhH
Confidence 1 11222221 111111112112222223344 44444589999999999999999999999999999999999998
Q ss_pred HHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHH
Q 010375 353 LISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVN 432 (512)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~ 432 (512)
+..+..+..++.+++.... +..+.......+.+.+......+.......+..|++.++.+ ..+...
T Consensus 268 ~~~~~~~~~i~~~~~~~~~------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 333 (382)
T PRK10091 268 AAVTDFIIVLALLMLFFFG------------GMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAF 333 (382)
T ss_pred HHHHHHHHHHHHHHHHHHH------------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHH
Confidence 8887776666654443321 11222222333333332222222222333444455555544 346778
Q ss_pred HHHHHHHHHHHHHHHhh-cchhhHHHHHHHHHHHHHHHh
Q 010375 433 LFFTFVIAQIFLTLLCS-FKFGIFLFFAGWVTIMTIFVY 470 (512)
Q Consensus 433 ~~g~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~ 470 (512)
.+|.+++|.+.|.+.|. .++...+...++..++.+.+.
T Consensus 334 ~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (382)
T PRK10091 334 NLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSL 372 (382)
T ss_pred HHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHH
Confidence 89999999999999996 456666665544444444333
|
|
| >TIGR00892 2A0113 monocarboxylate transporter 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-34 Score=277.59 Aligned_cols=361 Identities=15% Similarity=0.150 Sum_probs=240.7
Q ss_pred cccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHH-HHHHHhhhhhhccch
Q 010375 78 CKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLT-GRILLGVGIGFGNQA 156 (512)
Q Consensus 78 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~r~l~G~~~~~~~~~ 156 (512)
+|++.++.+++.+.+.++..++.+++|+++||+|||++++.+.++.++++++++++++++.+++ .|+++|++.+...+.
T Consensus 49 ~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~ 128 (455)
T TIGR00892 49 FQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQP 128 (455)
T ss_pred hCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhH
Confidence 3899999999999999999999999999999999999999999999999999999999998875 579999999887777
Q ss_pred hhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhcc-CCChhHHHHcC
Q 010375 157 VPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILL-PETPNSLIERG 235 (512)
Q Consensus 157 ~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~-~e~p~~l~~~~ 235 (512)
...++.++++ ++|+++.++...+..+|..++|.+ .....+..|||+.|++.+++.++..+..+++ ++.+.. ++.
T Consensus 129 ~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l--~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~--~~~ 203 (455)
T TIGR00892 129 SLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPL--NQYLFESFGWRGSFLILGGLLLHCCVCGALMRPVGPSQ--RVS 203 (455)
T ss_pred HHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHH--HHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCCCccc--ccc
Confidence 8888899995 789999999999999999999998 4555566799999999988877665554443 322210 000
Q ss_pred CHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHhc
Q 010375 236 KKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSM 315 (512)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (512)
+.++ . +........+ +.+ . .....+..+..+ .+.++++. ++......+.....+.....+.|.+.++.
T Consensus 204 ~~~~-~---~~~~~~~~~~-~~~-~-~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ 271 (455)
T TIGR00892 204 KSKS-K---EGLPPDGSTK-KLS-K-KSTAEKINRFLD-FSLFTHRG----FLVYLSGNVIMFLGFFAPIIFLVPYAKDK 271 (455)
T ss_pred cccc-c---ccCCCCCccc-ccc-c-cchhhhhhhhcc-hHHhcCch----HHHHHHHHHHHHHHccchHHHHHHHHHHc
Confidence 0000 0 0000000000 000 0 000000000011 13444443 22233333333334445566777777888
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHhhc--CChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHH
Q 010375 316 GFKGDASLYSSAMTGAVLASSTLISIATVDKL--GRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVI 393 (512)
Q Consensus 316 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~--~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (512)
|++..+++...++.+++.++++++.+++.||. ++|+...........+...+.... . +..+..+...
T Consensus 272 g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~----------~-~~~~~~~i~~ 340 (455)
T TIGR00892 272 GVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCAL----------A-GDYTGLVIYC 340 (455)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHH----------h-chHHHHHHHH
Confidence 99999999999999999999999999999974 334333332222222221111111 0 1223334444
Q ss_pred HHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-hhhHHHHHHHHHHHHH
Q 010375 394 CLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK-FGIFLFFAGWVTIMTI 467 (512)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~ 467 (512)
.+.+.+.+.. .+....++.|.+|+++++++.|+.+....+|.+++|.+.|.+.+..+ +...+.+.++..+++.
T Consensus 341 ~~~G~~~g~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~ 414 (455)
T TIGR00892 341 IFFGLSFGSV-GALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAG 414 (455)
T ss_pred HHHHHHhchH-HHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHH
Confidence 5555554433 33445677899999999999999999999999999999999998774 6555555444444333
|
|
| >TIGR00893 2A0114 d-galactonate transporter | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=273.53 Aligned_cols=367 Identities=14% Similarity=0.166 Sum_probs=255.5
Q ss_pred cccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchh
Q 010375 78 CKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAV 157 (512)
Q Consensus 78 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 157 (512)
+|++..+.+++.+.+.++..++++++|+++||+|||+++..+.++.+++.++++++++++.++++|++.|++.+...+..
T Consensus 24 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 103 (399)
T TIGR00893 24 LGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAAEAPFFPGI 103 (399)
T ss_pred hCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhhhhHH
Confidence 48899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhc-cCCChhHHHHcCC
Q 010375 158 PLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGIL-LPETPNSLIERGK 236 (512)
Q Consensus 158 ~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~-~~e~p~~l~~~~~ 236 (512)
..++.|++|+++|++++++......+|.++++.+ .....+..+||+.|++.+++.++..+..++ .||+|+... +.+
T Consensus 104 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 180 (399)
T TIGR00893 104 ILIVASWFPASERATAVSIFNSAQGLGGIIGGPL--VGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKAK-WLT 180 (399)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHH--HHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCCCCccc-cCC
Confidence 9999999999999999999999999999999999 454456678999999988887776655544 666653110 001
Q ss_pred HHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHh-c
Q 010375 237 KVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS-M 315 (512)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 315 (512)
.++..+..+.... + .+..+.++..+...++.++++. ++...+..+...........+.|.++++ +
T Consensus 181 ~~~~~~~~~~~~~---------~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (399)
T TIGR00893 181 EEEKYIVVGGLLA---------E-QQGKGPSTPKKYQIKELLKDRR----VWGLALGQFLVNIGLGFFLTWFPTYLVQER 246 (399)
T ss_pred HHHHhhcchhhcc---------c-cccccccCCCccchHHHhcCHH----HHHHHHHHHHHHhHHHHHHHHHHHHHHHHh
Confidence 1110000000000 0 0000111112233444444433 3333444444445556677778877765 8
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHH-hhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHH
Q 010375 316 GFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLIS-GGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVIC 394 (512)
Q Consensus 316 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (512)
|.++.+.+.......++.+++.++.+++.||++||+.... ......++........... . ..+..+..+....
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~ 320 (399)
T TIGR00893 247 GLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFAT-N-----YVNIPYAALALVA 320 (399)
T ss_pred cccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHh-c-----cchhHHHHHHHHH
Confidence 8888899999999999999999999999999998862111 1111111111111111000 0 0011222222222
Q ss_pred HHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-hhhHHHHHHHHHHHHHHH
Q 010375 395 LFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK-FGIFLFFAGWVTIMTIFV 469 (512)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~ 469 (512)
.... +.+..+..+.+..|..|++.|+++.|+.+....+|..++|.+.|.+.+..+ +...+.+.++..+.+.+.
T Consensus 321 -~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 394 (399)
T TIGR00893 321 -LGFF-GLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALS 394 (399)
T ss_pred -HHHh-chhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHH
Confidence 2222 222455667888999999999999999999999999999999999999888 666665555555444443
|
|
| >PRK05122 major facilitator superfamily transporter; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=267.03 Aligned_cols=340 Identities=17% Similarity=0.178 Sum_probs=242.7
Q ss_pred cccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhh--------chHHHHHHHHHHHhhh
Q 010375 78 CKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAA--------ANLAMLLTGRILLGVG 149 (512)
Q Consensus 78 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--------~~~~~l~~~r~l~G~~ 149 (512)
+|.|+.+.|++.+++.+++.+++++.|+++||+|||+++..+.++.+++.+.+.++ .+++.+++.|+++|++
T Consensus 46 ~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 125 (399)
T PRK05122 46 LGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIG 125 (399)
T ss_pred cCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhh
Confidence 48899999999999999999999999999999999999999999988877766553 2567899999999999
Q ss_pred hhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhccCCChh
Q 010375 150 IGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPN 229 (512)
Q Consensus 150 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~ 229 (512)
.+...+...+++.|++|+++|++++++...+..+|.++++.+ +....+..+||+.+++.++.+++..+.....|++++
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l--~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (399)
T PRK05122 126 ESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPL--GVLLYHWGGLAGLGLLIMLLALLGLLLARPRPAVPP 203 (399)
T ss_pred HHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHH--HHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 999999999999999999999999999999999999999999 555556779999988877666554443333343321
Q ss_pred HHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHH
Q 010375 230 SLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAP 309 (512)
Q Consensus 230 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (512)
. ++ ++.++++.+++.. .......+ ....+.....+.+
T Consensus 204 ~---~~----------------------------------~~~~~~~~~~~~~--~~~~~~~~----~~~~~~~~~~~~~ 240 (399)
T PRK05122 204 V---KG----------------------------------ERLPFRRVLGRVW--PYGMGLAL----ASIGFGTIATFIT 240 (399)
T ss_pred C---Cc----------------------------------cchhHHHHHHHHH--HHHHHHHH----HHHHHHHHHHHHH
Confidence 0 00 0001111111111 00111111 1112334455667
Q ss_pred HHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHH
Q 010375 310 VLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILV 389 (512)
Q Consensus 310 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (512)
.+.++.|+ .+.+.......++.+++.++.+++.||+++|+.+..+..+..++..++... ++.+..
T Consensus 241 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 305 (399)
T PRK05122 241 LYYAARGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLA-------------PSPWMA 305 (399)
T ss_pred HHHHHccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh-------------ccHHHH
Confidence 66666666 344566677788889999999999999999998887776666665544432 112333
Q ss_pred HHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHH
Q 010375 390 VVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFV 469 (512)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 469 (512)
+....+.+.+.+...... .....|..|++.|+++.|+.+....+|..+++.+.|.+.+..++...+...+++.+++++.
T Consensus 306 ~~~~~l~G~~~~~~~~~~-~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 384 (399)
T PRK05122 306 LIGAALTGFGFSLVFPAL-GVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLAL 384 (399)
T ss_pred HHHHHHHHHhHHHHHHHH-HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 344445555554333222 3455688899999999999999999999999999999999888877766666666666655
Q ss_pred hhccccCCC
Q 010375 470 YFFLPETKG 478 (512)
Q Consensus 470 ~~~~~~~~~ 478 (512)
....+++++
T Consensus 385 ~~~~~~~~~ 393 (399)
T PRK05122 385 TWLLYRRAP 393 (399)
T ss_pred HHHhccccc
Confidence 555555443
|
|
| >PRK03699 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=265.69 Aligned_cols=370 Identities=11% Similarity=0.048 Sum_probs=262.9
Q ss_pred HHHHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhh
Q 010375 31 CFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDY 110 (512)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~ 110 (512)
...+.++.++.+.+....+.. +|++.+++ |+|.++.+++.+.+.+++.++++++|++.||+
T Consensus 9 ~~~~~~~~~~~~~~~~~~g~~--~~~i~~~~-----------------~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~ 69 (394)
T PRK03699 9 TWISFLSYALTGALVIVTGMV--MGPIAEYF-----------------NLPVSSMSNTFTFLNAGILISIFLNAWLMEII 69 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhhh--hHHHHHHh-----------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334466777778877766665 67776666 88999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHH
Q 010375 111 GRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANM 190 (512)
Q Consensus 111 Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~ 190 (512)
|||+++..+.++.+++.++++++++++.+++.|+++|++.+...+....++.|++|+++|+++++.......+|..++|.
T Consensus 70 g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 149 (394)
T PRK03699 70 PLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPI 149 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999899999999999999999999998889999999888
Q ss_pred HHHhhcc-cCCCchhHHHHhhHHHHHHHHHHhhccCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcc
Q 010375 191 INYGTQK-LETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANS 269 (512)
Q Consensus 191 ~~~~~~~-~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (512)
+. ... .+..+||+.|.+.+++.++..++.++ .+.|+. ++++. ++
T Consensus 150 ~~--~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~-~~~p~~--~~~~~------------------------------~~ 194 (394)
T PRK03699 150 IA--AYLLARSIEWYWVYACIGLVYVAIFILTLF-SEFPAL--GKHAP------------------------------KA 194 (394)
T ss_pred HH--HHHHhccccHHHHHHHHHHHHHHHHHHHHh-cCCccc--cccCc------------------------------cc
Confidence 73 332 33469999999888877666554443 222210 00000 00
Q ss_pred cCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHh-cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 010375 270 IKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLG 348 (512)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~ 348 (512)
.+... +... ++.++...+..++....+..+..|.|.++++ +|+++.+++...+...++..+++++.++++||++
T Consensus 195 ~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~ 269 (394)
T PRK03699 195 DKPVA----KEKW-GIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFD 269 (394)
T ss_pred cCccc----cccC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 00000 0011 1112333333444444556677889988855 8999999999999999999999999999999999
Q ss_pred ChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHH
Q 010375 349 RRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSIT 428 (512)
Q Consensus 349 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~ 428 (512)
+|+.+.....+..+...++... ++.+......+..+.+.+..+ +....+..|..| +.++...+..
T Consensus 270 ~~~~l~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~G~~~~~~~-~~~~~~~~~~~~-~~~~~~~g~~ 334 (394)
T PRK03699 270 LQRILTVLAGLALVLMYLFVNT-------------DDPSHLLYAILGLGFFSSAIY-TTIITLGSQQTK-VASPKLVNFI 334 (394)
T ss_pred hhhHHHHHHHHHHHHHHHHHHc-------------CCchHHHHHHHHHHHHHHHHH-HHHHHHHHHHcc-CCCHHHHHHH
Confidence 9988876665544443333221 112222333334444333222 332344556555 3456778888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhhccc
Q 010375 429 VAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLP 474 (512)
Q Consensus 429 ~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 474 (512)
....++|..++|.+.|.+.+..++...+....++.+++.+.....+
T Consensus 335 ~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (394)
T PRK03699 335 LTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCILLG 380 (394)
T ss_pred HHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHHHH
Confidence 8999999999999999999988876655555554444444444433
|
|
| >TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=277.77 Aligned_cols=419 Identities=15% Similarity=0.086 Sum_probs=276.8
Q ss_pred CchHHHHHHHHHHHHhhhhhhhccccccccccHHHHHHhhhh-----hhhhhcccccCCccccCcchhHHHHHHHHHHHH
Q 010375 23 VTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHD-----VYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGL 97 (512)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~ 97 (512)
..++++.++.++.++....+.|...++.+ .+.+.++-.+. ..++.......+|++++..+.|++.+.+.+++.
T Consensus 13 ~~~~r~~i~~~~~~~~~~~y~dr~~~~~a--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~ 90 (465)
T TIGR00894 13 FCSFRLFLSFLLHICNVIIIAQRICLSLT--MVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQI 90 (465)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHhhheEE--EEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHH
Confidence 45566777777777777778888777766 33333311000 000000111233789999999999999999999
Q ss_pred HHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhh--chHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHH
Q 010375 98 VASFVASPVTRDYGRRASIICGGISFLLGAALNAAA--ANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNM 175 (512)
Q Consensus 98 i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~ 175 (512)
+++++.|+++||+|||+++..+.++++++.+++.++ .+++.+++.|+++|++.+...+....++.|++|+++|+++++
T Consensus 91 ~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 170 (465)
T TIGR00894 91 IIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLG 170 (465)
T ss_pred HHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHH
Confidence 999999999999999999999999999999887554 568889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCC-CchhHHHHhhHHHHHHHHHHhhc-cCCChhHHHHcCCHHHHHHHHHHHcCCchh
Q 010375 176 MFQLATTLGIFTANMINYGTQKLET-WGWRLSLGLAAAPALMMTVGGIL-LPETPNSLIERGKKVEGRRVLEKIRGTKEV 253 (512)
Q Consensus 176 ~~~~~~~lG~~~~~~~~~~~~~~~~-~~Wr~~f~~~~~~~~~~~~~~~~-~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~ 253 (512)
+...+..+|.++++++ .....+. .+||+.|++.++++++..+++++ .+|+|+... +.+.+|. +.+++
T Consensus 171 ~~~~~~~~g~~i~~~l--~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~-~~i~~------- 239 (465)
T TIGR00894 171 MSTSGFQLGTFIFLPI--SGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHP-CISKFEK-KYINS------- 239 (465)
T ss_pred HHHHHHHHHHHHHHHH--HHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCC-CCCHHHH-HHHHh-------
Confidence 9999999999999999 4445555 49999999999988777666655 566663211 0111111 00000
Q ss_pred hHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHh-cCCCCchhhHHHHHHHHH
Q 010375 254 NAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAV 332 (512)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~ 332 (512)
..+..+.+.+.+.+++++++++. ++...+..++....+..+..|+|.++++ +|++..+.++...+..++
T Consensus 240 ------~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~ 309 (465)
T TIGR00894 240 ------SLQGQKGSTRQSLPIKAIPKSLP----VWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLF 309 (465)
T ss_pred ------hcccccCCCCCCCCHHHHhcCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHH
Confidence 00000001112335666665544 4445555555666667778899988766 899999999999999999
Q ss_pred HHHHHHHHHHHHhhcCChhHHH---HhhHHHHHHH---HHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccc
Q 010375 333 LASSTLISIATVDKLGRRALLI---SGGIQMITCQ---VIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGP 406 (512)
Q Consensus 333 ~~~~~~~~g~l~d~~~~r~~~~---~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (512)
.+++.++.|+++||+++|+... .......++. .+..+.... ........+..+.+.+.+.+.. .+
T Consensus 310 ~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~~~~~~~-~~ 380 (465)
T TIGR00894 310 AWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPY--------LSAAFYLTIIILTLANAVSSGP-LA 380 (465)
T ss_pred HHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHH--------cCCchHHHHHHHHHHHHHhhhh-hh
Confidence 9999999999999975432110 0011111111 111111100 0011222233333333333222 22
Q ss_pred eeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc--c-hhhHHHHHHHHHHHHHHHhhccc
Q 010375 407 LGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSF--K-FGIFLFFAGWVTIMTIFVYFFLP 474 (512)
Q Consensus 407 ~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~--g-~~~~~~~~~~~~~~~~~~~~~~~ 474 (512)
.......|..| +.+|.+.|+.+..+.++++++|.+.|.+.+.. + +...+.+.++..+++.++.....
T Consensus 381 ~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~ 450 (465)
T TIGR00894 381 GVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLIFG 450 (465)
T ss_pred hhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeeeee
Confidence 22344456666 48999999999999999999999999887754 2 44455555555555554444443
|
|
| >PRK15402 multidrug efflux system translocase MdfA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=266.19 Aligned_cols=379 Identities=13% Similarity=0.131 Sum_probs=271.0
Q ss_pred CchHHHHHHHHHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHHh
Q 010375 23 VTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFV 102 (512)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~ 102 (512)
.+++.+...+++.+..+...++...+.+. +|.+.+++ |++..+.++..+.+.+++.+++++
T Consensus 7 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~-----------------~~s~~~~~~~~~~~~~~~~~~~~~ 67 (406)
T PRK15402 7 LGRQALLFPLCLVLFEFATYIANDMIQPG--MLAVVEDF-----------------NAGAEWVPTSMTAYLAGGMFLQWL 67 (406)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhhhhHhcc--hHHHHHHh-----------------CCCHHHHHHHHHHHHHHHHHHHHH
Confidence 34566666767777777777777777665 66677666 889999999999999999999999
Q ss_pred hhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHH
Q 010375 103 ASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATT 182 (512)
Q Consensus 103 ~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 182 (512)
.|+++||+|||+++..+.++.+++.+++.++++++.+++.|+++|++.+...+...+++.|++|+++|.+.+++......
T Consensus 68 ~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 147 (406)
T PRK15402 68 LGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVAL 147 (406)
T ss_pred HHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888899999999999999999999988888
Q ss_pred HHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhh-ccCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHH
Q 010375 183 LGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGI-LLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMV 261 (512)
Q Consensus 183 lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~-~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (512)
+|..++|.+ .....+..+||+.|++.++.+++..+..+ ..||+++... +.. +..+
T Consensus 148 ~~~~~g~~i--~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----------------~~~~-- 203 (406)
T PRK15402 148 LAPLLGPLV--GAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAGRVG---EKL-----------------SLKE-- 203 (406)
T ss_pred HHHHHHHHH--HHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCcccc---ccc-----------------cHHH--
Confidence 999999998 44445567999999998888777665544 4677652100 000 0000
Q ss_pred HHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHH-hcCCCCchhhHHHHHHHHHHHHHHHHH
Q 010375 262 DASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQ-SMGFKGDASLYSSAMTGAVLASSTLIS 340 (512)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~ 340 (512)
...+++..++++..+ ...+..+...........+.|.++. .+|+++.+.+.......++.+++.++.
T Consensus 204 --------~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~ 271 (406)
T PRK15402 204 --------LGRDYKLVLKNRRFV----AGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTL 271 (406)
T ss_pred --------HHHHHHHHHcCcHHH----HHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 011223444444322 2222222222222344455676654 489998888888787788899999999
Q ss_pred HHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhh
Q 010375 341 IATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLET 420 (512)
Q Consensus 341 g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 420 (512)
+++.||+++|+.+..+.++..++..++...... .....+.......+.+.+.+....+. .... ...++++
T Consensus 272 g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~g~g~~~~~~~~-~~~~-~~~~~~~ 341 (406)
T PRK15402 272 ARLTSRRPLRSLIRMGLWPMVAGLLLAALATVI--------SSHAYLWLTAGLSLYAFGIGLANAGL-YRLT-LFSSDVS 341 (406)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHc--------ccccHHHHHHHHHHHHHHHHHHhhhH-HHHH-hhhcccc
Confidence 999999999998888877666666655543210 01112233344444555554333322 2232 2334588
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHH
Q 010375 421 RSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMT 466 (512)
Q Consensus 421 ~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 466 (512)
++++.+..+....++..+++.+.+.+.+..+........+++.+..
T Consensus 342 ~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ 387 (406)
T PRK15402 342 KGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLW 387 (406)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988877555444444443333
|
|
| >KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-32 Score=271.64 Aligned_cols=391 Identities=17% Similarity=0.160 Sum_probs=281.1
Q ss_pred CccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccc
Q 010375 76 NYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQ 155 (512)
Q Consensus 76 ~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~ 155 (512)
+.++.+.....+..+++++|.++|++++|+++||+|||++++.++++..++.+++++++|++.+++.|++.|++.++...
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~ 190 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLT 190 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhH
Confidence 34577889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhccCCChhHHHHcC
Q 010375 156 AVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERG 235 (512)
Q Consensus 156 ~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~ 235 (512)
....+++|++++++|+.+..+ ......+..++++.+ ..... +||+.+++..+++++.++.+++.||+|||+..++
T Consensus 191 ~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~--a~~~~--~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~g 265 (521)
T KOG0255|consen 191 VGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGA--AYITR--DWRWLFWIISIPSGLFLLLWFLPPESPRWLLSKG 265 (521)
T ss_pred HhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHH--HHHHh--hHHHHHHHHHHHHHHHHHHHHccCcChHHHHHcC
Confidence 999999999999999999999 555555555555552 22222 8999999999999988888666789999999999
Q ss_pred CHHHHHHHHHHHcCCc---hhhHH-HHHH---HHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhH
Q 010375 236 KKVEGRRVLEKIRGTK---EVNAE-YQDM---VDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYA 308 (512)
Q Consensus 236 ~~~~~~~~~~~~~~~~---~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (512)
+.+++.+.+++..+.+ ....+ .+.. ++......+++..+.++++.+..++......+..+.....+++.
T Consensus 266 ~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl---- 341 (521)
T KOG0255|consen 266 RIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGL---- 341 (521)
T ss_pred chHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhh----
Confidence 9999999988875432 11111 1111 11111111223456777766543333333333332221112211
Q ss_pred HHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhH
Q 010375 309 PVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSIL 388 (512)
Q Consensus 309 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (512)
+......|. .........+.....+....+...|+.|||.....+..+..++++........ ...+.
T Consensus 342 ~~~~~~lg~---~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 408 (521)
T KOG0255|consen 342 SLNVSGLGG---NIYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDD----------LGGWL 408 (521)
T ss_pred hhhhhhcCc---hHHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhcc----------chhHH
Confidence 111222332 23445555556788888888899999999999999998888888888776421 11123
Q ss_pred HHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHH
Q 010375 389 VVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIF 468 (512)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 468 (512)
..+...+..++.+.++... +.+.+|++|+..|..+.+.......++++++|.+...............+.....+.+++
T Consensus 409 ~~~~~~~~~~~~~~~~~~~-~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 487 (521)
T KOG0255|consen 409 HWILPLLGKFFIGSAFNLI-FLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQMFPLLGLILFGWLALLLGLL 487 (521)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHHHH
Confidence 4444444445555555555 788899999999999999999999999999998876554422222222245566666666
Q ss_pred HhhccccCCCCCHHHHHHHHh
Q 010375 469 VYFFLPETKGVPIEEMILLWR 489 (512)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~ 489 (512)
...++||++++.+.+..++.+
T Consensus 488 ~~~~lpet~~~~l~~t~~~~~ 508 (521)
T KOG0255|consen 488 SLLLLPETKGKPLPGTLLDAE 508 (521)
T ss_pred HHhcCcccCCCCCchhHHHHH
Confidence 668999999988765544443
|
|
| >PRK15034 nitrate/nitrite transport protein NarU; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-32 Score=257.38 Aligned_cols=344 Identities=13% Similarity=0.055 Sum_probs=240.6
Q ss_pred ccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhh-----chHHHHHHHHHHHhhhhh
Q 010375 77 YCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAA-----ANLAMLLTGRILLGVGIG 151 (512)
Q Consensus 77 ~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~l~G~~~~ 151 (512)
++|+|.+|.+++.+++.+++.++.++.|++.||+|.|+++.++.+++++.+++++++ ++++.+++.|++.|++ +
T Consensus 64 ~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g 142 (462)
T PRK15034 64 GFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-G 142 (462)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-H
Confidence 469999999999999999999999999999999999999999999999999999987 8999999999999997 7
Q ss_pred hccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhc---c-------------cCCCchhHHHHhhHHHHH
Q 010375 152 FGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQ---K-------------LETWGWRLSLGLAAAPAL 215 (512)
Q Consensus 152 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~---~-------------~~~~~Wr~~f~~~~~~~~ 215 (512)
..++.....+++|+|+++||+++++.....++|..+++++..... . .+..+||..+++.+++.+
T Consensus 143 ~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~i 222 (462)
T PRK15034 143 ANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLA 222 (462)
T ss_pred HhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHH
Confidence 788999999999999999999999997666666655544321100 0 013458999888888887
Q ss_pred HHHHHhhc-cCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHH
Q 010375 216 MMTVGGIL-LPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPM 294 (512)
Q Consensus 216 ~~~~~~~~-~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (512)
+..++.++ +++.|. ++.......+.+|++. .+.+.+.+
T Consensus 223 v~~i~~~~~~~~~~~-------------------------------------~~~~~~~~~~vlk~~~----~Wllslly 261 (462)
T PRK15034 223 IATIAAWSGMNDIAS-------------------------------------SRASIADQLPVLQRLH----LWLLSLLY 261 (462)
T ss_pred HHHHHHHHhCCCccc-------------------------------------cccCHHHHHHHhCCCc----hhHHHHHH
Confidence 77666655 444331 0000112233444444 45555556
Q ss_pred HHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhc
Q 010375 295 FQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLK 374 (512)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 374 (512)
++.+..+..+..+.|++.++ .++.........+..+...+.++++|+++||+|+++.+.++.+...++...+.....
T Consensus 262 ~~tFG~fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp-- 338 (462)
T PRK15034 262 LATFGSFIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLP-- 338 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--
Confidence 66777778888899988766 233333333344556788889999999999999999998888766666544333221
Q ss_pred cCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCCh---------------------hhhhhHHHHHHHHHH
Q 010375 375 FGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPL---------------------ETRSAGQSITVAVNL 433 (512)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---------------------~~~~~~~g~~~~~~~ 433 (512)
. ....+.+.....+.....+.+.+..++ +-++.+.+|+ ++-|.+.|+....+.
T Consensus 339 --~---~~~~~~~~~~~~~~~l~~~~G~gngsv-fk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~ 412 (462)
T PRK15034 339 --G---TGSGNFIAFYAVFMGLFLTAGLGSGST-FQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGA 412 (462)
T ss_pred --c---ccccHHHHHHHHHHHHHHHhcccchHH-HHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHH
Confidence 0 001122333333333334445454444 4566677764 156788999999999
Q ss_pred HHHHHHHHHHHHHHhhcc-hhhHHHHHHHH-HHHHHHHhh
Q 010375 434 FFTFVIAQIFLTLLCSFK-FGIFLFFAGWV-TIMTIFVYF 471 (512)
Q Consensus 434 ~g~~~~~~~~~~~~~~~g-~~~~~~~~~~~-~~~~~~~~~ 471 (512)
+|+++.|.+++...+..| +...+....+. .++..+.++
T Consensus 413 ~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~ 452 (462)
T PRK15034 413 VGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWL 452 (462)
T ss_pred cccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988766 44333333333 333333333
|
|
| >PRK10504 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-32 Score=267.79 Aligned_cols=379 Identities=16% Similarity=0.161 Sum_probs=266.4
Q ss_pred HHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchh
Q 010375 34 AAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRR 113 (512)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr 113 (512)
++++.++..++...+++. +|.+.+++ |.+..+.+++.+.+.++..++.+++|+++||+|||
T Consensus 15 ~~~~~~~~~~~~~~~~~~--~p~~~~~~-----------------g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r 75 (471)
T PRK10504 15 VAFGFFMQSLDTTIVNTA--LPSMAQSL-----------------GESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVR 75 (471)
T ss_pred HHHHHHHHHHhHHHHHHH--HHHHHHHh-----------------CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchH
Confidence 345666777777776654 67776665 88999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 010375 114 ASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINY 193 (512)
Q Consensus 114 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~ 193 (512)
++++.+.++.+++.++++++++++.+++.|+++|++.+...+...+++.|++|+++|+++.++.....++|..++|.+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~-- 153 (471)
T PRK10504 76 NIFFTAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPAL-- 153 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHH--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCchhHHHHhhHHHHHHHHHHhhc-cCCChhHHHHcCCHHHHHHHHH---------HHcCCch--hhH-HHHH-
Q 010375 194 GTQKLETWGWRLSLGLAAAPALMMTVGGIL-LPETPNSLIERGKKVEGRRVLE---------KIRGTKE--VNA-EYQD- 259 (512)
Q Consensus 194 ~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~-~~e~p~~l~~~~~~~~~~~~~~---------~~~~~~~--~~~-~~~~- 259 (512)
.+...+..+||+.|++..+.+.+..+.... .|+.+. ++.+.+....... ...+.+. ... ....
T Consensus 154 ~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~---~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (471)
T PRK10504 154 GGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYTM---QTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGL 230 (471)
T ss_pred HHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCccc---cCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHH
Confidence 555556679999999988777666555444 454431 1111111110000 0000000 000 0000
Q ss_pred ----------HHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHh-cCCCCchhhHHHHH
Q 010375 260 ----------MVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAM 328 (512)
Q Consensus 260 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~ 328 (512)
...+++..+++..+. ++++++.... .....++..........+.|++++. .|.++.+.++....
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~----~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~ 305 (471)
T PRK10504 231 VAVGVVALLLYLLHARNNNRALFSL-KLFRTRTFSL----GLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIP 305 (471)
T ss_pred HHHHHHHHHHHHHHHhcCCCCccCH-HHhcccchHH----HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 000001111111122 3455554322 2232333333445666778888875 89999999999988
Q ss_pred HHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhccccee
Q 010375 329 TGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLG 408 (512)
Q Consensus 329 ~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (512)
..++.+++.++.+++.||+++|+.+..+..+..+...++.... .....+.......+.+.+.+....+.
T Consensus 306 ~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~g~~~~~~~~~~- 374 (471)
T PRK10504 306 MVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVA----------LLGWYYLLPFVLFLQGMVNSTRFSSM- 374 (471)
T ss_pred HHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhcc----------ccccHHHHHHHHHHHHHHHHHHHHHH-
Confidence 8888999999999999999999998888776666655444321 01112222223333334444333333
Q ss_pred eeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcch
Q 010375 409 WTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKF 452 (512)
Q Consensus 409 ~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~ 452 (512)
..+..+..|++.++.+.++.++...+|..+++.+.+.+.+..++
T Consensus 375 ~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 375 NTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 45667889999999999999999999999999999999887664
|
|
| >TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-32 Score=269.43 Aligned_cols=383 Identities=16% Similarity=0.151 Sum_probs=273.6
Q ss_pred HHHHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhh
Q 010375 31 CFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDY 110 (512)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~ 110 (512)
...++++.++..+|.+..+.. +|.+.+++ |.+..+.+++.+.+.++..++.++.|+++||+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~--~p~~~~~~-----------------g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 64 (485)
T TIGR00711 4 TIVLMLGTFMAVLDSTIVNVA--IPTIAGDL-----------------GSSLSQVQWVITSYMLANAISIPLTGWLAKRF 64 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHH--HHHHHHhc-----------------CCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh
Confidence 345567778888888887766 56666665 88999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHH
Q 010375 111 GRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANM 190 (512)
Q Consensus 111 Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~ 190 (512)
|||+++..+.++..++.+++++++|++.+++.|+++|++.+...+...+++.|++|+++|+++++++..+..+|..++|.
T Consensus 65 g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 144 (485)
T TIGR00711 65 GTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPT 144 (485)
T ss_pred CcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCCCchhHHHHhhHHHHHHHHHHhh-ccCCChhHHHHcCCHHHHHHH------------HHHHcCCchhhH-H
Q 010375 191 INYGTQKLETWGWRLSLGLAAAPALMMTVGGI-LLPETPNSLIERGKKVEGRRV------------LEKIRGTKEVNA-E 256 (512)
Q Consensus 191 ~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~-~~~e~p~~l~~~~~~~~~~~~------------~~~~~~~~~~~~-~ 256 (512)
+ +....++.+||+.|++.++++++..++.+ ++||+++. ++++.+..... ..+.......+. +
T Consensus 145 ~--~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (485)
T TIGR00711 145 L--GGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPA--ASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNE 220 (485)
T ss_pred c--HhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCcccc--ccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchH
Confidence 9 56666778999999998888776655544 36665431 11111111000 000000000000 0
Q ss_pred HHHH----------HHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHh-cCCCCchhhHH
Q 010375 257 YQDM----------VDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS-MGFKGDASLYS 325 (512)
Q Consensus 257 ~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~ 325 (512)
.... ....+..++.+....+.++++..... .+..+.....+....++.|.++++ +|+++.+++..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~ 296 (485)
T TIGR00711 221 ILILSITGLVAIIAFVVWELTDDNPLVDLRLFKYRNFTIG----CVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLH 296 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCccCHHHHcCCChHHH----HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 0000 00001111111112234555443222 222333333445566778888776 89999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhccc
Q 010375 326 SAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWG 405 (512)
Q Consensus 326 ~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (512)
.....++.+++.++.+++.||++||+.+..+..+..++...+..... +....+.......+.+.+.+....
T Consensus 297 ~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~g~g~~~~~~ 367 (485)
T TIGR00711 297 ILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFT---------PDTPFLAIALPQFIRGFGMGCFFM 367 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCC---------CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888877766666555442110 111122333344455555554444
Q ss_pred ceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 010375 406 PLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSF 450 (512)
Q Consensus 406 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~ 450 (512)
+.. ....+..|+++++++.|+.+..+.+|+.+++.+.+.+.++.
T Consensus 368 ~~~-~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~~ 411 (485)
T TIGR00711 368 PLT-TIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTNR 411 (485)
T ss_pred HHH-HHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 443 44457789999999999999999999999999999988754
|
This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. |
| >PRK10489 enterobactin exporter EntS; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-33 Score=269.62 Aligned_cols=356 Identities=14% Similarity=0.041 Sum_probs=256.1
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHh-----hchHHHHHHHHHHHhhhhhhc
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAA-----AANLAMLLTGRILLGVGIGFG 153 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~r~l~G~~~~~~ 153 (512)
+.++.+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+..+. .++++.+++.|++.|++.+..
T Consensus 48 ~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ 127 (417)
T PRK10489 48 TGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLG 127 (417)
T ss_pred HCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHH
Confidence 558899999999999999999999999999999999999888887777665542 567899999999999999888
Q ss_pred cchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhccCCChhHHHH
Q 010375 154 NQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIE 233 (512)
Q Consensus 154 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~ 233 (512)
.+...+++.|++|+++|+++.++.....++|..+|+.+ ++...+..+||+.|++.++..++..+..+.+||+++..
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-- 203 (417)
T PRK10489 128 VTALLAATPALVGRENLMQAGAITMLTVRLGSVISPAL--GGLLIAAGGVAWNYGLAAAGTFITLLPLLRLPALPPPP-- 203 (417)
T ss_pred HHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHH--HHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCCCCCCCC--
Confidence 88889999999999999999999999999999999999 44444556899999988887777766666777764210
Q ss_pred cCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHH
Q 010375 234 RGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQ 313 (512)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (512)
++.++ +.++ .+..++..++++..+..+... +... .......+.|.+.+
T Consensus 204 -~~~~~----------------~~~~----------~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~p~~~~ 251 (417)
T PRK10489 204 -QPREH----------------PLRS----------LLAGFRFLLASPVVGGIALLG----GLLT-MASAVRVLYPALAD 251 (417)
T ss_pred -ccccc----------------chHH----------HHHHHHHHHcChHHHHHHHHH----HHHH-HHHhHHHhhHHHHH
Confidence 00000 0000 011122333333322222111 1111 12345567788877
Q ss_pred h-cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHH
Q 010375 314 S-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVV 392 (512)
Q Consensus 314 ~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (512)
+ +|.++...++......++.+++.++.+++.||.++++.+..+.++..++.+++... +..+...+.
T Consensus 252 ~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~-------------~~~~~~~~~ 318 (417)
T PRK10489 252 EVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLM-------------PMWILAVLC 318 (417)
T ss_pred hccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHcc-------------chHHHHHHH
Confidence 7 89999999999999999999999999999999777777777666555554443321 112233334
Q ss_pred HHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHH-HHHHHHHHHHHHHhh
Q 010375 393 ICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFL-FFAGWVTIMTIFVYF 471 (512)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~ 471 (512)
.++.+.+.+. ..+...+++.|..|++.|+++.|+.+....+|..++|.+.|.+.+..++...+ ..+++..+++++...
T Consensus 319 ~~~~g~~~~~-~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 397 (417)
T PRK10489 319 LALFGYLSAI-SSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLL 397 (417)
T ss_pred HHHHHHHHHH-HHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH
Confidence 4444444332 22343567789999999999999999999999999999999999988865444 445555555666667
Q ss_pred ccccCCCCCHHHH
Q 010375 472 FLPETKGVPIEEM 484 (512)
Q Consensus 472 ~~~~~~~~~~~~~ 484 (512)
.+++.|+++.+|+
T Consensus 398 ~~~~~~~~~~~~~ 410 (417)
T PRK10489 398 VLGELRRFRQTPP 410 (417)
T ss_pred hcccccccccccc
Confidence 7777776555443
|
|
| >PRK03633 putative MFS family transporter protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-31 Score=253.65 Aligned_cols=355 Identities=13% Similarity=0.069 Sum_probs=250.5
Q ss_pred HHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhH
Q 010375 35 AIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRA 114 (512)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~ 114 (512)
.++.++.+.+.+..++. +|.+.+++ |.|..+.|++.+.+.++..+++++.|+++||+|||+
T Consensus 12 ~~~~~~~~~~~~~~~~~--lp~~~~~~-----------------~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~ 72 (381)
T PRK03633 12 LCGLLLLTLAIAVLNTL--VPLWLAQE-----------------HLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNR 72 (381)
T ss_pred HHHHHHHHHhhhhHHHH--HHHHHHHc-----------------CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 46666777888777766 66666665 889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHh
Q 010375 115 SIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYG 194 (512)
Q Consensus 115 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~ 194 (512)
++..+.++.+++.+++++++|++.++++|+++|++.+...+...+.+.+..++++|+++++++..+.++|..+|+.+ .
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~--~ 150 (381)
T PRK03633 73 SYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLL--V 150 (381)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH--H
Confidence 99999999999999999999999999999999999999888888888899999999999999999999999999999 4
Q ss_pred hcccCCCchhHHHHhhHHHHHHHH-HHhhccCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcc
Q 010375 195 TQKLETWGWRLSLGLAAAPALMMT-VGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHP 273 (512)
Q Consensus 195 ~~~~~~~~Wr~~f~~~~~~~~~~~-~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (512)
....+...|+.. +..+....... ++....+|++. +++++.+
T Consensus 151 ~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------~~~~~~~ 192 (381)
T PRK03633 151 SKVSTELMSVLP-WVTGLVLAAILPLLFTRILNQQA-------------------------------------ENHDSTS 192 (381)
T ss_pred hcccccccchHH-HHHHHHHHHHHHHHHhcccCCCC-------------------------------------CCCCCCC
Confidence 444333222222 22222221111 11112222110 0000122
Q ss_pred cHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHH
Q 010375 274 FRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALL 353 (512)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~ 353 (512)
.++.++++..+... ...+.....+.....+.|.+.++.|.++...+.......++.+++++..+++.||+++|+.+
T Consensus 193 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l 268 (381)
T PRK03633 193 IWPMLKLRQARLGV----NGCIISGIVLGSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVL 268 (381)
T ss_pred HHHHHHhcchHHHH----HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHH
Confidence 33444444322111 11111112233445668888888899988889888899999999999999999999999988
Q ss_pred HHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHH
Q 010375 354 ISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNL 433 (512)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~ 433 (512)
..+.....++...+... ........+.+.+.. ...|.....+.|..|+++++...+..+...+
T Consensus 269 ~~~~~~~~~~~~~~~~~----------------~~~~~~~~l~g~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (381)
T PRK03633 269 RVQVFVVILGSIAMLSQ----------------AAMAPALFILGAAGF-TLYPVAMAWACEKVEHHELVAMNQALLLSYT 331 (381)
T ss_pred HHHHHHHHHHHHHHhhh----------------HHHHHHHHHHHHHHH-hHHHHHHHHHHccCCHHHHHHHHHHHHHHHH
Confidence 77766665554433210 011112222232222 2334445666788888888888888888889
Q ss_pred HHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHH
Q 010375 434 FFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFV 469 (512)
Q Consensus 434 ~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 469 (512)
+|..++|.+.|.+.|+.++...+...+.+.+...+.
T Consensus 332 lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~ 367 (381)
T PRK03633 332 VGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLM 367 (381)
T ss_pred HHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHH
Confidence 999999999999999988766665555555444433
|
|
| >PRK12382 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-31 Score=256.80 Aligned_cols=333 Identities=13% Similarity=0.109 Sum_probs=235.4
Q ss_pred cccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHH---h-----hchHHHHHHHHHHHhhh
Q 010375 78 CKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNA---A-----AANLAMLLTGRILLGVG 149 (512)
Q Consensus 78 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~-----~~~~~~l~~~r~l~G~~ 149 (512)
+|+|..+.|++.+.+.+++.++++++|+++||+|||+++..+.+...++.+... + .++++.+++.|+++|++
T Consensus 46 lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 125 (392)
T PRK12382 46 LGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFG 125 (392)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHH
Confidence 488999999999999999999999999999999999999999888777654332 2 35789999999999999
Q ss_pred hhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhccCCChh
Q 010375 150 IGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPN 229 (512)
Q Consensus 150 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~ 229 (512)
.+...+...+++.|++|+++|++++++.+.+..+|..++|++ +....+..+||+.+.+..+..++........||.++
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~--~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (392)
T PRK12382 126 ESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPL--GLLLHSHFGFAALALTTMVLPLLAWAFNGTVRKVPA 203 (392)
T ss_pred HHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHH--HHHHHhccChHHHHHHHHHHHHHHHHHHHhccCCCC
Confidence 999888888999999999999999999999999999999999 455556678998877665554443333223343321
Q ss_pred HHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHH
Q 010375 230 SLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAP 309 (512)
Q Consensus 230 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (512)
. + +.+.+.++..+...... ....+ ..........+.|
T Consensus 204 ~----~---------------------------------~~~~~~~~~~~~~~~~~--~~~~l----~~~~~~~~~~~~~ 240 (392)
T PRK12382 204 H----A---------------------------------GERPSLWSVVGLIWKPG--LGLAL----QGVGFAVIGTFVS 240 (392)
T ss_pred C----c---------------------------------ccCchHHHHHHHHHHhH--HHHHH----HHHHHhHHHHHHH
Confidence 0 0 00001111111111111 11111 1122334556667
Q ss_pred HHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHH
Q 010375 310 VLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILV 389 (512)
Q Consensus 310 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (512)
.++++.+++. .+......+++.++++++.+++.||+++|+.+..+..+..++..++... ++.+..
T Consensus 241 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 305 (392)
T PRK12382 241 LYFASKGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLA-------------PTAWVA 305 (392)
T ss_pred HHHHhcCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHc-------------ccHHHH
Confidence 7777766643 4556666777888999999999999999998888777666665544331 112233
Q ss_pred HHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHH
Q 010375 390 VVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFV 469 (512)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 469 (512)
.....+.+.+.+... +.......|.+|+++|+++.|+.+....+|..++|.+.+.+.++.++...+.+.+++.+.+.+.
T Consensus 306 ~~~~~l~g~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 384 (392)
T PRK12382 306 LAGAALTGAGCSLIF-PALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIV 384 (392)
T ss_pred HHHHHHHHHHHHhHH-HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 334444444444333 3333556788999999999999999999999999999999999999877777666666555554
Q ss_pred hh
Q 010375 470 YF 471 (512)
Q Consensus 470 ~~ 471 (512)
.+
T Consensus 385 ~~ 386 (392)
T PRK12382 385 TI 386 (392)
T ss_pred HH
Confidence 44
|
|
| >COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-31 Score=240.69 Aligned_cols=383 Identities=15% Similarity=0.136 Sum_probs=288.4
Q ss_pred cCCCchHHHHHHHHHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHH
Q 010375 20 QGKVTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVA 99 (512)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~ 99 (512)
.++..+|...+.+......|..++..+.+.+. + ++|+|+|+.|.+++.+...+...+.
T Consensus 8 ~k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~-----i-----------------~~~~~LS~~q~~ll~aiPil~Gall 65 (417)
T COG2223 8 GKRIARRNLWLSTLAFDVGFMVWTLFSPLGVF-----I-----------------KSDFGLSEGQKGLLVAIPILVGALL 65 (417)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHhh-----h-----------------ccccCCCHHHHHHHHHHHHHHhHHH
Confidence 34455666666666666666666666554333 1 4566999999999999999999999
Q ss_pred HHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchH---HHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHH
Q 010375 100 SFVASPVTRDYGRRASIICGGISFLLGAALNAAAANL---AMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMM 176 (512)
Q Consensus 100 ~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~---~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~ 176 (512)
.++.|.+.||+|.|++..++.++..+-++..+++.++ +.+++.+++.|++ |+.+.+...++++|+|++++|.++|+
T Consensus 66 Rl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI 144 (417)
T COG2223 66 RLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGI 144 (417)
T ss_pred HHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcc-cceehcccccccccCChhhhhHHHHH
Confidence 9999999999999999999999999999999998544 5999999999996 55778999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCc---hhHHHHhhHHHHHHHHHHhhc-cCCChhHHHHcCCHHHHHHHHHHHcCCch
Q 010375 177 FQLATTLGIFTANMINYGTQKLETWG---WRLSLGLAAAPALMMTVGGIL-LPETPNSLIERGKKVEGRRVLEKIRGTKE 252 (512)
Q Consensus 177 ~~~~~~lG~~~~~~~~~~~~~~~~~~---Wr~~f~~~~~~~~~~~~~~~~-~~e~p~~l~~~~~~~~~~~~~~~~~~~~~ 252 (512)
.. ..++|..+..++ ........+ ||....+..+..++..+..++ +.|.|....
T Consensus 145 ~g-~GN~G~av~q~~--~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~-------------------- 201 (417)
T COG2223 145 AG-AGNLGVAVAQLV--APLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRA-------------------- 201 (417)
T ss_pred hc-cccccHHHHHHH--HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhc--------------------
Confidence 99 788888777766 333344446 999999988888886666555 676662100
Q ss_pred hhHHHHHHHHHHHhhcccC-cccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHh-cCCCCchhhHHHHHHH
Q 010375 253 VNAEYQDMVDASELANSIK-HPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTG 330 (512)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~ 330 (512)
..++.. ..++.+++++. .|.+.+.++..+.++..+..++|.++++ ++.++.+++.......
T Consensus 202 -------------~~~~~~~~~~~~v~~~~~----~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~ 264 (417)
T COG2223 202 -------------SVKPQLPAQLKAVFSNKD----TWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFP 264 (417)
T ss_pred -------------cccccchhHHHHHhcCcc----hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHH
Confidence 000011 23344554444 5566677777778889999999999876 9999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeee
Q 010375 331 AVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWT 410 (512)
Q Consensus 331 ~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (512)
+.+.+.++++|+++||+|.+|.+......+.++..++....... .........+........+.+.+...+ +.
T Consensus 265 ~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~------~~~~~~~~~~~~~l~l~~~~G~GnGsv-fk 337 (417)
T COG2223 265 LIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGF------GHGGSFVVFVAVFLALFVFAGLGNGSV-FK 337 (417)
T ss_pred HHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHcccccc------ccCcchHHHHHHHHHHHHHhccCcchh-ee
Confidence 99999999999999999999999888888877777766542110 001223344444555555566565555 67
Q ss_pred eecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-hhhHHHHHHHHHHHHHHHhhcc
Q 010375 411 VPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK-FGIFLFFAGWVTIMTIFVYFFL 473 (512)
Q Consensus 411 ~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~ 473 (512)
++...+|. +.|.+.|+....+.+|++.-|...+...+..| +...+.+.....+++.+..+..
T Consensus 338 ~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~ 400 (417)
T COG2223 338 MIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWAL 400 (417)
T ss_pred echHHHHh-hhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 77788875 67889999999999999999999999999988 5555555555555555444433
|
|
| >TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-31 Score=254.28 Aligned_cols=344 Identities=14% Similarity=0.150 Sum_probs=246.2
Q ss_pred hhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHH
Q 010375 40 IFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICG 119 (512)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~ 119 (512)
........+.+. +|.+.+++ |.++.+.+++.+.+.++..++++++|+++||+|||+++..+
T Consensus 16 ~~~~~~~~~~~~--~p~~~~~~-----------------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~ 76 (385)
T TIGR00710 16 LGPLGIDMYLPA--FPEIAADL-----------------STPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLG 76 (385)
T ss_pred HHHHHHHHhccc--HHHHHHHh-----------------CCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHH
Confidence 334455555544 56666655 88999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 010375 120 GISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLE 199 (512)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~ 199 (512)
.++.+++.++++++++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|..+++.+ .....+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~--~~~l~~ 154 (385)
T TIGR00710 77 LFIFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLL--GGYILV 154 (385)
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998 445556
Q ss_pred CCchhHHHHhhHHHHHHHHHHhh-ccCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHh
Q 010375 200 TWGWRLSLGLAAAPALMMTVGGI-LLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNIL 278 (512)
Q Consensus 200 ~~~Wr~~f~~~~~~~~~~~~~~~-~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (512)
..+||+.|++.++..++..+..+ +.||+++.. ++ ++ . + +....+++.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~----------------~-~----------~~~~~~~~~~ 203 (385)
T TIGR00710 155 WLSWHAIFAFLSLAGILLSALIFFILPETLPYE---AR-IQ----------------I-S----------TYFETFLLLL 203 (385)
T ss_pred HcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCc---cc-CC----------------H-H----------HHHHHHHHHH
Confidence 67999999998887776655544 467764210 00 00 0 0 0011223344
Q ss_pred cccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHH-hcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhh
Q 010375 279 ERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQ-SMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGG 357 (512)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~ 357 (512)
+++..+. ..+........+.....+.|.+.+ ++|.++.+.+.......++.+++.++.+++.||+++|+.+..+.
T Consensus 204 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~ 279 (385)
T TIGR00710 204 KSKMFWG----YALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGL 279 (385)
T ss_pred cCchhHH----HHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 4443222 222222222233455556677665 58999999999999999999999999999999999999888877
Q ss_pred HHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHH
Q 010375 358 IQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTF 437 (512)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~ 437 (512)
.+..++..++...... .............+.+.+.+... +.......|..| +.++++.++.+...+.++.
T Consensus 280 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~ 349 (385)
T TIGR00710 280 ILFAVSAVLLEITAIL--------GLGSWAMIIGPMMFVGIGNSMIS-SIAMAYALEDFP-HVAGTASALFGTLRLVLGA 349 (385)
T ss_pred HHHHHHHHHHHHHHHh--------ccchHHHHHHHHHHHHHHHHHHH-HHHHHHHhccCc-ccchHHHHHHHHHHHHHHH
Confidence 6666665555443210 00111222233333444444333 333455567776 6789999999998887776
Q ss_pred HHHHHHHHHHhh
Q 010375 438 VIAQIFLTLLCS 449 (512)
Q Consensus 438 ~~~~~~~~~~~~ 449 (512)
+.+.+.+.+.+.
T Consensus 350 i~~~~~~~~~~~ 361 (385)
T TIGR00710 350 IVGYLVSLIHGN 361 (385)
T ss_pred HHHHHHHhcccc
Confidence 777777744433
|
This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033. |
| >TIGR00883 2A0106 metabolite-proton symporter | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-31 Score=256.23 Aligned_cols=364 Identities=20% Similarity=0.249 Sum_probs=250.5
Q ss_pred hhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHH-----HHHHHHHHHHhhhhhhhhhchh
Q 010375 39 SIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSS-----LYLAGLVASFVASPVTRDYGRR 113 (512)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~-----~~l~~~i~~~~~g~l~dr~Grr 113 (512)
+.+++|...+++. .+.+.+++++ +.++.+.+.+.+. ..++..+++++.|+++||+|||
T Consensus 3 ~~~~~~~~~~~~~--~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r 65 (394)
T TIGR00883 3 AVEWFDFYLYGFA--AVLVFHTFFP---------------PSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRK 65 (394)
T ss_pred chhHHHHHHHHHH--HHHHHHHhcC---------------CCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhH
Confidence 4566777666654 4445555432 2345656655443 3344457899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhchHH--------HHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHH
Q 010375 114 ASIICGGISFLLGAALNAAAANLA--------MLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGI 185 (512)
Q Consensus 114 ~~l~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~ 185 (512)
+++..+.++..++.++++++++++ .+++.|+++|++.+...+....++.|++|+++|++..++...+..+|.
T Consensus 66 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~ 145 (394)
T TIGR00883 66 KTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGL 145 (394)
T ss_pred HHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHH
Confidence 999999999999999999999875 488899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcc------cCCCchhHHHHhhHHHHHHHHHHhhccCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHH
Q 010375 186 FTANMINYGTQK------LETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQD 259 (512)
Q Consensus 186 ~~~~~~~~~~~~------~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (512)
++++.+...... .+..+||+.|++.++..++..+.....||+|++..++
T Consensus 146 ~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------- 200 (394)
T TIGR00883 146 LLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQ------------------------- 200 (394)
T ss_pred HHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHH-------------------------
Confidence 999987432211 1356899999988877776666556677776321110
Q ss_pred HHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHH-hcCCCCchhhHHHHHHHHHHHHHHH
Q 010375 260 MVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQ-SMGFKGDASLYSSAMTGAVLASSTL 338 (512)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~ 338 (512)
+++++.+.+.++.++++.+ + ++......+.....+.....+.|.+.+ ++|.+..+.+.......+..+++.+
T Consensus 201 -----~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 273 (394)
T TIGR00883 201 -----EKHKKKRGPIRETLTKHRK-P-FLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIP 273 (394)
T ss_pred -----hccccccCCHHHHHHhchH-H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHH
Confidence 0011112334444443321 1 222333333334445566677888874 5889999999999999999999999
Q ss_pred HHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCCh
Q 010375 339 ISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPL 418 (512)
Q Consensus 339 ~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 418 (512)
+.++++||++||+.+.....+..+....+..... .....+.......+.+.+.+.... ....+..|.+|+
T Consensus 274 ~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~p~ 343 (394)
T TIGR00883 274 LSGALSDRIGRRPVLIIFTVLAALLAVPLLMALL---------DSGSFTLFFFLVLGLALIGGMYTG-PMGSFLPELFPT 343 (394)
T ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHh---------cCCchHHHHHHHHHHHHHHHHHhh-hHHHHHHHhCCc
Confidence 9999999999998776554443332221111110 011223333344444444443333 346788899999
Q ss_pred hhhhhHHHHHH-HHHHHHHHHHHHHHHHHHhhcc-hhhHHHHHHH
Q 010375 419 ETRSAGQSITV-AVNLFFTFVIAQIFLTLLCSFK-FGIFLFFAGW 461 (512)
Q Consensus 419 ~~~~~~~g~~~-~~~~~g~~~~~~~~~~~~~~~g-~~~~~~~~~~ 461 (512)
+.|+++.++.. ....+|..++|.+.|.+.++.+ +...+....+
T Consensus 344 ~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~ 388 (394)
T TIGR00883 344 EVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAA 388 (394)
T ss_pred cceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHH
Confidence 99999999854 4456788899999999999887 5444444443
|
This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc. |
| >TIGR00900 2A0121 H+ Antiporter protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-31 Score=256.86 Aligned_cols=327 Identities=14% Similarity=0.038 Sum_probs=244.1
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhc-----hHHHHHHHHHHHhhhhhhc
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAA-----NLAMLLTGRILLGVGIGFG 153 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~r~l~G~~~~~~ 153 (512)
+.+..+.+++.+.+.++..++++++|+++||+|||+++..+.++..++.++.++.+ +++.+++.|+++|++.+..
T Consensus 30 ~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 109 (365)
T TIGR00900 30 TGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFF 109 (365)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHH
Confidence 66899999999999999999999999999999999999999999999998888887 9999999999999999999
Q ss_pred cchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhcc--CCChhHH
Q 010375 154 NQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILL--PETPNSL 231 (512)
Q Consensus 154 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~--~e~p~~l 231 (512)
.+...+++.|++|+++|++++++...+..+|.++++.+ .....+..+||+.|++.++..++..+..+.+ ||+++.
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l--~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 186 (365)
T TIGR00900 110 TPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGI--GGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAAS- 186 (365)
T ss_pred HHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHH--HHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCCCc-
Confidence 99999999999999999999999999999999999999 4555566799999998887776665544443 333210
Q ss_pred HHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHH-hhHHH
Q 010375 232 IERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSIL-FYAPV 310 (512)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 310 (512)
+.++. +++ .. ++.+..++..++++..+.... ..+.......... .+.|.
T Consensus 187 ----~~~~~-------------~~~--~~-------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 236 (365)
T TIGR00900 187 ----EIQAL-------------SNA--VL-------RDTREGIKFVLKNPLLRTLLL----LALLFNLVFAPAIVALFPY 236 (365)
T ss_pred ----ccccc-------------chh--HH-------HHHHhHHHHHHcCcHHHHHHH----HHHHHHHHHHHHHHHHhHH
Confidence 00000 000 00 000122344444444322222 2222222223333 67788
Q ss_pred HHHh-cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHH
Q 010375 311 LFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILV 389 (512)
Q Consensus 311 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (512)
+.++ +|.+..+.+.......++.+++.++.+++.||.+||+.+..+..+..++...+.... ++.+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~ 304 (365)
T TIGR00900 237 VQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTP------------PNFPLF 304 (365)
T ss_pred HHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhc------------hhHHHH
Confidence 8776 899999999999999999999999999999999999888777655555554443321 113334
Q ss_pred HHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 010375 390 VVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK 451 (512)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g 451 (512)
.+..++.+.+.+.. .+....+..|..|++.|+++.|+.+....++..++|.+.|.+.|..|
T Consensus 305 ~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 305 LVLWFAIGVGYGPI-NVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 44455555555533 34445777899999999999999999999999999999999988653
|
|
| >KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-32 Score=257.60 Aligned_cols=362 Identities=17% Similarity=0.245 Sum_probs=270.8
Q ss_pred CCccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhc--hHHHHHHHHHHHhhhhhh
Q 010375 75 NNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAA--NLAMLLTGRILLGVGIGF 152 (512)
Q Consensus 75 ~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~ 152 (512)
+.+++++..+.+++.++++.|+.+++++.|+++||||.|+++..+.++.++++++..++. +++.+++.|+++|++.|.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 568999999999999999999999999999999999999999999999999999999875 456789999999999999
Q ss_pred ccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCC-CchhHHHHhhHHHHHHHHHHhhc-cCCChhH
Q 010375 153 GNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLET-WGWRLSLGLAAAPALMMTVGGIL-LPETPNS 230 (512)
Q Consensus 153 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~-~~Wr~~f~~~~~~~~~~~~~~~~-~~e~p~~ 230 (512)
.+|+...+.++|.|++||++..++...+..+|.+++-++ .+.+.+. .||+++|++.++.+++..+++++ ..|+|..
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~--sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~ 222 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPV--SGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSK 222 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHh--HHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 999999999999999999999999999999999999988 5555555 89999999999999998887765 6777742
Q ss_pred HHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHH---HhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhh
Q 010375 231 LIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDAS---ELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFY 307 (512)
Q Consensus 231 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (512)
+..-..+| .+..++.. ..+++.+.|++++++++. ++.+.+..++...++..+..|
T Consensus 223 -h~~is~~E-----------------l~~I~~~k~~~~~~~~~~vP~~~i~ts~~----vwai~~~~f~~~~~~~~l~~y 280 (466)
T KOG2532|consen 223 -HPNISEKE-----------------LKYIEKGKSEAHVKKKPPVPYKAILTSPP----VWAIWISAFGGNWGFYLLLTY 280 (466)
T ss_pred -CCCCCHHH-----------------HHHHHhcccccccCCCCCCCHHHHHcCHH----HHHHHHHHHHHHHHHHHHHHH
Confidence 11111111 11111111 111114678999998877 777888888888889999999
Q ss_pred HHHHHHh-cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCCh--------hHH-HHhhHHHHHHHHHHHHHHhhccCC
Q 010375 308 APVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRR--------ALL-ISGGIQMITCQVIVSIILGLKFGP 377 (512)
Q Consensus 308 ~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r--------~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 377 (512)
.|.|+++ +|++..+.|+..++..+...+..+++|.++||+.+| |.+ .++....+++++.+.+.
T Consensus 281 ~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~------- 353 (466)
T KOG2532|consen 281 LPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFT------- 353 (466)
T ss_pred hhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeec-------
Confidence 9999998 999999999999999999999999999999998652 111 22222333333333222
Q ss_pred CcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh---cchhh
Q 010375 378 NQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCS---FKFGI 454 (512)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~---~g~~~ 454 (512)
+....+..+.++.+.....+...... +.-..+. .+++.+..+|+.+....+.++++|.+.+.+... ..|..
T Consensus 354 ----~~~~~~~a~~~l~~~~~~~g~~~~Gf-~~~~~~~-apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~ 427 (466)
T KOG2532|consen 354 ----SDEHRLLAVILLTIAIGLSGFNISGF-YKNHQDI-APQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRI 427 (466)
T ss_pred ----CCCcchHHHHHHHHHHHHcccchhhh-Hhhhhhc-cchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHH
Confidence 11122233333333333333222221 1222222 558899999999999999999999999998842 24666
Q ss_pred HHHHHHHHHHHHHHHhhcc
Q 010375 455 FLFFAGWVTIMTIFVYFFL 473 (512)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~ 473 (512)
.+.+.++..+++.+.+.+.
T Consensus 428 VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 428 VFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred HHHHHHHHHHHhchheeEe
Confidence 6666666655555555444
|
|
| >TIGR00712 glpT glycerol-3-phosphate transporter | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-31 Score=261.39 Aligned_cols=372 Identities=14% Similarity=0.066 Sum_probs=240.7
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhh----chHHHHHHHHHHHhhhhhhcc
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAA----ANLAMLLTGRILLGVGIGFGN 154 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~----~~~~~l~~~r~l~G~~~~~~~ 154 (512)
|+++.+.+++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+++++. ++++.+.+.|++.|++.+...
T Consensus 57 g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~ 136 (438)
T TIGR00712 57 GFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGW 136 (438)
T ss_pred CCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcch
Confidence 7799999999999999999999999999999999999999999999998887764 467788899999999999988
Q ss_pred chhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHH-hhccCCChhHHHH
Q 010375 155 QAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVG-GILLPETPNSLIE 233 (512)
Q Consensus 155 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~-~~~~~e~p~~l~~ 233 (512)
+.....+.|++|+++|+++++++..+..+|..+++.+.... .....+||+.|++.++++++..+. .+++||+|+....
T Consensus 137 ~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~-~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~ 215 (438)
T TIGR00712 137 PPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLG-MAWFNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGL 215 (438)
T ss_pred HHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHH-HHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCC
Confidence 88899999999999999999999999999999988773222 223358999999988887775544 4557887753210
Q ss_pred cCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCccc-HHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHH
Q 010375 234 RGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPF-RNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLF 312 (512)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (512)
++ .++.+ .+... +..+ +.+.+.+.+..+ +..++++. ++...+..++.....+....+.|.++
T Consensus 216 ~~-~~~~~-------~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~p~~l 278 (438)
T TIGR00712 216 PP-IEEYR-------NDYPD--DYNE---KAEQELTAKEIFMQYVLPNKL----LWYIAIANVFVYLLRYGVLDWSPTYL 278 (438)
T ss_pred CC-chhcc-------ccccc--cccc---ccccccchHHHHHHHHccCch----HHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 00 00000 00000 0000 000000000011 12333333 22333333333334456677888888
Q ss_pred Hh-cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHH
Q 010375 313 QS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVV 391 (512)
Q Consensus 313 ~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (512)
++ .|+++.++++...+..+..+++.++.+++.||+++++....+................. +....+....
T Consensus 279 ~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 350 (438)
T TIGR00712 279 KEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMN--------PAGNPLVDMI 350 (438)
T ss_pred HHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhc--------CCCchHHHHH
Confidence 76 79999999999999999999999999999999964432222322222211111111100 0011121222
Q ss_pred HHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHH-HHHHHHHHHHHhhcchhhHHHHHHH-HHHHHHHH
Q 010375 392 VICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFT-FVIAQIFLTLLCSFKFGIFLFFAGW-VTIMTIFV 469 (512)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~-~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~ 469 (512)
.....+.... +..........|.+|++.|+++.|+.+..+++++ +++|.+.|.+.|+.++...+..... .++..+..
T Consensus 351 ~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~ 429 (438)
T TIGR00712 351 CMIVIGFLIY-GPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILL 429 (438)
T ss_pred HHHHHHHHHc-cHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 2222222111 1111112345689999999999999999988875 6899999999998887665544443 34444444
Q ss_pred hhccccCC
Q 010375 470 YFFLPETK 477 (512)
Q Consensus 470 ~~~~~~~~ 477 (512)
....+|.|
T Consensus 430 ~~~~~~~~ 437 (438)
T TIGR00712 430 IVVMIGEK 437 (438)
T ss_pred HHHHhhcc
Confidence 44555543
|
This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar. |
| >PRK15403 multidrug efflux system protein MdtM; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-30 Score=251.77 Aligned_cols=366 Identities=14% Similarity=0.114 Sum_probs=249.0
Q ss_pred HHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhch
Q 010375 33 VAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGR 112 (512)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Gr 112 (512)
...+..+....+...+.+. +|.+.+++ +.+..+.++..+.+.++++++++++|+++||+||
T Consensus 20 ~~~~~~~~~~~~~~~~~p~--l~~i~~~~-----------------~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Gr 80 (413)
T PRK15403 20 ALILYDFAAYLTTDLIQPG--IINVVRDF-----------------NADVSLAPASVSLYLAGGMALQWLLGPLSDRIGR 80 (413)
T ss_pred HHHHHHHHHHHHHHhhccC--HHHHHHHh-----------------CCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCc
Confidence 3345555666677777666 67676666 8899999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHH
Q 010375 113 RASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMIN 192 (512)
Q Consensus 113 r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~ 192 (512)
|++++.+.++++++.+++++++|++.++++|+++|++.+...+....++.|++|+++|++++++...+..+|..++|.++
T Consensus 81 r~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg 160 (413)
T PRK15403 81 RPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSG 160 (413)
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998877777788899999999999999999999999999999994
Q ss_pred HhhcccCCCchhHHHHhhHHHHHHHHHHh-hccCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccC
Q 010375 193 YGTQKLETWGWRLSLGLAAAPALMMTVGG-ILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIK 271 (512)
Q Consensus 193 ~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~-~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (512)
....+..+||+.|++.++..++..+.. +++||+++. +++..+ . +...
T Consensus 161 --~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~---~~~~~~-----------------~----------~~~~ 208 (413)
T PRK15403 161 --AALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVKR---GAVPFS-----------------A----------KSVL 208 (413)
T ss_pred --HHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCccc---cCCCCC-----------------h----------HHHH
Confidence 444456799999999988887776554 447887521 000000 0 0001
Q ss_pred cccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHh-cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCCh
Q 010375 272 HPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRR 350 (512)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r 350 (512)
.+++.+++++. ++...+........+..+..+.|.++++ +|+++.+.++.......+.+++..+.+++.++..++
T Consensus 209 ~~~~~ll~~~~----~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~ 284 (413)
T PRK15403 209 RDFRNVFRNRL----FLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEP 284 (413)
T ss_pred HHHHHHHcCHH----HHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCch
Confidence 12344454443 2323333333333445566677877776 699999999988888888888888888876555444
Q ss_pred hHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHH
Q 010375 351 ALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVA 430 (512)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~ 430 (512)
+.......+..++..++....... + +..+..+...++.+.+.+...... .... ..-....+|++.++.+.
T Consensus 285 ~~~~~~~~~~~ig~~l~~~~~~~~-------~-~~~~~~~~~~~l~~~G~~~~~p~~-~~~a-l~~~~~~~G~a~a~~~~ 354 (413)
T PRK15403 285 RFIWRAVPIQLVGLALLIVGNLLW-------P-HVWLWSVLGTSLYAFGIGLIFPTL-FRFT-LFSNNLPKGTVSASLNM 354 (413)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHc-------c-ccHHHHHHHHHHHHHHHHHHhHHH-HHHH-hccCCCCCcHHHHHHHH
Confidence 443333223333333222211000 0 111223344444555554443322 2111 11122247899999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHH
Q 010375 431 VNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVT 463 (512)
Q Consensus 431 ~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 463 (512)
....+...++...+++.++.....+.....++.
T Consensus 355 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 387 (413)
T PRK15403 355 VILMVMAVSVEIGRWLWFNGGRLPFHLLAVVAG 387 (413)
T ss_pred HHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHH
Confidence 999999999999998877754444444444333
|
|
| >KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-33 Score=251.86 Aligned_cols=369 Identities=15% Similarity=0.180 Sum_probs=253.1
Q ss_pred CchHHHHHHHHHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHHh
Q 010375 23 VTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFV 102 (512)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~ 102 (512)
...+.+..+.+.++.+.+++.|...+..+ ++..+ +++|++++..|++.+.+.+.+.+.+|+
T Consensus 27 ~~~~~~~~l~il~~vnlmny~Dr~~iagv--~~~v~-----------------~~fni~~s~~Gll~~vf~v~~~i~sPl 87 (493)
T KOG1330|consen 27 SMKSPTLTLVILCLVNLMNYADRYTIAGV--LKEVQ-----------------TYFNISDSELGLLQTVFIVVFMIASPL 87 (493)
T ss_pred ccccchHHHHHHHHHHHHHHhhhhhhhhh--hHHHH-----------------HhcCCCchhccchhHHHHHHHHHHHHH
Confidence 34455666667788889999999886654 44444 444999999999999999999999999
Q ss_pred hhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHH
Q 010375 103 ASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATT 182 (512)
Q Consensus 103 ~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 182 (512)
+|+++|||+||+++.+|..+|.++.++++++..||+++++|.+.|+|.+...++++++++|.+|..+|++++++++.+..
T Consensus 88 ~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ip 167 (493)
T KOG1330|consen 88 FGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIP 167 (493)
T ss_pred HHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCc-hhHHHHhhHHHHHHHHHHhhc-cCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHH
Q 010375 183 LGIFTANMINYGTQKLETWG-WRLSLGLAAAPALMMTVGGIL-LPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDM 260 (512)
Q Consensus 183 lG~~~~~~~~~~~~~~~~~~-Wr~~f~~~~~~~~~~~~~~~~-~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (512)
+|..+|.+. +.......+ |||.|+..++++++..++.++ .+|++| +..++... +
T Consensus 168 vGsglG~vv--gs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~r-----ga~~~~~~-------~---------- 223 (493)
T KOG1330|consen 168 VGSGLGYVV--GSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPER-----GARDEVDG-------E---------- 223 (493)
T ss_pred cccceeEEe--eeeeccCccceEEEEEeehHHHHHHHHHHHhhccCccc-----cccccccc-------C----------
Confidence 999999888 444444433 999999999999988777655 566542 11111100 0
Q ss_pred HHHHHhhcccCcccHHHh---cccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHh----cCCCCchhhHHHHHHHHHH
Q 010375 261 VDASELANSIKHPFRNIL---ERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS----MGFKGDASLYSSAMTGAVL 333 (512)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~ 333 (512)
.+..++....++++. +.+. .....+...........+.+|.|.+... .|++..+..++..+...++
T Consensus 224 ---~~~~~~~ts~~kDl~~l~~~~v----~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G 296 (493)
T KOG1330|consen 224 ---NKMVKPFTSVWKDLKVLAKIKV----FVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGG 296 (493)
T ss_pred ---CcCCCCccchHHHHHHHHccCc----eeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhc
Confidence 000111122233322 2222 2223333333334446667777766543 5667777777888888999
Q ss_pred HHHHHHHHHHHhhcCCh----hHHHHhhHH----HHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhccc
Q 010375 334 ASSTLISIATVDKLGRR----ALLISGGIQ----MITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWG 405 (512)
Q Consensus 334 ~~~~~~~g~l~d~~~~r----~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (512)
.+|.+++|.++||+.++ ......-+. ...+...+...... .....+..++++.+........+.
T Consensus 297 ~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~--------~~~s~~~~~il~~~g~~~~~~~~a 368 (493)
T KOG1330|consen 297 SLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAF--------TSSSMIFGLILFLVGETISWFNWA 368 (493)
T ss_pred hhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhh--------hhHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999994321 111111111 11111111111100 112223333333333333333334
Q ss_pred ceeeeeecccCChhhhhhHHHHHHHHHHHHH-HHHHHHHHHHHhhc
Q 010375 406 PLGWTVPSEIFPLETRSAGQSITVAVNLFFT-FVIAQIFLTLLCSF 450 (512)
Q Consensus 406 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~-~~~~~~~~~~~~~~ 450 (512)
+. .-+..|+.|++.|.++.++-..+..+.+ +.+|++.|.+.|+.
T Consensus 369 ~n-~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l 413 (493)
T KOG1330|consen 369 TN-NPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKL 413 (493)
T ss_pred cc-cceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHh
Confidence 44 3445689999999999999998877655 45555999988864
|
|
| >TIGR00897 2A0118 polyol permease family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-30 Score=250.66 Aligned_cols=350 Identities=14% Similarity=0.097 Sum_probs=236.8
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHH---h-hchHHHHHHHHHHHhhhhhhcc
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNA---A-AANLAMLLTGRILLGVGIGFGN 154 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~-~~~~~~l~~~r~l~G~~~~~~~ 154 (512)
|++..+.|++.+.+.++..++++++|+++||+|||+++..+.++.+++++++. + .++++.+++.|+++|++.+...
T Consensus 44 g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~ 123 (402)
T TIGR00897 44 GLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFA 123 (402)
T ss_pred CCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHH
Confidence 88999999999999999999999999999999999999999999998877653 3 3578888999999999998888
Q ss_pred chhhhhhhhcCCCCCchhHHHHHHHHHHHHH-HHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHh-hccCCChhHHH
Q 010375 155 QAVPLYLSEMAPTHLRGGLNMMFQLATTLGI-FTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGG-ILLPETPNSLI 232 (512)
Q Consensus 155 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~-~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~-~~~~e~p~~l~ 232 (512)
+.....+.+++|+++|++++++...+.++|. ++++.+ .....+..||+..++......++..++. ++.+|.++..
T Consensus 124 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~--~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 200 (402)
T TIGR00897 124 YSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYY--SSYAIPAFGEMNTLWSALAFVLTGGVIALFSNKDIFTPQ- 200 (402)
T ss_pred hHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhcccccchHHHHHHHHHHHHHHHHHHHhccCCCCCcc-
Confidence 8888889999999999999999999999997 578887 4555556676665554433333333332 3344432100
Q ss_pred HcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHH
Q 010375 233 ERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLF 312 (512)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (512)
++++.+ +.+ +.+..++.+++++. ++...+..++..........+.|.+.
T Consensus 201 ~~~~~~-----------------~~~----------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~p~~~ 249 (402)
T TIGR00897 201 HMQTRE-----------------KFS----------ELGKAATILFTNPN----VLLGGMVRIINTIGLFGFAVFLPMFV 249 (402)
T ss_pred cccCCc-----------------chh----------hHHHHHHHHHcChh----HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000 000 00112234444443 22233333334445566778899998
Q ss_pred HhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHH-hhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHH
Q 010375 313 QSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLIS-GGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVV 391 (512)
Q Consensus 313 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (512)
+++|++..+.+.......++.+++.+..|+++||++||+.... +.+...++...+...... ..+..+....
T Consensus 250 ~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~--------~~~~~~~~~~ 321 (402)
T TIGR00897 250 AELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQH--------FGHSFAVALI 321 (402)
T ss_pred HHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHc--------cCCcHHHHHH
Confidence 8899999998888888999999999999999999998876642 222223322222221100 0011223333
Q ss_pred HHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhh
Q 010375 392 VICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYF 471 (512)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 471 (512)
...+.+.+.+. ..+. .....|..| ++|+++.|+.+....+++.++|.+.+.+.+..|+...+.+.+++.+++.+...
T Consensus 322 ~~~~~G~~~~~-~~~~-~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~ 398 (402)
T TIGR00897 322 IAIALGIFLAG-YVPL-AAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTA 398 (402)
T ss_pred HHHHHHHHHHH-HHHH-HHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHH
Confidence 34444444432 2333 234456544 68999999999999999999999999999998866665555555555444444
Q ss_pred cc
Q 010375 472 FL 473 (512)
Q Consensus 472 ~~ 473 (512)
++
T Consensus 399 ~~ 400 (402)
T TIGR00897 399 FI 400 (402)
T ss_pred Hh
Confidence 43
|
This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis. |
| >TIGR00881 2A0104 phosphoglycerate transporter family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-32 Score=262.03 Aligned_cols=371 Identities=13% Similarity=0.055 Sum_probs=249.7
Q ss_pred hhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHH
Q 010375 38 GSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASII 117 (512)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~ 117 (512)
.+...++...++.. .|.+.+++ |++..+.+++.+.+.++..+++++.|+++||+|||+++.
T Consensus 4 ~~~~~~~~~~~~~~--~~~~~~~~-----------------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~ 64 (379)
T TIGR00881 4 YAAYYLVRKNFALA--MPYLVEEI-----------------GLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLP 64 (379)
T ss_pred hhHHHHhHHhhhhh--hHHHHHHh-----------------CCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhH
Confidence 34455566665555 55565555 889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHH-HHHhhc
Q 010375 118 CGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANM-INYGTQ 196 (512)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~-~~~~~~ 196 (512)
.+.++.+++.++++++++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..+++. + ...
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~--~~~ 142 (379)
T TIGR00881 65 IGLILCAIVNLFFGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLV--LFG 142 (379)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHH--HHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999994 5 233
Q ss_pred ccCCCchhHHHHhhHHHHHHHHHHh-hccCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccH
Q 010375 197 KLETWGWRLSLGLAAAPALMMTVGG-ILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFR 275 (512)
Q Consensus 197 ~~~~~~Wr~~f~~~~~~~~~~~~~~-~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (512)
..+..+||+.|++.+++.++..+.. ++.||+|+....+...++. .++.+.+ .++..+..+..+...+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~---~~~~~~~~~~~~~~~~ 210 (379)
T TIGR00881 143 IAELYSWHWVFIVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEMP---------NEEPDGD---AEKKEEELTKKQIFLQ 210 (379)
T ss_pred HHhcCCchhHHHHHHHHHHHHHHHHheeeCCCccccccCccccCc---------ccccccc---cccccccccchHHHHH
Confidence 3455689999998887776654444 4467766421110000000 0000000 0000000001111223
Q ss_pred HHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHh-cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHH
Q 010375 276 NILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLI 354 (512)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~ 354 (512)
.+++++. ++...+..+...........+.|.++++ .|+++.+.+.......++.+++.++.+++.||..+|+...
T Consensus 211 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~ 286 (379)
T TIGR00881 211 YVLLNKV----LWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGP 286 (379)
T ss_pred HHHhcch----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchH
Confidence 3343333 3333333333333445666777877755 7999999999999999999999999999999864332222
Q ss_pred HhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHH
Q 010375 355 SGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLF 434 (512)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~ 434 (512)
............+...... +..............+.... +..+....+..|.+|++.|+++.|+.+....+
T Consensus 287 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~ 357 (379)
T TIGR00881 287 LAVFFMALIIVSLLVYWLN--------PAANPLMDLICLFALGFLVY-GPQMLIGVIASELAPKKAAGTAAGFVGFFAYL 357 (379)
T ss_pred HHHHHHHHHHHHHHHHhcC--------cchhHHHHHHHHHHHHHHHh-hhhHHHHHHHHHhcCcchhHHHHHHHHHhhhh
Confidence 2211111111111111100 01112222222223332222 22233345678999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcchhh
Q 010375 435 FTFVIAQIFLTLLCSFKFGI 454 (512)
Q Consensus 435 g~~~~~~~~~~~~~~~g~~~ 454 (512)
|+.++|.+.|.+.++.|+..
T Consensus 358 g~~~~~~~~g~l~~~~g~~~ 377 (379)
T TIGR00881 358 GGILAGLPLGYLADGFGWAG 377 (379)
T ss_pred hhhhhhhhHHHHHHhhcccc
Confidence 99999999999999887643
|
|
| >PRK09874 drug efflux system protein MdtG; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-30 Score=253.48 Aligned_cols=365 Identities=14% Similarity=0.108 Sum_probs=247.5
Q ss_pred HHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcch-----hHHHHHHHHHHHHHHHHhhhhhhhhh
Q 010375 36 IGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQG-----LAAFTSSLYLAGLVASFVASPVTRDY 110 (512)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-----~g~~~s~~~l~~~i~~~~~g~l~dr~ 110 (512)
++.++.++..+.+.+. +|.+.+++ |++..+ .|++.+.+.++..++++++|+++||+
T Consensus 21 ~~~~~~~~~~~~~~~~--l~~~~~~~-----------------g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~ 81 (408)
T PRK09874 21 LGCFLTGAAFSLVMPF--LPLYVEQL-----------------GVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRK 81 (408)
T ss_pred HHHHHHHHHHHHhhhh--HHHHHHHh-----------------CCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 3445555555555444 56666655 555443 58999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHH
Q 010375 111 GRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANM 190 (512)
Q Consensus 111 Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~ 190 (512)
|||+++..+.++.+++.++++++++++.+++.|++.|++.+ ..+....++.|++|+++|++++++...+..+|.+++|.
T Consensus 82 g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (408)
T PRK09874 82 GRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPL 160 (408)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999765 56777888999999999999999999999999999999
Q ss_pred HHHhhcccCCCchhHHHHhhHHHHHHHHHHhh-ccCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcc
Q 010375 191 INYGTQKLETWGWRLSLGLAAAPALMMTVGGI-LLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANS 269 (512)
Q Consensus 191 ~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~-~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (512)
+ .....+..+||+.|++.++..++..+..+ ++||+++.. ++++ ..+.
T Consensus 161 ~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-----------------~~~~--------- 208 (408)
T PRK09874 161 A--GGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQPV----SKKE-----------------MLHM--------- 208 (408)
T ss_pred H--HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcccc----cchh-----------------hhHH---------
Confidence 9 45555567899999998887776655544 366653110 0000 0000
Q ss_pred cCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHhcCCCCc----hhhHHHHHHHHHHHHHHHHHHHHHh
Q 010375 270 IKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGD----ASLYSSAMTGAVLASSTLISIATVD 345 (512)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----~~~~~~~~~~~~~~~~~~~~g~l~d 345 (512)
+ +..+.++++.. ........+...........+.+.+..+.+.+.. ..+......+++.+++.+..+++.|
T Consensus 209 -~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~d 283 (408)
T PRK09874 209 -R-EVVTSLKNPKL---VLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGD 283 (408)
T ss_pred -H-HHHHhCcCCch---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0 00111222221 1111111111111223334455555555332222 2345555667788888999999999
Q ss_pred hcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHH
Q 010375 346 KLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQ 425 (512)
Q Consensus 346 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 425 (512)
|++||+.+..+..+..++.+.+... +..+...+...+.+.+.+.. .+.......+..|++.+++.+
T Consensus 284 r~g~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~ 349 (408)
T PRK09874 284 RIGPEKILITALIFSVLLLIPMSFV-------------QTPLQLGILRFLLGAADGAL-LPAVQTLLVYNSSNQIAGRIF 349 (408)
T ss_pred ccccchhHHHHHHHHHHHHHHHHHh-------------ccHHHHHHHHHHHHhhhHhh-HHHHHHHHHHhCCcccceeee
Confidence 9999998887776655544433321 11233333334444444433 233345556778889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhh
Q 010375 426 SITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYF 471 (512)
Q Consensus 426 g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 471 (512)
++.+....+|..++|.+.|.+.+..++...+...+++.+.+.+..+
T Consensus 350 ~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~ 395 (408)
T PRK09874 350 SYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSW 395 (408)
T ss_pred hHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988887766666665555554443
|
|
| >TIGR00899 2A0120 sugar efflux transporter | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-30 Score=248.91 Aligned_cols=345 Identities=14% Similarity=0.141 Sum_probs=242.4
Q ss_pred CCccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHH-HHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhc
Q 010375 75 NNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASII-CGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFG 153 (512)
Q Consensus 75 ~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~-~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 153 (512)
++++|.|..+.|++.+.+.+...+.+++.|+++||+||||.++ .+.++..++.++++++++++.+++.|+++|.+.+..
T Consensus 25 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ 104 (375)
T TIGR00899 25 SEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVLLSSFASTA 104 (375)
T ss_pred HcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhhhhhh
Confidence 3345889999999999999999999999999999999988755 456666777888899999999999999999888888
Q ss_pred cchhhhhhhhcCCCCCchhH--HHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhh-ccCCChhH
Q 010375 154 NQAVPLYLSEMAPTHLRGGL--NMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGI-LLPETPNS 230 (512)
Q Consensus 154 ~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~-~~~e~p~~ 230 (512)
.|...++..|+.|+++|++. .+....+.++|.++++.+ .....+..+||+.|++.++..++..+..+ ++||+|++
T Consensus 105 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~--~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 182 (375)
T TIGR00899 105 NPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPL--AFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYPRG 182 (375)
T ss_pred HHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhH--HHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCcccC
Confidence 88888889999887777654 577888889999999998 55555667999999999888776665554 47887632
Q ss_pred HHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHH
Q 010375 231 LIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPV 310 (512)
Q Consensus 231 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (512)
..++. .+.+.++.++++..+.......+ ..........+.|.
T Consensus 183 ~~~~~----------------------------------~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 224 (375)
T TIGR00899 183 APGAL----------------------------------TRLEVRGLLASRDTRLLFVACTL----MWGCNILYIINMPL 224 (375)
T ss_pred ccccc----------------------------------CcchhhhhhcCcchHHHHHHHHH----HHHHHHHHHhhhHH
Confidence 10000 00111223333332222222211 11122333445566
Q ss_pred HH-HhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHH
Q 010375 311 LF-QSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILV 389 (512)
Q Consensus 311 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (512)
++ +++|.++.+.+..........+++.++.+++.||+++|+.+..+.++..+....+... +..+..
T Consensus 225 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 291 (375)
T TIGR00899 225 LIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAAD-------------NSLWAL 291 (375)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHH-------------HHHHHH
Confidence 65 4589998888888877777788889999999999999998877655444333322221 112333
Q ss_pred HHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHH
Q 010375 390 VVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFV 469 (512)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 469 (512)
.....+.+.+.+.. .+....+..|..|+ +++++.++.+...++|..++|.+.|.+.+..++...+...+++.+.+.+.
T Consensus 292 ~~~~~~~g~~~g~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 369 (375)
T TIGR00899 292 LMLQLLNAIFIGIL-AGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFC 369 (375)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHH
Confidence 33333444444433 23334666788875 46799999999999999999999999999888877777766666666666
Q ss_pred hhccc
Q 010375 470 YFFLP 474 (512)
Q Consensus 470 ~~~~~ 474 (512)
..+++
T Consensus 370 ~~~~~ 374 (375)
T TIGR00899 370 LLLIK 374 (375)
T ss_pred Hheec
Confidence 55553
|
This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria. |
| >PRK11043 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-30 Score=248.19 Aligned_cols=324 Identities=16% Similarity=0.195 Sum_probs=235.3
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhh
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVP 158 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 158 (512)
|+++.+.+++.+++.++..++++++|+++||+|||+++..+.++..++.+++.++++++.+++.|+++|++.+...+...
T Consensus 37 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~ 116 (401)
T PRK11043 37 QTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVGVCSAAVIWQ 116 (401)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999888888888
Q ss_pred hhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhccCCChhHHHHcCCHH
Q 010375 159 LYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKV 238 (512)
Q Consensus 159 ~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~ 238 (512)
+++.|+++++++++..+.......+|..++|.+ .....+..+||+.|++.++..++..+..++++|+++. ++.+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i--~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 190 (401)
T PRK11043 117 ALVIDRYPAQKANRVFATIMPLVALSPALAPLL--GAWLLNHFGWQAIFATLFAITLLLILPTLRLKPSKKA----RKQS 190 (401)
T ss_pred HHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCCCc----cccc
Confidence 899999999999999999988899999999998 4555566799999999888887776666666655420 0000
Q ss_pred HHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHhcCCC
Q 010375 239 EGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFK 318 (512)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 318 (512)
+.+.++++.++++..+...... ......+.....+.|.+.+++|++
T Consensus 191 ------------------------------~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~~g~s 236 (401)
T PRK11043 191 ------------------------------QDALTFKQLLKSKTYLGNVLIF----AACSAAFFAWLTGSPFILEQMGYS 236 (401)
T ss_pred ------------------------------hHHHHHHHHHcChhHHHHHHHH----HHHHHHHHHHHHHhHHHHHHcCCC
Confidence 0011233444433322211111 112223344556778888889999
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHH
Q 010375 319 GDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVL 398 (512)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (512)
+.+.++......++.+++.++.+++.||+++|+..........++...+...... ..+..+..+....+.+.
T Consensus 237 ~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~ 308 (401)
T PRK11043 237 PADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLL--------SHPSLVPLLIPFCVMAA 308 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHh--------ccCcHHHHHHHHHHHHH
Confidence 9889988888888899999999999999999887666555544444333222110 01112222333334444
Q ss_pred HhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcch
Q 010375 399 AFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKF 452 (512)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~ 452 (512)
+.+..+ +.......|..| +.++++.|+.+.....++..++.+.+.+.+....
T Consensus 309 ~~~~~~-~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~ 360 (401)
T PRK11043 309 ANGAIY-PIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALISTPLL 360 (401)
T ss_pred HHHHHH-HHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCCChh
Confidence 444333 333344446565 5799999999999999999999999988775443
|
|
| >cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-30 Score=244.37 Aligned_cols=344 Identities=22% Similarity=0.325 Sum_probs=277.0
Q ss_pred HHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhH
Q 010375 35 AIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRA 114 (512)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~ 114 (512)
.++.+...++....++. .|.+.+++ |.+..+.+++.+.+.++..++++++|+++||+|||+
T Consensus 5 ~~~~~~~~~~~~~~~~~--~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~ 65 (352)
T cd06174 5 FLGFFLSGLDRGLLSPA--LPLLAEDL-----------------GLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRR 65 (352)
T ss_pred HHHHHHHHHhhhhhHhh--HHHHHHHc-----------------CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCch
Confidence 34455566666665544 45555444 779999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHh
Q 010375 115 SIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYG 194 (512)
Q Consensus 115 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~ 194 (512)
.+..+.++..++.+++.++++++.+++.|++.|++.+...+...+++.|++|+++|++.+++......+|..+++.+ .
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~ 143 (352)
T cd06174 66 VLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLL--G 143 (352)
T ss_pred hhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHH--H
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999 4
Q ss_pred hcccCCCchhHHHHhhHHHHHHHHHHhhccCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCccc
Q 010375 195 TQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPF 274 (512)
Q Consensus 195 ~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (512)
....+..+||+.+++.++..++..+...+++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------------- 174 (352)
T cd06174 144 GLLAESLGWRWLFLILAILGLLLALLLLFLL------------------------------------------------- 174 (352)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH-------------------------------------------------
Confidence 5555666899999998888877766655432
Q ss_pred HHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHh-cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChh-H
Q 010375 275 RNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRA-L 352 (512)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~-~ 352 (512)
+.++...+..+...........+.|.+.++ .|.+..+.+.......++..++.++.+++.||+++|+ .
T Consensus 175 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 244 (352)
T cd06174 175 ----------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLL 244 (352)
T ss_pred ----------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 112333444444555567777788888777 4899999999999999999999999999999999999 8
Q ss_pred HHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHH
Q 010375 353 LISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVN 432 (512)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~ 432 (512)
+..+..+..++...+.... ..+.......+.+.+.+.. .+....+..|..|+++|++..|+.+...
T Consensus 245 ~~~~~~~~~i~~~~~~~~~-------------~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (352)
T cd06174 245 LLIGLLLAALGLLLLALAP-------------SLALLLVALLLLGFGLGFA-FPALLTLASELAPPEARGTASGLFNTFG 310 (352)
T ss_pred HHHHHHHHHHHHHHHHHhc-------------cHHHHHHHHHHHHHHHhcc-chhHHHHHHhhcCHHHHHHHHHHHHHHH
Confidence 8888777777766655431 1334444555555555533 4555688899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhhc
Q 010375 433 LFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFF 472 (512)
Q Consensus 433 ~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 472 (512)
.++..+++.+.+.+.+..++...+.+.++..+++.+....
T Consensus 311 ~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 311 SLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLLL 350 (352)
T ss_pred HHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhee
Confidence 9999999999999998888777666666666655555443
|
MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3 |
| >PRK10133 L-fucose transporter; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-30 Score=249.28 Aligned_cols=362 Identities=12% Similarity=0.116 Sum_probs=244.3
Q ss_pred HHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhch
Q 010375 33 VAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGR 112 (512)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Gr 112 (512)
...+..+..+++....+.. .|.+++++ |+++.+.|++.+.+.+++.+++++.|+++||+||
T Consensus 30 ~~~~~~~~~~~~~~~~~~~--~p~i~~~~-----------------~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~ 90 (438)
T PRK10133 30 LLCSLFFLWAVANNLNDIL--LPQFQQAF-----------------TLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSY 90 (438)
T ss_pred HHHHHHHHHHHHHHHHHHH--HHHHHHHh-----------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 3345555666666555544 56665555 8899999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHH---HhhchHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHH
Q 010375 113 RASIICGGISFLLGAALN---AAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTAN 189 (512)
Q Consensus 113 r~~l~~~~~~~~~~~~~~---~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~ 189 (512)
|+++..+.++++++.+++ .++++++.++++|+++|+|.+...+....++.|+.++++|.+.+++.+..+.+|..+++
T Consensus 91 r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~ 170 (438)
T PRK10133 91 KAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAV 170 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999886 46899999999999999999999999999999987777777789999999999999999
Q ss_pred HHHHhhccc---------------CC---------CchhHHHHhhH-HHHHHHHHHh-hccCCChhHHHHcCCHHHHHHH
Q 010375 190 MINYGTQKL---------------ET---------WGWRLSLGLAA-APALMMTVGG-ILLPETPNSLIERGKKVEGRRV 243 (512)
Q Consensus 190 ~~~~~~~~~---------------~~---------~~Wr~~f~~~~-~~~~~~~~~~-~~~~e~p~~l~~~~~~~~~~~~ 243 (512)
.++...... +. .+||++|+... +..++..+.. ..+||.+. +++.+
T Consensus 171 ~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~----~~~~~----- 241 (438)
T PRK10133 171 VFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQS----DNHSD----- 241 (438)
T ss_pred HHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc----ccccc-----
Confidence 884322100 00 25677776433 3333333322 22554321 00000
Q ss_pred HHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHH-HHh-cCCCCch
Q 010375 244 LEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVL-FQS-MGFKGDA 321 (512)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~g~~~~~ 321 (512)
+...+...+.+++++++..+...+ ..++..........|.+.+ .++ +|+++.+
T Consensus 242 ---------------------~~~~~~~~~~~~ll~~~~~~~~~l----~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ 296 (438)
T PRK10133 242 ---------------------AKQGSFSASLSRLARIRHWRWAVL----AQFCYVGAQTACWSYLIRYAVEEIPGMTAGF 296 (438)
T ss_pred ---------------------ccccchhhhHHHHHhCchHHHHHH----HHHHHHHHHHHHHHHHHHHHhhhcCCCCHHH
Confidence 000000122344555554332222 2222223333344455655 454 7999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhh
Q 010375 322 SLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFG 401 (512)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (512)
++.......++.++++++.+++.||+++|+.+..+..+..+.+.+.... + . . ..+..+.+.+++.+
T Consensus 297 ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~-----------~-~-~-~~~~~~~l~glg~~ 362 (438)
T PRK10133 297 AANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFA-----------G-G-H-VGLIALTLCSAFMS 362 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHc-----------C-C-h-HHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998887766655444333221 1 1 1 22334455666666
Q ss_pred hcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-hhhHHHHHHHHHH
Q 010375 402 WSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK-FGIFLFFAGWVTI 464 (512)
Q Consensus 402 ~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~ 464 (512)
..+... ++...+..|+ +.+++.++.. ...+|+.++|++.|.+.|..| ....+++..++.+
T Consensus 363 ~i~P~~-~s~a~~~~~~-~~~~as~l~~-~~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~ 423 (438)
T PRK10133 363 IQYPTI-FSLGIKNLGQ-DTKYGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFA 423 (438)
T ss_pred HHHHHH-HHHHHcccch-hhccchhHHh-HHhccchHHHHHHHHHHHhccchHHHHHHHHHHHH
Confidence 554443 5666777765 4667777775 455788999999999999876 4444444443333
|
|
| >PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.8e-31 Score=254.74 Aligned_cols=325 Identities=20% Similarity=0.315 Sum_probs=239.4
Q ss_pred CCccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhcc
Q 010375 75 NNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGN 154 (512)
Q Consensus 75 ~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 154 (512)
.+++|.+..+.+++.+.+.++..+++++.|+++||+|||+++..+.++.+++.++..++++++.+++.|++.|++.+...
T Consensus 24 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~ 103 (352)
T PF07690_consen 24 AEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGIGSGFFS 103 (352)
T ss_dssp HCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhcccccccccccc
Confidence 45568999999999999999999999999999999999999999999999997777777888899999999999999999
Q ss_pred chhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHh-hccCCChhHHHH
Q 010375 155 QAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGG-ILLPETPNSLIE 233 (512)
Q Consensus 155 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~-~~~~e~p~~l~~ 233 (512)
+...+++.|++|+++|++++++...+.++|.++++.+ .....+..+||+.|++.+++.++..++. .+++++|+....
T Consensus 104 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l--~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~ 181 (352)
T PF07690_consen 104 PASNALIADWFPPEERGRAFGILSAGFSLGSILGPLL--GGFLISYFGWRWAFLISAILSLIAAILFILFLPEPPPPRER 181 (352)
T ss_dssp HHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHH--HHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---STTTT-
T ss_pred ccccccccccchhhhhhhccccccchhhhhhhcccch--hhhhhhccccccccccccchhhhhhhhHhhhhhhccccccc
Confidence 9999999999999999999999999999999999999 5666677899999999999998887653 344444321100
Q ss_pred cCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCc-ccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHH-
Q 010375 234 RGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKH-PFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVL- 311 (512)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 311 (512)
+.+.++. ++.++... .++.+++++..+ ......+.....+.....+.|.+
T Consensus 182 ~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l 233 (352)
T PF07690_consen 182 ESPKESE------------------------SKKPKPLKPGFKSLFKNPVLW----ILLIAFFLFFFVFSGFSFFLPLYL 233 (352)
T ss_dssp -SSTTTT--------------------------HHHCCCH-CTHHHHHHCCH----HHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccccccc------------------------cccccccccccccccccchhh----hhhhhhhHHHHHHHHhhcccchhh
Confidence 0000000 00001111 244444444332 22222333333445577888887
Q ss_pred HHhcCCC-CchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHH
Q 010375 312 FQSMGFK-GDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVV 390 (512)
Q Consensus 312 ~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (512)
.+.+|++ ..+.+.......+..+++.++.+++.||+++|+..........+....+..... .......+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ 303 (352)
T PF07690_consen 234 QEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPF----------SSSPVWLI 303 (352)
T ss_dssp CHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHH----------HCHHHHHH
T ss_pred hhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHH----------hhhHHHHH
Confidence 5568888 688888899999999999999999999999987777666655555544433221 11223334
Q ss_pred HHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHH
Q 010375 391 VVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIA 440 (512)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~ 440 (512)
....+.+.+.+.. .+....+..|..|+++++++.|+.+...++++.++|
T Consensus 304 ~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 304 IALFLIGFGFGIV-FPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHH-CHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 4445555555544 444467888999999999999999999999999887
|
These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A. |
| >PRK10473 multidrug efflux system protein MdtL; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-29 Score=245.27 Aligned_cols=319 Identities=16% Similarity=0.208 Sum_probs=222.7
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhh
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVP 158 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 158 (512)
|.+..+.++..+.+.++..+++++.|+++||+|||+++..+.++..++.+++.++++++.+++.|+++|++.+...+...
T Consensus 34 ~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 113 (392)
T PRK10473 34 NASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAF 113 (392)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999899999
Q ss_pred hhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHh-hccCCChhHHHHcCCH
Q 010375 159 LYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGG-ILLPETPNSLIERGKK 237 (512)
Q Consensus 159 ~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~-~~~~e~p~~l~~~~~~ 237 (512)
+++.|++|+++|++++++......+|..++|.+ +....+..+||+.|++.++.+++..++. +++||+++.. +++.
T Consensus 114 ~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i--~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~ 189 (392)
T PRK10473 114 AILRDTLDDRRRAKVLSLLNGITCIIPVLAPVL--GHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETRPAR--APAA 189 (392)
T ss_pred HHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCCcc--cCCc
Confidence 999999999999999999999999999999998 4444456799999999888777665554 4467764210 0000
Q ss_pred HHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHH-HhcC
Q 010375 238 VEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLF-QSMG 316 (512)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g 316 (512)
. .. ....++.++++..........+ ..........+.|.+. +++|
T Consensus 190 ~----------------~~--------------~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g 235 (392)
T PRK10473 190 S----------------SK--------------PRENSESLLNRFFLSRLVITTL----SVTVILTFVNTSPVLLMEQMG 235 (392)
T ss_pred c----------------ch--------------HHHHHHHHhCHHHHHHHHHHHH----HHHHHHHHHHhCHHHHHHHcC
Confidence 0 00 0011122222222111111111 1111223334455554 4589
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHH
Q 010375 317 FKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLF 396 (512)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (512)
+++.+.+......+++.+++.++.+++.||+++|+.+..+..+..++...+..... .+.......+.
T Consensus 236 ~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~l~ 302 (392)
T PRK10473 236 FSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPS-------------HAVSLFGITLI 302 (392)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHH
Confidence 99888898899999999999999999999999999988887776666655554321 11222222333
Q ss_pred HHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhh
Q 010375 397 VLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGI 454 (512)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~ 454 (512)
..+.+.++.. ....+..|.++|+ |.......++..+++.+.+.+.+..++..
T Consensus 303 ~~g~~~~~~~---~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g~~~ 354 (392)
T PRK10473 303 CAGFSVGFGV---AMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLGISA 354 (392)
T ss_pred HHHHHHHhHH---HHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 3333322221 2223444544443 34444555677777777777777777544
|
|
| >PRK11010 ampG muropeptide transporter; Validated | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-29 Score=248.57 Aligned_cols=351 Identities=14% Similarity=0.140 Sum_probs=241.5
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhh-----chhHH-HHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHhhh
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDY-----GRRAS-IICGGISFLLGAALNAAA---ANLAMLLTGRILLGVG 149 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~-----Grr~~-l~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~ 149 (512)
|.+..++|.+ +.....+ ++.+++|+++||+ |||+. +..+.+..+++...+++. ++++.+.+.+++.|++
T Consensus 43 g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~ 120 (491)
T PRK11010 43 NIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFC 120 (491)
T ss_pred CCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHH
Confidence 7788888886 3344443 6899999999999 99985 667777777887777775 4788899999999999
Q ss_pred hhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccC-CCchhHHHHhhHHHHHHHHHHhhccCCCh
Q 010375 150 IGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLE-TWGWRLSLGLAAAPALMMTVGGILLPETP 228 (512)
Q Consensus 150 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~-~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p 228 (512)
.+...+...+++.|++|+++|+++.++...+..+|.++++.+ .....+ ..|||..|++.++..++..+..++.||++
T Consensus 121 ~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l--~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~~~e~~ 198 (491)
T PRK11010 121 SASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGL--ALWLADRYLGWQGMYWLMAALLIPCIIATLLAPEPT 198 (491)
T ss_pred HHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHH--HHHHHhcccCHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 999999999999999999999999999999999999999988 444445 46999999999888877766666678865
Q ss_pred hHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhH
Q 010375 229 NSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYA 308 (512)
Q Consensus 229 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (512)
+.. ++ ++. . + ++...++++.++++..+....... ...........+.
T Consensus 199 ~~~---~~-~~~---------------~-~---------~~~~~~l~~~~~~~~~~~~ll~~~----l~~~~~~~~~~~~ 245 (491)
T PRK11010 199 DTI---PV-PKT---------------L-E---------QAVVAPLRDFFGRNNAWLILLLIV----LYKLGDAFAMSLT 245 (491)
T ss_pred ccc---cc-ccc---------------h-h---------hhHHHHHHHHHcCcCHHHHHHHHH----HHHHHHHHHHHHH
Confidence 210 00 000 0 0 000123444554443322222221 1111222233344
Q ss_pred HHH-HHhcCCCCchhhHHHH-HHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchh
Q 010375 309 PVL-FQSMGFKGDASLYSSA-MTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFS 386 (512)
Q Consensus 309 ~~~-~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (512)
+.+ .++.|++..+.+.... ...++.+++.++.|+++||+++|+.+..+.++..+....+...... .+..
T Consensus 246 ~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~---------~~~~ 316 (491)
T PRK11010 246 TTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSIT---------DKNL 316 (491)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc---------cccH
Confidence 444 4568999999998874 5567999999999999999999887776655544443332221110 0111
Q ss_pred hHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHH
Q 010375 387 ILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMT 466 (512)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 466 (512)
+.......+.....+.+.... +++..+..+++.+++..++.+....+|..+++.+.|.+.|..|+...+.+..++.+.+
T Consensus 317 ~~l~~~~~l~~~~~g~~~~~~-~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~ 395 (491)
T PRK11010 317 YSMGAAVFFENLCGGMGTAAF-VALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPG 395 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHH
Confidence 222222233222222222222 4666788888899999999999999999999999999999999888888777777777
Q ss_pred HHHhhccccC
Q 010375 467 IFVYFFLPET 476 (512)
Q Consensus 467 ~~~~~~~~~~ 476 (512)
++.....+++
T Consensus 396 l~~~~~~~~~ 405 (491)
T PRK11010 396 LLLLLVCRQT 405 (491)
T ss_pred HHHHHHHHhc
Confidence 7666666543
|
|
| >PRK11102 bicyclomycin/multidrug efflux system; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=244.35 Aligned_cols=319 Identities=18% Similarity=0.203 Sum_probs=223.3
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhh
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVP 158 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 158 (512)
|+++.+.+++.+.+.++..++.+++|+++||+|||+++..+.++.+++.+++.++++++.+++.|++.|++.+...+...
T Consensus 22 ~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 101 (377)
T PRK11102 22 GVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGLAAAAASVVIN 101 (377)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHh-hccCCChhHHHHcCCH
Q 010375 159 LYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGG-ILLPETPNSLIERGKK 237 (512)
Q Consensus 159 ~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~-~~~~e~p~~l~~~~~~ 237 (512)
+++.|++|+++|++++++......+|..++|.+ .....+..+||+.|++.++++++..+.. +++||+++.. +.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 175 (377)
T PRK11102 102 ALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPII--GGWLLVWFSWHAIFWVLALAAILAAALVFFFIPETLPKE----RR 175 (377)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCccCccc----cc
Confidence 999999999999999999999999999999998 4555556789999999888777665544 4577764210 00
Q ss_pred HHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHH-HhcC
Q 010375 238 VEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLF-QSMG 316 (512)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g 316 (512)
++ . +.++ ...++++.++++.. +...+..+...........+.|.+. +.+|
T Consensus 176 ~~-------------~--~~~~----------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 226 (377)
T PRK11102 176 QP-------------F--HLRT----------TIRNFASLFRHKRV----LGYMLASGFSFAGMFSFLTAGPFVYIELNG 226 (377)
T ss_pred CC-------------C--ChHH----------HHHHHHHHHcChHH----HHHHHHHHHHHHHHHHHHHcCHHHHHHHhC
Confidence 00 0 0000 01122334433332 2222222223333344444555554 4489
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHH
Q 010375 317 FKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLF 396 (512)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (512)
+++.+.+.......++.+++.++.+++.||+++|+.+..+..+..+....+...... ....+.......+.
T Consensus 227 ~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~ 297 (377)
T PRK11102 227 VSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALL---------DLGFWALVVGVAAF 297 (377)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH---------hhhHHHHHHHHHHH
Confidence 999999999999999999999999999999999998888776544433333222100 01112222222222
Q ss_pred HHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHH-HHHHHHHHHH
Q 010375 397 VLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNL-FFTFVIAQIF 443 (512)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~-~g~~~~~~~~ 443 (512)
....+... +.......|..| +.++++.++.+.... ++..+++.+.
T Consensus 298 ~~~~~~~~-~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~ 343 (377)
T PRK11102 298 VGCVSMIS-SNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLS 343 (377)
T ss_pred HHHHHHhh-HHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222 222344556666 788999998877654 4555555443
|
|
| >KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5e-30 Score=245.96 Aligned_cols=293 Identities=17% Similarity=0.138 Sum_probs=223.4
Q ss_pred HHHHHHHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHHhhhhhh
Q 010375 28 IVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVT 107 (512)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~ 107 (512)
++++..+++..+....|...++.+... . .++|.++...+.+.+.++++++++++.+++|.+.
T Consensus 44 l~i~~~~~~~y~~~~~d~~si~~a~l~-----g-------------~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~ 105 (495)
T KOG2533|consen 44 LFILPFLCYLYFHAYLDKSSIVNASLS-----G-------------LKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLG 105 (495)
T ss_pred HHHHHHHHHHHHHHhcchhcchhHHHc-----C-------------CccccchhhhhhhhHHHHHHHHHHHHHhhHHHHH
Confidence 444445556666666666554433211 1 2677789999999999999999999999999999
Q ss_pred hhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHH
Q 010375 108 RDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFT 187 (512)
Q Consensus 108 dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~ 187 (512)
||++-.+.+....+++++..++....+|++.+++.|++.|+.++..+|....+++.|+.++||++.++++.+..++|.++
T Consensus 106 ~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ 185 (495)
T KOG2533|consen 106 DRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIF 185 (495)
T ss_pred HhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHH
Confidence 99999999999999999999888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcc----cCCCchhHHHHhhHHHHHHHHHHhh-ccCCChh--HHHHcCCHHHHHHHHHHHcCCchhhHHHHHH
Q 010375 188 ANMINYGTQK----LETWGWRLSLGLAAAPALMMTVGGI-LLPETPN--SLIERGKKVEGRRVLEKIRGTKEVNAEYQDM 260 (512)
Q Consensus 188 ~~~~~~~~~~----~~~~~Wr~~f~~~~~~~~~~~~~~~-~~~e~p~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (512)
|.+++++... ....||||.|++.++++++..++.+ ++|+.|. |...+.+++-..+ +.
T Consensus 186 ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~----------------~~ 249 (495)
T KOG2533|consen 186 GGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELVVE----------------RL 249 (495)
T ss_pred HHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhccccchHHHHHHHH----------------HH
Confidence 9999877433 2336999999999999988776655 4899985 2111111110000 00
Q ss_pred HHHHHhh---cccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHh-cCCCCchhhHHHHHHHHHHHHH
Q 010375 261 VDASELA---NSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASS 336 (512)
Q Consensus 261 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~ 336 (512)
++..... +.++..+++.++.+. ++...+..++.....+.+.+|+|.++++ .|++..++..+..+..++++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~a~~dp~----vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~ 325 (495)
T KOG2533|consen 250 RESPSGGIENKFKWKGFKEALKDPG----VWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVG 325 (495)
T ss_pred HhccCCCcccccCHHHHHHHHhchh----HHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHH
Confidence 0000000 012233444444444 5666777777777788899999999998 6799999999999999999999
Q ss_pred HHHHHHHHhhc----CChhHHHHhhH
Q 010375 337 TLISIATVDKL----GRRALLISGGI 358 (512)
Q Consensus 337 ~~~~g~l~d~~----~~r~~~~~~~~ 358 (512)
.+++|+++||. .+|........
T Consensus 326 ~i~ag~lsdr~~~~~~~~~~~~~~~~ 351 (495)
T KOG2533|consen 326 LILAGYLSDRLKTIFARRLLFIVFLC 351 (495)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 99999999994 44444444333
|
|
| >PRK15011 sugar efflux transporter B; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-28 Score=237.73 Aligned_cols=343 Identities=13% Similarity=0.098 Sum_probs=225.7
Q ss_pred CccccCcchhHHHHHHHHH-HHHHHHHhhhhhhhhhchhHHH-HHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhc
Q 010375 76 NYCKYDNQGLAAFTSSLYL-AGLVASFVASPVTRDYGRRASI-ICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFG 153 (512)
Q Consensus 76 ~~~~~s~~~~g~~~s~~~l-~~~i~~~~~g~l~dr~Grr~~l-~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 153 (512)
+++|++.+++|++.+...+ +..++.+++++ +||+||||.+ ..+.++.+++..+.+++++++.+++.+.+.|...+..
T Consensus 44 ~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 122 (393)
T PRK15011 44 DEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTA 122 (393)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhh
Confidence 3458899999999876655 55566655555 9999999875 5566666788888889999998876665555445667
Q ss_pred cchhhhhhhhcCCCCCc--hhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhh-ccCCChhH
Q 010375 154 NQAVPLYLSEMAPTHLR--GGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGI-LLPETPNS 230 (512)
Q Consensus 154 ~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~-~~~e~p~~ 230 (512)
.+....++.|+.++++| +...++.+.+.++|.+++|++ +....+..|||..|++.++.+++..+..+ ++||.++.
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i--~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 200 (393)
T PRK15011 123 NPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPL--AYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKE 200 (393)
T ss_pred HHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHH--HHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccCCC
Confidence 78888888888776655 344578888999999999999 55566677999999998887776655544 47876520
Q ss_pred HHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHH
Q 010375 231 LIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPV 310 (512)
Q Consensus 231 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (512)
++ ++. ++ .... .++++ ..+...... ......+..+..+.|.
T Consensus 201 ----~~-~~~---------------------------~~-~~~~---~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~p~ 241 (393)
T PRK15011 201 ----LP-LAT---------------------------GT-LEAP---RRNRR--DTLLLFVIC-TLMWGTNSLYIINMPL 241 (393)
T ss_pred ----Cc-ccc---------------------------cc-cccc---ccccc--cHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 00 000 00 0000 01111 011111111 1122233445567777
Q ss_pred HHHh-cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHH
Q 010375 311 LFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILV 389 (512)
Q Consensus 311 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (512)
+.++ +|+++.+.+.......+..+++.++.|+++||+++|+.+..+.....+........ +..+..
T Consensus 242 ~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 308 (393)
T PRK15011 242 FIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMA-------------HSPAIL 308 (393)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH-------------hhHHHH
Confidence 7654 89998888888887778888899999999999999987776554443332222111 112222
Q ss_pred HHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHH
Q 010375 390 VVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFV 469 (512)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 469 (512)
+....+.....+..... ...+..|..|+ .++++.++.+...++|..++|.+.|.+.+..++...+....++.+.+++.
T Consensus 309 l~~~~l~~~~~g~~~~~-~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~ 386 (393)
T PRK15011 309 LGLQLLNAIYIGILGGI-GMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFC 386 (393)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 22222222222222111 23455788885 59999999999999999999999999999888877777767666666666
Q ss_pred hhcccc
Q 010375 470 YFFLPE 475 (512)
Q Consensus 470 ~~~~~~ 475 (512)
+++.|+
T Consensus 387 ~~~~~~ 392 (393)
T PRK15011 387 LLRIKD 392 (393)
T ss_pred HHhhcC
Confidence 666654
|
|
| >PRK11195 lysophospholipid transporter LplT; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-29 Score=240.62 Aligned_cols=342 Identities=12% Similarity=0.068 Sum_probs=236.2
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhh
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVP 158 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 158 (512)
+.+..+.+++.+.+.+++.++++++|+++||+|||++++.+.++.+++++++.++.+. ++.|+++|++.+...|...
T Consensus 34 ~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~ 110 (393)
T PRK11195 34 HYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKY 110 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
Confidence 6688899999999999999999999999999999999999999999999888877664 7889999999999999999
Q ss_pred hhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhccCCChhHHHHcCCHH
Q 010375 159 LYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKV 238 (512)
Q Consensus 159 ~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~ 238 (512)
+++.|++|+++|++++++......+|.++||.++ +...+. .|+..+.+.+...++..+....+||+|++...++.
T Consensus 111 a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lg--G~l~~~-~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~-- 185 (393)
T PRK11195 111 GILTELLPGEKLVKANGWMEGSTIAAILLGTVLG--GALADP-HAEAALAVCALIYLLAALFNLFIPRLGARRPGQSW-- 185 (393)
T ss_pred HHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCcccccccCC--
Confidence 9999999999999999999999999999999994 443332 37777777666555555555668887632110000
Q ss_pred HHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHh-cCC
Q 010375 239 EGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS-MGF 317 (512)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~ 317 (512)
+..+ ...+. +..++.+++++..+.......+... ......+..|.+.++ +|.
T Consensus 186 ~~~~-------------~~~~~----------~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~lg~ 238 (393)
T PRK11195 186 NPIA-------------LLRDF----------FHACRVLWRDKLGRFSLAGTTLFWG----AGATLRFLVLAWAPVALGI 238 (393)
T ss_pred CHHH-------------HHHHH----------HHHHHHHHhCchhHHHHHHHHHHHH----HHHHHHHHHHHHHHHHcCC
Confidence 0000 00000 0112344444443332222222111 223334444555554 899
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHH
Q 010375 318 KGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFV 397 (512)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (512)
++.+.+......+++.+++.++.+++.||.++++.+..+.. ..+....+... +..+.......+.+
T Consensus 239 s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~-------------~~~~~~~~~~~~~G 304 (393)
T PRK11195 239 TLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQ-------------HSLLPAYPLLILIG 304 (393)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHH-------------hHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988877766542 22222222211 11233334444555
Q ss_pred HHhhhcccceeeeeecccCChhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhh
Q 010375 398 LAFGWSWGPLGWTVPSEIFPLET-RSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYF 471 (512)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~p~~~-~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 471 (512)
.+.+....+. .+...+..|++. +|++.++.+...+++..++..+.+.+ +..+-...+.+.+++.+..+....
T Consensus 305 ~~~g~~~~~~-~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 377 (393)
T PRK11195 305 ALGGFFVVPM-NALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLVALAMAL 377 (393)
T ss_pred HhhhhhhhhH-HHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHH
Confidence 5555444444 455567655554 79999999999999999999998855 667766666665555555444443
|
|
| >PRK11646 multidrug resistance protein MdtH; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-29 Score=241.03 Aligned_cols=320 Identities=13% Similarity=0.098 Sum_probs=229.5
Q ss_pred ccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccch
Q 010375 77 YCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQA 156 (512)
Q Consensus 77 ~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 156 (512)
++|+|..+.|++.+.+.++..+.++++|+++||+|||+++..+.++.+++.+++.++++++.+++.|+++|++.+...+.
T Consensus 40 ~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~ 119 (400)
T PRK11646 40 QLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPP 119 (400)
T ss_pred HhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Confidence 34889999999999999999999999999999999999999999999999999999999999999999999999888888
Q ss_pred hhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHh-hccCCChhHHHHcC
Q 010375 157 VPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGG-ILLPETPNSLIERG 235 (512)
Q Consensus 157 ~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~-~~~~e~p~~l~~~~ 235 (512)
..+++.|++|+++|++++++.....++|..+||.++ +... ..+||+.|++.++..++..++. ++.||.+. .
T Consensus 120 ~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~--g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~-----~ 191 (400)
T PRK11646 120 RTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLG--SWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAYKL-----S 191 (400)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCcccc-----c
Confidence 999999999999999999999999999999999994 4333 4689999999887776655443 34554320 0
Q ss_pred CHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHhc
Q 010375 236 KKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSM 315 (512)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (512)
+.+ ++.+.++++.++++.... ..+..+...........+.|.+.++.
T Consensus 192 ~~~-----------------------------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~p~~~~~~ 238 (400)
T PRK11646 192 TVR-----------------------------TPVREGMTRVLRDKRFVT----YVLTLTGYYMLAVQVMLMLPIMVNDI 238 (400)
T ss_pred ccc-----------------------------hhhHHHHHHHHcCchHHH----HHHHHHHHHHHHHHHHHhhhhhHHhh
Confidence 000 000112334444443221 11111111112223455778888776
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHh-hcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHH
Q 010375 316 GFKGDASLYSSAMTGAVLASSTLISIATVD-KLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVIC 394 (512)
Q Consensus 316 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (512)
+.++.+.+......+++...+....+++.| |++.++.+..+..+..++..++... +..+.......
T Consensus 239 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~-------------~~~~~~~~~~~ 305 (400)
T PRK11646 239 AGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMV-------------SNLQQLFTLIC 305 (400)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHh-------------hhHHHHHHHHH
Confidence 557778888877777766655555566555 4565666666665555555444332 11222333333
Q ss_pred HHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 010375 395 LFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK 451 (512)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g 451 (512)
+.+.+.+.. .|...+++.+..|+++|+++.|+.+....+|..++|.+.|.+.|+.+
T Consensus 306 l~~~g~~~~-~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~ 361 (400)
T PRK11646 306 LFYIGSIIA-EPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGK 361 (400)
T ss_pred HHHHHHHHH-HccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHh
Confidence 344444423 33335677899999999999999999999999999999999998753
|
|
| >TIGR00885 fucP L-fucose:H+ symporter permease | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-28 Score=236.69 Aligned_cols=345 Identities=13% Similarity=0.113 Sum_probs=243.4
Q ss_pred HHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhch
Q 010375 33 VAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGR 112 (512)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Gr 112 (512)
+++...+..+++.+..++. +|.+++++ |++..+.|++.+.+.+++.+++++.|++.||+||
T Consensus 7 ~~~~~f~~~G~~~~~~~~l--~~~~~~~~-----------------~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~ 67 (410)
T TIGR00885 7 LITSLFALWGFANDITNPM--VPQFQQAF-----------------TLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSY 67 (410)
T ss_pred HHHHHHHHHHHHHHhHHHH--HHHHHHHh-----------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 3455566777777777666 56666665 8899999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHh---hchHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHH
Q 010375 113 RASIICGGISFLLGAALNAA---AANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTAN 189 (512)
Q Consensus 113 r~~l~~~~~~~~~~~~~~~~---~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~ 189 (512)
|+++..+.++++++.+++.. .++++.+++.|++.|+|.|...+....++.+..|+++|++.+++.+...++|..+++
T Consensus 68 r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~ 147 (410)
T TIGR00885 68 KAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGM 147 (410)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988654 468999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccc------------------------CCCchhHHHHhhHHHHHHHHHHhhc--cCCChhHHHHcCCHHHHHHH
Q 010375 190 MINYGTQKL------------------------ETWGWRLSLGLAAAPALMMTVGGIL--LPETPNSLIERGKKVEGRRV 243 (512)
Q Consensus 190 ~~~~~~~~~------------------------~~~~Wr~~f~~~~~~~~~~~~~~~~--~~e~p~~l~~~~~~~~~~~~ 243 (512)
.++...... +..+||++|++.+++.++..++..+ .||.++ + ++
T Consensus 148 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~-----~--~~---- 216 (410)
T TIGR00885 148 VVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNH-----S--DA---- 216 (410)
T ss_pred HHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-----c--cc----
Confidence 885433211 1136999999988877765554433 443220 0 00
Q ss_pred HHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHhc--CCCCch
Q 010375 244 LEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSM--GFKGDA 321 (512)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~ 321 (512)
++.+.+.+.+++++++..+. ..+..++..........+.+.+.++. +.+...
T Consensus 217 ----------------------~~~~~~~~~~~~~~~~~~~~----~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~ 270 (410)
T TIGR00885 217 ----------------------KQISFSASLSRLARIRHYRE----GVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGF 270 (410)
T ss_pred ----------------------ccccchhhHHHHHhChhHHH----HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHH
Confidence 00000112233444443222 22233333333444556677776654 333334
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhh
Q 010375 322 SLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFG 401 (512)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (512)
+............+|+++.+++.||+++|+.+.+...+..+..++..... .......+.+.+.+.+
T Consensus 271 a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~--------------~~~~~~~l~~~glf~s 336 (410)
T TIGR00885 271 AANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAG--------------GHVGLYCLTLCSAFMS 336 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcC--------------ChHHHHHHHHHHHHHH
Confidence 44455566678899999999999999999988777666666555554421 1123444555556666
Q ss_pred hcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 010375 402 WSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSF 450 (512)
Q Consensus 402 ~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~ 450 (512)
..+ |..+....+..+++.+..+.++.... +|+.+.|++.|.+.|..
T Consensus 337 ~~f-p~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p~l~G~~~d~~ 382 (410)
T TIGR00885 337 LMF-PTIYGIALKGLGQDTKYGAAGLVMAI--IGGGIVPPLQGFIIDMK 382 (410)
T ss_pred HHH-HHHHHHHHhhhhhhhhhhHHHHHHHH--hccchHHHHHHHHHHHh
Confidence 555 55567777888877655455555543 99999999999999954
|
This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector. |
| >PRK11652 emrD multidrug resistance protein D; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-28 Score=237.00 Aligned_cols=321 Identities=16% Similarity=0.190 Sum_probs=225.7
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhh
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVP 158 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 158 (512)
|+|+.+.+++.+.+.++..++++++|+++||+|||+++..+.++..++.+++.++++++.+++.|++.|++.+...+...
T Consensus 39 ~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~ 118 (394)
T PRK11652 39 NVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMAR 118 (394)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999988888888
Q ss_pred hhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHH-hhccCCChhHHHHcCCH
Q 010375 159 LYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVG-GILLPETPNSLIERGKK 237 (512)
Q Consensus 159 ~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~-~~~~~e~p~~l~~~~~~ 237 (512)
.+..|.+++++|+++.++...+..+|..++|.+ .....+..+||+.|++.++..++..+. .++.||+++.. ++.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i--~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 193 (394)
T PRK11652 119 TLPRDLYEGTQLRHANSLLNMGILVSPLLAPLI--GGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRPAD---ARR 193 (394)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCccc---cch
Confidence 889999999999999999999999999999998 445556678999999988776655443 44578765210 000
Q ss_pred HHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHh-cC
Q 010375 238 VEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS-MG 316 (512)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g 316 (512)
++ .+..+++.++++..+...... +........+..+.+.+.++ +|
T Consensus 194 ~~------------------------------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~g 239 (394)
T PRK11652 194 TR------------------------------VLASYRTLLSNRRFNCYLLML----IGTLAGIAVFEACSGVLMGAVLG 239 (394)
T ss_pred hH------------------------------HHHHHHHHHcChHHHHHHHHH----HHHHHHHHHHHHhChHHHHHHcC
Confidence 00 011223344443332222211 11222233334445556665 89
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHH
Q 010375 317 FKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLF 396 (512)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (512)
+++.+.++......++.+++.++.+++.||.+++... ......++...+...... .....+.......+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 309 (394)
T PRK11652 240 LSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQ--SVICCLLAGLLMWIPGWF--------GVMNVWTLLVPAALF 309 (394)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHh--------ccccHHHHHHHHHHH
Confidence 9988888888888888888999999999998733222 222222222222111100 001123334444445
Q ss_pred HHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 010375 397 VLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSF 450 (512)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~ 450 (512)
+.+.+... +....+..|..| +.++++.++.+....+|..+++.+.+.+....
T Consensus 310 ~~g~~~~~-~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~ 361 (394)
T PRK11652 310 FFGAGMLF-PLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQTG 361 (394)
T ss_pred HHHHHHHH-HHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence 55555333 333456667777 57899999999999999999999988776543
|
|
| >PRK10054 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.7e-29 Score=238.30 Aligned_cols=335 Identities=9% Similarity=0.025 Sum_probs=234.7
Q ss_pred ccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccch
Q 010375 77 YCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQA 156 (512)
Q Consensus 77 ~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 156 (512)
++|++..+.|++.+.+.++..+++++.|+++||+|||+++..+.++..++.++.+++++++.+++.|++.|.+.+...+.
T Consensus 37 ~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 116 (395)
T PRK10054 37 QYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTV 116 (395)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 34899999999999999999999999999999999999999999999999999999999999999999999888877888
Q ss_pred hhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhh-ccCCChhHHHHcC
Q 010375 157 VPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGI-LLPETPNSLIERG 235 (512)
Q Consensus 157 ~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~-~~~e~p~~l~~~~ 235 (512)
..++..|.+|+++|++++++.....++|.+++|.++. .... .+||..|++.++..++..+... ++||+++. +
T Consensus 117 ~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~--~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~----~ 189 (395)
T PRK10054 117 LKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGT--LLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSEKA----I 189 (395)
T ss_pred HHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHH--HHHH-hccCcHHHHHHHHHHHHHHHHHHHHhccccc----c
Confidence 8999999999999999999999999999999999954 3333 5899999988887777654443 35554310 0
Q ss_pred CHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHH---
Q 010375 236 KKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLF--- 312 (512)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 312 (512)
+.++ + + ..+.++.++++..+.......+..+ .+.....+.+.+.
T Consensus 190 ~~~~----------------------~--~-----~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~ 236 (395)
T PRK10054 190 ATET----------------------G--S-----VWSPSVLLQDKALLWFTCSGFLASF----VSGAFASCISQYVMVV 236 (395)
T ss_pred ccch----------------------h--h-----hhhhhhhccCceehHHHHHHHHHHH----HHHHhhhhHHHHHHHh
Confidence 0000 0 0 0011334444443222222222111 1222223334443
Q ss_pred HhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHH
Q 010375 313 QSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVV 392 (512)
Q Consensus 313 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (512)
++.+.+....+.......+.........+++.||.++|+.+..+..+..++...+.... +..+...+.
T Consensus 237 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~------------~~~~~~~~~ 304 (395)
T PRK10054 237 ADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSG------------NSLLLWGMS 304 (395)
T ss_pred cccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcc------------hHHHHHHHH
Confidence 23455555666777777777777778889999999999988887766666655444321 112223333
Q ss_pred HHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHH
Q 010375 393 ICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIM 465 (512)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 465 (512)
..+.+.+.. ...|.....+.+..|++.++++.+..+ ...+|..++|.+.|.+.|+.++...+....++...
T Consensus 305 ~~~~~~g~~-~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~ 375 (395)
T PRK10054 305 AAVFTVGEI-IYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVA 375 (395)
T ss_pred HHHHHHHHH-HHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHH
Confidence 444444433 223444566778889999999988655 67789999999999999999876665554444433
|
|
| >TIGR00896 CynX cyanate transporter | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-28 Score=231.53 Aligned_cols=316 Identities=16% Similarity=0.135 Sum_probs=225.9
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhh
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVP 158 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 158 (512)
|++.++.+++.+.+.++..+++++.|+++||+|||+++..+.++..++.+.+ .+++++.+++.|++.|++.+...+...
T Consensus 31 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~g~~~~~~~~~ 109 (355)
T TIGR00896 31 GMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALIGVGIAIINVLLP 109 (355)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHhccch
Confidence 8999999999999999999999999999999999999999999988888887 788999999999999999998888888
Q ss_pred hhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCC--CchhHHHHhhHHHHHHHHHHhhccCCChhHHHHcCC
Q 010375 159 LYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLET--WGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGK 236 (512)
Q Consensus 159 ~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~--~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~ 236 (512)
.++.|+++ ++|++++++...+.++|..+++.+. ....+. .+||+.|.+.++..++... .++|+.++ +.+
T Consensus 110 ~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~--~~l~~~~~~~w~~~f~~~~~~~~~~~~--~~~~~~~~----~~~ 180 (355)
T TIGR00896 110 SLIKRDFP-QRVGLMTGLYSMALMGGAALAAAAT--VPLAQHSGGHWQQALAWWALPALLALL--AWIPQVRR----RVA 180 (355)
T ss_pred HHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHHHH--HHhhhhcc----ccC
Confidence 88999886 6899999999999999999998884 333332 2499999877665444322 22343321 000
Q ss_pred HHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHhcC
Q 010375 237 KVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMG 316 (512)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 316 (512)
++++..+.+.++.++++.. +...+..+.....+.....+.|.++++.|
T Consensus 181 ----------------------------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~lp~~~~~~g 228 (355)
T TIGR00896 181 ----------------------------ANQTTTRLTPVRIWRSPLA----WQVTVFFGLQSGLYYSLIGWLPAILISHG 228 (355)
T ss_pred ----------------------------CCCCCCCCCCchhhcCHhH----HHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 0000011223344444332 22222233333345566778898888899
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHhhcC-ChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHH
Q 010375 317 FKGDASLYSSAMTGAVLASSTLISIATVDKLG-RRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICL 395 (512)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (512)
++..+.+...+...++.++++++.+++.||++ ||+.+..+..+..++...+.... .. .... ...+
T Consensus 229 ~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~--~~~~-~~~l 294 (355)
T TIGR00896 229 ASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAP-----------MH--GLWA-WALV 294 (355)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhh-----------hh--HHHH-HHHH
Confidence 99999999999999999999999999999994 56566666665555554444321 11 1111 2334
Q ss_pred HHHHhhhcccceeeeeec-ccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 010375 396 FVLAFGWSWGPLGWTVPS-EIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK 451 (512)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g 451 (512)
.+.+.+..+ +....... +..+++.++...++.+...+++..++|.+.|.+.|+.+
T Consensus 295 ~g~~~g~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 295 LGLGQGGAF-PLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHhhhhHh-HHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 444444332 22223333 33456778899999999999999999999999999876
|
This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate. |
| >TIGR00902 2A0127 phenyl proprionate permease family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-28 Score=233.38 Aligned_cols=354 Identities=14% Similarity=0.082 Sum_probs=250.9
Q ss_pred HHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHH
Q 010375 36 IGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRAS 115 (512)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~ 115 (512)
+..+......+...|. +|.+.+++ |+|..++|++.+.+.+...++++++|+++||+|||+.
T Consensus 11 ~~~~~~~~~~~~~~p~--l~~~l~~~-----------------g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~ 71 (382)
T TIGR00902 11 LGFFGYFCAYGIFLPF--FPAWLKGI-----------------GLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIII 71 (382)
T ss_pred HHHHHHHHHHHHHHHH--HHHHHHHc-----------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHH
Confidence 4444555555555444 45555554 8899999999999999999999999999999998543
Q ss_pred H----HHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHH
Q 010375 116 I----ICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMI 191 (512)
Q Consensus 116 l----~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~ 191 (512)
. ..+..+..+ ..+..+++++.+++.|+++|.+.+...|...++..++ +++|++..+......++|.+++|++
T Consensus 72 ~~~~~~~~~~l~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l 147 (382)
T TIGR00902 72 ALRLLALASAIFAA--AFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSAL 147 (382)
T ss_pred HHHHHHHHHHHHHH--HHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHH
Confidence 3 222222222 3445678999999999999999988889888887665 4678999999999999999999999
Q ss_pred HHhhcccCCCchhHHHHhhHHHHHHHHHHhhccCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccC
Q 010375 192 NYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIK 271 (512)
Q Consensus 192 ~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (512)
++...+..|||..|++.++..++..+ .+.++|+++. +++.++ .+++..
T Consensus 148 --~g~l~~~~g~~~~f~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~--------------------------~~~~~~ 195 (382)
T TIGR00902 148 --FGGLIGMFDEQNILAILTAGLAFMLI-GFLIKPTIPP---KDAIPE--------------------------DESQGD 195 (382)
T ss_pred --HHHHHHHcChhHHHHHHHHHHHHHHH-HHHcCCCCCC---Cccccc--------------------------cccccc
Confidence 56666778999999887655333333 3333433200 000000 000111
Q ss_pred cccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChh
Q 010375 272 HPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRA 351 (512)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~ 351 (512)
.+.++++|++.. +...+..+...........+.|.++++.|.++.+.+.......+..+++..+.+++.||+++|+
T Consensus 196 ~~~~~~l~~~~~----~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~ 271 (382)
T TIGR00902 196 SAFIALLKNPMN----LRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARD 271 (382)
T ss_pred hhHHHHHcChHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHH
Confidence 234455555443 2223333333344556666778888889999999999999999999999999999999999999
Q ss_pred HHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHH-
Q 010375 352 LLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVA- 430 (512)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~- 430 (512)
.+.++.+...+........ ++.+..+....+.+..++...... ..++++. |++++++++++.+.
T Consensus 272 ~l~~~~~~~~~~~~~~~~~-------------~~~~~~~~~q~l~g~~~~~~~~~~-~~~i~~~-~~~~~~~~q~~~~~~ 336 (382)
T TIGR00902 272 LLLISAIACVGRWAIIGAI-------------EAFPLIFLLQILHCGTFAVCHLAA-MRYIAAQ-PGSEIAKLQALYNAL 336 (382)
T ss_pred HHHHHHHHHHHHHHHHHhH-------------hhHHHHHHHHHHHHHHHHHHHHHH-HHHHHhC-CHhhHHHHHHHHHHH
Confidence 9998888888777666543 223455556677777777655444 5677777 99999999999874
Q ss_pred HHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHH
Q 010375 431 VNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVT 463 (512)
Q Consensus 431 ~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 463 (512)
...+|..++|.+.|.+.|+.+...++..+.+.+
T Consensus 337 ~~g~g~~~g~~~~G~l~~~~g~~~~~~~~~~~~ 369 (382)
T TIGR00902 337 AMGGLIAIFTAFAGFIYPTLGAGTFVFMAIIAA 369 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 567899999999999999998755555444443
|
This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules. |
| >TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-28 Score=235.15 Aligned_cols=323 Identities=13% Similarity=0.135 Sum_probs=216.0
Q ss_pred ccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhc-hHHHHHHHHHHHhhhhhhccc
Q 010375 77 YCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAA-NLAMLLTGRILLGVGIGFGNQ 155 (512)
Q Consensus 77 ~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~~~~ 155 (512)
++|+|+.+.+++.+.+.+++.++++++|+++||+|||+++..+.++..++.+++++++ +++.+++.|+++|++.+ ..+
T Consensus 31 ~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~ 109 (366)
T TIGR00886 31 DLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAGG-SFA 109 (366)
T ss_pred HhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhch-hhH
Confidence 3499999999999999999999999999999999999999999999999999999999 99999999999999865 456
Q ss_pred hhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcc--------cCCCchhHHH-HhhHHHHHHHH-HHhhccC
Q 010375 156 AVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQK--------LETWGWRLSL-GLAAAPALMMT-VGGILLP 225 (512)
Q Consensus 156 ~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~--------~~~~~Wr~~f-~~~~~~~~~~~-~~~~~~~ 225 (512)
....++.|++|+++|++++++.....++|..+++.++..... ....+||+.| +..++...+.. +...+.+
T Consensus 110 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 189 (366)
T TIGR00886 110 SCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGA 189 (366)
T ss_pred hHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHHHHHHhcc
Confidence 678899999999999999999997777777766665321111 0134899999 44454444433 3344467
Q ss_pred CChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHH
Q 010375 226 ETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSIL 305 (512)
Q Consensus 226 e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (512)
|+|+.. ++++ +... .+.. . . .+++......+.++++.. +...+..+..........
T Consensus 190 ~~~~~~----~~~~-~~~~---~~~~-~--~---------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 245 (366)
T TIGR00886 190 DTPPGK----PATG-KLSF---KGAR-W--S---------VGTGALGDQLKVFRDRHT----WILALLYSVTFGSFLGVS 245 (366)
T ss_pred cCCccc----ccch-hccc---cccc-c--c---------ccchhHHHHHHHHhccch----hhHHHHHHHHHHHHHHHH
Confidence 665311 0000 0000 0000 0 0 000000022334444332 222223333333445566
Q ss_pred hhHHHHHHh-cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccc
Q 010375 306 FYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKS 384 (512)
Q Consensus 306 ~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (512)
.+.|.++++ +|+++.+++.......+..++++++.+++.||+++|+.+..+......+..++..... +..
T Consensus 246 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 316 (366)
T TIGR00886 246 SIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLV---------SPL 316 (366)
T ss_pred HHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCC---------Ccc
Confidence 777777765 7999999998888899999999999999999999988777666555554444433210 000
Q ss_pred hhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHH
Q 010375 385 FSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFF 435 (512)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g 435 (512)
..+.......+.....+..... .+...++..| +++|++.|+.+..+++|
T Consensus 317 ~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 317 SLAVFIVLFVALFFFSGAGNGS-TFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred hHHHHHHHHHHHHHHhccccch-hhhcchhhch-hhcccHHHHHHHhccCC
Confidence 2223333333444444444333 3567778877 68999999999887765
|
|
| >PRK11128 putative 3-phenylpropionic acid transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.7e-27 Score=224.89 Aligned_cols=324 Identities=12% Similarity=0.064 Sum_probs=225.5
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchh----HHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhcc
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRR----ASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGN 154 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr----~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 154 (512)
|.|..++|++.+++.++..++++++|+++||+||| +.+.++..+. .......+++++.+++.|++.|++.+...
T Consensus 35 g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~l~g~~~~~~~ 112 (382)
T PRK11128 35 GYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFGAHSFWLLFVAIGLFNLFFSPLV 112 (382)
T ss_pred CCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHhcccHHHHHHHHHHHHHHHcccc
Confidence 88999999999999999999999999999999984 3333222222 22334456889999999999999999888
Q ss_pred chhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhccCCChhHHHHc
Q 010375 155 QAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIER 234 (512)
Q Consensus 155 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~ 234 (512)
+...++..++ .++|+++.+......++|.++||++ ++...++.|||..|++.++..++..+...+.||+++ +
T Consensus 113 ~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~l--gg~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~----~ 184 (382)
T PRK11128 113 PLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSAL--TGKLVSWFGEQAILWILTAGVASMLLGQLLRPTIMP----Q 184 (382)
T ss_pred cHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHH--HHHHHHHcChhHHHHHHHHHHHHHHHHHHccCCCCC----c
Confidence 8888887776 4568888899999999999999999 666667779999998877655544444444555321 0
Q ss_pred CCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHh
Q 010375 235 GKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS 314 (512)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (512)
++.+ +..++...+++++++++..+.... ..+...........+.|.+.++
T Consensus 185 ~~~~--------------------------~~~~~~~~~~~~i~~~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~ 234 (382)
T PRK11128 185 GESR--------------------------QQESAGWPAWKALLKEPTVWRFLL----CVSLLQGSHAAYYGFSAIYWQA 234 (382)
T ss_pred cccc--------------------------cccccccchHHHHHcChhHHHHHH----HHHHHHHHhHhHHHHHHHHHHH
Confidence 0000 000011234566666655332222 2222222334455566777778
Q ss_pred cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHH
Q 010375 315 MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVIC 394 (512)
Q Consensus 315 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (512)
.|.+..+.+.......+..++..++.+++.||+++|+.+..+.+...++...+... +..+..+...+
T Consensus 235 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~ 301 (382)
T PRK11128 235 AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGST-------------TALPWLIVIQI 301 (382)
T ss_pred CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhh-------------hhHHHHHHHHH
Confidence 99998889999898889999999999999999999999888877766665544332 22344455555
Q ss_pred HHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHH-HHHHHHHHHHHHHHHHhhcchhhHHH
Q 010375 395 LFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAV-NLFFTFVIAQIFLTLLCSFKFGIFLF 457 (512)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~-~~~g~~~~~~~~~~~~~~~g~~~~~~ 457 (512)
+.+.+.+...... ..+..+. +++++++..+..+.. ..+|..++|.+.|.+.|..+...++.
T Consensus 302 l~g~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~~~~~~ 363 (382)
T PRK11128 302 LHCGTFTVCHLAA-MRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGAGVFWV 363 (382)
T ss_pred HHHHHHHHHHHHH-HHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 5666555443333 4555565 566678888887644 56777899999999999988754443
|
|
| >PRK11902 ampG muropeptide transporter; Reviewed | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.4e-27 Score=226.22 Aligned_cols=367 Identities=14% Similarity=0.135 Sum_probs=242.4
Q ss_pred HhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhh-----c
Q 010375 37 GGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDY-----G 111 (512)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~-----G 111 (512)
.++.++...+....+ +|.+.++- |+|.+++|++...... .+..+++|+++||+ |
T Consensus 7 l~~~~~~~~~~~~~~--~~~~l~~~-----------------g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g 65 (402)
T PRK11902 7 LGFASGLPLALTSGT--LQAWMTVE-----------------GLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLG 65 (402)
T ss_pred HHHHHhhhHHHHHHH--HHHHHHHc-----------------CCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCC
Confidence 344556666555544 56666554 8899999999777775 69999999999999 8
Q ss_pred hhH-HHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHH
Q 010375 112 RRA-SIICGGISFLLGAALNAAA---ANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFT 187 (512)
Q Consensus 112 rr~-~l~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~ 187 (512)
||| .+..+.++.+++..+.++. .+++.+++..++.+++.+...+...+++.|++|+++|+++.++...+.++|.++
T Consensus 66 ~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~ 145 (402)
T PRK11902 66 RRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLV 145 (402)
T ss_pred cchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHH
Confidence 875 7888888888888887776 357778888888888899999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccCC-CchhHHHHhhHHHHHHHHHHhhccCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHh
Q 010375 188 ANMINYGTQKLET-WGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASEL 266 (512)
Q Consensus 188 ~~~~~~~~~~~~~-~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (512)
++.+ .....+. .|||..|++.++..++..+..++.||+++.. ++.++. .
T Consensus 146 g~~l--~~~l~~~~~gw~~~f~i~a~~~l~~~l~~~~~~e~~~~~---~~~~~~-----------------~-------- 195 (402)
T PRK11902 146 SGGL--ALWLADRVLGWGNTYLLMAGLMLAGALTTLWAPEPEVPA---RPPRSL-----------------G-------- 195 (402)
T ss_pred HhHH--HHHHHhcccCHHHHHHHHHHHHHHHHHHHHhcCCCcccc---cccchh-----------------H--------
Confidence 9988 4444443 5999999998887776666556677765310 000000 0
Q ss_pred hcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHH-HHHHHHHHHHHHHHh
Q 010375 267 ANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTG-AVLASSTLISIATVD 345 (512)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~g~l~d 345 (512)
++.+.+++++++++..+.......+...... .......+.+.+++|+++.+.++.....+ ++.+++.++.+++.|
T Consensus 196 -~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~---~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~ 271 (402)
T PRK11902 196 -EAVVGPLRDFFSRRGAWALLLLIVLYKLGDA---FAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMV 271 (402)
T ss_pred -HHHHHHHHHHHhCcCHHHHHHHHHHHHhHHH---HHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 0011234556666554433332222221111 11123334455668999988888876655 468899999999999
Q ss_pred hcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHH----HHHHHhhhcccceeeeeecccCChhhh
Q 010375 346 KLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVIC----LFVLAFGWSWGPLGWTVPSEIFPLETR 421 (512)
Q Consensus 346 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~p~~~~ 421 (512)
|+++|+.+..+..+..+..+.+...... .+..+....... ..+...+ ........++.+.+|.+.+
T Consensus 272 r~g~~~~l~~~~~~~~l~~l~~~~~~~~---------~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~ 341 (402)
T PRK11902 272 RLGLYRSLMLFGVLQAVSNLGYWVLAVT---------PKHLWTMALAIGIENLCGGMGTA-AFVALLMALCNRSFSATQY 341 (402)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHhc---------CCcHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCCCcHHHH
Confidence 9999988776665554444333222110 011222222222 1222222 2223334566777776544
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhhc
Q 010375 422 SAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFF 472 (512)
Q Consensus 422 ~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 472 (512)
+..+....++..+++.+.|.+.|..|+...+...+++.+.+++....
T Consensus 342 ----~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~ 388 (402)
T PRK11902 342 ----ALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWL 388 (402)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 45555566777767778999999999887777777666665555433
|
|
| >TIGR00889 2A0110 nucleoside transporter | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-26 Score=224.63 Aligned_cols=351 Identities=9% Similarity=0.051 Sum_probs=227.8
Q ss_pred CccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhch-hHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhcc
Q 010375 76 NYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGR-RASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGN 154 (512)
Q Consensus 76 ~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Gr-r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 154 (512)
+++|++..++|++.+++.++..++++++|.++||+|| |+++.++.++..++..+..+.++++.+++.|++.|++.+...
T Consensus 31 ~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 110 (418)
T TIGR00889 31 KTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLANSLAYMPTI 110 (418)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHccHH
Confidence 3458899999999999999999999999999999965 778888898888898899999999999999999999877666
Q ss_pred chhhhhhh--------hcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhccCC
Q 010375 155 QAVPLYLS--------EMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPE 226 (512)
Q Consensus 155 ~~~~~~i~--------~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e 226 (512)
+...++.. |......|.|..| .+|.++++.++ +.......|+ +|++.++..++..++.+++||
T Consensus 111 ~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~--g~l~~~~~~~-~f~~~~~~~~~~~~~~~~~~e 181 (418)
T TIGR00889 111 ALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAV--SLLDIELSNI-QLYITAGSSALLGVFALTLPD 181 (418)
T ss_pred HHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHH--HHhcccchhH-HHHHHHHHHHHHHHHHhcCCC
Confidence 66655432 2222234555555 35677777773 2222223454 455666666665555667888
Q ss_pred ChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHh
Q 010375 227 TPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILF 306 (512)
Q Consensus 227 ~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (512)
+|+. +++.+. +. .+..+.+.++.+|++.....+.. .+...........
T Consensus 182 ~~~~---~~~~~~----------------~~---------~~~~~~~~~~~~k~~~~~~~~~~----~~~~~~~~~~~~~ 229 (418)
T TIGR00889 182 IPVA---KSTAKM----------------SI---------KVMLGLDAFILFKNKRMAIFFFF----SMLLGAPLQITNI 229 (418)
T ss_pred CCCC---cccccc----------------CH---------HHHhhhhHHHHhcCCCeeeHHHH----HHHHHhHHHHHHH
Confidence 7621 000000 00 00001122334444442222222 2222222233445
Q ss_pred hHHHHHHhcCCCC--------chhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCC
Q 010375 307 YAPVLFQSMGFKG--------DASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPN 378 (512)
Q Consensus 307 ~~~~~~~~~g~~~--------~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (512)
+.+.+.++.|.++ ...+...+...+..+++.+..+++.||+|+|+.+..+.++..++..++....
T Consensus 230 ~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~------- 302 (418)
T TIGR00889 230 FGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGD------- 302 (418)
T ss_pred hHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcC-------
Confidence 5566676666543 5568888888999999999999999999999999888887766655444321
Q ss_pred cccccc-hhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHhhcc-----
Q 010375 379 QELSKS-FSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITV-AVNLFFTFVIAQIFLTLLCSFK----- 451 (512)
Q Consensus 379 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~-~~~~~g~~~~~~~~~~~~~~~g----- 451 (512)
+.. ..+..+...++.+.+.+.. .+....++.|.+|++.|++++|+.+ ....+|.+++|.+.|.+.++.+
T Consensus 303 ---~~~~~~~~l~l~~~l~g~~~~~~-~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~ 378 (418)
T TIGR00889 303 ---PEYFGYALLFLSMIVYGCAFDFF-NISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTF 378 (418)
T ss_pred ---cchhhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCC
Confidence 001 1122333444455444433 2333467789999999999999997 5678999999999999999853
Q ss_pred -hhhHHHH-HHHHHHHHHHHhhccccCCC
Q 010375 452 -FGIFLFF-AGWVTIMTIFVYFFLPETKG 478 (512)
Q Consensus 452 -~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 478 (512)
|...+.. +++..+.++..+++++++++
T Consensus 379 ~~~~~f~~~~~~~~i~~~l~~~~~~~~~~ 407 (418)
T TIGR00889 379 DWQTMWLFFAGYIAILAVLFMIFFKYSHN 407 (418)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 5544444 44445555555566666543
|
This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli. |
| >KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-28 Score=236.22 Aligned_cols=373 Identities=18% Similarity=0.208 Sum_probs=269.4
Q ss_pred cccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHH-HHHHhhhhhhccch
Q 010375 78 CKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTG-RILLGVGIGFGNQA 156 (512)
Q Consensus 78 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-r~l~G~~~~~~~~~ 156 (512)
++.+.++++|+.++..-.+.+.+++.+.+.||||.|++.+.|.++..++.++.+|++++|.+++. -++.|+|.|..+..
T Consensus 76 f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~p 155 (509)
T KOG2504|consen 76 FGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLP 155 (509)
T ss_pred hCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcc
Confidence 37788999999999999999999999999999999999999999999999999999999988875 68899999999999
Q ss_pred hhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhcc-CCChhHHHHcC
Q 010375 157 VPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILL-PETPNSLIERG 235 (512)
Q Consensus 157 ~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~-~e~p~~l~~~~ 235 (512)
...++..|| +|+|+.+.|+...+.++|.++-|.+ .-.+.+..|||+.+++.+.+.+-..+....+ |.+++....
T Consensus 156 aiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l--~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~-- 230 (509)
T KOG2504|consen 156 AVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPL--LKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPN-- 230 (509)
T ss_pred hhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHH--HHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCch--
Confidence 999999888 5789999999999999999999988 5666778899999999888876655555443 322211111
Q ss_pred CHHHHHHHHHHH-----------c-CCchhhH-----HHHHHHHHHHhhc--ccCccc----HHHhcccchhHHHHHHHH
Q 010375 236 KKVEGRRVLEKI-----------R-GTKEVNA-----EYQDMVDASELAN--SIKHPF----RNILERRNRPQLVMAIFM 292 (512)
Q Consensus 236 ~~~~~~~~~~~~-----------~-~~~~~~~-----~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~ 292 (512)
.++..+..... . .++.... +....++..++.. ..+... .++++++ .++.+.+
T Consensus 231 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~----~fl~~~~ 305 (509)
T KOG2504|consen 231 -EEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDP----KFLLLAL 305 (509)
T ss_pred -hhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCc----hHHHHHH
Confidence 00000000000 0 0000000 0000000000000 011111 2444443 3566666
Q ss_pred HHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhH--HHHhhHHHHHHHHHHHHH
Q 010375 293 PMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRAL--LISGGIQMITCQVIVSII 370 (512)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~--~~~~~~~~~~~~~~~~~~ 370 (512)
...+...++.....++|.+.++.+++..++..+.++.++..++++++.|++.|+...++. ..++.+..+++...+...
T Consensus 306 ~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~ 385 (509)
T KOG2504|consen 306 SNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFA 385 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 666667778888899999999999999999999999999999999999999999874433 344444444443222222
Q ss_pred HhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 010375 371 LGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSF 450 (512)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~ 450 (512)
...+..+....+++.+.+ .+..+....+.|+.+.++-..+.|+...+..++..++|++.|.+.|..
T Consensus 386 -------------~~~~~l~~~~~~fG~~~g-~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~t 451 (509)
T KOG2504|consen 386 -------------TTYVGLIVFSILFGFCVG-SFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDIT 451 (509)
T ss_pred -------------ccHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeecc
Confidence 112334444444444444 444444457789999999999999999999999999999999999988
Q ss_pred c-hhhHHHHHHHHHHHHHHHhhccc
Q 010375 451 K-FGIFLFFAGWVTIMTIFVYFFLP 474 (512)
Q Consensus 451 g-~~~~~~~~~~~~~~~~~~~~~~~ 474 (512)
+ |...+.+.+++.+.+..+++..+
T Consensus 452 g~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 452 GNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred CCeeeehhhcChHHHHHHHHHHHhH
Confidence 8 88888888888888887777766
|
|
| >PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-25 Score=217.72 Aligned_cols=349 Identities=18% Similarity=0.173 Sum_probs=221.1
Q ss_pred CcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhh
Q 010375 81 DNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLY 160 (512)
Q Consensus 81 s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 160 (512)
+.....|+.+.+.++.+++.++.|+++|.||||.+++.+.++..+|+++++-++|...++.+..+.|+|.|... .....
T Consensus 76 ~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~-~~~~~ 154 (599)
T PF06609_consen 76 GSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQE-LAALA 154 (599)
T ss_pred CCccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHH-HHHHH
Confidence 45677899999999999999999999999999999999999999999999999999999999999999987766 45666
Q ss_pred hhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhc--cCCChhHHHHcC-CH
Q 010375 161 LSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGIL--LPETPNSLIERG-KK 237 (512)
Q Consensus 161 i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~--~~e~p~~l~~~~-~~ 237 (512)
++|..|.|.|....++...........++.++ .....+.+|||.|++.++...+.+++.++ .|++.+.+..++ .+
T Consensus 155 isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia--~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP~~~~~~~~~~s~ 232 (599)
T PF06609_consen 155 ISELVPNKWRGLGLAIASIPFIITTWISPLIA--QLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPPPRAQLHGRKLSK 232 (599)
T ss_pred HHHhcccchhhhHhHHHHHHHHhhhcccHHHH--HHhccCCCcchHHHHHHHHHHHHHHHHHHHhCCCchhhhccccCcH
Confidence 89999999998887777766555555677774 33344568999999998887776655433 343322111111 12
Q ss_pred HHHHHHHHHHc----------------CCchhhHHHHHHH-------------H--HHHhhcccCcc--cHHHhcccchh
Q 010375 238 VEGRRVLEKIR----------------GTKEVNAEYQDMV-------------D--ASELANSIKHP--FRNILERRNRP 284 (512)
Q Consensus 238 ~~~~~~~~~~~----------------~~~~~~~~~~~~~-------------~--~~~~~~~~~~~--~~~~~~~~~~~ 284 (512)
.+..+.++.+. -......+++..+ - --+.....+.+ -.++++++
T Consensus 233 ~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~~~~~~Pl~P~~Lf~~~--- 309 (599)
T PF06609_consen 233 REQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWFGAPKDPLFPHRLFKDR--- 309 (599)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhhccCCCCcCCHHHhccc---
Confidence 22222222210 0000000000000 0 00000111222 23344432
Q ss_pred HHHHHHHHHHHHHhhchhHHHhhHHHHHH-hcCCCCc---hhhHHHHHHHHHHHHHHHHHHHHHhhcCChh-HHHHhhHH
Q 010375 285 QLVMAIFMPMFQILTGINSILFYAPVLFQ-SMGFKGD---ASLYSSAMTGAVLASSTLISIATVDKLGRRA-LLISGGIQ 359 (512)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~---~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~-~~~~~~~~ 359 (512)
+.+...++..+.....++....+.|.... -++-++. ..++.....+++..++.++.+.+..++++-| .++.+.++
T Consensus 310 r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~ 389 (599)
T PF06609_consen 310 RGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVL 389 (599)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHH
Confidence 22333333333333334555555555443 3555543 5677888888889999999999999887744 44555555
Q ss_pred HHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHH
Q 010375 360 MITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVI 439 (512)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~ 439 (512)
+.+++.++.... + ++....+...++.+.+.+....+. ...++-..|++..+++.|+..+++.+|+.++
T Consensus 390 ~ta~~Gama~~~----------~-~n~~~~i~~~~l~g~giG~~~~~~-~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg 457 (599)
T PF06609_consen 390 MTAFCGAMAAVR----------P-DNKNAAIAFLVLAGFGIGGILVPA-IVIAQLIVPDEDIGTATGLTGSIRSIGGSIG 457 (599)
T ss_pred HHHHHHHHHHcc----------C-CCcchHHHHHHHHHHhHHHHHHHH-HHeeEeeeCchHHHHHHHHHHHHHHHhhHHH
Confidence 544444333321 1 111223344445555555444333 3555567799999999999999999999999
Q ss_pred HHHHHHHH
Q 010375 440 AQIFLTLL 447 (512)
Q Consensus 440 ~~~~~~~~ 447 (512)
..++..+.
T Consensus 458 ~aIy~~I~ 465 (599)
T PF06609_consen 458 YAIYNAIF 465 (599)
T ss_pred HHHHHHHH
Confidence 98886544
|
Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes []. |
| >PRK09528 lacY galactoside permease; Reviewed | Back alignment and domain information |
|---|
Probab=99.95 E-value=6e-26 Score=221.36 Aligned_cols=351 Identities=13% Similarity=0.067 Sum_probs=212.3
Q ss_pred ccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHH---hhch-----HHHHHHHHHHHhh
Q 010375 77 YCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNA---AAAN-----LAMLLTGRILLGV 148 (512)
Q Consensus 77 ~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~~~~-----~~~l~~~r~l~G~ 148 (512)
++|++..+.|++.+.+.++..++++++|+++||+|||++++++..+.+++..... .++. ....++++++.|.
T Consensus 40 ~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (420)
T PRK09528 40 INGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGF 119 (420)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 3489999999999999999999999999999999999999887666554433221 1111 1112233444444
Q ss_pred hhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhcc-CCC
Q 010375 149 GIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILL-PET 227 (512)
Q Consensus 149 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~-~e~ 227 (512)
+.....+....+..+ . .+++++.++......++|..++++++ +...+ .+|++.|++.++++++..++.++. +|+
T Consensus 120 ~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~--g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 194 (420)
T PRK09528 120 GFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIA--GILFN-INPQINFWLGSGSALILLVLLFFAKPDA 194 (420)
T ss_pred hhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHH--HHHHh-cCchHhHHHHHHHHHHHHHHHhcccccc
Confidence 333333333333322 2 34567788888888899999999984 33333 389999999888887776666654 333
Q ss_pred hhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhh
Q 010375 228 PNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFY 307 (512)
Q Consensus 228 p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (512)
++....+++ + + .++++......++.++++..+...+..... ...+.....+
T Consensus 195 ~~~~~~~~~--~----------------------~-~~~~~~~~~~~~~~l~~~~~~~l~l~~~~~----~~~~~~~~~~ 245 (420)
T PRK09528 195 PSTAKVANA--L----------------------G-ANASAVSLKDALALLKLPKFWFLVLYVIGV----ACFYDVFDQQ 245 (420)
T ss_pred cchhhhccc--h----------------------h-cccccccHHHHHHHccCCCeEeehHHHHHH----HHHHHHHHHH
Confidence 310000000 0 0 000000011122344444322222211111 1122223333
Q ss_pred HHHHHHh----cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCccccc
Q 010375 308 APVLFQS----MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSK 383 (512)
Q Consensus 308 ~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (512)
.|.+..+ .+.+....+.......+...++.++.+++.||+++|+.+..+.++..+...++.+.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~------------- 312 (420)
T PRK09528 246 FPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFA------------- 312 (420)
T ss_pred HHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhc-------------
Confidence 4444333 35555677888888888999999999999999999999888777766665555432
Q ss_pred chhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHH-HHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHH
Q 010375 384 SFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSI-TVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWV 462 (512)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~-~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~ 462 (512)
++.+..+....+.+...+.... ....+..|.+|++.+++..+. .++...+|.+++|.+.|.+.|..|+...+...+++
T Consensus 313 ~~~~~~~~~~~l~g~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~ 391 (420)
T PRK09528 313 TGPLEVSILKLLHAFEVPFLLV-GVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGI 391 (420)
T ss_pred ccHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHH
Confidence 1123333333333333332222 224566788899999887765 56778899999999999999998877666655444
Q ss_pred HH-HHHHHhhcccc
Q 010375 463 TI-MTIFVYFFLPE 475 (512)
Q Consensus 463 ~~-~~~~~~~~~~~ 475 (512)
.+ ..++.....++
T Consensus 392 ~~i~~~~~~~~~~~ 405 (420)
T PRK09528 392 VLLFTLISVFTLSG 405 (420)
T ss_pred HHHHHHHHHHHhcC
Confidence 44 33334334443
|
|
| >KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.1e-27 Score=205.98 Aligned_cols=340 Identities=14% Similarity=0.086 Sum_probs=217.5
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhh
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVP 158 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 158 (512)
+.+....|.+.+.|.+++.+.++.+|.++||||||+++++|++..++...+.+.+.||..++++|++.|+..| ...+..
T Consensus 64 ~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kg-nl~v~r 142 (451)
T KOG2615|consen 64 GASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKG-NLSVIR 142 (451)
T ss_pred cccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC-chHHHH
Confidence 4577889999999999999999999999999999999999999999999999999999777778999999876 456889
Q ss_pred hhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHh----hHHHHHH-HHHHhhccCCChhHHHH
Q 010375 159 LYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGL----AAAPALM-MTVGGILLPETPNSLIE 233 (512)
Q Consensus 159 ~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~----~~~~~~~-~~~~~~~~~e~p~~l~~ 233 (512)
++++|.+++|+|+++++.....+++|.++||.++..........=+++|.. ..+.+.. .....+++||+-+ .
T Consensus 143 AiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~---~ 219 (451)
T KOG2615|consen 143 AIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETLP---L 219 (451)
T ss_pred HHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCcccc---c
Confidence 999999999999999999999999999999999544433111111222333 2233333 3345577899832 2
Q ss_pred cCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchh---HHHHHHHHHHHHHhhchhHHHhhHHH
Q 010375 234 RGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRP---QLVMAIFMPMFQILTGINSILFYAPV 310 (512)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (512)
+++.++..+..+. .+.+.+..... ........+++... ...-.+.+..+.+...+..+.++.+.
T Consensus 220 rk~~~~~~~~~~~----~~~~~~~~~~~---------~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~ 286 (451)
T KOG2615|consen 220 RKRNDEHSTLQEA----ADDRLALLKFA---------RIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLF 286 (451)
T ss_pred hhhcccccchhhh----hhhhhhhcchh---------hhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 2222111000000 00000000000 00000111111111 11122233333333334444445444
Q ss_pred HH-HhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcC--ChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhh
Q 010375 311 LF-QSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLG--RRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSI 387 (512)
Q Consensus 311 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~--~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (512)
+. +.+|+++.+.|.+.+..++.+.+.+....+..+|.+ .+-.+..+..++.-.++++... ..+.
T Consensus 287 l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~-------------~~~~ 353 (451)
T KOG2615|consen 287 LTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLA-------------RTPV 353 (451)
T ss_pred hhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhcc-------------ccch
Confidence 43 348999999999999999988888887777777765 3333333333322222222211 1122
Q ss_pred HHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 010375 388 LVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCS 449 (512)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~ 449 (512)
.......+..+........+ ..+.....|.++||+++|+....+.++-++||.+.|.+...
T Consensus 354 ~l~~~s~l~sf~~A~~vt~L-t~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~W 414 (451)
T KOG2615|consen 354 VLYLGSTLKSFSTASVVTCL-TSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSW 414 (451)
T ss_pred hhhHHHHHHHHHHHHhhHHH-HHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEE
Confidence 33334444444444333334 56777889999999999999999999999999999877654
|
|
| >PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-25 Score=220.00 Aligned_cols=345 Identities=16% Similarity=0.129 Sum_probs=250.3
Q ss_pred CcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhh-----chHHHHHHHHHHHhhhhhhccc
Q 010375 81 DNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAA-----ANLAMLLTGRILLGVGIGFGNQ 155 (512)
Q Consensus 81 s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~l~G~~~~~~~~ 155 (512)
|+..++++..+..+...+.++++|.++||++|||+++.+-++.++..+..++. .+.+.+++.-++.|++.+...|
T Consensus 43 S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~P 122 (524)
T PF05977_consen 43 SPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNP 122 (524)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 78899999999999999999999999999999999999988877665554432 4778899999999999999999
Q ss_pred hhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhccCCChhHHHHcC
Q 010375 156 AVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERG 235 (512)
Q Consensus 156 ~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~ 235 (512)
+..+++.|..|+++...++++.+...++..++||.+ ++.+....|-.+.|.+.++..++.+......+..++ .+.
T Consensus 123 A~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPal--gG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~---~~~ 197 (524)
T PF05977_consen 123 AWQAIIPELVPKEDLPAANALNSISFNIARIIGPAL--GGILVAFFGAAAAFLINALSFLISILALLRWKPPPP---PSS 197 (524)
T ss_pred HHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc---ccc
Confidence 999999999999999999999999999999999999 455445556778888877766555444444432220 000
Q ss_pred CHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHh-
Q 010375 236 KKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS- 314 (512)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 314 (512)
..+| ...+..+..++-+.+++..+..+....+ .......+...+|.+.++
T Consensus 198 ~~~e-------------------------~~~~~l~~G~ryv~~~~~l~~~l~~~~~----~~l~~~a~~aLlPl~a~~~ 248 (524)
T PF05977_consen 198 LPRE-------------------------RFFSALREGLRYVRSSPPLRSVLLRSFL----FNLFASAVWALLPLFARDV 248 (524)
T ss_pred cchh-------------------------hhhhhHHHHHHHHhcchHHHHHHHHHHH----HHHhhhHHHHhhhHHHHHH
Confidence 0000 0000112223323333332222221111 112223344557887765
Q ss_pred cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHH
Q 010375 315 MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVIC 394 (512)
Q Consensus 315 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (512)
+|.++...|++.+..+++.++|.++.+++.+|+++++.+..+.+..+++.+.+.+. ++.+.....++
T Consensus 249 l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~-------------~~~~~~~~~l~ 315 (524)
T PF05977_consen 249 LGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALS-------------PSFWLALIALF 315 (524)
T ss_pred hCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcc-------------hHHHHHHHHHH
Confidence 88999999999999999999999999999999999888888877777666655553 22344455555
Q ss_pred HHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhhcc
Q 010375 395 LFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFL 473 (512)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 473 (512)
+.+.+........ .+..++..|++.||+++++..+....+..+|..+.|.+.+..|....+..++++++++.++....
T Consensus 316 l~G~~~~~~~~~~-~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~~ 393 (524)
T PF05977_consen 316 LAGAAWIIANSSL-NTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALRF 393 (524)
T ss_pred HHHHHHHHHHHHH-HHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHh
Confidence 5565555444333 46778999999999999999999999999999999999999997766666666555555554443
|
EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function []. |
| >PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.3e-26 Score=249.35 Aligned_cols=334 Identities=13% Similarity=0.072 Sum_probs=228.5
Q ss_pred chhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHH---HHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhh
Q 010375 83 QGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIIC---GGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPL 159 (512)
Q Consensus 83 ~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~---~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 159 (512)
...++..+++.+.++++++++|+++||+|||+++.. +.++..+..+.+...++++.++++|+++|++.+...|+..+
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a 131 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYS 131 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHH
Confidence 457888999999999999999999999999997533 32333333333344589999999999999999999999999
Q ss_pred hhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhccCCChhHHHHcCCHHH
Q 010375 160 YLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVE 239 (512)
Q Consensus 160 ~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~ 239 (512)
++.+++++++|++++++.+++.++|.++||++ ++.+....+|++.|+..++..++.+++.+++|+++.. .++...+
T Consensus 132 ~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 207 (1140)
T PRK06814 132 ILPDHLNKDELLGANALVEAGTFIAILLGTII--GGLATISGNFVILVALLMGIAVLGWLASLFIPKTGNA--APDLKID 207 (1140)
T ss_pred hhHhhcCccccchhhHHHHHHHHHHHHHHHHH--HHHHHhccccHHHHHHHHHHHHHHHHHHhhCCCCCCC--CCCCeec
Confidence 99999999999999999999999999999999 5555567799999966666666666666667765420 0000000
Q ss_pred HHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHh-cCCC
Q 010375 240 GRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS-MGFK 318 (512)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~ 318 (512)
. ....+ ....++.+.+++.. +...+..+........+..+.|.++++ +|.+
T Consensus 208 ~--------------~~~~~----------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~ 259 (1140)
T PRK06814 208 R--------------NIIRS----------TITLLKYAKADKRI----WLAILGISWFWLVGAVVLSQLPLLAKETLGGD 259 (1140)
T ss_pred c--------------chHHH----------HHHHHHHHhcCchH----HHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCc
Confidence 0 00000 01123344444442 223333332333334556677888766 8999
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCc-------ccccchhhHHHH
Q 010375 319 GDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQ-------ELSKSFSILVVV 391 (512)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 391 (512)
+...+++.+..+++.+++.++.+++.++..+++.+..+.++..++.+.+.+.......... .......+..++
T Consensus 260 ~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (1140)
T PRK06814 260 ENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILI 339 (1140)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHH
Confidence 9999999999999999999999999988777666555555444443333221000000000 000022334444
Q ss_pred HHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 010375 392 VICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCS 449 (512)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~ 449 (512)
..++++++.+....+. .+++.+..|++.+|+++|+.++...++..+++.+.+.+.+.
T Consensus 340 ~~~~~g~~~~~~~~~~-~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~ 396 (1140)
T PRK06814 340 DLFGLAAAGGLYIVPL-FAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQAL 396 (1140)
T ss_pred HHHHHHHHHHHhHHHH-HHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4555555555444443 67888999999999999999999999999999999988754
|
|
| >TIGR00901 2A0125 AmpG-related permease | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.4e-26 Score=216.96 Aligned_cols=319 Identities=13% Similarity=0.101 Sum_probs=216.8
Q ss_pred cccCcchhHHHHHHHHHHHHHHHHhhhhhhhhh-----chhHH-HHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHhh
Q 010375 78 CKYDNQGLAAFTSSLYLAGLVASFVASPVTRDY-----GRRAS-IICGGISFLLGAALNAAA---ANLAMLLTGRILLGV 148 (512)
Q Consensus 78 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~-----Grr~~-l~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~ 148 (512)
+|+|.+++|++.+. .+...+ .+++|+++||+ ||||. ++.+.++.++.....++. .+.+.+....++.++
T Consensus 18 ~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~~~~~~ 95 (356)
T TIGR00901 18 KNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGLAFLIAF 95 (356)
T ss_pred cCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHH
Confidence 38999999999755 455555 89999999998 89886 567788888887777777 466677778888899
Q ss_pred hhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCc--------hhHHHHhhHHHHHHHHHH
Q 010375 149 GIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWG--------WRLSLGLAAAPALMMTVG 220 (512)
Q Consensus 149 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~--------Wr~~f~~~~~~~~~~~~~ 220 (512)
+.+...+...+++.|++|+++|+++.++...+..+|.++++.+ ........+ ||..|++.++..++..+.
T Consensus 96 ~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l--~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~ 173 (356)
T TIGR00901 96 FSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSL--ALVLASPEFANTGLITLWGYIFFWTALLILPGLLV 173 (356)
T ss_pred HHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHH--HHHHhhhcccccccccccHHHHHHHHHHHHHHHHH
Confidence 8998899999999999999999999999999999999999998 444444445 999999998887776665
Q ss_pred hhc-cCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhh
Q 010375 221 GIL-LPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILT 299 (512)
Q Consensus 221 ~~~-~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (512)
.++ .||+++. +.+.++ +. ++.+.+++++++++..++....... .+....
T Consensus 174 ~~~~~~e~~~~---~~~~~~----------------~~----------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 223 (356)
T TIGR00901 174 TLFLAKEPQED---ASVPKP----------------LT----------QAVLKPIREFFQRKNMIQALLLLLL-IVLYKL 223 (356)
T ss_pred HHHhccCCCcc---cccchh----------------HH----------HHHHHHHHHHHHhcCchHHHHHHHH-HHHHHH
Confidence 554 5664310 000000 00 0001233444444432222222222 222333
Q ss_pred chhHHHhhHHHHHHhcCCCCchhhHHHHHHH-HHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCC
Q 010375 300 GINSILFYAPVLFQSMGFKGDASLYSSAMTG-AVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPN 378 (512)
Q Consensus 300 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (512)
.+.....+.|.+.++.|+++.+.+......+ +..+++.++++++.||+|+|+.+..+.++..+...++..........
T Consensus 224 ~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~- 302 (356)
T TIGR00901 224 GDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHD- 302 (356)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCccc-
Confidence 4456667778887779999999888777666 57789999999999999999988887777666555444321100000
Q ss_pred cccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHH
Q 010375 379 QELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNL 433 (512)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~ 433 (512)
+...+..+......++.+++.+.... ....+..|.+|+++||+.+|+.+...+
T Consensus 303 -~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 303 -GITFPHLLMLFLTITLEAVTGGLGTV-AFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred -ccccchHHHHHHHHHHHHHHhHHHHH-HHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 00001123333344444555454433 346888999999999999999887654
|
|
| >TIGR00805 oat sodium-independent organic anion transporter | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.4e-26 Score=229.61 Aligned_cols=384 Identities=11% Similarity=0.087 Sum_probs=254.2
Q ss_pred HHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhH
Q 010375 35 AIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRA 114 (512)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~ 114 (512)
++..+......+..+.+ ++.+.++| +++..+.|++.+.+.++++++.++.++++||+|||+
T Consensus 39 ~~~~~~~~~~~g~~~~~--l~~iek~F-----------------~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~ 99 (633)
T TIGR00805 39 TCAQLQGLLYNGLVNSS--LTTIERRF-----------------KLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPI 99 (633)
T ss_pred HHHHHHHHHHHHHHHhh--chhhhhhh-----------------CCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcce
Confidence 34555555555665555 45555555 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhc---------------------------------------------------hHHHHHHHH
Q 010375 115 SIICGGISFLLGAALNAAAA---------------------------------------------------NLAMLLTGR 143 (512)
Q Consensus 115 ~l~~~~~~~~~~~~~~~~~~---------------------------------------------------~~~~l~~~r 143 (512)
++.++.++++++++++++.+ .+..++++|
T Consensus 100 ~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 179 (633)
T TIGR00805 100 VIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQ 179 (633)
T ss_pred EEEecHHHHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHH
Confidence 99999999999999998763 245678899
Q ss_pred HHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccC-C-------------------Cch
Q 010375 144 ILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLE-T-------------------WGW 203 (512)
Q Consensus 144 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~-~-------------------~~W 203 (512)
+++|+|.+..++...+++.|++|+++|+++++++..+..+|.++|++++....... + ..|
T Consensus 180 ~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaW 259 (633)
T TIGR00805 180 LLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAW 259 (633)
T ss_pred HHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHH
Confidence 99999999999999999999999999999999999999999999999854332110 0 027
Q ss_pred hHHHHhhHHHHHHHHHHhhccCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccch
Q 010375 204 RLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNR 283 (512)
Q Consensus 204 r~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (512)
|..|++.+++.++..+.++++|++.+....+.+.++.++. ......+ ....+ .....++.....+.+++++.
T Consensus 260 wl~Fli~g~l~~l~~v~l~~~p~~lp~~~~~~~~~~~~~~--~~~~~~~--~~~~~---~~~~~~~~~~~~~~Ll~n~~- 331 (633)
T TIGR00805 260 WIGFLICGGVALLTSIPFFFFPKALPKEGKRVNVDVHETE--KLEKSED--KSRKK---NSDITKDFPKIIKRLLCNPI- 331 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHhCccccCCcccccchhhhhhh--ccccccc--ccchh---hhhhHHHHHHHHHHHHcCcH-
Confidence 7788888888877766666666543110000000000000 0000000 00000 00000011123344555544
Q ss_pred hHHHHHHHHHHHHHhhchhHHHhhHHHHHHh-cCCCCchhhHHHHHHHH-HHHHHHHHHHHHHhhcCC--hhHHHHhhHH
Q 010375 284 PQLVMAIFMPMFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGA-VLASSTLISIATVDKLGR--RALLISGGIQ 359 (512)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~~~--r~~~~~~~~~ 359 (512)
++...+..+.....+..+..|+|.++++ +|+++.+++++.....+ +.+++.+++|+++||++. |+.+..+.+.
T Consensus 332 ---f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~ 408 (633)
T TIGR00805 332 ---YMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICL 408 (633)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHH
Confidence 4555555555566677888899999876 99999999988887766 568899999999999984 5666666665
Q ss_pred HHHHHHHHHHHHhh-------------------------cc------CCC------------------------cccc--
Q 010375 360 MITCQVIVSIILGL-------------------------KF------GPN------------------------QELS-- 382 (512)
Q Consensus 360 ~~~~~~~~~~~~~~-------------------------~~------~~~------------------------~~~~-- 382 (512)
..++.+........ .. ... ....
T Consensus 409 ~~~~~~~~~~~~~~~C~~~~~agv~~~y~~~~~~~~~~~~Cn~~C~C~~~~~~PVCg~~~~tY~SpC~AGC~~~~~~~~~ 488 (633)
T TIGR00805 409 STLSYLLCSPLFLIGCESAPVAGVNNPSTDQSIYVENPTDCNRQCSCDSSFFDPVCGDNGLAYLSPCHAGCSMSVGTGSN 488 (633)
T ss_pred HHHHHHHHHHHHeecCCCCccceeeccCCCcccCCCChhccCCCCCCCCCCcccccCCCCCEEECccccCCCCccCCCCc
Confidence 55554432211000 00 000 0000
Q ss_pred ------------------------c--chhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHH-HH
Q 010375 383 ------------------------K--SFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNL-FF 435 (512)
Q Consensus 383 ------------------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~-~g 435 (512)
. .....+++..++..+.......|.. ..+-+.+|+++|..+.|+...+.+ +|
T Consensus 489 ~~y~~CsCi~~~~~~~a~~g~C~~~C~~~~~~f~~~~~~~~~~~~~~~~p~~-~i~lR~V~~~~rs~alg~~~~~~rllg 567 (633)
T TIGR00805 489 MVYTNCSCVQTPGNSSAKKGLCNPPCATSLLYFLILFIPLSFIAFITAVPLY-MVLLRVVNPEEKSLAIGLQWLCMRVFA 567 (633)
T ss_pred ceecccccccCCCCCCCcCCCCCcccchhHHHHHHHHHHHHHHHHhccCchh-eEEeeccCcccchHHhhHHHHHHHHhc
Confidence 0 0011222333333333344455654 444588999999999999998876 57
Q ss_pred HHHHHHHHHHHHhh
Q 010375 436 TFVIAQIFLTLLCS 449 (512)
Q Consensus 436 ~~~~~~~~~~~~~~ 449 (512)
.+.+|.++|.+.|.
T Consensus 568 ~iP~pi~fG~~iD~ 581 (633)
T TIGR00805 568 TIPAPILFGLLIDV 581 (633)
T ss_pred CCChhHHHhhhhhc
Confidence 78999999999985
|
Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange. |
| >KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.2e-27 Score=209.41 Aligned_cols=379 Identities=14% Similarity=0.043 Sum_probs=264.4
Q ss_pred HHHHHHhhhhhhhccccccccccHHHHHHhhh-------hhh--------------------------hhhcccccCCcc
Q 010375 32 FVAAIGGSIFGYDIGISGGVTSMDAFLKKFFH-------DVY--------------------------LKKKHAHENNYC 78 (512)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~--------------------------~~~~~~~~~~~~ 78 (512)
.++..+.+.++...+++.+. +|.+..+.-. ... +....+.+.++.
T Consensus 24 viv~ialllDnmL~~vivPi--iP~~L~d~~~~p~~~~~~~~is~~~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~~ 101 (464)
T KOG3764|consen 24 VIVSIALLLDNMLYTVIVPI--IPGYLYDIQAEPTIIQPFFPISTAPIPPGSMSSFSSLNISTESTNASAGKSPAEAISL 101 (464)
T ss_pred EEEehhhhccCccceeeecc--CccHHHHhccCCccCccccccccCCCCCccccceecccCCccccccccccCchhccCc
Confidence 34466777888888888777 6777766641 000 001112334667
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhh
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVP 158 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 158 (512)
+-+++++|++.+++.+.+.+.+++.|.+.||+|+|-.+++|+.++..++++.++.++++.++++|.+||+|.+...+...
T Consensus 102 ~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsgl 181 (464)
T KOG3764|consen 102 DRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGL 181 (464)
T ss_pred cccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCC-CchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhccCCChhHHHHcCCH
Q 010375 159 LYLSEMAPTH-LRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKK 237 (512)
Q Consensus 159 ~~i~~~~~~~-~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~ 237 (512)
++++|.+|++ +|++++|+.-.+.++|.++||+. ++...+..|.+.+|++.++++++-..+.+++-|..+
T Consensus 182 amlAd~f~~d~er~~vmGialgfislG~lvgPpf--GGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~-------- 251 (464)
T KOG3764|consen 182 AMLADVFPEDNERGSVMGIALGFISLGVLVGPPF--GGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTE-------- 251 (464)
T ss_pred HHHHHHcccchhhhHHHHHHHHHHhccceecCCc--ccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccc--------
Confidence 9999999875 68999999999999999999999 778888889999999999999998888777433210
Q ss_pred HHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHH-HHHhcC
Q 010375 238 VEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPV-LFQSMG 316 (512)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g 316 (512)
..+.+..+..+++++++++... .......+++. .....--.++. ..+++.
T Consensus 252 -------------------------~~~~~~~~~~~~~~Ll~dP~I~---~~agai~~~n~-~lafLePtlslwm~e~m~ 302 (464)
T KOG3764|consen 252 -------------------------MDPDSTEQGTPMWSLLMDPYIL---LIAGAITFSNS-SLAFLEPTLSLWMLETMF 302 (464)
T ss_pred -------------------------cCccccccCccHHHHHhCchHh---hhhcchhhccc-hHHHhCcccHHHHHHhcc
Confidence 0000122345667777666521 21222222221 11111112223 344566
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHH--hhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHH
Q 010375 317 FKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLIS--GGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVIC 394 (512)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (512)
-+..+.|..+....+...++..+.|.+.||++..+.+.. +.+...++.....+... ....+.....++
T Consensus 303 ~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~----------~~~L~vp~~~l~ 372 (464)
T KOG3764|consen 303 TPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATS----------IAQLWVPNFGLG 372 (464)
T ss_pred CCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhh----------HHHHhhhhHHHH
Confidence 555588999999999999999999999999994333332 32222222222222211 111233333334
Q ss_pred HHHHHhhhcccceeeeeecccCChh---hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHH
Q 010375 395 LFVLAFGWSWGPLGWTVPSEIFPLE---TRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWV 462 (512)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~ 462 (512)
+.+........|.. .++.|.-..+ ..|...++......+|.+++|.+.|.+.+..|+.......++.
T Consensus 373 ~~i~~~dasl~P~l-~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~ 442 (464)
T KOG3764|consen 373 FGIGLADASLIPTL-GYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGIL 442 (464)
T ss_pred HHHHHHHHHHhhhh-HHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHH
Confidence 44433333444442 2333433333 6688999999999999999999999999999865444443333
|
|
| >PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-25 Score=245.61 Aligned_cols=326 Identities=12% Similarity=0.004 Sum_probs=223.3
Q ss_pred CcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHH---hhchHHHHHHHHHHHhhhhhhccchh
Q 010375 81 DNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNA---AAANLAMLLTGRILLGVGIGFGNQAV 157 (512)
Q Consensus 81 s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~~~~~~~l~~~r~l~G~~~~~~~~~~ 157 (512)
+....+++.+++.+++.++++++|+++||+|||++++.+.++.++..++.. .+++++.++++|+++|++.+...+..
T Consensus 45 ~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 124 (1146)
T PRK08633 45 QVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAK 124 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHH
Confidence 345679999999999999999999999999999999998877666555443 45789999999999999999999999
Q ss_pred hhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccC-------CCchhHHHHhhHHH-HHHHHHHhhccCCChh
Q 010375 158 PLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLE-------TWGWRLSLGLAAAP-ALMMTVGGILLPETPN 229 (512)
Q Consensus 158 ~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~-------~~~Wr~~f~~~~~~-~~~~~~~~~~~~e~p~ 229 (512)
.+++.|++|+++|++++++...+.++|.++|++++....... ..+|++.+.+..+. .++.+++.+++||+|+
T Consensus 125 ~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (1146)
T PRK08633 125 YGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPA 204 (1146)
T ss_pred HhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCC
Confidence 999999999999999999999999999999999954332210 12344444443333 3334444555788764
Q ss_pred HHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHH
Q 010375 230 SLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAP 309 (512)
Q Consensus 230 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (512)
+...+.+.++ . ... +.....++.+++++..+.. .+..+...........+.|
T Consensus 205 ~~~~~~~~~~----------~----~~~----------~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 256 (1146)
T PRK08633 205 AAPEVFDKKK----------Y----LFP----------KLLWRNLKLLRSDRVLWLA----IIGLSYFWFISQLAQANFP 256 (1146)
T ss_pred CCcccccccc----------c----ccH----------HHHHHHHHHHhcCcHHHHH----HHHHHHHHHHHHHHHHhhH
Confidence 2111000000 0 000 0001123344444432222 2222222222334455566
Q ss_pred HHHHh-cCCCCc-hhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhh
Q 010375 310 VLFQS-MGFKGD-ASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSI 387 (512)
Q Consensus 310 ~~~~~-~g~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (512)
.++.+ +|++.. ..+++....+++.+++.++.+++.||+++++.+.++.++.+++.+++.... ..+
T Consensus 257 ~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~ 323 (1146)
T PRK08633 257 AYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAP-------------SLA 323 (1146)
T ss_pred HHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhh-------------hHH
Confidence 66554 899888 889999999999999999999999999988888777666666555544321 123
Q ss_pred HHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010375 388 LVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLC 448 (512)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~ 448 (512)
..++..++.+++.+....+. .+++.+..|++.|++++|+.+++..++.++++.+.+.+..
T Consensus 324 ~~~~~~~~~g~~~~~~~~~~-~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~ 383 (1146)
T PRK08633 324 SVLVLFFLFGFSAGLFIVPL-NALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSG 383 (1146)
T ss_pred HHHHHHHHHHHHHHHhhHHH-HHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444455555555443333 5777899999999999999999999998887777665543
|
|
| >COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-24 Score=191.20 Aligned_cols=329 Identities=15% Similarity=0.103 Sum_probs=250.3
Q ss_pred CCccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhcc
Q 010375 75 NNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGN 154 (512)
Q Consensus 75 ~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 154 (512)
++|+|+|.+..|++++...+...+.+++..+++.|+|.++.+..++++..++.++-... +.+.++.+-.+.|.|.+...
T Consensus 39 r~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~~~L~~gt~l~G~gIav~n 117 (395)
T COG2807 39 RQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GLPLLFLGTLLAGAGIAVIN 117 (395)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHhhHHHHH
Confidence 44459999999999999999999999999999999999999999999999999998887 77888999999999999999
Q ss_pred chhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCC-CchhHHHHhhHHHHHHHHHHhhccCCChhHHHH
Q 010375 155 QAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLET-WGWRLSLGLAAAPALMMTVGGILLPETPNSLIE 233 (512)
Q Consensus 155 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~-~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~ 233 (512)
+..+.++-+.||+ +-+.++++|....++|..+++.+ ...+.++ .+||....+.+.++++.++.++.-...++
T Consensus 118 VLLPslIK~~Fpk-~~~~mtglYs~sl~~~aaLaa~l--avpla~~~~gW~~aL~~WAl~allAl~~WlPq~~r~~---- 190 (395)
T COG2807 118 VLLPSLIKRDFPK-RVGLMTGLYSTSLGAGAALAAAL--AVPLAQHSGGWRGALGFWALLALLALLIWLPQALREQ---- 190 (395)
T ss_pred HhhhHHHHhhccc-chhhHHhHHHHHHHHHHHHHhhh--hhHHHHhhccHHHHHHHHHHHHHHHHHHHhhhccccc----
Confidence 9999999999975 56999999999999999999988 4444444 47999999999999988887764321110
Q ss_pred cCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHH
Q 010375 234 RGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQ 313 (512)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (512)
....+....+...+++++. .+...+++..+...++....|+|.++.
T Consensus 191 ------------------------------~~~~~~~~~~~~~vw~~~~----aW~vtLfmGlqS~~~Y~~~~WLP~ili 236 (395)
T COG2807 191 ------------------------------AASIATKLVSVRKVWRSPL----AWQVTLFMGLQSLLYYIVIGWLPAILI 236 (395)
T ss_pred ------------------------------ccccccccccccccccCch----hHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 0011111223344555554 445555566666677889999999999
Q ss_pred hcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhc-CChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHH
Q 010375 314 SMGFKGDASLYSSAMTGAVLASSTLISIATVDKL-GRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVV 392 (512)
Q Consensus 314 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (512)
+.|+|..++|.+.+...+..++.++....+.+|. ++|+.......++.++.+.+.+.. .+..+..
T Consensus 237 ~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P-----------~~~~~lw--- 302 (395)
T COG2807 237 DRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAP-----------GQLPILW--- 302 (395)
T ss_pred HcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhh-----------hhHHHHH---
Confidence 9999999999999999999999999999999976 456666666666666666665431 1212222
Q ss_pred HHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-hhhHHHHH
Q 010375 393 ICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK-FGIFLFFA 459 (512)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g-~~~~~~~~ 459 (512)
..+.+.+.+..+.-....+..+.-.++..+.-.|+.+.++++-...+|.++|.+.|..| |...+...
T Consensus 303 ~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l 370 (395)
T COG2807 303 ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLL 370 (395)
T ss_pred HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHH
Confidence 34444444433322222233344456777888999999999999999999999999987 44443333
|
|
| >TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-25 Score=221.43 Aligned_cols=331 Identities=15% Similarity=0.133 Sum_probs=223.2
Q ss_pred CCccccCcchhHHHHHHHHHHHHHHHHhhhhhhhh----hchh-HHHHHHHHHHHHHHHHHHhhch------HHHHHHHH
Q 010375 75 NNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRD----YGRR-ASIICGGISFLLGAALNAAAAN------LAMLLTGR 143 (512)
Q Consensus 75 ~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr----~Grr-~~l~~~~~~~~~~~~~~~~~~~------~~~l~~~r 143 (512)
.+++|+++.++|++.++..+..++..|+.|+++|| +||| +.++.+....+++.+++.+.++ ...+++.+
T Consensus 27 ~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 106 (437)
T TIGR00792 27 TDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITY 106 (437)
T ss_pred HHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHH
Confidence 34459999999999999999999999999999997 6874 4677888888888888877654 45677788
Q ss_pred HHHhhhhhhccchhhhhhhhcC-CCCCchhHHHHHHHHHHHHHHHHHHHHHhhc--c---cCCCchhHHHHhhHHHHHHH
Q 010375 144 ILLGVGIGFGNQAVPLYLSEMA-PTHLRGGLNMMFQLATTLGIFTANMINYGTQ--K---LETWGWRLSLGLAAAPALMM 217 (512)
Q Consensus 144 ~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~--~---~~~~~Wr~~f~~~~~~~~~~ 217 (512)
++.+++.+...+...++..|.. ++++|++..++...+..+|..+++.+..... . .+..+||+.+.+.++++++.
T Consensus 107 ~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~ 186 (437)
T TIGR00792 107 ILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVS 186 (437)
T ss_pred HHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHH
Confidence 9999988888878888888987 4688999999998888888776655422111 1 13468999999998888777
Q ss_pred HHHh-hccCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHH
Q 010375 218 TVGG-ILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQ 296 (512)
Q Consensus 218 ~~~~-~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (512)
.++. ++.||+++. .+.++ +++.+.+..++.+++++..+ ...+..+.
T Consensus 187 ~~~~~~~~~e~~~~----~~~~~-------------------------~~~~~~~~~~~~l~~~~~~~----~~~~~~~~ 233 (437)
T TIGR00792 187 LIICFFGTKERYSE----IPKNI-------------------------EKKLSLKQIFKALFKNDQLL----ILCLAYLF 233 (437)
T ss_pred HHHHHcCCEecCCC----CCccc-------------------------ccCCCHHHHHHHHhCCHHHH----HHHHHHHH
Confidence 6554 446765410 00000 00000111233444444322 22222222
Q ss_pred HhhchhHHHhhHHHHHHh-cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhcc
Q 010375 297 ILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKF 375 (512)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (512)
..........+.+++.+. .+ ++...+.......++.+++.++.++++||+|+|+.+..+..+..++.+.+.+..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~---- 308 (437)
T TIGR00792 234 YNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAG---- 308 (437)
T ss_pred HHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcc----
Confidence 222333333444555443 33 455566677777899999999999999999999998888776666655443321
Q ss_pred CCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCC-------hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010375 376 GPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFP-------LETRSAGQSITVAVNLFFTFVIAQIFLTLLC 448 (512)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~ 448 (512)
...+.......+.+.+.+.. .+..+++.+|..+ ++.+|.+.|+.+....+|..+++.+.|.+.+
T Consensus 309 --------~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~ 379 (437)
T TIGR00792 309 --------SNLPLILVLIILAGFGQNFV-TGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILG 379 (437)
T ss_pred --------hhHHHHHHHHHHHHHHHHHH-HHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11223333444444444433 2344566667654 5568999999999999999999999999998
Q ss_pred hcch
Q 010375 449 SFKF 452 (512)
Q Consensus 449 ~~g~ 452 (512)
..|+
T Consensus 380 ~~G~ 383 (437)
T TIGR00792 380 IIGY 383 (437)
T ss_pred HcCC
Confidence 7664
|
GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners. |
| >TIGR00882 2A0105 oligosaccharide:H+ symporter | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.3e-25 Score=213.02 Aligned_cols=340 Identities=11% Similarity=0.079 Sum_probs=219.5
Q ss_pred cccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHH---Hhhc-----hHHHHHHHHHHHhhh
Q 010375 78 CKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALN---AAAA-----NLAMLLTGRILLGVG 149 (512)
Q Consensus 78 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~~-----~~~~l~~~r~l~G~~ 149 (512)
+|++..+.|++.+.+.++..++++++|+++||+|||+.++.+....+++.... .+.+ .+..+++.|++.|++
T Consensus 33 ~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 112 (396)
T TIGR00882 33 NGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFV 112 (396)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 48899999999999999999999999999999999999988776665544322 1222 233456678899998
Q ss_pred hhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhc-cCCCh
Q 010375 150 IGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGIL-LPETP 228 (512)
Q Consensus 150 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~-~~e~p 228 (512)
.+...+....+..|.. +++++..+......++|.++++.+ ++... ..+||++|++.++++++..++.++ .||+|
T Consensus 113 ~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~--~g~l~-~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 187 (396)
T TIGR00882 113 FSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASI--AGILF-SIDPQIVFWLGSGFALILMLLLMFAKPKAP 187 (396)
T ss_pred hccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHH--Hhhhh-ccCchHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 8888888887777753 334566777878889999999998 44333 348999999988888776655555 44443
Q ss_pred hHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhH
Q 010375 229 NSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYA 308 (512)
Q Consensus 229 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (512)
+. ++.++.. +.+.++++..+.+++++++..+.. .+..+.....+.....+.
T Consensus 188 ~~----~~~~~~~---------------------~~~~~~~~~~~~~~~l~~~~~~~~----~l~~~~~~~~~~~~~~~~ 238 (396)
T TIGR00882 188 SS----ATVANAL---------------------GANASAFSLKLALELFRQRKFWMF----VLYVVGVACVYDVFDQQF 238 (396)
T ss_pred hh----hhhhccc---------------------ccccCCCCHHHHHHHHcCCcHHHH----HHHHHHHHHHHHHHHHHH
Confidence 21 0000000 000001111234455555543222 222222222333344445
Q ss_pred HHHHHhc----CCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccc
Q 010375 309 PVLFQSM----GFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKS 384 (512)
Q Consensus 309 ~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (512)
+.+.+++ +.+....+.......+...++.+..+++.||+++|+.+.++..+..+...+.... .
T Consensus 239 ~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~-------------~ 305 (396)
T TIGR00882 239 ANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFA-------------T 305 (396)
T ss_pred HHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhc-------------C
Confidence 5555542 4455566778888888889999999999999999999888777666655443321 1
Q ss_pred hhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHH-HHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHH
Q 010375 385 FSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSI-TVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVT 463 (512)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~-~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 463 (512)
+.+..+...++.+.+..... .....+..+..|++.++++.+. .+....+|+.+++.+.|.+.|..|+...+.+.+++.
T Consensus 306 ~~~~~~~~~~l~g~~~~~~~-~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~ 384 (396)
T TIGR00882 306 TALEVVILKMLHAFEVPFLL-VGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIV 384 (396)
T ss_pred ChHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHH
Confidence 12333333334443332221 1223455666788888877766 567889999999999999999988766665555444
Q ss_pred HH
Q 010375 464 IM 465 (512)
Q Consensus 464 ~~ 465 (512)
++
T Consensus 385 ~i 386 (396)
T TIGR00882 385 LL 386 (396)
T ss_pred HH
Confidence 33
|
|
| >COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-24 Score=195.83 Aligned_cols=348 Identities=14% Similarity=0.163 Sum_probs=260.6
Q ss_pred hhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHH
Q 010375 38 GSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASII 117 (512)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~ 117 (512)
.++.|+......+. +|.+++.| +++..+.+++...++.++.+.+++.|++.+|+|+|+.++
T Consensus 22 Ffl~G~~~~l~diL--ip~l~~~f-----------------~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~ 82 (422)
T COG0738 22 FFLWGFITCLNDIL--IPHLKEVF-----------------DLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIV 82 (422)
T ss_pred HHHHHHHhhcchhh--HHHHHHHh-----------------CccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHH
Confidence 34555666555555 56666666 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH---hhchHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHh
Q 010375 118 CGGISFLLGAALNA---AAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYG 194 (512)
Q Consensus 118 ~~~~~~~~~~~~~~---~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~ 194 (512)
+|+.++++++.+.. -..+|..++++-++.|.|.+...+.++.+++...++++..+.+++.+...++|.+++|+++..
T Consensus 83 lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~ 162 (422)
T COG0738 83 LGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSS 162 (422)
T ss_pred HHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 99999999999984 567899999999999999999999999999999999888999999999999999999999644
Q ss_pred hccc-----------------CCCchhHHHHhhHHHHHHHHHHhhc--cCCChhHHHHcCCHHHHHHHHHHHcCCchhhH
Q 010375 195 TQKL-----------------ETWGWRLSLGLAAAPALMMTVGGIL--LPETPNSLIERGKKVEGRRVLEKIRGTKEVNA 255 (512)
Q Consensus 195 ~~~~-----------------~~~~Wr~~f~~~~~~~~~~~~~~~~--~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~ 255 (512)
.... ....||++|...+...++..+.... .|+.+.-
T Consensus 163 lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~------------------------- 217 (422)
T COG0738 163 LILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVA------------------------- 217 (422)
T ss_pred HHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcc-------------------------
Confidence 4331 0134888888887777766665544 4544310
Q ss_pred HHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHh-cCCCCchhhHHHHHHHHHHH
Q 010375 256 EYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLA 334 (512)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~ 334 (512)
+.+..+..+....++++++. +....+..+++.........|++.++.+ .|.+..++....+....+.+
T Consensus 218 -------~~~~~~~~~~~~~~l~~~~~----~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~ 286 (422)
T COG0738 218 -------APSLGASGSAGLSSLFQNKH----LRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFM 286 (422)
T ss_pred -------cccccccccchHHHHHhChH----HHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHH
Confidence 00001111113455666655 3444555555555667778888888887 88899999999999999999
Q ss_pred HHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecc
Q 010375 335 SSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSE 414 (512)
Q Consensus 335 ~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (512)
+|++++.++..|+...+.+....++..+.++...+.. ....+....+.+.+.+..+..+ ++...+
T Consensus 287 vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~--------------g~v~~~~l~~ig~F~simfPTI-fslal~ 351 (422)
T COG0738 287 VGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIG--------------GVVALYALFLIGLFNSIMFPTI-FSLALK 351 (422)
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhc--------------ChHHHHHHHHHHHHhHHHHHHH-HHHHHh
Confidence 9999999999999998888877665555554444432 2344555556666666555444 677777
Q ss_pred cCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHH
Q 010375 415 IFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLF 457 (512)
Q Consensus 415 ~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~ 457 (512)
..| ++-. ..|.......+|+++.|++.|++.|+.+......
T Consensus 352 ~l~-~~ts-~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~ 392 (422)
T COG0738 352 NLG-EHTS-VGSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFL 392 (422)
T ss_pred ccC-cccc-ccceeeeeheecchHHHHHHHHHHHhhhhHHHHH
Confidence 777 3333 3344455567889999999999999988655444
|
|
| >PTZ00207 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.8e-24 Score=206.80 Aligned_cols=377 Identities=14% Similarity=0.101 Sum_probs=238.3
Q ss_pred ccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhh------chHHHHHHHHHHHhhhh
Q 010375 77 YCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAA------ANLAMLLTGRILLGVGI 150 (512)
Q Consensus 77 ~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~------~~~~~l~~~r~l~G~~~ 150 (512)
++|+|..+++++.+.. .....++++.|+++||+|||+++.++.+++.++.++++++ ++++.+.+.|++.|+|.
T Consensus 56 ~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~ 134 (591)
T PTZ00207 56 RYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGC 134 (591)
T ss_pred HhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHH
Confidence 3499999999998874 4456778889999999999999999999999999999997 68999999999999999
Q ss_pred hhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhh-c--cCCC
Q 010375 151 GFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGI-L--LPET 227 (512)
Q Consensus 151 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~-~--~~e~ 227 (512)
+...+.+...+.+|+| ++||++.++...+.++|.++.+.+..... . .+|+..|++.+++.++..++.+ + .|+.
T Consensus 135 ~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~--~-~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~ 210 (591)
T PTZ00207 135 MLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFF--S-DNTSAYFFFLMSFALVVGILAIVFMRLPPF 210 (591)
T ss_pred HHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH--H-HhHHHHHHHHHHHHHHHHHHHHhheeCCcc
Confidence 9999999999999996 78999999999999999986555422222 1 3688888888887776655443 3 3555
Q ss_pred hhHHHHcCCHHHHHHHHHHHcCC--------------------------------------chh----------------
Q 010375 228 PNSLIERGKKVEGRRVLEKIRGT--------------------------------------KEV---------------- 253 (512)
Q Consensus 228 p~~l~~~~~~~~~~~~~~~~~~~--------------------------------------~~~---------------- 253 (512)
|++..++++.++.++..++.++. ...
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~ 290 (591)
T PTZ00207 211 HLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTVIVLTVIF 290 (591)
T ss_pred hhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 55543332222222221111000 000
Q ss_pred -----------------hHHHHHHH--H-HH--Hhhc--------c-c----CcccHHHhcccchhHHHHHHHHHHHHHh
Q 010375 254 -----------------NAEYQDMV--D-AS--ELAN--------S-I----KHPFRNILERRNRPQLVMAIFMPMFQIL 298 (512)
Q Consensus 254 -----------------~~~~~~~~--~-~~--~~~~--------~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (512)
+.+.++.+ + .. ..++ + . ..++.+.++ +.-+|++++.+++..
T Consensus 291 p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~----~~d~Wll~~~~~cg~ 366 (591)
T PTZ00207 291 PFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLK----TARLWCLLWSIFCCV 366 (591)
T ss_pred HHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHh----chhHHHHHHHHHHhh
Confidence 00000000 0 00 0000 0 0 012222222 222566677777776
Q ss_pred hchhHHHhhHHHHHHhc-CCCCch--hhHHHHHHHHHHHHHHHHHHHHHhhcCCh--------hHHHHhhHHHHHHHHHH
Q 010375 299 TGINSILFYAPVLFQSM-GFKGDA--SLYSSAMTGAVLASSTLISIATVDKLGRR--------ALLISGGIQMITCQVIV 367 (512)
Q Consensus 299 ~~~~~~~~~~~~~~~~~-g~~~~~--~~~~~~~~~~~~~~~~~~~g~l~d~~~~r--------~~~~~~~~~~~~~~~~~ 367 (512)
.........+.++.+.+ |.+.+. ...+.++.++++.+|++..|.+.....+| ...+....++.++.+++
T Consensus 367 g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~~~~~~lll 446 (591)
T PTZ00207 367 GAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSVCIITMLTL 446 (591)
T ss_pred CchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHH
Confidence 66666777777888887 763333 23377888999999999999887322222 11211111233333333
Q ss_pred HHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHH-HHHHHHH
Q 010375 368 SIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVI-AQIFLTL 446 (512)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~ 446 (512)
.+.. + .....+..++.++++|..+... ...++|+|. ++-|+-.-+.....-+|+.+. -.++|.+
T Consensus 447 ~~~~------------p-~~~L~~~~~lvg~~~G~~~~~~-~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~ 511 (591)
T PTZ00207 447 FLTL------------P-KAALPLPYFIAAFANGFMAATI-ALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEW 511 (591)
T ss_pred HHHC------------C-ccHhHHHHHHHHHHhhHhHHHH-HHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHH
Confidence 3321 1 1345556666777777655444 577799999 888888888777777887766 5677888
Q ss_pred Hhhcc--------------hhhHHHHHHHHHHHHHHHhhccccCC
Q 010375 447 LCSFK--------------FGIFLFFAGWVTIMTIFVYFFLPETK 477 (512)
Q Consensus 447 ~~~~g--------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (512)
+|+.. ...+++.++++.+..+....+.-+++
T Consensus 512 Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~R~r 556 (591)
T PTZ00207 512 YTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVHLQYR 556 (591)
T ss_pred HHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhheeeehH
Confidence 87532 23455556666665555544443443
|
|
| >TIGR00806 rfc RFC reduced folate carrier | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-24 Score=201.73 Aligned_cols=348 Identities=12% Similarity=0.057 Sum_probs=225.7
Q ss_pred CccccCcch-hHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhcc
Q 010375 76 NYCKYDNQG-LAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGN 154 (512)
Q Consensus 76 ~~~~~s~~~-~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 154 (512)
+|+|+|..+ .|.+.++++.+++++.++.|+++||+|.|+++.++.+.+++.+++.++++++..+.+.|++.|++.|...
T Consensus 54 ~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGvaEA~~~ 133 (511)
T TIGR00806 54 TVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSVTMAARI 133 (511)
T ss_pred HHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhh---HHHHHHHHHHhhccCCChhHH
Q 010375 155 QAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLA---AAPALMMTVGGILLPETPNSL 231 (512)
Q Consensus 155 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~---~~~~~~~~~~~~~~~e~p~~l 231 (512)
+...++..|+|+++|+++.++..++..+|.+++++++.. ...+|||+-+.+. .....+++++.+++|..++.+
T Consensus 134 -A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql---l~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~sl 209 (511)
T TIGR00806 134 -AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL---LVTLGWISYSTLNIISLVFMTFSVFLALFLKRPKRSL 209 (511)
T ss_pred -HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhcCchhHHHHHHHHHHHHHHHHHHHHhCCCCchhh
Confidence 999999999999999999999999999999999999543 3456898866543 333345566667888766654
Q ss_pred HHcCCHHHHHHHHHHHcCCchhhH-HHHH-HH-HHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhH
Q 010375 232 IERGKKVEGRRVLEKIRGTKEVNA-EYQD-MV-DASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYA 308 (512)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (512)
.-+++.+.......+.....+.+. +..+ .+ .....-+.....+++..+++. ++...+-.....++++.+..|.
T Consensus 210 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~----vl~WSlWwa~a~~g~~qv~~Y~ 285 (511)
T TIGR00806 210 FFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQ----LLLWSLWWVFNSAGYYLITYYV 285 (511)
T ss_pred hhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcc----hhhhhHHHHHHhhHHHHHHHHH
Confidence 433321110000000000000000 0000 00 000000001112222233332 2222233333444667777777
Q ss_pred HHHHHhcCCC-CchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhh
Q 010375 309 PVLFQSMGFK-GDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSI 387 (512)
Q Consensus 309 ~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (512)
..+.++..-+ ..-.|..-++..+.+.+..+..|++-.++.+...+.++.+...-+.+++.... .++.|
T Consensus 286 Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~-----------t~~Iw 354 (511)
T TIGR00806 286 HTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQ-----------SHDIW 354 (511)
T ss_pred HHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhc-----------ccchH
Confidence 7776664322 22456777788888888899999986655443333333332222222222211 24466
Q ss_pred HHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHH
Q 010375 388 LVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIF 443 (512)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~ 443 (512)
...+..+++...+.+..... ...++.....+.-|...|++++...+-..+-..+.
T Consensus 355 ~~Y~~yvlf~~~y~flitia-~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~iV 409 (511)
T TIGR00806 355 VLYVTYVLFRGIYQFLVPIA-TFQIASSLSKELCALVFGINTFVATALKTIITAVV 409 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHhcccceEEEEecHHHHHHHHHHheEEEE
Confidence 77777777777777554333 34445555666678889998888877766655444
|
Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined. |
| >TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-23 Score=205.92 Aligned_cols=373 Identities=11% Similarity=0.054 Sum_probs=234.3
Q ss_pred cccCcchhHHHHHHHHHHHHHHHHhhhhhhhh-hchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccch
Q 010375 78 CKYDNQGLAAFTSSLYLAGLVASFVASPVTRD-YGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQA 156 (512)
Q Consensus 78 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 156 (512)
+|++..+.+++.+.+.++..++++++|+++|| +|||+++.++.++.+++.++.+++++++.++++|++.|++.|...+.
T Consensus 43 lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~ 122 (475)
T TIGR00924 43 LGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKAN 122 (475)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCC
Confidence 58899999999999999999999999999999 89999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhcCCCCC---chhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhccC----CChh
Q 010375 157 VPLYLSEMAPTHL---RGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLP----ETPN 229 (512)
Q Consensus 157 ~~~~i~~~~~~~~---r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~----e~p~ 229 (512)
..++++|++|+++ |+++.+++..+.++|.++||++ .....+..+||+.|.+.++..++..+...+.+ +.|+
T Consensus 123 ~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l--~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~ 200 (475)
T TIGR00924 123 PSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLL--AGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGS 200 (475)
T ss_pred HHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHH--HHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccccCCC
Confidence 9999999998764 8889999999999999999999 55556667999999998765555444433322 2221
Q ss_pred HHHHcCCHHHHHHHHH---------------HHcCCchhhHHHHH------HHHHHHhhcccCcccHHHhcccchhHHHH
Q 010375 230 SLIERGKKVEGRRVLE---------------KIRGTKEVNAEYQD------MVDASELANSIKHPFRNILERRNRPQLVM 288 (512)
Q Consensus 230 ~l~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (512)
.. ++.+.++...... ....+......... .........++ ...+..+++ .. .++
T Consensus 201 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~-~~l 275 (475)
T TIGR00924 201 VP-DPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLAFKP--RLDAVARNK-MY-AYI 275 (475)
T ss_pred CC-CCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhc--cCCHHHHhH-HH-HHH
Confidence 00 0000111000000 00000000000000 00000000000 011111111 11 122
Q ss_pred HHHHHHHHHhhchhHHHhhHHHHHHh-cCCCC----chhhHHHHHHHHHHHHHHHHHHHHHhhcCC-----hhHH--HHh
Q 010375 289 AIFMPMFQILTGINSILFYAPVLFQS-MGFKG----DASLYSSAMTGAVLASSTLISIATVDKLGR-----RALL--ISG 356 (512)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~----~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~-----r~~~--~~~ 356 (512)
.+++........+.......+.+.++ .+.+. ...+++.++..+..++..++..++..|.+| +... .++
T Consensus 276 ~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G 355 (475)
T TIGR00924 276 VLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLG 355 (475)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHH
Confidence 23333333333444444445555443 33321 125677778888888777765543333332 3333 567
Q ss_pred hHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHH
Q 010375 357 GIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFT 436 (512)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~ 436 (512)
.++..+++..+.+..... . .....+.++.+....+...+-. ...|....+..+..|++.||+.+|+......+|.
T Consensus 356 ~~l~~~~~~~~~~~~~~~-~---~~~~~s~~~~i~~~~~~~~ge~-~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~ 430 (475)
T TIGR00924 356 MLFCGASFLTFAASIWFA-D---AGGLTSPWFMVLIYLFQTLGEL-MISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGS 430 (475)
T ss_pred HHHHHHHHHHHHHHHhhc-C---CCCccCHHHHHHHHHHHHHHHH-HHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 777777766665432211 0 0011234455555555555544 4456667888999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcchhhHHHHHHHH
Q 010375 437 FVIAQIFLTLLCSFKFGIFLFFAGWV 462 (512)
Q Consensus 437 ~~~~~~~~~~~~~~g~~~~~~~~~~~ 462 (512)
.+++.+.....+..++...+...++.
T Consensus 431 ~l~~~~~~~~~~~~~~~~~~~~~~~~ 456 (475)
T TIGR00924 431 LLGGYLATFGAVPQGVTGVFGKIGLV 456 (475)
T ss_pred HHHHHHHHHHhcccchhhHHHHHHHH
Confidence 99998888776665554444443333
|
The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists. |
| >TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-23 Score=202.89 Aligned_cols=371 Identities=11% Similarity=-0.022 Sum_probs=237.4
Q ss_pred HHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHH--HHHHHHHHHHHHHhh-hhhhhh
Q 010375 33 VAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAF--TSSLYLAGLVASFVA-SPVTRD 109 (512)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~--~s~~~l~~~i~~~~~-g~l~dr 109 (512)
.+...++.+|...+...+. +|.+.++. |.|.+++|.+ .+.+.+...+.++++ ++..||
T Consensus 5 ~~~~ly~~~g~~~~~~~p~--lp~~l~~~-----------------g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~ 65 (390)
T TIGR02718 5 TLGLLYLSQGIPIGLAMDA--LPTLLRED-----------------GAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWR 65 (390)
T ss_pred HHHHHHHHHHhHHHHHHHH--HHHHHHHc-----------------CCCHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 3455567778777776665 56666655 8899999997 466788888888888 447999
Q ss_pred hchhHHHHHHHHHH-HHHHHHHH-h--hch-HHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHH
Q 010375 110 YGRRASIICGGISF-LLGAALNA-A--AAN-LAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLG 184 (512)
Q Consensus 110 ~Grr~~l~~~~~~~-~~~~~~~~-~--~~~-~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG 184 (512)
+||||..++...+. .+.....+ + ..+ ..+++..-++.++..+...+...++..|..++++++...+....+..+|
T Consensus 66 ~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG 145 (390)
T TIGR02718 66 LGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIG 145 (390)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHH
Confidence 99999875555332 22222222 1 222 3344555566667777788888888889998888898888898888999
Q ss_pred HHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhccCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHH
Q 010375 185 IFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDAS 264 (512)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (512)
.++++.. .....+..|||..|++.++..++..+..++++|+++. +++.+
T Consensus 146 ~~~g~~~--~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~~---~~~~~-------------------------- 194 (390)
T TIGR02718 146 FFGGGAG--TLVLFGKFGQRPAFLLVACVPLASLVCVLWLKDRAVA---SPEAP-------------------------- 194 (390)
T ss_pred HHHHHHH--HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCCCcC---ccccc--------------------------
Confidence 9999977 5555667799999999998887766666555443210 00000
Q ss_pred HhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHH-HHHHHHHHHHHH
Q 010375 265 ELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGA-VLASSTLISIAT 343 (512)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l 343 (512)
++...++++.+|++..+.......+ ..........+.+.+.++.|+++.+.+......+. ..+++.++.+++
T Consensus 195 ---~~~~~~~~~~l~~~~~~~~~~~~~l----~~~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l 267 (390)
T TIGR02718 195 ---LARRASLFRFFRRPLAWSLLALALL----SAMTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWL 267 (390)
T ss_pred ---hhhHHHHHHHHcCcCHHHHHHHHHH----HHHHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 0001124455555543332222222 22223334445667777789999999998887764 566778899999
Q ss_pred HhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCCh-hhhh
Q 010375 344 VDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPL-ETRS 422 (512)
Q Consensus 344 ~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~ 422 (512)
.||+++|+.+..+..+..+............ .............+.....+...... .....+..++ +.++
T Consensus 268 ~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~g 339 (390)
T TIGR02718 268 VRRAGLWRTFILGVGLAGSLALLWFAQAAFW-------LAPGIAVAWSCSAFGSLITGITSVAI-YTAFMRFAGDGDQAG 339 (390)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHcc-------cCCcHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhCcccchH
Confidence 9999999988876655433322222111000 00111111222222222333332223 2343455554 8899
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHH
Q 010375 423 AGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIF 468 (512)
Q Consensus 423 ~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 468 (512)
+.+++.+....+|..++|.+.|.+.|..|+...+....++.+.+.+
T Consensus 340 ~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 340 TDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998886666666555554443
|
RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes. |
| >PRK10207 dipeptide/tripeptide permease B; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.6e-24 Score=208.24 Aligned_cols=357 Identities=10% Similarity=0.025 Sum_probs=220.2
Q ss_pred ccccCcchhHHHHHHHHHHHHHHHHhhhhhhhh-hchhHHHHHHHHHHHHHHHHHHhhchHHH-HHHHHHHHhhhhhhcc
Q 010375 77 YCKYDNQGLAAFTSSLYLAGLVASFVASPVTRD-YGRRASIICGGISFLLGAALNAAAANLAM-LLTGRILLGVGIGFGN 154 (512)
Q Consensus 77 ~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~-l~~~r~l~G~~~~~~~ 154 (512)
++|++.++.+++.+.+.....+..+++|+++|| +||||+++.+.++++++.++++++++... ++++|+++|+|.|...
T Consensus 44 ~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~ 123 (489)
T PRK10207 44 QLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFK 123 (489)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhcccccc
Confidence 358899999999999998888889999999999 99999999999999999999999876554 5589999999999999
Q ss_pred chhhhhhhhcCCCC--CchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhccCCChhHHH
Q 010375 155 QAVPLYLSEMAPTH--LRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLI 232 (512)
Q Consensus 155 ~~~~~~i~~~~~~~--~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~ 232 (512)
+...+++.|.+|++ +|+++++++..+.++|.++||.+ +....++.|||+.|++.++..++..+...+.++..+...
T Consensus 124 ~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l--~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~~ 201 (489)
T PRK10207 124 ANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSL--APVIADKFGYSVTYNLCGAGLIIALLVYFACRGMVKDIG 201 (489)
T ss_pred CCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHH--HHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhhcccC
Confidence 99999999999877 45779999999999999999999 566667789999999865533333333333332211000
Q ss_pred --HcCCHHHHHHHH-------------HHHcCCchhhHHHHHHH----H---HHHhhcccCcccHHHhcccchhHHHHHH
Q 010375 233 --ERGKKVEGRRVL-------------EKIRGTKEVNAEYQDMV----D---ASELANSIKHPFRNILERRNRPQLVMAI 290 (512)
Q Consensus 233 --~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (512)
.+++..+..... ........ ........ . -...+. +.+ +.+|++... ....
T Consensus 202 ~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~f~~~~~--~~~--~~~r~r~~~--~~~l 274 (489)
T PRK10207 202 SEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVE-VANLVLIVLSIVVTIIFFREAF--KLD--KTGRNKMFV--AFVL 274 (489)
T ss_pred CCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHHHh--cCC--HHHHHHHHH--HHHH
Confidence 001111111100 00000000 00000000 0 000000 111 222222211 1111
Q ss_pred HHHHHHHhhchhHHHhhHHHHHHh-cCCCC----chhhHHHHHHHHHHHHHHHHHHHHHhhcCChh-------HHHHhhH
Q 010375 291 FMPMFQILTGINSILFYAPVLFQS-MGFKG----DASLYSSAMTGAVLASSTLISIATVDKLGRRA-------LLISGGI 358 (512)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~----~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~-------~~~~~~~ 358 (512)
++........+....+..+.+.++ .+.+. ...........+..++..++.+++.||+++|+ .+.++.+
T Consensus 275 ~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~ 354 (489)
T PRK10207 275 MLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMF 354 (489)
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHH
Confidence 111222222333343445555543 22111 12234445556667778888999999999886 3667777
Q ss_pred HHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHH
Q 010375 359 QMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFV 438 (512)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~ 438 (512)
+..++++.+..........+ ...+.++.+....+.+.+.... .+....++.+..|++.++.++|+.+....+|+.+
T Consensus 355 l~~~~~~~~~~~~~~~~~~~---~~~s~~~~i~~~~l~g~Ge~~~-~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~l 430 (489)
T PRK10207 355 LCSLGFLTAAAAGMWFADAQ---GLTSPWFIVLVYLFQSLGELFI-SALGLAMIAALVPQHLMGFILGMWFLTQAAAFLL 430 (489)
T ss_pred HHHHHHHHHHHHHHhhcCCC---CccCHHHHHHHHHHHHHHHHHH-hHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 76666554432211111110 1122344555555555555543 4444677778999999999999999999999999
Q ss_pred HHHHHHHH
Q 010375 439 IAQIFLTL 446 (512)
Q Consensus 439 ~~~~~~~~ 446 (512)
+..+....
T Consensus 431 g~~l~~~~ 438 (489)
T PRK10207 431 GGYVATFT 438 (489)
T ss_pred HHHHHHHh
Confidence 98877644
|
|
| >TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.8e-21 Score=183.97 Aligned_cols=376 Identities=10% Similarity=0.078 Sum_probs=239.7
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhh----hhchhHHHHH-HHHHHHHHHHHHHhhchHH----------------
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTR----DYGRRASIIC-GGISFLLGAALNAAAANLA---------------- 137 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~d----r~Grr~~l~~-~~~~~~~~~~~~~~~~~~~---------------- 137 (512)
|++..+.+++..+..+...+.+++.|+++| |+||||.+++ +.....++.++.+++++.+
T Consensus 35 g~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i 114 (477)
T TIGR01301 35 GIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAI 114 (477)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHH
Confidence 889999999999999999999999999999 5999998877 4666677777777776643
Q ss_pred -HHHHHHHHHhhhhhhccchhhhhhhhcCCCCCc--hhHHHHHHHHHHHHHHHHHHHHHhhcccC-------C------C
Q 010375 138 -MLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLR--GGLNMMFQLATTLGIFTANMINYGTQKLE-------T------W 201 (512)
Q Consensus 138 -~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~lG~~~~~~~~~~~~~~~-------~------~ 201 (512)
.++++-.+..++.....+...++++|.+|+++| +.+.++.+...++|.++|+.++......+ . .
T Consensus 115 ~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~ 194 (477)
T TIGR01301 115 IVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCA 194 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccc
Confidence 223333444557777888899999999998865 57999999999999999999854321111 0 2
Q ss_pred chhHHHHhhHHHHHHHHHHhhc-cCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcc
Q 010375 202 GWRLSLGLAAAPALMMTVGGIL-LPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILER 280 (512)
Q Consensus 202 ~Wr~~f~~~~~~~~~~~~~~~~-~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (512)
+.|+.|++.++..++..++..+ .+|.|....++.+.++. ++ .++.+.+..++++++.
T Consensus 195 ~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~~-------~~---------------~~~~~~~~~~~~i~~~ 252 (477)
T TIGR01301 195 NLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINSEA-------AP---------------PSKHGEEAFFGELFGA 252 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhhhc-------cc---------------ccccchhhhHHHHHHH
Confidence 6789999988888777666554 78876311000000000 00 0000011223344432
Q ss_pred -cchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHh--cCCCCch----------hhHHHHHHHHHHHHHHHHHHHHHhhc
Q 010375 281 -RNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS--MGFKGDA----------SLYSSAMTGAVLASSTLISIATVDKL 347 (512)
Q Consensus 281 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~----------~~~~~~~~~~~~~~~~~~~g~l~d~~ 347 (512)
+..++.....++..++.+.++..+..|.+.++.+ ++-++.. ..+......+...+.+++..++.+|+
T Consensus 253 ~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~ 332 (477)
T TIGR01301 253 FKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGW 332 (477)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2223334444555555555555666666555543 4433211 12334455556667777888899999
Q ss_pred CC-hhHHHHhhHHHHHHHHHHHHHHhhccC--C---C-cc-cccch-hhHHHHHHHHHHHHhhhcccceeeeeecccCCh
Q 010375 348 GR-RALLISGGIQMITCQVIVSIILGLKFG--P---N-QE-LSKSF-SILVVVVICLFVLAFGWSWGPLGWTVPSEIFPL 418 (512)
Q Consensus 348 ~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~-~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 418 (512)
|+ |+....+.++.++++....+......+ + . .. .+... .+..+..+...+..++ ....++++++++..|+
T Consensus 333 g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A-~~~siPfal~s~~~~~ 411 (477)
T TIGR01301 333 GAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLA-ITYSIPFALASIRSSN 411 (477)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHH-HHHHHhHHHHHHHccc
Confidence 85 677788877778777777655421100 0 0 00 00001 2445555556666665 3456778999999885
Q ss_pred --hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc--hhhHHHHHHHHHH-HHHHHhhccccCC
Q 010375 419 --ETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK--FGIFLFFAGWVTI-MTIFVYFFLPETK 477 (512)
Q Consensus 419 --~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~-~~~~~~~~~~~~~ 477 (512)
+..|..+|+.|.+..+...+.....|.+.+..| ....+.++++..+ .++...+.+|+.+
T Consensus 412 ~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~ 475 (477)
T TIGR01301 412 LGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPR 475 (477)
T ss_pred cCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 455999999999999999999988888666655 3444555555544 4455556667654
|
This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot. |
| >PF03825 Nuc_H_symport: Nucleoside H+ symporter | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.6e-21 Score=182.88 Aligned_cols=326 Identities=15% Similarity=0.088 Sum_probs=226.9
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhc-hhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchh
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYG-RRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAV 157 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~G-rr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 157 (512)
|+|..|+|.+.+...+...++++++|.++||++ +|+.+.+..++.++........++++.+++..++..+......|..
T Consensus 33 G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~~~~~l~~~~~~p~~pl~ 112 (400)
T PF03825_consen 33 GFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSFWWLFVIMLLFSFFFSPTMPLS 112 (400)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHccHHHHH
Confidence 889999999999999999999999999999986 5778888888888877777888999999888888888888888888
Q ss_pred hhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHH--hhcccCCCchhHHHHhhHHHHHHHHHHhhccCCChhHHHHcC
Q 010375 158 PLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINY--GTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERG 235 (512)
Q Consensus 158 ~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~--~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~ 235 (512)
.++..++.. ++++-.|-.....++|.+++..... .....+..+..+.+++.+..+++.....+.+|+.|+..
T Consensus 113 dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~l~lp~~~~~~---- 186 (400)
T PF03825_consen 113 DSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFALFLPKTPPKR---- 186 (400)
T ss_pred HHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHhCCCCcccc----
Confidence 888888875 3344455566666666666643210 11111112233456666666655555566678776200
Q ss_pred CHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHhc
Q 010375 236 KKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSM 315 (512)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (512)
+.++ +.++....+..+++|++.. ..+.+..+...........|.+.++++.
T Consensus 187 ~~~~-------------------------~~~~~~~~~~~~llk~~~~----~~Fll~~~l~~~~~~~~~~f~~~yl~~~ 237 (400)
T PF03825_consen 187 SAKE-------------------------SVKKLLGLDALKLLKNPRF----LVFLLAAFLIGISHAAYYTFFSIYLQEL 237 (400)
T ss_pred ccCC-------------------------CcccccchHHHHHhcCccH----HHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 0000 0000111122356666553 2233333333344566677788888887
Q ss_pred C-CCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHH--
Q 010375 316 G-FKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVV-- 392 (512)
Q Consensus 316 g-~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 392 (512)
| .+....+...++..+.+++.-...+++..|+|.|+++.++.+..++=..+..... ++.+.....
T Consensus 238 gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~------------~~~~~~~~~~~ 305 (400)
T PF03825_consen 238 GGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFS------------DPWPFIVALQL 305 (400)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhc------------CCcHHHHHHHH
Confidence 7 7777788888888899999999999999999999999999888887777766541 111222222
Q ss_pred --HHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHH-HHHHHHHHHHHHHHHHhhcch
Q 010375 393 --ICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAV-NLFFTFVIAQIFLTLLCSFKF 452 (512)
Q Consensus 393 --~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~-~~~g~~~~~~~~~~~~~~~g~ 452 (512)
..+-+..++..+... ..++.+..|++.|++++++.+.. ..+|..++..+.|++.|+.+.
T Consensus 306 l~q~lhG~tf~~~~~a~-~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~ 367 (400)
T PF03825_consen 306 LGQLLHGLTFGLFHAAS-VRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGA 367 (400)
T ss_pred HHHhhhhHHHHHHHHHH-HHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcc
Confidence 234566666444433 57888999999999999998876 568999999999999998763
|
|
| >PRK10429 melibiose:sodium symporter; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1e-21 Score=193.86 Aligned_cols=336 Identities=13% Similarity=0.073 Sum_probs=211.8
Q ss_pred CccccCcchhHHHHHHHHHHHHHHHHhhhhhhh----hhch-hHHHHHHHHHHHHHHHHHHhhch------HHHHHHHHH
Q 010375 76 NYCKYDNQGLAAFTSSLYLAGLVASFVASPVTR----DYGR-RASIICGGISFLLGAALNAAAAN------LAMLLTGRI 144 (512)
Q Consensus 76 ~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~d----r~Gr-r~~l~~~~~~~~~~~~~~~~~~~------~~~l~~~r~ 144 (512)
+.+|++..++|.+..+..+.-++..|++|.++| |+|| |+.++.+....+++.+++-..++ +..+++.-+
T Consensus 35 ~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~ 114 (473)
T PRK10429 35 DVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYI 114 (473)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHH
Confidence 345899999999999999999999999999999 6799 56677788887777666644332 345666677
Q ss_pred HHhhhhhhccchhhhhhhhcC-CCCCchhHHHHHHHHHHHHHHHHHHHHHh-----hcccCCCchhHHHHhhHHHHHHHH
Q 010375 145 LLGVGIGFGNQAVPLYLSEMA-PTHLRGGLNMMFQLATTLGIFTANMINYG-----TQKLETWGWRLSLGLAAAPALMMT 218 (512)
Q Consensus 145 l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~lG~~~~~~~~~~-----~~~~~~~~Wr~~f~~~~~~~~~~~ 218 (512)
+.+++.....+...++..|.. +++||.+..++...+.++|..+.+.+... +...+..+|+....+.+++.++..
T Consensus 115 l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~ 194 (473)
T PRK10429 115 LWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVST 194 (473)
T ss_pred HHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHH
Confidence 778888888888899999998 57899999998777777775555443211 111122468887777777766655
Q ss_pred HHhhc-cCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhccc-chhHHHHHHHHHHHH
Q 010375 219 VGGIL-LPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERR-NRPQLVMAIFMPMFQ 296 (512)
Q Consensus 219 ~~~~~-~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 296 (512)
+..++ .+|.+.. .+. +.+++++.++++.++.. +.++ +...+...+.
T Consensus 195 ~~~~~~~~e~~~~----~~~---------------------------~~~~~~~~~~~~~~~~~~~n~~-~~~ll~~~~~ 242 (473)
T PRK10429 195 IITLRNVHEVYSS----DNQ---------------------------VSAEGSHLTLKDIVALIYKNDQ-LSCLLGMALA 242 (473)
T ss_pred HHHHcCceecCCc----ccc---------------------------ccccccCCCHHHHHHHHhcCHH-HHHHHHHHHH
Confidence 54444 6665310 000 00001122333333211 1122 2222222222
Q ss_pred HhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccC
Q 010375 297 ILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFG 376 (512)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (512)
..........+.+++.+....+....+.......+..+++.++.+++.||+|+|+.+..+..+..++.+.+......
T Consensus 243 ~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~--- 319 (473)
T PRK10429 243 YNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLA--- 319 (473)
T ss_pred HHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhcc---
Confidence 22333444445555555433344555666666678889999999999999999999887776655554443322100
Q ss_pred CCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCC-------hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 010375 377 PNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFP-------LETRSAGQSITVAVNLFFTFVIAQIFLTLLCS 449 (512)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~ 449 (512)
.....+..++...+.+.+.+... +..+++.+|..+ .+..|...|.......++..+++.+.|.+.+.
T Consensus 320 -----~~~~~~~~~i~~~l~g~~~~~~~-~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~ 393 (473)
T PRK10429 320 -----APHNALLIVIAGILLNIGTALFW-VLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGL 393 (473)
T ss_pred -----CchhHHHHHHHHHHHHHHHHHHH-HHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11222333333344444444333 344567778754 34456688999999999999999999999886
Q ss_pred cch
Q 010375 450 FKF 452 (512)
Q Consensus 450 ~g~ 452 (512)
.|+
T Consensus 394 ~Gy 396 (473)
T PRK10429 394 IGY 396 (473)
T ss_pred cCC
Confidence 654
|
|
| >PRK09584 tppB putative tripeptide transporter permease; Reviewed | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.9e-21 Score=187.71 Aligned_cols=353 Identities=11% Similarity=0.063 Sum_probs=205.7
Q ss_pred ccccCcchhHHHHHHHHHHHHHHHHhhhhhhhh-hchhHHHHHHHHHHHHHHHHHHhhc-hHHHHHHHHHHHhhhhhhcc
Q 010375 77 YCKYDNQGLAAFTSSLYLAGLVASFVASPVTRD-YGRRASIICGGISFLLGAALNAAAA-NLAMLLTGRILLGVGIGFGN 154 (512)
Q Consensus 77 ~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~~~ 154 (512)
++|++..+.+++.+.+........+++|+++|| +|||+++..+.++.+++..++++++ +.+.++++|+++|++.|...
T Consensus 51 ~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~ 130 (500)
T PRK09584 51 QLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFK 130 (500)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhccc
Confidence 348899999999888877767777899999999 5999999999999999999998874 56677788999999999999
Q ss_pred chhhhhhhhcCCCCC--chhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhh----ccCCCh
Q 010375 155 QAVPLYLSEMAPTHL--RGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGI----LLPETP 228 (512)
Q Consensus 155 ~~~~~~i~~~~~~~~--r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~----~~~e~p 228 (512)
+...+++.|++|+++ |..+++++..+.++|..++|.+ .+...+..|||+.|.+.++..++..+... .++|.+
T Consensus 131 ~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i--~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~ 208 (500)
T PRK09584 131 ANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLA--TPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYG 208 (500)
T ss_pred CCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHH--HHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCC
Confidence 998999999998653 4567889999999999999999 55666777999999998765444333222 233321
Q ss_pred hHHHHcCCHHHHHHHH-----------HH-HcCCchhhHHHHHH---HHHHHhhcccCcccHHHhcccchhHHHHHHHHH
Q 010375 229 NSLIERGKKVEGRRVL-----------EK-IRGTKEVNAEYQDM---VDASELANSIKHPFRNILERRNRPQLVMAIFMP 293 (512)
Q Consensus 229 ~~l~~~~~~~~~~~~~-----------~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (512)
+. .++++.+...... .. .....+........ .......+. .... +...+++.+..+.+.
T Consensus 209 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~ 282 (500)
T PRK09584 209 SK-PDFEPINYRKLLLTIVGVVALIAIATWLLHNQEIARMALGVVALGIVVIFGKE-AFAM----KGAARRKMIVAFILM 282 (500)
T ss_pred CC-CCccccchhhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH-Hhhc----CHHHHHHHHHHHHHH
Confidence 10 0000011000000 00 00000000000000 000000000 0000 001111222211111
Q ss_pred HHHHhhchhHHHhhHHHHHHh---cCCC------CchhhHHHHHHHHHHHHHHHHHH----HHHhhcCChhHHHHhhHHH
Q 010375 294 MFQILTGINSILFYAPVLFQS---MGFK------GDASLYSSAMTGAVLASSTLISI----ATVDKLGRRALLISGGIQM 360 (512)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~---~g~~------~~~~~~~~~~~~~~~~~~~~~~g----~l~d~~~~r~~~~~~~~~~ 360 (512)
. ....++......+..+.. .+.+ ....+...+...+..++..++.. ++.+|.+..+.+.++.++.
T Consensus 283 -~-~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~ 360 (500)
T PRK09584 283 -L-EAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLC 360 (500)
T ss_pred -H-HHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHH
Confidence 1 111122222222322221 1111 12245566667766666666664 4444555557777888888
Q ss_pred HHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHH
Q 010375 361 ITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIA 440 (512)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~ 440 (512)
++++..+........ . ...-+.++.+....+.+.+-. ...|....++.+..|++.||+++|+......+|..++.
T Consensus 361 ~l~f~~l~~~~~~~~-~---~~~vs~~~~~~~~~l~~~ge~-~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g 435 (500)
T PRK09584 361 SGAFLVLPLGAKFAN-D---AGIVSVNWLIASYGLQSIGEL-MISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAG 435 (500)
T ss_pred HHHHHHHHHHHHhcC-C---CCccCHHHHHHHHHHHHHHHH-HHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888877665432110 0 011123344444444444433 44566678888999999999999988877777777766
Q ss_pred HHHH
Q 010375 441 QIFL 444 (512)
Q Consensus 441 ~~~~ 444 (512)
.+.+
T Consensus 436 ~~~~ 439 (500)
T PRK09584 436 YVAN 439 (500)
T ss_pred HHHH
Confidence 6664
|
|
| >KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.9e-23 Score=176.05 Aligned_cols=386 Identities=13% Similarity=0.097 Sum_probs=239.3
Q ss_pred hHHHHHHHHHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHHhhh
Q 010375 25 PSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVAS 104 (512)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g 104 (512)
.++..++..+|+..|-.+++...-+ ..+.+| +.|.+++.++..++.+.|.....+-++++|
T Consensus 40 ~hr~m~lv~mc~lgfgsyfcyd~p~------alq~~f-------------k~d~ni~~akftLlYsvYSwPNvVlcffgG 100 (459)
T KOG4686|consen 40 GHRFMALVFMCLLGFGSYFCYDAPG------ALQIDF-------------KLDSNIEYAKFTLLYSVYSWPNVVLCFFGG 100 (459)
T ss_pred hhHHHHHHHHHHhcccceeecCCch------hhhhhh-------------hcccccceeeeeeeeeeccCCCEEEeeecc
Confidence 3455666666666665555543321 234455 667789999999999999999999999999
Q ss_pred hhhhh-hchhHHHHHHHHHHHHHHHHHHh---hchHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHH
Q 010375 105 PVTRD-YGRRASIICGGISFLLGAALNAA---AANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLA 180 (512)
Q Consensus 105 ~l~dr-~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~ 180 (512)
++.|| +|.|..-++-+.+..++.++.+. .+.+|+++.+|++.|+|.-..-++-..+..-|+..||.+.++|+....
T Consensus 101 flidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSv 180 (459)
T KOG4686|consen 101 FLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSV 180 (459)
T ss_pred eeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHH
Confidence 99996 78887666666666677776654 589999999999999998888888899999999999999999999998
Q ss_pred HHHHHHHHHHHH-----HhhcccCCCchhHH---HHhhHHHHHHHHHHhhccCCChhHHHHcCC-HHHHHHHHHHHcCCc
Q 010375 181 TTLGIFTANMIN-----YGTQKLETWGWRLS---LGLAAAPALMMTVGGILLPETPNSLIERGK-KVEGRRVLEKIRGTK 251 (512)
Q Consensus 181 ~~lG~~~~~~~~-----~~~~~~~~~~Wr~~---f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~-~~~~~~~~~~~~~~~ 251 (512)
.-+|..+--.+. .........+-... ..+....+....+... ..+- ++.+++.+++
T Consensus 181 AR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~slical----------~lg~~D~rAerilh~----- 245 (459)
T KOG4686|consen 181 ARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCKQSLICAL----------SLGLSDDRAERILHL----- 245 (459)
T ss_pred HHhhceeeeeecHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHH----------HhhhhhhHHHHHHhh-----
Confidence 888875443321 00111111110000 0000011111111100 0000 0111111110
Q ss_pred hhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHh-cCCCCchhhHHHHHHH
Q 010375 252 EVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTG 330 (512)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~ 330 (512)
++....+.....+. ....+-++...+..++......-+....|.++++ +|+|+..++...+...
T Consensus 246 ------------e~g~~Ge~pkLtdv---~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy 310 (459)
T KOG4686|consen 246 ------------EEGFLGEEPKLTDV---NTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVY 310 (459)
T ss_pred ------------hcCcccCCcccccc---cccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhh
Confidence 00000001111111 1111223444444444444445566667777765 9999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeee
Q 010375 331 AVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWT 410 (512)
Q Consensus 331 ~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (512)
....+.+++.|.++||+|++-..+.+..+..+..=....+. .+.....+++.+..+.....+ .|.
T Consensus 311 ~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft--------------~lsPy~~m~~lGLsysllAcs-lWP 375 (459)
T KOG4686|consen 311 GISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFT--------------FLSPYTSMTFLGLSYSLLACS-LWP 375 (459)
T ss_pred hhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhh--------------hccHHHHHHHHhhhHHHHHHH-Hhh
Confidence 99999999999999999999777665544333322222211 112334444555554433222 266
Q ss_pred eecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-h---hhHHHHHHHHHHHHHHHhhccc
Q 010375 411 VPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK-F---GIFLFFAGWVTIMTIFVYFFLP 474 (512)
Q Consensus 411 ~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g-~---~~~~~~~~~~~~~~~~~~~~~~ 474 (512)
.++.+.|+++.|++.|.++.+.++|-++.|.+.|.+.|+.| + ..+++..+...+......+.+.
T Consensus 376 ~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~N 443 (459)
T KOG4686|consen 376 CVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYLN 443 (459)
T ss_pred hhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhhee
Confidence 77788999999999999999999999999999999999876 3 2333333333444444444443
|
|
| >PRK09669 putative symporter YagG; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=5e-21 Score=187.84 Aligned_cols=330 Identities=11% Similarity=0.030 Sum_probs=208.3
Q ss_pred CCccccCcchhHHHHHHHHHHHHHHHHhhhhhhhh----hchh-HHHHHHHHHHHHHHHHHHhhch------HHHHHHHH
Q 010375 75 NNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRD----YGRR-ASIICGGISFLLGAALNAAAAN------LAMLLTGR 143 (512)
Q Consensus 75 ~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr----~Grr-~~l~~~~~~~~~~~~~~~~~~~------~~~l~~~r 143 (512)
.+++|++..++|.+.++..+..++..|+.|.++|| +||| +.++.+....+++.++....++ ++.+++..
T Consensus 37 t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~ 116 (444)
T PRK09669 37 TDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTY 116 (444)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHH
Confidence 34469999999999999999999999999999998 7885 5566677777777766555543 45666667
Q ss_pred HHHhhhhhhccchhhhhhhhcC-CCCCchhHHHHHHHHHHHHHHHHHHHHHh--hcc---cCCCchhHHHHhhHHHHHHH
Q 010375 144 ILLGVGIGFGNQAVPLYLSEMA-PTHLRGGLNMMFQLATTLGIFTANMINYG--TQK---LETWGWRLSLGLAAAPALMM 217 (512)
Q Consensus 144 ~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~lG~~~~~~~~~~--~~~---~~~~~Wr~~f~~~~~~~~~~ 217 (512)
++.+.+.......-.++.+|+. ++++|++..++...+..+|..+++.+... ... ....+|+..+.+.++++++.
T Consensus 117 ~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~ 196 (444)
T PRK09669 117 ILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVL 196 (444)
T ss_pred HHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHH
Confidence 7777777777777788999988 45789998888888888887777654211 111 12357998888888877766
Q ss_pred HHHhhc-cCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHH
Q 010375 218 TVGGIL-LPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQ 296 (512)
Q Consensus 218 ~~~~~~-~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (512)
.+..++ .+|.++. .+ +++.+.+...+.+++++..+.......+..
T Consensus 197 ~~~~~~~~~e~~~~----~~----------------------------~~~~~~~~~~~~~~~n~~~~~l~~~~~~~~-- 242 (444)
T PRK09669 197 FFCCFFMTKERYTP----EV----------------------------DNSSSVWKDLKLLLGNSQWRIMFIFNVVLL-- 242 (444)
T ss_pred HHHHhCCeEEecCC----CC----------------------------cCCCCHHHHHHHHhCCchHHHHHHHHHHHH--
Confidence 555444 4553210 00 000011223444555555333322222211
Q ss_pred HhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccC
Q 010375 297 ILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFG 376 (512)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (512)
..........+++.+..-.++...+.......+..+++.++.+++.||+|+|+.+..+.++..+....+...
T Consensus 243 --~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~------ 314 (444)
T PRK09669 243 --TAVVTRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFI------ 314 (444)
T ss_pred --HHHHHHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh------
Confidence 122222223333333321123333444555567778888899999999999999887765544433322221
Q ss_pred CCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCC-------hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 010375 377 PNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFP-------LETRSAGQSITVAVNLFFTFVIAQIFLTLLCS 449 (512)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~ 449 (512)
+.+..+...+..++.+.+.+. ..+..+++.+|..+ .+..|...|..+....+|..+++.+.|.+.+.
T Consensus 315 -----~~~~~~~~~~~~~i~g~~~~~-~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~ 388 (444)
T PRK09669 315 -----PPSNVWLIFALNILFNFIQNL-TTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAW 388 (444)
T ss_pred -----CcchHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 112233344444555555553 33555677778774 33456678899999999999999999999987
Q ss_pred cch
Q 010375 450 FKF 452 (512)
Q Consensus 450 ~g~ 452 (512)
.|+
T Consensus 389 ~Gy 391 (444)
T PRK09669 389 VDY 391 (444)
T ss_pred cCC
Confidence 765
|
|
| >TIGR00788 fbt folate/biopterin transporter | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.3e-21 Score=191.56 Aligned_cols=375 Identities=12% Similarity=0.027 Sum_probs=233.6
Q ss_pred ccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhc-----hhHHHHHHHHHHH-HHHHHHHhhchHH-HHHHHHHHHhhh
Q 010375 77 YCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYG-----RRASIICGGISFL-LGAALNAAAANLA-MLLTGRILLGVG 149 (512)
Q Consensus 77 ~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~G-----rr~~l~~~~~~~~-~~~~~~~~~~~~~-~l~~~r~l~G~~ 149 (512)
++|++.++++.+.+...+...+-.+ +|+++||++ ||+.++++.++.. ++....+..++.. ...+.+++.+++
T Consensus 55 ~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~ 133 (468)
T TIGR00788 55 DLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALA 133 (468)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHH
Confidence 3499999999999999999999766 999999998 7788888877763 4433344445544 444488999999
Q ss_pred hhhccchhhhhhhhcCCCCCchhHHHH---HHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhccCC
Q 010375 150 IGFGNQAVPLYLSEMAPTHLRGGLNMM---FQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPE 226 (512)
Q Consensus 150 ~~~~~~~~~~~i~~~~~~~~r~~~~~~---~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e 226 (512)
.+...++..++..|..+ +++....+. .....++|.++++.+ .+...+..+||..|++.+++.++..+...+++|
T Consensus 134 ~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l--~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~~~E 210 (468)
T TIGR00788 134 KALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLL--GGPLLDKTLTRILFLITAALLLLQLFVSNLSKE 210 (468)
T ss_pred HHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHH--HHHHHHhcCcchHHHHHHHHHHHHHHHHHhccc
Confidence 99999999999999998 554443333 333345899999988 555556679999999988888777666667888
Q ss_pred ChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHh
Q 010375 227 TPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILF 306 (512)
Q Consensus 227 ~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (512)
++.....+.+.++. . .. ..... ...+..++.....+..++++..++.....++.+. .... .....
T Consensus 211 ~~~~~~~~~~~~~~-~--------~~---~~~~~-~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~-~~~~-~~~~~ 275 (468)
T TIGR00788 211 RRAFVRPRIGTYLE-M--------NM---ALLTL-GVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYA-NLPG-ASGSV 275 (468)
T ss_pred ccccccccccccch-h--------hh---hhhhh-hHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHh-hcCC-CCcee
Confidence 63100000000000 0 00 00000 0000000000112222333332221121111011 1111 11111
Q ss_pred hHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchh
Q 010375 307 YAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFS 386 (512)
Q Consensus 307 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (512)
+. ...+..|+++...|......+++.+++..+.+++.+|++.|+.+.++.++..++......... ..+. ....+..
T Consensus 276 f~-~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~-~~~~--~~gi~~~ 351 (468)
T TIGR00788 276 FC-ATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVK-RWNL--AFGISDE 351 (468)
T ss_pred EE-EEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeee-cccc--ccCCCCe
Confidence 11 112358999999999999999999999999999999999999988887776665544321110 0000 0000112
Q ss_pred hHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-----hhhHHHHHHH
Q 010375 387 ILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK-----FGIFLFFAGW 461 (512)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g-----~~~~~~~~~~ 461 (512)
+.......+...+.+..+.+. ..++.+..|++.+++..++.+.+.++|..+++.+.+.+.+..| +...+....+
T Consensus 352 ~~~~~~~~l~~~~~g~~~~~~-~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i 430 (468)
T TIGR00788 352 VFVLGDSIIAEVLAQLKFMPF-LVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILG 430 (468)
T ss_pred eeeeehhHHHHHHHHHHHccH-HHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHH
Confidence 233444555666666666666 5777899999999999999999999999999999999999887 5555544444
Q ss_pred HHH---HHHHHhhcccc
Q 010375 462 VTI---MTIFVYFFLPE 475 (512)
Q Consensus 462 ~~~---~~~~~~~~~~~ 475 (512)
+.+ +.+.+..++|+
T Consensus 431 ~~~~~l~~l~~~~llP~ 447 (468)
T TIGR00788 431 HSLAPLLPLPLLHLLPR 447 (468)
T ss_pred HHHHHHHHHHHHHhCCC
Confidence 433 33333345565
|
The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity. |
| >KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.8e-20 Score=167.44 Aligned_cols=392 Identities=14% Similarity=0.119 Sum_probs=262.6
Q ss_pred CCCchHHHHHHHHHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHH
Q 010375 21 GKVTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVAS 100 (512)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~ 100 (512)
.+..+|||++++++++-++.+++....+++. ..+.+.|+ + +....-|+..+|.+.+....
T Consensus 37 ~rVy~rRW~vLl~~slL~~SN~~qWI~ya~i---~n~~~~~Y----------------g-s~~~~~wlsmIym~v~vp~g 96 (480)
T KOG2563|consen 37 HRVYPRRWVVLLAFSLLNFSNGMQWIQYAPI---NNYVNSFY----------------G-SSSAADWLSMIYMVVSVPFG 96 (480)
T ss_pred cccchhHhHHHHHHHHHHhcCcchheeehhH---HHHHHHHh----------------c-chHHHHHHHHHHHHHHHHHh
Confidence 4678899999999998888887777666544 23445553 5 67778899999999999999
Q ss_pred HhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhh------chHH--HHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchh
Q 010375 101 FVASPVTRDYGRRASIICGGISFLLGAALNAAA------ANLA--MLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGG 172 (512)
Q Consensus 101 ~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~------~~~~--~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 172 (512)
+++-|+.|++|-|..++++..+.++|..+-..+ +.++ ..+.+..+.+.+.-........+..-||+++||..
T Consensus 97 f~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~ 176 (480)
T KOG2563|consen 97 FAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAI 176 (480)
T ss_pred hHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhh
Confidence 999999999999999999999999999987665 3445 67788999999888887777788899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccc------CCCchhH--HHHhhHHHHHHHHHHhhc-c---CCChhHHHHcCCHHHH
Q 010375 173 LNMMFQLATTLGIFTANMINYGTQKL------ETWGWRL--SLGLAAAPALMMTVGGIL-L---PETPNSLIERGKKVEG 240 (512)
Q Consensus 173 ~~~~~~~~~~lG~~~~~~~~~~~~~~------~~~~Wr~--~f~~~~~~~~~~~~~~~~-~---~e~p~~l~~~~~~~~~ 240 (512)
+..+-..+..+|.+++.++ ...+. ++..|-. .|+...+++.+.+.+..+ . |++|....+
T Consensus 177 A~~~~v~~n~LGvavg~ll--ppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~------- 247 (480)
T KOG2563|consen 177 ATVLGVMGNPLGVAVGFLL--PPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQ------- 247 (480)
T ss_pred hhhHHHhcchHHHHHHhhc--cceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhH-------
Confidence 9999888888888888776 33222 2345654 344444444433333322 3 333321000
Q ss_pred HHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHhcCCCCc
Q 010375 241 RRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGD 320 (512)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 320 (512)
....+.+...+.++.++++. +....+.+......++...+.+...+...|++..
T Consensus 248 ----------------------~~~~~~~f~~si~~~~~n~~----F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~ 301 (480)
T KOG2563|consen 248 ----------------------AALQDASFPKSIKSCFKNRQ----FIILAICYGIGLGLFNSLSTLLNLALCPSGYEGV 301 (480)
T ss_pred ----------------------hhhhcCcHHHHHHHHHcCcc----HHHHHHHHhhhHHHHHHHHHHhhhccccccCCcc
Confidence 00001112334555666655 4444555555544555555555544445677778
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhcCChh-HHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHH
Q 010375 321 ASLYSSAMTGAVLASSTLISIATVDKLGRRA-LLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLA 399 (512)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (512)
.+|+......+.+++++.+.|.+.||.++.+ ...+......++...+..... .....+..... +.....
T Consensus 302 ~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~---------~~~~~viv~~t-~~~~g~ 371 (480)
T KOG2563|consen 302 FAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTL---------FLGDSVIVFTT-CGLLGF 371 (480)
T ss_pred ccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhc---------cCCceEehhhh-HHHHHH
Confidence 8999999999999999999999999997644 444444443333222211110 01112233333 333344
Q ss_pred hhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc----hhhHHHHHHHHHHHHHHHhhcccc
Q 010375 400 FGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK----FGIFLFFAGWVTIMTIFVYFFLPE 475 (512)
Q Consensus 400 ~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~ 475 (512)
++.+..|+..-+..|..-|..-++..|+.+..+++.+++-..+.+...+..+ +....+......+..+.+..+.++
T Consensus 372 ~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~ 451 (480)
T KOG2563|consen 372 FGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRP 451 (480)
T ss_pred hhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhh
Confidence 4556777877788888766777889999999999999999999998888776 554455555555555555555554
Q ss_pred CC
Q 010375 476 TK 477 (512)
Q Consensus 476 ~~ 477 (512)
..
T Consensus 452 ~y 453 (480)
T KOG2563|consen 452 DY 453 (480)
T ss_pred hH
Confidence 43
|
|
| >COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-19 Score=169.62 Aligned_cols=330 Identities=13% Similarity=0.132 Sum_probs=240.6
Q ss_pred CCccccCcchhHHHHHHHHHHHHHHHHhhhhhhhh----hchh-HHHHHHHHHHHHHHHHHHhhch------HHHHHHHH
Q 010375 75 NNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRD----YGRR-ASIICGGISFLLGAALNAAAAN------LAMLLTGR 143 (512)
Q Consensus 75 ~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr----~Grr-~~l~~~~~~~~~~~~~~~~~~~------~~~l~~~r 143 (512)
.+.+|+++..+|.+..+.-+--++..|+.|.++|| +||| +.++.+.+..++.+.++-.+++ ....++.-
T Consensus 40 Tdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY 119 (467)
T COG2211 40 TDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTY 119 (467)
T ss_pred hcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHH
Confidence 44569999999999999999999999999999995 8885 5667788889999888887774 45666778
Q ss_pred HHHhhhhhhccchhhhhhhhcCC-CCCchhHHHHHHHHHHHHHHHHHHH-----HHhhcccCCCchhHHHHhhHHHHHHH
Q 010375 144 ILLGVGIGFGNQAVPLYLSEMAP-THLRGGLNMMFQLATTLGIFTANMI-----NYGTQKLETWGWRLSLGLAAAPALMM 217 (512)
Q Consensus 144 ~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~lG~~~~~~~-----~~~~~~~~~~~Wr~~f~~~~~~~~~~ 217 (512)
.+.+++.......-.++..|..+ ++||.+..++-+.+.++|..+...+ ...+......||+..-.+.++++++.
T Consensus 120 ~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~ 199 (467)
T COG2211 120 MLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVIL 199 (467)
T ss_pred HHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHH
Confidence 89999999999999999999985 5799999999999999996655443 11111112468999888888888888
Q ss_pred HHHhhc-cCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccH----HHhcccchhHHHHHHHH
Q 010375 218 TVGGIL-LPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFR----NILERRNRPQLVMAIFM 292 (512)
Q Consensus 218 ~~~~~~-~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 292 (512)
.+.+++ .+|.+.. ....+...+.+++ .+++++.. ...++
T Consensus 200 ~l~~~~~v~ER~~~--------------------------------~~~~~~~~~~~~~~~~~~~~~Nrp~----~~~l~ 243 (467)
T COG2211 200 LLFCFFNVKERVVE--------------------------------TQPTKTGVKLKLKDSFLLIFKNRPL----LLLLL 243 (467)
T ss_pred HHHHHHHhhcccCc--------------------------------cccCcccccccHHHHHHHHHccchH----HHHHH
Confidence 777766 6776520 0000001123333 34445443 22233
Q ss_pred HHHHHhhchhHHHhhHHHHHHh-cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHH
Q 010375 293 PMFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIIL 371 (512)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~ 371 (512)
..++...+.+.......+|.+. .|.+.............+.+++.++..++.+|+|+|+++.++.++..++.+++.+..
T Consensus 244 ~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~ 323 (467)
T COG2211 244 MNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTP 323 (467)
T ss_pred HHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhc
Confidence 4444444555555566666554 666667777777777888888899999999999999999999888888887777652
Q ss_pred hhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCC-------hhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 010375 372 GLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFP-------LETRSAGQSITVAVNLFFTFVIAQIFL 444 (512)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~~~~~~~~ 444 (512)
.+..+..++..++.+.+.+ ...++++++++|... .+..|...|...++.-+|.+++..+.|
T Consensus 324 -----------~~~~~l~~~~~~i~~~g~~-~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g 391 (467)
T COG2211 324 -----------AGSVVLIVVALIIAGVGTG-IANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPG 391 (467)
T ss_pred -----------CcchHHHHHHHHHHHHHhh-ccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 2334445555555556655 446677899888863 345678899999999999999999999
Q ss_pred HHHhhcch
Q 010375 445 TLLCSFKF 452 (512)
Q Consensus 445 ~~~~~~g~ 452 (512)
+..+..|+
T Consensus 392 ~~L~~~Gy 399 (467)
T COG2211 392 WILGAIGY 399 (467)
T ss_pred HHHHHcCC
Confidence 99987764
|
|
| >PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.5e-19 Score=172.49 Aligned_cols=363 Identities=15% Similarity=0.095 Sum_probs=242.6
Q ss_pred chhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHH-HHHHHHHHHHHHHHHhh--chHHHHHHHHHHHhhhhhhccchhhh
Q 010375 83 QGLAAFTSSLYLAGLVASFVASPVTRDYGRRASI-ICGGISFLLGAALNAAA--ANLAMLLTGRILLGVGIGFGNQAVPL 159 (512)
Q Consensus 83 ~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l-~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~ 159 (512)
+..++..++..+..++..|+.|.++|+-|+||.+ ....++..+++.+..+. .+++...+.-++.-++.+...+...+
T Consensus 70 s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna 149 (477)
T PF11700_consen 70 SLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA 149 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456788889999999999999999999887655 44555566667766664 34555555566666778888888999
Q ss_pred hhhhcCCCCCc--------------------------hhHHHHHHHHHHHHHHHHHHHHHhhcccCC------CchhHHH
Q 010375 160 YLSEMAPTHLR--------------------------GGLNMMFQLATTLGIFTANMINYGTQKLET------WGWRLSL 207 (512)
Q Consensus 160 ~i~~~~~~~~r--------------------------~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~------~~Wr~~f 207 (512)
++.|..+++++ ++..+.-.....+|.++..++......... .+-|..+
T Consensus 150 ~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~ 229 (477)
T PF11700_consen 150 YLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAF 229 (477)
T ss_pred HhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHH
Confidence 99999999888 899888888888888887776443332221 2358888
Q ss_pred HhhHHHHHHH-HHHhhccCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHH
Q 010375 208 GLAAAPALMM-TVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQL 286 (512)
Q Consensus 208 ~~~~~~~~~~-~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (512)
.+.++.-++. ....+++||.|+....++...-... .-++....++++.+. +-
T Consensus 230 ~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~-----------------------g~~~l~~t~k~~~~~----~~ 282 (477)
T PF11700_consen 230 LIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRF-----------------------GFKRLWRTFKEIRKL----RQ 282 (477)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHH-----------------------HHHHHHHHHHHHHhC----hH
Confidence 8877776554 4445568887631000000000000 000011222222222 22
Q ss_pred HHHHHHHHHHHhhchhHHHhhHHHHHH-hcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCCh--hHHHHhhHHHHHH
Q 010375 287 VMAIFMPMFQILTGINSILFYAPVLFQ-SMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRR--ALLISGGIQMITC 363 (512)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r--~~~~~~~~~~~~~ 363 (512)
...+++..+...-+...+......+.+ .+|++..+.........+.+++|.++.+++.||+|.| +.+..+.+...+.
T Consensus 283 ~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i 362 (477)
T PF11700_consen 283 LFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIII 362 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHH
Confidence 444555556555666777777777766 4999999999999999999999999999999999998 6666555444222
Q ss_pred HHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHH
Q 010375 364 QVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIF 443 (512)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~ 443 (512)
.+...+-. ... .......+...+...+.+...+ +..+...++.+|+.|+++.+...|++...+...+.++|.++
T Consensus 363 ~~~g~~G~--~~~---~~g~~~~~~f~~~a~~~G~~~G-~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~ 436 (477)
T PF11700_consen 363 PLYGLFGF--WPS---FFGLKSPWEFWVLAVLIGLFMG-GIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLF 436 (477)
T ss_pred HHHHHHHh--hhc---ccCcccHHHHHHHHHHHHHHhh-hHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 22111100 000 0011234445555555666655 44556678889999999999999999999999999999999
Q ss_pred HHHHhhcc-hhhHHHHHHHHHHHHHHHhhccccCCC
Q 010375 444 LTLLCSFK-FGIFLFFAGWVTIMTIFVYFFLPETKG 478 (512)
Q Consensus 444 ~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (512)
|.+.+..+ ....+....+..+++++++..++..|+
T Consensus 437 g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~~~~g 472 (477)
T PF11700_consen 437 GLITDATGSQRYGFLFLLVLFLIGLILLFFVDVEKG 472 (477)
T ss_pred HHHHHHhCCchhHHHHHHHHHHHHHHHHhhccchhh
Confidence 99999887 445555566666666666666665443
|
Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins. |
| >PRK09848 glucuronide transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.5e-20 Score=179.50 Aligned_cols=327 Identities=10% Similarity=0.055 Sum_probs=195.7
Q ss_pred ccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhh----chhHHH-HHHHHHHHHHHHHH-Hh----hc--hHHHHHHHHH
Q 010375 77 YCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDY----GRRASI-ICGGISFLLGAALN-AA----AA--NLAMLLTGRI 144 (512)
Q Consensus 77 ~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~----Grr~~l-~~~~~~~~~~~~~~-~~----~~--~~~~l~~~r~ 144 (512)
.+|++..++|.+.+...+..++..+++|+++||. ||||.. ..+.+...+..++. .. ++ ....+++.-+
T Consensus 38 ~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (448)
T PRK09848 38 VAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAYLTYM 117 (448)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHHHHHHH
Confidence 3588999999999999999999999999999996 777644 55555444444443 21 11 2233455567
Q ss_pred HHhhhhhhccchhhhhhhhcCCC-CCchhHHHHHHHH-----HHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHH
Q 010375 145 LLGVGIGFGNQAVPLYLSEMAPT-HLRGGLNMMFQLA-----TTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMT 218 (512)
Q Consensus 145 l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~-----~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~ 218 (512)
+.+++.+...+...++..+..++ ++|.+..++-..+ ..+|..++|.+..........+|.....+.++++++..
T Consensus 118 ~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~v~~~~~~ 197 (448)
T PRK09848 118 GLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGMVLY 197 (448)
T ss_pred HHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHH
Confidence 77888888887777777777654 5788876666543 33555666666321110001122222222333333333
Q ss_pred HHh-hccCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHH
Q 010375 219 VGG-ILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQI 297 (512)
Q Consensus 219 ~~~-~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (512)
++. ...||+++. + .++...+..++.+++++.. ....+..++.
T Consensus 198 ~~~~~~~~e~~~~----~-----------------------------~~~~~~~~~~~~l~~n~~f----~~~~~~~~~~ 240 (448)
T PRK09848 198 FICFKSTRENVVR----I-----------------------------VAQPSLKISLQTLKRNRPL----FMLCIGALCV 240 (448)
T ss_pred HHHHcCcEeccCC----C-----------------------------ccCCCHHHHHHHHhCCchH----HHHHHHHHHH
Confidence 332 235655310 0 0000011224455555553 2233333333
Q ss_pred hhchhHHHhhHHHHHHh-cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccC
Q 010375 298 LTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFG 376 (512)
Q Consensus 298 ~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (512)
...+.......|++.++ +|.+....++......++.+++.++.+++.||+++|+.+..+.++..++.+.+.+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~------ 314 (448)
T PRK09848 241 LISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWV------ 314 (448)
T ss_pred HHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc------
Confidence 33344455556666665 67665555544444456778889999999999999999998887777666555431
Q ss_pred CCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChh-------hhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 010375 377 PNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLE-------TRSAGQSITVAVNLFFTFVIAQIFLTLLCS 449 (512)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-------~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~ 449 (512)
+....+.......+.+.+.+... +...++.+|..|.+ .+|...|+.+....+|..+++.+.+.+.+.
T Consensus 315 -----~~~~~~~~~~~~~l~g~G~~~~~-~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~ 388 (448)
T PRK09848 315 -----SVWSLPVALVALAIASIGQGVTM-TVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGL 388 (448)
T ss_pred -----CchhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11122333333444455544333 33456666776543 458899999999999999999999998876
Q ss_pred cch
Q 010375 450 FKF 452 (512)
Q Consensus 450 ~g~ 452 (512)
.|+
T Consensus 389 ~G~ 391 (448)
T PRK09848 389 SGY 391 (448)
T ss_pred cCC
Confidence 653
|
|
| >PRK11462 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.4e-19 Score=174.56 Aligned_cols=328 Identities=9% Similarity=0.009 Sum_probs=200.4
Q ss_pred CccccCcchhHHHHHHHHHHHHHHHHhhhhhhhh----hchhH-HHHHHHHHHHHHHHHHHhhch------HHHHHHHHH
Q 010375 76 NYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRD----YGRRA-SIICGGISFLLGAALNAAAAN------LAMLLTGRI 144 (512)
Q Consensus 76 ~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr----~Grr~-~l~~~~~~~~~~~~~~~~~~~------~~~l~~~r~ 144 (512)
+.+|+++..+|.+..+.-+--++..|+.|.++|| +|||| .++++....+++.+++-..++ +..+++.-+
T Consensus 38 ~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~ 117 (460)
T PRK11462 38 DIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYT 117 (460)
T ss_pred HhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHH
Confidence 3459999999999999999999999999999995 79865 555677777777776655543 345666777
Q ss_pred HHhhhhhhccchhhhhhhhcCC-CCCchhHHHHHHHHHHHHHHHHHHHHHhhcc-----cCCCchhHHHHhhHHHHHHHH
Q 010375 145 LLGVGIGFGNQAVPLYLSEMAP-THLRGGLNMMFQLATTLGIFTANMINYGTQK-----LETWGWRLSLGLAAAPALMMT 218 (512)
Q Consensus 145 l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~-----~~~~~Wr~~f~~~~~~~~~~~ 218 (512)
+..++.......-.++..|..+ ++||++..++...+..+|..+++.+...... .+..+|+....+.+++++++.
T Consensus 118 ~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~ 197 (460)
T PRK11462 118 LLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMML 197 (460)
T ss_pred HHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHH
Confidence 7788888888888899999987 6899999999999999988777665321111 112468887777777776665
Q ss_pred HHhhc-cCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHH
Q 010375 219 VGGIL-LPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQI 297 (512)
Q Consensus 219 ~~~~~-~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (512)
.+.++ .+|.++. + +++.+.+..++..++++..+.......+...
T Consensus 198 ~i~~~~~kE~~~~-----~----------------------------~~~~~~~~~l~~~~~Nk~~~~l~~~~~~~~~-- 242 (460)
T PRK11462 198 AFCFFTTKERVEA-----P----------------------------PTTTSMREDLRDIWQNDQWRIVGLLTIFNIL-- 242 (460)
T ss_pred HHHHhcceeccCC-----C----------------------------ccCCCHHHHHHHHhCChHHHHHHHHHHHHHH--
Confidence 55444 4554310 0 0000011123334444443322222112212
Q ss_pred hhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCC
Q 010375 298 LTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGP 377 (512)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (512)
..........++.+...-++...+.......+..+++.+++++++||+++|+....+..+..+...++.+.
T Consensus 243 --~~~~~~~~~~y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~------- 313 (460)
T PRK11462 243 --AVCVRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFV------- 313 (460)
T ss_pred --HHHHHHhHhhhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh-------
Confidence 21222222333333321223334456667778888999999999999999988765444333322222221
Q ss_pred CcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCC-------hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 010375 378 NQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFP-------LETRSAGQSITVAVNLFFTFVIAQIFLTLLCSF 450 (512)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~ 450 (512)
+...........++.+.+.+ ...++.+++.+|..+ .+..|...+.......+|..+++.+.|.+.+..
T Consensus 314 ----~~~~~~~~~~~~~l~g~~~~-~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~ 388 (460)
T PRK11462 314 ----PMQASITMFVFIFVIGVLHQ-LVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYG 388 (460)
T ss_pred ----chhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 11112222223333333332 233444556666654 333455567777889999999999999988765
Q ss_pred ch
Q 010375 451 KF 452 (512)
Q Consensus 451 g~ 452 (512)
|+
T Consensus 389 Gy 390 (460)
T PRK11462 389 GY 390 (460)
T ss_pred CC
Confidence 53
|
|
| >PF13347 MFS_2: MFS/sugar transport protein | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.2e-19 Score=177.22 Aligned_cols=328 Identities=14% Similarity=0.143 Sum_probs=236.1
Q ss_pred cccCcchhHHHHHHHHHHHHHHHHhhhhhhh----hhchhHH-HHHHHHHHHHHHHHHHhh-c-------hHHHHHHHHH
Q 010375 78 CKYDNQGLAAFTSSLYLAGLVASFVASPVTR----DYGRRAS-IICGGISFLLGAALNAAA-A-------NLAMLLTGRI 144 (512)
Q Consensus 78 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~d----r~Grr~~-l~~~~~~~~~~~~~~~~~-~-------~~~~l~~~r~ 144 (512)
+++++...|.+..+..+..++..|+.|.++| |+||||. ++++....+++.+++... + ....+.+.-+
T Consensus 32 ~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~~~ 111 (428)
T PF13347_consen 32 LGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVFYI 111 (428)
T ss_pred cCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHHHH
Confidence 4889999999999999999999999999999 8998754 556888888888877766 4 2344577777
Q ss_pred HHhhhhhhccchhhhhhhhcCC-CCCchhHHHHHHHHHHHHHHHHHHHHHhhc--ccC--C-CchhHHHHhhHHHHHHHH
Q 010375 145 LLGVGIGFGNQAVPLYLSEMAP-THLRGGLNMMFQLATTLGIFTANMINYGTQ--KLE--T-WGWRLSLGLAAAPALMMT 218 (512)
Q Consensus 145 l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~--~~~--~-~~Wr~~f~~~~~~~~~~~ 218 (512)
+..++.......-.++..|..+ +++|.+..+.-..+..+|.++...+..... ..+ . .+|++..++.+++.++..
T Consensus 112 l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~ 191 (428)
T PF13347_consen 112 LFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFF 191 (428)
T ss_pred HHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHh
Confidence 7899999999999999999997 468999999999988888875555521111 111 1 279999999888888777
Q ss_pred HHhhc-cCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHH
Q 010375 219 VGGIL-LPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQI 297 (512)
Q Consensus 219 ~~~~~-~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (512)
++.++ .+|.++ + .++.+++.+.+..++.+++++..+.. .+..+..
T Consensus 192 ~i~~~~~ke~~~------~------------------------~~~~~~~~~~~~~~~~~~~nr~~~~l----~~~~~~~ 237 (428)
T PF13347_consen 192 LITFFFVKERSV------E------------------------VTEQEKKISLRDSLRSLFRNRPFRIL----LLAFFLQ 237 (428)
T ss_pred hhhhheeeeccc------c------------------------ccccccccccccchhhhcccchHHHH----HHHHHHH
Confidence 66655 677210 0 00011112224445666666553332 3333333
Q ss_pred hhchhHHHhhHHHHHHh-cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccC
Q 010375 298 LTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFG 376 (512)
Q Consensus 298 ~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (512)
...........+++.+. .|.+ ...+.......+..+++.++.++++||+|+|+.+..+..+.+++.+.+.+..
T Consensus 238 ~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~----- 311 (428)
T PF13347_consen 238 WLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLG----- 311 (428)
T ss_pred HhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHH-----
Confidence 33444555556666665 4544 5566777788899999999999999999999999999988888877766652
Q ss_pred CCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCCh-------hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 010375 377 PNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPL-------ETRSAGQSITVAVNLFFTFVIAQIFLTLLCS 449 (512)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-------~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~ 449 (512)
..+.+...+...+.+.+.+... ...+++.+|..+. +..|...|+.+....++..+++.+.+.+.+.
T Consensus 312 ------~~~~~~~~i~~~l~gi~~~~~~-~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~ 384 (428)
T PF13347_consen 312 ------PGSPWLVLILFILAGIGYGAFF-VIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLAL 384 (428)
T ss_pred ------hhhHHHHHHHHHHhHhhhcccc-cccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHH
Confidence 1335566666666776766444 5567888888863 3468889999999999999999999998876
Q ss_pred cch
Q 010375 450 FKF 452 (512)
Q Consensus 450 ~g~ 452 (512)
.|+
T Consensus 385 ~Gy 387 (428)
T PF13347_consen 385 VGY 387 (428)
T ss_pred hCc
Confidence 653
|
|
| >PRK15462 dipeptide/tripeptide permease D; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.7e-18 Score=164.85 Aligned_cols=356 Identities=13% Similarity=0.087 Sum_probs=204.8
Q ss_pred cccCcchhHHHHHHHHHHHHHHHHhhhhhhhhh-chhHHHHHHHHHHHHHHHHHHhhc-hHHHHHHHHHHHhhhhhhccc
Q 010375 78 CKYDNQGLAAFTSSLYLAGLVASFVASPVTRDY-GRRASIICGGISFLLGAALNAAAA-NLAMLLTGRILLGVGIGFGNQ 155 (512)
Q Consensus 78 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~~~~ 155 (512)
+|+++.+.+.+.+.+.....++.+++|+++||+ ||||++.++.++..++.++++..+ +...++++..+.++|.|...+
T Consensus 40 lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~ 119 (493)
T PRK15462 40 LKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKS 119 (493)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccc
Confidence 488999999999999999999999999999999 999999999999999988776543 223344444455566676777
Q ss_pred hhhhhhhhcCCCC--CchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhcc----CCChh
Q 010375 156 AVPLYLSEMAPTH--LRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILL----PETPN 229 (512)
Q Consensus 156 ~~~~~i~~~~~~~--~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~----~e~p~ 229 (512)
...++++|.+|++ +|..++++...+.++|..++|.+ .+...+..|||+.|.+.++..++..+..++. ++...
T Consensus 120 ~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l--~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~~ 197 (493)
T PRK15462 120 NVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIA--CGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRG 197 (493)
T ss_pred cHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHH--HHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhccCCC
Confidence 7788999999875 68999999999999999999999 5666667799999998766544444333221 11100
Q ss_pred HHHHcCCHHHHHH-H-HHHHc---------CCchhhHHHHH-HHH--H-H--H-hhcccCcccHHHhcccchhHHHH--H
Q 010375 230 SLIERGKKVEGRR-V-LEKIR---------GTKEVNAEYQD-MVD--A-S--E-LANSIKHPFRNILERRNRPQLVM--A 289 (512)
Q Consensus 230 ~l~~~~~~~~~~~-~-~~~~~---------~~~~~~~~~~~-~~~--~-~--~-~~~~~~~~~~~~~~~~~~~~~~~--~ 289 (512)
. ..+..+++... . ..... .......+... ..- . . . --.-.. ++ .+...++++.. .
T Consensus 198 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~er~r~~~~~~ 272 (493)
T PRK15462 198 V-NKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATIIGLGVLAKIYR---KA-ENQKQRKELGLIVT 272 (493)
T ss_pred C-CCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hc-CCHHHHhhHHHHHH
Confidence 0 00000000000 0 00000 00000000000 000 0 0 0 000000 00 00111122211 1
Q ss_pred HHHHHHHHhhchhHHHhhHHHHHHh------cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCC--h-----hHHHHh
Q 010375 290 IFMPMFQILTGINSILFYAPVLFQS------MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGR--R-----ALLISG 356 (512)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~--r-----~~~~~~ 356 (512)
+++.....+..+.....-+..+.++ .|++ ....+..++..+..++.+++..++-.|..+ | .-+.++
T Consensus 273 l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~-ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g 351 (493)
T PRK15462 273 LTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYT-VPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALG 351 (493)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHhccchhccee-eCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHH
Confidence 1111221222222222223333332 2332 235667778888888888877776555522 2 125677
Q ss_pred hHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHH-HHH
Q 010375 357 GIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVN-LFF 435 (512)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~-~~g 435 (512)
.++.+++++++.+..... +.+ ...+.++.+... ++.........|+..+.++++.|++.+++.+|...... .+|
T Consensus 352 ~~~~g~~f~~l~~~~~~~-~~~---~~~s~~wl~~~~-~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~ 426 (493)
T PRK15462 352 LGLMSAGFCILTLSARWS-AMY---GHSSLPLMVLGL-AVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIA 426 (493)
T ss_pred HHHHHHHHHHHHHHHhhc-CCC---CCcCHHHHHHHH-HHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 777777777665543221 111 112233333333 33344566778888899999999999999999986643 566
Q ss_pred HHHHHHHHHHH
Q 010375 436 TFVIAQIFLTL 446 (512)
Q Consensus 436 ~~~~~~~~~~~ 446 (512)
..++..+.+..
T Consensus 427 ~~~~g~~~~~~ 437 (493)
T PRK15462 427 NYLAGVIADQT 437 (493)
T ss_pred HHHHHHHHHHh
Confidence 66666555544
|
|
| >TIGR01272 gluP glucose/galactose transporter | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.4e-18 Score=160.82 Aligned_cols=277 Identities=11% Similarity=0.076 Sum_probs=189.8
Q ss_pred HhhchHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccC-----------
Q 010375 131 AAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLE----------- 199 (512)
Q Consensus 131 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~----------- 199 (512)
+...+|+.++++-++.|.|.+...+..+.++++..+++++++.+++.+..+++|..++|.++.......
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 345789999999999999999999999999999999999999999999999999999999964333211
Q ss_pred ---CCchhHHHHhhHHHHHHHHHHhhc--cCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCccc
Q 010375 200 ---TWGWRLSLGLAAAPALMMTVGGIL--LPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPF 274 (512)
Q Consensus 200 ---~~~Wr~~f~~~~~~~~~~~~~~~~--~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (512)
..+||++|++.+.+.++..+.+.+ +||... ++.++ . ..++ ....
T Consensus 85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~-----~~~~~-----------------------~-~~~~--~~~~ 133 (310)
T TIGR01272 85 NAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQE-----ADVAR-----------------------V-SSGD--TTQK 133 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCc-----ccccc-----------------------c-cccc--ccch
Confidence 147999999776665555444444 455321 00000 0 0000 0011
Q ss_pred HHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHh---cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChh
Q 010375 275 RNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS---MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRA 351 (512)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~ 351 (512)
+..+++ +.++...+..++..........|.+.|+++ +|+++.+++...+....+.++|+++.+++.||+++|+
T Consensus 134 ~~~~~~----~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~ 209 (310)
T TIGR01272 134 TSAFQF----THLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGR 209 (310)
T ss_pred hhHHhh----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH
Confidence 112222 223444555666665677888888888864 5899999999999999999999999999999999999
Q ss_pred HHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHH
Q 010375 352 LLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAV 431 (512)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~ 431 (512)
.+..+..+..++..+.... + .........+.+.+.+..+.. ..+...+..|++ .+++.++. ..
T Consensus 210 ~l~~~~~l~~~~~~l~~~~-------------~-~~~~~~~~~l~g~~~s~i~P~-~~s~a~~~~~~~-~~~asai~-~~ 272 (310)
T TIGR01272 210 YLAFNAFLAVLLSIGAALT-------------H-GYVAMWFVLALGLFNSIMFPT-IFSLALNALGRH-TSQGSGIL-CL 272 (310)
T ss_pred HHHHHHHHHHHHHHHHHHc-------------C-CHHHHHHHHHHHHHHHHHHHH-HHHHHHhhhhhh-hhhhHHHH-HH
Confidence 8877766665554333221 1 111222334455555544433 345666767653 55666764 67
Q ss_pred HHHHHHHHHHHHHHHHhhcchhhHHHHH
Q 010375 432 NLFFTFVIAQIFLTLLCSFKFGIFLFFA 459 (512)
Q Consensus 432 ~~~g~~~~~~~~~~~~~~~g~~~~~~~~ 459 (512)
+.+|+++.|.+.|.+.|..+....+.+.
T Consensus 273 ~~~Gg~i~P~l~G~lad~~g~~~a~~v~ 300 (310)
T TIGR01272 273 AIVGGAIVPLLQGSLADCLGIQLAFALP 300 (310)
T ss_pred HHhcchHHHHHHHHHHHhccchHHHHHH
Confidence 7899999999999999988865554433
|
Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity. |
| >COG2270 Permeases of the major facilitator superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.6e-18 Score=157.47 Aligned_cols=354 Identities=12% Similarity=0.054 Sum_probs=245.2
Q ss_pred CcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHH-HHHHHHHHHHHHHHHHhhch--H-HHHHHHHHHHhhhhhhccch
Q 010375 81 DNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRAS-IICGGISFLLGAALNAAAAN--L-AMLLTGRILLGVGIGFGNQA 156 (512)
Q Consensus 81 s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~-l~~~~~~~~~~~~~~~~~~~--~-~~l~~~r~l~G~~~~~~~~~ 156 (512)
+.+..+...++..+..++-+|+.|.++|+.|+||. +-....+..+...+..++++ + +..++.-.+..++.....+.
T Consensus 56 ~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vf 135 (438)
T COG2270 56 STAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVF 135 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhhee
Confidence 56778888999999999999999999999997654 55566666667777777755 4 45555678888999999999
Q ss_pred hhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhccc----------------CCCchhHHHHhhHHHHHHHH-H
Q 010375 157 VPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKL----------------ETWGWRLSLGLAAAPALMMT-V 219 (512)
Q Consensus 157 ~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~----------------~~~~Wr~~f~~~~~~~~~~~-~ 219 (512)
-.+++.+..++++-++..++-.....+|..+.-+........ +..+=|..+.+.++..++.. .
T Consensus 136 yds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iP 215 (438)
T COG2270 136 YDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALP 215 (438)
T ss_pred hhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhH
Confidence 999999999998888887776666666666655543222111 23456778888777766554 4
Q ss_pred HhhccCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhh
Q 010375 220 GGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILT 299 (512)
Q Consensus 220 ~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (512)
.++..|+.++-. ..... .....-++.+.+++++.++++ +..+.+..+...-
T Consensus 216 m~~~v~~~~~~~---~~~~~----------------------~l~~g~k~L~~t~k~i~~~~~----i~~FLiA~~~~~D 266 (438)
T COG2270 216 MILNVHDAEKIS---SPPPT----------------------ALRNGFKELKSTFKEIRGRKN----LVLFLIARFFYID 266 (438)
T ss_pred HHhccccccccc---ccchH----------------------HHHHHHHHHHHHHHHHhcccc----hHHHHHHHHHHHh
Confidence 445566655200 00000 000011112344555554444 4445555555566
Q ss_pred chhHHHhhHHHHHH-hcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCC
Q 010375 300 GINSILFYAPVLFQ-SMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPN 378 (512)
Q Consensus 300 ~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (512)
+.+....+...+-. ++|++..+.........+.+++|.++.|++.||+|.|+++..+.++..+..+...+..
T Consensus 267 Gv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~------- 339 (438)
T COG2270 267 GVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLE------- 339 (438)
T ss_pred hHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHcc-------
Confidence 77777888888876 6999999999999999999999999999999999999888888776665554443321
Q ss_pred cccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcch-hhHHH
Q 010375 379 QELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKF-GIFLF 457 (512)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~-~~~~~ 457 (512)
..........+.+...+ +....+.++..+..|+++.++..|+++..++..++.+|...+.+.+..+. ..-+.
T Consensus 340 ------~~~~f~i~gll~g~s~G-~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~ 412 (438)
T COG2270 340 ------GELDFWILGLLVGTSLG-GAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVL 412 (438)
T ss_pred ------ccHHHHHHHHHHHHhcc-hHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHH
Confidence 12233334444555555 33445578889999999999999999999999999999999999988773 33444
Q ss_pred HHHHHHHHHHHHhhccccCC
Q 010375 458 FAGWVTIMTIFVYFFLPETK 477 (512)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~ 477 (512)
..++.++.+++.+..+|+.+
T Consensus 413 ~i~vll~iGl~~L~~v~~~~ 432 (438)
T COG2270 413 SIIVLLLIGLLLLLRVKVPG 432 (438)
T ss_pred HHHHHHHhhHhhEEeecCCC
Confidence 44555566666666666543
|
|
| >PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.5e-19 Score=163.12 Aligned_cols=352 Identities=15% Similarity=0.132 Sum_probs=211.7
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHH--HHHHHH-HHHhh----chH-HHHHHHHHHHhhhh
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGIS--FLLGAA-LNAAA----ANL-AMLLTGRILLGVGI 150 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~--~~~~~~-~~~~~----~~~-~~l~~~r~l~G~~~ 150 (512)
|+|.+++|.+.++..+...+.+++.|.++||+|.||-++..+.+ ...+.. ...+. .|+ ...+++-+..|+..
T Consensus 39 GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f 118 (412)
T PF01306_consen 39 GLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVF 118 (412)
T ss_dssp ---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999977655433322 222222 22222 232 23333444455555
Q ss_pred hhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhcc-CCChh
Q 010375 151 GFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILL-PETPN 229 (512)
Q Consensus 151 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~-~e~p~ 229 (512)
....++.-+++.++. ++.+.-.|-.....++|.+++..+++ .+.+ .+-+..|++....+++..++.++. |+.++
T Consensus 119 ~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G--~L~~-i~p~~~fwi~s~~~~il~lll~~~~~~~~~ 193 (412)
T PF01306_consen 119 NAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAG--ILFN-INPNIIFWIASAAAIILLLLLLLLKPDVPP 193 (412)
T ss_dssp TTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHH--HHHH-HHHHHHHHHHHHHHHHHHHHHHSS---SSS
T ss_pred cccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhh--eeee-eCccHHHHHHHHHHHHHHHHHHHcCCcCch
Confidence 555666666665554 23345566666777777777777743 2222 244677887776666555554443 33331
Q ss_pred HHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHH
Q 010375 230 SLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAP 309 (512)
Q Consensus 230 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (512)
.....+ ....++++.+.+++.+..+.++ ++.+.+......+.+..+....+
T Consensus 194 ~~~~~~----------------------------~~~~~~~~~~~~~~~~l~k~~~-fw~~~l~v~g~~~~Y~vfdqqf~ 244 (412)
T PF01306_consen 194 QAEVAD----------------------------ALGAKKDKVSLKDVLSLFKMRN-FWFFVLFVIGVAAIYDVFDQQFP 244 (412)
T ss_dssp SS-SST----------------------------TSSS------HHHHHHHTTSHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhc----------------------------ccccCCCCCcHHHHHHHhcchh-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000 0001111223343333222222 23333333333334455544455
Q ss_pred HHHHhc----CCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccch
Q 010375 310 VLFQSM----GFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSF 385 (512)
Q Consensus 310 ~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (512)
.|...+ +.+....|++.+..-+.+++.-.+..++.+|+|.|+.++++..++.+-.....+. ++
T Consensus 245 ~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~-------------~~ 311 (412)
T PF01306_consen 245 IYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFA-------------TN 311 (412)
T ss_dssp HHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT---------------S
T ss_pred HHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhh-------------cc
Confidence 555543 2233557888888889999999999999999999999999988888887776664 22
Q ss_pred hhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHH-HHHHHHHHHHHHHHHHHHHhhcchh-hHHHHHHHHH
Q 010375 386 SILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSIT-VAVNLFFTFVIAQIFLTLLCSFKFG-IFLFFAGWVT 463 (512)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~-~~~~~~g~~~~~~~~~~~~~~~g~~-~~~~~~~~~~ 463 (512)
.+.....-.+-+..+.....+. .-++++.+|++..++...+. +...+++.++.+.+.|.++|+.|+. .+++.+++..
T Consensus 312 ~~~i~~~klLH~~e~~l~lva~-fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~ 390 (412)
T PF01306_consen 312 PWVISLIKLLHALEFPLLLVAA-FKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVL 390 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHH
Confidence 4455555566666665554444 57888999999999998885 5778899999999999999999975 5556666666
Q ss_pred HHHHHHhhccccCCC
Q 010375 464 IMTIFVYFFLPETKG 478 (512)
Q Consensus 464 ~~~~~~~~~~~~~~~ 478 (512)
...++..+.+++.++
T Consensus 391 ~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 391 PFTLISAFTLKKDKK 405 (412)
T ss_dssp HHHHHHHHHS--SSS
T ss_pred HHHHHheeeecCCCc
Confidence 666666666655443
|
The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A. |
| >KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.4e-18 Score=161.91 Aligned_cols=403 Identities=15% Similarity=0.165 Sum_probs=239.2
Q ss_pred hcCCCchHHHHHHHHHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHH
Q 010375 19 YQGKVTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLV 98 (512)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i 98 (512)
+.++.+||...++ .+..++.+...+++.+. +-++.++.. .+-+.+..|++.++..++.++
T Consensus 27 ~~~~t~wrsi~l~---~~~sfl~~v~~sI~~~s--~wpYl~~lD---------------~~A~~~ffG~viaa~slg~~i 86 (488)
T KOG2325|consen 27 DERKTNWRSIYLA---LLNSFLVAVQFSIYLTS--MWPYLQKLD---------------PTATATFFGLVIAASSLGHAI 86 (488)
T ss_pred cccCCchHhHHHH---HHHHHHHhhhheEEEee--cchhhhhcC---------------CCCCcchhhHHHHHHHHHHHh
Confidence 3445555554444 56666777777776655 445555442 355889999999999999999
Q ss_pred HHHhhhhhhhhhch-hHHHHHHHHHHHHHHHHH-Hhh---c-hHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchh
Q 010375 99 ASFVASPVTRDYGR-RASIICGGISFLLGAALN-AAA---A-NLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGG 172 (512)
Q Consensus 99 ~~~~~g~l~dr~Gr-r~~l~~~~~~~~~~~~~~-~~~---~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 172 (512)
+++..|++..|.+. |+.++.|.++..++.++. ++. + .-+.++++|++.|+|.+. .....+|+++....++|.|
T Consensus 87 ~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~~~dR~r 165 (488)
T KOG2325|consen 87 FSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGN-FAVLRAYIADASTVEDRPR 165 (488)
T ss_pred cchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCccc-HHHHHHHHHhccCccchHH
Confidence 99999999999986 788999999999999988 433 3 568899999999998764 4688999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCCCc-----------hhHHHHhhHHHHHHHHHHhhc-cCCChhHHHHcCCHHHH
Q 010375 173 LNMMFQLATTLGIFTANMINYGTQKLETWG-----------WRLSLGLAAAPALMMTVGGIL-LPETPNSLIERGKKVEG 240 (512)
Q Consensus 173 ~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~-----------Wr~~f~~~~~~~~~~~~~~~~-~~e~p~~l~~~~~~~~~ 240 (512)
+++....+..+|.++||.+.....-....| +..+-|+.+++.++.+++.++ ++|.++...+++.+++
T Consensus 166 A~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~~~- 244 (488)
T KOG2325|consen 166 AFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKKKRSV- 244 (488)
T ss_pred HHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCccccccccc-
Confidence 999999999999999998854333222212 234567777777776665544 6776531111100000
Q ss_pred HHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhH-HHhhHHHHHHhcCCCC
Q 010375 241 RRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINS-ILFYAPVLFQSMGFKG 319 (512)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~ 319 (512)
++.+ ....+....+..+...+.+.+..+.....+.. -....+.....++++.
T Consensus 245 -----------------~~~~----------~~~~~~~~~~~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~ 297 (488)
T KOG2325|consen 245 -----------------EEEK----------SDIEKVKKPKLDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTG 297 (488)
T ss_pred -----------------hhhc----------cchhhhccCChhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhcccc
Confidence 0000 00000111111122222233333333322333 3334444455577776
Q ss_pred chhhH----HHHHHHHHHHHHHHHHHHHH-hhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccc--------cchh
Q 010375 320 DASLY----SSAMTGAVLASSTLISIATV-DKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELS--------KSFS 386 (512)
Q Consensus 320 ~~~~~----~~~~~~~~~~~~~~~~g~l~-d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 386 (512)
.++-. ..++.++......+...... .++.+|+.+..+++....+..+..........+.+..+ ....
T Consensus 298 ~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~ 377 (488)
T KOG2325|consen 298 SEAVLYNGITLSISGILSVILLLLYIFTRLGKIDKRRIILLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYS 377 (488)
T ss_pred chHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccceeeeehHHHHHHhhheeeeeccccccccccccccccCcCcccch
Confidence 65533 33333333333333333332 33345556555544444444333332222111111000 0111
Q ss_pred h-------HHHHHHHHHHHHhhhcc----cceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhH
Q 010375 387 I-------LVVVVICLFVLAFGWSW----GPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIF 455 (512)
Q Consensus 387 ~-------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~ 455 (512)
| ......+.....++.++ .+. .++.+|...++.+++..++.......+..++|.+........|+...
T Consensus 378 wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~-~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v 456 (488)
T KOG2325|consen 378 WCDTTTAVPLILYLISFIVVFGIAFPFISTAL-DTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPV 456 (488)
T ss_pred hhccCcccChhhheeehhheeccccccccchH-HHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHH
Confidence 1 01111111122222222 223 35557888999999999999999999999999999999988898877
Q ss_pred HHHHHHHHHHHHHHhh
Q 010375 456 LFFAGWVTIMTIFVYF 471 (512)
Q Consensus 456 ~~~~~~~~~~~~~~~~ 471 (512)
+.+..+..++....+.
T Consensus 457 ~~~~~~~~l~~~~l~~ 472 (488)
T KOG2325|consen 457 WIILLCLLLVVAALWI 472 (488)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7777666655555443
|
|
| >COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.1e-16 Score=146.04 Aligned_cols=359 Identities=18% Similarity=0.121 Sum_probs=225.6
Q ss_pred cccCcchhHHHHHHHHHHHHHHHHhhhhhhhhh-chhHHHHHHHHHHHHHHHHHHhhc--hHHHHHHHHHHHhhhhhhcc
Q 010375 78 CKYDNQGLAAFTSSLYLAGLVASFVASPVTRDY-GRRASIICGGISFLLGAALNAAAA--NLAMLLTGRILLGVGIGFGN 154 (512)
Q Consensus 78 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~ 154 (512)
+|+++++..-+.+.|.--.-+..+++|+++||+ |+|+++.+|.++..+|.++.+.+. +...++++-.+.++|.|..=
T Consensus 56 Lg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K 135 (498)
T COG3104 56 LGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFK 135 (498)
T ss_pred CCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhcccccc
Confidence 789999999999999988889999999999995 999999999999999999999984 78899999999999999999
Q ss_pred chhhhhhhhcCCCC--CchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhccCC------
Q 010375 155 QAVPLYLSEMAPTH--LRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPE------ 226 (512)
Q Consensus 155 ~~~~~~i~~~~~~~--~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e------ 226 (512)
+...+++.|.+|++ +|-..++++.++.++|.+++|++ .....+..||...|.+.++-..+.++..+..+.
T Consensus 136 ~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i--~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~ 213 (498)
T COG3104 136 PNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPII--TGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIG 213 (498)
T ss_pred ccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHH--HHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCC
Confidence 99999999999864 46778999999999999999999 677777889999999988877776665544321
Q ss_pred ---ChhHHHHcCCHHHHHHHHHHHcCC---c-hhhHHHHHHHHH----------HHhhcccCcccHHHhcccchhHHHHH
Q 010375 227 ---TPNSLIERGKKVEGRRVLEKIRGT---K-EVNAEYQDMVDA----------SELANSIKHPFRNILERRNRPQLVMA 289 (512)
Q Consensus 227 ---~p~~l~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (512)
.|..+..+................ . ............ .+..+..+.. .+..|....-++++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~er~r~~~~~~Lfl~ 292 (498)
T COG3104 214 GVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVF-DERRRLLAAIPLFLF 292 (498)
T ss_pred CCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccH-HHHHHHHHHHHHHHH
Confidence 111111111110000000000000 0 000000000000 0000000000 110011111122222
Q ss_pred HHHHHHHHhhchhHHHhhHHHHHHh--cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCCh-------hHHHHhhHHH
Q 010375 290 IFMPMFQILTGINSILFYAPVLFQS--MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRR-------ALLISGGIQM 360 (512)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r-------~~~~~~~~~~ 360 (512)
..+.+.+..-....++.|.....++ +|++ -...+..+...+.-++.+++..++..|.+++ .-+.++..++
T Consensus 293 ~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~-vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~ 371 (498)
T COG3104 293 AVIFWALYEQMGSSLNLYADRNVNRQIFGFE-VPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILA 371 (498)
T ss_pred HHHHHHHHHhccchHHHHHHHhhccccccee-cCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHH
Confidence 2233333333344445555444433 3332 3345677777888888888888877774332 2234555555
Q ss_pred HHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHH
Q 010375 361 ITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIA 440 (512)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~ 440 (512)
..+++++.........+ +...+....+...+..........|+..+++....|+...+..++........+..++.
T Consensus 372 g~~fl~l~~~~~~~~~~----~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g 447 (498)
T COG3104 372 GLGFLILLLAGIWFGGP----SGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGG 447 (498)
T ss_pred HHHHHHHHHHHHhhcCC----CCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhc
Confidence 55555555442221111 11223333444444455556677888888999999999999999999888888888888
Q ss_pred HHHH
Q 010375 441 QIFL 444 (512)
Q Consensus 441 ~~~~ 444 (512)
.+.+
T Consensus 448 ~va~ 451 (498)
T COG3104 448 QVAG 451 (498)
T ss_pred eecc
Confidence 7776
|
|
| >PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon | Back alignment and domain information |
|---|
Probab=99.72 E-value=5.7e-15 Score=135.04 Aligned_cols=349 Identities=13% Similarity=0.078 Sum_probs=228.4
Q ss_pred ccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhc-----hhHH-HHHHHHHHHHHHHHHHhh-----c-------hH--
Q 010375 77 YCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYG-----RRAS-IICGGISFLLGAALNAAA-----A-------NL-- 136 (512)
Q Consensus 77 ~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~G-----rr~~-l~~~~~~~~~~~~~~~~~-----~-------~~-- 136 (512)
|++++....+.+.+..++... ..+.+|+.+|+.+ ||.. +..|.++...+..+.+++ . +.
T Consensus 9 EL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~ 87 (403)
T PF03209_consen 9 ELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWL 87 (403)
T ss_pred HhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHH
Confidence 458889999999998887755 6899999999999 7754 555777776666665553 2 12
Q ss_pred H--HHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCch-hHHHHh--hH
Q 010375 137 A--MLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGW-RLSLGL--AA 211 (512)
Q Consensus 137 ~--~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~W-r~~f~~--~~ 211 (512)
+ ...+.-.+.|+|.+.......++++|..|+++|+++.++.....-+|.+++..+ .+...+.++- |..-.+ .+
T Consensus 88 g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~--~g~lL~~~s~~rL~~v~~~~a 165 (403)
T PF03209_consen 88 GLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIV--FGRLLDPFSPERLIQVIQGVA 165 (403)
T ss_pred HHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHH--HHHHccccCHHHHHHHHHHHH
Confidence 2 344456789999999999999999999999999999999999999999999998 5555554432 222222 22
Q ss_pred HHHHHHHHHhhccCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHH
Q 010375 212 APALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIF 291 (512)
Q Consensus 212 ~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (512)
++.++..++..+=.|.++.... ....+++...+..++++..++..++++...+
T Consensus 166 ~i~~~l~~ia~wg~E~r~~~~~---------------------------~~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~ 218 (403)
T PF03209_consen 166 LIALLLNLIALWGQEPRRSRRA---------------------------AAAERPRPPFREAWRQVWASPQARRFFVFLF 218 (403)
T ss_pred HHHHHHHHHHHHhcccCCcccc---------------------------cCCCCCCccHHHHHHHHHhCCChhHHHHHHH
Confidence 2222222222332232210000 0000111111234455555566555555444
Q ss_pred HHHHHHhhchhHHHhhHHHH-HHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHh-hcCChhHHHHhhHHHHHHHHHHHH
Q 010375 292 MPMFQILTGINSILFYAPVL-FQSMGFKGDASLYSSAMTGAVLASSTLISIATVD-KLGRRALLISGGIQMITCQVIVSI 369 (512)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-~~~~r~~~~~~~~~~~~~~~~~~~ 369 (512)
+..+.. ..--..+-.| -+-+|+++.+...+....+.+.+++-.+.+++.. |.++++...+++....+++.++..
T Consensus 219 l~t~a~----~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~ 294 (403)
T PF03209_consen 219 LGTLAF----FMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIIL 294 (403)
T ss_pred HHHHHH----HhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 433321 2222222222 2348999999999999999999999999998766 678888888888888887777665
Q ss_pred HHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 010375 370 ILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCS 449 (512)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~ 449 (512)
... ..+.+.+.....+++++.+...... ...+.+..++++.|..+|.....+.+...++..+.|.+.|.
T Consensus 295 a~~----------~~~~~~~~~~~~l~G~g~G~f~vga-ls~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~ 363 (403)
T PF03209_consen 295 AGP----------LGSPWLFRPGVFLLGLGNGLFTVGA-LSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDL 363 (403)
T ss_pred HHh----------cccchHHHHHHHHHHHhhhHHHHHH-HHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 532 2335566666777777766554443 24445888888999999999999999998999988888774
Q ss_pred c----------chhhHHHHHHHHHHHHHHHh
Q 010375 450 F----------KFGIFLFFAGWVTIMTIFVY 470 (512)
Q Consensus 450 ~----------g~~~~~~~~~~~~~~~~~~~ 470 (512)
. +|...+..-++.++.++++.
T Consensus 364 ~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 364 VRALFGNSPALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred HHHhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 2 24444555555555555443
|
It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase. |
| >KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.4e-15 Score=149.31 Aligned_cols=383 Identities=13% Similarity=0.118 Sum_probs=252.4
Q ss_pred HHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhch
Q 010375 33 VAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGR 112 (512)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Gr 112 (512)
+.++..+.++...+.+... +..+.+.| +++.++.|++.+.+=++..+...+..+..-|.-|
T Consensus 101 ~l~~~~~~q~l~~~y~~s~--IttiErRF-----------------~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~Hr 161 (735)
T KOG3626|consen 101 LLSLAAFAQGLYVGYFNSV--ITTIERRF-----------------KISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHR 161 (735)
T ss_pred HHHHHHHHHHhhhhhhhhh--hhhhhhhc-----------------CCCCCcceeEeeecccchhhhhHhHHHhccccCc
Confidence 3345555665555544433 33444444 8999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhc-------------------h--------------------------------HH-HHH
Q 010375 113 RASIICGGISFLLGAALNAAAA-------------------N--------------------------------LA-MLL 140 (512)
Q Consensus 113 r~~l~~~~~~~~~~~~~~~~~~-------------------~--------------------------------~~-~l~ 140 (512)
-+.+-.|+++++++++++++-+ + ++ .++
T Consensus 162 Pr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff 241 (735)
T KOG3626|consen 162 PRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFF 241 (735)
T ss_pred cceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHH
Confidence 9999999999999999987630 0 22 567
Q ss_pred HHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcc----c--CC-----------Cch
Q 010375 141 TGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQK----L--ET-----------WGW 203 (512)
Q Consensus 141 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~----~--~~-----------~~W 203 (512)
++.++.|+|....++...+|+-|...+++-+..+|+......+|.++|.+++..... . .. .-|
T Consensus 242 ~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAW 321 (735)
T KOG3626|consen 242 LGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAW 321 (735)
T ss_pred HHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHH
Confidence 789999999999999999999999999999999999999999999999888543321 1 00 126
Q ss_pred hHHHHhhHHHHHHHHHHhhccCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHH---Hhcc
Q 010375 204 RLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRN---ILER 280 (512)
Q Consensus 204 r~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 280 (512)
..-|++.+.+.++..+.++++|.+.+.-.++ .++++ .+....++. ............++ .+++
T Consensus 322 WlGFLi~g~~~~~~a~p~f~fPk~lp~~~~~---~~~~~-~~~~k~~~~----------~~~~~~~~~~~ikdfp~s~~~ 387 (735)
T KOG3626|consen 322 WLGFLICGALLLFSAVPLFFFPKELPKSQKR---KRARD-LHVLKTESG----------GAKSDKTFGKKIKDFPKSIKR 387 (735)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcccCcccccc---chhhh-hcccccccc----------cccCCcchhhhHHHHHHHHHH
Confidence 6667788888888877778887664211110 00000 000000000 00000000111112 2222
Q ss_pred cchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHh-cCCCCchhhHHHHHHHH-HHHHHHHHHHHHHhhcCC--hhHHHHh
Q 010375 281 RNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGA-VLASSTLISIATVDKLGR--RALLISG 356 (512)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~~~--r~~~~~~ 356 (512)
....++++...+...+....+..+.+|+|.|++. +|.+...+..+.....+ +..+|.+++|++..|+.. |....+.
T Consensus 388 ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~ 467 (735)
T KOG3626|consen 388 LLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFV 467 (735)
T ss_pred HhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHH
Confidence 2334457778888888888899999999999987 99999999888866655 456688899999998753 5555555
Q ss_pred hHHHHHHHHHHHHHHhhc--------------------c-C------------------C--------------------
Q 010375 357 GIQMITCQVIVSIILGLK--------------------F-G------------------P-------------------- 377 (512)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~--------------------~-~------------------~-------------------- 377 (512)
.+...++++......... . . |
T Consensus 468 ~~~~~l~l~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~ 547 (735)
T KOG3626|consen 468 IVCSVLSLLFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTES 547 (735)
T ss_pred HHHHHHHHHHHHHHHEecCCCCcccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCccc
Confidence 444444444422211100 0 0 0
Q ss_pred --Cc-----------c----------------cc-cchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHH
Q 010375 378 --NQ-----------E----------------LS-KSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSI 427 (512)
Q Consensus 378 --~~-----------~----------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~ 427 (512)
.+ . .+ ......+++.+++..+..+.+..|. +.++-+.+|+++|..++|+
T Consensus 548 ~~~~~~~~~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~-~~i~LR~V~~e~ks~AlG~ 626 (735)
T KOG3626|consen 548 SGTSDGNTIYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAVPG-MLIVLRCVPPEEKSFALGF 626 (735)
T ss_pred ccCCCCceeeccccccccccCCCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccCcc-eEEEEEccCchhchhhhHH
Confidence 00 0 00 0111233334444444444444555 4555699999999999999
Q ss_pred HHHHHH-HHHHHHHHHHHHHHhh
Q 010375 428 TVAVNL-FFTFVIAQIFLTLLCS 449 (512)
Q Consensus 428 ~~~~~~-~g~~~~~~~~~~~~~~ 449 (512)
..++.+ +|.+-+|.++|+++|.
T Consensus 627 ~~~~irllg~IPsPIifG~~ID~ 649 (735)
T KOG3626|consen 627 QWMLIRLLGFIPSPIIFGAVIDT 649 (735)
T ss_pred HHHHHHHHhcCCchHhhhhhHhh
Confidence 988766 5778899999999995
|
|
| >PRK10642 proline/glycine betaine transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.2e-16 Score=155.68 Aligned_cols=169 Identities=16% Similarity=0.186 Sum_probs=129.7
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHH---HHhhchHHHHHHHHHHHhhhhhhccc
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAAL---NAAAANLAMLLTGRILLGVGIGFGNQ 155 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~---~~~~~~~~~l~~~r~l~G~~~~~~~~ 155 (512)
|.+..+.++..+...++..++.+++|+++||+|||+++..+.++..++.+. ...+++...++++|++.|++.+....
T Consensus 282 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g 361 (490)
T PRK10642 282 HYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTG 361 (490)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 667777788888889999999999999999999999988877654433322 22345677888899999988777777
Q ss_pred hhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCC-CchhHHHHhhHHHHHHHHHHhhccCCChhHHHHc
Q 010375 156 AVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLET-WGWRLSLGLAAAPALMMTVGGILLPETPNSLIER 234 (512)
Q Consensus 156 ~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~-~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~ 234 (512)
....++.|.+|++.|++++++......++..++|.+. ....+. .+|+.++++..+++++.++..+++||+|+|+.++
T Consensus 362 ~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~--g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~pes~~~~~~~ 439 (490)
T PRK10642 362 VMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLA--AWLVESTQNLMMPAYYLMVVAVIGLITGVTMKETANRPLKG 439 (490)
T ss_pred HHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHH--HHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccCCCCCC
Confidence 7788889999999999999974444455556677663 332222 3578887777777777777777789999998765
Q ss_pred -----CCHHHHHHHHHHHcC
Q 010375 235 -----GKKVEGRRVLEKIRG 249 (512)
Q Consensus 235 -----~~~~~~~~~~~~~~~ 249 (512)
++.||+++.++++++
T Consensus 440 ~~~~~~~~~~a~~~l~~~~~ 459 (490)
T PRK10642 440 ATPAASDIQEAKEILVEHYD 459 (490)
T ss_pred ccccccchhhHHHHhhcccc
Confidence 889999999998874
|
|
| >PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs) | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.3e-17 Score=164.01 Aligned_cols=365 Identities=14% Similarity=0.104 Sum_probs=3.0
Q ss_pred ccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhc----------------------
Q 010375 77 YCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAA---------------------- 134 (512)
Q Consensus 77 ~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~---------------------- 134 (512)
.|+++.++.|++.+.+-++..+..++..++.+|..|-|.+-.|.++.+++++++++-+
T Consensus 32 RF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~ 111 (539)
T PF03137_consen 32 RFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSISS 111 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcccccccccccccccc
Confidence 3499999999999999999999999999999998888999999999999998876510
Q ss_pred ----------------------------hHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHH
Q 010375 135 ----------------------------NLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIF 186 (512)
Q Consensus 135 ----------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~ 186 (512)
-+..++++.++.|+|....++...+|+-|..++++-+..+|+..+...+|.+
T Consensus 112 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa 191 (539)
T PF03137_consen 112 NLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPA 191 (539)
T ss_dssp ----------------------------------------SSS-------------------------------------
T ss_pred ccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHH
Confidence 0356788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccc-------C---------CC----chhHHHHhhHHHHHHHHHHhhccCCChhHHHHcCCHHHHHHHHHH
Q 010375 187 TANMINYGTQKL-------E---------TW----GWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEK 246 (512)
Q Consensus 187 ~~~~~~~~~~~~-------~---------~~----~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~ 246 (512)
+|.+++...... + +. .|-.-|++.+++.++..+..+++|+..+...+ ..++.+...++
T Consensus 192 ~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~~~~--~~~~~~~~~~~ 269 (539)
T PF03137_consen 192 LGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPGTSE--RQEEKESSERK 269 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCccc--ccchhhhhhcc
Confidence 998885322210 0 01 25445666666666665555556654321100 00000000000
Q ss_pred HcCCchhhHHHHHHHHHHHhhcccCcccHH---HhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHh-cCCCCchh
Q 010375 247 IRGTKEVNAEYQDMVDASELANSIKHPFRN---ILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS-MGFKGDAS 322 (512)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~ 322 (512)
.++. +.++..+. +..+......++ .+++...++.++...+...........+.+|.|.|++. ++.++.++
T Consensus 270 ---~~~~--~~~~~~~~-~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A 343 (539)
T PF03137_consen 270 ---EEDS--DKDSFKDP-KSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQA 343 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---hhhh--hhhccccc-ccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH
Confidence 0000 00000000 000000111222 22233344457777777777777888999999999987 99999888
Q ss_pred hHHHHHHHH-HHHHHHHHHHHHHhhcC--ChhHHHHhhHHHHHHHHHHHHHHhhcc----------CC--------Cc--
Q 010375 323 LYSSAMTGA-VLASSTLISIATVDKLG--RRALLISGGIQMITCQVIVSIILGLKF----------GP--------NQ-- 379 (512)
Q Consensus 323 ~~~~~~~~~-~~~~~~~~~g~l~d~~~--~r~~~~~~~~~~~~~~~~~~~~~~~~~----------~~--------~~-- 379 (512)
.++.....+ +..+|.+++|++.+|++ .|+......+...++.+.......... .. ..
T Consensus 344 ~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~ 423 (539)
T PF03137_consen 344 SLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNL 423 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCC
Confidence 887766554 66788899999999985 355555544444444433111111000 00 00
Q ss_pred --------------------ccc-cchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHH-HHHH
Q 010375 380 --------------------ELS-KSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNL-FFTF 437 (512)
Q Consensus 380 --------------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~-~g~~ 437 (512)
..+ .......++.+++..+..+....|.. ...-+.+|+++|+.+.|+...+.+ +|.+
T Consensus 424 ~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~-~i~LR~V~~~~rs~AlGv~~~~~rllg~I 502 (539)
T PF03137_consen 424 TCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPST-LITLRCVPPEQRSFALGVQWLIIRLLGFI 502 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchh-eeeeccCChhhcchhhhHHHHHHHhhcCc
Confidence 000 01112233333333444444445553 344588899999999999998765 5778
Q ss_pred HHHHHHHHHHhhc
Q 010375 438 VIAQIFLTLLCSF 450 (512)
Q Consensus 438 ~~~~~~~~~~~~~ 450 (512)
-+|.++|.+.|..
T Consensus 503 PgPIifG~iiD~t 515 (539)
T PF03137_consen 503 PGPIIFGAIIDST 515 (539)
T ss_dssp -------------
T ss_pred chHHHHhHHHhhh
Confidence 9999999999863
|
Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P. |
| >TIGR00880 2_A_01_02 Multidrug resistance protein | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.8e-15 Score=122.30 Aligned_cols=136 Identities=25% Similarity=0.375 Sum_probs=120.3
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCC
Q 010375 89 TSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTH 168 (512)
Q Consensus 89 ~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 168 (512)
.+.+.++..+++++.|++.||+|||+.+..+..+..++.+...+.++++.+.+.+++.|++.+...+....++.|.+|++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 34567888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhc-cCC
Q 010375 169 LRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGIL-LPE 226 (512)
Q Consensus 169 ~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~-~~e 226 (512)
+|++..++......+|..+++.+ .....+..+|++.+++.++..++..+..++ .||
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 84 ERGVALGLMSAGIALGPLLGPPL--GGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhHHHHHHHHhHHHHHHHhHHh--HHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 99999999999999999999999 455556678999999988887776665554 454
|
|
| >KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.5e-14 Score=136.16 Aligned_cols=318 Identities=13% Similarity=0.135 Sum_probs=205.6
Q ss_pred HHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhh--hhhccchhhhhhhhcCCCC
Q 010375 91 SLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVG--IGFGNQAVPLYLSEMAPTH 168 (512)
Q Consensus 91 ~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~--~~~~~~~~~~~i~~~~~~~ 168 (512)
...+...+.++..|.++||+|||..+....+...+..+...+.. +| +++ +.|+. .+.......++++|....+
T Consensus 70 ~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~~-~~~---~~~l~g~~~~~~s~~~a~vadis~~~ 144 (463)
T KOG2816|consen 70 TAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-YW-FFL---LLGLSGGFSAIFSVGFAYVADISSEE 144 (463)
T ss_pred hhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-HH-Hhh---hcccccchhhhhhhhhhheeeccchh
Confidence 34677789999999999999999999999998888888877766 33 333 34432 2345667888999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhh-ccCCChhHHHHcCCHHHHHHHHHHH
Q 010375 169 LRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGI-LLPETPNSLIERGKKVEGRRVLEKI 247 (512)
Q Consensus 169 ~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~-~~~e~p~~l~~~~~~~~~~~~~~~~ 247 (512)
+|....++.......+..++|.+ +....+..+.-.+|.+..+..++..+... ++||+-... .+.+ ......
T Consensus 145 ~R~~~~gll~~~~~~~~~~~p~~--~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~---~~~~---~~~~~~ 216 (463)
T KOG2816|consen 145 ERSSSIGLLSGTFGAGLVIGPAL--GGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEK---ERSD---ATLREL 216 (463)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHH--HHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcc---cccc---cccccc
Confidence 99999999999999999999999 45544556777888888888887776655 488874211 0100 000000
Q ss_pred cCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHh-cCCCCchhhHHH
Q 010375 248 RGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS-MGFKGDASLYSS 326 (512)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~ 326 (512)
.... .........++...+....+..+.......+..........-..+++++. ++++..+.+...
T Consensus 217 ~~~~-------------~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~ 283 (463)
T KOG2816|consen 217 TPGS-------------LDSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLL 283 (463)
T ss_pred CCCc-------------ccchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHH
Confidence 0000 00000011112222211222222222222222211111111011233333 899999999888
Q ss_pred HHHHHHHHHHHHHHH-HHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhccc
Q 010375 327 AMTGAVLASSTLISI-ATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWG 405 (512)
Q Consensus 327 ~~~~~~~~~~~~~~g-~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (512)
+..+....++.++.. .+...++.|+....|.....+......+... .|.......+.. ... ...
T Consensus 284 ~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~-------------~w~~~~~~v~~~-~~~-~~~ 348 (463)
T KOG2816|consen 284 SLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATE-------------TWMMFAAGVVVA-LAG-IVF 348 (463)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhcc-------------chhhhHHHHHHH-hhc-chh
Confidence 999999999888777 6777889888888888777777777766531 233222222222 222 333
Q ss_pred ceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 010375 406 PLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCS 449 (512)
Q Consensus 406 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~ 449 (512)
+...+..+...+++.+|++.++......+...++|.+.+.+...
T Consensus 349 pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~ 392 (463)
T KOG2816|consen 349 PAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFAL 392 (463)
T ss_pred HHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHH
Confidence 44467777888999999999999999999999999999888654
|
|
| >PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.7e-12 Score=115.80 Aligned_cols=234 Identities=13% Similarity=0.129 Sum_probs=152.2
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhh
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVP 158 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 158 (512)
|++..|++.+....+...++..++.|.++||+|||+..+..+++.+++++. -.+++++.++++|++.|++.+..+.+..
T Consensus 65 g~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~-k~~~~~~~L~~GRvlgGiaTSLLfS~FE 143 (354)
T PF05631_consen 65 GFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLT-KHSSNYPVLLLGRVLGGIATSLLFSAFE 143 (354)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH-HhccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999999999999999999999864 4668999999999999999999998888
Q ss_pred hhh-hhcCCCCCc----hhHHHHHH-HHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhc-cCCChhHH
Q 010375 159 LYL-SEMAPTHLR----GGLNMMFQ-LATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGIL-LPETPNSL 231 (512)
Q Consensus 159 ~~i-~~~~~~~~r----~~~~~~~~-~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~-~~e~p~~l 231 (512)
+++ .|+-..+.+ +..++... ...++-.+++..++.........|-..+|....+..++..++... -+|.+..
T Consensus 144 sW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~- 222 (354)
T PF05631_consen 144 SWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGD- 222 (354)
T ss_pred HHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCC-
Confidence 864 555332222 22222222 122222333344422222222234477888887777777666544 4554310
Q ss_pred HHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHH
Q 010375 232 IERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVL 311 (512)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (512)
..+..+ ..+..+..++.+.+ .++++.+.....+.....+.....|.|.+
T Consensus 223 --~~~~~~--------------------------~~~~~~~a~~~i~~---d~ril~LG~~qslFE~smy~FVflWtPaL 271 (354)
T PF05631_consen 223 --TSSSSS--------------------------LSGSFREAWRAILS---DPRILLLGLIQSLFEGSMYLFVFLWTPAL 271 (354)
T ss_pred --cccccc--------------------------hHHHHHHHHHHHHc---CchhHHHHHHHHHHHHHHHHheeeeecee
Confidence 000000 00000112223332 23345555666666666777777788877
Q ss_pred HHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhc
Q 010375 312 FQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKL 347 (512)
Q Consensus 312 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 347 (512)
..+ -.....|++++.+.+..++|+.+..++..+.
T Consensus 272 ~~~--~~~~P~GlIFssFM~a~MlGS~lf~~l~s~~ 305 (354)
T PF05631_consen 272 DPD--DEELPLGLIFSSFMVAMMLGSSLFSRLLSKS 305 (354)
T ss_pred cCC--CCCCCchHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 521 1234578899999999999999887665543
|
|
| >PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins | Back alignment and domain information |
|---|
Probab=99.54 E-value=2e-13 Score=132.07 Aligned_cols=378 Identities=13% Similarity=0.117 Sum_probs=219.5
Q ss_pred CCccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhh-----chhHHHHHHHHHHHHHHHHHHhh----chHHHHHHHHHH
Q 010375 75 NNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDY-----GRRASIICGGISFLLGAALNAAA----ANLAMLLTGRIL 145 (512)
Q Consensus 75 ~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~-----Grr~~l~~~~~~~~~~~~~~~~~----~~~~~l~~~r~l 145 (512)
++++|+++++...+.+...+...+- +++|.++|.+ .||+-++++.++..++.+..+.. .+.....+.-++
T Consensus 17 ~~~l~ls~~~~~~~~~~~~lPw~~K-p~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~l 95 (433)
T PF03092_consen 17 KDDLGLSPAQLQRLSSLASLPWSIK-PLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFL 95 (433)
T ss_pred HHHcCCCHHHHHHHHHHHhCchHHh-hhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHH
Confidence 4556999999999998888887665 7889999986 35566677777776666655553 346666777788
Q ss_pred HhhhhhhccchhhhhhhhcCC--CCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhc
Q 010375 146 LGVGIGFGNQAVPLYLSEMAP--THLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGIL 223 (512)
Q Consensus 146 ~G~~~~~~~~~~~~~i~~~~~--~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~ 223 (512)
..+|.+....++-+++.|... +++|+...+.......+|.+++..+ .+...+..++|..|.+.+++..+..+..++
T Consensus 96 a~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l--~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~ 173 (433)
T PF03092_consen 96 ASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLL--SGPLLDSFGPQGVFLISAALPLLMLIVALF 173 (433)
T ss_pred HHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHh--hhhhhhcCCCeEEehHHHHHHHHHHHHHHH
Confidence 899999999999999999984 3347788888888899999999988 556667778999999888777766655555
Q ss_pred c-CCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHH-HHHHHHHHHhhch
Q 010375 224 L-PETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVM-AIFMPMFQILTGI 301 (512)
Q Consensus 224 ~-~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 301 (512)
+ +|.++ ...++... ..++ +.... ....++.....++.++.+..++... ..++..+... ..
T Consensus 174 ~~~e~~~-----~~~~~~~~----~~~~-----~~~~~---~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~-~~ 235 (433)
T PF03092_consen 174 LLEERKV-----RPADEVFS----FGKE-----EVPCL---FGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPS-IS 235 (433)
T ss_pred hhhhccc-----cccchhhc----cccc-----ccchh---hHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccC-CC
Confidence 4 43210 00000000 0000 00000 0000011112233333332221111 1111111100 00
Q ss_pred hH-HHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcc
Q 010375 302 NS-ILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQE 380 (512)
Q Consensus 302 ~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (512)
.. ..++........++++...+....+..++.++|..+..+...+..-|+++....++..+..+.-... ....+..-.
T Consensus 236 ~a~~fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~l-v~~~n~~~G 314 (433)
T PF03092_consen 236 SASSFYFQTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLL-VTRWNLDLG 314 (433)
T ss_pred CccEEEEEeccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEE-EEEEeeeeC
Confidence 11 1111111111123777777777777777778888777777677777777666554433322211111 000000000
Q ss_pred cccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcch--------
Q 010375 381 LSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKF-------- 452 (512)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~-------- 452 (512)
.++ .+..+.--.+........+.|. ..+.+|+.|+..-|+.+++...+.++|..++..+...+.+..+.
T Consensus 315 i~d--~~f~lgd~~l~~~~~~i~~mP~-lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l 391 (433)
T PF03092_consen 315 IPD--QWFALGDTILEEVIGMIAFMPS-LVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNL 391 (433)
T ss_pred cCC--eEEEEEhHHHHHHHHHHHHHHH-HHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccch
Confidence 111 2333333444455555555565 35668999999999999999999999999999999888876651
Q ss_pred hhHHHHHHHHHHHHHHHhhccccCC
Q 010375 453 GIFLFFAGWVTIMTIFVYFFLPETK 477 (512)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (512)
....++..++.+..+.+..++|+.+
T Consensus 392 ~~lili~~~~~ll~l~ll~lLp~~~ 416 (433)
T PF03092_consen 392 WLLILICSVIQLLPLPLLFLLPPQK 416 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 2233333334444455555666544
|
Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus). |
| >PRK15011 sugar efflux transporter B; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.3e-12 Score=126.41 Aligned_cols=146 Identities=14% Similarity=0.151 Sum_probs=122.2
Q ss_pred cccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchh
Q 010375 78 CKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAV 157 (512)
Q Consensus 78 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 157 (512)
+|++..+.+++.+...++..++.+++|+++||+|||+.+..+.....+......+.++.+.+++.+++.+++.+...+..
T Consensus 247 ~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~ 326 (393)
T PRK15011 247 LHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIG 326 (393)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 37788899999888888888999999999999999998887776666655555567788888889999988888777777
Q ss_pred hhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhccCC
Q 010375 158 PLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPE 226 (512)
Q Consensus 158 ~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e 226 (512)
..+..|.+|+ +|++++++++....+|..+++.+ .+...+..+|+..|++.+++.++.++..++.||
T Consensus 327 ~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l--~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 327 MLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSL--AGIVAEIWNYHAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHH--HHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcC
Confidence 7888899875 58999999999999999999999 555666679999999988888888777777765
|
|
| >PRK09528 lacY galactoside permease; Reviewed | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.2e-13 Score=131.92 Aligned_cols=148 Identities=14% Similarity=0.167 Sum_probs=126.1
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhh
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVP 158 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 158 (512)
+.+..+.|++.+...++..++.+++|++.||+|||+.+..+.++.+++.++.+++++.+.+++.+++.|++.+...+...
T Consensus 258 ~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 337 (420)
T PRK09528 258 EQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVF 337 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667889999999999999999999999999999999999999999999999999999999999999999888888888
Q ss_pred hhhhhcCCCCCchhHHHH-HHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhc-cCCCh
Q 010375 159 LYLSEMAPTHLRGGLNMM-FQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGIL-LPETP 228 (512)
Q Consensus 159 ~~i~~~~~~~~r~~~~~~-~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~-~~e~p 228 (512)
.++.|.+|++.|+...+. ++....+|.++++.+ .+...+..|||..|.+.+++.++..++.++ +++++
T Consensus 338 ~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~--~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~~ 407 (420)
T PRK09528 338 KYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTL--AGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGDR 407 (420)
T ss_pred HHHHHHcCccceeeeeeehHHHHHHHHHHHHHHH--HHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 899999999988887655 667788999999999 666667779999999988877666555444 55444
|
|
| >TIGR00895 2A0115 benzoate transport | Back alignment and domain information |
|---|
Probab=99.47 E-value=6.9e-13 Score=128.85 Aligned_cols=176 Identities=15% Similarity=0.139 Sum_probs=128.0
Q ss_pred HHHHHHHHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHH
Q 010375 287 VMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVI 366 (512)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~ 366 (512)
+....+..+...........+.|.+.+++|.+..+.++......++.+++.++.|+++||+|||+.+..+..+..++..+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~ 98 (398)
T TIGR00895 19 IILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLL 98 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 33333344444444556677788888889999999999999999999999999999999999999998888777766655
Q ss_pred HHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 010375 367 VSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTL 446 (512)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~ 446 (512)
.... +..+..++...+.+.+.+.. .+....++.|.+|++.|+++.++......+|..+++.+.+.+
T Consensus 99 ~~~~-------------~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 164 (398)
T TIGR00895 99 CALA-------------TNVTQLLILRFLAGLGLGGL-MPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWL 164 (398)
T ss_pred HHHc-------------cchHHHHHHHHHHhcccccc-hhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHH
Confidence 5432 11233344444444444433 344467888999999999999999999999999999999999
Q ss_pred HhhcchhhHHHHH-HHHHHHHHHHhhccccC
Q 010375 447 LCSFKFGIFLFFA-GWVTIMTIFVYFFLPET 476 (512)
Q Consensus 447 ~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~ 476 (512)
.+..++...+.+. .+..+...+...++|++
T Consensus 165 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (398)
T TIGR00895 165 IPVFGWRSLFYVGGIAPLLLLLLLMRFLPES 195 (398)
T ss_pred hhcccceeehhhhhhHHHHHHHHHHHhCCCC
Confidence 8888876555554 34444444455556654
|
|
| >TIGR00890 2A0111 Oxalate/Formate Antiporter | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.6e-12 Score=125.25 Aligned_cols=138 Identities=14% Similarity=0.028 Sum_probs=119.5
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchH--HHHHHHHHHHhhhhhhccch
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANL--AMLLTGRILLGVGIGFGNQA 156 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~--~~l~~~r~l~G~~~~~~~~~ 156 (512)
+.+..+.+++.+.+.++..++.++.|+++||+|||+.+..+..+..++.++..+.++. ..++...++.|++.+...+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 315 (377)
T TIGR00890 236 GLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISL 315 (377)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhc
Confidence 6688889999999999999999999999999999999999999998888887777643 33456678889888888888
Q ss_pred hhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHH
Q 010375 157 VPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMT 218 (512)
Q Consensus 157 ~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~ 218 (512)
...++.|.+|+++|+++.++......+|..++|.+ .+...+..||++.|.+.++.+++.+
T Consensus 316 ~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~--~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 316 FPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLI--ASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred cHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHH--HHHHHhhhchhhHHHHHHHHHHHhc
Confidence 88899999999999999999999999999999999 5566667799999998887776654
|
|
| >TIGR00891 2A0112 putative sialic acid transporter | Back alignment and domain information |
|---|
Probab=99.45 E-value=4.5e-12 Score=123.49 Aligned_cols=180 Identities=11% Similarity=0.076 Sum_probs=132.0
Q ss_pred hHHHHHHHHHHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHH
Q 010375 284 PQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITC 363 (512)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~ 363 (512)
++.+....+..+.............|.+.+++|.+..+.++..+...++..++.++.|+++||+|||+.+..+.++..++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~ 90 (405)
T TIGR00891 11 WNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAG 90 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 34445555555555556666777788888889999999999999999999999999999999999999999888777776
Q ss_pred HHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHH
Q 010375 364 QVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIF 443 (512)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~ 443 (512)
.++..... +.+..+....+.+.+.+... +....++.|.+|+++|+++.++.+....+|..+++.+.
T Consensus 91 ~~~~~~~~-------------~~~~l~~~~~l~G~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~ 156 (405)
T TIGR00891 91 TLACGFAP-------------GYITMFIARLVIGIGMGGEY-GSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVY 156 (405)
T ss_pred HHHHHHhc-------------cHHHHHHHHHHHHhhhhhhh-HHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 66554431 12333444455555544333 33356778999999999999999999999999999999
Q ss_pred HHHHhhcc--hhhHHHHHHHHHHHHHHHhhccccCC
Q 010375 444 LTLLCSFK--FGIFLFFAGWVTIMTIFVYFFLPETK 477 (512)
Q Consensus 444 ~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (512)
+.+.+..+ +...+.+.++..+..++.....||++
T Consensus 157 ~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~ 192 (405)
T TIGR00891 157 SLVVPVWGDGWRALFFISILPIIFALWLRKNIPEAE 192 (405)
T ss_pred HHHHHhcCccHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 98887765 65555555554444444445556543
|
|
| >cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.5e-12 Score=122.62 Aligned_cols=145 Identities=28% Similarity=0.366 Sum_probs=133.8
Q ss_pred cccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhH-HHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccch
Q 010375 78 CKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRA-SIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQA 156 (512)
Q Consensus 78 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~-~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 156 (512)
+|.++.+.+++.+...++..++.++.+++.||+|||+ .+..+..+..++.+...+.++.+.+++..++.|++.+...+.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 285 (352)
T cd06174 206 LGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPA 285 (352)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchh
Confidence 3678999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred hhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhcc
Q 010375 157 VPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILL 224 (512)
Q Consensus 157 ~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~ 224 (512)
...++.|..|+++|++.+++......+|..+++.+ .+...+..+|++.+++.+++.++..+..+++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i--~g~l~~~~~~~~~~~~~~~~~~i~~i~~~~~ 351 (352)
T cd06174 286 LLTLASELAPPEARGTASGLFNTFGSLGGALGPLL--AGLLLDTGGYGGVFLILAALALLAALLLLLL 351 (352)
T ss_pred HHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhcccCcchHHHHHHHHHHHHHHHheec
Confidence 99999999999999999999999999999999999 5666667799999999999988877766544
|
MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3 |
| >TIGR00889 2A0110 nucleoside transporter | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.2e-12 Score=127.04 Aligned_cols=146 Identities=13% Similarity=0.232 Sum_probs=121.9
Q ss_pred CcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhc----hHHHHHHHHHHHhhhhhhccch
Q 010375 81 DNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAA----NLAMLLTGRILLGVGIGFGNQA 156 (512)
Q Consensus 81 s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~----~~~~l~~~r~l~G~~~~~~~~~ 156 (512)
+..+.+.+.+...++..++.++.|+++||+|||+++..+.++.+++..+..... +++.+++.+++.|++.+...+.
T Consensus 249 ~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~ 328 (418)
T TIGR00889 249 VVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNIS 328 (418)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 457789999999999999999999999999999999999999988877776632 2466778899999999988888
Q ss_pred hhhhhhhcCCCCCchhHHHHHH-HHHHHHHHHHHHHHHhhcccCC------CchhHHHHhhHHHHHHHHHHhhc-cCCCh
Q 010375 157 VPLYLSEMAPTHLRGGLNMMFQ-LATTLGIFTANMINYGTQKLET------WGWRLSLGLAAAPALMMTVGGIL-LPETP 228 (512)
Q Consensus 157 ~~~~i~~~~~~~~r~~~~~~~~-~~~~lG~~~~~~~~~~~~~~~~------~~Wr~~f~~~~~~~~~~~~~~~~-~~e~p 228 (512)
...++.|++|+++|++++++.+ ...++|.++||+++. ...+. .|||..|.+.++..++..++.++ +||+.
T Consensus 329 ~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G--~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~ 406 (418)
T TIGR00889 329 GSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSG--VMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSH 406 (418)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHH--HHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 8999999999999999999997 678899999999953 33332 57999999888887776665544 67663
|
This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli. |
| >TIGR01299 synapt_SV2 synaptic vesicle protein SV2 | Back alignment and domain information |
|---|
Probab=99.43 E-value=1e-11 Score=126.46 Aligned_cols=161 Identities=14% Similarity=0.122 Sum_probs=122.4
Q ss_pred hHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCccc
Q 010375 302 NSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQEL 381 (512)
Q Consensus 302 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (512)
..+....|.+.+++|.+..+.+++.+...++.+++.++.|+++||+|||+.++++.++..++.++..+..
T Consensus 184 ~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~---------- 253 (742)
T TIGR01299 184 FVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQ---------- 253 (742)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHh----------
Confidence 4456677888788999999999999999999999999999999999999999988877776666555431
Q ss_pred ccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc-----------
Q 010375 382 SKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSF----------- 450 (512)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~----------- 450 (512)
..+.+++.-++.+++.+... +....++.|.+|++.|+...++...+..+|.++++.+...+....
T Consensus 254 ---s~~~llv~R~l~G~g~g~~~-p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~ 329 (742)
T TIGR01299 254 ---GYGFFLFCRLLSGFGIGGAI-PIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQ 329 (742)
T ss_pred ---hHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccc
Confidence 13344455555566555443 555788899999999999999999999999999998776666543
Q ss_pred --chhhHHHHHHHHHHHHHHHhhccccC
Q 010375 451 --KFGIFLFFAGWVTIMTIFVYFFLPET 476 (512)
Q Consensus 451 --g~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (512)
+|..++.+.++..++.++..+++||.
T Consensus 330 ~~gWR~l~~i~~lp~ll~ll~~~~lPES 357 (742)
T TIGR01299 330 FHSWRVFVIVCAFPCVFAIGALTFMPES 357 (742)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 24455555555666666666778876
|
This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices. |
| >PRK05122 major facilitator superfamily transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.3e-12 Score=124.07 Aligned_cols=142 Identities=20% Similarity=0.117 Sum_probs=122.7
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhhhhh
Q 010375 84 GLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSE 163 (512)
Q Consensus 84 ~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 163 (512)
+.++..+.+.++..++.++.|++.||+|||+.+..+..+.+++.++..+.++.+.+++.+++.|++.+...+.....+.|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~ 329 (399)
T PRK05122 250 GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVK 329 (399)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 45667778889999999999999999999999999998888888888888888888899999999999888888888889
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhccCCC
Q 010375 164 MAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPET 227 (512)
Q Consensus 164 ~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~ 227 (512)
.+|+++|+++.+++.....+|..+++.+ .+...+..||++.|++.++..++..+..+++++.
T Consensus 330 ~~~~~~~g~~~g~~~~~~~~g~~~~~~~--~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 330 RVPPQNRGAALGAYSVFLDLSLGITGPL--AGLVASWFGYPSIFLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999998888 4555566789999999888888777666665444
|
|
| >TIGR02332 HpaX 4-hydroxyphenylacetate permease | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.4e-11 Score=119.59 Aligned_cols=181 Identities=11% Similarity=0.068 Sum_probs=132.4
Q ss_pred hHHHHHHHHHHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHH
Q 010375 284 PQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITC 363 (512)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~ 363 (512)
++.....++.+++...-.....+..|.+.+++|++..+.++..+...++..++.+..|++.||+|||+.+..+.++..++
T Consensus 7 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~ 86 (412)
T TIGR02332 7 RRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIA 86 (412)
T ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHH
Confidence 33445555555555555566677778777889999999999999999999999999999999999999998888887777
Q ss_pred HHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHH
Q 010375 364 QVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIF 443 (512)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~ 443 (512)
..+..+. ++.+..+..-.+.+.+.+.. .+....++.|.+|+++|+++.++.+....+|..+++.+.
T Consensus 87 ~~~~~~~-------------~~~~~l~~~r~l~G~~~~~~-~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~ 152 (412)
T TIGR02332 87 STATMFA-------------TGPESLYLLRILVGIAEAGF-LPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILS 152 (412)
T ss_pred HHHHHHh-------------cCHHHHHHHHHHHHHHHhhH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7766553 11233444445555555533 344456778999999999999999999999999999999
Q ss_pred HHHHhh------cchhhHHHHHHHH-HHHHHHHhhccccCCC
Q 010375 444 LTLLCS------FKFGIFLFFAGWV-TIMTIFVYFFLPETKG 478 (512)
Q Consensus 444 ~~~~~~------~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 478 (512)
+.+.+. .+|...+.+.++. ++...+.++++||+++
T Consensus 153 ~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 153 GYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred HHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 988752 4666655554443 3444455566677653
|
This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially. |
| >COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.42 E-value=8.7e-13 Score=120.29 Aligned_cols=182 Identities=15% Similarity=0.152 Sum_probs=148.3
Q ss_pred chhHHHHHHHHHHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHH
Q 010375 282 NRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMI 361 (512)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~ 361 (512)
.+.+.++...+.+......--.+..-.|.+.++.++|..+.+.+.+...+..-++.++.|.++||.+.|+.+..+.++.+
T Consensus 26 ~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsa 105 (448)
T COG2271 26 WRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSA 105 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHH
Confidence 34445666666666665566667778899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHH
Q 010375 362 TCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQ 441 (512)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~ 441 (512)
+..+++.+.. ..+...++..+-+.+.+.++.|.. ..+..-+|+++||+..++-++..++|+.+.|+
T Consensus 106 i~nil~Gfs~-------------s~~~~~~l~~lng~fQg~Gwpp~~-~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~ 171 (448)
T COG2271 106 IVNILFGFSP-------------SLFLFAVLWVLNGWFQGMGWPPCA-RTITHWFSRKERGTWWSIWNTSHNIGGALAPL 171 (448)
T ss_pred HHHHHHhhhh-------------HHHHHHHHHHHHHHHhcCCCcHHH-HHHHHHcCccccCceEEEehhhhhcccchHHH
Confidence 9988888753 356677778888888888888875 55579999999999999999999999999999
Q ss_pred HH--HHHHhhcchhhHHHHHHH-HHHHHHHHhhccccCC
Q 010375 442 IF--LTLLCSFKFGIFLFFAGW-VTIMTIFVYFFLPETK 477 (512)
Q Consensus 442 ~~--~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~ 477 (512)
+. +.+.++.++...+++.++ .+++++++++..+++.
T Consensus 172 ~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~P 210 (448)
T COG2271 172 VALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRP 210 (448)
T ss_pred HHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 99 888888887666666554 4555666666666544
|
|
| >PRK12382 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=3.6e-12 Score=123.43 Aligned_cols=138 Identities=14% Similarity=0.086 Sum_probs=120.8
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhhhhh
Q 010375 84 GLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSE 163 (512)
Q Consensus 84 ~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 163 (512)
+.++..+.+.++..+++++.|++.||+|||+.+..+..+.+++.++..+.++.+.+++.+++.|++.+...+...+.+.|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~ 329 (392)
T PRK12382 250 MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVK 329 (392)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 34566777888889999999999999999999999999999988888888888888889999999999888888888999
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhc
Q 010375 164 MAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGIL 223 (512)
Q Consensus 164 ~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~ 223 (512)
.+|+++|+++.++.+....+|..++|.+ .+...+..||+..|.+.++..++..++.++
T Consensus 330 ~~~~~~~g~~~g~~~~~~~~g~~ig~~~--~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 330 RVPSQVRGTALGGYAAFQDIAYGVSGPL--AGMLATSFGYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHhCchHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999 566667779999999988888777665544
|
|
| >PRK11663 regulatory protein UhpC; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=4.3e-12 Score=124.33 Aligned_cols=176 Identities=12% Similarity=0.166 Sum_probs=127.7
Q ss_pred HHHHHHHHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHH
Q 010375 287 VMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVI 366 (512)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~ 366 (512)
+...++..+........+..+.|.+.+++|++..+.++..+...++..+++++.|++.||+|+|+.+..+.++..++.++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~ 104 (434)
T PRK11663 25 LITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINIL 104 (434)
T ss_pred HHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHH
Confidence 33344444444434445677889998999999999999999999999999999999999999999998888887777665
Q ss_pred HHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 010375 367 VSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTL 446 (512)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~ 446 (512)
..... +.+.......+.+.+.+..+ +....++.|.+|+++|++++++.+....+|..++|.+.+.+
T Consensus 105 ~~~~~-------------~~~~l~~~~~l~g~~~g~~~-~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l 170 (434)
T PRK11663 105 FGFSS-------------SLWAFALLWVLNAFFQGWGW-PVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAI 170 (434)
T ss_pred HHHHh-------------HHHHHHHHHHHHHHHHHccc-hHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55431 12233333334444444443 33356778999999999999999999999999999999999
Q ss_pred HhhcchhhHHHHHHHH-HHHHHHHhhccccC
Q 010375 447 LCSFKFGIFLFFAGWV-TIMTIFVYFFLPET 476 (512)
Q Consensus 447 ~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~ 476 (512)
.+..++...+...++. .+..++..+.++++
T Consensus 171 ~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~ 201 (434)
T PRK11663 171 ALHYGWRYGMMIAGIIAIVVGLFLCWRLRDK 201 (434)
T ss_pred HHcccHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9888887666555443 33333444445543
|
|
| >PRK10054 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=1e-11 Score=119.97 Aligned_cols=173 Identities=10% Similarity=0.117 Sum_probs=119.6
Q ss_pred HHHHHHHHHhhchhHHHhhHHHHHH-hcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHH
Q 010375 289 AIFMPMFQILTGINSILFYAPVLFQ-SMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIV 367 (512)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~ 367 (512)
.+.+..++...+......+.|.+++ ++|++..+.++..+...+..+++++..|+++||+|||+.+..+.++..++.+.+
T Consensus 11 ~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~ 90 (395)
T PRK10054 11 ALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAI 90 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHH
Confidence 3334444445555666666666654 589999999999999999999999999999999999999988887776666555
Q ss_pred HHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010375 368 SIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLL 447 (512)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~ 447 (512)
.+.. ..+..+....+.+...+ ...+....+..|..|+++|+++.|+.+...++|..++|.+.+.+.
T Consensus 91 ~~~~-------------~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~ 156 (395)
T PRK10054 91 PLVN-------------NVTLVVLFFALINCAYS-VFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLV 156 (395)
T ss_pred HHHh-------------HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4431 12222333333333333 233444567789999999999999999999999999999999887
Q ss_pred hhcchhhHHHHHHHHHHHHH-HHhhccccC
Q 010375 448 CSFKFGIFLFFAGWVTIMTI-FVYFFLPET 476 (512)
Q Consensus 448 ~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~ 476 (512)
+ .++...+...+++.++.+ ...+.+++.
T Consensus 157 ~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~ 185 (395)
T PRK10054 157 M-QSINLPFWLAAICSAFPLVFIQIWVQRS 185 (395)
T ss_pred H-hccCcHHHHHHHHHHHHHHHHHHHHhcc
Confidence 5 565555555444444433 333444443
|
|
| >PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX) | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.6e-11 Score=112.67 Aligned_cols=343 Identities=11% Similarity=0.053 Sum_probs=212.2
Q ss_pred cccCcchhH-HHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccch
Q 010375 78 CKYDNQGLA-AFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQA 156 (512)
Q Consensus 78 ~~~s~~~~g-~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 156 (512)
.|++..|+. -+.-...-.+....++...+.|..|.|++++++.+...+...+.-+.++...+-+..++-|++.+. ..+
T Consensus 35 kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~a~-eva 113 (412)
T PF01770_consen 35 KNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLATAA-EVA 113 (412)
T ss_pred cCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHH-HHH
Confidence 577887765 566677778888999999999999999999999999999999999999999999999999998876 567
Q ss_pred hhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhccCCChhHHHHcCC
Q 010375 157 VPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGK 236 (512)
Q Consensus 157 ~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~ 236 (512)
-++++--..++++-.++.+...++..+|..++..++.........+.+..+++......+++++.+++|..++...-+++
T Consensus 114 y~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~~~S~~f~r~ 193 (412)
T PF01770_consen 114 YYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMPKRSLFFHRK 193 (412)
T ss_pred HHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCCCcccceecc
Confidence 88899888899888999999999999998888888665555566778888888777777777777888876653322222
Q ss_pred HHHHHHHHHHHcCCchhhH-HHH-HH-HHHHHhhccc-------CcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHh
Q 010375 237 KVEGRRVLEKIRGTKEVNA-EYQ-DM-VDASELANSI-------KHPFRNILERRNRPQLVMAIFMPMFQILTGINSILF 306 (512)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~-~~~-~~-~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (512)
.++..+ ..+...++..+. +.. +. ++........ ...+++..+++. ++...+-+....+++.....
T Consensus 194 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~----ll~WSlWWa~atcgy~qv~n 268 (412)
T PF01770_consen 194 PPAEQD-ANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPR----LLLWSLWWAFATCGYYQVIN 268 (412)
T ss_pred Cccccc-cccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCch----HHHHHHHHHHHHhHHHHHHH
Confidence 111100 000000000000 000 00 0000000000 111222222222 33333444444556677777
Q ss_pred hHHHHHHhc---CCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCccccc
Q 010375 307 YAPVLFQSM---GFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSK 383 (512)
Q Consensus 307 ~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (512)
|...+.++. +-+..-.|..-+...+.+.++.+..|++..++.+...+.++......+..++.... .
T Consensus 269 YvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~-----------t 337 (412)
T PF01770_consen 269 YVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSF-----------T 337 (412)
T ss_pred HHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHH-----------h
Confidence 777777665 33334457778888888888889999986666665444444333322222222221 1
Q ss_pred chhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHH
Q 010375 384 SFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFV 438 (512)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~ 438 (512)
.+.|......+++...+....... ...++.....+.-+...|+.++...+-..+
T Consensus 338 ~~Iwv~Y~~yIif~~~y~fliTiA-~~qIA~~l~~e~yaLVFGiNtf~Al~LQti 391 (412)
T PF01770_consen 338 GNIWVCYAGYIIFRSLYMFLITIA-SFQIAKNLSEERYALVFGINTFVALVLQTI 391 (412)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhccccceeeeeeeHHHHHHHHHHh
Confidence 335555666666666555433222 233334444556666677766665554433
|
Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane |
| >TIGR00899 2A0120 sugar efflux transporter | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.3e-11 Score=118.97 Aligned_cols=145 Identities=15% Similarity=0.183 Sum_probs=122.5
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhh
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVP 158 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 158 (512)
|.++.+.+++.+.......++.++.|++.||+|||+++..+.++..+......+.++.+.+++.+++.|++.+...+...
T Consensus 231 g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 310 (375)
T TIGR00899 231 GLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGM 310 (375)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77888999988888888888999999999999999999888777666666666778888888899999999988888888
Q ss_pred hhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhccCC
Q 010375 159 LYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPE 226 (512)
Q Consensus 159 ~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e 226 (512)
.++.|..|+ +|+++++++.....+|..++|.+ .+...+..||+..|++.++..++..++..+++|
T Consensus 311 ~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~--~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 375 (375)
T TIGR00899 311 LYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSV--GGILAERWSYHAVYWFAIVMLIVALFCLLLIKD 375 (375)
T ss_pred HHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHH--HHHHHHhccchhHHHHHHHHHHHHHHHHheecC
Confidence 889998875 56799999999999999999999 555556678999999998888887777666654
|
This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria. |
| >TIGR00893 2A0114 d-galactonate transporter | Back alignment and domain information |
|---|
Probab=99.40 E-value=4.8e-12 Score=122.83 Aligned_cols=162 Identities=15% Similarity=0.108 Sum_probs=122.9
Q ss_pred hHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCccc
Q 010375 302 NSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQEL 381 (512)
Q Consensus 302 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (512)
..+....|.+.+++|.+..+.++..+...++..++.++.|+++||+|||+.+..+.++..++..+.....
T Consensus 11 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~---------- 80 (399)
T TIGR00893 11 ANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAG---------- 80 (399)
T ss_pred HhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHc----------
Confidence 4555667777788999999999999999999999999999999999999999888877777666655431
Q ss_pred ccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHH
Q 010375 382 SKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGW 461 (512)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~ 461 (512)
+.+.......+.+.+.+.. .+....++.|.+|+++|+++.++.+....+|..+++.+.+.+.+..++...+...++
T Consensus 81 ---~~~~~~~~~~l~g~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~ 156 (399)
T TIGR00893 81 ---AYVSLYILRVLLGAAEAPF-FPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGV 156 (399)
T ss_pred ---CHHHHHHHHHHHHHHHHhh-hhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHH
Confidence 2344455555555555533 344467888999999999999999999999999999999998888887766655544
Q ss_pred HHHH-HHHHhhccccCC
Q 010375 462 VTIM-TIFVYFFLPETK 477 (512)
Q Consensus 462 ~~~~-~~~~~~~~~~~~ 477 (512)
..+. .++..+..++++
T Consensus 157 ~~~~~~~~~~~~~~~~~ 173 (399)
T TIGR00893 157 LGIIWGVLWLKFIPDPP 173 (399)
T ss_pred HHHHHHHHhhheecCCC
Confidence 4333 333444455443
|
|
| >PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.2e-11 Score=120.39 Aligned_cols=146 Identities=16% Similarity=0.141 Sum_probs=121.8
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhh
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVP 158 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 158 (512)
|.+..+.+.+.+.+.++..++.++.|+++||+|||+.+..+.+...++.++..+.++.+.+.+.-++.|++.++..+...
T Consensus 251 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 330 (406)
T PRK11551 251 GLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLY 330 (406)
T ss_pred CCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHH
Confidence 77899999999999999999999999999999999999887777777777777778888888888889998888888889
Q ss_pred hhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCC-CchhHHHHhhHHHHHHHHHHhhccCC
Q 010375 159 LYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLET-WGWRLSLGLAAAPALMMTVGGILLPE 226 (512)
Q Consensus 159 ~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~-~~Wr~~f~~~~~~~~~~~~~~~~~~e 226 (512)
+++.|.+|+++|++.+++......+|..++|.+ .+...+. .+|...++......++..++.+++.+
T Consensus 331 ~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (406)
T PRK11551 331 ALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLL--AGQLLALGRSTVGVIGASIPVILVAALAALLLVS 397 (406)
T ss_pred HHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhh--HhhhhccCCchHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999 4554444 35666676666666665555555433
|
|
| >TIGR00892 2A0113 monocarboxylate transporter 1 | Back alignment and domain information |
|---|
Probab=99.37 E-value=8.1e-12 Score=122.89 Aligned_cols=140 Identities=9% Similarity=0.022 Sum_probs=116.2
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhh--hchhHHHHH--HHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhcc
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRD--YGRRASIIC--GGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGN 154 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr--~Grr~~l~~--~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 154 (512)
|.+..+.+++.+...++..++.++.|+++|| +++|+...+ +.++.+++.+++.+.++++.+++.+++.|++.+...
T Consensus 272 g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~ 351 (455)
T TIGR00892 272 GVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVG 351 (455)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHH
Confidence 7799999999999999999999999999998 344443333 344445555666778899999999999999999998
Q ss_pred chhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCC-chhHHHHhhHHHHHHHHHH
Q 010375 155 QAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETW-GWRLSLGLAAAPALMMTVG 220 (512)
Q Consensus 155 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~-~Wr~~f~~~~~~~~~~~~~ 220 (512)
+...+++.|.+|++++++.+++++....+|.++||.+ .+...+.. +|++.|++.++..++..+.
T Consensus 352 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i--~G~l~~~~g~~~~~f~~~~~~~li~~~~ 416 (455)
T TIGR00892 352 ALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPL--AGRLVDATKNYKYIFYASGSIVVSAGLF 416 (455)
T ss_pred HHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccc--eeeeehhcCCcchHHHHhhHHHHHHHHH
Confidence 9999999999999999999999999999999999999 66666655 5999999988877665543
|
|
| >PRK15462 dipeptide/tripeptide permease D; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.6e-11 Score=117.65 Aligned_cols=173 Identities=9% Similarity=0.124 Sum_probs=124.3
Q ss_pred HHHHHHHHHHHhhchhHHHhhHHHHHHh-cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhc-CChhHHHHhhHHHHHHH
Q 010375 287 VMAIFMPMFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKL-GRRALLISGGIQMITCQ 364 (512)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~r~~~~~~~~~~~~~~ 364 (512)
++..+.........++.+..++|.++.+ +|++..+++...........++.+++|+++||+ |||+.+.++.++..++.
T Consensus 11 l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~ 90 (493)
T PRK15462 11 IYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGH 90 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHH
Confidence 3334444444555667788888888765 899999999999999999999999999999999 99999999988887776
Q ss_pred HHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChh--hhhhHHHHHHHHHHHHHHHHHHH
Q 010375 365 VIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLE--TRSAGQSITVAVNLFFTFVIAQI 442 (512)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~g~~~~~~~~g~~~~~~~ 442 (512)
+++.... .........+.+...+.+. ..+...++++|.+|++ .|.++.++.+...++|+.++|.+
T Consensus 91 lll~~~~------------~~~~~~~l~l~li~iG~G~-~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l 157 (493)
T PRK15462 91 VVLGASE------------IHPSFLYLSLAIIVCGYGL-FKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIA 157 (493)
T ss_pred HHHHHhh------------cchhHHHHHHHHHHHhccc-ccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHH
Confidence 6543210 0111122222233333332 2343356788999875 69999999999999999999999
Q ss_pred HHHHHhhcchhhHHHHHHHHHHHHHHHhhc
Q 010375 443 FLTLLCSFKFGIFLFFAGWVTIMTIFVYFF 472 (512)
Q Consensus 443 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 472 (512)
.+++.+..|+...+..+++..+.+++.+..
T Consensus 158 ~g~L~~~~Gw~~~F~iaaigm~l~li~~~~ 187 (493)
T PRK15462 158 CGYAQEEYSWAMGFGLAAVGMIAGLVIFLC 187 (493)
T ss_pred HHHHHhhhChHHHHHHHHHHHHHHHHHHHH
Confidence 999998888877666666555555554443
|
|
| >TIGR00902 2A0127 phenyl proprionate permease family protein | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.9e-11 Score=115.53 Aligned_cols=141 Identities=13% Similarity=0.022 Sum_probs=125.1
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhh
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVP 158 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 158 (512)
|.+..+.|.+.+...++..++.++.+++.||+|+|+.+.++.++..+..++.+++++.+.+++.++++|++.+...+...
T Consensus 236 g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~ 315 (382)
T TIGR00902 236 GISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAM 315 (382)
T ss_pred CCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCCCchhHHHHHH-HHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhc
Q 010375 159 LYLSEMAPTHLRGGLNMMFQ-LATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGIL 223 (512)
Q Consensus 159 ~~i~~~~~~~~r~~~~~~~~-~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~ 223 (512)
.++.+. |+++|++..++++ ...++|..+++.+ ++...+..|+ ..|++.++++++..++...
T Consensus 316 ~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~--~G~l~~~~g~-~~~~~~~~~~~~~~~~~~~ 377 (382)
T TIGR00902 316 RYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAF--AGFIYPTLGA-GTFVFMAIIAAAAFFLIPK 377 (382)
T ss_pred HHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhccH-HHHHHHHHHHHHHHHHHHh
Confidence 999998 9999999999986 5778999999999 6666677776 6677777777766555443
|
This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules. |
| >TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.6e-11 Score=117.29 Aligned_cols=165 Identities=17% Similarity=0.179 Sum_probs=121.5
Q ss_pred hchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCC
Q 010375 299 TGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPN 378 (512)
Q Consensus 299 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (512)
..........|.+.+++|.+..+.++..+...++..++.++.|++.||+|||+.+..+..+..++.......
T Consensus 19 ~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~-------- 90 (385)
T TIGR00710 19 LGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALS-------- 90 (385)
T ss_pred HHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH--------
Confidence 344455556788888899999999999999999999999999999999999999998887777776665543
Q ss_pred cccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHH
Q 010375 379 QELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFF 458 (512)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~ 458 (512)
+..+......++.+.+.+... +....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..++...+.+
T Consensus 91 -----~~~~~~~~~~~l~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~ 164 (385)
T TIGR00710 91 -----NNIETLLVLRFVQAFGASAGS-VISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAF 164 (385)
T ss_pred -----ccHHHHHHHHHHHHcchhHHH-HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 112333344444444444332 33457778999999999999999999999999999999999888887665554
Q ss_pred HHHH-HHHHHHHhhccccCC
Q 010375 459 AGWV-TIMTIFVYFFLPETK 477 (512)
Q Consensus 459 ~~~~-~~~~~~~~~~~~~~~ 477 (512)
.++. .+..+...+..||++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~ 184 (385)
T TIGR00710 165 LSLAGILLSALIFFILPETL 184 (385)
T ss_pred HHHHHHHHHHHHHHhCCCCC
Confidence 4443 333344444555544
|
This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033. |
| >TIGR00900 2A0121 H+ Antiporter protein | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.2e-11 Score=118.59 Aligned_cols=164 Identities=12% Similarity=0.087 Sum_probs=122.0
Q ss_pred hchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCC
Q 010375 299 TGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPN 378 (512)
Q Consensus 299 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (512)
..........|.+..+.+.++.+.++..+...++.+++.++.|+++||+|||+.+..+..+..++..+.......
T Consensus 13 ~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~----- 87 (365)
T TIGR00900 13 IGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALL----- 87 (365)
T ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHc-----
Confidence 344556666788888889999999999999999999999999999999999999998887776666655544210
Q ss_pred cccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHH
Q 010375 379 QELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFF 458 (512)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~ 458 (512)
...+.+.......+.+.+.+.. .+...+++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..++...+.+
T Consensus 88 ---~~~~~~~~~~~~~l~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~ 163 (365)
T TIGR00900 88 ---GGLNIWQVYVLAGILAIAQAFF-TPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWV 163 (365)
T ss_pred ---CCCcHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 0012344444455555555433 344467888999999999999999999999999999999999988887766655
Q ss_pred HHHHHHHHHHHhh
Q 010375 459 AGWVTIMTIFVYF 471 (512)
Q Consensus 459 ~~~~~~~~~~~~~ 471 (512)
.++..+...+...
T Consensus 164 ~~~~~~~~~~~~~ 176 (365)
T TIGR00900 164 DAVGFAISALLIV 176 (365)
T ss_pred HHHHHHHHHHHHH
Confidence 5554444444333
|
|
| >PRK10213 nepI ribonucleoside transporter; Reviewed | Back alignment and domain information |
|---|
Probab=99.34 E-value=6.1e-11 Score=114.49 Aligned_cols=148 Identities=15% Similarity=0.077 Sum_probs=115.6
Q ss_pred HHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccc
Q 010375 303 SILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELS 382 (512)
Q Consensus 303 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (512)
......|.+.+++|+++.+.+...+...++..+++++.|++.||+|||+.+..+.++..++.++....
T Consensus 38 ~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~------------ 105 (394)
T PRK10213 38 LPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFA------------ 105 (394)
T ss_pred HHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHH------------
Confidence 33445677888899999999999999999999999999999999999999999988887776655442
Q ss_pred cchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHH
Q 010375 383 KSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWV 462 (512)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~ 462 (512)
++.+..++.-.+.+.+.+.. .+....++.|.+|+++|+.+.++......++..++|.+.+.+.+..++...+.+.++.
T Consensus 106 -~~~~~l~~~r~l~G~~~g~~-~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l 183 (394)
T PRK10213 106 -NSFSLLLIGRACLGLALGGF-WAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVM 183 (394)
T ss_pred -ChHHHHHHHHHHHHHhhHHH-HHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Confidence 22334444445555555533 3444677789999999999999999999999999999999999988877666554443
Q ss_pred HH
Q 010375 463 TI 464 (512)
Q Consensus 463 ~~ 464 (512)
.+
T Consensus 184 ~~ 185 (394)
T PRK10213 184 GV 185 (394)
T ss_pred HH
Confidence 33
|
|
| >PRK03545 putative arabinose transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=4.6e-11 Score=115.55 Aligned_cols=160 Identities=11% Similarity=0.054 Sum_probs=117.8
Q ss_pred HHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccc
Q 010375 303 SILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELS 382 (512)
Q Consensus 303 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (512)
......|.+.+++|.++.+.++..+...++..++.+..|++.||+|||+.+..+..+..++.+.....
T Consensus 27 ~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~------------ 94 (390)
T PRK03545 27 VPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALA------------ 94 (390)
T ss_pred HHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHh------------
Confidence 34445788888899999999999999999999999999999999999999999888777776665543
Q ss_pred cchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHH
Q 010375 383 KSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWV 462 (512)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~ 462 (512)
++.+..++.-.+.+.+.+ ...+....++.|.+|+++|+++.|+......+|..++|.+.+.+.+..++...+...++.
T Consensus 95 -~~~~~l~~~r~~~G~~~~-~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~ 172 (390)
T PRK03545 95 -WNFTVLLISRIGIAFAHA-IFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGG 172 (390)
T ss_pred -ccHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHH
Confidence 112333333334443433 223444567789999999999999999999999999999999998888877655555444
Q ss_pred HH-HHHHHhhccccC
Q 010375 463 TI-MTIFVYFFLPET 476 (512)
Q Consensus 463 ~~-~~~~~~~~~~~~ 476 (512)
.+ .........|+.
T Consensus 173 ~~l~~~~~~~~~~~~ 187 (390)
T PRK03545 173 ALITLLLLIKLLPLL 187 (390)
T ss_pred HHHHHHHHHHhCCCC
Confidence 33 333334444543
|
|
| >PRK09874 drug efflux system protein MdtG; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.1e-11 Score=118.83 Aligned_cols=138 Identities=19% Similarity=0.095 Sum_probs=121.3
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhhhhh
Q 010375 84 GLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSE 163 (512)
Q Consensus 84 ~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 163 (512)
..+.+.+.+.++..++.+++|+++||+|||+.+..+..+..++.+...+.++.+.+++.+++.|++.+...+...+++.+
T Consensus 259 ~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 338 (408)
T PRK09874 259 ISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVY 338 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHH
Confidence 35667777788889999999999999999999999998888888888888888889999999999999999999999999
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhc
Q 010375 164 MAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGIL 223 (512)
Q Consensus 164 ~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~ 223 (512)
..|+++|++.+++......+|..+||.+ .+...+..||++.|++.+++.++..+..++
T Consensus 339 ~~~~~~~g~~~~~~~~~~~~g~~~gp~~--~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 339 NSSNQIAGRIFSYNQSFRDIGNVTGPLM--GAAISANYGFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred hCCcccceeeehHHHHHHHHHHHhhHHH--HHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 566667779999999998888877666554
|
|
| >PRK03699 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=3.2e-11 Score=116.74 Aligned_cols=145 Identities=15% Similarity=0.062 Sum_probs=122.0
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhh
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVP 158 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 158 (512)
|++..+.+++.+.+.++..++.++.|+++||+|||+.+.....+..+...+....++.+.+.+..++.|++.+..++...
T Consensus 237 g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~ 316 (394)
T PRK03699 237 GMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTII 316 (394)
T ss_pred CCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999888877777777777778887777788899998888888888
Q ss_pred hhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhccCC
Q 010375 159 LYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPE 226 (512)
Q Consensus 159 ~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e 226 (512)
++..|..| +++++..+.......+|..++|.+ .+...+..||+..+++.++..++..+.+...++
T Consensus 317 ~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~--~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (394)
T PRK03699 317 TLGSQQTK-VASPKLVNFILTCGTIGTMLTFVV--TSPIVAHFGLQAALLTANGLYAVVFVMCILLGF 381 (394)
T ss_pred HHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHH--HHHHHHHhCchhhhhhhHHHHHHHHHHHHHHHH
Confidence 88888775 456788888888899999999999 566666778999999888888777666655543
|
|
| >PRK12307 putative sialic acid transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=4e-11 Score=117.54 Aligned_cols=161 Identities=9% Similarity=0.050 Sum_probs=121.0
Q ss_pred HHHHHHHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHH
Q 010375 288 MAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIV 367 (512)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~ 367 (512)
....+..+.............|.+.+++|.++.+.++..+...++..++.++.|+++||+|||+.+..+.+...++....
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~ 100 (426)
T PRK12307 21 FSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLS 100 (426)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Confidence 33444444444455556667777778899999999999999999999999999999999999999999988888877666
Q ss_pred HHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010375 368 SIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLL 447 (512)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~ 447 (512)
.... ..+...+.-.+.+.+.+.. .+....++.|.+|+++|+++.++......+|..+++.+.+.+.
T Consensus 101 ~~~~-------------~~~~l~~~r~l~G~g~g~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~ 166 (426)
T PRK12307 101 GLAS-------------GVIMLTLSRFIVGMGMAGE-YACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFA 166 (426)
T ss_pred HHHh-------------HHHHHHHHHHHHHHHHhhH-HHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHc
Confidence 5542 1333444444555444433 3333567789999999999999999999999999999988888
Q ss_pred hhcchhhHHHHHHHH
Q 010375 448 CSFKFGIFLFFAGWV 462 (512)
Q Consensus 448 ~~~g~~~~~~~~~~~ 462 (512)
+..+|...+.+..+.
T Consensus 167 ~~~~w~~~f~i~~~~ 181 (426)
T PRK12307 167 EAYGWRAAFFVGLLP 181 (426)
T ss_pred ccCCHHHHHHHHHHH
Confidence 888877666554433
|
|
| >COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.1e-10 Score=108.21 Aligned_cols=174 Identities=15% Similarity=0.114 Sum_probs=140.4
Q ss_pred HHHHHHHHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHH
Q 010375 287 VMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVI 366 (512)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~ 366 (512)
++...+..|..........-.+|.+.+++|.|..++|...+.+..+..++.++...+.||++||+++.....+..++.++
T Consensus 15 l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l 94 (394)
T COG2814 15 LLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLL 94 (394)
T ss_pred HHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHH
Confidence 45556666666667777888899999999999999999999999999999999999999999999999999988888888
Q ss_pred HHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 010375 367 VSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTL 446 (512)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~ 446 (512)
..+.. +-+..++.=.+.+...+.. .++......++.|+++|+++.++..+...+...+|.++..++
T Consensus 95 ~alAp-------------~f~~Ll~aR~~~g~a~G~f-~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~i 160 (394)
T COG2814 95 SALAP-------------SFAVLLLARALAGLAHGVF-WSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFL 160 (394)
T ss_pred HHHhc-------------cHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHH
Confidence 87752 2334455555555555533 445568889999999999999999999999999999999999
Q ss_pred HhhcchhhHHHH-HHHHHHHHHHHhhccc
Q 010375 447 LCSFKFGIFLFF-AGWVTIMTIFVYFFLP 474 (512)
Q Consensus 447 ~~~~g~~~~~~~-~~~~~~~~~~~~~~~~ 474 (512)
-|.+||...+.. ..+..+..+..+..+|
T Consensus 161 g~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 161 GQLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999998665554 4444555555556677
|
|
| >PRK03633 putative MFS family transporter protein; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=3.2e-11 Score=116.18 Aligned_cols=141 Identities=13% Similarity=0.132 Sum_probs=116.5
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhh
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVP 158 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 158 (512)
|.+..+.+++.+...++..+++++.|++.||+|+|+++..+..+..++.+... + .......+++.|++.....|...
T Consensus 231 g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~g~~~~~~~p~~~ 307 (381)
T PRK03633 231 GMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFILGAAGFTLYPVAM 307 (381)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHHHHHHHhHHHHHH
Confidence 67888899999999999999999999999999999999888888777665443 2 23445577888888777889999
Q ss_pred hhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhcc
Q 010375 159 LYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILL 224 (512)
Q Consensus 159 ~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~ 224 (512)
+.+.|..|+++++...+.+....++|..+||.+ .+...++.+|++.|.+.+...++..+..++.
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~--~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 371 (381)
T PRK03633 308 AWACEKVEHHELVAMNQALLLSYTVGSLLGPSF--TAMLMQNYSDNLLFIMIASVSFIYLLMLLRK 371 (381)
T ss_pred HHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHhCccHHHHHHHHHHHHHHHHHHhc
Confidence 999999988888888888888899999999999 5666677789999999888887766655554
|
|
| >TIGR00881 2A0104 phosphoglycerate transporter family protein | Back alignment and domain information |
|---|
Probab=99.31 E-value=9.9e-12 Score=119.82 Aligned_cols=164 Identities=11% Similarity=0.102 Sum_probs=120.3
Q ss_pred chhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCc
Q 010375 300 GINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQ 379 (512)
Q Consensus 300 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (512)
....+....|.+.+++|.+..+.++..+...++..++.++.|+++||+|||+.+..+.++..++.++.....
T Consensus 10 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~-------- 81 (379)
T TIGR00881 10 VRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFST-------- 81 (379)
T ss_pred hHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhh--------
Confidence 345666677888888999999999999999999999999999999999999999998888777776665542
Q ss_pred ccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHH-HHHHHHhhcchhhHHHH
Q 010375 380 ELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQ-IFLTLLCSFKFGIFLFF 458 (512)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~-~~~~~~~~~g~~~~~~~ 458 (512)
..+..++...+.+.+.+.. .+....++.|.+|+++|+++.++.+....+|..++|. +.+.+.+..++...+..
T Consensus 82 -----~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 155 (379)
T TIGR00881 82 -----SLWVMAALWALNGIFQGMG-WPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIV 155 (379)
T ss_pred -----hHHHHHHHHHHHHhhcccc-CCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHH
Confidence 2334444444445444433 4455678889999999999999999999999999994 55556566666554444
Q ss_pred HH-HHHHHHHHHhhccccCC
Q 010375 459 AG-WVTIMTIFVYFFLPETK 477 (512)
Q Consensus 459 ~~-~~~~~~~~~~~~~~~~~ 477 (512)
.+ +..+..++..+..++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~ 175 (379)
T TIGR00881 156 PGIIAIIVSLICFLLLRDSP 175 (379)
T ss_pred HHHHHHHHHHHHheeeCCCc
Confidence 44 33444445555555543
|
|
| >PRK10504 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=8.2e-11 Score=116.91 Aligned_cols=162 Identities=12% Similarity=0.000 Sum_probs=122.2
Q ss_pred HHHHHHHHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHH
Q 010375 287 VMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVI 366 (512)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~ 366 (512)
++...+..++..........+.|.+.+++|.++.+.++......++..++.++.|+++||+|||+.+..+..+..++.+.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~ 91 (471)
T PRK10504 12 LWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLF 91 (471)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHH
Confidence 44455555555556667778899999999999999999988888999999999999999999999988877766666554
Q ss_pred HHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 010375 367 VSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTL 446 (512)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~ 446 (512)
.... +..+..+....+.+.+.+.. .+....++.|.+|+++|+++.++......+|..++|.+.+.+
T Consensus 92 ~~~~-------------~~~~~l~~~~~l~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l 157 (471)
T PRK10504 92 CALS-------------GTLNELLLARVLQGVGGAMM-VPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLL 157 (471)
T ss_pred HHHh-------------CCHHHHHHHHHHHHhhhHHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 4332 12333444445555554433 344456778999999999999999999999999999999999
Q ss_pred HhhcchhhHHHHHHHH
Q 010375 447 LCSFKFGIFLFFAGWV 462 (512)
Q Consensus 447 ~~~~g~~~~~~~~~~~ 462 (512)
.+..+|...+.+....
T Consensus 158 ~~~~gw~~~f~~~~~~ 173 (471)
T PRK10504 158 VEYASWHWIFLINIPV 173 (471)
T ss_pred HhhccHHHHHHHHHHH
Confidence 9988876655554443
|
|
| >PRK10473 multidrug efflux system protein MdtL; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=5.4e-11 Score=115.23 Aligned_cols=175 Identities=15% Similarity=0.199 Sum_probs=124.4
Q ss_pred HHHHHHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHH
Q 010375 289 AIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVS 368 (512)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~ 368 (512)
...........+........|.+.+++|.+..+.++..+...++..++.++.|+++||+|||+.+..+.++..++.....
T Consensus 7 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~ 86 (392)
T PRK10473 7 CSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCS 86 (392)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHH
Confidence 33444444444555666778888888999999999999999999999999999999999999999988877776666554
Q ss_pred HHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010375 369 IILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLC 448 (512)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~ 448 (512)
.. +..+..+....+.+.+.+.. .+....++.|.+|+++|+++.++.+....++..++|.+.+.+.+
T Consensus 87 ~~-------------~~~~~~~~~~~l~g~~~~~~-~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~ 152 (392)
T PRK10473 87 LA-------------ETSSLFLAGRFLQGIGAGCC-YVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIML 152 (392)
T ss_pred Hh-------------CcHHHHHHHHHHHHhhhhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 42 11222333333444443322 23345677899999999999999999999999999999988887
Q ss_pred hcchhhHHHHH-HHHHHHHHHHhhccccCC
Q 010375 449 SFKFGIFLFFA-GWVTIMTIFVYFFLPETK 477 (512)
Q Consensus 449 ~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~ 477 (512)
..++...+.+. .+..+..++.....+|++
T Consensus 153 ~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 182 (392)
T PRK10473 153 KFPWQSLFYTMAAMGILVLLLSLFILKETR 182 (392)
T ss_pred CcChHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 77776544443 334444444455566554
|
|
| >PRK03893 putative sialic acid transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=7.3e-11 Score=118.18 Aligned_cols=176 Identities=12% Similarity=0.045 Sum_probs=127.3
Q ss_pred HHHHHHHHHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHH
Q 010375 286 LVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQV 365 (512)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~ 365 (512)
.+....+..+.............|.+.+++|.+..+.+.......++..++.++.|+++||+|||+.+..+.++..++.+
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 100 (496)
T PRK03893 21 AFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTL 100 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 34444455555555556666777888888999999999999999999999999999999999999999888877777766
Q ss_pred HHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 010375 366 IVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLT 445 (512)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~ 445 (512)
...... +.+.......+.+.+.+.. .+....++.|.+|+++|+.+.++......+|..++|.+.+.
T Consensus 101 ~~~~~~-------------~~~~l~~~~~l~G~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 166 (496)
T PRK03893 101 ACGFAP-------------GYWTLFIARLVIGMGMAGE-YGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSL 166 (496)
T ss_pred HHHHHh-------------HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 655431 1233344444444444433 23335677899999999999999999999999999999999
Q ss_pred HHhhcchhhHHHHHHHHHHHHHHHhhcccc
Q 010375 446 LLCSFKFGIFLFFAGWVTIMTIFVYFFLPE 475 (512)
Q Consensus 446 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 475 (512)
+.+..++...+.+..+..+..++.....|+
T Consensus 167 l~~~~~w~~~f~~~~~~~~~~~~~~~~~p~ 196 (496)
T PRK03893 167 VVPVWGWRALFFIGILPIIFALWLRKNLPE 196 (496)
T ss_pred HhccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 988888776665544433333333333343
|
|
| >PRK09556 uhpT sugar phosphate antiporter; Reviewed | Back alignment and domain information |
|---|
Probab=99.30 E-value=6.9e-11 Score=117.00 Aligned_cols=144 Identities=14% Similarity=0.020 Sum_probs=108.2
Q ss_pred cccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHH--HHhhchHHHHHHHHHHHhhhhhhccc
Q 010375 78 CKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAAL--NAAAANLAMLLTGRILLGVGIGFGNQ 155 (512)
Q Consensus 78 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~--~~~~~~~~~l~~~r~l~G~~~~~~~~ 155 (512)
+|++..+.++..+...++..++.+++|+++||+|||+.+.....+..++..+ ....++.+.+.+.+++.|++......
T Consensus 289 ~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 368 (467)
T PRK09556 289 LGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQL 368 (467)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHH
Confidence 4889999999999999999999999999999999998776654444433322 23345666677888888865443333
Q ss_pred hhhhhhhhcCCCCCchhHHHHHHHHHHH-HHHHHHHHHHhhcccC------------CCchhHHHHhhHHHHHHHHHHhh
Q 010375 156 AVPLYLSEMAPTHLRGGLNMMFQLATTL-GIFTANMINYGTQKLE------------TWGWRLSLGLAAAPALMMTVGGI 222 (512)
Q Consensus 156 ~~~~~i~~~~~~~~r~~~~~~~~~~~~l-G~~~~~~~~~~~~~~~------------~~~Wr~~f~~~~~~~~~~~~~~~ 222 (512)
.......|.+|+++|+++.|+.+....+ |..++|.+ .+...+ ..+|+..|++.++..++..+..+
T Consensus 369 ~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~--~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 369 LIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVG--LGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred HHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhh--HHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHH
Confidence 3345677999999999999999888886 77888888 444444 46799999988777777665554
Q ss_pred c
Q 010375 223 L 223 (512)
Q Consensus 223 ~ 223 (512)
+
T Consensus 447 ~ 447 (467)
T PRK09556 447 I 447 (467)
T ss_pred H
Confidence 4
|
|
| >TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial | Back alignment and domain information |
|---|
Probab=99.30 E-value=7.1e-11 Score=116.49 Aligned_cols=173 Identities=10% Similarity=0.169 Sum_probs=127.5
Q ss_pred HHHHHHHHHHHhhchhHHHhhHHHHHHh---cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhh-cCChhHHHHhhHHHHH
Q 010375 287 VMAIFMPMFQILTGINSILFYAPVLFQS---MGFKGDASLYSSAMTGAVLASSTLISIATVDK-LGRRALLISGGIQMIT 362 (512)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~r~~~~~~~~~~~~ 362 (512)
++.+....++...+++....++|.|+++ +|++..+++.......++..++.+++|+++|| +|||+.+..+.++..+
T Consensus 12 ~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~ 91 (475)
T TIGR00924 12 LFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLML 91 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHH
Confidence 4444555555566677778888888765 79999999999999999999999999999999 8999999999988888
Q ss_pred HHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhh---hhhHHHHHHHHHHHHHHHH
Q 010375 363 CQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLET---RSAGQSITVAVNLFFTFVI 439 (512)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~---~~~~~g~~~~~~~~g~~~~ 439 (512)
+.+++.... ..+.......+.+.+.+. ..+....+.+|.+|+++ |+++.++.+...++|..++
T Consensus 92 g~~~~~~~~-------------~~~~~~~~~~l~g~g~g~-~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig 157 (475)
T TIGR00924 92 GHFMLAMSI-------------YPDLIFYGLGTIAVGSGL-FKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFIS 157 (475)
T ss_pred HHHHHHhcc-------------cHhHHHHHHHHHHhcccc-ccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHH
Confidence 776665421 122333333344444442 33444567778887654 8889999999999999999
Q ss_pred HHHHHHHHhhcchhhHHHHHHHHHHHHHHHhhcc
Q 010375 440 AQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFL 473 (512)
Q Consensus 440 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 473 (512)
|.+.+.+.++.++...+...++..+.+++.+...
T Consensus 158 ~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~ 191 (475)
T TIGR00924 158 PLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAG 191 (475)
T ss_pred HHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999998888776666555555444444443
|
The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists. |
| >PRK10489 enterobactin exporter EntS; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=3.8e-11 Score=117.24 Aligned_cols=149 Identities=9% Similarity=0.037 Sum_probs=126.7
Q ss_pred cccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchh
Q 010375 78 CKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAV 157 (512)
Q Consensus 78 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 157 (512)
+|.+..+.|++.+...++..++.++.+++.||.++++.+..+.++.+++.++..+.++.+.+.++.++.|++.+...+..
T Consensus 254 ~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 333 (417)
T PRK10489 254 WQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQ 333 (417)
T ss_pred cCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 37788999999999999999999999999999888888888888888888888888888888889999999888877778
Q ss_pred hhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHH-HHhhccCCCh
Q 010375 158 PLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMT-VGGILLPETP 228 (512)
Q Consensus 158 ~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~-~~~~~~~e~p 228 (512)
.+++.|..|+++|+++++++.....+|..+|+.+ .+...+..|++..+++.++..++.. +....+||.+
T Consensus 334 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l--~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (417)
T PRK10489 334 YTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAAL--LGGLGAMMTPVASASASGFGLLIIGVLLLLVLGELR 403 (417)
T ss_pred HHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHH--HHHHHHHhchhhHHHHHHHHHHHHHHHHHHhccccc
Confidence 8899999999999999999999999999999999 6666677788888887776655544 4444566654
|
|
| >PRK10077 xylE D-xylose transporter XylE; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.5e-10 Score=115.32 Aligned_cols=150 Identities=14% Similarity=0.102 Sum_probs=111.5
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhc--hH-H-HHHHHHHHHhhhhhhc-
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAA--NL-A-MLLTGRILLGVGIGFG- 153 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~-~-~l~~~r~l~G~~~~~~- 153 (512)
|.+....++......+...++.+++|+++||+|||++++.+.++.+++.++.+... +. + ....+.++.+.+.+..
T Consensus 302 g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (479)
T PRK10077 302 GASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSW 381 (479)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccc
Confidence 66777777777778888999999999999999999999999999888887765431 21 1 2233444444444432
Q ss_pred cchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHh----hcccCCCchhHHHHhhHHHHHHHHHHhhc-cCCCh
Q 010375 154 NQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYG----TQKLETWGWRLSLGLAAAPALMMTVGGIL-LPETP 228 (512)
Q Consensus 154 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~----~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~-~~e~p 228 (512)
.+....++.|.+|+++|++++++......+|.++++.+... ....+..+|++.|++.++.+++..++.++ .||+.
T Consensus 382 ~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 461 (479)
T PRK10077 382 GPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETK 461 (479)
T ss_pred cchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhccccCC
Confidence 36678899999999999999999999999999888655211 22334678999999988877777666554 67764
|
|
| >PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms | Back alignment and domain information |
|---|
Probab=99.27 E-value=4e-11 Score=114.33 Aligned_cols=162 Identities=19% Similarity=0.199 Sum_probs=119.2
Q ss_pred chhHHHhhHH-HHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCC
Q 010375 300 GINSILFYAP-VLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPN 378 (512)
Q Consensus 300 ~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (512)
.........| .+.+++|.+..+.++..+...++..++.++.|+++||+|||+.+..+.++..++..+..+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~-------- 82 (352)
T PF07690_consen 11 GFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA-------- 82 (352)
T ss_dssp HHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh--------
Confidence 3445556667 6667799999999999999999999999999999999999999999888888874444421
Q ss_pred cccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHH
Q 010375 379 QELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFF 458 (512)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~ 458 (512)
++.+..+...++.+.+.+.. .+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..++...+.+
T Consensus 83 -----~~~~~~~~~~~l~g~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~ 156 (352)
T PF07690_consen 83 -----SNFWLLLIARFLLGIGSGFF-SPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLI 156 (352)
T ss_dssp -----CCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHH
T ss_pred -----hhHHHHhhhccccccccccc-cccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcccccccccc
Confidence 11334555555555555433 444467888999999999999999999999999999999999888887665555
Q ss_pred HHHHHHHHHHH-hhcccc
Q 010375 459 AGWVTIMTIFV-YFFLPE 475 (512)
Q Consensus 459 ~~~~~~~~~~~-~~~~~~ 475 (512)
.++..+...++ ..+.++
T Consensus 157 ~~~~~~~~~il~~~~~~~ 174 (352)
T PF07690_consen 157 SAILSLIAAILFILFLPE 174 (352)
T ss_dssp HHHHHHHHHHHHHCCC--
T ss_pred ccchhhhhhhhHhhhhhh
Confidence 55554444432 344443
|
These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A. |
| >TIGR00879 SP MFS transporter, sugar porter (SP) family | Back alignment and domain information |
|---|
Probab=99.27 E-value=9.1e-11 Score=117.01 Aligned_cols=148 Identities=15% Similarity=0.071 Sum_probs=114.4
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHh-----hc------hHHHHHHHHHHHh
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAA-----AA------NLAMLLTGRILLG 147 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----~~------~~~~l~~~r~l~G 147 (512)
|.+..+.++......++..++.+++|+++||+|||+.+..+.++.+++.++.++ .+ +...+....++.+
T Consensus 315 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (481)
T TIGR00879 315 GVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIA 394 (481)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHH
Confidence 778888899999999999999999999999999999999988888887777662 11 2333333333333
Q ss_pred hhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhc-cCC
Q 010375 148 VGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGIL-LPE 226 (512)
Q Consensus 148 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~-~~e 226 (512)
.......+....++.|.+|+++|++++++......+|.++++.+ .....+..+|++.|++.++++++..++.++ .||
T Consensus 395 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~--~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~ 472 (481)
T TIGR00879 395 FFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFL--FPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPE 472 (481)
T ss_pred HHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhcCccceehhHHHHHHHHHHHHheeccc
Confidence 33333446667778999999999999999999999999999998 555555668999999988888777666654 676
Q ss_pred Ch
Q 010375 227 TP 228 (512)
Q Consensus 227 ~p 228 (512)
++
T Consensus 473 ~~ 474 (481)
T TIGR00879 473 TK 474 (481)
T ss_pred CC
Confidence 54
|
This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083) |
| >PRK10091 MFS transport protein AraJ; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.8e-10 Score=110.99 Aligned_cols=173 Identities=12% Similarity=0.072 Sum_probs=125.5
Q ss_pred HHHHHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHH
Q 010375 290 IFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSI 369 (512)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~ 369 (512)
.....+.............|.+.+++|.+..+.++..+...++..++.++.|++.||+|||+.+..+..+..++.++...
T Consensus 8 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~ 87 (382)
T PRK10091 8 LALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTL 87 (382)
T ss_pred HHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHH
Confidence 33344444444456666788888889999999999999999999999999999999999999999988888777766554
Q ss_pred HHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 010375 370 ILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCS 449 (512)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~ 449 (512)
. ++.+..++...+.+.+.+... +.......|.+|+++|+.+++.......++..++|.+.+.+.+.
T Consensus 88 ~-------------~~~~~l~~~r~l~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~ 153 (382)
T PRK10091 88 S-------------SSYLMLAIGRLVSGFPHGAFF-GVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQE 153 (382)
T ss_pred h-------------CcHHHHHHHHHHHHhhhHHHH-HHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhh
Confidence 3 223344444445555444332 33345667889999999999999999999999999999998888
Q ss_pred cchhhHHHHHHHHHH-HHHHHhhccccC
Q 010375 450 FKFGIFLFFAGWVTI-MTIFVYFFLPET 476 (512)
Q Consensus 450 ~g~~~~~~~~~~~~~-~~~~~~~~~~~~ 476 (512)
.++...+...++..+ ..+......|+.
T Consensus 154 ~gwr~~f~~~~~~~~~~~~~~~~~lp~~ 181 (382)
T PRK10091 154 FSWRYTFLLIAVFNIAVLASIYFWVPDI 181 (382)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 887665555444333 333334456654
|
|
| >PRK09952 shikimate transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.3e-10 Score=111.08 Aligned_cols=150 Identities=13% Similarity=0.018 Sum_probs=108.2
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHh---h-chHHHHHHHHHHHhhhhhhcc
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAA---A-ANLAMLLTGRILLGVGIGFGN 154 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~---~-~~~~~l~~~r~l~G~~~~~~~ 154 (512)
|.+......+.....+...++.+++|+++||+|||+++..+.++..++.+.... . ++.+.+++..++.|++.+...
T Consensus 282 g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 361 (438)
T PRK09952 282 GLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVV 361 (438)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHH
Confidence 666666555666666777888999999999999999988887766555433322 2 234444556677788888888
Q ss_pred chhhhhhhhcCCCCCchhHHHHHH-HHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhccCCCh
Q 010375 155 QAVPLYLSEMAPTHLRGGLNMMFQ-LATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETP 228 (512)
Q Consensus 155 ~~~~~~i~~~~~~~~r~~~~~~~~-~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p 228 (512)
+...+++.|.+|.+.|+...++.. .+..+|..++|.+..........+|+..+...++.+++..+..+.++|+.
T Consensus 362 ~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~ 436 (438)
T PRK09952 362 CVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLMKDNQ 436 (438)
T ss_pred HHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHccccc
Confidence 888899999999999988888854 44558888999884333222233588888888887777777766677653
|
|
| >PRK14995 methyl viologen resistance protein SmvA; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.9e-10 Score=113.29 Aligned_cols=177 Identities=16% Similarity=0.162 Sum_probs=128.3
Q ss_pred HHHHHHHHHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHH
Q 010375 286 LVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQV 365 (512)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~ 365 (512)
.+...++..+....-......-.|.+.+++|.+..+.++....+.++..++.+..|+++||+|||+.+..+..+..++.+
T Consensus 7 ~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~ 86 (495)
T PRK14995 7 TLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASL 86 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 34445555555555556677788999999999999999999999999999999999999999999999999888888777
Q ss_pred HHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccC-ChhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 010375 366 IVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIF-PLETRSAGQSITVAVNLFFTFVIAQIFL 444 (512)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~g~~~~~~~~g~~~~~~~~~ 444 (512)
+.... ++.+..++.-.+.+.+.+.. .+.....+.+.+ |+++|+++.|+......+|..++|.+.+
T Consensus 87 ~~~~a-------------~~~~~li~~r~l~G~g~~~~-~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg 152 (495)
T PRK14995 87 AAAFS-------------PTASWLIATRALLAIGAAMI-VPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGG 152 (495)
T ss_pred HHHHc-------------CCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66653 22334444444555554433 232233344544 7899999999999999999999999999
Q ss_pred HHHhhcchhhHHHHHHHH-HHHHHHHhhccccC
Q 010375 445 TLLCSFKFGIFLFFAGWV-TIMTIFVYFFLPET 476 (512)
Q Consensus 445 ~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~ 476 (512)
.+.++.+|...+...... .+..++....+|+.
T Consensus 153 ~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~ 185 (495)
T PRK14995 153 ILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQ 185 (495)
T ss_pred HhhccCChHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999998876655554433 33333444455553
|
|
| >PLN00028 nitrate transmembrane transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=4.3e-10 Score=111.30 Aligned_cols=166 Identities=11% Similarity=0.026 Sum_probs=109.2
Q ss_pred HHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHh
Q 010375 293 PMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILG 372 (512)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~ 372 (512)
..+...........+.|.+.+++|++..+.+...+...++..++.++.|+++||+|||+.+..+.++..++.++.....
T Consensus 44 ~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~- 122 (476)
T PLN00028 44 SFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVS- 122 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhc-
Confidence 3333333444556667788888999999999988888899999999999999999999998887776666655444421
Q ss_pred hccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHh----
Q 010375 373 LKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLC---- 448 (512)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~---- 448 (512)
..+..+...++.+.+.+. ..+. ..++.|.+|+++|+++.|+.+....+|..+++.+.+.+..
T Consensus 123 ------------s~~~l~~~r~l~G~~~~~-~~~~-~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~ 188 (476)
T PLN00028 123 ------------SATGFIAVRFFIGFSLAT-FVSC-QYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKD 188 (476)
T ss_pred ------------CHHHHHHHHHHHHHHHHh-hHHH-HHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 122233333334433332 2232 3456799999999999999998888888877766655432
Q ss_pred h-----cchhhHHHHHHHHHHHHHHHhhcc
Q 010375 449 S-----FKFGIFLFFAGWVTIMTIFVYFFL 473 (512)
Q Consensus 449 ~-----~g~~~~~~~~~~~~~~~~~~~~~~ 473 (512)
. .+|...+.+.+++.++..+..+++
T Consensus 189 ~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~ 218 (476)
T PLN00028 189 AGAPSFTAWRIAFFVPGLLHIIMGILVLTL 218 (476)
T ss_pred cCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 1 356555555444443333333333
|
|
| >TIGR00712 glpT glycerol-3-phosphate transporter | Back alignment and domain information |
|---|
Probab=99.24 E-value=5.4e-11 Score=116.79 Aligned_cols=179 Identities=16% Similarity=0.178 Sum_probs=117.3
Q ss_pred HHHHHHHHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHH
Q 010375 287 VMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVI 366 (512)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~ 366 (512)
++...+...........+....|.+.+ .|.++.+.++......++..++.++.|+++||+|||+.+..+.++..++.++
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~ 107 (438)
T TIGR00712 29 FLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLL 107 (438)
T ss_pred HHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHH
Confidence 333333333333333334556676654 6999999999999999999999999999999999999888877776666555
Q ss_pred HHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 010375 367 VSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTL 446 (512)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~ 446 (512)
...... ...+.+.......+.+.+.+..+.+. ...+.|.+|+++|++++++.+....+++.+++.+.+..
T Consensus 108 ~~~~~~---------~~~~~~~l~~~~~l~g~~~g~~~~~~-~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~ 177 (438)
T TIGR00712 108 MGFVPW---------ATSSIAIMFVLLFLNGWFQGMGWPPC-GRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLG 177 (438)
T ss_pred Hhcccc---------ccchHHHHHHHHHHHHHHhhcchHHH-HHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHH
Confidence 433210 00112222333344444444433333 45667899999999999999999999999999887765
Q ss_pred Hh-hcchhhHHHHHHHH-HHHHHHHhhccccC
Q 010375 447 LC-SFKFGIFLFFAGWV-TIMTIFVYFFLPET 476 (512)
Q Consensus 447 ~~-~~g~~~~~~~~~~~-~~~~~~~~~~~~~~ 476 (512)
.+ ..+|...+...++. .+..++..+++||+
T Consensus 178 ~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~ 209 (438)
T TIGR00712 178 MAWFNDWHAALYFPAICAIIVALFAFAMMRDT 209 (438)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 54 35666655554443 44444555556554
|
This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar. |
| >PRK11652 emrD multidrug resistance protein D; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=4e-10 Score=109.24 Aligned_cols=164 Identities=15% Similarity=0.135 Sum_probs=115.9
Q ss_pred chhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCc
Q 010375 300 GINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQ 379 (512)
Q Consensus 300 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (512)
.........|.+.+++|.++.+.++..+...++..++.++.|+++||+|||+.+..+..+..++.+.....
T Consensus 23 ~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~--------- 93 (394)
T PRK11652 23 AQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFA--------- 93 (394)
T ss_pred HHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH---------
Confidence 33444445778888899999999999999999999999999999999999999988877766666554432
Q ss_pred ccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHH
Q 010375 380 ELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFA 459 (512)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~ 459 (512)
++.+..+....+.+.+.+.. .+....+..|.+++++++.+.+..+....++..++|.+.+.+.+..++...+.+.
T Consensus 94 ----~~~~~l~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~ 168 (394)
T PRK11652 94 ----HSLTVLIAASAIQGLGTGVG-GVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFL 168 (394)
T ss_pred ----ccHHHHHHHHHHHHhhhhHH-HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHH
Confidence 11223333333334333322 2333455678888889999999999999999999999999998887876655554
Q ss_pred HHH-HHHHHHHhhccccCC
Q 010375 460 GWV-TIMTIFVYFFLPETK 477 (512)
Q Consensus 460 ~~~-~~~~~~~~~~~~~~~ 477 (512)
++. .+..++..+..||++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~ 187 (394)
T PRK11652 169 LLLGAGVTFSMARWMPETR 187 (394)
T ss_pred HHHHHHHHHHHHHhCCccC
Confidence 443 333334445566643
|
|
| >TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily | Back alignment and domain information |
|---|
Probab=99.24 E-value=1e-10 Score=116.79 Aligned_cols=175 Identities=13% Similarity=0.160 Sum_probs=127.8
Q ss_pred HHHHHHHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHH
Q 010375 288 MAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIV 367 (512)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~ 367 (512)
..+.+..+.............|.+.+++|.+..+.++......++..++.++.|+++||+|||+.+..+.++..++.++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 84 (485)
T TIGR00711 5 IVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLC 84 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 33444444444455667778899999999999999999999999999999999999999999999998888777776655
Q ss_pred HHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010375 368 SIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLL 447 (512)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~ 447 (512)
... ++.+..+....+.+.+.+. ..+....++.|.+|+++|+++.++......+|..++|.+.+.+.
T Consensus 85 ~~~-------------~~~~~l~~~~~~~G~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 150 (485)
T TIGR00711 85 GVA-------------PNLELMIIFRVIQGFGGGP-LIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWII 150 (485)
T ss_pred hCc-------------CCHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhc
Confidence 432 1223344444444444443 33444678889999999999999999999999999999999999
Q ss_pred hhcchhhHHHHHHHH-HHHHHHHhhccccC
Q 010375 448 CSFKFGIFLFFAGWV-TIMTIFVYFFLPET 476 (512)
Q Consensus 448 ~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~ 476 (512)
++.+|...+...... .+..++..+..|++
T Consensus 151 ~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~ 180 (485)
T TIGR00711 151 ENYHWRWIFLINVPIGIIVVVVAFFILPRD 180 (485)
T ss_pred cCcCceehhhhhhHHHHHHHHHHHHHcCCc
Confidence 888876555444333 33333333445543
|
This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. |
| >TIGR00903 2A0129 major facilitator 4 family protein | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.2e-10 Score=108.97 Aligned_cols=162 Identities=10% Similarity=-0.036 Sum_probs=114.7
Q ss_pred hhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcc
Q 010375 301 INSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQE 380 (512)
Q Consensus 301 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (512)
...+....|.+.+++|.+..+.++..+...++..++++..|+++||+|||+.+.........+. .....
T Consensus 7 ~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~-~~~~~---------- 75 (368)
T TIGR00903 7 WVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAA-GRLLD---------- 75 (368)
T ss_pred HHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHH-HHHHH----------
Confidence 3556667888888999999999999999999999999999999999998887654433332221 11111
Q ss_pred cccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHH-H
Q 010375 381 LSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFF-A 459 (512)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~-~ 459 (512)
.++....+..-.+.+.+.+. ..+. ....+|.+|+++|++++++.+....+|..+++.+.+.+.++.+|...+.. +
T Consensus 76 --~~~~~~l~~~R~l~G~g~~~-~~~~-~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~ 151 (368)
T TIGR00903 76 --PFNYEWLLACQLLAALGQPF-LLNA-FAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIA 151 (368)
T ss_pred --hccHHHHHHHHHHHHhHhHH-HHHH-HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHH
Confidence 01123344444444444442 2222 34457999999999999999999999999999999999988888876666 4
Q ss_pred HHHHHHHHHHhhccccCC
Q 010375 460 GWVTIMTIFVYFFLPETK 477 (512)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~ 477 (512)
.+..+..++.++.+||.+
T Consensus 152 ~l~~~~~~~~~~~lp~~p 169 (368)
T TIGR00903 152 AVAAAGIILVLAALPALP 169 (368)
T ss_pred HHHHHHHHHHHHHcCCCC
Confidence 444455555566677654
|
This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix. |
| >PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=2e-10 Score=113.27 Aligned_cols=162 Identities=14% Similarity=0.156 Sum_probs=108.0
Q ss_pred HHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCccccc
Q 010375 304 ILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSK 383 (512)
Q Consensus 304 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (512)
+....|.+.++ |++..+.++..+...++..++.++.|+++||+|+|+.+..+.++..++.+.+.+.... .
T Consensus 48 ~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~---------~ 117 (452)
T PRK11273 48 FALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWA---------T 117 (452)
T ss_pred HHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcc---------c
Confidence 45667877766 9999999999999999999999999999999999999998888777777655543100 0
Q ss_pred chhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHH-HHHHHHHHHhhcchhhHHHHHH-H
Q 010375 384 SFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFV-IAQIFLTLLCSFKFGIFLFFAG-W 461 (512)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~-~~~~~~~~~~~~g~~~~~~~~~-~ 461 (512)
...+..+....+.+.+.+....+. ...+.|.+|+++|++++|+.+....+|+.+ +|.+...+....+|...+.+.+ +
T Consensus 118 ~~~~~~~~~~~l~gi~~g~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~ 196 (452)
T PRK11273 118 SSIAVMFVLLFLCGWFQGMGWPPC-GRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFA 196 (452)
T ss_pred ccHHHHHHHHHHHHHHHhccchHH-HHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 112233333444455554443333 345678899999999999999988888654 4443333333335554444433 3
Q ss_pred HHHHHHHHhhccccC
Q 010375 462 VTIMTIFVYFFLPET 476 (512)
Q Consensus 462 ~~~~~~~~~~~~~~~ 476 (512)
..+..++..+++|++
T Consensus 197 ~~~~~~l~~~~~~~~ 211 (452)
T PRK11273 197 AILVALFAFAMMRDT 211 (452)
T ss_pred HHHHHHHHHHHccCC
Confidence 344445555566654
|
|
| >PRK10207 dipeptide/tripeptide permease B; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.8e-10 Score=111.37 Aligned_cols=175 Identities=14% Similarity=0.188 Sum_probs=125.0
Q ss_pred HHHHHHHHHHHhhchhHHHhhHHHHHHh-cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhh-cCChhHHHHhhHHHHHHH
Q 010375 287 VMAIFMPMFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDK-LGRRALLISGGIQMITCQ 364 (512)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~r~~~~~~~~~~~~~~ 364 (512)
++..+...+.....++....+++.|+++ +|++..++.+..........+..+++|+++|| +|||+.+..+.++..++.
T Consensus 16 ~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~ 95 (489)
T PRK10207 16 FFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGY 95 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHH
Confidence 3334444444555666677677777654 99999888888888887888888899999999 999999999999988888
Q ss_pred HHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChh--hhhhHHHHHHHHHHHHHHHHHHH
Q 010375 365 VIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLE--TRSAGQSITVAVNLFFTFVIAQI 442 (512)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~g~~~~~~~~g~~~~~~~ 442 (512)
+++.+.. ...........+.+.+.+. ..+....++.|.+|++ +|+.+.++.....++|.+++|.+
T Consensus 96 ~~~~~~~------------~~~~ll~~~~~l~~ig~g~-~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l 162 (489)
T PRK10207 96 FMTGMSL------------LKPDLIFIALGTIAVGNGL-FKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSL 162 (489)
T ss_pred HHHHHhc------------cchhHHHHHHHHHHhcccc-ccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHH
Confidence 7766531 1112222334444444443 3344467888999877 45778999999999999999999
Q ss_pred HHHHHhhcchhhHHHHHHHHHHHHHHHhhccc
Q 010375 443 FLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLP 474 (512)
Q Consensus 443 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 474 (512)
.+++.++.||...+....+..+.+++.+...+
T Consensus 163 ~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~ 194 (489)
T PRK10207 163 APVIADKFGYSVTYNLCGAGLIIALLVYFACR 194 (489)
T ss_pred HHHHHHhhChHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999998987766666555555554444433
|
|
| >TIGR00883 2A0106 metabolite-proton symporter | Back alignment and domain information |
|---|
Probab=99.23 E-value=5.5e-11 Score=115.30 Aligned_cols=135 Identities=19% Similarity=0.114 Sum_probs=106.2
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHH--HHHHh--hchHHHHHHHHHHHhhhhhhcc
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGA--ALNAA--AANLAMLLTGRILLGVGIGFGN 154 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~--~~~~~--~~~~~~l~~~r~l~G~~~~~~~ 154 (512)
+.+..+.+.+.+...++..++.+++|+++||+|||+.+..+..+..+.. +...+ .++.+.+++..++.|++.+...
T Consensus 251 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 330 (394)
T TIGR00883 251 GLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYT 330 (394)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHh
Confidence 7788999999999999999999999999999999998775554444333 22222 2466777788899999998899
Q ss_pred chhhhhhhhcCCCCCchhHHHH-HHHHHHHHHHHHHHHHHhhcccCCCc-hhHHHHhhHHHHH
Q 010375 155 QAVPLYLSEMAPTHLRGGLNMM-FQLATTLGIFTANMINYGTQKLETWG-WRLSLGLAAAPAL 215 (512)
Q Consensus 155 ~~~~~~i~~~~~~~~r~~~~~~-~~~~~~lG~~~~~~~~~~~~~~~~~~-Wr~~f~~~~~~~~ 215 (512)
+...+++.|.+|+++|+++.++ ...+..+|..++|.+ .+...+..| |++.++..++.++
T Consensus 331 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~--~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 331 GPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYI--AAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred hhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHH--HHHHHHHcCcchhHHHHHHHHHH
Confidence 9999999999999999999998 456667888899998 555555556 8887776665544
|
This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc. |
| >TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.8e-10 Score=108.28 Aligned_cols=145 Identities=12% Similarity=0.036 Sum_probs=106.9
Q ss_pred HHHHHHHHhhchhHHHhhHHH-HHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHH
Q 010375 290 IFMPMFQILTGINSILFYAPV-LFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVS 368 (512)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~ 368 (512)
..+..+..+........+.|. +.+++|+++.+.++......++..++.++.|+++||+|||+.+..+.++..++.+...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~ 85 (366)
T TIGR00886 6 SWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAG 85 (366)
T ss_pred HHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 344444444555667778885 5667999999999999999999999999999999999999999998888877776665
Q ss_pred HHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010375 369 IILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLC 448 (512)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~ 448 (512)
... ...+..+....+.+.+.+ ...+ ...++.|.+|+++|+++.++......+|..+++.+.+.+..
T Consensus 86 ~~~------------~~~~~~~~~~~~~g~~~~-~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 151 (366)
T TIGR00886 86 LAV------------QSYSVLLLLRLFIGIAGG-SFAS-CMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIG 151 (366)
T ss_pred HHh------------hhHHHHHHHHHHHHHhch-hhHh-HHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 531 022333334444444322 2333 35677899999999999999998888888888777766654
|
|
| >PRK09705 cynX putative cyanate transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=4e-10 Score=108.88 Aligned_cols=146 Identities=13% Similarity=0.073 Sum_probs=112.1
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhc-hHHHHHHHHHHHhhhhhhccchh
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAA-NLAMLLTGRILLGVGIGFGNQAV 157 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~~~~~~ 157 (512)
|.+..+.|.+.+.+.++..++.++.|++.||+|||+.+..+..+..++..+....+ +...+. -++.|++.+...+..
T Consensus 236 g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~l~g~g~g~~~~~~ 313 (393)
T PRK09705 236 GASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVLW--AMVCGLGLGGAFPLC 313 (393)
T ss_pred CCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHHH--HHHHHHhccchHHHH
Confidence 77899999999999999999999999999999999999888887777766554333 322222 245688888887877
Q ss_pred hhhhhhcCC-CCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCC-chhHHHHhhHHHHHHHHHHh-hccCCCh
Q 010375 158 PLYLSEMAP-THLRGGLNMMFQLATTLGIFTANMINYGTQKLETW-GWRLSLGLAAAPALMMTVGG-ILLPETP 228 (512)
Q Consensus 158 ~~~i~~~~~-~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~-~Wr~~f~~~~~~~~~~~~~~-~~~~e~p 228 (512)
.....+..+ +++|++..++.+....++..++|.+ .+...+.. +|+..|++.++.+++..+.. .+.||++
T Consensus 314 ~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~--~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (393)
T PRK09705 314 LLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWF--SGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARF 385 (393)
T ss_pred HHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccc
Confidence 777777775 5688999999999999999999998 44444443 47888888777776665554 4467765
|
|
| >PRK15403 multidrug efflux system protein MdtM; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.8e-10 Score=109.65 Aligned_cols=161 Identities=12% Similarity=0.097 Sum_probs=116.3
Q ss_pred HHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccc
Q 010375 303 SILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELS 382 (512)
Q Consensus 303 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (512)
...--+|.+.++++.+..+.+...+.+.++..++.++.|+++||+|||+.+..+..+..++.++....
T Consensus 34 ~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a------------ 101 (413)
T PRK15403 34 LIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFT------------ 101 (413)
T ss_pred hhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHc------------
Confidence 33334556667799999999999999999999999999999999999999998877776666555442
Q ss_pred cchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHH
Q 010375 383 KSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWV 462 (512)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~ 462 (512)
++.+..++.-++.+.+.+. ..+..+.+..|.+|++++++++++.+....++..++|.+.+.+.+..+|...+...++.
T Consensus 102 -~~~~~l~~~r~l~Gi~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~ 179 (413)
T PRK15403 102 -TSMTQFLIARFIQGTSICF-IATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVM 179 (413)
T ss_pred -CCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 1123334444444444332 23334566789999999999999999999999999999999988887876666555544
Q ss_pred HHHHHH-HhhccccCC
Q 010375 463 TIMTIF-VYFFLPETK 477 (512)
Q Consensus 463 ~~~~~~-~~~~~~~~~ 477 (512)
.++..+ ..+.+||++
T Consensus 180 ~~i~~~~~~~~lp~~~ 195 (413)
T PRK15403 180 GLIAFVGLLLAMPETV 195 (413)
T ss_pred HHHHHHHHHHhCCCCc
Confidence 444333 344567654
|
|
| >PRK11646 multidrug resistance protein MdtH; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=6.5e-10 Score=107.57 Aligned_cols=161 Identities=12% Similarity=0.129 Sum_probs=114.8
Q ss_pred chhHHHhhHHHH-HHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCC
Q 010375 300 GINSILFYAPVL-FQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPN 378 (512)
Q Consensus 300 ~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (512)
+......+.+.+ .++.|+++.+.++......+...+..++.|+++||++||+.+..+..+..++.+.....
T Consensus 25 ~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~-------- 96 (400)
T PRK11646 25 GFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIA-------- 96 (400)
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHh--------
Confidence 334444455544 46699999999999999999999999999999999999999999888888777766542
Q ss_pred cccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHH
Q 010375 379 QELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFF 458 (512)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~ 458 (512)
+..+.......+.+.+.+. ..+...+++.|.+|+++|+++.|+.+....+|..++|.+.+.+. ..++...+.+
T Consensus 97 -----~~~~~l~~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~ 169 (400)
T PRK11646 97 -----HEPWLLWLSCILSGLGGTL-FDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCAT 169 (400)
T ss_pred -----ccHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHH
Confidence 1233344444444444432 23333566789999999999999999999999999999999988 5666554444
Q ss_pred HHHH-HHHHHHHhhcccc
Q 010375 459 AGWV-TIMTIFVYFFLPE 475 (512)
Q Consensus 459 ~~~~-~~~~~~~~~~~~~ 475 (512)
.++. .+..++..+..|+
T Consensus 170 ~~~~~~~~~i~~~~~~~~ 187 (400)
T PRK11646 170 GAVLFVLAAAFNAWLLPA 187 (400)
T ss_pred HHHHHHHHHHHHHHhCCc
Confidence 4433 3333333344454
|
|
| >PRK15402 multidrug efflux system translocase MdfA; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=5.2e-10 Score=108.90 Aligned_cols=164 Identities=12% Similarity=0.083 Sum_probs=116.0
Q ss_pred chhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCc
Q 010375 300 GINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQ 379 (512)
Q Consensus 300 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (512)
....+....|.+.+++|.++.+.+.......++..++.++.|+++||+|||+.+..+.....++.......
T Consensus 28 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~--------- 98 (406)
T PRK15402 28 ANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLA--------- 98 (406)
T ss_pred hhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH---------
Confidence 34444555677778899999999999999999999999999999999999999988877777666655442
Q ss_pred ccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHH
Q 010375 380 ELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFA 459 (512)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~ 459 (512)
+..+..+....+.+.+.+.. .+.....+.|.+|++.|.++.++......++..++|.+.+.+.+..++...+.+.
T Consensus 99 ----~~~~~l~~~~~l~G~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~ 173 (406)
T PRK15402 99 ----QSIEQFTLLRFLQGIGLCFI-GAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLF 173 (406)
T ss_pred ----ccHHHHHHHHHHHHhHhhhH-HHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHH
Confidence 11223333333334333322 2344566789999999999999998888889999999999988887776555554
Q ss_pred HHHHHH-HHHHhhccccCC
Q 010375 460 GWVTIM-TIFVYFFLPETK 477 (512)
Q Consensus 460 ~~~~~~-~~~~~~~~~~~~ 477 (512)
+++.+. .+..+...||++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~ 192 (406)
T PRK15402 174 AALAALSFFGLWRAMPETA 192 (406)
T ss_pred HHHHHHHHHHHHHhCCCCC
Confidence 444333 333344556554
|
|
| >PRK11195 lysophospholipid transporter LplT; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=5e-10 Score=108.08 Aligned_cols=157 Identities=10% Similarity=0.103 Sum_probs=112.9
Q ss_pred hHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCccc
Q 010375 302 NSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQEL 381 (512)
Q Consensus 302 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (512)
.......+.+.++.+.++.+.++......+...+..++.|+++||+|||+++..+..+..++.+.+....
T Consensus 20 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~---------- 89 (393)
T PRK11195 20 NALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGI---------- 89 (393)
T ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHH----------
Confidence 3344445556677888888899999999999999999999999999999999999887776655543321
Q ss_pred ccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHH
Q 010375 382 SKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGW 461 (512)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~ 461 (512)
.. +...++.+.+.+ ...|...+++.|.+|+++|+++.|+.+....++..++|.+.|.+.+.. +...+.....
T Consensus 90 ----~~--~~~r~l~G~~~a-~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-~~~~~~i~~~ 161 (393)
T PRK11195 90 ----HP--LLAYGLVGIGAA-AYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH-AEAALAVCAL 161 (393)
T ss_pred ----HH--HHHHHHHHHHHH-HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 11 222333444444 445565788899999999999999999999999999999999998864 3333333333
Q ss_pred HHHHHHHHhhccccC
Q 010375 462 VTIMTIFVYFFLPET 476 (512)
Q Consensus 462 ~~~~~~~~~~~~~~~ 476 (512)
+.+...+....+|+.
T Consensus 162 ~~~~~~~~~~~l~~~ 176 (393)
T PRK11195 162 IYLLAALFNLFIPRL 176 (393)
T ss_pred HHHHHHHHHhcCCCC
Confidence 333334444556654
|
|
| >TIGR00897 2A0118 polyol permease family | Back alignment and domain information |
|---|
Probab=99.21 E-value=3.9e-10 Score=109.42 Aligned_cols=152 Identities=11% Similarity=-0.010 Sum_probs=105.1
Q ss_pred HHHHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHH
Q 010375 291 FMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSII 370 (512)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~ 370 (512)
.+..+...........+.+.+.+++|.++.+.+...+...++..++.++.|++.||+|||+.+..+..+..++.......
T Consensus 19 ~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~ 98 (402)
T TIGR00897 19 YIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVF 98 (402)
T ss_pred HHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333343444556677778899999999999999999999999999999999999999998888777765443221
Q ss_pred HhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHH-HHHHHHHHHHHhh
Q 010375 371 LGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFT-FVIAQIFLTLLCS 449 (512)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~-~~~~~~~~~~~~~ 449 (512)
.. ...+.+..+....+.+.+.+.. .+.......+.+|+++|++++|+.+....+|. .++|.+.+.+.+.
T Consensus 99 ~~---------~~~~~~~l~~~~~i~G~g~~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~ 168 (402)
T TIGR00897 99 GL---------GHANYPLILLFYGIRGLGYPLF-AYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPA 168 (402)
T ss_pred hc---------cCccHHHHHHHHHHHHcchHHH-HhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 10 0011222333333334333322 22223455688899999999999999999986 5788888888877
Q ss_pred cch
Q 010375 450 FKF 452 (512)
Q Consensus 450 ~g~ 452 (512)
.++
T Consensus 169 ~g~ 171 (402)
T TIGR00897 169 FGE 171 (402)
T ss_pred cch
Confidence 764
|
This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis. |
| >PRK11043 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=9.7e-10 Score=106.82 Aligned_cols=155 Identities=12% Similarity=0.049 Sum_probs=109.9
Q ss_pred hHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchh
Q 010375 307 YAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFS 386 (512)
Q Consensus 307 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (512)
..|.+.+++|.++.+.++..+...++..++.++.|+++||+|||+.+..+..+..++....... +..
T Consensus 28 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-------------~~~ 94 (401)
T PRK11043 28 AFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWV-------------ESA 94 (401)
T ss_pred hHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHh-------------cCH
Confidence 3344567799999999999999999999999999999999999999988877766665554432 112
Q ss_pred hHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHH
Q 010375 387 ILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMT 466 (512)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 466 (512)
+.......+.+.+.+.. .+....+..|.+|+++++...+..+....++..++|.+.+.+.+..++...+....+..+..
T Consensus 95 ~~l~~~~~l~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~ 173 (401)
T PRK11043 95 AQLLVLRFVQAVGVCSA-AVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLL 173 (401)
T ss_pred HHHHHHHHHHHhhhHHH-HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Confidence 22333333333333322 22224566789999989989999888889999999999999999888776555554444444
Q ss_pred HHHhhcccc
Q 010375 467 IFVYFFLPE 475 (512)
Q Consensus 467 ~~~~~~~~~ 475 (512)
.+..+..++
T Consensus 174 ~~~~~~~~~ 182 (401)
T PRK11043 174 ILPTLRLKP 182 (401)
T ss_pred HHHHHHcCC
Confidence 444444443
|
|
| >TIGR00887 2A0109 phosphate:H+ symporter | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.4e-09 Score=108.65 Aligned_cols=152 Identities=20% Similarity=0.181 Sum_probs=107.6
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHH
Q 010375 318 KGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFV 397 (512)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (512)
+..+.++......++.+++.++.++++||+|||+.+..+.++..++.++....... .+....+..++.-++.+
T Consensus 54 ~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~-------~~~~~~~~~~~~r~l~G 126 (502)
T TIGR00887 54 PSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGS-------SPKSVMATLCFWRFWLG 126 (502)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCc-------ccchHHHHHHHHHHHHH
Confidence 34466788889999999999999999999999999988887777766555442100 00001234455555556
Q ss_pred HHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHh-----------------------hcchhh
Q 010375 398 LAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLC-----------------------SFKFGI 454 (512)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~-----------------------~~g~~~ 454 (512)
.+.+.... ....++.|.+|++.|+++.++.+....+|..+++.+...+.. ..+|..
T Consensus 127 ~~~g~~~~-~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~ 205 (502)
T TIGR00887 127 VGIGGDYP-LSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRI 205 (502)
T ss_pred HHHhhhhH-HHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHH
Confidence 66654433 446888999999999999999999999999888887765532 124666
Q ss_pred HHHHHHHHHHHHHHHhhccccCC
Q 010375 455 FLFFAGWVTIMTIFVYFFLPETK 477 (512)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~ 477 (512)
.+.+.++..+...+..+++||+.
T Consensus 206 ~~~~~~ip~~i~~~~~~~lpESp 228 (502)
T TIGR00887 206 LIGFGAVPALLALYFRLTIPETP 228 (502)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCH
Confidence 66666655555566667788863
|
This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083). |
| >PRK11010 ampG muropeptide transporter; Validated | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.8e-09 Score=107.16 Aligned_cols=147 Identities=14% Similarity=0.108 Sum_probs=114.1
Q ss_pred ccCcchhHHHHH-HHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHH---Hhh-chHHHHHHHHHHHhhhhhhc
Q 010375 79 KYDNQGLAAFTS-SLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALN---AAA-ANLAMLLTGRILLGVGIGFG 153 (512)
Q Consensus 79 ~~s~~~~g~~~s-~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~-~~~~~l~~~r~l~G~~~~~~ 153 (512)
|++..+.+++.. ...++..++.+++|+++||+|+|+.+.++.++.+++.++. +.. ++.+.+.+.-++..++.|..
T Consensus 254 G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~ 333 (491)
T PRK11010 254 GFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMG 333 (491)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHH
Confidence 889999999974 6668999999999999999999998777666555544322 333 45555555666666666666
Q ss_pred cchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhccCCC
Q 010375 154 NQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPET 227 (512)
Q Consensus 154 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~ 227 (512)
.+...++..+..+++.+++..++.+....+|..+++.+ .+...+..||+..|.+.++.+++..++..+++++
T Consensus 334 ~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~--~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~~~ 405 (491)
T PRK11010 334 TAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPV--AGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQT 405 (491)
T ss_pred HHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH--HHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 67778889999999999999999999999999888877 5555666799999999988888887777666543
|
|
| >PRK15034 nitrate/nitrite transport protein NarU; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=5.8e-10 Score=107.15 Aligned_cols=152 Identities=13% Similarity=0.035 Sum_probs=105.6
Q ss_pred HHHHHHHHHHHHHhhchhHHHhhHHHHHH-hcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHH
Q 010375 285 QLVMAIFMPMFQILTGINSILFYAPVLFQ-SMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITC 363 (512)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~ 363 (512)
+.++...+.+...+..........+.+.+ ++|++..+.++..++..+...++++..|++.||+|.|+.+..+.++..+.
T Consensus 34 r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~ 113 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIP 113 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 44555555555555555555555666655 69999999999999999999999999999999999999998888887766
Q ss_pred HHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHH
Q 010375 364 QVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIF 443 (512)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~ 443 (512)
.+...+.... ..++.+..++.-.+.+.+ +..+. .....+++.+|+++||++.|+....+++|..+++.+.
T Consensus 114 ~~~~~~a~~~--------~~~s~~~lli~r~l~Gig-g~~f~-~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~ 183 (462)
T PRK15034 114 CVWLGIAVQN--------PNTPFGIFIVIALLCGFA-GANFA-SSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVA 183 (462)
T ss_pred HHHHHHHHcc--------cCCCHHHHHHHHHHHHHH-HHhHH-HHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHH
Confidence 6655543100 001223344444444443 33333 3456778999999999999999877777777666655
Q ss_pred HHH
Q 010375 444 LTL 446 (512)
Q Consensus 444 ~~~ 446 (512)
+.+
T Consensus 184 p~~ 186 (462)
T PRK15034 184 PLV 186 (462)
T ss_pred HHH
Confidence 543
|
|
| >COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.18 E-value=7e-10 Score=101.74 Aligned_cols=175 Identities=12% Similarity=-0.005 Sum_probs=125.9
Q ss_pred HHHHHHHHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHH
Q 010375 287 VMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVI 366 (512)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~ 366 (512)
++...+.....++....+....+.+-+++|+|+.|.+++.++..+.+.+.++..|.+.||+|.|++...+.++..+-.+.
T Consensus 16 L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~ 95 (417)
T COG2223 16 LWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLG 95 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHH
Confidence 44445555555555556666666666779999999999999999999999999999999999999999998888877777
Q ss_pred HHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 010375 367 VSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTL 446 (512)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~ 446 (512)
+.+... .+..+..+..-.+.+.+. +...+...++++.+|++++|.++|+.. .+++|..+...+.+.+
T Consensus 96 ~~~a~~----------~~~~~~ll~~gll~G~~G--asFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v 162 (417)
T COG2223 96 LAFAVT----------YPSTWQLLVIGLLLGLAG--ASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLV 162 (417)
T ss_pred HHHHcc----------CCchHHHHHHHHHHhccc--ceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHH
Confidence 766532 111233333333333332 333444678899999999999999999 9999999999999999
Q ss_pred Hhhcc---hhhHHHHHHHHHHH-HHHHhhccc
Q 010375 447 LCSFK---FGIFLFFAGWVTIM-TIFVYFFLP 474 (512)
Q Consensus 447 ~~~~g---~~~~~~~~~~~~~~-~~~~~~~~~ 474 (512)
....+ +.....+..+.+++ .+..++..+
T Consensus 163 ~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~ 194 (417)
T COG2223 163 AVAFGFLAWRNVAGIYVVALAIAAVLAWLGMN 194 (417)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 88887 55544444444444 444444443
|
|
| >PRK11102 bicyclomycin/multidrug efflux system; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=4.9e-10 Score=107.95 Aligned_cols=160 Identities=19% Similarity=0.211 Sum_probs=119.0
Q ss_pred HHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccc
Q 010375 303 SILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELS 382 (512)
Q Consensus 303 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (512)
......|.+.+++|.++.+.++..+...++..++.++.|+++||+|||+.+..+.++..++...+....
T Consensus 9 ~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~----------- 77 (377)
T PRK11102 9 MYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQ----------- 77 (377)
T ss_pred HHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHc-----------
Confidence 344567778888999999999999999999999999999999999999999988887777776665431
Q ss_pred cchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHH-
Q 010375 383 KSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGW- 461 (512)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~- 461 (512)
..+.......+.+.+.+.. .+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..++...+...++
T Consensus 78 --~~~~~~~~~~l~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~ 154 (377)
T PRK11102 78 --TIDQLIYMRFLHGLAAAAA-SVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALA 154 (377)
T ss_pred --cHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 1233344444444444433 333356778999999999999999999999999999999999988887655544443
Q ss_pred HHHHHHHHhhccccC
Q 010375 462 VTIMTIFVYFFLPET 476 (512)
Q Consensus 462 ~~~~~~~~~~~~~~~ 476 (512)
..+..++..+..+|+
T Consensus 155 ~~~~~~~~~~~~~~~ 169 (377)
T PRK11102 155 AILAAALVFFFIPET 169 (377)
T ss_pred HHHHHHHHHHhCCcc
Confidence 333334444555554
|
|
| >PRK11128 putative 3-phenylpropionic acid transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.2e-09 Score=105.38 Aligned_cols=139 Identities=16% Similarity=0.086 Sum_probs=116.7
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhh
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVP 158 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 158 (512)
|.+..+.|.+.+...++..+..++.|++.||+|+|+.+..+.++.+++.++.+++++.+.+++..++.|++.+...+...
T Consensus 236 g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 315 (382)
T PRK11128 236 GYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAM 315 (382)
T ss_pred CCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77889999999999999999999999999999999999999999999888888899999999999999999998888888
Q ss_pred hhhhhcCCCCCchhHHHHHH-HHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHh
Q 010375 159 LYLSEMAPTHLRGGLNMMFQ-LATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGG 221 (512)
Q Consensus 159 ~~i~~~~~~~~r~~~~~~~~-~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~ 221 (512)
.++.+. +++++++..+... ...++|..+||.+ ++...+..++ ..++..++++++.+++.
T Consensus 316 ~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i--~G~l~~~~g~-~~~~~~~~~~~~~~~~~ 375 (382)
T PRK11128 316 RYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVL--SGFLYQHLGA-GVFWVMALVALPALFIR 375 (382)
T ss_pred HHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhccH-HHHHHHHHHHHHHHHHH
Confidence 888886 5666788888886 5567888999999 6666666677 46666666666554443
|
|
| >TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter | Back alignment and domain information |
|---|
Probab=99.17 E-value=2e-10 Score=113.83 Aligned_cols=143 Identities=15% Similarity=0.026 Sum_probs=106.2
Q ss_pred hcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHH
Q 010375 314 SMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVI 393 (512)
Q Consensus 314 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (512)
+++++..+.+...+...++..++.++.|++.||+|+|+.+..+.++..++.++...... ...+..++.-
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~-----------~~~~~l~~~r 138 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAG-----------GGIALVVFCR 138 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHH-----------cCchHHHHHH
Confidence 46788888999999999999999999999999999999998887776666555433210 1122334444
Q ss_pred HHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc-chhhHHHHHHHHHHHHHH
Q 010375 394 CLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSF-KFGIFLFFAGWVTIMTIF 468 (512)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~ 468 (512)
++.+.+.+ ...+....+++|.+|+++|+++.++......+|..+++.+.+.+.+.. ++...+.+.++..+...+
T Consensus 139 ~~~G~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~ 213 (465)
T TIGR00894 139 VIQGLAQG-SVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSL 213 (465)
T ss_pred HHHHHhcc-cchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHH
Confidence 44554444 334444678889999999999999999999999999999999998884 776655555544443333
|
|
| >TIGR00806 rfc RFC reduced folate carrier | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.2e-09 Score=101.44 Aligned_cols=160 Identities=10% Similarity=0.099 Sum_probs=125.0
Q ss_pred hHHHhhHHHHHHhcCCCCch-hhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcc
Q 010375 302 NSILFYAPVLFQSMGFKGDA-SLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQE 380 (512)
Q Consensus 302 ~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (512)
....+..|++.+++|++..+ .+.+......+..+..+..|+++||+|.|+.+..+.+...+..+++.+..
T Consensus 43 ~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~--------- 113 (511)
T TIGR00806 43 PGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGT--------- 113 (511)
T ss_pred chHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH---------
Confidence 45566678888889999999 99999999999999999999999999999999998888777777776642
Q ss_pred cccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchh---hHHH
Q 010375 381 LSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFG---IFLF 457 (512)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~---~~~~ 457 (512)
....+.+.-++.+.+-+..+ ....++...+|+++|+++.|+.+....+|.++++++.+. ....++. ....
T Consensus 114 ----Sl~~L~i~R~llGvaEA~~~--A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~ 186 (511)
T TIGR00806 114 ----SVWHMQLMEVFYSVTMAARI--AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNI 186 (511)
T ss_pred ----HHHHHHHHHHHHHHHHHHHH--HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHH
Confidence 23445556666666666555 335777899999999999999999999999999999998 4455643 3334
Q ss_pred HHHHHHHHHHHHhhccccCC
Q 010375 458 FAGWVTIMTIFVYFFLPETK 477 (512)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~ 477 (512)
+.....++++++.+++|..+
T Consensus 187 Isl~s~~~a~~~a~~LP~~~ 206 (511)
T TIGR00806 187 ISLVFMTFSVFLALFLKRPK 206 (511)
T ss_pred HHHHHHHHHHHHHHhCCCCc
Confidence 44455566666677777544
|
Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined. |
| >TIGR00882 2A0105 oligosaccharide:H+ symporter | Back alignment and domain information |
|---|
Probab=99.17 E-value=6.7e-10 Score=107.66 Aligned_cols=141 Identities=13% Similarity=0.169 Sum_probs=118.4
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhh
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVP 158 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 158 (512)
+.+..+.|.+.+...+...++.++.|++.||+|||+.+.++.++.++...+..++++.+.+++.+++.|++.+.......
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 329 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCF 329 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566789999999999999999999999999999999999999998888878889999999999999998877666666
Q ss_pred hhhhhcCCCCCchhHHHH-HHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHh
Q 010375 159 LYLSEMAPTHLRGGLNMM-FQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGG 221 (512)
Q Consensus 159 ~~i~~~~~~~~r~~~~~~-~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~ 221 (512)
.+..+..+++.++...+. ++....+|..+++.+ .+...+..||+..|.+.++..++..++.
T Consensus 330 ~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l--~G~l~~~~G~~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 330 KYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTL--AGNMYDSIGFQGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred HHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHh--HHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 777888887777776665 667889999999999 6666677799999999888877665544
|
|
| >KOG3098 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.8e-08 Score=95.61 Aligned_cols=322 Identities=12% Similarity=0.079 Sum_probs=180.5
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCC
Q 010375 89 TSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTH 168 (512)
Q Consensus 89 ~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 168 (512)
.++-+....+++++.+.+.|+.|.|..+.++...+....+..-+ +|-+.++++-.+.|+|.+..+..--.+++|+.+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 67777888999999999999999999999999999887777655 45667788999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhhcccCC------Cchh-H----------HHHhhHHHH---HHHHHHhhccCCCh
Q 010375 169 LRGGLNMMFQLATTLGIFTANMINYGTQKLET------WGWR-L----------SLGLAAAPA---LMMTVGGILLPETP 228 (512)
Q Consensus 169 ~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~------~~Wr-~----------~f~~~~~~~---~~~~~~~~~~~e~p 228 (512)
++.+..++.......+.++|..+-........ .+-+ + ...+.++++ .+..+...+.|...
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~p~~~ 214 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFLPSKD 214 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeecCccc
Confidence 99999999998888888888776322221111 1111 1 111111111 11122222333221
Q ss_pred hHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhH
Q 010375 229 NSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYA 308 (512)
Q Consensus 229 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (512)
. .. + .+.. +.......+..++....++++.+......... .........
T Consensus 215 ~-~~------~---------------------~~~~--~~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~-~~Sf~~~iy 263 (461)
T KOG3098|consen 215 V-VN------C---------------------KSSS--ETSFSELLKLTFKLLKTPKMLLLFPFFFYTGL-ETSFWISIY 263 (461)
T ss_pred h-hh------h---------------------hhhc--cccHHHHHHHHHHHhcCHhHHHHHHHHHHHHH-HHHHHHhcc
Confidence 0 00 0 0000 00111122222322223333332222222111 111111111
Q ss_pred HHHH--H-hcCCC-CchhhHHHHHHHHHHHHHHHHHHHHHhh---cCChhHHHHhhHHHHHHHHHHHHHHhhccC--CCc
Q 010375 309 PVLF--Q-SMGFK-GDASLYSSAMTGAVLASSTLISIATVDK---LGRRALLISGGIQMITCQVIVSIILGLKFG--PNQ 379 (512)
Q Consensus 309 ~~~~--~-~~g~~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~---~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 379 (512)
|.-+ . ..+.+ ....+......+++.+++....+.+.+| +|+++.+.++..+..+..++..+......+ +.+
T Consensus 264 pt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~ 343 (461)
T KOG3098|consen 264 PTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTD 343 (461)
T ss_pred chhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCc
Confidence 2111 1 12222 2234555666677777777777777765 577788777777666666555444322111 111
Q ss_pred cccc---chhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 010375 380 ELSK---SFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFL 444 (512)
Q Consensus 380 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~ 444 (512)
..+. +......+...+.+.+-+ .+....+.++...+ ++.|..+.++.-.-..+++.++-...+
T Consensus 344 ~~~~~~~~~~~~~~ii~~l~G~~D~-~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~ 409 (461)
T KOG3098|consen 344 SPPLLFTPSYYLALIIGFLLGFGDA-CFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSP 409 (461)
T ss_pred ccccccccchhHHHHHHHHHhhHHH-HHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhh
Confidence 1110 112233333344444433 44445567777888 467888888888877777766555443
|
|
| >PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=99.17 E-value=4.9e-10 Score=98.12 Aligned_cols=150 Identities=16% Similarity=0.101 Sum_probs=116.1
Q ss_pred CCccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhh-------chHHHHHHHHHHHh
Q 010375 75 NNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAA-------ANLAMLLTGRILLG 147 (512)
Q Consensus 75 ~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-------~~~~~l~~~r~l~G 147 (512)
++.+|+|.+|...+.+...+|..+| ++.|.+.|++|+|.++.+|.+...+|..+...+ .++|.+.+..++.|
T Consensus 29 k~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~ 107 (250)
T PF06813_consen 29 KSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGG 107 (250)
T ss_pred HHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHc
Confidence 4445999999999999999999875 889999999999999999999999998877664 46788888888888
Q ss_pred hhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhccCCC
Q 010375 148 VGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPET 227 (512)
Q Consensus 148 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~ 227 (512)
.+.+.....+.....+.|| ++||++.++.-...+++..+-..+..... ++..-+..+.+...+.++.++..+++++.
T Consensus 108 ~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f--~~~~~~fll~la~~~~~v~l~~~~~vr~~ 184 (250)
T PF06813_consen 108 NSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFF--GDDPSSFLLFLAVLPAVVCLVAMFFVRPV 184 (250)
T ss_pred ccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHc--CCChHHHHHHHHHHHHHHHHHHhhheecc
Confidence 8887777777777778997 57999999999999999888777743333 33234445555555555555555565444
Q ss_pred h
Q 010375 228 P 228 (512)
Q Consensus 228 p 228 (512)
|
T Consensus 185 ~ 185 (250)
T PF06813_consen 185 P 185 (250)
T ss_pred C
Confidence 3
|
|
| >TIGR00885 fucP L-fucose:H+ symporter permease | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.2e-09 Score=105.70 Aligned_cols=147 Identities=10% Similarity=-0.049 Sum_probs=110.9
Q ss_pred HHHHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHH
Q 010375 291 FMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSII 370 (512)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~ 370 (512)
...++.............|.+.+++|.+..+.++..+...++..++++..+++.||+|||+.+..+..+..++..++...
T Consensus 9 ~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~ 88 (410)
T TIGR00885 9 TSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPA 88 (410)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH
Confidence 33344444444555677788888899999999999999999999999999999999999999999998888887665432
Q ss_pred HhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010375 371 LGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLC 448 (512)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~ 448 (512)
.. .++.+..+...++.+.+.+....+. ..+..+..|++++++..++.+....+|..++|.+.+.+..
T Consensus 89 ~~----------~~~~~~~l~~~~l~G~g~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~ 155 (410)
T TIGR00885 89 AE----------IMNYTLFLVGLFILTAGLGFLETAA-NPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLIL 155 (410)
T ss_pred Hh----------hccHHHHHHHHHHHHhhHHHHHhhh-hHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11 0122334445555566655444433 4566788899999999999999999999999999887753
|
This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector. |
| >PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.3e-09 Score=106.20 Aligned_cols=151 Identities=8% Similarity=0.079 Sum_probs=129.8
Q ss_pred CCccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchh--HHHHHHHHHHHHHHHHHHh--------hchHHHHHHHHH
Q 010375 75 NNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRR--ASIICGGISFLLGAALNAA--------AANLAMLLTGRI 144 (512)
Q Consensus 75 ~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr--~~l~~~~~~~~~~~~~~~~--------~~~~~~l~~~r~ 144 (512)
++++|++..+...+.-...+..++|++++|++.||+|.| ++++.+++++.+..+...+ .++-+.+.+.-+
T Consensus 309 ~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~ 388 (477)
T PF11700_consen 309 TEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAV 388 (477)
T ss_pred HHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHH
Confidence 445699999999999999999999999999999999999 8999888888666655555 567788999999
Q ss_pred HHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCC-CchhHHHHhhHHHHHHHHHHhhc
Q 010375 145 LLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLET-WGWRLSLGLAAAPALMMTVGGIL 223 (512)
Q Consensus 145 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~-~~Wr~~f~~~~~~~~~~~~~~~~ 223 (512)
+.|+..|..++...++.+|..|+++.+..+|++....-....+||++. +...+. .+-|+.+....++.++.+++.++
T Consensus 389 ~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~--g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~ 466 (477)
T PF11700_consen 389 LIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLF--GLITDATGSQRYGFLFLLVLFLIGLILLFF 466 (477)
T ss_pred HHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHH--HHHHHHhCCchhHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999994 443333 24788888888888888877777
Q ss_pred cCCC
Q 010375 224 LPET 227 (512)
Q Consensus 224 ~~e~ 227 (512)
++.+
T Consensus 467 v~~~ 470 (477)
T PF11700_consen 467 VDVE 470 (477)
T ss_pred ccch
Confidence 7554
|
Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins. |
| >PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.4e-09 Score=107.06 Aligned_cols=142 Identities=15% Similarity=0.223 Sum_probs=127.5
Q ss_pred cccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchh
Q 010375 78 CKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAV 157 (512)
Q Consensus 78 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 157 (512)
+|.+....|++.+++.+|..+|+++.+++.+|+++++.+..+.++++++.+..+++++.+..++.-++.|++........
T Consensus 249 l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~ 328 (524)
T PF05977_consen 249 LGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGAAWIIANSSL 328 (524)
T ss_pred hCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 37789999999999999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred hhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHh
Q 010375 158 PLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGG 221 (512)
Q Consensus 158 ~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~ 221 (512)
.+.+.+..|++.|||+++++.+....+..+|..+ .+...+..|-+..+.+.++..++..++.
T Consensus 329 ~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll--~G~la~~~g~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 329 NTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLL--WGFLADHFGVRTALLIAGAALLLSALIA 390 (524)
T ss_pred HHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHH--HHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998 6666777788888887776555554443
|
EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function []. |
| >PRK09584 tppB putative tripeptide transporter permease; Reviewed | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.5e-09 Score=106.16 Aligned_cols=166 Identities=13% Similarity=0.069 Sum_probs=113.7
Q ss_pred HHHHHHHHHHhhchhHHHhhHHHHH-HhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhh-cCChhHHHHhhHHHHHHHH
Q 010375 288 MAIFMPMFQILTGINSILFYAPVLF-QSMGFKGDASLYSSAMTGAVLASSTLISIATVDK-LGRRALLISGGIQMITCQV 365 (512)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~r~~~~~~~~~~~~~~~ 365 (512)
+..+...++...+++.+..+++.++ +++|++..+++..............+++|+++|| +|||+.+..+.++..++..
T Consensus 24 ~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~ 103 (500)
T PRK09584 24 YLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYA 103 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 3444444555556667777778777 4599998888777776665555556789999999 5999999999888887766
Q ss_pred HHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhh--hhhHHHHHHHHHHHHHHHHHHHH
Q 010375 366 IVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLET--RSAGQSITVAVNLFFTFVIAQIF 443 (512)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~g~~~~~~~~g~~~~~~~~ 443 (512)
++.+.. +..+.......+.+.+.+. ..+....+..|.+|++. +..+.++.+...++|..++|.+.
T Consensus 104 l~~~~~------------~~~~~l~~~~~l~gig~g~-~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~ 170 (500)
T PRK09584 104 LVAWSG------------HDAGIVYMGMATIAVGNGL-FKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLAT 170 (500)
T ss_pred HHHHhc------------ccHHHHHHHHHHHHHhhhc-ccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHH
Confidence 555421 1122233333444444443 33444567789997643 45678888999999999999999
Q ss_pred HHHHhhcchhhHHHHHHHHHHHH
Q 010375 444 LTLLCSFKFGIFLFFAGWVTIMT 466 (512)
Q Consensus 444 ~~~~~~~g~~~~~~~~~~~~~~~ 466 (512)
+++.+..+|...+...++..+.+
T Consensus 171 g~l~~~~g~~~~F~i~~i~~~i~ 193 (500)
T PRK09584 171 PWLAAKYGWSVAFALSVVGMLIT 193 (500)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHH
Confidence 99999888877666655444433
|
|
| >TIGR00898 2A0119 cation transport protein | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.3e-09 Score=109.50 Aligned_cols=137 Identities=22% Similarity=0.124 Sum_probs=111.8
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchH--HHHHHHHHHHhhhhhhccchhhhhhhhcC
Q 010375 88 FTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANL--AMLLTGRILLGVGIGFGNQAVPLYLSEMA 165 (512)
Q Consensus 88 ~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~--~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 165 (512)
......+...++.++.+++.||+|||+.+.++.++.+++.++..+.++. +..++.-++.+++.+..++....+..|.+
T Consensus 360 ~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 439 (505)
T TIGR00898 360 DLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELY 439 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 3344556778889999999999999999999999999888888777654 45555666777777777888899999999
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhccCCCh
Q 010375 166 PTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETP 228 (512)
Q Consensus 166 ~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p 228 (512)
|++.|++++++......+|.+++|.+.. ....++..++++.++.+++..++.+++||+.
T Consensus 440 p~~~r~~~~g~~~~~~~ig~~i~p~i~~----~~~~~~~~~~~~~~~~~~~~~~~~~~lpet~ 498 (505)
T TIGR00898 440 PTVVRNLGVGVCSTMARVGSIISPFLVY----LGEKWLFLPLVLFGGLALLAGILTLFLPETK 498 (505)
T ss_pred cHHHHhhhHhHHHHHHHHHHHHHhHHHH----HHHHHHhhHHHHHHHHHHHHHHHHHcCcCCC
Confidence 9999999999999999999999999843 2334567788888888888877778889875
|
|
| >PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1 | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.9e-07 Score=87.67 Aligned_cols=343 Identities=12% Similarity=0.018 Sum_probs=185.9
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhh--------c----hHH---HHHHHHHHHhhh
Q 010375 85 LAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAA--------A----NLA---MLLTGRILLGVG 149 (512)
Q Consensus 85 ~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--------~----~~~---~l~~~r~l~G~~ 149 (512)
.+...-.-.+..++.++..|.+.||..|.+++..+.+.--++..++... + +-+ .+++.-.+.|.-
T Consensus 40 ~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i 119 (432)
T PF06963_consen 40 VSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAI 119 (432)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHH
Confidence 3444444556778888999999999999998877765554433332211 1 112 222222222221
Q ss_pred hhhccch-hhhhhhhcC------CCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhh
Q 010375 150 IGFGNQA-VPLYLSEMA------PTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGI 222 (512)
Q Consensus 150 ~~~~~~~-~~~~i~~~~------~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~ 222 (512)
.-..... ..++=-||. +++.+.+.++...-.--+.-+++|++ .+......+.+....+.++..++..+.=+
T Consensus 120 ~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~--vG~l~t~~s~~~~~~~i~~~N~~S~~vEy 197 (432)
T PF06963_consen 120 ERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLF--VGLLMTFASPVIAAIFIAGWNLASVFVEY 197 (432)
T ss_pred HHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHH--HHHHhhccCHHHHHHHHHHHHHHHHHHHH
Confidence 1111111 111123443 34456777888888888899999999 66666666788777777777766654432
Q ss_pred c----c-CCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHH
Q 010375 223 L----L-PETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQI 297 (512)
Q Consensus 223 ~----~-~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (512)
+ + ...| .+..+++.++..+..... ...+...+....+...+.-++....|+..++.+.....+-..++ +
T Consensus 198 ~~l~~VY~~~P-~L~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vflas~alalL----Y 271 (432)
T PF06963_consen 198 FLLARVYNSVP-ALAVKKRSSESESSSDEE-SSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLASFALALL----Y 271 (432)
T ss_pred HHHHHHHHhCh-HhcCCCCCcccccccccc-ccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHHHHHHHHHH----H
Confidence 2 1 2222 122222221111100000 00000000011111111112224455555555443322222222 2
Q ss_pred hhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCC
Q 010375 298 LTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGP 377 (512)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (512)
++ ...+...+..|+...|+++...+..-....+.++.+.++..++.+|+|..+.-.++......++.+..........+
T Consensus 272 ~T-VLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~ 350 (432)
T PF06963_consen 272 FT-VLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSP 350 (432)
T ss_pred HH-HhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 21 22234455566677799999999999999999999999999999999998888888776666555554433221110
Q ss_pred CcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHH
Q 010375 378 NQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIA 440 (512)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~ 440 (512)
. +.......+..+.+.-.+.- ++-....-+++|..|+++||+..|.-+..+++...+.-
T Consensus 351 ~---~~~s~~~l~~gi~~SR~GLW-~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~ 409 (432)
T PF06963_consen 351 F---SSISAYLLLGGIALSRIGLW-SFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSF 409 (432)
T ss_pred c---hhhHHHHHHHHHHHHHHHHH-hhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHH
Confidence 0 11122223333333333222 22223345678999999999999999999888765543
|
It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane |
| >TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family | Back alignment and domain information |
|---|
Probab=99.08 E-value=4.7e-09 Score=101.57 Aligned_cols=141 Identities=15% Similarity=0.022 Sum_probs=107.8
Q ss_pred ccCcchhHHHHHHHH-HHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHh------hchHHHHHHHHHHHhhhhh
Q 010375 79 KYDNQGLAAFTSSLY-LAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAA------AANLAMLLTGRILLGVGIG 151 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~-l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~------~~~~~~l~~~r~l~G~~~~ 151 (512)
|++.+++|++..... ....++.++.|++.||+|+|+.+..+.++.++..+.... .++...++....+.+++.+
T Consensus 239 G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 318 (390)
T TIGR02718 239 GWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITG 318 (390)
T ss_pred CCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHH
Confidence 889999999988876 466778999999999999999988877665333332221 1233444555566677777
Q ss_pred hccchhhhhhhhcCCC-CCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHh
Q 010375 152 FGNQAVPLYLSEMAPT-HLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGG 221 (512)
Q Consensus 152 ~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~ 221 (512)
...+...+.+.+..++ +++++.+++.+...++|..++|.+ .+...+..||+..|++.++..++..+..
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~--~G~l~~~~G~~~~f~~~~~~~l~a~~~~ 387 (390)
T TIGR02718 319 ITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSI--AGYLTDRFGYAGGFLSGTVLAVLAILLA 387 (390)
T ss_pred HHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHccHHHHHHHHHHHHHHHHHh
Confidence 7777888887788776 788999999999999999999999 5565666789999998887776665443
|
RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes. |
| >PRK10406 alpha-ketoglutarate transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=5.9e-09 Score=102.23 Aligned_cols=146 Identities=10% Similarity=-0.017 Sum_probs=92.1
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHH--h--hchHHHHHHHHHHHhhhhhhcc
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNA--A--AANLAMLLTGRILLGVGIGFGN 154 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~--~--~~~~~~l~~~r~l~G~~~~~~~ 154 (512)
|.+..+.+...+...++..+++++.|+++||+|||+.+..+.++.++..+... . .++....+..-.+.+.+.+...
T Consensus 275 g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (432)
T PRK10406 275 GMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYT 354 (432)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHH
Confidence 67888889989888888899999999999999999988776654433332111 1 2233222222222223333344
Q ss_pred chhhhhhhhcCCCCCchhHHHHHHHHHHH-HHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhccCC
Q 010375 155 QAVPLYLSEMAPTHLRGGLNMMFQLATTL-GIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPE 226 (512)
Q Consensus 155 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~l-G~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e 226 (512)
+....++.|++|++.|+.++|+......+ .....|.+. ........|...++..++..++..+..+++++
T Consensus 355 ~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~--~~l~~~g~~~~~~~~~~~~~~i~~~~~~~l~~ 425 (432)
T PRK10406 355 SISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVA--LSLKSIGMETAFFWYVTLMAVVAFLVSLMLHR 425 (432)
T ss_pred HHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHH--HHHHHhCCCcHHHHHHHHHHHHHHHHHHHhhh
Confidence 45667889999999999999998765443 233466653 22222223656666666666666655555443
|
|
| >TIGR00805 oat sodium-independent organic anion transporter | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.7e-09 Score=109.84 Aligned_cols=159 Identities=13% Similarity=-0.073 Sum_probs=113.8
Q ss_pred HHHHHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHH
Q 010375 290 IFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSI 369 (512)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~ 369 (512)
..+..+.............+.+-++++++..+.|++.+...++..++.++.+++.||.+||+.+.++.++.+++.++..+
T Consensus 38 ~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~al 117 (633)
T TIGR00805 38 LTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSL 117 (633)
T ss_pred HHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhC
Confidence 33344444333445555667777779999999999999999999999999999999999999999999999988888766
Q ss_pred HHhhccCC----------------------C-------------ccccc--c-hhhHHHHHHHHHHHHhhhcccceeeee
Q 010375 370 ILGLKFGP----------------------N-------------QELSK--S-FSILVVVVICLFVLAFGWSWGPLGWTV 411 (512)
Q Consensus 370 ~~~~~~~~----------------------~-------------~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (512)
........ . ..... . ....+++.-++.+.+.+ ...++...+
T Consensus 118 phf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~-~~~~~~~~~ 196 (633)
T TIGR00805 118 PHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGAT-PIFPLGISY 196 (633)
T ss_pred hHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCC-cchhcCchh
Confidence 53211000 0 00000 0 11223334444444443 334556789
Q ss_pred ecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 010375 412 PSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCS 449 (512)
Q Consensus 412 ~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~ 449 (512)
+.|.+|++.|+...|+.+....+|..+++.+.+.+.+.
T Consensus 197 i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~ 234 (633)
T TIGR00805 197 IDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQI 234 (633)
T ss_pred hhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999988754
|
Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange. |
| >KOG3762 consensus Predicted transporter [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.06 E-value=1e-09 Score=103.23 Aligned_cols=156 Identities=13% Similarity=0.085 Sum_probs=118.5
Q ss_pred chhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCc
Q 010375 300 GINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQ 379 (512)
Q Consensus 300 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (512)
+.....+++=..+++.+..+..-|........+.++.-++.+++.+|+|+-+++.++..+..+-++.+...
T Consensus 386 g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L--------- 456 (618)
T KOG3762|consen 386 GVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYL--------- 456 (618)
T ss_pred HHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHh---------
Confidence 33444555545567777777777888888889999999999999999999999988887777766666554
Q ss_pred ccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHH-HHHHHHHHHHHHHHHhhcchhhHHHH
Q 010375 380 ELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVN-LFFTFVIAQIFLTLLCSFKFGIFLFF 458 (512)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~-~~g~~~~~~~~~~~~~~~g~~~~~~~ 458 (512)
.++|..+.+=.+-+...+..+..+ .+|++...||+.+.++.++..... .+|-.+|..+.|.+.+.++....+-.
T Consensus 457 ----~n~W~vLPieilqgit~aliWaa~-~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~ 531 (618)
T KOG3762|consen 457 ----QNPWMVLPIEILQGITHALIWAAI-ISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRI 531 (618)
T ss_pred ----cCchheeeHHHHHHHHHHHHHHHH-HHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHH
Confidence 446777777788888888777776 488899999999999999988765 47788899999999988885554444
Q ss_pred HHHHHHHHHHH
Q 010375 459 AGWVTIMTIFV 469 (512)
Q Consensus 459 ~~~~~~~~~~~ 469 (512)
.++..++.++.
T Consensus 532 ~giAcl~~l~~ 542 (618)
T KOG3762|consen 532 FGIACLVTLAL 542 (618)
T ss_pred HHHHHHHHHHH
Confidence 44444333333
|
|
| >KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.05 E-value=2e-10 Score=106.12 Aligned_cols=179 Identities=11% Similarity=-0.004 Sum_probs=130.3
Q ss_pred HHHHHHHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHH
Q 010375 288 MAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIV 367 (512)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~ 367 (512)
..+++....+..--+.+....+...+.++.+....|++.....+...++++++|++.||++|++++.+|..+-.++.+..
T Consensus 36 ~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~ 115 (493)
T KOG1330|consen 36 VILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFAS 115 (493)
T ss_pred HHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHH
Confidence 33334344343333444444555555589999999999999999999999999999999999999999988888877777
Q ss_pred HHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010375 368 SIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLL 447 (512)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~ 447 (512)
.+... -|.+++.-.+.+.+-+ .+.|+...+++|.+|.++|+++.++.+....+|+.+|-.+...+.
T Consensus 116 ~fs~~-------------Fwq~~l~R~~vGiGeA-s~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va 181 (493)
T KOG1330|consen 116 GFSNH-------------FWQVLLCRGFVGIGEA-SYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVA 181 (493)
T ss_pred HHHHH-------------HHHHHHHHHHhccchh-hhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeec
Confidence 66532 3444555555555544 567777899999999999999999999999999988887777776
Q ss_pred hhcc-hhh-HHHHHHHHHHHHHHHhhccccCCCCC
Q 010375 448 CSFK-FGI-FLFFAGWVTIMTIFVYFFLPETKGVP 480 (512)
Q Consensus 448 ~~~g-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (512)
+..+ |.. +...+++..+++++..++.+|.+++.
T Consensus 182 ~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga 216 (493)
T KOG1330|consen 182 SLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGA 216 (493)
T ss_pred cCccceEEEEEeehHHHHHHHHHHHhhccCccccc
Confidence 6655 433 33444455555666667777766543
|
|
| >KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.05 E-value=3e-08 Score=95.06 Aligned_cols=147 Identities=14% Similarity=0.115 Sum_probs=111.5
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhc---hHH------HHHHHHHHHhhh
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAA---NLA------MLLTGRILLGVG 149 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~---~~~------~l~~~r~l~G~~ 149 (512)
|++..+..+..........++.+++..+.||+|||+.++.+..+..+..+++.... +.. ..+++.++..++
T Consensus 301 G~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~ 380 (485)
T KOG0569|consen 301 GFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIIS 380 (485)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Confidence 88999999999999999999999999999999999999999999988888776541 111 123344443333
Q ss_pred hhh-ccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhc-cCCC
Q 010375 150 IGF-GNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGIL-LPET 227 (512)
Q Consensus 150 ~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~-~~e~ 227 (512)
.+. .-|...-+.+|.+|++.|+.++++.....-+...+-... .....+..|= +.|++..+++++..+..++ +|||
T Consensus 381 f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~--fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPET 457 (485)
T KOG0569|consen 381 FAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFA--FPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPET 457 (485)
T ss_pred hhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHH--HHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCccc
Confidence 332 357788889999999999999999988888887766665 3333333343 6777788888777666655 9999
Q ss_pred h
Q 010375 228 P 228 (512)
Q Consensus 228 p 228 (512)
.
T Consensus 458 k 458 (485)
T KOG0569|consen 458 K 458 (485)
T ss_pred C
Confidence 5
|
|
| >COG2270 Permeases of the major facilitator superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.05 E-value=3.3e-09 Score=97.45 Aligned_cols=152 Identities=11% Similarity=0.112 Sum_probs=131.0
Q ss_pred CCccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhcc
Q 010375 75 NNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGN 154 (512)
Q Consensus 75 ~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 154 (512)
.+++|++..+..++.....+..++|++++|++.||+|.|+++..+++++.+.++..-+...-..+.++-.+.|...|+.+
T Consensus 280 ~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~q 359 (438)
T COG2270 280 AADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQ 359 (438)
T ss_pred HHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHH
Confidence 44679999999999999999999999999999999999999999999999999888887776777788899999999999
Q ss_pred chhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhccCCC
Q 010375 155 QAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPET 227 (512)
Q Consensus 155 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~ 227 (512)
..+.++..+..|+++-++.+|++....-.+..+||.+-....... .+-|.-+....++..+.+++.+.+|+.
T Consensus 360 A~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iT-g~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 360 ASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQIT-GSSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHh-cchhhHHHHHHHHHHhhHhhEEeecCC
Confidence 999999999999999999999999999999999999843333332 246777777777777777777777654
|
|
| >PRK11902 ampG muropeptide transporter; Reviewed | Back alignment and domain information |
|---|
Probab=99.04 E-value=8.7e-09 Score=100.05 Aligned_cols=171 Identities=13% Similarity=0.083 Sum_probs=117.2
Q ss_pred HHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhc-----CChh-HHHHhhHHHHHHHHHH
Q 010375 294 MFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKL-----GRRA-LLISGGIQMITCQVIV 367 (512)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----~~r~-~~~~~~~~~~~~~~~~ 367 (512)
++.+...+.....-+|.++++.|++.++.+++...... .+..++.|+++||+ |||| .+..+.+..+++...+
T Consensus 8 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l 85 (402)
T PRK11902 8 GFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAM 85 (402)
T ss_pred HHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHH
Confidence 44444556777778899999999999999988666554 58889999999999 7765 5666666666665555
Q ss_pred HHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010375 368 SIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLL 447 (512)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~ 447 (512)
.+.. +....+......++.... .....+...+++.|..|+++|+++.++......+|..+++.+.+.+.
T Consensus 86 ~~~~----------~~~~~~~l~~~~~~~~~~-~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~ 154 (402)
T PRK11902 86 AFCP----------PHAALWPLAGLAVLVAFL-SASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLA 154 (402)
T ss_pred HhcC----------ccchHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 4321 111122233332333333 33344555678899999999999999999998999999999998888
Q ss_pred hh-cchhhHHHHHHHHHHHHHHHhhccccCC
Q 010375 448 CS-FKFGIFLFFAGWVTIMTIFVYFFLPETK 477 (512)
Q Consensus 448 ~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (512)
+. .+|...+.+.++..+...+..+..+|++
T Consensus 155 ~~~~gw~~~f~i~a~~~l~~~l~~~~~~e~~ 185 (402)
T PRK11902 155 DRVLGWGNTYLLMAGLMLAGALTTLWAPEPE 185 (402)
T ss_pred hcccCHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 85 4777666665555444444445555543
|
|
| >TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter | Back alignment and domain information |
|---|
Probab=99.03 E-value=9e-09 Score=101.36 Aligned_cols=113 Identities=21% Similarity=0.271 Sum_probs=96.2
Q ss_pred CcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhh-chHHHHHHHHHHHhhhhhhccchhhh
Q 010375 81 DNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAA-ANLAMLLTGRILLGVGIGFGNQAVPL 159 (512)
Q Consensus 81 s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~~~~~~ 159 (512)
+..+.+++.+...++..++.+++++++||+|+|+++..+.++.+++.++..+. ++.+.+++..++.|++.+...+...+
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 334 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWA 334 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45567788888899999999999999999999999999998888888777665 45677778888999999988889999
Q ss_pred hhhhcCC-------CCCchhHHHHHHHHHHHHHHHHHHHHH
Q 010375 160 YLSEMAP-------THLRGGLNMMFQLATTLGIFTANMINY 193 (512)
Q Consensus 160 ~i~~~~~-------~~~r~~~~~~~~~~~~lG~~~~~~~~~ 193 (512)
+++|..+ ++++|.+.++.+....+|..+++.+..
T Consensus 335 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g 375 (437)
T TIGR00792 335 LVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVG 375 (437)
T ss_pred HHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988865 456799999999999999999998843
|
GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners. |
| >KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.01 E-value=2.2e-09 Score=96.59 Aligned_cols=146 Identities=14% Similarity=0.021 Sum_probs=103.3
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHH
Q 010375 318 KGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFV 397 (512)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (512)
+..-+|++-+.+.+..++.++..|.++||+|||.++..+.+..++...+.+... ....++..=+.+
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~--------------~F~afv~aR~l~ 131 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSR--------------NFAAFVLARFLG 131 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHhh
Confidence 445678899999999999999999999999999999999888888666665532 111222211222
Q ss_pred HHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHh---hcchhhH---HHHHHHHHHH-HHHHh
Q 010375 398 LAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLC---SFKFGIF---LFFAGWVTIM-TIFVY 470 (512)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~---~~g~~~~---~~~~~~~~~~-~~~~~ 470 (512)
..+. +...+..++++|++++++|+.+++.+.+...+|.++||.+.|++.. ..+...+ .++..+.... ..+..
T Consensus 132 Gi~k-gnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~ 210 (451)
T KOG2615|consen 132 GIFK-GNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFP 210 (451)
T ss_pred hhcc-CchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHH
Confidence 2222 3334557899999999999999999999999999999999999877 3442222 2222222222 34555
Q ss_pred hccccCCC
Q 010375 471 FFLPETKG 478 (512)
Q Consensus 471 ~~~~~~~~ 478 (512)
+++||+-.
T Consensus 211 ~~lpETL~ 218 (451)
T KOG2615|consen 211 WFLPETLP 218 (451)
T ss_pred HhCCcccc
Confidence 77888743
|
|
| >PTZ00207 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=2.4e-08 Score=99.02 Aligned_cols=166 Identities=11% Similarity=0.090 Sum_probs=107.6
Q ss_pred hhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcc
Q 010375 301 INSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQE 380 (512)
Q Consensus 301 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (512)
.+.+..+.+.+.+++|++..+.+....... ......++.|++.||+|+|+++.++.++..++.++..+.....
T Consensus 43 ~y~fsv~s~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~------ 115 (591)
T PTZ00207 43 MYAFNLISGAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEV------ 115 (591)
T ss_pred HHHHHHHHHHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhccc------
Confidence 456677888888889999998888776533 3334666789999999999999999999998888777642100
Q ss_pred cccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHH
Q 010375 381 LSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAG 460 (512)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~ 460 (512)
...+.+.+.+..++.+.+.+...... ...+.+.+| ++||.+.|+......+|+++.+.+...+........+++.+.
T Consensus 116 -i~~s~~~l~l~r~l~G~G~~~~~~~~-~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~~~~~~fl~l~v 192 (591)
T PTZ00207 116 -IEGSVVRLSVYNGLMTLGCMLFDLGA-VVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSDNTSAYFFFLMS 192 (591)
T ss_pred -ccCcHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 00123333444444444433222222 345567887 789999999999999999875555555443222233444455
Q ss_pred HHHHHHHHHhhccccC
Q 010375 461 WVTIMTIFVYFFLPET 476 (512)
Q Consensus 461 ~~~~~~~~~~~~~~~~ 476 (512)
+..+.+++...+++..
T Consensus 193 l~~vv~ll~~~~vr~p 208 (591)
T PTZ00207 193 FALVVGILAIVFMRLP 208 (591)
T ss_pred HHHHHHHHHHhheeCC
Confidence 5555555555555443
|
|
| >PRK10133 L-fucose transporter; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=2.4e-08 Score=97.71 Aligned_cols=147 Identities=11% Similarity=-0.023 Sum_probs=109.2
Q ss_pred HHHHHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHH
Q 010375 290 IFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSI 369 (512)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~ 369 (512)
..+.++.............|.+.+++|.++.+.++......++..++.++.|++.||+|||+.+..+..+..++.+++..
T Consensus 31 ~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~ 110 (438)
T PRK10133 31 LCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWP 110 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence 33444444445567777889887789999999999999999999999999999999999999999999888888766532
Q ss_pred HHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010375 370 ILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLL 447 (512)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~ 447 (512)
... .++.+..+....+.+.+.+...... ..++.|..|++.+....++.+....+|..+++.+.+.+.
T Consensus 111 ~~~----------a~~~~~ll~~r~l~G~g~g~~~~~~-~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 111 AAE----------IMNYTLFLVGLFIIAAGLGCLETAA-NPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHh----------cCCHHHHHHHHHHHHHHHHHHHhhH-HHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 210 1223344455556666666444443 455667777776767889999999999999998877654
|
|
| >PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] | Back alignment and domain information |
|---|
Probab=99.01 E-value=7.1e-09 Score=97.30 Aligned_cols=147 Identities=15% Similarity=0.152 Sum_probs=124.7
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhh
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVP 158 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 158 (512)
+.++...|.+.+...+.-++...+..++.+|+|.|+.++++..+.++=.++++++++.+.+.+.+.+.|+-.+.......
T Consensus 255 ~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~f 334 (412)
T PF01306_consen 255 GQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAF 334 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 34667899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCCCchhHHHH-HHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhc-cCCC
Q 010375 159 LYLSEMAPTHLRGGLNMM-FQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGIL-LPET 227 (512)
Q Consensus 159 ~~i~~~~~~~~r~~~~~~-~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~-~~e~ 227 (512)
.|+++.+|+|-.++...+ .+.+.++|..+.+.+ .+...++.|.+..|++.+.+.++..++..+ +++.
T Consensus 335 kYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~--~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~ 403 (412)
T PF01306_consen 335 KYITAHFDKRLSATLYLVGFQFAKQIGIIILSPL--AGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKD 403 (412)
T ss_dssp HHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--S
T ss_pred HHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhh--HHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCC
Confidence 999999998877677666 467888999988888 677778889999999988887777666655 5443
|
The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A. |
| >TIGR01272 gluP glucose/galactose transporter | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.3e-08 Score=94.36 Aligned_cols=130 Identities=12% Similarity=0.057 Sum_probs=103.8
Q ss_pred ccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccch
Q 010375 77 YCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQA 156 (512)
Q Consensus 77 ~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 156 (512)
.+|+++.+.+...+.+..+..++.+..+++.||+|+|+++.++..+..++.++....++... ..+-++.|++.+..+|.
T Consensus 172 ~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~-~~~~~l~g~~~s~i~P~ 250 (310)
T TIGR01272 172 ALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVA-MWFVLALGLFNSIMFPT 250 (310)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHHHHHHHH
Confidence 35889999999999999999999999999999999999998888888887766666554433 33556899999999999
Q ss_pred hhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhH
Q 010375 157 VPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAA 211 (512)
Q Consensus 157 ~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~ 211 (512)
..+...+..|++ .+.+.++. ....+|.++.|++ .+...+..|.+..|++..
T Consensus 251 ~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l--~G~lad~~g~~~a~~v~~ 301 (310)
T TIGR01272 251 IFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLL--QGSLADCLGIQLAFALPV 301 (310)
T ss_pred HHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHH--HHHHHHhccchHHHHHHH
Confidence 999999988754 45666665 4566899999988 555556667788877433
|
Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity. |
| >TIGR00880 2_A_01_02 Multidrug resistance protein | Back alignment and domain information |
|---|
Probab=98.99 E-value=2.4e-09 Score=86.91 Aligned_cols=133 Identities=15% Similarity=0.164 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccce
Q 010375 328 MTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPL 407 (512)
Q Consensus 328 ~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (512)
...++.+++.+..+++.||++||+.+..+.....++.+..... ...+.......+.+.+.+.. .+.
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~g~~~~~~-~~~ 71 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALS-------------SNITVLIIARFLQGFGAAFA-LVA 71 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHh-------------ccHHHHHHHHHHHHHHHHHH-HHh
Confidence 4567788899999999999999999888877766665554432 11233344444455444433 344
Q ss_pred eeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHH-HHHHHHHhhccc
Q 010375 408 GWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWV-TIMTIFVYFFLP 474 (512)
Q Consensus 408 ~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~ 474 (512)
...+..|.+|+++|+++.++.+....++..++|.+.+.+.+..++...+...... .+..+......|
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (141)
T TIGR00880 72 GAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLP 139 (141)
T ss_pred HHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCC
Confidence 4577789999999999999999999999999999999998887775544444433 333333333333
|
|
| >PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=98.99 E-value=9.2e-09 Score=114.01 Aligned_cols=137 Identities=15% Similarity=0.075 Sum_probs=115.6
Q ss_pred ccCcc-hhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchh
Q 010375 79 KYDNQ-GLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAV 157 (512)
Q Consensus 79 ~~s~~-~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 157 (512)
|++.. +.+++.+...++.+++++++|+++||+++|+++.++.++.+++.++..+.++.+.+++..++.|++.+...+..
T Consensus 264 g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 343 (1146)
T PRK08633 264 GLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVPL 343 (1146)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHH
Confidence 77888 99999999999999999999999999999999999988888888888888899888899999999999998899
Q ss_pred hhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHH
Q 010375 158 PLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALM 216 (512)
Q Consensus 158 ~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~ 216 (512)
.+++.+..|+++|++++++.+....+|.++++.++..... ...++...|++.+.+.++
T Consensus 344 ~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~ 401 (1146)
T PRK08633 344 NALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSG-LGLSPAGLFYLIALVTLI 401 (1146)
T ss_pred HHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hccCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999888777432221 234566666665554433
|
|
| >TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) | Back alignment and domain information |
|---|
Probab=98.98 E-value=2e-07 Score=94.29 Aligned_cols=145 Identities=14% Similarity=0.193 Sum_probs=115.5
Q ss_pred cccCcchhHHHHHHHHHHHHHHHHhhhhhhhh-hchhHHHHHHHHHHHHHHHHHHhhch--------HHHHHHHHHHHhh
Q 010375 78 CKYDNQGLAAFTSSLYLAGLVASFVASPVTRD-YGRRASIICGGISFLLGAALNAAAAN--------LAMLLTGRILLGV 148 (512)
Q Consensus 78 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~--------~~~l~~~r~l~G~ 148 (512)
+|++.+....+...+....-+..+++|.++|+ +||++.+.++.++..++.++.+++.. ....+++-.+..+
T Consensus 18 lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~ 97 (654)
T TIGR00926 18 LGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIAL 97 (654)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHh
Confidence 47788888899999998889999999999996 69999999999999999988877521 2346677888889
Q ss_pred hhhhccchhhhhhhhcCCCCC---chhHHHHHHHHHHHHHHHHHHHHHhhc-cc----CCCchhHHHHhhHHHHHHHHHH
Q 010375 149 GIGFGNQAVPLYLSEMAPTHL---RGGLNMMFQLATTLGIFTANMINYGTQ-KL----ETWGWRLSLGLAAAPALMMTVG 220 (512)
Q Consensus 149 ~~~~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~lG~~~~~~~~~~~~-~~----~~~~Wr~~f~~~~~~~~~~~~~ 220 (512)
|.|+.-+...+...|.+++++ |-..+.++..+.++|.++++++..... .. ...+|...|.+.++..++.+++
T Consensus 98 G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lv 177 (654)
T TIGR00926 98 GTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIV 177 (654)
T ss_pred hccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHH
Confidence 999999999999999997543 567888888899999998887732221 11 2346999999988888777665
Q ss_pred hh
Q 010375 221 GI 222 (512)
Q Consensus 221 ~~ 222 (512)
..
T Consensus 178 f~ 179 (654)
T TIGR00926 178 FM 179 (654)
T ss_pred HH
Confidence 53
|
|
| >PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.9e-08 Score=111.16 Aligned_cols=146 Identities=12% Similarity=0.073 Sum_probs=100.9
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHH
Q 010375 320 DASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLA 399 (512)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (512)
...++..+...+..++.++++|+++||++||+++.....+..+.......... ....+.+++..++.+.+
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~----------~~s~~~l~~~~~l~gi~ 121 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFH----------LNSVPLLFAALFLMGIH 121 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHH----------HhhHHHHHHHHHHHHHH
Confidence 34566777788888999999999999999999764422222222111111110 01234445555555555
Q ss_pred hhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhhccccC
Q 010375 400 FGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLPET 476 (512)
Q Consensus 400 ~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (512)
.+ .+.|...+++.+.+|+++++.++|+.++...+|..++|.+.|.+.+..++...++..++..+.++++.+.++++
T Consensus 122 ~a-~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (1140)
T PRK06814 122 SA-LFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWLASLFIPKT 197 (1140)
T ss_pred HH-hhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 44 44566678889999999999999999999999999999999999998887766655555555555555556554
|
|
| >PRK15075 citrate-proton symporter; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.7e-08 Score=97.67 Aligned_cols=168 Identities=15% Similarity=0.120 Sum_probs=106.3
Q ss_pred HHHHHHHHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHH-HHH-----HHHHHHHHHHHHHHHhhcCChhHHHHhhHHH
Q 010375 287 VMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSS-AMT-----GAVLASSTLISIATVDKLGRRALLISGGIQM 360 (512)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~-----~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~ 360 (512)
....++..+....-...+....|.+.++++.+..+.+... +.. .+...++.++.|++.||+|||+.+..+..+.
T Consensus 17 ~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~ 96 (434)
T PRK15075 17 ILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIM 96 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHH
Confidence 4445555666666667788889999888888766643322 211 2222467889999999999999999998887
Q ss_pred HHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHH
Q 010375 361 ITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIA 440 (512)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~ 440 (512)
.++..+..+..... ..........++.-++.+.+.+...... ..++.|.+|+++|+++.++.....+++..+++
T Consensus 97 ~~~~~l~~~~~~~~-----~~~~~~~~~l~~~R~l~G~~~g~~~~~~-~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~ 170 (434)
T PRK15075 97 ASGTLLIAFVPGYA-----TIGLAAPLLVLLGRLLQGFSAGVELGGV-SVYLAEIATPGRKGFYTSWQSASQQVAVVFAA 170 (434)
T ss_pred HHHHHHHHhCCcHH-----HHHHHHHHHHHHHHHHhhccccccHHHH-HHHHHhhCCcccchHHHHHHHHHHHHHHHHHH
Confidence 77776665531100 0000000112333334444444333223 46788999999999999999988888887777
Q ss_pred HHHHHHH--------hhcchhhHHHHHH
Q 010375 441 QIFLTLL--------CSFKFGIFLFFAG 460 (512)
Q Consensus 441 ~~~~~~~--------~~~g~~~~~~~~~ 460 (512)
.+.+.+. +..+|...+.+.+
T Consensus 171 ~~g~~l~~~~~~~~~~~~gWr~~f~~~~ 198 (434)
T PRK15075 171 LLGYLLNQWLSPAQMAEWGWRIPFLIGC 198 (434)
T ss_pred HHHHHHHHhCCHHHHhccchHHHHHHHH
Confidence 7766553 3556665555543
|
|
| >TIGR00901 2A0125 AmpG-related permease | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.9e-08 Score=96.08 Aligned_cols=162 Identities=15% Similarity=0.131 Sum_probs=105.8
Q ss_pred hHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhc-----CChhHH-HHhhHHHHHHHHHHHHHHhhcc
Q 010375 302 NSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKL-----GRRALL-ISGGIQMITCQVIVSIILGLKF 375 (512)
Q Consensus 302 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----~~r~~~-~~~~~~~~~~~~~~~~~~~~~~ 375 (512)
.......|.+.++.|+|..+.+..... .+...+ .++.|+++||+ ||||.+ ..+.+...++...+.+..
T Consensus 5 ~~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~---- 78 (356)
T TIGR00901 5 GLVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLV---- 78 (356)
T ss_pred hhHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCC----
Confidence 345566788889999999999888654 444444 88999999998 788865 444444444433333211
Q ss_pred CCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc----
Q 010375 376 GPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK---- 451 (512)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g---- 451 (512)
+....+.......+...+.+ ...+...+++.|.+|+++|+.+.++......+|..+++.+.+.+.+..+
T Consensus 79 ------~~~~l~~l~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~ 151 (356)
T TIGR00901 79 ------PSTDLPLLAGLAFLIAFFSA-TQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTG 151 (356)
T ss_pred ------cchhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc
Confidence 11112222222222332222 3334445778899999999999999999999999999999998888877
Q ss_pred ----hhhHHHHHHHHHHHHHHHhh-ccccC
Q 010375 452 ----FGIFLFFAGWVTIMTIFVYF-FLPET 476 (512)
Q Consensus 452 ----~~~~~~~~~~~~~~~~~~~~-~~~~~ 476 (512)
|...+.+.++..+...+..+ ..||+
T Consensus 152 ~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~ 181 (356)
T TIGR00901 152 LITLWGYIFFWTALLILPGLLVTLFLAKEP 181 (356)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 76666666665555444433 34554
|
|
| >TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter | Back alignment and domain information |
|---|
Probab=98.93 E-value=5.5e-08 Score=94.33 Aligned_cols=148 Identities=12% Similarity=0.013 Sum_probs=98.6
Q ss_pred hhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHh----hcCChhHHHHh-hHHHHHHHHHHHHHHh
Q 010375 298 LTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVD----KLGRRALLISG-GIQMITCQVIVSIILG 372 (512)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----~~~~r~~~~~~-~~~~~~~~~~~~~~~~ 372 (512)
...+.....+.+.+++++|.+....+.......+.+++..++.|+++| |+|||+.++.. .....+++.++.....
T Consensus 17 q~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~ 96 (477)
T TIGR01301 17 QFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAAD 96 (477)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCch
Confidence 344566677777788899999999999999999999999999999999 59999988775 3444444444333211
Q ss_pred hcc--CCCcccccch--hhHHHHHHHHHHHHhhhcccceeeeeecccCChhhh--hhHHHHHHHHHHHHHHHHHHHHHHH
Q 010375 373 LKF--GPNQELSKSF--SILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETR--SAGQSITVAVNLFFTFVIAQIFLTL 446 (512)
Q Consensus 373 ~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~g~~~~~~~~g~~~~~~~~~~~ 446 (512)
... .......... .+..+..+.+..+.......|. .++++|..|+++| +.+.++.+....+|+.+++.+.+..
T Consensus 97 ~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~-rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~ 175 (477)
T TIGR01301 97 IGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPC-RAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYS 175 (477)
T ss_pred hhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHH-HHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 0000000000 1222333333444444444454 5788999998865 5789999999999999999888764
|
This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot. |
| >TIGR00896 CynX cyanate transporter | Back alignment and domain information |
|---|
Probab=98.92 E-value=2.2e-08 Score=95.59 Aligned_cols=135 Identities=11% Similarity=0.005 Sum_probs=99.8
Q ss_pred hhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcc
Q 010375 301 INSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQE 380 (512)
Q Consensus 301 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (512)
+......+|.+.+++|++..+.++..+...++..++.++.|+++||+|+|+.+..+.++..++.+.. ..
T Consensus 16 ~~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~---------- 84 (355)
T TIGR00896 16 LTSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SA---------- 84 (355)
T ss_pred cccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hh----------
Confidence 3445667888889999999999999999999999999999999999999999988877665554433 11
Q ss_pred cccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 010375 381 LSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK 451 (512)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g 451 (512)
+..+..+....+.+.+.+.... .....+.|.+| ++|+++.++.+....+|..+++.+.+.+.+..+
T Consensus 85 ---~~~~~l~~~~~~~g~g~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~ 150 (355)
T TIGR00896 85 ---PGTALLFAGTALIGVGIAIINV-LLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSG 150 (355)
T ss_pred ---ccHHHHHHHHHHHHHHHHHHhc-cchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 1123333334444444443222 22345567776 679999999999999999999999888877643
|
This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate. |
| >KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.1e-08 Score=100.47 Aligned_cols=145 Identities=13% Similarity=0.113 Sum_probs=130.9
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhc--hhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccch
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYG--RRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQA 156 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~G--rr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 156 (512)
+.+..+.+.+.++..+...++.++.|+++|+.. ++.+..+++++.+++.+.++++++++.++..-.+.|++.|.....
T Consensus 329 g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l 408 (509)
T KOG2504|consen 329 GLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSL 408 (509)
T ss_pred CCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999988 556778888999999999999999999999999999999999888
Q ss_pred hhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCc-hhHHHHhhHHHHHHHHHHhhccC
Q 010375 157 VPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWG-WRLSLGLAAAPALMMTVGGILLP 225 (512)
Q Consensus 157 ~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~-Wr~~f~~~~~~~~~~~~~~~~~~ 225 (512)
...++.|..+.++-..+.|+.....+++.++||++ .+...+..+ |...|+..++..++..++++..|
T Consensus 409 ~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPi--ag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 409 TPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPI--AGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHHHHcChhhcchHHHHHHHHhHHHHHcCccc--ceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 88899999999999999999999999999999999 455555544 99999999999888887777765
|
|
| >KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.87 E-value=1e-08 Score=94.82 Aligned_cols=114 Identities=18% Similarity=0.234 Sum_probs=92.3
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhh----hchhHHHH-HHHHHHHHHHHHHHhhchH-----------------
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRD----YGRRASII-CGGISFLLGAALNAAAANL----------------- 136 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr----~Grr~~l~-~~~~~~~~~~~~~~~~~~~----------------- 136 (512)
|++....+.+--..-+...+.+++.|..+|| |||||.++ .+.+...++.++.+++.++
T Consensus 63 Gvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai 142 (498)
T KOG0637|consen 63 GVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAI 142 (498)
T ss_pred CCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHH
Confidence 8888888988888888999999999999995 89986654 4666677777788877554
Q ss_pred HHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchh-HHHHHHHHHHHHHHHHHHHH
Q 010375 137 AMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGG-LNMMFQLATTLGIFTANMIN 192 (512)
Q Consensus 137 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~-~~~~~~~~~~lG~~~~~~~~ 192 (512)
..++++--+.-++.......+.+++.|...++++.+ +++++.....+|..+|..++
T Consensus 143 ~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g 199 (498)
T KOG0637|consen 143 VLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALG 199 (498)
T ss_pred HHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeecc
Confidence 345555566667777888899999999997766666 99999999999999998883
|
|
| >KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.85 E-value=4.2e-08 Score=95.08 Aligned_cols=149 Identities=15% Similarity=0.114 Sum_probs=118.3
Q ss_pred hcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHH
Q 010375 314 SMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVI 393 (512)
Q Consensus 314 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (512)
++++++.+.+++.+....+.+++.+..+++.||+|.|+++..+.++..++.++....... ..+..++.=
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~-----------~~~~~~~~R 135 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASI-----------GFYLLLVLR 135 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHh-----------cchhhHHHH
Confidence 367888899999999999999999999999999999999999999888888877776532 223456666
Q ss_pred HHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-cchhhHHHHHHHHH-HHHHHHhh
Q 010375 394 CLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCS-FKFGIFLFFAGWVT-IMTIFVYF 471 (512)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~-~g~~~~~~~~~~~~-~~~~~~~~ 471 (512)
++.+++.+..+..+ ..+..+-.|+++|++..++.....++|.+++.++.|.+.+. .||...+.+.+... +..++.++
T Consensus 136 ~lqGl~~g~~~pa~-~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~ 214 (466)
T KOG2532|consen 136 FLQGLGQGVLFPAI-GSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFL 214 (466)
T ss_pred HHhHHHHhHHHhhh-hceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHH
Confidence 66777777665555 57778999999999999999999999999999999999998 88766555555444 44444444
Q ss_pred ccc
Q 010375 472 FLP 474 (512)
Q Consensus 472 ~~~ 474 (512)
+..
T Consensus 215 ~~~ 217 (466)
T KOG2532|consen 215 FYS 217 (466)
T ss_pred Hhc
Confidence 444
|
|
| >PF03825 Nuc_H_symport: Nucleoside H+ symporter | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.4e-07 Score=90.22 Aligned_cols=146 Identities=17% Similarity=0.274 Sum_probs=115.9
Q ss_pred cCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhh-chHHHHH----HHHHHHhhhhhhcc
Q 010375 80 YDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAA-ANLAMLL----TGRILLGVGIGFGN 154 (512)
Q Consensus 80 ~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~l~----~~r~l~G~~~~~~~ 154 (512)
.+....+.+.+...++-.+.-...+++..|+|.|+++.++.+.+++=..+.+.. ++.+... +...++|+..+...
T Consensus 240 ~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~ 319 (400)
T PF03825_consen 240 YSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFH 319 (400)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHH
Confidence 566777888888889999999999999999999999999999999988888887 5544433 34567999999999
Q ss_pred chhhhhhhhcCCCCCchhHHHHHHH-HHHHHHHHHHHHHHhhcccCCC------chhHHHHhhHHHHHHHHHHhhc-cCC
Q 010375 155 QAVPLYLSEMAPTHLRGGLNMMFQL-ATTLGIFTANMINYGTQKLETW------GWRLSLGLAAAPALMMTVGGIL-LPE 226 (512)
Q Consensus 155 ~~~~~~i~~~~~~~~r~~~~~~~~~-~~~lG~~~~~~~~~~~~~~~~~------~Wr~~f~~~~~~~~~~~~~~~~-~~e 226 (512)
..+..++.+..|++.|+++.+++.. ..++|..+|..+ ++...+.+ .|...+.+.+++.++..+++++ .+|
T Consensus 320 ~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~i--gG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 320 AASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLI--GGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred HHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHH--HHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 9999999999999999999999876 468999999999 45554443 3555666666666665555444 444
Q ss_pred C
Q 010375 227 T 227 (512)
Q Consensus 227 ~ 227 (512)
+
T Consensus 398 ~ 398 (400)
T PF03825_consen 398 K 398 (400)
T ss_pred C
Confidence 3
|
|
| >KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=98.83 E-value=7.2e-09 Score=93.99 Aligned_cols=149 Identities=11% Similarity=0.047 Sum_probs=115.8
Q ss_pred cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHH
Q 010375 315 MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVIC 394 (512)
Q Consensus 315 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (512)
.+-+..+.|+++....+.+++.+++.|.+.||+|+|..+++|...+..+.+++.+.- ..+..+++=.
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~-------------sy~~l~vAR~ 167 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGN-------------SYPMLFVARS 167 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcc-------------hhHHHHHHHH
Confidence 455677899999999999999999999999999999999999999988888887752 2334555556
Q ss_pred HHHHHhhhcccceeeeeecccCChhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHH-HHHHHHHhhc
Q 010375 395 LFVLAFGWSWGPLGWTVPSEIFPLET-RSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWV-TIMTIFVYFF 472 (512)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~ 472 (512)
+-+.+.+.... ...+++++.+|++. |++++|+.-.+..+|..++|++.|.+++..|+...+++.+++ ++-+.+.++.
T Consensus 168 LQgvgsA~~~t-sglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~v 246 (464)
T KOG3764|consen 168 LQGVGSAFADT-SGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLV 246 (464)
T ss_pred HhhhhHHHHHh-hhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHhe
Confidence 66666654443 34678889998875 799999999999999999999999999999976655555544 4444444444
Q ss_pred cccCC
Q 010375 473 LPETK 477 (512)
Q Consensus 473 ~~~~~ 477 (512)
++.++
T Consensus 247 i~p~~ 251 (464)
T KOG3764|consen 247 IEPTE 251 (464)
T ss_pred eCccc
Confidence 44433
|
|
| >KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.83 E-value=2.9e-08 Score=89.03 Aligned_cols=133 Identities=14% Similarity=0.077 Sum_probs=100.6
Q ss_pred HHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCch
Q 010375 92 LYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRG 171 (512)
Q Consensus 92 ~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 171 (512)
..+...-|.++.+++.||+|||+.+..+.+++++..++.-.+.+-..+.+.-+..-++..+.+.+.+.|..|.+|.+-|+
T Consensus 390 tslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRa 469 (528)
T KOG0253|consen 390 TSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRA 469 (528)
T ss_pred HHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhh
Confidence 45667788999999999999999999999999999988877654333333333333344556678889999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhccCCCh
Q 010375 172 GLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETP 228 (512)
Q Consensus 172 ~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p 228 (512)
...|.-....-+|.++.|.++ .. ....-..+..+.+..+++..+...++|-.+
T Consensus 470 tgvGtcSsmaRIggI~~p~iA--~~--~e~s~sl~i~vy~~~~ilagIavcffPiEt 522 (528)
T KOG0253|consen 470 TGVGTCSSMARIGGIFSPVIA--MR--AELSTSLPIFVYGALFILAGIAVCFFPIET 522 (528)
T ss_pred cchhhhhhHHhhhhhhhhHHH--HH--hccceeehHHHHHHHHHHHHHHheeeeecc
Confidence 999999999999999999994 22 122233456667777777777777776443
|
|
| >TIGR00769 AAA ADP/ATP carrier protein family | Back alignment and domain information |
|---|
Probab=98.83 E-value=3.8e-05 Score=74.40 Aligned_cols=114 Identities=8% Similarity=-0.046 Sum_probs=86.5
Q ss_pred CcchhHHHHHHHHHHHHHH-HHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhh----c---------------------
Q 010375 81 DNQGLAAFTSSLYLAGLVA-SFVASPVTRDYGRRASIICGGISFLLGAALNAAA----A--------------------- 134 (512)
Q Consensus 81 s~~~~g~~~s~~~l~~~i~-~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~----~--------------------- 134 (512)
+.+.+.++-+...+..++. .++.+++++|++|++++......+.....++++. +
T Consensus 41 gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~ 120 (472)
T TIGR00769 41 GAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFM 120 (472)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhH
Confidence 3367889998888877666 8999999999999999888777776666665554 1
Q ss_pred ------hHHHHHHHHHHHhhhhhhccc-hhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHh
Q 010375 135 ------NLAMLLTGRILLGVGIGFGNQ-AVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYG 194 (512)
Q Consensus 135 ------~~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~ 194 (512)
+.|...+.-+...+-...... ....++.|.++.+|-.|..+++..+.++|.++++.+...
T Consensus 121 ~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~ 187 (472)
T TIGR00769 121 GFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKY 187 (472)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123333444455554455554 677889999999999999999999999999999987433
|
These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers. |
| >COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=98.83 E-value=1e-07 Score=89.17 Aligned_cols=135 Identities=34% Similarity=0.444 Sum_probs=110.2
Q ss_pred chhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhch--HHHHHHHHHHHhhhhhhccchhhhh
Q 010375 83 QGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAAN--LAMLLTGRILLGVGIGFGNQAVPLY 160 (512)
Q Consensus 83 ~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~--~~~l~~~r~l~G~~~~~~~~~~~~~ 160 (512)
.+.++..+.+.++..++.++.|.++||+|||+.+..+.....++.+++++..+ .+.+++.|+.+|++.+...+...++
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 118 (338)
T COG0477 39 LLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASAL 118 (338)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 47899999999999999999999999999998888888776666777777776 8999999999999999999999999
Q ss_pred hhhcCCC-CCchhHHHHHHH-HHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHH
Q 010375 161 LSEMAPT-HLRGGLNMMFQL-ATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMM 217 (512)
Q Consensus 161 i~~~~~~-~~r~~~~~~~~~-~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~ 217 (512)
+.|++|+ ++|+...+.... ...+|..+++.++.........+||+.|.+........
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (338)
T COG0477 119 LSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGLLL 177 (338)
T ss_pred HHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 9999987 678988888888 57788888886643222224468999766666555433
|
|
| >KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.83 E-value=6.8e-08 Score=85.87 Aligned_cols=342 Identities=11% Similarity=0.040 Sum_probs=205.3
Q ss_pred ccCcchhH-HHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchh
Q 010375 79 KYDNQGLA-AFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAV 157 (512)
Q Consensus 79 ~~s~~~~g-~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 157 (512)
|++..++. -+.-...-.+.+.-++.=.+.|-.--|++++.-.+.......+.-+.++.+.+=+.-++.|...+. ..+-
T Consensus 37 NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAa-EIAY 115 (433)
T KOG3810|consen 37 NLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAA-EIAY 115 (433)
T ss_pred CccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHHH-HHhh
Confidence 55555443 223334455566666777899999889999988888888888889999999999999999997764 5678
Q ss_pred hhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhccCCChhHHHHcCCH
Q 010375 158 PLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKK 237 (512)
Q Consensus 158 ~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~ 237 (512)
++++-+-.+++++.++.+...++.-.|...|..++......+..+++..-.+......+...+.+++|..+|.+.-+.+.
T Consensus 116 ysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~~~~ 195 (433)
T KOG3810|consen 116 YSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFHRLE 195 (433)
T ss_pred hheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCchhhhhhccc
Confidence 89999999999999999999999999988888886655656666777777776666666777778888777655433333
Q ss_pred HHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHhcCC
Q 010375 238 VEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGF 317 (512)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 317 (512)
++.. ..+..+.+. ..+..+..+ ..-......+.+..+++. +....+-.....++++-...|...+-++..-
T Consensus 196 ~~~~--v~~~e~~~~-~~~~~~~l~--~~~~~l~~~l~~~y~np~----ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~ 266 (433)
T KOG3810|consen 196 DKIS--VGDLEEMNP-QASYMSYLR--GAFVLLWRDLQECYSNPR----LLKWSLWWALASCGYYQVTNYTQILWKEVAP 266 (433)
T ss_pred ccce--eccchhcCc-cchhhHHHH--HHHHHHHHHHHHHhcCch----hhhhHHHHHHhhchhHHHHHHHHHHHHhhCC
Confidence 2110 000000000 000000000 000001112222333332 2222333333444666677777776666431
Q ss_pred C--CchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHH
Q 010375 318 K--GDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICL 395 (512)
Q Consensus 318 ~--~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (512)
. ..-.|..-++..+.+.++.+..|++.-.+.|+.-+.++..-..-+..++... .....|...+...+
T Consensus 267 ~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~-----------~t~~Iw~~Ya~yvl 335 (433)
T KOG3810|consen 267 NPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMA-----------QTQHIWVCYAGYVL 335 (433)
T ss_pred CchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhh-----------cccceehhhhhHHH
Confidence 1 1123556667777888888888988766666544433333222222222221 11335666666677
Q ss_pred HHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHH
Q 010375 396 FVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQI 442 (512)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~ 442 (512)
+...+..... +....+++....+.-|...|+..+..-+-..+-..+
T Consensus 336 fr~~y~l~it-iA~~~iA~nL~~e~~gLvFGiNTFvAl~lQsilT~i 381 (433)
T KOG3810|consen 336 FRVIYQLTIT-IATFQIARNLSSELFGLVFGINTFVALILQSILTLI 381 (433)
T ss_pred HHhhHhhhhh-HHHHHHHHhhhhhhheeeeehHHHHHHHHHHhheEE
Confidence 7666664433 223344556667777888888887776665554443
|
|
| >PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age | Back alignment and domain information |
|---|
Probab=98.82 E-value=5e-07 Score=84.50 Aligned_cols=136 Identities=14% Similarity=0.071 Sum_probs=97.6
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhhhhhc
Q 010375 85 LAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEM 164 (512)
Q Consensus 85 ~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 164 (512)
.+.+.-+-.+...+.-+.+.++.+|+.-+.=+....++..++.++.+++++.+.=+++-++.+++.|........+.. .
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~ 139 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-F 139 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-h
Confidence 444555566667777777888889887554456666788889999999999999999999999999999888887654 5
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhc-cCC
Q 010375 165 APTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGIL-LPE 226 (512)
Q Consensus 165 ~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~-~~e 226 (512)
+++ ..++-+..+.+.+.++|+..-.+... ...+-|..+.+..++.++..+..++ +|+
T Consensus 140 y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~ 197 (402)
T PF02487_consen 140 YGK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPS 197 (402)
T ss_pred cCc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 553 35788888888888888877322222 2344577777777666555555444 443
|
The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane |
| >PRK09848 glucuronide transporter; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.6e-07 Score=92.65 Aligned_cols=115 Identities=10% Similarity=0.087 Sum_probs=93.6
Q ss_pred cccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhc--hHHHHHHHHHHHhhhhhhccc
Q 010375 78 CKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAA--NLAMLLTGRILLGVGIGFGNQ 155 (512)
Q Consensus 78 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~ 155 (512)
+|.+....++......++..++.++++++.||+|+|+++.++.++.+++.++..+.+ +++.+++..++.|+|.+...+
T Consensus 259 ~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~ 338 (448)
T PRK09848 259 LNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMT 338 (448)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHH
Confidence 354555555555555677888999999999999999999999998888887777654 667777788899999999999
Q ss_pred hhhhhhhhcCCCC-------CchhHHHHHHHHHHHHHHHHHHHH
Q 010375 156 AVPLYLSEMAPTH-------LRGGLNMMFQLATTLGIFTANMIN 192 (512)
Q Consensus 156 ~~~~~i~~~~~~~-------~r~~~~~~~~~~~~lG~~~~~~~~ 192 (512)
...++.+|..+.+ ++|...++.+....+|..+++.+.
T Consensus 339 ~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~ 382 (448)
T PRK09848 339 VMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIP 382 (448)
T ss_pred HHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998888654 358889999999999999988874
|
|
| >PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=98.81 E-value=8.9e-08 Score=84.05 Aligned_cols=169 Identities=13% Similarity=0.162 Sum_probs=115.5
Q ss_pred hhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCC
Q 010375 298 LTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGP 377 (512)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (512)
....+.+..|.|.+.+++|++..+...+.....++..+| ++.|.+.|++|++.++.++.+...++...+.......
T Consensus 15 ~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~--- 90 (250)
T PF06813_consen 15 SGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGR--- 90 (250)
T ss_pred cCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCc---
Confidence 335677889999999899999999998888888888765 8899999999999999999999999998887664221
Q ss_pred CcccccchhhHHHHHHHHHHHHhhhcc-cceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHH
Q 010375 378 NQELSKSFSILVVVVICLFVLAFGWSW-GPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFL 456 (512)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ 456 (512)
.+....|......+ ..+.+.++ .........+.+| ++||++.|+.-....+++++-..+...+.+........
T Consensus 91 ---i~~~~~~~~~~~~~--l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll 164 (250)
T PF06813_consen 91 ---IPSLPVWLMCLFLF--LGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLL 164 (250)
T ss_pred ---cCccchHHHHHHHH--HHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHH
Confidence 01112222222222 22223222 2222233457888 57999999999999999999888887776664334444
Q ss_pred HHHHHHHHHHHHHhhccccC
Q 010375 457 FFAGWVTIMTIFVYFFLPET 476 (512)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~ 476 (512)
+.+....+++++...+++..
T Consensus 165 ~la~~~~~v~l~~~~~vr~~ 184 (250)
T PF06813_consen 165 FLAVLPAVVCLVAMFFVRPV 184 (250)
T ss_pred HHHHHHHHHHHHHhhheecc
Confidence 44444445555555555443
|
|
| >COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.80 E-value=4.1e-08 Score=92.50 Aligned_cols=177 Identities=14% Similarity=0.161 Sum_probs=134.0
Q ss_pred HHHHHHHHHHHhhchhHHHhhHHHHHHh-cC----CCCchhhHHHHHHHHHHHHHHHHHHHHHhhc-CChhHHHHhhHHH
Q 010375 287 VMAIFMPMFQILTGINSILFYAPVLFQS-MG----FKGDASLYSSAMTGAVLASSTLISIATVDKL-GRRALLISGGIQM 360 (512)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g----~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~r~~~~~~~~~~ 360 (512)
+..++..=+..-++|+++...+..|+.. .+ ++..++.-....++...-+..+++||++||+ |+|+.+..+.++.
T Consensus 23 l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~ 102 (498)
T COG3104 23 LYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILM 102 (498)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Confidence 4445555555556666666666666543 55 8988888888888888888889999999995 9999999999999
Q ss_pred HHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChh--hhhhHHHHHHHHHHHHHHH
Q 010375 361 ITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLE--TRSAGQSITVAVNLFFTFV 438 (512)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~g~~~~~~~~g~~~ 438 (512)
+++.+++.... ........+.+.+...+.+ .+-+....++.|++|++ +|-.+.++..+..++|+.+
T Consensus 103 ~iGh~~L~~~~-----------~~~~~gl~i~L~~I~iG~G-l~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~ 170 (498)
T COG3104 103 AIGHLVLAISS-----------VSGPGGLYIGLALIIVGTG-LFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLI 170 (498)
T ss_pred HHHHHHHhccc-----------cccccHHHHHHHHHHhccc-cccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHH
Confidence 99998887741 0113334444445555555 34455567888999764 4667888888889999999
Q ss_pred HHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhhcccc
Q 010375 439 IAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLPE 475 (512)
Q Consensus 439 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 475 (512)
+|.+.+++.+..++...+..+++....+++.+...++
T Consensus 171 ~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r 207 (498)
T COG3104 171 APIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRR 207 (498)
T ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccc
Confidence 9999999999999999999999998888888776653
|
|
| >KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.8e-07 Score=80.94 Aligned_cols=146 Identities=16% Similarity=0.080 Sum_probs=106.7
Q ss_pred CCccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHH-HHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhc
Q 010375 75 NNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICG-GISFLLGAALNAAAANLAMLLTGRILLGVGIGFG 153 (512)
Q Consensus 75 ~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~-~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 153 (512)
++.+|+|+...+.+.+..+.-.++.+++.|.++||+|++-..+.+ ++.+.++.....|+ ++.=.++..+.|+..+..
T Consensus 292 ~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft--~lsPy~~m~~lGLsysll 369 (459)
T KOG4686|consen 292 QKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFT--FLSPYTSMTFLGLSYSLL 369 (459)
T ss_pred HHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhh--hccHHHHHHHHhhhHHHH
Confidence 334599999999999999999999999999999999999766554 44445555554443 333356677888877766
Q ss_pred cchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCC---CchhHHHHh-hHHHHHHHHHHhhcc
Q 010375 154 NQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLET---WGWRLSLGL-AAAPALMMTVGGILL 224 (512)
Q Consensus 154 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~---~~Wr~~f~~-~~~~~~~~~~~~~~~ 224 (512)
-......++-..|+++.|++.+..+...++|..+.|+++ +.+.++ +.|--.|.+ .+.+++....+.+.+
T Consensus 370 AcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iia--g~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~ 442 (459)
T KOG4686|consen 370 ACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIA--GFIADGDGSYDNLEAFFLIIGLMALTSVGILFYL 442 (459)
T ss_pred HHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhh--heeecCCCchhhHHHHHHHHHHHHHHHHHHHhhe
Confidence 555667788888999999999999999999999999994 444443 446555554 444455544444444
|
|
| >KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.6e-07 Score=79.25 Aligned_cols=307 Identities=13% Similarity=0.154 Sum_probs=165.0
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhh
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVP 158 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 158 (512)
+....++|.+.-...-..++...+.|.++|+-|||+.-+.-++.++++++ .-.+++|-.++++|.+-|+..+..+.+..
T Consensus 68 gFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-TKhSpqYkVLmVGR~LGGiaTsLLFSaFE 146 (454)
T KOG4332|consen 68 GFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TKHSPQYKVLMVGRVLGGIATSLLFSAFE 146 (454)
T ss_pred CccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hhcCCceEEEeehhhhhhHHHHHHHHHHH
Confidence 66788889888888888888899999999999999987766666655543 34678999999999999999998888777
Q ss_pred hh-hhhcCCCCCchhHHHHHHH----HHHHH----HHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhccCCChh
Q 010375 159 LY-LSEMAPTHLRGGLNMMFQL----ATTLG----IFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPN 229 (512)
Q Consensus 159 ~~-i~~~~~~~~r~~~~~~~~~----~~~lG----~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~ 229 (512)
++ +.|.- ++|+.-.-+... +.-+| .+++.+.+......-..|--.+|-..+.+..+...+.+- .
T Consensus 147 sWliaEHn--ekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvil~-----~ 219 (454)
T KOG4332|consen 147 SWLIAEHN--EKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVILS-----S 219 (454)
T ss_pred HHHHHHhh--hccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHh-----h
Confidence 75 45654 233322222211 11122 222222211111111234444555444433333222211 1
Q ss_pred HHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHH
Q 010375 230 SLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAP 309 (512)
Q Consensus 230 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (512)
|-..-++..|.++...+. +...+.+..+ +++.++-.+........+.....|.|
T Consensus 220 W~ENygdps~~kdlltqf-----------------------~gaa~aiaSD---~ki~LLG~iqsLFE~smytFVFLWTP 273 (454)
T KOG4332|consen 220 WSENYGDPSENKDLLTQF-----------------------KGAARAIASD---EKIALLGAIQSLFEGSMYTFVFLWTP 273 (454)
T ss_pred hhhccCChhhhHHHHHHh-----------------------hHhHHHHhcc---hHHHHHHHHHHHHhhhhheeeeeecc
Confidence 111112222211111111 1111222222 22233334444444444445555666
Q ss_pred HHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCCh--hHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhh
Q 010375 310 VLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRR--ALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSI 387 (512)
Q Consensus 310 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (512)
.+--. -....-|.+++.+.+..++|+-+..++..|-..| ..+.+........+.+...... ..+. +....
T Consensus 274 aLspn--~e~iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~--vsP~----kes~~ 345 (454)
T KOG4332|consen 274 ALSPN--DEEIPHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSS--VSPS----KESPS 345 (454)
T ss_pred cCCCC--cccCCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhc--cCCC----cCCch
Confidence 54211 1122346778888888888888887776654433 3444444444443333333322 1111 22333
Q ss_pred HHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHH
Q 010375 388 LVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSIT 428 (512)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~ 428 (512)
..++..+++-.+.+..+.++ .-+-.+..|.+.|++.+-+.
T Consensus 346 ~s~i~F~~~E~cvGlfwPSi-mkmRsqyIPEearstimNfF 385 (454)
T KOG4332|consen 346 ESLIGFCLFEACVGLFWPSI-MKMRSQYIPEEARSTIMNFF 385 (454)
T ss_pred HHHHHHHHHHHHHhhcchHH-HHHHHhhCCHHHHhhhhhhe
Confidence 44667777778888776666 45556788999888665443
|
|
| >PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins | Back alignment and domain information |
|---|
Probab=98.75 E-value=7e-08 Score=95.13 Aligned_cols=138 Identities=17% Similarity=0.139 Sum_probs=95.6
Q ss_pred HhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccc
Q 010375 305 LFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKS 384 (512)
Q Consensus 305 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (512)
...++++.++.|-+ ....++.....+...+..++.|+++|.+|||+.++.+.++..++.++.... +
T Consensus 64 a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA-------------~ 129 (599)
T PF06609_consen 64 ASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATA-------------Q 129 (599)
T ss_pred HHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcC-------------C
Confidence 34456666777765 555677778888999999999999999999999999999888888777653 2
Q ss_pred hhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHH
Q 010375 385 FSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFF 458 (512)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~ 458 (512)
+....+....+.+.+.+... +....++|..|.+.|..+.++.....-....+++.+...+..+.+|...+.+
T Consensus 130 ~~~~~iag~~l~GvgaG~~~--~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~ 201 (599)
T PF06609_consen 130 NMNTFIAGMVLYGVGAGVQE--LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYI 201 (599)
T ss_pred cHHHHHHHHHHHHHhhHHHH--HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHH
Confidence 23445556666665544332 3345578999999998887766655545455666666655545555443333
|
Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes []. |
| >PF13347 MFS_2: MFS/sugar transport protein | Back alignment and domain information |
|---|
Probab=98.70 E-value=2.6e-07 Score=90.53 Aligned_cols=110 Identities=19% Similarity=0.153 Sum_probs=99.2
Q ss_pred chhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhc--hHHHHHHHHHHHhhhhhhccchhhhh
Q 010375 83 QGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAA--NLAMLLTGRILLGVGIGFGNQAVPLY 160 (512)
Q Consensus 83 ~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~ 160 (512)
...+.+.....++..++.+++++++||+|+|+++..+.++.+++.++..+.+ |.+.+++.-++.|++.+...+...++
T Consensus 260 ~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~ 339 (428)
T PF13347_consen 260 GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAM 339 (428)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccc
Confidence 5778888899999999999999999999999999999999999999988886 99999999999999999999999999
Q ss_pred hhhcCCC-------CCchhHHHHHHHHHHHHHHHHHHHH
Q 010375 161 LSEMAPT-------HLRGGLNMMFQLATTLGIFTANMIN 192 (512)
Q Consensus 161 i~~~~~~-------~~r~~~~~~~~~~~~lG~~~~~~~~ 192 (512)
++|..+. ++.|...+......-+|..+++.+.
T Consensus 340 ~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~ 378 (428)
T PF13347_consen 340 LADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIV 378 (428)
T ss_pred cccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHH
Confidence 9998863 3347888999888888888888874
|
|
| >TIGR00788 fbt folate/biopterin transporter | Back alignment and domain information |
|---|
Probab=98.68 E-value=3.2e-07 Score=90.42 Aligned_cols=151 Identities=11% Similarity=0.017 Sum_probs=116.3
Q ss_pred CccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhh----------chHHHHHHHHHH
Q 010375 76 NYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAA----------ANLAMLLTGRIL 145 (512)
Q Consensus 76 ~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~----------~~~~~l~~~r~l 145 (512)
+++|.++.+.|.+.....++..++....+++.+|++.|+++.++.++.+++.+..... ++.+..+..-++
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l 360 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII 360 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence 3468999999999999999999999999999999999999999999999887654311 344455666789
Q ss_pred HhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcc-----cCCCchhHHHHh-hHHHHHHHHH
Q 010375 146 LGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQK-----LETWGWRLSLGL-AAAPALMMTV 219 (512)
Q Consensus 146 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~-----~~~~~Wr~~f~~-~~~~~~~~~~ 219 (512)
.+++.+........++.+..|+++++...++.....++|..+++.++..... .++++.++...+ ..+..++.+.
T Consensus 361 ~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~~l~ 440 (468)
T TIGR00788 361 AEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLLPLP 440 (468)
T ss_pred HHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999987432221 112333444333 3333344444
Q ss_pred HhhccCC
Q 010375 220 GGILLPE 226 (512)
Q Consensus 220 ~~~~~~e 226 (512)
..+++|+
T Consensus 441 ~~~llP~ 447 (468)
T TIGR00788 441 LLHLLPR 447 (468)
T ss_pred HHHhCCC
Confidence 4456785
|
The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity. |
| >COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.2e-06 Score=80.47 Aligned_cols=146 Identities=11% Similarity=-0.064 Sum_probs=111.4
Q ss_pred HHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHh
Q 010375 293 PMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILG 372 (512)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~ 372 (512)
.++.............|.+.+.++.+..++++.......+..++++..+++.+|+|+|+-++.+..+.++++.++.-...
T Consensus 21 lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~ 100 (422)
T COG0738 21 LFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAAS 100 (422)
T ss_pred HHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhh
Confidence 33333334455566788888889999999999999999999999999999999999999999999999999888864431
Q ss_pred hccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 010375 373 LKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCS 449 (512)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~ 449 (512)
. ......+..+++.+.+.+.- ......++..+.|++....-+.+.+.++.+|++++|.+.+.+..+
T Consensus 101 ~----------~~y~~FL~~lFila~Gi~~L-etaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils 166 (422)
T COG0738 101 S----------KSYGFFLVALFILASGIGLL-ETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILS 166 (422)
T ss_pred h----------hhHHHHHHHHHHHHhhhHHH-HhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHh
Confidence 1 11223333344444444422 233357778888888888889999999999999999999998873
|
|
| >KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.66 E-value=3.7e-07 Score=91.91 Aligned_cols=148 Identities=10% Similarity=0.104 Sum_probs=108.2
Q ss_pred HhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHH
Q 010375 313 QSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVV 392 (512)
Q Consensus 313 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (512)
+..+.+.....+..++..++.++|.++.|.++||+|||+++.++.++..++.+...+. ++.+...+.
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a-------------~~~~~~~~~ 177 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFA-------------PNYWMFLIF 177 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHh-------------CcHHHHHHH
Confidence 3355666777888999999999999999999999999999999999888887666554 224445555
Q ss_pred HHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhhc
Q 010375 393 ICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFF 472 (512)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 472 (512)
-++.+++.+. ...+.+.+..|..++++|+.+..+ ......++.+++...+++.. +|........+..+..++..++
T Consensus 178 Rfl~G~~~~~-~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~~~l 253 (521)
T KOG0255|consen 178 RFLSGFFGSG-PLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLLWFL 253 (521)
T ss_pred HHHHHhhccc-hhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHc
Confidence 5555555553 344556788999999999999999 88888888899999888877 4444444444444433344455
Q ss_pred cccCC
Q 010375 473 LPETK 477 (512)
Q Consensus 473 ~~~~~ 477 (512)
.+|.+
T Consensus 254 ~~Es~ 258 (521)
T KOG0255|consen 254 PPESP 258 (521)
T ss_pred cCcCh
Confidence 54653
|
|
| >KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.65 E-value=3.6e-06 Score=76.12 Aligned_cols=353 Identities=13% Similarity=0.025 Sum_probs=174.7
Q ss_pred HHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHHhhhhhhh-----h
Q 010375 35 AIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTR-----D 109 (512)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~d-----r 109 (512)
.+.+..+|...+..+ . +|-+.+.= |.|.++.+...-++. - .---++|.++.| |
T Consensus 37 l~LYllQGiP~GL~~-~--iP~lL~ak-----------------~vSyt~~a~fS~ay~-P-~sLKllWaPiVDs~y~k~ 94 (510)
T KOG3574|consen 37 LFLYLLQGIPLGLIG-A--IPLLLQAK-----------------GVSYTSQAIFSFAYW-P-FSLKLLWAPIVDSVYSKR 94 (510)
T ss_pred HHHHHHcCCchhHhh-h--hHHHhcCC-----------------Ccchhhhhhhhhhhh-H-HHHHHHHHhhhHHHHHHh
Confidence 445667788888776 3 45444421 557776665432221 1 233478999999 9
Q ss_pred hchhHHHHH-HHHHHHHHHHHHHhh-----------chHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHH
Q 010375 110 YGRRASIIC-GGISFLLGAALNAAA-----------ANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMF 177 (512)
Q Consensus 110 ~Grr~~l~~-~~~~~~~~~~~~~~~-----------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~ 177 (512)
+||||.-++ +..+.+..+.+.+.- ++...+...-++.-+.++.--.+.-.+.-....+++.|.+....
T Consensus 95 ~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q 174 (510)
T KOG3574|consen 95 FGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQ 174 (510)
T ss_pred hccccceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHH
Confidence 999986443 444444444443332 23333434445566666667777777777788888988888888
Q ss_pred HHHHHHHHHHHHHHHHhhcccC-------CCchh---------HHHHhhHHHHHHHHHHhhccCCChhHHHHcCCHHHHH
Q 010375 178 QLATTLGIFTANMINYGTQKLE-------TWGWR---------LSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGR 241 (512)
Q Consensus 178 ~~~~~lG~~~~~~~~~~~~~~~-------~~~Wr---------~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~ 241 (512)
..+...|.+++..+ ...+.. ..+|. .-.++.+.+.++.-.+..+..+++...
T Consensus 175 ~Vg~~~GyfL~~~i--fLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~---------- 242 (510)
T KOG3574|consen 175 SVGQTAGYFLGNVV--FLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDES---------- 242 (510)
T ss_pred HHHHhhhHHhhcce--eeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchh----------
Confidence 88888888877665 333221 01221 123344444444444444443333100
Q ss_pred HHHHHHcCCchhhHHHHHHHHHHHhhcccCc---ccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHhcCCC
Q 010375 242 RVLEKIRGTKEVNAEYQDMVDASELANSIKH---PFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFK 318 (512)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 318 (512)
..++.+...+. -++++++.+..+.+...... .=.++..-....+.-+-+.|++
T Consensus 243 --------------------~~~e~~~~i~~~yk~l~~vLklk~v~~la~i~lt----~K~gf~a~da~t~LkLle~Gv~ 298 (510)
T KOG3574|consen 243 --------------------VDEELELGIHESYKLLRDVLKLKSVRWLAGILLT----GKLGFQAADALTSLKLLEHGVP 298 (510)
T ss_pred --------------------hhhhhhcCHHHHHHHHHHHHcCccHHHHHHHHHH----HHHHhhhhhhccchHHHHcCCC
Confidence 00000111111 23444444443322221111 1112333344445556678988
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHhhcC------ChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHH
Q 010375 319 GDASLYSSAMTGAVLASSTLISIATVDKLG------RRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVV 392 (512)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~------~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (512)
....++...+..-.+++.....|++..... |+-...+.. ......+..........+...+ .......+.
T Consensus 299 ke~Lal~~v~~~plqI~l~~~~gk~ta~~~pl~~~lka~~~R~~~---~~~~t~Lv~~~~~~~~~~G~~~-~~~~il~i~ 374 (510)
T KOG3574|consen 299 KEELALIAVPLVPLQIALPLYIGKWTAGPRPLNVFLKAVPYRLGG---GLVQTALVWWTPTLGHSDGTFP-RGYYILLIT 374 (510)
T ss_pred hhHheeeeeehhhHHHhhhhhheeecCCCCcchHHHHhhhHHHHH---HHHHHHHHhhhcccccCCCcee-echHHHHHH
Confidence 777665554433344444444443332111 111111111 1111112221111000000001 111111111
Q ss_pred -HHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 010375 393 -ICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSF 450 (512)
Q Consensus 393 -~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~ 450 (512)
-.+........+... ++..+++.+|...|+.+.+.++..++|+---..+..++.|..
T Consensus 375 ~y~~~~~~~ts~fv~~-maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~l 432 (510)
T KOG3574|consen 375 SYAFHQVFVTSMFVSG-MAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGL 432 (510)
T ss_pred HHHHhhhHHHHHHHHH-HHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccC
Confidence 111222222122222 466788899999999999999999999887777887777744
|
|
| >COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.4e-06 Score=78.69 Aligned_cols=176 Identities=18% Similarity=0.135 Sum_probs=131.2
Q ss_pred CCchHHHHHHHHHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHH
Q 010375 22 KVTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASF 101 (512)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~ 101 (512)
+.++..|.+.+...+-++..+...++ +|.+..|. |+|..+.|++.+...+.....++
T Consensus 205 w~~~~aW~vtLfmGlqS~~~Y~~~~W------LP~ili~~-----------------G~sa~~aG~llsl~~l~~~~~~l 261 (395)
T COG2807 205 WRSPLAWQVTLFMGLQSLLYYIVIGW------LPAILIDR-----------------GLSAAEAGSLLSLMQLAQLPTAL 261 (395)
T ss_pred ccCchhHHHHHHHHhhHHHHHHHHHH------HHHHHHHc-----------------CCCHHHhhhHHHHHHHHHHHHHH
Confidence 34556788887777777776666666 56666655 89999999999999999999999
Q ss_pred hhhhhhhhh-chhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCC-chhHHHHHHH
Q 010375 102 VASPVTRDY-GRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHL-RGGLNMMFQL 179 (512)
Q Consensus 102 ~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~-r~~~~~~~~~ 179 (512)
....+++|. ++|+..+...+++.++.+.+.+.+.-..++- -++.|+|.|..++.+..++.+..++.+ -++..++.+.
T Consensus 262 l~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg 340 (395)
T COG2807 262 LIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQG 340 (395)
T ss_pred HHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhh
Confidence 999999965 6778888888888888888888775544333 499999999999999999998886543 3455555555
Q ss_pred HHHHHHHHHHHHHHhhcccC-CCchhHHHHhhHHHHHHHHHHhhc
Q 010375 180 ATTLGIFTANMINYGTQKLE-TWGWRLSLGLAAAPALMMTVGGIL 223 (512)
Q Consensus 180 ~~~lG~~~~~~~~~~~~~~~-~~~Wr~~f~~~~~~~~~~~~~~~~ 223 (512)
...+=...||.+ .+...+ ..+|+...+..+...++..+.-+.
T Consensus 341 ~GYllAa~GP~l--~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~ 383 (395)
T COG2807 341 VGYLLAAFGPWL--FGFLHDATGSWSAPLVLLALATLLMLIFGLR 383 (395)
T ss_pred hhHHHHhhhhhh--HhHHHHhcCChHHHHHHHHHHHHHHHHHHhh
Confidence 555555667777 344333 357999888877776665554443
|
|
| >KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.6e-06 Score=86.98 Aligned_cols=141 Identities=16% Similarity=0.065 Sum_probs=108.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhh
Q 010375 322 SLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFG 401 (512)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (512)
.+++.+...++..++.++.|+++|++|||+.+..+.+...++.++..... +.....+.-++.+.+.+
T Consensus 91 ~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~-------------~~~~l~~GR~l~G~g~G 157 (513)
T KOG0254|consen 91 QGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAP-------------SWYQLIVGRILTGLGVG 157 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhh-------------hHHHHHHHHHHhccchh
Confidence 37899999999999999999999999999999999999888888887752 34556666666776666
Q ss_pred hcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc--chhhHHHHHHHHHHHHHHHhhccccCC
Q 010375 402 WSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSF--KFGIFLFFAGWVTIMTIFVYFFLPETK 477 (512)
Q Consensus 402 ~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (512)
...... ..+.+|..|++.||...+..+....+|..++ .+.+....+. +|...+....+..+...+..++.||+.
T Consensus 158 ~~~~~~-piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp 233 (513)
T KOG0254|consen 158 GASVLA-PVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESP 233 (513)
T ss_pred hhhhcc-hhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 554444 5888999999999999999999888777776 5666655543 666666665555555555567777653
|
|
| >PRK10429 melibiose:sodium symporter; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.5e-06 Score=86.30 Aligned_cols=112 Identities=14% Similarity=0.093 Sum_probs=88.3
Q ss_pred CcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHh-----hchHHHHHHHHHHHhhhhhhccc
Q 010375 81 DNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAA-----AANLAMLLTGRILLGVGIGFGNQ 155 (512)
Q Consensus 81 s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~r~l~G~~~~~~~~ 155 (512)
+....+++.+...++..++.+++++++||+|+|+.+..+..+.+++.+...+ .++.+.+++.-++.|++.+...+
T Consensus 264 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~ 343 (473)
T PRK10429 264 DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWV 343 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHH
Confidence 3455677777777889999999999999999999999888877766655432 34567777778889999999999
Q ss_pred hhhhhhhhcCC-------CCCchhHHHHHHHHHHHHHHHHHHHH
Q 010375 156 AVPLYLSEMAP-------THLRGGLNMMFQLATTLGIFTANMIN 192 (512)
Q Consensus 156 ~~~~~i~~~~~-------~~~r~~~~~~~~~~~~lG~~~~~~~~ 192 (512)
...++++|..+ +++.|..++......-+|..+++.+.
T Consensus 344 ~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~ 387 (473)
T PRK10429 344 LQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFI 387 (473)
T ss_pred HHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999865 23345688888888888888887774
|
|
| >PRK09669 putative symporter YagG; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=4.3e-06 Score=82.40 Aligned_cols=109 Identities=16% Similarity=0.162 Sum_probs=84.6
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHh--hchHHHHHHHHHHHhhhhhhccchhhhhh
Q 010375 84 GLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAA--AANLAMLLTGRILLGVGIGFGNQAVPLYL 161 (512)
Q Consensus 84 ~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~--~~~~~~l~~~r~l~G~~~~~~~~~~~~~i 161 (512)
..+.+.....+...++.+++++++||+|+|+.+..+.++.++......+ .++.+.+++..++.|++.+...+...+++
T Consensus 265 ~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ 344 (444)
T PRK09669 265 LATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMF 344 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445666677888899999999999999999998887766654443322 35777788888999999999999999999
Q ss_pred hhcCCC-------CCchhHHHHHHHHHHHHHHHHHHHH
Q 010375 162 SEMAPT-------HLRGGLNMMFQLATTLGIFTANMIN 192 (512)
Q Consensus 162 ~~~~~~-------~~r~~~~~~~~~~~~lG~~~~~~~~ 192 (512)
+|..+. ++.|...+.......+|..+|+.++
T Consensus 345 ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~ 382 (444)
T PRK09669 345 SDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVV 382 (444)
T ss_pred HhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 988752 2335677888888888888888774
|
|
| >KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.44 E-value=9.8e-07 Score=84.25 Aligned_cols=159 Identities=14% Similarity=0.029 Sum_probs=106.1
Q ss_pred HHHh--cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCC-hhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhh
Q 010375 311 LFQS--MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGR-RALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSI 387 (512)
Q Consensus 311 ~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (512)
|+++ .+-+.+..|+..+...++..++++..++...|.++ |+.++.+.+++.++.++.....+. ++...+
T Consensus 60 Yl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~--------~~~~~y 131 (488)
T KOG2325|consen 60 YLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYV--------PNGVKY 131 (488)
T ss_pred hhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhc--------ccchHH
Confidence 4455 66677788999999999999999999999999886 788888988888888877544321 111233
Q ss_pred HHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc------------c-h-h
Q 010375 388 LVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSF------------K-F-G 453 (512)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~------------g-~-~ 453 (512)
.++..- ...+.+.+.......|+++..-.++|.++++..+....+|.++||.+...+.... + | .
T Consensus 132 ~mL~~R--~l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTa 209 (488)
T KOG2325|consen 132 LMLVAR--ILTGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTA 209 (488)
T ss_pred HHHHHH--HHcCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecch
Confidence 333333 3334443444455778888777788888888888877777777776654433211 0 2 2
Q ss_pred hHHHHHHHHHHHHHHHhhccccCCCC
Q 010375 454 IFLFFAGWVTIMTIFVYFFLPETKGV 479 (512)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (512)
..|+.+.+.++..++..++++|..+.
T Consensus 210 p~w~m~i~~i~~~v~i~~~f~E~~~~ 235 (488)
T KOG2325|consen 210 PAWLMAILWIIYIVIILFFFKEVYRG 235 (488)
T ss_pred HHHHHHHHHHHHHHHHHhheeecccC
Confidence 34555555566666666677765443
|
|
| >PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters | Back alignment and domain information |
|---|
Probab=98.40 E-value=9e-09 Score=101.75 Aligned_cols=145 Identities=19% Similarity=0.204 Sum_probs=102.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHh
Q 010375 321 ASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAF 400 (512)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (512)
..+...+...++.++|+++.|+++||+|||+.+..+..+..++.++..+... ..+.+...+.-++.+++.
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~----------~~~~~~~~~~R~~~G~~~ 116 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPS----------YNNFWMLLIGRFLIGFGI 116 (451)
T ss_pred HHHHHHHHHHhhhccccccccccccccccccccccccccccccccccccccc----------cccccccccccccccccc
Confidence 3567888899999999999999999999999999998888887776666420 012444555556666666
Q ss_pred hhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh---cchhhHHHHHHHHHHHHHHHhhccccC
Q 010375 401 GWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCS---FKFGIFLFFAGWVTIMTIFVYFFLPET 476 (512)
Q Consensus 401 ~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (512)
+... +....++.|..|++.|+...++.+....+|..++..+...+.+. ..|.....+..+..+..++...++||+
T Consensus 117 g~~~-~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pES 194 (451)
T PF00083_consen 117 GGAY-VVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPES 194 (451)
T ss_pred cccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 6444 34468889999999999999999888888877766655433222 235555555555555555556677775
|
Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane |
| >KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.39 E-value=3.9e-06 Score=81.86 Aligned_cols=151 Identities=13% Similarity=0.058 Sum_probs=107.0
Q ss_pred hcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHH
Q 010375 314 SMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVI 393 (512)
Q Consensus 314 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (512)
+.++...+.+...+.+.++.+++.+.++.+.||++..+.+....++..+..++-... ++.+..++.-
T Consensus 75 dl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~-------------~s~~~~ialr 141 (495)
T KOG2533|consen 75 DLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAV-------------HSFPGLIALR 141 (495)
T ss_pred ccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHH-------------hhhHHHHHHH
Confidence 356667788999999999999999999999999995555444333322222111111 2244555666
Q ss_pred HHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHh------hcchhhHH-HHHHHHHHHH
Q 010375 394 CLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLC------SFKFGIFL-FFAGWVTIMT 466 (512)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~------~~g~~~~~-~~~~~~~~~~ 466 (512)
++.+..-+.++.+. ..++...+.+++|+..+|+.+....+|+++++.+...+.. ..||...+ +-+++.+..+
T Consensus 142 ~llGl~es~~wP~~-~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~g 220 (495)
T KOG2533|consen 142 FLLGLFESGGWPGV-VAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLG 220 (495)
T ss_pred HHHHHHhcccchHH-HHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHH
Confidence 66776766665555 5777899999999999999999999999999999887643 23455444 4455566667
Q ss_pred HHHhhccccCCC
Q 010375 467 IFVYFFLPETKG 478 (512)
Q Consensus 467 ~~~~~~~~~~~~ 478 (512)
+++++++|+...
T Consensus 221 i~~f~~lp~~P~ 232 (495)
T KOG2533|consen 221 IVVFFFLPDNPS 232 (495)
T ss_pred heEEEEecCChh
Confidence 777788886554
|
|
| >PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans | Back alignment and domain information |
|---|
Probab=98.39 E-value=8.9e-06 Score=65.85 Aligned_cols=115 Identities=17% Similarity=0.136 Sum_probs=95.9
Q ss_pred cCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhh
Q 010375 80 YDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPL 159 (512)
Q Consensus 80 ~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 159 (512)
+++..--.-.++.+....+++++.+.+.+++|.|+.+++|.+.+.+-.... +-++.+.++.+-++.|++.+..+..-..
T Consensus 34 i~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ 112 (156)
T PF05978_consen 34 ISAGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGT 112 (156)
T ss_pred ccccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhH
Confidence 344433444566667778888999999999999999999999988655544 5677889999999999999999999999
Q ss_pred hhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhh
Q 010375 160 YLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGT 195 (512)
Q Consensus 160 ~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~ 195 (512)
++.+..++++|++-.+++......+.++|.++.+..
T Consensus 113 ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 113 YLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998875443
|
UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein []. |
| >PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters | Back alignment and domain information |
|---|
Probab=98.35 E-value=2.1e-06 Score=60.60 Aligned_cols=62 Identities=21% Similarity=0.173 Sum_probs=58.3
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHH
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLL 140 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~ 140 (512)
++|.++.|++.+.+++||.+|.+...++.++..+++.+..+++...+..+.+++.++++...
T Consensus 23 ~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w~ 84 (85)
T PF06779_consen 23 GLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLWS 84 (85)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHHh
Confidence 89999999999999999999999999999998889999999999999999999998887543
|
Note that many members are hypothetical proteins. |
| >PRK11462 putative transporter; Provisional | Back alignment and domain information |
|---|
Probab=98.34 E-value=2e-05 Score=77.68 Aligned_cols=142 Identities=15% Similarity=0.114 Sum_probs=93.5
Q ss_pred chhHHHhhHHHHHHh-cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhh----cCChhHHH-HhhHHHHHHHHHHHHHHhh
Q 010375 300 GINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDK----LGRRALLI-SGGIQMITCQVIVSIILGL 373 (512)
Q Consensus 300 ~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~~~r~~~~-~~~~~~~~~~~~~~~~~~~ 373 (512)
.+.....|+.++..+ .|+++..++.+..+.-+...+.-++.|+++|| +||||..+ ++.+..+++..++...
T Consensus 24 ~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~--- 100 (460)
T PRK11462 24 IFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYST--- 100 (460)
T ss_pred HHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhC---
Confidence 344555566666555 89999999999999999999999999999997 47765544 4555555554433321
Q ss_pred ccCCCcccccch-hhHHHHHHHHHHHHhhhcccceeeeeecccCC-hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 010375 374 KFGPNQELSKSF-SILVVVVICLFVLAFGWSWGPLGWTVPSEIFP-LETRSAGQSITVAVNLFFTFVIAQIFLTLLCSF 450 (512)
Q Consensus 374 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~ 450 (512)
++ .+... .....+..+++..++.....|. .++.+|+.+ +++|.+..+.....+.+|..+++.+...+....
T Consensus 101 ---p~--~s~~~~~~y~~~~~~~~~~~~t~~~ipy-~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~ 173 (460)
T PRK11462 101 ---PD--LSMNGKMIYAAITYTLLTLLYTVVNIPY-CALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLI 173 (460)
T ss_pred ---CC--CCcchHHHHHHHHHHHHHHHHHHHhccH-HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 10 01111 1223333344455555444444 466677775 689999999999999998888877766655543
|
|
| >COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.33 E-value=4e-05 Score=73.26 Aligned_cols=113 Identities=14% Similarity=0.169 Sum_probs=92.6
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhc--hHHHHHHHHHHHhhhhhhccch
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAA--NLAMLLTGRILLGVGIGFGNQA 156 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~ 156 (512)
|.++....+.......+..++.+++.++++|+|+|+++.++.++.+++.++.-+.+ +.+..++..++.+++.+...+.
T Consensus 268 g~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l 347 (467)
T COG2211 268 GDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPL 347 (467)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccc
Confidence 44666677778888888888899999999999999999999999999999988876 7888899999999999999999
Q ss_pred hhhhhhhcCCC-------CCchhHHHHHHHHHHHHHHHHHHH
Q 010375 157 VPLYLSEMAPT-------HLRGGLNMMFQLATTLGIFTANMI 191 (512)
Q Consensus 157 ~~~~i~~~~~~-------~~r~~~~~~~~~~~~lG~~~~~~~ 191 (512)
..++++|..+- +.-|...+......=+|.+++..+
T Consensus 348 ~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~ 389 (467)
T COG2211 348 PWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFI 389 (467)
T ss_pred cHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHH
Confidence 99999877642 223566677666666777766654
|
|
| >KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.32 E-value=3.5e-06 Score=78.42 Aligned_cols=117 Identities=21% Similarity=0.132 Sum_probs=78.2
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCccccc-chhhHHHHHHHH
Q 010375 317 FKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSK-SFSILVVVVICL 395 (512)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 395 (512)
+++...+.+.....++.++|+++.|++.||+|||+++...++++.++.++..+.... .++ .-.+++...=.+
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~-------~~~~~~m~~L~~~R~~ 153 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGT-------TSPLGVMMTLCFFRFL 153 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCC-------CCCcchhhHHHHHHHH
Confidence 455667888889999999999999999999999999988888887777644443211 011 111222222233
Q ss_pred HHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHH
Q 010375 396 FVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQ 441 (512)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~ 441 (512)
.+++.+ +=.|+..+.++|....+.||.-.+........|...+..
T Consensus 154 LGiGIG-GDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~i 198 (538)
T KOG0252|consen 154 LGIGIG-GDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGI 198 (538)
T ss_pred hhcccc-CCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccH
Confidence 333333 224677788899999999998777766665555444433
|
|
| >KOG3762 consensus Predicted transporter [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.1e-06 Score=83.32 Aligned_cols=144 Identities=18% Similarity=0.101 Sum_probs=127.0
Q ss_pred ccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccch
Q 010375 77 YCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQA 156 (512)
Q Consensus 77 ~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 156 (512)
|.+-.+...|........|-++.-++.+++..|+|+-+++.+++.+..+=.+..++.+|.|+.+...+++|+..+..+..
T Consensus 400 d~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa 479 (618)
T KOG3762|consen 400 DLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAA 479 (618)
T ss_pred hcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHH
Confidence 33557777888888888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhcCCCCCchhHHHHHHH-HHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhh
Q 010375 157 VPLYLSEMAPTHLRGGLNMMFQL-ATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGI 222 (512)
Q Consensus 157 ~~~~i~~~~~~~~r~~~~~~~~~-~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~ 222 (512)
..+|++...||+-|..+.++.+. ..++|-.+|.++ ++...+.++=|..|.+.++.+++.+++..
T Consensus 480 ~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslI--GG~~v~~fg~~ttf~~~giAcl~~l~~~~ 544 (618)
T KOG3762|consen 480 IISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLI--GGFVVERFGARTTFRIFGIACLVTLALFI 544 (618)
T ss_pred HHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhh--hhhhheeehhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998765 567888888888 67777778889999998888877665553
|
|
| >PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon | Back alignment and domain information |
|---|
Probab=98.17 E-value=5.3e-05 Score=70.43 Aligned_cols=152 Identities=13% Similarity=0.058 Sum_probs=122.5
Q ss_pred cccCCccccCcchhHHHHHHHHHHHHHHHHhhhhhhh-hhchhHHHHHHHHHHHHHHHHHHh---hchHHHHHHHHHHHh
Q 010375 72 AHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTR-DYGRRASIICGGISFLLGAALNAA---AANLAMLLTGRILLG 147 (512)
Q Consensus 72 ~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~d-r~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~l~~~r~l~G 147 (512)
|...+.||++..+...+......|..++....|++.. |.++|+...+++...+++..+..+ ..+.+.+...-++.|
T Consensus 233 Pygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G 312 (403)
T PF03209_consen 233 PYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLG 312 (403)
T ss_pred CchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHH
Confidence 3346668999999999999999999999999999888 678888888888888777766444 467889999999999
Q ss_pred hhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcc--------cCCCchhHHHHhhHHHHHHHHH
Q 010375 148 VGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQK--------LETWGWRLSLGLAAAPALMMTV 219 (512)
Q Consensus 148 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~--------~~~~~Wr~~f~~~~~~~~~~~~ 219 (512)
++.|.......+.+.+...+++.|..+|.+.....++..++..++..... ....+|-.+|.+-++..++++.
T Consensus 313 ~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ 392 (403)
T PF03209_consen 313 LGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALV 392 (403)
T ss_pred HhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999988888888777533321 1234677778877777666655
Q ss_pred Hhhc
Q 010375 220 GGIL 223 (512)
Q Consensus 220 ~~~~ 223 (512)
+...
T Consensus 393 ll~~ 396 (403)
T PF03209_consen 393 LLGR 396 (403)
T ss_pred HHHH
Confidence 5443
|
It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase. |
| >PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
Probab=98.13 E-value=0.0001 Score=67.45 Aligned_cols=154 Identities=18% Similarity=0.016 Sum_probs=91.5
Q ss_pred HHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHH
Q 010375 311 LFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVV 390 (512)
Q Consensus 311 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (512)
+.+++|++..+.+.++....+...+...+.|.++||+|||+.-+..+++..++++.-.. +..+..+
T Consensus 60 LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~--------------~~~~~L~ 125 (354)
T PF05631_consen 60 LYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHS--------------SNYPVLL 125 (354)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhc--------------cccHHHH
Confidence 44679999999999999999999999999999999999999887777766666543211 2233333
Q ss_pred HHHHHHHHHhhhcccceeeeeeccc----CChhhhhhHHHHHHH-HHHHHHHHHHHHHHHHHhhcch--hhHHHHHHHHH
Q 010375 391 VVICLFVLAFGWSWGPLGWTVPSEI----FPLETRSAGQSITVA-VNLFFTFVIAQIFLTLLCSFKF--GIFLFFAGWVT 463 (512)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~----~p~~~~~~~~g~~~~-~~~~g~~~~~~~~~~~~~~~g~--~~~~~~~~~~~ 463 (512)
+.=++.+......+...-.-++.|. +|++..+...+.... .+.+.++++..+...+.+..+. ...+..+..++
T Consensus 126 ~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l 205 (354)
T PF05631_consen 126 LGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLL 205 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHH
Confidence 3334444443333322111122333 465655666665553 3445555666666666666543 44445554444
Q ss_pred HHHHHH-hhccccCCC
Q 010375 464 IMTIFV-YFFLPETKG 478 (512)
Q Consensus 464 ~~~~~~-~~~~~~~~~ 478 (512)
+++.++ ....+|..+
T Consensus 206 ~~~~~~I~~~W~ENyg 221 (354)
T PF05631_consen 206 AVAAVLILKTWPENYG 221 (354)
T ss_pred HHHHHHHHhcccccCC
Confidence 444433 334455443
|
|
| >TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT) | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.00057 Score=66.26 Aligned_cols=116 Identities=9% Similarity=0.029 Sum_probs=62.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcCCh-hHHHHhhHHHHHHHHHHHHHHhhccCCCccc--ccchhhHHHHHHHHHHH
Q 010375 322 SLYSSAMTGAVLASSTLISIATVDKLGRR-ALLISGGIQMITCQVIVSIILGLKFGPNQEL--SKSFSILVVVVICLFVL 398 (512)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~g~l~d~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 398 (512)
.-.....+.++..+|+.+..+.. .-++| +.+.+..+.=.+. +.+.+.+.. .+..+. .-++.+..++.+.+++.
T Consensus 309 ~~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iF-IPlf~lcn~--~~~~~~p~~~~~d~~~~~~~~l~gl 384 (437)
T TIGR00939 309 PIICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLF-IPLFLLCNY--PQRSRLPVFFPGDAYFIILMLLFGF 384 (437)
T ss_pred HHHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHH-HHHHHHhcC--CccccCCeeecccHHHHHHHHHHHH
Confidence 34567777888899988665431 11222 1222222222222 222222211 111110 11344555666666666
Q ss_pred HhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHH
Q 010375 399 AFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQI 442 (512)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~ 442 (512)
..|.. ....+.+..+..++++|..+..+...+-.+|-.+|..+
T Consensus 385 tnGy~-~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 385 SNGYL-GSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred hhhHH-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66643 34445677788888888888777777777777666654
|
|
| >KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.00012 Score=71.13 Aligned_cols=137 Identities=16% Similarity=0.145 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhccccee
Q 010375 329 TGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLG 408 (512)
Q Consensus 329 ~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (512)
.++..++.++..|.++||+|||..+........+....+.+.. ++..+...+.+ +++ ......
T Consensus 71 ~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~---------------~~~~~~~~l~g-~~~-~~~s~~ 133 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG---------------YWFFLLLGLSG-GFS-AIFSVG 133 (463)
T ss_pred hHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH---------------HHHhhhccccc-chh-hhhhhh
Confidence 4678888999999999999999998888777666665555431 22222222222 222 223344
Q ss_pred eeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHH-HHHHhhccccCCCCCHH
Q 010375 409 WTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIM-TIFVYFFLPETKGVPIE 482 (512)
Q Consensus 409 ~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 482 (512)
.++++|....+.|....|+.+.....+..++|.+.+.+.+..++...+.++.+..+. ......++||+..++.+
T Consensus 134 ~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~ 208 (463)
T KOG2816|consen 134 FAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKER 208 (463)
T ss_pred hhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccc
Confidence 688899999999999999999999999999999999999998876666665555444 44455677877655433
|
|
| >PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ] | Back alignment and domain information |
|---|
Probab=98.09 E-value=0.00038 Score=66.16 Aligned_cols=41 Identities=10% Similarity=-0.116 Sum_probs=33.0
Q ss_pred eeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 010375 409 WTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCS 449 (512)
Q Consensus 409 ~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~ 449 (512)
.++-+.+..|..-|+.+.+.|+..++|+---..+.-++.|.
T Consensus 427 ~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~ 467 (544)
T PF13000_consen 427 MAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDY 467 (544)
T ss_pred HHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhh
Confidence 45667888899999999999999999987666666666663
|
This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane |
| >PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.016 Score=56.85 Aligned_cols=113 Identities=12% Similarity=0.018 Sum_probs=76.4
Q ss_pred CcchhHHHHHHHHH-HHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhh---------ch---------------
Q 010375 81 DNQGLAAFTSSLYL-AGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAA---------AN--------------- 135 (512)
Q Consensus 81 s~~~~g~~~s~~~l-~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---------~~--------------- 135 (512)
+++.+..+-....+ ...+...+..++++|++|.+++-+.+..+.....+.++. ++
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~ 135 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFK 135 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHH
Confidence 45556666665555 445667889999999999998877666666555555542 11
Q ss_pred -------HHHHHHHHHHHhhhhhhccc-hhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 010375 136 -------LAMLLTGRILLGVGIGFGNQ-AVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINY 193 (512)
Q Consensus 136 -------~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~ 193 (512)
.|.+.+.-++.-+-...... .-..+..|.++.+|-.|..+++..+.++|.+++..+..
T Consensus 136 ~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~ 201 (491)
T PF03219_consen 136 GFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTS 201 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12233333333333333332 45778899999999999999999999999998887743
|
One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane |
| >PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters | Back alignment and domain information |
|---|
Probab=98.02 E-value=7.9e-05 Score=71.46 Aligned_cols=108 Identities=20% Similarity=0.343 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHHHHHHHHhh---ch------HHHHHHHHHHHhhhhhhccchhhhhhhhcCCCC---CchhHHHHHHHHH
Q 010375 114 ASIICGGISFLLGAALNAAA---AN------LAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTH---LRGGLNMMFQLAT 181 (512)
Q Consensus 114 ~~l~~~~~~~~~~~~~~~~~---~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~ 181 (512)
|+++++.++..+|.++..++ ++ .+.++++..+.++|.|+.-+...++.+|.++++ +|.+.+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 57888999999999885544 22 268899999999999999999999999999865 3566788899999
Q ss_pred HHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhc
Q 010375 182 TLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGIL 223 (512)
Q Consensus 182 ~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~ 223 (512)
++|..++..+ .....++.+|.+.|.+.++..+++.+..+.
T Consensus 82 n~G~~~~~~~--~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTL--VPYIQQNYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHC--CCHHHHCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhccc--chhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence 9999999888 666667889999999998888877766544
|
The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C. |
| >KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.01 E-value=0.0029 Score=59.17 Aligned_cols=91 Identities=11% Similarity=0.013 Sum_probs=49.5
Q ss_pred hHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHH---HhhcccCCCchhHHHHhhH
Q 010375 135 NLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMIN---YGTQKLETWGWRLSLGLAA 211 (512)
Q Consensus 135 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~---~~~~~~~~~~Wr~~f~~~~ 211 (512)
.+...++.-.+.+++.|......+...++. |++.-+ -+..+.++++.+...+. .........+=..-|.+..
T Consensus 116 ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~-P~~ytq----avm~G~a~aG~l~Sl~~i~tka~~~~~~~sA~~yF~~s~ 190 (406)
T KOG1479|consen 116 FFLVTLIIVVLLNLANAVVQGSLYGLAGLF-PSEYTQ----AVMSGQALAGTLTSLLRILTKAAFSDSRTSALIYFITST 190 (406)
T ss_pred hHHHHHHHHHHHhhhhhhhccchhhhhhcC-CHHHHH----HHHhcchhHhHHHHHHHHHHHHhcCCCCceeehhHHHHH
Confidence 456666777888888888887777766664 555432 23334444444443331 1111111122223355555
Q ss_pred HHHHHHHHHhhccCCChhH
Q 010375 212 APALMMTVGGILLPETPNS 230 (512)
Q Consensus 212 ~~~~~~~~~~~~~~e~p~~ 230 (512)
++.++++++...+|+.|-.
T Consensus 191 ~~~llC~i~y~~l~~lpf~ 209 (406)
T KOG1479|consen 191 VILLLCFVLYLVLPKLPFV 209 (406)
T ss_pred HHHHHHHHHHHHhhcchHH
Confidence 6666666666667777643
|
|
| >PF12832 MFS_1_like: MFS_1 like family | Back alignment and domain information |
|---|
Probab=97.97 E-value=5.9e-05 Score=52.97 Aligned_cols=65 Identities=15% Similarity=0.292 Sum_probs=54.9
Q ss_pred HHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhH
Q 010375 294 MFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGI 358 (512)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~ 358 (512)
.+..+.....+.-|.|.+.++.|+++.+.|.+..+..+..+++.++.|.++||.++++.......
T Consensus 9 yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~ 73 (77)
T PF12832_consen 9 YFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSL 73 (77)
T ss_pred HHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHH
Confidence 34444456677778888899999999999999999999999999999999999999887765543
|
|
| >KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.0022 Score=64.21 Aligned_cols=144 Identities=16% Similarity=0.151 Sum_probs=111.6
Q ss_pred CccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhh-chhHHHHHHHHHHHHHHHHHHhhch-------------------
Q 010375 76 NYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDY-GRRASIICGGISFLLGAALNAAAAN------------------- 135 (512)
Q Consensus 76 ~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~~------------------- 135 (512)
+++|.+...+.-..+.+.-......+.+++++|-| ||-+++.++.++..++.++..++..
T Consensus 66 ~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~ 145 (571)
T KOG1237|consen 66 LELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCE 145 (571)
T ss_pred HHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCccc
Confidence 33476777777788888888888889999999975 8889999999998888766554311
Q ss_pred ------HHHHHHHHHHHhhhhhhccchhhhhhhhcCC---CC---CchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCch
Q 010375 136 ------LAMLLTGRILLGVGIGFGNQAVPLYLSEMAP---TH---LRGGLNMMFQLATTLGIFTANMINYGTQKLETWGW 203 (512)
Q Consensus 136 ------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~---~~---~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~W 203 (512)
...++.+.-+..+|.|+.-+...++-+|-++ ++ .+...+.++....++|..++..+ ....-++.+|
T Consensus 146 ~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~--~vyiq~~~~w 223 (571)
T KOG1237|consen 146 SPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTV--LVYIQDNVGW 223 (571)
T ss_pred CcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHH--HHhhhhcccc
Confidence 1356677788888999999999999999998 32 22367888888899999988887 5665567899
Q ss_pred hHHHHhhHHHHHHHHHHh
Q 010375 204 RLSLGLAAAPALMMTVGG 221 (512)
Q Consensus 204 r~~f~~~~~~~~~~~~~~ 221 (512)
.+-|.+..+..+++++++
T Consensus 224 ~lgf~i~~~~~~lai~iF 241 (571)
T KOG1237|consen 224 KLGFGIPTVLNALAILIF 241 (571)
T ss_pred eeeccHHHHHHHHHHHHH
Confidence 999988777766665554
|
|
| >PF12832 MFS_1_like: MFS_1 like family | Back alignment and domain information |
|---|
Probab=97.83 E-value=7.4e-05 Score=52.47 Aligned_cols=46 Identities=13% Similarity=0.221 Sum_probs=41.7
Q ss_pred cccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHH
Q 010375 78 CKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISF 123 (512)
Q Consensus 78 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~ 123 (512)
.|++..++|.+.++..+...++.+++|.++||+|+++.++....+.
T Consensus 30 ~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 30 LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 4999999999999999999999999999999999998887766543
|
|
| >TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.0012 Score=67.29 Aligned_cols=156 Identities=15% Similarity=0.104 Sum_probs=101.0
Q ss_pred HHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhh-cCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhH
Q 010375 310 VLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDK-LGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSIL 388 (512)
Q Consensus 310 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (512)
++.+.+|++...+...........-+..+++++++|+ +|+++.+.++.++..++..++.+... +.. ........
T Consensus 13 Yl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~----~~~-~~~~~~~~ 87 (654)
T TIGR00926 13 YFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAI----PSS-GHPLHDLL 87 (654)
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccC----ccc-ccchHHHH
Confidence 3344588888888777777777777788889999997 59999999998888888776665311 000 00011122
Q ss_pred HHHHHHHHHHHhhhcccceeeeeecccCChh---hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc-------chhhHHHH
Q 010375 389 VVVVICLFVLAFGWSWGPLGWTVPSEIFPLE---TRSAGQSITVAVNLFFTFVIAQIFLTLLCSF-------KFGIFLFF 458 (512)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~-------g~~~~~~~ 458 (512)
.+..+.+...+.+. .-|...+...|.++++ .+-....+.....++|+.+++.+.+++.+.. +|...+..
T Consensus 88 ~l~gLaLia~G~Gg-iKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i 166 (654)
T TIGR00926 88 DLLGLALIALGTGG-IKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGV 166 (654)
T ss_pred HHHHHHHHHhhccc-cccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHH
Confidence 33444444444443 3344456777777643 4677888888899999999999999887543 35555555
Q ss_pred HHHHHHHHHHHhh
Q 010375 459 AGWVTIMTIFVYF 471 (512)
Q Consensus 459 ~~~~~~~~~~~~~ 471 (512)
.+++.+++++.+.
T Consensus 167 ~~i~m~ia~lvf~ 179 (654)
T TIGR00926 167 PAILMILALIVFM 179 (654)
T ss_pred HHHHHHHHHHHHH
Confidence 5555555554444
|
|
| >COG3202 ATP/ADP translocase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.056 Score=51.86 Aligned_cols=112 Identities=10% Similarity=-0.015 Sum_probs=80.6
Q ss_pred CcchhHHHHHHHHH-HHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhh---------ch---------------
Q 010375 81 DNQGLAAFTSSLYL-AGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAA---------AN--------------- 135 (512)
Q Consensus 81 s~~~~g~~~s~~~l-~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---------~~--------------- 135 (512)
++..+.++-+...+ +..+..++.+++.+++.|.+++-..+..+....+++++. ++
T Consensus 59 gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l 138 (509)
T COG3202 59 GAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFL 138 (509)
T ss_pred cchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccc
Confidence 56777888888888 678899999999999999999888777777777777654 11
Q ss_pred --------HHHHHHHHHHHhhhhhhccc-hhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHH
Q 010375 136 --------LAMLLTGRILLGVGIGFGNQ-AVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMIN 192 (512)
Q Consensus 136 --------~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~ 192 (512)
.|..-+.-++.=+-.+.... .-.....|.+..+|-.|..+++..+.+++..++..+.
T Consensus 139 ~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~ 204 (509)
T COG3202 139 KWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVT 204 (509)
T ss_pred eeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 02222222322232222222 4455678889888989999999999999999888874
|
|
| >KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.001 Score=62.54 Aligned_cols=127 Identities=19% Similarity=0.057 Sum_probs=84.5
Q ss_pred cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhh--HHHHH
Q 010375 315 MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSI--LVVVV 392 (512)
Q Consensus 315 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 392 (512)
|| +...+-+...++.+..++..+.+-|+.||+|-|....++.....++..+=..... + . -++..+ .....
T Consensus 75 Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~----p--~-v~~~f~~~l~~~G 146 (480)
T KOG2563|consen 75 YG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSL----P--F-VPPLFRRPLTHTG 146 (480)
T ss_pred hc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccC----c--c-ccccchhhhhHHh
Confidence 66 6667778888999999999999999999999999999998888877765544321 0 0 001122 22222
Q ss_pred HHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 010375 393 ICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSF 450 (512)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~ 450 (512)
-.+....... ...++.-...--+|+++|+++..+..+.+.+|.+++..+-+.+..+.
T Consensus 147 q~iaa~Aq~F-im~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~ 203 (480)
T KOG2563|consen 147 QSIAAAAQPF-ILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSS 203 (480)
T ss_pred HHHHHHhhhH-hhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCC
Confidence 2222222111 11122223344579999999999999999999988887777666554
|
|
| >PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs) | Back alignment and domain information |
|---|
Probab=97.62 E-value=1.2e-05 Score=79.86 Aligned_cols=156 Identities=13% Similarity=-0.088 Sum_probs=1.1
Q ss_pred HHHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHH
Q 010375 292 MPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIIL 371 (512)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~ 371 (512)
+..+.+...........+.+-++++++..++|++.+..-++.++..++..++.+|..|-+.+-.+.++++++.+++.+..
T Consensus 10 ~~~~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPh 89 (539)
T PF03137_consen 10 LLGLFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPH 89 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccH
Confidence 33333343444444555666667999999999999999999999999999999998888888899999999888887654
Q ss_pred hhccCC----C-------------c----------------ccccchhhHHHHHHHHHHHHhhhc---ccceeeeeeccc
Q 010375 372 GLKFGP----N-------------Q----------------ELSKSFSILVVVVICLFVLAFGWS---WGPLGWTVPSEI 415 (512)
Q Consensus 372 ~~~~~~----~-------------~----------------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 415 (512)
...... . . .......+.....+++.....+++ ..++..+|+-|.
T Consensus 90 f~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDn 169 (539)
T PF03137_consen 90 FLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDN 169 (539)
T ss_dssp --------------------------------------------------------------SSS---------------
T ss_pred hhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccc
Confidence 332100 0 0 000111122223333333333333 345667899999
Q ss_pred CChhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010375 416 FPLETRSAGQSITVAVNLFFTFVIAQIFLTLL 447 (512)
Q Consensus 416 ~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~ 447 (512)
.+++..+...|+......+|-++|-.+.+...
T Consensus 170 v~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L 201 (539)
T PF03137_consen 170 VSKKNSPLYIGILYAMSILGPALGFLLGSFCL 201 (539)
T ss_dssp --------------------------------
T ss_pred cccccCccchhhhhHHhhccHHHHHHHHHHHH
Confidence 99999999999999988888877766666544
|
Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P. |
| >PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS) | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0025 Score=55.50 Aligned_cols=55 Identities=13% Similarity=0.091 Sum_probs=37.8
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHhhcc-----cCCCchhHHHHhhHHHHHHHHHHhhcc
Q 010375 168 HLRGGLNMMFQLATTLGIFTANMINYGTQK-----LETWGWRLSLGLAAAPALMMTVGGILL 224 (512)
Q Consensus 168 ~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~-----~~~~~Wr~~f~~~~~~~~~~~~~~~~~ 224 (512)
|+|+....+...+.++|.++.-.. .... .....|++.+.+.+++.++-+++..++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ip--F~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIP--FLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhh--HHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 667888888888899998877654 2222 112469999998888877666555443
|
|
| >PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0061 Score=49.52 Aligned_cols=113 Identities=18% Similarity=0.093 Sum_probs=81.7
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHH
Q 010375 319 GDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVL 398 (512)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (512)
.........+......+..++.+.+.+++|.|+.++++.+...+-...... +..+..+....+.+.
T Consensus 36 ~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~--------------~~~~~l~~~s~l~G~ 101 (156)
T PF05978_consen 36 AGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFY--------------PNSYTLYPASALLGF 101 (156)
T ss_pred ccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh--------------hhHHHHHHHHHHHhh
Confidence 334445566677777888888999999999999999987766644433322 224566667777777
Q ss_pred HhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 010375 399 AFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTL 446 (512)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~ 446 (512)
+.+..+... -.++.+...++.+++-.++.-.+...+.++|..+.-.+
T Consensus 102 ~~a~lW~aq-g~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 102 GAALLWTAQ-GTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred hhHHhhHhh-hHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777776665 35667888889999999998888888877777665443
|
UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein []. |
| >KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0021 Score=64.88 Aligned_cols=196 Identities=10% Similarity=0.002 Sum_probs=126.3
Q ss_pred HHHHHHHHHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHH
Q 010375 286 LVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQV 365 (512)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~ 365 (512)
++.+..+..+........+......+-++++++..+.|++....-++..+......+...|..|-+++-++.++++++.+
T Consensus 98 fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsl 177 (735)
T KOG3626|consen 98 FLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSL 177 (735)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHH
Confidence 34444444544444334444444555455999999999999999999999999999999999998999999999999988
Q ss_pred HHHHHHhhcc--------------CC------------------Ccccc---cchhhHHHHHHHHHHHHhhhc---ccce
Q 010375 366 IVSIILGLKF--------------GP------------------NQELS---KSFSILVVVVICLFVLAFGWS---WGPL 407 (512)
Q Consensus 366 ~~~~~~~~~~--------------~~------------------~~~~~---~~~~~~~~~~~~~~~~~~~~~---~~~~ 407 (512)
+..+.....- .+ ..... ........+.+++..+..+++ ..++
T Consensus 178 l~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tl 257 (735)
T KOG3626|consen 178 LFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTL 257 (735)
T ss_pred HHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccC
Confidence 8877643210 00 00000 011111222223333333333 3456
Q ss_pred eeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc------------------c-hhhHHHHHHHHHHHHHH
Q 010375 408 GWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSF------------------K-FGIFLFFAGWVTIMTIF 468 (512)
Q Consensus 408 ~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~------------------g-~~~~~~~~~~~~~~~~~ 468 (512)
..+|+-|...++......|+..+...+|-++|-.+.+.....+ | |+.-+++.+.+.+...+
T Consensus 258 GisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~ 337 (735)
T KOG3626|consen 258 GISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAV 337 (735)
T ss_pred CCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHH
Confidence 6788888888888889999999998888887777776655421 1 44455556666666666
Q ss_pred HhhccccCCCCCH
Q 010375 469 VYFFLPETKGVPI 481 (512)
Q Consensus 469 ~~~~~~~~~~~~~ 481 (512)
.++++|+...++.
T Consensus 338 p~f~fPk~lp~~~ 350 (735)
T KOG3626|consen 338 PLFFFPKELPKSQ 350 (735)
T ss_pred HHHhCcccCcccc
Confidence 6677776655443
|
|
| >TIGR00769 AAA ADP/ATP carrier protein family | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.015 Score=56.79 Aligned_cols=129 Identities=9% Similarity=-0.016 Sum_probs=79.1
Q ss_pred chhhHHHHHHHHHHHHH-HHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccC---CCc-------ccccc----
Q 010375 320 DASLYSSAMTGAVLASS-TLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFG---PNQ-------ELSKS---- 384 (512)
Q Consensus 320 ~~~~~~~~~~~~~~~~~-~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------~~~~~---- 384 (512)
+...++.....+...+. .++.+++++|++|++.+..........+.++.+...-... ++. ..+.+
T Consensus 43 e~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~ 122 (472)
T TIGR00769 43 EIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGF 122 (472)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHH
Confidence 34555555444444444 7888999999999998877666666555555554321100 000 00000
Q ss_pred ----hhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010375 385 ----FSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLC 448 (512)
Q Consensus 385 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~ 448 (512)
..|....+....-.......+-+.|.+++|.+..++..+-.++....+++|..+++.+...+.+
T Consensus 123 i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 123 IAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0122222222222222222233668899999999999999999999999999999998888763
|
These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers. |
| >PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX) | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.019 Score=54.43 Aligned_cols=159 Identities=14% Similarity=0.077 Sum_probs=96.1
Q ss_pred HhhHHHHHHh-cCCCCchhhHHHHHH-HHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccc
Q 010375 305 LFYAPVLFQS-MGFKGDASLYSSAMT-GAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELS 382 (512)
Q Consensus 305 ~~~~~~~~~~-~g~~~~~~~~~~~~~-~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (512)
.+..|++.+. .|++..+..--..+. .-..++..+....+.|.++.|++++.+.+...+...++.+..
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~----------- 92 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGT----------- 92 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHC-----------
Confidence 4445566555 788877765333333 334555666778899999999999988877666666655532
Q ss_pred cchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc--hhhHHHHHH
Q 010375 383 KSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK--FGIFLFFAG 460 (512)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g--~~~~~~~~~ 460 (512)
.....-+.-+..+...+.-. ..++++=...|+++--++.+.......+|.+++..++-.+....+ +.....+..
T Consensus 93 --sv~~mq~~q~~yg~~~a~ev--ay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl 168 (412)
T PF01770_consen 93 --SVLAMQLMQFFYGLATAAEV--AYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISL 168 (412)
T ss_pred --cHHHHHHHHHHHHHHHHHHH--HHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 12233333333333333211 122333345577777788888888888888888877776665433 444444455
Q ss_pred HHHHHHHHHhhccccCCC
Q 010375 461 WVTIMTIFVYFFLPETKG 478 (512)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~ 478 (512)
....++++..+++|..++
T Consensus 169 ~~~~~a~~~~~fLP~~~~ 186 (412)
T PF01770_consen 169 ASVSLALLIALFLPMPKR 186 (412)
T ss_pred HHHHHHHHHHHHcCCCCc
Confidence 555556666667776543
|
Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane |
| >PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0038 Score=60.97 Aligned_cols=156 Identities=19% Similarity=0.194 Sum_probs=89.5
Q ss_pred HHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhc-----CChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccc
Q 010375 308 APVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKL-----GRRALLISGGIQMITCQVIVSIILGLKFGPNQELS 382 (512)
Q Consensus 308 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (512)
.+++.+++|+++.+.........+--. ..++.|.++|-+ .||..+.++.++..++...+..... .
T Consensus 13 ~~~l~~~l~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~---------~ 82 (433)
T PF03092_consen 13 YPFLKDDLGLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPA---------S 82 (433)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhccc---------c
Confidence 345556699998887766655554433 467899999987 2455555565555444444443211 0
Q ss_pred cchhhHHHHHHHHHHHHhhhcccceeeeeecccC---ChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHH
Q 010375 383 KSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIF---PLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFA 459 (512)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~ 459 (512)
........+.+.+...+....- .+.-++..|.. |.+ ++...+.......+|+.++..+.|.+.+..++...+.+.
T Consensus 83 ~~s~~~~~~~l~la~~g~a~~D-V~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~ 160 (433)
T PF03092_consen 83 ESSAAIAVVLLFLASFGYAFAD-VAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLIS 160 (433)
T ss_pred cchhhhHHHHHHHHHHHHHHHH-HhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHH
Confidence 0112222223333333333221 12234445555 444 788889999999999999999999999988765544444
Q ss_pred HHH-HHHHHHHhhcccc
Q 010375 460 GWV-TIMTIFVYFFLPE 475 (512)
Q Consensus 460 ~~~-~~~~~~~~~~~~~ 475 (512)
... .+..+...+..+|
T Consensus 161 ~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 161 AALPLLMLIVALFLLEE 177 (433)
T ss_pred HHHHHHHHHHHHHhhhh
Confidence 433 3333334444444
|
Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus). |
| >PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs | Back alignment and domain information |
|---|
Probab=97.08 E-value=9.4e-05 Score=68.60 Aligned_cols=118 Identities=8% Similarity=-0.075 Sum_probs=2.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhc
Q 010375 324 YSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWS 403 (512)
Q Consensus 324 ~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (512)
..+..+.++..+|+.+..+..-+..+++.+.+..+.=.+...++...............-++.+..++.+.+++...|..
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 35667889999999988874322112333333222222211111111110000000001123445555566666665533
Q ss_pred ccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHH
Q 010375 404 WGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQI 442 (512)
Q Consensus 404 ~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~ 442 (512)
.++.+.+..+..++++|..+-.+....-.+|-.+|..+
T Consensus 266 -~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 266 -STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp --HHHH---------------------------------
T ss_pred -hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556777888888888877777666666666665544
|
Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A. |
| >PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1 | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.043 Score=52.95 Aligned_cols=168 Identities=10% Similarity=-0.070 Sum_probs=85.5
Q ss_pred HHHHHHhhchhHHHhhHHHHHHh-cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHH
Q 010375 292 MPMFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSII 370 (512)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~ 370 (512)
...+.....--...+-.+.++.+ +.-+-.........-.+..++..+..|.+.||..|.+....+.+..-++..+-...
T Consensus 9 ~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~ 88 (432)
T PF06963_consen 9 LSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCAL 88 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHH
Confidence 33344444445566666777666 33344445556666677788888889999999999888776655433333222221
Q ss_pred HhhccCCCccc--ccchhhHHHHHHHHHHHHhhhcccceeee----eecccC--ChhhhhhHHHHHHHHHHHHHHHHHHH
Q 010375 371 LGLKFGPNQEL--SKSFSILVVVVICLFVLAFGWSWGPLGWT----VPSEIF--PLETRSAGQSITVAVNLFFTFVIAQI 442 (512)
Q Consensus 371 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~--p~~~~~~~~g~~~~~~~~g~~~~~~~ 442 (512)
........... .............+.+.....+......+ ++..+. +++.....++...-+-.+...++|.+
T Consensus 89 ~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~ 168 (432)
T PF06963_consen 89 FLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLF 168 (432)
T ss_pred HHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 11100010000 01111111222222222111111111111 111222 34455566666666667889999999
Q ss_pred HHHHHhhcchhhHHHHH
Q 010375 443 FLTLLCSFKFGIFLFFA 459 (512)
Q Consensus 443 ~~~~~~~~g~~~~~~~~ 459 (512)
.|.+.+..+......+.
T Consensus 169 vG~l~t~~s~~~~~~~i 185 (432)
T PF06963_consen 169 VGLLMTFASPVIAAIFI 185 (432)
T ss_pred HHHHhhccCHHHHHHHH
Confidence 99999877755444433
|
It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane |
| >PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0076 Score=42.76 Aligned_cols=69 Identities=10% Similarity=0.057 Sum_probs=59.3
Q ss_pred hHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHH
Q 010375 302 NSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSII 370 (512)
Q Consensus 302 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~ 370 (512)
..+.-.+|.+.++.++|..+.+++.+...++.++|.+...++.++.++++.+..+.+...+....+.+.
T Consensus 9 FayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 9 FAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred HHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 345557899999999999999999999999999999999999998888888888888777777766664
|
Note that many members are hypothetical proteins. |
| >PRK03612 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.066 Score=53.47 Aligned_cols=135 Identities=16% Similarity=0.079 Sum_probs=77.4
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHH--HH-HHHHHH----HhhchH-HHHHHHHHHHhhhh
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGIS--FL-LGAALN----AAAANL-AMLLTGRILLGVGI 150 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~--~~-~~~~~~----~~~~~~-~~l~~~r~l~G~~~ 150 (512)
|-+..+.+.+.+++..|.++|+.+++++.++.-|+.. ..-+.+ .+ ++..+. ++...+ ..++..-++.++..
T Consensus 46 G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~ 124 (521)
T PRK03612 46 GDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGLLI 124 (521)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6688889999999999999999999988754333322 111111 11 111111 111111 22334456678888
Q ss_pred hhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHH
Q 010375 151 GFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALM 216 (512)
Q Consensus 151 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~ 216 (512)
|+..|....+..+... ++-++..|-......+|.++|.++.. ..+....|-....++.+.+.++
T Consensus 125 G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~-~vLlp~lG~~~t~~~~a~l~~~ 188 (521)
T PRK03612 125 GMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFP-FLLLPRLGLIRTAALTGSLNLL 188 (521)
T ss_pred HHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHH-HHHHHhcchHHHHHHHHHHHHH
Confidence 8888887776665432 23456677777788888888887742 2233334433333344444333
|
|
| >PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.019 Score=54.38 Aligned_cols=108 Identities=14% Similarity=0.050 Sum_probs=79.7
Q ss_pred CcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHH-----HHHHHHHHhhchHHHHHHHHHHHhhhhhhccc
Q 010375 81 DNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISF-----LLGAALNAAAANLAMLLTGRILLGVGIGFGNQ 155 (512)
Q Consensus 81 s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~-----~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~ 155 (512)
..++..+....|.+|..++.--...+ |+ |++.+.+.+-. .+.....-+.++.|..++.-+..|+..|..++
T Consensus 279 ~r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YV 354 (402)
T PF02487_consen 279 PRDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYV 354 (402)
T ss_pred HHHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHH
Confidence 45677788888888877765433222 33 33333322222 22222333468899999999999999999999
Q ss_pred hhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHH
Q 010375 156 AVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMIN 192 (512)
Q Consensus 156 ~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~ 192 (512)
.....+.|-.++++|-.+++....+.++|..++.+++
T Consensus 355 NtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~ 391 (402)
T PF02487_consen 355 NTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLG 391 (402)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 9999999999999999999999999999999999984
|
The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane |
| >KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.0024 Score=60.09 Aligned_cols=157 Identities=13% Similarity=0.037 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhh----cCChhHHHHh-hHHH
Q 010375 286 LVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDK----LGRRALLISG-GIQM 360 (512)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~~~r~~~~~~-~~~~ 360 (512)
++....+..... +++..-..|.|.++++.|.+....+.......+.+++.+++.|..+|| +||||..+.. ....
T Consensus 34 li~v~~ia~Gvq-f~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i 112 (498)
T KOG0637|consen 34 LISVASIAAGVQ-FGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLI 112 (498)
T ss_pred HHHHHHHHHHHH-HHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHH
Confidence 333334433333 345566677888889999998888888888889999999999999996 6787776554 4444
Q ss_pred HHHHHHHHHHHhhccCCCccccc----chhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhh-HHHHHHHHHHHH
Q 010375 361 ITCQVIVSIILGLKFGPNQELSK----SFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSA-GQSITVAVNLFF 435 (512)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~g~~~~~~~~g 435 (512)
.++++++...........++... ......++.+.+.-+.......|. -++..|+..++.+.+ +++....+..+|
T Consensus 113 ~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~-ra~L~Dl~~~d~~~~~Ans~f~~f~avG 191 (498)
T KOG0637|consen 113 AVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPC-RALLADLARGDAKKTRANSVFSFFMAVG 191 (498)
T ss_pred HHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhH-HHHHHHhccChhhhhccchhHHHHHHhc
Confidence 55555444443222111111111 112233334444444554555565 577788887666666 888888888888
Q ss_pred HHHHHHHHH
Q 010375 436 TFVIAQIFL 444 (512)
Q Consensus 436 ~~~~~~~~~ 444 (512)
+.++-...+
T Consensus 192 nvLGY~~g~ 200 (498)
T KOG0637|consen 192 NVLGYALGS 200 (498)
T ss_pred ceeeeeccc
Confidence 776655444
|
|
| >KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.22 Score=46.96 Aligned_cols=184 Identities=12% Similarity=0.117 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHH
Q 010375 287 VMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVI 366 (512)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~ 366 (512)
.+.+++........++.+.+-.+++.+.+-.+.. +........+.+.+..++...+--+...|....++..+.....++
T Consensus 20 ~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~-~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~~~~~~~l~~~~il~ 98 (406)
T KOG1479|consen 20 YLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN-SKNFTSSYTLAAQIPLLLFNLLNAFLNTRLRTRVGYLLSLIAILF 98 (406)
T ss_pred HHHHHHHhcccccchHhhhccHHHHHhhcCCCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555555566778888888888777433333 444455555555555555555554443332222222222222222
Q ss_pred HHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 010375 367 VSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTL 446 (512)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~ 446 (512)
.......... .+......-...++.+.+.+.+.+...+++ +... ..+|++.....++-.+..+.+.+ +.-.+....
T Consensus 99 i~~l~~~~v~-~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~-~G~a-~~~P~~ytqavm~G~a~aG~l~S-l~~i~tka~ 174 (406)
T KOG1479|consen 99 IVTLDLALVK-TDTWTNGFFLVTLIIVVLLNLANAVVQGSL-YGLA-GLFPSEYTQAVMSGQALAGTLTS-LLRILTKAA 174 (406)
T ss_pred HHHHHHHhhc-cCCccchhHHHHHHHHHHHhhhhhhhccch-hhhh-hcCCHHHHHHHHhcchhHhHHHH-HHHHHHHHh
Confidence 2211111100 111111222333444444555555444444 4453 55777765443333222222222 111222222
Q ss_pred Hhh--cchhhHHHHHHHHHHHHHHHhhcccc
Q 010375 447 LCS--FKFGIFLFFAGWVTIMTIFVYFFLPE 475 (512)
Q Consensus 447 ~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~ 475 (512)
.+. .+...++....+..+++++++..+++
T Consensus 175 ~~~~~~sA~~yF~~s~~~~llC~i~y~~l~~ 205 (406)
T KOG1479|consen 175 FSDSRTSALIYFITSTVILLLCFVLYLVLPK 205 (406)
T ss_pred cCCCCceeehhHHHHHHHHHHHHHHHHHhhc
Confidence 221 23455666666666777777665443
|
|
| >KOG3098 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.21 Score=48.46 Aligned_cols=102 Identities=18% Similarity=0.240 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHHhhhhhhh---hhchhHHHHHHHHHHHHHHHHHHhh------------------chHHHHHHHHHHHh
Q 010375 89 TSSLYLAGLVASFVASPVTR---DYGRRASIICGGISFLLGAALNAAA------------------ANLAMLLTGRILLG 147 (512)
Q Consensus 89 ~s~~~l~~~i~~~~~g~l~d---r~Grr~~l~~~~~~~~~~~~~~~~~------------------~~~~~l~~~r~l~G 147 (512)
.-...+|..+++.+.+.+++ |+||++.+.++..+..++.++.-.+ +++...++.-++.|
T Consensus 285 ~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G 364 (461)
T KOG3098|consen 285 SIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLG 364 (461)
T ss_pred HHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHh
Confidence 33344555666666777775 5899999999998888888876553 13557777889999
Q ss_pred hhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHH
Q 010375 148 VGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMI 191 (512)
Q Consensus 148 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~ 191 (512)
++-+......+.++.+.+ +++|..+.++...-..++..++...
T Consensus 365 ~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~ 407 (461)
T KOG3098|consen 365 FGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFF 407 (461)
T ss_pred hHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999 6778888888888888877766554
|
|
| >KOG3097 consensus Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.9 Score=41.42 Aligned_cols=99 Identities=22% Similarity=0.329 Sum_probs=67.9
Q ss_pred HHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhhhhhcCCC--CC
Q 010375 92 LYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPT--HL 169 (512)
Q Consensus 92 ~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~--~~ 169 (512)
.++..+..+++.+.+..++|-|.++.++...+...... =+-+.+..++-.-.+.|++.+..+..--+++++.-.. ++
T Consensus 67 ~y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~-Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~ 145 (390)
T KOG3097|consen 67 LYLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAA-NLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQ 145 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh-hcchhHHhhccHHHhhccccccccccCcceecHHHHHHHHh
Confidence 34455666666779999999999999988877653322 2447788999999999999999988877777655422 23
Q ss_pred c-------------hhHHHHHHHHHHHHHHHHHHH
Q 010375 170 R-------------GGLNMMFQLATTLGIFTANMI 191 (512)
Q Consensus 170 r-------------~~~~~~~~~~~~lG~~~~~~~ 191 (512)
| +....+++.+...|..+...+
T Consensus 146 ~~~q~~~~~~~~ffg~Ffii~~~~qv~gn~issli 180 (390)
T KOG3097|consen 146 RGEQAGDGMKVRFFGEFFIIFQCAQVWGNLISSLI 180 (390)
T ss_pred hhhhccCceeeeehhHHHHHHHHHHHHHHHHHHHH
Confidence 3 234455555555555555544
|
|
| >COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.25 Score=45.44 Aligned_cols=135 Identities=17% Similarity=0.122 Sum_probs=83.3
Q ss_pred HHHhhHHHHHHhcCCCC--chhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcc
Q 010375 303 SILFYAPVLFQSMGFKG--DASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQE 380 (512)
Q Consensus 303 ~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (512)
......+.+..+.+.+. ...+.......+...++.++.|.+.||.|||+.+..+......+........
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~--------- 90 (338)
T COG0477 20 LLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAP--------- 90 (338)
T ss_pred hHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCc---------
Confidence 34445555655655554 3678888888888888889999999999999777666554233322222211
Q ss_pred cccchhhHHHHHHHHHHHHhhhcccceeeeeecccCCh-hhhhhHHHHHHH-HHHHHHHHHHHHHHHHHhh
Q 010375 381 LSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPL-ETRSAGQSITVA-VNLFFTFVIAQIFLTLLCS 449 (512)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~g~~~~-~~~~g~~~~~~~~~~~~~~ 449 (512)
....+..+......+.+.+ ...+....+..|..|+ +.|+...+.... ...++..+++.+.+.+...
T Consensus 91 --~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 91 --NVGLALLLILRLLQGLGGG-GLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred --cchHHHHHHHHHHHHhhhH-HHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0112222222222333333 3344446777888887 678888888888 5777778888666666554
|
|
| >PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.15 Score=48.99 Aligned_cols=119 Identities=8% Similarity=-0.013 Sum_probs=79.6
Q ss_pred hHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChh---hhhhHHHH
Q 010375 351 ALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLE---TRSAGQSI 427 (512)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~~~g~ 427 (512)
+++.++.++..++.+++.+....... ..........+.+.+...+.+ +.-|....+..|.++++ .|......
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~----~~~~~~~~~~~gL~lia~G~G-~~K~ni~~~~~dq~~~~~~~~~~~~F~~ 76 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSL----PSGIQLGLFYIGLALIAVGTG-GIKPNISPFGADQYDEDDDSRRDSFFNW 76 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC----------CHHHHHHHHHHHHHH-CCHHHHHHHHHHCSSTTTTTHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchh----hhhHHHHHHHHHHHHHHhccc-cccccHHHHHHHHhcccchhhhhhhHHH
Confidence 46677888888888876665421110 011123445555555555555 44444457778888655 56677888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhhccc
Q 010375 428 TVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLP 474 (512)
Q Consensus 428 ~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 474 (512)
.....++|+.++....+++.++.+|...+.+..++.+++++.++.-+
T Consensus 77 fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~ 123 (372)
T PF00854_consen 77 FYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGR 123 (372)
T ss_dssp HHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCC
Confidence 88999999999999999999999999988888888888887766554
|
The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C. |
| >PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions | Back alignment and domain information |
|---|
Probab=94.90 E-value=0.93 Score=44.78 Aligned_cols=117 Identities=15% Similarity=0.052 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhh---ccCCCcc-------cccch--------hhHHHHHH
Q 010375 332 VLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGL---KFGPNQE-------LSKSF--------SILVVVVI 393 (512)
Q Consensus 332 ~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-------~~~~~--------~~~~~~~~ 393 (512)
..++...+..++++++++.++...........+.++++...= ...++.. .+... .|......
T Consensus 71 ~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfY 150 (491)
T PF03219_consen 71 VAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFY 150 (491)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHH
Confidence 344556678899999999988776655555555555444320 0111100 00000 11111222
Q ss_pred HHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010375 394 CLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLC 448 (512)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~ 448 (512)
+..-........-+-|.+++|..+.++..+-.++....+++|.++++.+...+.+
T Consensus 151 v~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 151 VMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222222223458889999999999999999999999999999998888776
|
One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane |
| >COG3202 ATP/ADP translocase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=94.71 E-value=1.4 Score=42.60 Aligned_cols=131 Identities=10% Similarity=-0.030 Sum_probs=80.4
Q ss_pred CchhhHHHHHHHH-HHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhc---cCCCc--------ccccc--
Q 010375 319 GDASLYSSAMTGA-VLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLK---FGPNQ--------ELSKS-- 384 (512)
Q Consensus 319 ~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--------~~~~~-- 384 (512)
++....+-...-+ ++++..++..++.+++.+.+............++++++..+=. ..+++ ..+..
T Consensus 60 ae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~ 139 (509)
T COG3202 60 AESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLK 139 (509)
T ss_pred chhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccce
Confidence 4444444444444 5667778888999999998888776666666666655544310 01110 00101
Q ss_pred ------hhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 010375 385 ------FSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCS 449 (512)
Q Consensus 385 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~ 449 (512)
..|.......+.-.-......-+.+..++|....++..+-.++.+...+++..++..+..++.++
T Consensus 140 ~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 140 WFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred eeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 01222233333222223233335577889999999999999999999999999999888887663
|
|
| >KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.55 E-value=2.5 Score=42.76 Aligned_cols=165 Identities=10% Similarity=0.009 Sum_probs=94.3
Q ss_pred HhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhc-CChhHHHHhhHHHHHHHHHHHHHHhhccCC------
Q 010375 305 LFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKL-GRRALLISGGIQMITCQVIVSIILGLKFGP------ 377 (512)
Q Consensus 305 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 377 (512)
.....++...++.+...+.-.............+++++++|.+ ||-+++.++.++..++..++..........
T Consensus 58 ~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~ 137 (571)
T KOG1237|consen 58 SNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKF 137 (571)
T ss_pred hHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccC
Confidence 4445555556777766666666666666777778899999985 888888888888888877776655433111
Q ss_pred --Cc-ccccchh-hHHHHHHHHHHHH-hhhcccceeeeeecccCCh----hhhh--hHHHHHHHHHHHHHHHHHHHHHHH
Q 010375 378 --NQ-ELSKSFS-ILVVVVICLFVLA-FGWSWGPLGWTVPSEIFPL----ETRS--AGQSITVAVNLFFTFVIAQIFLTL 446 (512)
Q Consensus 378 --~~-~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~----~~~~--~~~g~~~~~~~~g~~~~~~~~~~~ 446 (512)
.. ....... ...+....+.... ...+.-+....+-+|.++. +.+. .-+.......++|..++..+..+.
T Consensus 138 ~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyi 217 (571)
T KOG1237|consen 138 KPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYI 217 (571)
T ss_pred CCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhh
Confidence 00 0011111 1112222222222 1223344445677777772 2222 456666677778888887777777
Q ss_pred HhhcchhhHHHHHHHHHHHHHHH
Q 010375 447 LCSFKFGIFLFFAGWVTIMTIFV 469 (512)
Q Consensus 447 ~~~~g~~~~~~~~~~~~~~~~~~ 469 (512)
-++.+|..-+-...++...++++
T Consensus 218 q~~~~w~lgf~i~~~~~~lai~i 240 (571)
T KOG1237|consen 218 QDNVGWKLGFGIPTVLNALAILI 240 (571)
T ss_pred hhcccceeeccHHHHHHHHHHHH
Confidence 67777655444444444443333
|
|
| >PRK03612 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=94.42 E-value=1.5 Score=43.98 Aligned_cols=143 Identities=11% Similarity=0.039 Sum_probs=67.1
Q ss_pred cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhH--HHHHHHHHHHHHHhhccCCCcccccchhhHHHHH
Q 010375 315 MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGI--QMITCQVIVSIILGLKFGPNQELSKSFSILVVVV 392 (512)
Q Consensus 315 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (512)
+|-+....+.+.+.+.++..+|+.+++++.++..++....-..+ +..++..++...... ...........
T Consensus 45 ~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~~~~~--------~~~~~~~~~~~ 116 (521)
T PRK03612 45 LGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYAAFAF--------QGLSRLLLYVL 116 (521)
T ss_pred hCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHH
Confidence 67677777777888888888888887776533222221111111 011111111111100 00111111222
Q ss_pred HHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHh-hcch-hhHHHHHHHHHHHHH
Q 010375 393 ICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLC-SFKF-GIFLFFAGWVTIMTI 467 (512)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~-~~g~-~~~~~~~~~~~~~~~ 467 (512)
.++..+..+.. .|+..-+..+ ...+..+...|-....+.+|+++|+.+.+.+.- ..|. ...++++.+.+++++
T Consensus 117 ~~~~~~l~G~~-~Pl~~~~~~~-~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~ 191 (521)
T PRK03612 117 VLLIGLLIGME-IPLLMRILQR-IRDQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAAL 191 (521)
T ss_pred HHHHHHHHHHH-HHHHHHHHHh-ccccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 22223333322 3332222211 111234567788889999999999999887754 4553 333444444444443
|
|
| >KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.50 E-value=0.12 Score=46.25 Aligned_cols=133 Identities=13% Similarity=0.011 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhhhhhcC
Q 010375 86 AAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMA 165 (512)
Q Consensus 86 g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 165 (512)
|.+.-+-.+-..+-.+....+.||+---.=+.+..++.+.+.++.+++++.++-+++-.+..++.|.......++.+. +
T Consensus 65 g~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~-Y 143 (409)
T KOG3880|consen 65 GAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSR-Y 143 (409)
T ss_pred chhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhcc-C
Confidence 344444455556666666777888643333445566778888889999999999999999999998887666654443 3
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhc
Q 010375 166 PTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGIL 223 (512)
Q Consensus 166 ~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~ 223 (512)
++ ...+.+..+.+.++++|..--.......+.+-|...++...+.++..+..++
T Consensus 144 ~~----~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~ 197 (409)
T KOG3880|consen 144 PS----IVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFF 197 (409)
T ss_pred CC----ceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHh
Confidence 33 2345555666666666655411122213455677777766655555555444
|
|
| >KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.23 E-value=1.8 Score=40.58 Aligned_cols=64 Identities=20% Similarity=0.174 Sum_probs=36.4
Q ss_pred HHHHHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHh-----hcCChhHHHHh
Q 010375 290 IFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVD-----KLGRRALLISG 356 (512)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-----~~~~r~~~~~~ 356 (512)
....+..+...++... ..|.+++..|.|-.+.+.......=. --.++...++| |+||||..++-
T Consensus 36 Ll~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay~P~--sLKllWaPiVDs~y~k~~GrrksWvvp 104 (510)
T KOG3574|consen 36 LLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAYWPF--SLKLLWAPIVDSVYSKRFGRRKSWVVP 104 (510)
T ss_pred HHHHHHHcCCchhHhh-hhHHHhcCCCcchhhhhhhhhhhhHH--HHHHHHHhhhHHHHHHhhccccceeee
Confidence 3334444544444444 88999987777766555443332211 12345555666 89998876543
|
|
| >TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT) | Back alignment and domain information |
|---|
Probab=91.98 E-value=6 Score=38.77 Aligned_cols=32 Identities=16% Similarity=0.322 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHhhhcccceeeeeecccCChhhhh
Q 010375 389 VVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRS 422 (512)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 422 (512)
.+..+++.+.+.+...+.. +.+. ..+|++..+
T Consensus 109 ~~~~v~~~g~~~~~~q~s~-~gla-~~fp~~~~~ 140 (437)
T TIGR00939 109 TMASVVIINSGMALLQGSL-FGLA-GVFPSTYSS 140 (437)
T ss_pred HHHHHHHHHhhhhhhcccc-hhhc-ccCCHHHHH
Confidence 3334444444444443333 4554 567876544
|
|
| >PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ] | Back alignment and domain information |
|---|
Probab=90.94 E-value=3.3 Score=40.42 Aligned_cols=63 Identities=17% Similarity=0.027 Sum_probs=31.9
Q ss_pred HHHHhhchhHHHhhHHHHHHh--cCCCCchhhHHHHH--HHHHHHHHHHHH-HHHHhhcCChhHHHHh
Q 010375 294 MFQILTGINSILFYAPVLFQS--MGFKGDASLYSSAM--TGAVLASSTLIS-IATVDKLGRRALLISG 356 (512)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~--~~~~~~~~~~~~-g~l~d~~~~r~~~~~~ 356 (512)
++.+....+...--.|.++++ .+.+-.+.+..... ..-.-++-+++. ...+.|+||||..++-
T Consensus 9 Y~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla~~PfSlKlLWaPiVDs~y~~~~GRRKSWiiP 76 (544)
T PF13000_consen 9 YFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLASYPFSLKLLWAPIVDSVYSKRIGRRKSWIIP 76 (544)
T ss_pred HHHcCcccccccccchhhhccccCCCChhHheeeeeeechhHHHHhhhhhhhhhcccccCCcchhhhH
Confidence 333433333333467888877 66665554433221 122223333333 3445688999876654
|
This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane |
| >KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.66 E-value=0.53 Score=43.60 Aligned_cols=124 Identities=14% Similarity=-0.027 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHH------hh------chHHHHHHHHHHHhhhhhh--ccch
Q 010375 91 SLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNA------AA------ANLAMLLTGRILLGVGIGF--GNQA 156 (512)
Q Consensus 91 ~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~------~~------~~~~~l~~~r~l~G~~~~~--~~~~ 156 (512)
.-.....+..++.|...|+..|+|++...+++--++.+.++ +. .++..+..+-++.-...+. ....
T Consensus 71 vesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~ 150 (503)
T KOG2601|consen 71 VESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASL 150 (503)
T ss_pred HHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHh
Confidence 33445567778888999999999998876655433333322 22 2444444443333222211 1111
Q ss_pred hhhh--hhhcC----CCCCch---hHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHH
Q 010375 157 VPLY--LSEMA----PTHLRG---GLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALM 216 (512)
Q Consensus 157 ~~~~--i~~~~----~~~~r~---~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~ 216 (512)
+.++ -.||. ..+.+. ++.+.....-..-.++.|.+ .+.+....+-|..-.+.++.+++
T Consensus 151 A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~Lapv~--tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 151 AGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNLLAPVI--TGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred hheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhchhhhh--hcccceeechhhhhhhhHHHHHH
Confidence 1111 12332 223333 33455555566667788877 55555555666655444444444
|
|
| >KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.15 E-value=8.4 Score=34.33 Aligned_cols=136 Identities=13% Similarity=0.051 Sum_probs=86.8
Q ss_pred chhHHHHHHHHHHHHHHHHhhhhhhhhhchh--HHHHHHHHHHHHHHHHHHhh----c---hHHHHHHHHHHHhhhhhhc
Q 010375 83 QGLAAFTSSLYLAGLVASFVASPVTRDYGRR--ASIICGGISFLLGAALNAAA----A---NLAMLLTGRILLGVGIGFG 153 (512)
Q Consensus 83 ~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr--~~l~~~~~~~~~~~~~~~~~----~---~~~~l~~~r~l~G~~~~~~ 153 (512)
.-.|.+.+.+.+..++|+-+..++..|-..| ..+.+..++.++...+.... | +...-+++-.+.-.+.|..
T Consensus 282 iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlf 361 (454)
T KOG4332|consen 282 IPHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLF 361 (454)
T ss_pred CCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhc
Confidence 3468899999999999999998888765554 45555555555444433322 2 2223345556666778889
Q ss_pred cchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHH
Q 010375 154 NQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVG 220 (512)
Q Consensus 154 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~ 220 (512)
+|....+-+++.|+++|...+.++..-.++=..++-.. .-......+=|..|-++.+...+..+.
T Consensus 362 wPSimkmRsqyIPEearstimNfFRvPLnifvClvLyn--lh~~~~p~~tr~mf~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 362 WPSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYN--LHVDAFPTTTRNMFGICSAFLFVASIL 426 (454)
T ss_pred chHHHHHHHhhCCHHHHhhhhhheechhhHhhhhhhee--cccccCccccchhhhhhHHHHHHHHHH
Confidence 99999999999999999988888765444322221111 001111245677887777766665443
|
|
| >KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.51 E-value=3.2 Score=37.70 Aligned_cols=110 Identities=13% Similarity=0.077 Sum_probs=78.0
Q ss_pred chhHHHHHHHHHHHHHHHHhhhhhhhhh-chhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhhh
Q 010375 83 QGLAAFTSSLYLAGLVASFVASPVTRDY-GRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYL 161 (512)
Q Consensus 83 ~~~g~~~s~~~l~~~i~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i 161 (512)
.|.-|....|.+|..++.--....--++ ---.++..-.+++.+......+.++++..++.-+.-|+-.|..++...--+
T Consensus 288 sqYRwyqvlYQlGVFiSRSS~~~~~~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i 367 (409)
T KOG3880|consen 288 SQYRWYQVLYQLGVFISRSSINLFTMPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNI 367 (409)
T ss_pred hcchhhheeeeeeEEEEeccceEEechHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHH
Confidence 3566877777777544332211111110 001222334445555666677889999999999999998888888888888
Q ss_pred hhcCCCCCchhHHHHHHHHHHHHHHHHHHHH
Q 010375 162 SEMAPTHLRGGLNMMFQLATTLGIFTANMIN 192 (512)
Q Consensus 162 ~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~ 192 (512)
.+-.++++|-.+++....+.++|..++.+++
T Consensus 368 ~~e~~pd~rEfamsavs~sDS~Gi~lA~~la 398 (409)
T KOG3880|consen 368 HKETEPDVREFAMSAVSISDSIGIFLAGLLA 398 (409)
T ss_pred hhcCCchHHHHhHhhheecchhhHHHHHHHh
Confidence 8888899999999999999999999998883
|
|
| >KOG2881 consensus Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=82.22 E-value=31 Score=30.42 Aligned_cols=30 Identities=20% Similarity=0.272 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHhhcCChhHHHHhhHHHH
Q 010375 332 VLASSTLISIATVDKLGRRALLISGGIQMI 361 (512)
Q Consensus 332 ~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~ 361 (512)
+..++.+-+-+++.|+..|.+.+.+.++..
T Consensus 252 CT~lAVigGk~lAskIS~rtVt~~ggi~Fi 281 (294)
T KOG2881|consen 252 CTGLAVIGGKYLASKISVRTVTLIGGILFI 281 (294)
T ss_pred HHHHHHhhhHHHhhhheeEEEEEecchhHH
Confidence 333333334467888888877776655443
|
|
| >COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only] | Back alignment and domain information |
|---|
Probab=80.98 E-value=29 Score=32.37 Aligned_cols=84 Identities=18% Similarity=0.041 Sum_probs=58.9
Q ss_pred cCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHH----HHH-HHhh----chHHHHHHHHHHHhhhh
Q 010375 80 YDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLG----AAL-NAAA----ANLAMLLTGRILLGVGI 150 (512)
Q Consensus 80 ~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~----~~~-~~~~----~~~~~l~~~r~l~G~~~ 150 (512)
=+--|.+.+.+.|.....+|+...-++.|.--.-+.+..-+++..++ .++ ..|+ ++-+.+++.-++.|.-.
T Consensus 40 ~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~LV 119 (508)
T COG4262 40 GGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVLV 119 (508)
T ss_pred CceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 36788899999999999999999988887543333332222222221 111 1233 46678888999999999
Q ss_pred hhccchhhhhhhh
Q 010375 151 GFGNQAVPLYLSE 163 (512)
Q Consensus 151 ~~~~~~~~~~i~~ 163 (512)
|...|..+.++..
T Consensus 120 G~EiPL~mrml~~ 132 (508)
T COG4262 120 GAEIPLLMRMLQR 132 (508)
T ss_pred hcchHHHHHHHHH
Confidence 9999999998876
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 512 | ||||
| 4gby_A | 491 | The Structure Of The Mfs (Major Facilitator Superfa | 1e-36 |
| >pdb|4GBY|A Chain A, The Structure Of The Mfs (Major Facilitator Superfamily) Proton:xylose Symporter Xyle Bound To D-Xylose Length = 491 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 512 | |||
| 2gfp_A | 375 | EMRD, multidrug resistance protein D; membrane pro | 3e-04 |
| >2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Length = 375 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 3e-04
Identities = 37/153 (24%), Positives = 57/153 (37%), Gaps = 14/153 (9%)
Query: 82 NQGLAAFTSSLYLAGL-VASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLL 140
+G YL V+ P++ GRR I+ G F+L + ++L +L+
Sbjct: 33 REGAVQSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVAVTTSSLTVLI 92
Query: 141 TGRILLGVGIGFGN---QAVP--LYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGT 195
+ G+G G G + +P LY H LNM ++ L A +I G
Sbjct: 93 AASAMQGMGTGVGGVMARTLPRDLYERTQL-RHANSLLNMGILVSPLL----APLI--GG 145
Query: 196 QKLETWGWRLSLG-LAAAPALMMTVGGILLPET 227
W WR L A + +PET
Sbjct: 146 LLDTMWNWRACYLFLLVLCAGVTFSMARWMPET 178
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 512 | |||
| 4gc0_A | 491 | D-xylose-proton symporter; MFS, transport protein; | 100.0 | |
| 1pw4_A | 451 | Glycerol-3-phosphate transporter; transmembrane, i | 100.0 | |
| 3o7q_A | 438 | L-fucose-proton symporter; transporter, multi-PASS | 100.0 | |
| 4aps_A | 491 | DI-OR tripeptide H+ symporter; transport protein, | 100.0 | |
| 2gfp_A | 375 | EMRD, multidrug resistance protein D; membrane pro | 100.0 | |
| 2xut_A | 524 | Proton/peptide symporter family protein; transport | 99.96 | |
| 2cfq_A | 417 | Lactose permease; transport, transport mechanism, | 99.95 | |
| 3o7q_A | 438 | L-fucose-proton symporter; transporter, multi-PASS | 99.42 | |
| 1pw4_A | 451 | Glycerol-3-phosphate transporter; transmembrane, i | 99.38 | |
| 2cfq_A | 417 | Lactose permease; transport, transport mechanism, | 99.35 | |
| 4aps_A | 491 | DI-OR tripeptide H+ symporter; transport protein, | 99.33 | |
| 2gfp_A | 375 | EMRD, multidrug resistance protein D; membrane pro | 99.31 | |
| 2xut_A | 524 | Proton/peptide symporter family protein; transport | 99.31 | |
| 4gc0_A | 491 | D-xylose-proton symporter; MFS, transport protein; | 99.14 |
| >4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-49 Score=393.22 Aligned_cols=446 Identities=26% Similarity=0.468 Sum_probs=354.1
Q ss_pred CchHHHHHHHHHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHHh
Q 010375 23 VTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFV 102 (512)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~ 102 (512)
.+++.+.++++++++.+++|||.++++.+ +|.+.++|..+. ..+.+.+..+.|++.+++.+|..+|+++
T Consensus 6 ~~~y~~~i~~~a~lg~~~~Gyd~~~i~~~--~~~~~~~~~~~~---------~~~~~~~~~~~g~~~s~~~~G~~iG~~~ 74 (491)
T 4gc0_A 6 NSSYIFSITLVATLGGLLFGYDTAVISGT--VESLNTVFVAPQ---------NLSESAANSLLGFCVASALIGCIIGGAL 74 (491)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHGGGGT--HHHHHHHHTGGG---------CCCHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred ChHHHhhHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHhcCCC---------CCCcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567888888889999999999999876 677777774332 1122446778899999999999999999
Q ss_pred hhhhhhhhchhHHHHHHHHHHHHHHHHHH------------------hhchHHHHHHHHHHHhhhhhhccchhhhhhhhc
Q 010375 103 ASPVTRDYGRRASIICGGISFLLGAALNA------------------AAANLAMLLTGRILLGVGIGFGNQAVPLYLSEM 164 (512)
Q Consensus 103 ~g~l~dr~Grr~~l~~~~~~~~~~~~~~~------------------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 164 (512)
+|+++||+|||++++++.+++.+++++++ +++|++.++++|+++|++.|+..+....+++|+
T Consensus 75 ~G~laDr~GRk~~l~~~~~l~~i~~i~~a~~~~~~~~~~~~~~~~~~~a~~~~~l~~~R~l~G~g~G~~~~~~~~~i~E~ 154 (491)
T 4gc0_A 75 GGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAEL 154 (491)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHHHHHCTTTTTSCSSSSSSCCGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcchhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999998 478999999999999999999999999999999
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHHhhccc------CCCchhHHHHhhHHHHHHHHHHhhccCCChhHHHHcCCHH
Q 010375 165 APTHLRGGLNMMFQLATTLGIFTANMINYGTQKL------ETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKV 238 (512)
Q Consensus 165 ~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~------~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~ 238 (512)
.|+++|++..++.+.+..+|.++++.++...... ...+||+.+.+..++.++..+..+++||||+|+..+++.+
T Consensus 155 ~p~~~rg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~peSp~~L~~~~~~~ 234 (491)
T 4gc0_A 155 APAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMSRGKQE 234 (491)
T ss_dssp SCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTTTTHHHHHHHTTHHHHHHHHHHGGGSCCCHHHHHHTTCHH
T ss_pred CCHHhhhhhHHhhhhhhhhhhhhhhhcchhhccccccccccchhhHHHhhhhhhhhhhhhhhhhcCCCChHHHHHcCchh
Confidence 9999999999999999999999999885444322 2357999999999999988888899999999999999999
Q ss_pred HHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHhcCCC
Q 010375 239 EGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFK 318 (512)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 318 (512)
++++.+++..+.+..+++..+.++....+++.. ..... ...++.........+....+...+.+|.|.+.+..+.+
T Consensus 235 ~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (491)
T 4gc0_A 235 QAEGILRKIMGNTLATQAVQEIKHSLDHGRKTG-GRLLM---FGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKTLGAS 310 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-THHHH---SCCTHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSSCC
T ss_pred HHHHhHHHhcCCchhHHHHHHHHHHHHhhhhhh-hHHHH---hcccHHHHHHHHHHHHHHhhhhHHHhcchHHHHhcCCC
Confidence 999998887665544443333322222222111 11111 22334455666667777778888999999998888888
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHH
Q 010375 319 GDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVL 398 (512)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (512)
...........++..+++.++++++.||+|||+.+..+.....++++.+...... ....+..+..+.++..
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~l~dr~Grr~~~~~~~~~~~~~~~~l~~~~~~---------~~~~~~~~~~~~~~~~ 381 (491)
T 4gc0_A 311 TDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYT---------QAPGIVALLSMLFYVA 381 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHT---------TCCHHHHHHHHHHHHH
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHhhcCcchhccchHHHHHHHHHHHHHHhc---------ccchHHHHHHHHHHHH
Confidence 8788888888899999999999999999999999998888888777766554321 1223444555566666
Q ss_pred HhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc------c-hhhHHHHHHHHHHHHHHHhh
Q 010375 399 AFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSF------K-FGIFLFFAGWVTIMTIFVYF 471 (512)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~------g-~~~~~~~~~~~~~~~~~~~~ 471 (512)
+++.++.++.+.+.+|++|++.|+++.|+.+..+++++++++.+.+.+.+.. + ...++++++++++..++.++
T Consensus 382 ~~~~~~~~~~~~~~~E~fPt~~R~~~~g~~~~~~~~~~~i~~~~~p~l~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~ 461 (491)
T 4gc0_A 382 AFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWK 461 (491)
T ss_dssp HHHTTTTHHHHHHHHHSSCTTTHHHHHHHHHHHHHHHHHHHHTHHHHHCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHh
Confidence 6777777888889999999999999999999999999999998887664432 2 23456677777788888889
Q ss_pred ccccCCCCCHHHHHHHHhccc
Q 010375 472 FLPETKGVPIEEMILLWRKHW 492 (512)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~ 492 (512)
++||||++++||+++..+++.
T Consensus 462 ~~PETkg~tLeei~~~f~~~~ 482 (491)
T 4gc0_A 462 FVPETKGKTLEELEALWEPET 482 (491)
T ss_dssp HCCCCTTCCHHHHGGGTC---
T ss_pred eecCCCCCCHHHHHHHhCCCC
Confidence 999999999999987765543
|
| >1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=313.35 Aligned_cols=398 Identities=13% Similarity=0.061 Sum_probs=287.8
Q ss_pred chHHHHHHHHHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHHhh
Q 010375 24 TPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVA 103 (512)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~ 103 (512)
+++++.....++++.+..+++...+++. +| .+ .+++ .+..+.|++.+.+.++..++++++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~-------------~~~~-~s~~~~g~~~~~~~~~~~~~~~~~ 82 (451)
T 1pw4_A 23 RRLRWQIFLGIFFGYAAYYLVRKNFALA--MP----YL-------------VEQG-FSRGDLGFALSGISIAYGFSKFIM 82 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSHHHH--HH----HT-------------TSST-TCSSCHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH--HH----HH-------------HHHh-ccHhHHHHHHHHHHHHHHHHHHhH
Confidence 3445666666777778888877665544 22 22 5556 799999999999999999999999
Q ss_pred hhhhhhhchhHHHHHHHHHHHHHHHHHHh----hchHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHH
Q 010375 104 SPVTRDYGRRASIICGGISFLLGAALNAA----AANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQL 179 (512)
Q Consensus 104 g~l~dr~Grr~~l~~~~~~~~~~~~~~~~----~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~ 179 (512)
|+++||+|||++++.+.++.+++.+++++ +++++.++++|+++|++.+...+...+++.|++|+++|++++++...
T Consensus 83 G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~ 162 (451)
T 1pw4_A 83 GSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNC 162 (451)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHHHHHHHHCHHHHSSSSHHHHHHHHHHHHHHHTHHHHHHHHHTTCTTTHHHHHHHHHHH
T ss_pred HHHHHhcCchHHHHHHHHHHHHHHHHHHhhhhccccHHHHHHHHHHHHHHhhhccchHHHHHHHHCCchhhhHHHHHHHH
Confidence 99999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcccCCCc-hhHHHHhhHHHHHHHHHHh-hccCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHH
Q 010375 180 ATTLGIFTANMINYGTQKLETWG-WRLSLGLAAAPALMMTVGG-ILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEY 257 (512)
Q Consensus 180 ~~~lG~~~~~~~~~~~~~~~~~~-Wr~~f~~~~~~~~~~~~~~-~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (512)
+..+|.+++|.++ ....+..+ ||+.|++.++++++..++. +++||+|++...+++.+. .+..++
T Consensus 163 ~~~~g~~~g~~~~--~~l~~~~g~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~- 228 (451)
T 1pw4_A 163 AHNVGGGIPPLLF--LLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEY-----------KNDYPD- 228 (451)
T ss_dssp HHHHHHTSHHHHH--HHHHHHTCCSTTCTHHHHHHHHHHHHHHHHHCCCSSTTTCCCSCTTT-----------CCC----
T ss_pred HHHHHHHHHHHHH--HHHHHHhccHHHHHHHHHHHHHHHHHHHHhhccCCHhhcCCCChhhh-----------cccccc-
Confidence 9999999999994 44335567 9999999998887765554 558888753211111000 000000
Q ss_pred HHHHHHHHhhcccCcc--cHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHh-cCCCCchhhHHHHHHHHHHH
Q 010375 258 QDMVDASELANSIKHP--FRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLA 334 (512)
Q Consensus 258 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~ 334 (512)
+.+++ ++++....+ .++.++++. ++...+..+...........+.|.++++ +|+++.+.+.......++.+
T Consensus 229 -~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 302 (451)
T 1pw4_A 229 -DYNEK-AEQELTAKQIFMQYVLPNKL----LWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGI 302 (451)
T ss_dssp ------------CCTHHHHHHTSSCHH----HHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHHHHHHHHHHHH
T ss_pred -cchhh-hhcccccccchHHHHHcCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 00000 000000111 223333222 3444444555555667778888988887 89999999999999999999
Q ss_pred HHHHHHHHHHhhc--CChhHHHHhhHHHH-HHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeee
Q 010375 335 SSTLISIATVDKL--GRRALLISGGIQMI-TCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTV 411 (512)
Q Consensus 335 ~~~~~~g~l~d~~--~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (512)
++.++.+++.||+ ++|+.+..+..+.. ++.+++... +....+.......+.+.+.+.. .+....+
T Consensus 303 ~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~ 370 (451)
T 1pw4_A 303 PGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMN-----------PAGNPTVDMICMIVIGFLIYGP-VMLIGLH 370 (451)
T ss_dssp HHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHTTSC-----------CTTCHHHHHHHHHHHHHHHTHH-HHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh-----------cccCHHHHHHHHHHHHHHHhch-HHHHHHH
Confidence 9999999999999 99988777665544 333222111 1112333444444444444433 3333577
Q ss_pred ecccCChhhhhhHHHHHHHHHHH-HHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhhcc
Q 010375 412 PSEIFPLETRSAGQSITVAVNLF-FTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFL 473 (512)
Q Consensus 412 ~~~~~p~~~~~~~~g~~~~~~~~-g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 473 (512)
..|.+|++.|+++.|+.+....+ |..++|.+.|.+.+..++...+.+.+++.+++.++.+..
T Consensus 371 ~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 433 (451)
T 1pw4_A 371 ALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVV 433 (451)
T ss_dssp HHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999 999999999999999887766666665555555554443
|
| >3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-37 Score=301.79 Aligned_cols=373 Identities=12% Similarity=0.123 Sum_probs=277.5
Q ss_pred HHHHHHHHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHHhhhhh
Q 010375 27 VIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPV 106 (512)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l 106 (512)
.+....++++..+..+++....++. +|.+.+++ |++..+.|++.+.+.++..++++++|++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-----------------g~s~~~~g~~~~~~~~~~~i~~~~~G~l 84 (438)
T 3o7q_A 24 YIIPFALLCSLFFLWAVANNLNDIL--LPQFQQAF-----------------TLTNFQAGLIQSAFYFGYFIIPIPAGIL 84 (438)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHS-----------------CCCSHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhHHHH--HHHHHHHc-----------------CCCHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 3344445566667777777776655 55555555 8999999999999999999999999999
Q ss_pred hhhhchhHHHHHHHHHHHHHHHHH---HhhchHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHH
Q 010375 107 TRDYGRRASIICGGISFLLGAALN---AAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTL 183 (512)
Q Consensus 107 ~dr~Grr~~l~~~~~~~~~~~~~~---~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~l 183 (512)
+||+|||++++.+.++.+++.+++ +++++++.++++|++.|++.+...+...+++.|++|+++|++++++.+.+.++
T Consensus 85 ~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 164 (438)
T 3o7q_A 85 MKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSF 164 (438)
T ss_dssp HHHSCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHHHHHHHHHHH
T ss_pred HHHhcchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHhhHHHhhhhHHHHHHHHcCchhHHHHHHHHHHHHHH
Confidence 999999999999999999999999 88999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccc-CCCc-------------------------hhHHHHhhHHHHHHHHHHhhc--cCCChhHHHHcC
Q 010375 184 GIFTANMINYGTQKL-ETWG-------------------------WRLSLGLAAAPALMMTVGGIL--LPETPNSLIERG 235 (512)
Q Consensus 184 G~~~~~~~~~~~~~~-~~~~-------------------------Wr~~f~~~~~~~~~~~~~~~~--~~e~p~~l~~~~ 235 (512)
|.++++.+ ..... ...+ ||+.|++.+++.++..++.++ .||+++.. +
T Consensus 165 g~~~g~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~---~ 239 (438)
T 3o7q_A 165 GAIIAVVF--GQSLILSNVPHQSQDVLDKMSPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDN---H 239 (438)
T ss_dssp HHHHHHHH--TTHHHHTSSCCCCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCTTTC---C
T ss_pred HHHHHHHH--HHHHHhcccccccccccccCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCcccccc---c
Confidence 99999999 44443 3333 999998877776665554443 46654210 0
Q ss_pred CHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHH-HHh
Q 010375 236 KKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVL-FQS 314 (512)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 314 (512)
+. +++++.+.+++++++++.. +...+..+...........+.|.+ .++
T Consensus 240 ~~---------------------------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (438)
T 3o7q_A 240 SD---------------------------AKQGSFSASLSRLARIRHW----RWAVLAQFCYVGAQTACWSYLIRYAVEE 288 (438)
T ss_dssp CC---------------------------SSTTSHHHHHHHHTTCSHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cc---------------------------ccccchhhhHHHHHhChHH----HHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 00 0001112234455555543 333333344444556677788888 777
Q ss_pred -cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHH
Q 010375 315 -MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVI 393 (512)
Q Consensus 315 -~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (512)
+|++..+++.......++.+++.++.+++.||++||+.+..+.++..++.+++... +.. ......
T Consensus 289 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~-~~~~~~ 354 (438)
T 3o7q_A 289 IPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFA-------------GGH-VGLIAL 354 (438)
T ss_dssp STTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHC-------------CHH-HHHHHH
T ss_pred cCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHc-------------CCc-HHHHHH
Confidence 59999999999999999999999999999999999999988877766665544432 111 223333
Q ss_pred HHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-hhhHHHHHHHHHHHHHHHhh
Q 010375 394 CLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK-FGIFLFFAGWVTIMTIFVYF 471 (512)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~ 471 (512)
.+.+.+.+.. .+..+.+..|.+|++ ++.+.++.. .+.+++.++|.+.|.+.+..+ +...+.+.+++.+...+..+
T Consensus 355 ~~~g~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 430 (438)
T 3o7q_A 355 TLCSAFMSIQ-YPTIFSLGIKNLGQD-TKYGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIFAR 430 (438)
T ss_dssp HHHHHHHTTH-HHHHHHHHHSSCGGG-HHHHHHHHH-HTTHHHHHHHHHHHHHHHHHTSSGGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHH-HHHHHHHHHhhcccc-ccchhhHHH-HHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 4445554433 345567777889876 888888877 677999999999999999988 76666665555544444333
|
| >4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-32 Score=268.39 Aligned_cols=392 Identities=15% Similarity=0.094 Sum_probs=253.2
Q ss_pred CCccccCcchhHHHHHHHHHHHHHHHHhhhhhhhh-hchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhc
Q 010375 75 NNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRD-YGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFG 153 (512)
Q Consensus 75 ~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 153 (512)
++|+|++..+.+++.+.+.++..++++++|+++|| +|||+++..+.++.+++.+++++++|++.++++|+++|++.+..
T Consensus 46 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 125 (491)
T 4aps_A 46 TGDLHITRATAASIMAIYASMVYLSGTIGGFVADRIIGARPAVFWGGVLIMLGHIVLALPFGASALFGSIILIIIGTGFL 125 (491)
T ss_dssp HTSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHSCCSTTHHHHHHHHHHHHHHHH
T ss_pred hhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhc
Confidence 45679999999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred cchhhhhhhhcCCCCC--chhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhcc-CC----
Q 010375 154 NQAVPLYLSEMAPTHL--RGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILL-PE---- 226 (512)
Q Consensus 154 ~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~-~e---- 226 (512)
.+...++++|++|+++ |++++++++.+.++|..++|.+ .....+..+||+.|++.++..++..+..++. |+
T Consensus 126 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~--~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 203 (491)
T 4aps_A 126 KPNVSTLVGTLYDEHDRRRDAGFSIFVFGINLGAFIAPLI--VGAAQEAAGYHVAFSLAAIGMFIGLLVYYFGGKKTLDP 203 (491)
T ss_dssp HHHHHHHHHHHSSSCTTHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHTTCCS
T ss_pred cchHHHHHHHHcCcccccceeeehHHHHHHHHHHHHHHHH--HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhCcccccc
Confidence 9999999999999988 6778888999999999999999 4555556789999999877776665554332 21
Q ss_pred ChhHHHHcCCHHHHHHHHHH----------------HcCCchhhHHHHHHHH---------HHHhhcccCcccHHHhccc
Q 010375 227 TPNSLIERGKKVEGRRVLEK----------------IRGTKEVNAEYQDMVD---------ASELANSIKHPFRNILERR 281 (512)
Q Consensus 227 ~p~~l~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~ 281 (512)
..+...++.+.++.++..+. ..+..+.+........ .....++.+.+.. .+++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 281 (491)
T 4aps_A 204 HYLRPTDPLAPEEVKPLLVKVSLAVAGFIAIIVVMNLVGWNSLPAYINLLTIVAIAIPVFYFAWMISSVKVTST--EHLR 281 (491)
T ss_dssp CCSCCSCCCSHHHHHHHHHHCCCCCHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHHHC--------------
T ss_pred cccCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHhccCcccccchhhhhHHHHHHHHHHHHHHhhcccccHH--HHHH
Confidence 10000111223333332221 1111111110000000 0000000000000 0111
Q ss_pred chhHHHHHHHHHHHHHhhchhHHHhhHHHHHHh-cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHH-----H
Q 010375 282 NRPQLVMAIFMPMFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLI-----S 355 (512)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~-----~ 355 (512)
... .....+..+.....+.....+.|.+.++ .+.+....+.......+..+++.++.+++.||++||+... .
T Consensus 282 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~r~~~~~~~~~~ 359 (491)
T 4aps_A 282 VVS--YIPLFIAAVLFWAIEEQGSVVLATFAAERVDSSWFPVSWFQSLNPLFIMLYTPFFAWLWTAWKKNQPSSPTKFAV 359 (491)
T ss_dssp CTT--HHHHHHHHHHHHHHHGGGGTHHHHHHHHSCCCSSSCSGGGTTHHHHHHHHHHHHHHHHHHHTTTC---CHHHHHH
T ss_pred HHH--HHHHHHHHHHHHHHHhhccHHHHHHHHHHhccCccCHHHHhccchHHHHHHHHHHHHHHHHHhccCCCchHHHHH
Confidence 111 1222222222233334455566767666 6777677788888889999999999999999999986554 5
Q ss_pred hhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHH
Q 010375 356 GGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFF 435 (512)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g 435 (512)
+..+..+++.++........ . ......+.......+.+.+.+.. .+..+.++.|.+|++.|+++.|+.+....+|
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~l~g~~~~~~-~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g 434 (491)
T 4aps_A 360 GLMFAGLSFLLMAIPGALYG-T---SGKVSPLWLVGSWALVILGEMLI-SPVGLSVTTKLAPKAFNSQMMSMWFLSSSVG 434 (491)
T ss_dssp HHHHHHHHHTTTHHHHHHCC-C---CTTCCTHHHHHHHHHHHHHHHTT-TTHHHHHHHHHTTTTCSSSSTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcC-C---CCCccHHHHHHHHHHHHHHHHHH-hHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 55555555544444321110 0 01112334444455555555433 4445678899999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhhccccCC
Q 010375 436 TFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLPETK 477 (512)
Q Consensus 436 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (512)
..+++.+.+.+.+......+...++++.+..++.++..++.+
T Consensus 435 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (491)
T 4aps_A 435 SALNAQLVTLYNAKSEVAYFSYFGLGSVVLGIVLVFLSKRIQ 476 (491)
T ss_dssp HHHHHHHGGGGGGSSTTHHHHHTHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998876654444455555555555555555544433
|
| >2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-34 Score=276.81 Aligned_cols=360 Identities=13% Similarity=0.131 Sum_probs=266.7
Q ss_pred HHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhch
Q 010375 33 VAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGR 112 (512)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Gr 112 (512)
+++++.+..+++...+.+. +|.+.+ ++|.+..+.+++.+.+.++..++++++|+++||+||
T Consensus 4 ~~~~~~~~~~~~~~~~~~~--~~~~~~-----------------~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~ 64 (375)
T 2gfp_A 4 MLVLLVAVGQMAQTIYIPA--IADMAR-----------------DLNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVGR 64 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHH--HHHHHT-----------------TSSSTTHHHHHHHHHHHHHHHHHHTTHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHHhhh--hHHHHH-----------------HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3455566666777666554 444433 448999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHH
Q 010375 113 RASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMIN 192 (512)
Q Consensus 113 r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~ 192 (512)
|+++..+.++.+++.++++++++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..++|.+
T Consensus 65 r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~- 143 (375)
T 2gfp_A 65 RPVILVGMSIFMLATLVAVTTSSLTVLIAASAMQGMGTGVGGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLI- 143 (375)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCCSHHHHHHHHHHHHHHHHHHH-
T ss_pred chhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHhhhhhHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHH-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccCCCchhHHHHhhHHHHHHHHHH-hhccCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccC
Q 010375 193 YGTQKLETWGWRLSLGLAAAPALMMTVG-GILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIK 271 (512)
Q Consensus 193 ~~~~~~~~~~Wr~~f~~~~~~~~~~~~~-~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (512)
.....+..+||+.|++.++..++..+. .+++||++++. + ++++.+
T Consensus 144 -~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~------------------------------~~~~~~ 189 (375)
T 2gfp_A 144 -GGLLDTMWNWRACYLFLLVLCAGVTFSMARWMPETRPVD---A------------------------------PRTRLL 189 (375)
T ss_dssp -HHHSSCHHHHHHHHHHHHHHHHHHHCCCCCSSCCCSTTT---C------------------------------CCCCTT
T ss_pred -HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHCcccCCCC---c------------------------------ccccHH
Confidence 566666679999999988888777663 44578876310 0 001123
Q ss_pred cccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHh-cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCCh
Q 010375 272 HPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRR 350 (512)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r 350 (512)
.++++.++++. ++...+..+...........+.|.+.++ +|.++.+.+.......++.+++.++.+++.||.+++
T Consensus 190 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~ 265 (375)
T 2gfp_A 190 TSYKTLFGNSG----FNCYLLMLIGGLAGIAAFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTL 265 (375)
T ss_dssp TCSTHHHHHHH----HHHHHHHHHHHHHHHHHHHHHCSCSSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHTTTTHHHHH
T ss_pred HHHHHHhcCcc----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555444 2333333333444455666677777666 788888999999999999999999999999998773
Q ss_pred hHHHHhhHH-HHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHH
Q 010375 351 ALLISGGIQ-MITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITV 429 (512)
Q Consensus 351 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~ 429 (512)
...+... ...+...+..... ..+..+.......+.+.+.+.. .+....+..|..| ++|+++.|+.+
T Consensus 266 --~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~g~~~~~~-~~~~~~~~~~~~p-~~~g~~~g~~~ 332 (375)
T 2gfp_A 266 --MWQSVICCLLAGLLMWIPDWF---------GVMNVWTLLVPAALFFFGAGML-FPLATSGAMEPFP-FLAGTAGALVG 332 (375)
T ss_dssp --HHHHHHHHHHTSSSSSHHHHH---------HHHHHHHHHHHHHHHHHHHHHT-SSTTHHHHHTHHH-HHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHHHhhh---------ccccHHHHHHHHHHHHHHHHHh-hHHHHHHHHHhCC-cccchHHHHHH
Confidence 2222222 2222211111110 0112333444555555555544 3444677889998 89999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHH
Q 010375 430 AVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVT 463 (512)
Q Consensus 430 ~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 463 (512)
....+|..++|.+.+.+.+..++...+.+.++..
T Consensus 333 ~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~ 366 (375)
T 2gfp_A 333 GLQNIGSGVLASLSAMLPQTGQGSLGLLMTLMGL 366 (375)
T ss_dssp HHHHHHHHCCSTTCTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHH
Confidence 9999999999999999988777766665544433
|
| >2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.8e-28 Score=244.37 Aligned_cols=142 Identities=15% Similarity=0.205 Sum_probs=129.3
Q ss_pred cCcchhHHHHHHHHHHHHHHHHhhhhhhhhh-chhHHHHHHHHHHHHHHHHHHhhc-hHHHHHHHHHHHhhhhhhccchh
Q 010375 80 YDNQGLAAFTSSLYLAGLVASFVASPVTRDY-GRRASIICGGISFLLGAALNAAAA-NLAMLLTGRILLGVGIGFGNQAV 157 (512)
Q Consensus 80 ~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~~~~~~ 157 (512)
++..+.+++.+.+.++..++++++|+++||+ |||+++..+.++.+++.+++++++ +++.+++.|++.|++.+...+..
T Consensus 51 ~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 130 (524)
T 2xut_A 51 LRGAVAKDVFHSFVIGVYFFPLLGGWIADRFFGKYNTILWLSLIYCVGHAFLAIFEHSVQGFYTGLFLIALGSGGIKPLV 130 (524)
T ss_dssp TTTTTHHHHHHHHHHHHHHTHHHHHHHHTTSSCSHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHTTHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhccccchhH
Confidence 8999999999999999999999999999999 999999999999999999999999 99999999999999999999999
Q ss_pred hhhhhhcCCCCCchhHHHH---HHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhc
Q 010375 158 PLYLSEMAPTHLRGGLNMM---FQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGIL 223 (512)
Q Consensus 158 ~~~i~~~~~~~~r~~~~~~---~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~ 223 (512)
.+++.|++|+++|+++.+. ...+.++|.+++|.+ .....+..+||+.|++.++..++..+..++
T Consensus 131 ~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~g~~~--~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 197 (524)
T 2xut_A 131 SSFMGDQFDQSNKSLAQKAFDMFYFTINFGSFFASLS--MPLLLKNFGAAVAFGIPGVLMFVATVFFWL 197 (524)
T ss_dssp HHHHHHTCSTTTTTHHHHHHHHHHHHHHHHHHHHHHT--STHHHHTSCHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHcCccchHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhccccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999876666 889999999999998 555556679999999988887766655544
|
| >2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-27 Score=230.66 Aligned_cols=356 Identities=12% Similarity=0.049 Sum_probs=215.6
Q ss_pred ccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHH---HHHHhhchH-HHHHHHHHHHhhhhhh
Q 010375 77 YCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGA---ALNAAAANL-AMLLTGRILLGVGIGF 152 (512)
Q Consensus 77 ~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~---~~~~~~~~~-~~l~~~r~l~G~~~~~ 152 (512)
++|++..+.|++.+.+.++..++++++|+++||+|||++++.+..+++++. ..+.+++.. ..++..+++.|++.+.
T Consensus 37 ~~g~s~~~~g~~~~~~~~~~~i~~~~~G~lsDr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 116 (417)
T 2cfq_A 37 INHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGF 116 (417)
T ss_dssp TTCCCTTTSHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHHHHHTTSCHHHHHHHTHHHHHHTTCCHHHHGGGSSTTH
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 348899999999999999999999999999999999999999888775532 222333222 1234566777766665
Q ss_pred ccchhhhhhhhcCCC--CCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhccCCChhH
Q 010375 153 GNQAVPLYLSEMAPT--HLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNS 230 (512)
Q Consensus 153 ~~~~~~~~i~~~~~~--~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~e~p~~ 230 (512)
..+.....+.++.++ ++|+...+.......+|..++|.++ ....+ .+||+.|++.++..++..+..++.+|+++.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~l~--~~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 193 (417)
T 2cfq_A 117 CFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIV--GIMFT-INNQFVFWLGSGCALILAVLLFFAKTDAPS 193 (417)
T ss_dssp HHHTTHHHHHHHHHHHHHHHTCCHHHHSSSTTTHHHHHHHHH--HHHHH-HCSHHHHTTTTTTTTTHHHHSCSSCCCCSC
T ss_pred HHhhhHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHHHHHH--HHHHH-hchhHHHHHHHHHHHHHHHHHHHcCccccc
Confidence 554444555555433 3456677777777888888998884 33323 479999998877765555555554443310
Q ss_pred HHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHH
Q 010375 231 LIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPV 310 (512)
Q Consensus 231 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (512)
+.+.++ ..+ .+.++....+++++++++..+. ..+..+.....+.....+.|.
T Consensus 194 ---~~~~~~----------~~~-----------~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 245 (417)
T 2cfq_A 194 ---SATVAN----------AVG-----------ANHSAFSLKLALELFRQPKLWF----LSLYVIGVSCTYDVFDQQFAN 245 (417)
T ss_dssp ---SSCSSS----------SSS-----------SCCCCCCHHHHHHHTTCHHHHH----HHHHHHHHHHHHHHHHHHHHH
T ss_pred ---cccccc----------ccc-----------cccccccHHHHHHHhcCCchhh----HHHHHHHHHHHHHHHHHHHHH
Confidence 000000 000 0000000011233444333222 222222222223334445666
Q ss_pred HHHh-cCC---CCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchh
Q 010375 311 LFQS-MGF---KGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFS 386 (512)
Q Consensus 311 ~~~~-~g~---~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (512)
++.+ ++. +....+.......++.+++.++.++++||++||+.+..+..+..++...+... +..
T Consensus 246 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~l~~~~~~~~~~~~~~~~~-------------~~~ 312 (417)
T 2cfq_A 246 FFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFA-------------TSA 312 (417)
T ss_dssp HHHHTSSSHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTC-------------CSH
T ss_pred HHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHh-------------ccH
Confidence 6554 331 23445677777778888999999999999999998887766655544333211 112
Q ss_pred hHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHH-HHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHH
Q 010375 387 ILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSIT-VAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIM 465 (512)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~-~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 465 (512)
+..+....+.+.+.... .+..+.+.+|.+|++.|+++.+.. +....+|++++|.+.|.+.+..++...+.+.+++.++
T Consensus 313 ~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~lg~~~gp~l~G~l~~~~g~~~~f~~~~~~~l~ 391 (417)
T 2cfq_A 313 LEVVILKTLHMFEVPFL-LVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALG 391 (417)
T ss_dssp HHHHHHTTHHHHHHHHH-HHHHHHHHHHHSCHHHHHHHHHHHHTTTHHHHHHHHTHHHHTHHHHSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCHHHHHHHHHHHHHHHHhHHHHHhhhhHHHHHHhcCcHHHHHHHHHHHHH
Confidence 22333333333333222 222356888999999999999994 7888899999999999999988866655555554444
Q ss_pred HHHH-hhccccCC
Q 010375 466 TIFV-YFFLPETK 477 (512)
Q Consensus 466 ~~~~-~~~~~~~~ 477 (512)
+.+. +...+|++
T Consensus 392 ~~~~~~~~~~~~~ 404 (417)
T 2cfq_A 392 FTLISVFTLSGPG 404 (417)
T ss_dssp HHHHHTTSSCCSC
T ss_pred HHHHHHhhhcCCC
Confidence 4443 34444433
|
| >3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=1e-12 Score=128.09 Aligned_cols=154 Identities=10% Similarity=-0.021 Sum_probs=120.1
Q ss_pred HHHHHHHHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHH
Q 010375 287 VMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVI 366 (512)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~ 366 (512)
+....+..+.............|.+.+++|.+..+.++..+...++..++.++.|+++||+|||+.+..+.++..++.++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~ 107 (438)
T 3o7q_A 28 FALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAAL 107 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 33444444444445566777788888889999999999999999999999999999999999999999999888888777
Q ss_pred HHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 010375 367 VSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTL 446 (512)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~ 446 (512)
...... .++.+..++..++.+.+.+... +....++.|.+|+++|+.+.++.+....+|..++|.+.+.+
T Consensus 108 ~~~~~~----------~~~~~~l~~~~~l~G~~~~~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 176 (438)
T 3o7q_A 108 FWPAAE----------IMNYTLFLVGLFIIAAGLGCLE-TAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSL 176 (438)
T ss_dssp HHHHHH----------TTCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHHHHHHTTHH
T ss_pred HHhccc----------cccHHHHHHHHHHHHhhHHHhh-hhHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 633211 1224445555566666666443 34467889999999999999999999999999999999998
Q ss_pred H-hhcc
Q 010375 447 L-CSFK 451 (512)
Q Consensus 447 ~-~~~g 451 (512)
. +..+
T Consensus 177 ~~~~~~ 182 (438)
T 3o7q_A 177 ILSNVP 182 (438)
T ss_dssp HHTSSC
T ss_pred Hhcccc
Confidence 8 4443
|
| >1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 | Back alignment and structure |
|---|
Probab=99.38 E-value=4.4e-12 Score=124.01 Aligned_cols=147 Identities=14% Similarity=0.117 Sum_probs=126.8
Q ss_pred CccccCcchhHHHHHHHHHHHHHHHHhhhhhhhhh--chhHHHHHHHHHHH-HHHHHHHhh--chHHHHHHHHHHHhhhh
Q 010375 76 NYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDY--GRRASIICGGISFL-LGAALNAAA--ANLAMLLTGRILLGVGI 150 (512)
Q Consensus 76 ~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~--Grr~~l~~~~~~~~-~~~~~~~~~--~~~~~l~~~r~l~G~~~ 150 (512)
+.+|.+..+.+++.+...++..++.++.|++.||+ |||+.+..+..+.. ++.++..+. .+.+.+.+..++.|++.
T Consensus 281 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 360 (451)
T 1pw4_A 281 EVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLI 360 (451)
T ss_dssp TBSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHTTSCCTTCHHHHHHHHHHHHHHH
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHH
Confidence 33588999999999999999999999999999999 99999888877776 666666666 36778888889999998
Q ss_pred hhccchhhhhhhhcCCCCCchhHHHHHHHHHHH-HHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhcc
Q 010375 151 GFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTL-GIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILL 224 (512)
Q Consensus 151 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~l-G~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~ 224 (512)
+...+....++.|.+|+++|++++++......+ |..++|.+ .+...+..+|+..|++.++..++..++.+++
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~--~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 433 (451)
T 1pw4_A 361 YGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAI--VGYTVDFFGWDGGFMVMIGGSILAVILLIVV 433 (451)
T ss_dssp THHHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHSSCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred hchHHHHHHHHHHHhchhhhhhHHHHHHHHHHHHHHHHHHHH--HHHHHHhcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 888888899999999999999999999999999 99999999 5566666789999999888887776666554
|
| >2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=1.4e-12 Score=126.07 Aligned_cols=146 Identities=12% Similarity=0.125 Sum_probs=121.9
Q ss_pred CcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhhhh
Q 010375 81 DNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLY 160 (512)
Q Consensus 81 s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 160 (512)
+....+++.+...++..++.++.|+++||+|||+++..+.++.+++.++.++.++.+.+++..++.+++.+...+....+
T Consensus 257 ~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 336 (417)
T 2cfq_A 257 GTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCFKY 336 (417)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45567888888889999999999999999999999999998888888888888888888888888888877777777889
Q ss_pred hhhcCCCCCchhHHHH-HHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhc-cCCCh
Q 010375 161 LSEMAPTHLRGGLNMM-FQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGIL-LPETP 228 (512)
Q Consensus 161 i~~~~~~~~r~~~~~~-~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~-~~e~p 228 (512)
+.|.+|++.|+++.++ ++....+|..++|.+ .+...+..+++..|.+.++++++..++.++ .||.+
T Consensus 337 ~~~~~p~~~~g~~~g~~~~~~~~lg~~~gp~l--~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~~~~~ 404 (417)
T 2cfq_A 337 ITSQFEVRFSATIYLVCFCFFKQLAMIFMSVL--AGNMYESIGFQGAYLVLGLVALGFTLISVFTLSGPG 404 (417)
T ss_dssp HHHHSCHHHHHHHHHHHHTTTHHHHHHHHTHH--HHTHHHHSHHHHHHHHHHHHHHHHHHHHTTSSCCSC
T ss_pred HHHHCCHHHHHHHHHHHHHHHHhHHHHHhhhh--HHHHHHhcCcHHHHHHHHHHHHHHHHHHHhhhcCCC
Confidence 9999999999999998 477888999999999 455555668889999888888777666544 56654
|
| >4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} | Back alignment and structure |
|---|
Probab=99.33 E-value=3.4e-12 Score=126.34 Aligned_cols=168 Identities=15% Similarity=0.161 Sum_probs=123.4
Q ss_pred HHHHHHHHhhchhHHHhhHHHHHH-h-----cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhh-cCChhHHHHhhHHHHH
Q 010375 290 IFMPMFQILTGINSILFYAPVLFQ-S-----MGFKGDASLYSSAMTGAVLASSTLISIATVDK-LGRRALLISGGIQMIT 362 (512)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~-~-----~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~r~~~~~~~~~~~~ 362 (512)
.....+.....++....+.+.+++ . +|.+..+.++..+...++..++.++.|+++|| +|||+.+..+.++..+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~g~r~~~~~~~~~~~~ 97 (491)
T 4aps_A 18 LFMTEMWERFSYYGMRAILLYYMWFLISTGDLHITRATAASIMAIYASMVYLSGTIGGFVADRIIGARPAVFWGGVLIML 97 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHH
Confidence 333444444445555555555554 4 89999999999999999999999999999999 8999999998887777
Q ss_pred HHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhh--hhhHHHHHHHHHHHHHHHHH
Q 010375 363 CQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLET--RSAGQSITVAVNLFFTFVIA 440 (512)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~g~~~~~~~~g~~~~~ 440 (512)
+.++.... ++.+..++..++.+.+.+.. .+....++.|.+|+++ |+.+.++.+....+|..++|
T Consensus 98 ~~~~~~~~-------------~~~~~~~~~~~l~g~~~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 163 (491)
T 4aps_A 98 GHIVLALP-------------FGASALFGSIILIIIGTGFL-KPNVSTLVGTLYDEHDRRRDAGFSIFVFGINLGAFIAP 163 (491)
T ss_dssp HHHHHHSC-------------CSTTHHHHHHHHHHHHHHHH-HHHHHHHHHHHSSSCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHh-------------hhHHHHHHHHHHHHHHHHhc-cchHHHHHHHHcCcccccceeeehHHHHHHHHHHHHHH
Confidence 76655432 22344455555556555543 3444678889999988 77888889999999999999
Q ss_pred HHHHHHHhhcchhhHHHHHHHHHHHHHHHhh
Q 010375 441 QIFLTLLCSFKFGIFLFFAGWVTIMTIFVYF 471 (512)
Q Consensus 441 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 471 (512)
.+.+.+.+..++...+...++..+.+.+...
T Consensus 164 ~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~ 194 (491)
T 4aps_A 164 LIVGAAQEAAGYHVAFSLAAIGMFIGLLVYY 194 (491)
T ss_dssp HHHHHHHHHSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988887766666555554444433
|
| >2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.31 E-value=4.9e-12 Score=120.47 Aligned_cols=171 Identities=12% Similarity=0.097 Sum_probs=127.9
Q ss_pred HHHHHhhchhHHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHh
Q 010375 293 PMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILG 372 (512)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~ 372 (512)
..+.............|.+.+++|.++.+.++..+...++..++.++.|+++||+|||+.+..+..+..++..+.....
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~- 86 (375)
T 2gfp_A 8 LVAVGQMAQTIYIPAIADMARDLNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVAVTTS- 86 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSSSTTHHHHHHHHHHHHHHHHHHTTHHHHHTTSCCCCCCHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHhhhhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhc-
Confidence 3333444455566667878888999999999999999999999999999999999999999998888888777666542
Q ss_pred hccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcch
Q 010375 373 LKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKF 452 (512)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~g~ 452 (512)
+.+..+....+.+.+.+. ..+....++.|.+|+++|+++.+..+....+|..++|.+.+.+.+..++
T Consensus 87 ------------~~~~l~~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 153 (375)
T 2gfp_A 87 ------------SLTVLIAASAMQGMGTGV-GGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMWNW 153 (375)
T ss_dssp ------------HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHTSSCCSHHHHHHHHHHHHHHHHHHHHHHSSCHHHH
T ss_pred ------------cHHHHHHHHHHHHHHHHh-hhhhHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccH
Confidence 233444444455555443 3344467888999999999999999999999999999999998887777
Q ss_pred hhHHHHHHHHHHHHHH-HhhccccCC
Q 010375 453 GIFLFFAGWVTIMTIF-VYFFLPETK 477 (512)
Q Consensus 453 ~~~~~~~~~~~~~~~~-~~~~~~~~~ 477 (512)
...+.+.++..+...+ ..+..||++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (375)
T 2gfp_A 154 RACYLFLLVLCAGVTFSMARWMPETR 179 (375)
T ss_dssp HHHHHHHHHHHHHHHCCCCCSSCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHCcccC
Confidence 6666555544444443 444555543
|
| >2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=99.31 E-value=2.3e-11 Score=121.39 Aligned_cols=163 Identities=12% Similarity=0.053 Sum_probs=119.7
Q ss_pred HhhchhHHHhhHHHHHH-hcC------CCCchhhHHHHHHHHHHHHHHHHHHHHHhhc-CChhHHHHhhHHHHHHHHHHH
Q 010375 297 ILTGINSILFYAPVLFQ-SMG------FKGDASLYSSAMTGAVLASSTLISIATVDKL-GRRALLISGGIQMITCQVIVS 368 (512)
Q Consensus 297 ~~~~~~~~~~~~~~~~~-~~g------~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~r~~~~~~~~~~~~~~~~~~ 368 (512)
....++....+.+.++. ++| +++.+.++..+...++..++.++.|+++||+ |||+.+..+.++..++.++..
T Consensus 24 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~~g~r~~~~~~~~~~~~~~~~~~ 103 (524)
T 2xut_A 24 ERFSFYGMRNILTPFLMTALLLSIPEELRGAVAKDVFHSFVIGVYFFPLLGGWIADRFFGKYNTILWLSLIYCVGHAFLA 103 (524)
T ss_dssp HHHHHHHHHHHHHHHHHHSCSSCCSSSTTTTTHHHHHHHHHHHHHHTHHHHHHHHTTSSCSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 33344555566666654 488 9999999999999999999999999999999 999999988887777766655
Q ss_pred HHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHH---HHHHHHHHHHHHHHHHHH
Q 010375 369 IILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSI---TVAVNLFFTFVIAQIFLT 445 (512)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~---~~~~~~~g~~~~~~~~~~ 445 (512)
... ...+..+...++.+.+.+.. .+...+++.|.+|+++|+++.+. .+....+|..++|.+.+.
T Consensus 104 ~~~------------~~~~~~~~~~~l~g~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~g~~~~~~ 170 (524)
T 2xut_A 104 IFE------------HSVQGFYTGLFLIALGSGGI-KPLVSSFMGDQFDQSNKSLAQKAFDMFYFTINFGSFFASLSMPL 170 (524)
T ss_dssp HTS------------SCHHHHHHHHHHHHHHHHTT-HHHHHHHHHHTCSTTTTTHHHHHHHHHHHHHHHHHHHHHHTSTH
T ss_pred Hhc------------ccHHHHHHHHHHHHHhcccc-chhHHHHHHHHcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 421 12344445555555555533 34446788999999999776666 888899999999999999
Q ss_pred HHhhcchhhHHHHHHHHHHHHHHHhhc
Q 010375 446 LLCSFKFGIFLFFAGWVTIMTIFVYFF 472 (512)
Q Consensus 446 ~~~~~g~~~~~~~~~~~~~~~~~~~~~ 472 (512)
+.+..++...+.+.++..+...+....
T Consensus 171 l~~~~g~~~~f~~~~~~~~~~~~~~~~ 197 (524)
T 2xut_A 171 LLKNFGAAVAFGIPGVLMFVATVFFWL 197 (524)
T ss_dssp HHHTSCHHHHHHHHHHHHHHHHHHHHS
T ss_pred HhccccHHHHHHHHHHHHHHHHHHHHH
Confidence 998888776666655555544444433
|
| >4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=6.6e-10 Score=109.79 Aligned_cols=150 Identities=15% Similarity=0.091 Sum_probs=104.7
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhh-----chHHHHHHHHHHHhhhhhhc
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAA-----ANLAMLLTGRILLGVGIGFG 153 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~l~G~~~~~~ 153 (512)
+.+............+...++.++.+++.||+|||+.++.+.....++.+..+.. ++...++..-+..+......
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dr~Grr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (491)
T 4gc0_A 308 GASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSW 387 (491)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTT
T ss_pred CCCccchhhHHHHHHHHHHHHHHHHHHHHHhhcCcchhccchHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhHH
Confidence 4456666667777788889999999999999999999999888888777765543 12222222222222222234
Q ss_pred cchhhhhhhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhc----ccCCCchhHHHHhhHHHHHHHHHHh-hccCCCh
Q 010375 154 NQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQ----KLETWGWRLSLGLAAAPALMMTVGG-ILLPETP 228 (512)
Q Consensus 154 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~----~~~~~~Wr~~f~~~~~~~~~~~~~~-~~~~e~p 228 (512)
.+....+.+|.+|.+.|++++++......+|..+++.+..... .....++.+.|++.++++++..+.. +++|||.
T Consensus 388 ~~~~~~~~~E~fPt~~R~~~~g~~~~~~~~~~~i~~~~~p~l~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~PETk 467 (491)
T 4gc0_A 388 GPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETK 467 (491)
T ss_dssp THHHHHHHHHSSCTTTHHHHHHHHHHHHHHHHHHHHTHHHHHCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHCCCCT
T ss_pred HHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHheecCCC
Confidence 4667789999999999999999999998898888876621111 1112345667888888887776655 5589985
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 512 | ||||
| d1pw4a_ | 447 | f.38.1.1 (A:) Glycerol-3-phosphate transporter {Es | 3e-12 | |
| d1pv7a_ | 417 | f.38.1.2 (A:) Lactose permease {Escherichia coli [ | 6e-05 |
| >d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Length = 447 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: MFS general substrate transporter superfamily: MFS general substrate transporter family: Glycerol-3-phosphate transporter domain: Glycerol-3-phosphate transporter species: Escherichia coli [TaxId: 562]
Score = 66.2 bits (160), Expect = 3e-12
Identities = 55/399 (13%), Positives = 110/399 (27%), Gaps = 30/399 (7%)
Query: 85 LAAFTSSLYLAGLVASFVASPVTRDYGRR----ASIICGGISFLLGAALNAAAANLAMLL 140
L S + +A + F+ V+ R A +I L + A +++A++
Sbjct: 61 LGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMF 120
Query: 141 TGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLET 200
L G G G + RGG+ ++ A +G ++
Sbjct: 121 VLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFN 180
Query: 201 WGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDM 260
A L+ ++ +TP S + + E + +
Sbjct: 181 DWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQI 240
Query: 261 VDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGD 320
L N L +F L + + L + F D
Sbjct: 241 FMQYVLPN---------------KLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALD 285
Query: 321 ASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQE 380
S ++ + TL+ DK+ R +G M + +
Sbjct: 286 KSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYW--------- 336
Query: 381 LSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIA 440
++ + + V ++ + + + L E+ P + T V A
Sbjct: 337 MNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAA 396
Query: 441 QIFLTLLCSF--KFGIFLFFAGWVTIMTIFVYFFLPETK 477
+ F G F+ G + I + + K
Sbjct: 397 SAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEK 435
|
| >d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Length = 417 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: MFS general substrate transporter superfamily: MFS general substrate transporter family: LacY-like proton/sugar symporter domain: Lactose permease species: Escherichia coli [TaxId: 562]
Score = 42.8 bits (99), Expect = 6e-05
Identities = 34/406 (8%), Positives = 90/406 (22%), Gaps = 47/406 (11%)
Query: 85 LAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNA----AAANLAMLL 140
+++ L L+ + ++ G R ++ L+ A +L
Sbjct: 45 TGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNIL 104
Query: 141 TGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLET 200
G I+ G+ +GF A + R + + A +
Sbjct: 105 VGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFTI 164
Query: 201 WGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDM 260
+ + ++ + + P+S
Sbjct: 165 NNQFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVGANHSAFSL-------------- 210
Query: 261 VDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGD 320
+ + + G++ F +
Sbjct: 211 -------------------KLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFF 251
Query: 321 ASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQE 380
A+ + + + A++ + GG + + +
Sbjct: 252 ATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVR-------II 304
Query: 381 LSKSFSILVVVVICLFVLAFGWS-WGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVI 439
S + + VVI + F + + F + + + +
Sbjct: 305 GSSFATSALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIF 364
Query: 440 AQIFLTLLCSFK--FGIFLFFAGWVTIMTIFVYFFLPETKGVPIEE 483
+ + G +L T+ F L + +
Sbjct: 365 MSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLSGPGPLSLLR 410
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 512 | |||
| d1pw4a_ | 447 | Glycerol-3-phosphate transporter {Escherichia coli | 100.0 | |
| d1pv7a_ | 417 | Lactose permease {Escherichia coli [TaxId: 562]} | 99.95 | |
| d1pw4a_ | 447 | Glycerol-3-phosphate transporter {Escherichia coli | 99.44 | |
| d1pv7a_ | 417 | Lactose permease {Escherichia coli [TaxId: 562]} | 99.42 |
| >d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: MFS general substrate transporter superfamily: MFS general substrate transporter family: Glycerol-3-phosphate transporter domain: Glycerol-3-phosphate transporter species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.5e-38 Score=308.60 Aligned_cols=402 Identities=13% Similarity=0.013 Sum_probs=273.2
Q ss_pred CchHHHHHHHHHHHHhhhhhhhccccccccccHHHHHHhhhhhhhhhcccccCCccccCcchhHHHHHHHHHHHHHHHHh
Q 010375 23 VTPSVIVACFVAAIGGSIFGYDIGISGGVTSMDAFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFV 102 (512)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~ 102 (512)
.++++|.+...++++.+..+++...++.+ .|. -+|+|+|.++.|++.+++.+++.+++++
T Consensus 19 ~~~~~w~i~~~~~~~~~~~~~~~~~~~~~--~p~------------------~~~~g~s~~~~g~~~s~~~~~~~~~~~~ 78 (447)
T d1pw4a_ 19 YRRLRWQIFLGIFFGYAAYYLVRKNFALA--MPY------------------LVEQGFSRGDLGFALSGISIAYGFSKFI 78 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSHHHH--HHH------------------TTSSTTCSSCHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHH--HHH------------------HHHhCcCHHHHHHHHHHHHHHHHHHHHH
Confidence 34556777777777778877777665544 221 1234899999999999999999999999
Q ss_pred hhhhhhhhchhHHHHHHHHHHHHHHHHHHhh----chHHHHHHHHHHHhhhhhhccchhhhhhhhcCCCCCchhHHHHHH
Q 010375 103 ASPVTRDYGRRASIICGGISFLLGAALNAAA----ANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQ 178 (512)
Q Consensus 103 ~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~ 178 (512)
+|+++||+|||+++..+.++.+++.++++++ ++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+
T Consensus 79 ~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~ 158 (447)
T d1pw4a_ 79 MGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWN 158 (447)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCHHHHSSSSHHHHHHHHHHHHHHHTHHHHHHHHHTTCTTTHHHHHHHHHH
T ss_pred HHHHHHHcCchHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhhcccccccccc
Confidence 9999999999999999999999999998876 477899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhc-cCCChhHHHHcCCHHHHHHHHHHHcCCchhhHHH
Q 010375 179 LATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGIL-LPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEY 257 (512)
Q Consensus 179 ~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~-~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (512)
.+..+|.++++.++.... ....+||+.|++.+++.++..++.++ .+|+|+........+. +.+.+.
T Consensus 159 ~~~~~g~~i~~~~~~~~~-~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~ 225 (447)
T d1pw4a_ 159 CAHNVGGGIPPLLFLLGM-AWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEY------------KNDYPD 225 (447)
T ss_dssp HHHHHHHTSHHHHHHHHH-HHTCCSTTCTHHHHHHHHHHHHHHHHHCCCSSTTTCCCSCTTT------------CCC---
T ss_pred cccchhhhhhhhhhhhHh-hhhhcccccchhhhhhHHHHHHHHHHhcccchhhcccchhhhh------------hhhccc
Confidence 999999999998743222 22347999999988888776665544 6666532111110000 000000
Q ss_pred HHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHHHHHh-cCCCCchhhHHHHHHHHHHHHH
Q 010375 258 QDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASS 336 (512)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~ 336 (512)
+..++..++....+...+..++ .+.++......++..........+.|.++++ .+++..+.+.......+..+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (447)
T d1pw4a_ 226 DYNEKAEQELTAKQIFMQYVLP----NKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPG 301 (447)
T ss_dssp ----------CCTHHHHHHTSS----CHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHHHHHHHHHHHHHH
T ss_pred chhhccccccchhhHHHHHHHc----CchHHHHHHHhhhhhhhhhcchhhhhhhcccccccccchhhhhhhcchhhhhhh
Confidence 0000000001111111222222 2224444444444445556677777877765 8899999999999999999999
Q ss_pred HHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchhhHHHHHHHHHHHHhhhcccceeeeeecccC
Q 010375 337 TLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIF 416 (512)
Q Consensus 337 ~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (512)
.++.+++.||++|++..........+........... .....+......++.+++.. ...+....+..|.+
T Consensus 302 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~ 372 (447)
T d1pw4a_ 302 TLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMN--------PAGNPTVDMICMIVIGFLIY-GPVMLIGLHALELA 372 (447)
T ss_dssp HHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHTTSC--------CTTCHHHHHHHHHHHHHHHT-HHHHHHHHHHHHTS
T ss_pred hhhhhhhhhhccccccccccchhHHHHHHHHHHHHhc--------ccccHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHc
Confidence 9999999999998765544443333322222221110 11223333444444444333 22344457778999
Q ss_pred ChhhhhhHHHHHHHHHHHH-HHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHh
Q 010375 417 PLETRSAGQSITVAVNLFF-TFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVY 470 (512)
Q Consensus 417 p~~~~~~~~g~~~~~~~~g-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 470 (512)
|++.|+++.|+.+..++++ ..++|.+.|.+.|..|+...+.+...+.+.+.++.
T Consensus 373 p~~~~g~~~g~~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 427 (447)
T d1pw4a_ 373 PKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILL 427 (447)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988875 56688999999999987665555444444444333
|
| >d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: MFS general substrate transporter superfamily: MFS general substrate transporter family: LacY-like proton/sugar symporter domain: Lactose permease species: Escherichia coli [TaxId: 562]
Probab=99.95 E-value=3.6e-28 Score=233.22 Aligned_cols=358 Identities=11% Similarity=0.027 Sum_probs=224.8
Q ss_pred cccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHH----HHHHHHHHhhhhhhc
Q 010375 78 CKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAM----LLTGRILLGVGIGFG 153 (512)
Q Consensus 78 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~----l~~~r~l~G~~~~~~ 153 (512)
+|+|.+++|++.+++.++..++++++|+++||+|||++++.+..+..++..+..+..+... .++.+.+.+.+.+..
T Consensus 38 ~g~s~~~~g~i~s~~~l~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (417)
T d1pv7a_ 38 NHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFC 117 (417)
T ss_dssp HCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCTHHHHHHHHHHHTHHHHHHHTHHHHHHTTCHHHHHHTTTTGGGG
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhccccc
Confidence 3889999999999999999999999999999999999999999999999988888766544 345556666655555
Q ss_pred cchhhhhhhhcCCC--CCchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHH-HHHHhhccCCChhH
Q 010375 154 NQAVPLYLSEMAPT--HLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALM-MTVGGILLPETPNS 230 (512)
Q Consensus 154 ~~~~~~~i~~~~~~--~~r~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~-~~~~~~~~~e~p~~ 230 (512)
.........+..++ +++.+..+........|..+++.++ ....+. +|+..+........+ ..+..+..+|+|+.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (417)
T d1pv7a_ 118 FNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIV--GIMFTI-NNQFVFWLGSGCALILAVLLFFAKTDAPSS 194 (417)
T ss_dssp GTTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHH--HHHHHH-CHHHHHHHHHHHHHHHHHHHHSSCCCSCSS
T ss_pred ccchhhcccccccchhhhhHHHHHHHhhhhccccccccccc--cccccc-cccccccchhhHHHHHHHHHHHHhcccccc
Confidence 55554444444332 2445567777778888888888884 333222 456666555554444 44445556766531
Q ss_pred HHHcCCHHHHHHHHHHHcCCchhhHHHHHHHHHHHhhcccCcccHHHhcccchhHHHHHHHHHHHHHhhchhHHHhhHHH
Q 010375 231 LIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPV 310 (512)
Q Consensus 231 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (512)
. .+.++ ++...++.......+..+.+..+............. .......+.
T Consensus 195 ~---~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 245 (417)
T d1pv7a_ 195 A---TVANA----------------------VGANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTY----DVFDQQFAN 245 (417)
T ss_dssp S---CSSHH----------------------HHSCCCCCCHHHHHHHTTSSHHHHHHHHHHHHHHHH----HHHHHHHHH
T ss_pred h---hhhhh----------------------hhhhcccccccccccccccccccchhhhhHHHHHHH----Hhhhccccc
Confidence 1 00000 000000000111122222222222222222222211 122222222
Q ss_pred HHHh----cCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccccchh
Q 010375 311 LFQS----MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFS 386 (512)
Q Consensus 311 ~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (512)
+... .+.+....+.......++..++..+.+++.||.++|+.+..+..+..++.+.+... ++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~ 312 (417)
T d1pv7a_ 246 FFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFA-------------TSA 312 (417)
T ss_dssp HHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTC-------------CCH
T ss_pred cccccccccccchhhhcccccccccccccchhhhhhhhcccccccchhhhHHHHHHhhhccccc-------------ccc
Confidence 2222 22234455667777888889999999999999999999988877777666555432 224
Q ss_pred hHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHhhcchhhHHHH-HHHHHH
Q 010375 387 ILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITV-AVNLFFTFVIAQIFLTLLCSFKFGIFLFF-AGWVTI 464 (512)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~-~~~~~g~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~ 464 (512)
+..+....+.+.+.+... +....+..|.+|++.|+++.++.. ....+|..++|.+.|.+.|..|+...+.+ +++..+
T Consensus 313 ~~~~~~~~l~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~G~l~~~~g~~~~~~~~~~~~~~ 391 (417)
T d1pv7a_ 313 LEVVILKTLHMFEVPFLL-VGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALG 391 (417)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHHHHHHHHSCGGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHH-HHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 445555555566655444 344678889999999999999865 55679999999999999999997655444 444555
Q ss_pred HHHHHhhccccCCCCCH
Q 010375 465 MTIFVYFFLPETKGVPI 481 (512)
Q Consensus 465 ~~~~~~~~~~~~~~~~~ 481 (512)
..++..+.++++++.+.
T Consensus 392 ~~~~~~~~l~~~~~~~~ 408 (417)
T d1pv7a_ 392 FTLISVFTLSGPGPLSL 408 (417)
T ss_dssp HHHHHHHHSCCSSCTTH
T ss_pred HHHHHHHhhcCCCccch
Confidence 55555566666555544
|
| >d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: MFS general substrate transporter superfamily: MFS general substrate transporter family: Glycerol-3-phosphate transporter domain: Glycerol-3-phosphate transporter species: Escherichia coli [TaxId: 562]
Probab=99.44 E-value=2.1e-13 Score=130.76 Aligned_cols=163 Identities=15% Similarity=0.161 Sum_probs=117.7
Q ss_pred HHHhhHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHhhHHHHHHHHHHHHHHhhccCCCcccc
Q 010375 303 SILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELS 382 (512)
Q Consensus 303 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (512)
.+....|.+ ++.|++..+.++..+...++..++.++.|+++||+|||+.+..+.++..++.++.......
T Consensus 43 ~~~~~~p~~-~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~--------- 112 (447)
T d1pw4a_ 43 NFALAMPYL-VEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWA--------- 112 (447)
T ss_dssp SHHHHHHHT-TSSTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCHHH---------
T ss_pred HHHHHHHHH-HHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHhhccccchh---------
Confidence 344555644 5689999999999999999999999999999999999999999988887777766553211
Q ss_pred cchhhHHHHHHHHHHHHhhhcccceeeeeecccCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc-chhh-HHHHHH
Q 010375 383 KSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSF-KFGI-FLFFAG 460 (512)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~-g~~~-~~~~~~ 460 (512)
....+..++...+.+.+.+... +....++.|.+|+++|++++++.+....+|..+++.+.+...+.. ++.. ++....
T Consensus 113 ~~~~~~~~~~~~~~g~~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~w~~~~~~~~~ 191 (447)
T d1pw4a_ 113 TSSIAVMFVLLFLCGWFQGMGW-PPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAF 191 (447)
T ss_dssp HSSSSHHHHHHHHHHHHHHHTH-HHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHHHHH
T ss_pred hhhHHHHHHHHHHHHHhhhhhh-hHHHHHHHHHHHhhcccccccccccccchhhhhhhhhhhhHhhhhhcccccchhhhh
Confidence 1123344444555555555443 333577889999999999999999999999999999888877655 3443 333444
Q ss_pred HHHHHHHHHhhccccC
Q 010375 461 WVTIMTIFVYFFLPET 476 (512)
Q Consensus 461 ~~~~~~~~~~~~~~~~ 476 (512)
+..+..++.+...++.
T Consensus 192 ~~~~~~~~~~~~~~~~ 207 (447)
T d1pw4a_ 192 CAILVALFAFAMMRDT 207 (447)
T ss_dssp HHHHHHHHHHHHCCCS
T ss_pred hHHHHHHHHHHhcccc
Confidence 4445555555555543
|
| >d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: MFS general substrate transporter superfamily: MFS general substrate transporter family: LacY-like proton/sugar symporter domain: Lactose permease species: Escherichia coli [TaxId: 562]
Probab=99.42 E-value=3.5e-13 Score=127.45 Aligned_cols=146 Identities=12% Similarity=0.110 Sum_probs=129.1
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccchhh
Q 010375 79 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVP 158 (512)
Q Consensus 79 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 158 (512)
+.+....+...+...++..++..+.+++.||+|||+.+..+.++.+++.++..+.++.+.+++..++.|++.+...+...
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 334 (417)
T d1pv7a_ 255 EQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCF 334 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhcccccccccccccchhhhhhhhcccccccchhhhHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHHHH
Confidence 45677788889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCCCchhHHHHH-HHHHHHHHHHHHHHHHhhcccCCCchhHHHHhhHHHHHHHHHHhhc-cCC
Q 010375 159 LYLSEMAPTHLRGGLNMMF-QLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGIL-LPE 226 (512)
Q Consensus 159 ~~i~~~~~~~~r~~~~~~~-~~~~~lG~~~~~~~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~-~~e 226 (512)
+++.|.+|+++|+++.++. +....+|..++|.+ .+...+..||+..|++.+++.++..++..+ +++
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~--~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~ 402 (417)
T d1pv7a_ 335 KYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVL--AGNMYESIGFQGAYLVLGLVALGFTLISVFTLSG 402 (417)
T ss_dssp HHHHHHSCGGGHHHHHHHHHTTTHHHHHHHHHHH--HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 9999999999999999975 55678999999998 566667779999999988888776666554 443
|