Citrus Sinensis ID: 010380

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510--
MTPATLTKPHISLQTLHYYCFKDQQRGPCLRPASYRSGLGAYKRRYGLHMQPCRSFKTDDKGENEAESELKLKKTSGFWSSLKDVIFRVNGPGSQSSDEYCKAVAKVEKVFSSIAIQIGRCIVTMMSTGVVLAVGFQLSGGDSQMNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSSTGSNTFPGT
ccccccccEEEcccccccHHcccccccccccccccccccccccccccEEEEEcccccccccccccHHHHHHHHccccccHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHccEEEEEEEccEEEEEEEECccccccccHHHHHHHHHHHHHHHHHcccccccccccccccEEEECccccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEcccccHHHHHHHHHHHHHHcccccEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEECccccccccccccccHHHHHHHHHHcccHHHHHHHHccccccccccccEEEEcccHHHHHHHHHHHHHcccEEEcccccccccHHHHHHHHHHHHHccccHHHHHHHcccccHHHHHHHHHHHHHHHccccccccccc
****TLTKPHISLQTLHYYCFKDQQRGPCLRPASYRSGLGAYKRRYGLHMQP*****************************LKDVIF**N*******DEYCKAVAKVEKVFSSIAIQIGRCIVTMMSTGVVLAVGFQLSGGDSQMNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSST********
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHxxxxxxxxxx
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MTPATLTKPHISLQTLHYYCFKDQQRGPCLRPASYRSGLGAYKRRYGLHMQPCRSFKTDDKGENEAESELKLKKTSGFWSSLKDVIFRVNGPGSQSSDEYCKAVAKVEKVFSSIAIQIGRCIVTMMSTGVVLAVGFQLSGGDSQMNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSSTGSNTFPGT

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Probable chlorophyll(ide) b reductase NYC1, chloroplastic Required for proper chloroplast degradation. Involved in chlorophyll b degradation.confidentQ5N800
Probable chlorophyll(ide) b reductase NYC1, chloroplastic Involved in chlorophyll b degradation.probableQ93ZA0

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2ET6, chain A
Confidence level:very confident
Coverage over the Query: 173-223,241-383,412-447
View the alignment between query and template
View the model in PyMOL
Template: 1GZ6, chain A
Confidence level:very confident
Coverage over the Query: 172-223,241-387,403-470
View the alignment between query and template
View the model in PyMOL
Template: 2O2S, chain A
Confidence level:confident
Coverage over the Query: 173-447
View the alignment between query and template
View the model in PyMOL