Citrus Sinensis ID: 010428
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 511 | 2.2.26 [Sep-21-2011] | |||||||
| Q43866 | 584 | Beta-fructofuranosidase, | yes | no | 0.919 | 0.804 | 0.703 | 0.0 | |
| Q43089 | 555 | Beta-fructofuranosidase, | N/A | no | 0.935 | 0.861 | 0.671 | 0.0 | |
| Q67XZ3 | 594 | Beta-fructofuranosidase, | no | no | 0.962 | 0.828 | 0.594 | 1e-178 | |
| Q9LIB9 | 572 | Beta-fructofuranosidase, | no | no | 0.931 | 0.832 | 0.620 | 1e-175 | |
| Q70XE6 | 606 | Fructan 6-exohydrolase OS | N/A | no | 0.921 | 0.777 | 0.608 | 1e-174 | |
| P26792 | 592 | Beta-fructofuranosidase, | N/A | no | 0.900 | 0.777 | 0.622 | 1e-171 | |
| Q0JDC6 | 586 | Beta-fructofuranosidase, | yes | no | 0.931 | 0.812 | 0.591 | 1e-166 | |
| Q01IS8 | 586 | Beta-fructofuranosidase, | N/A | no | 0.931 | 0.812 | 0.591 | 1e-166 | |
| Q39693 | 583 | Beta-fructofuranosidase, | N/A | no | 0.919 | 0.806 | 0.584 | 1e-163 | |
| Q39692 | 592 | Beta-fructofuranosidase, | N/A | no | 0.933 | 0.805 | 0.583 | 1e-162 |
| >sp|Q43866|INV1_ARATH Beta-fructofuranosidase, insoluble isoenzyme CWINV1 OS=Arabidopsis thaliana GN=CWINV1 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/479 (70%), Positives = 395/479 (82%), Gaps = 9/479 (1%)
Query: 16 LGHGVVELQASHHVYRNL-QTSQSTSP--NQPYRTGYHFQPPKNWINDPNGVMIYKGIYH 72
+G+ VV L+ASHHVY+ L Q++ + SP NQPYRTG+HFQPPKNW+NDPNG MIYKGIYH
Sbjct: 19 IGNYVVNLEASHHVYKRLTQSTNTKSPSVNQPYRTGFHFQPPKNWMNDPNGPMIYKGIYH 78
Query: 73 LFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPA 132
LFYQ+NPKGAVWGNIVWAHSTS DLINW PH PAI+PS DINGCWSGSATILP KP
Sbjct: 79 LFYQWNPKGAVWGNIVWAHSTSTDLINWDPHPPAIFPSAPFDINGCWSGSATILPNGKPV 138
Query: 133 IFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWL 192
I YTGIDP N+QVQN+A PKNLSDPYLREW KSP NPLMAPDA+N IN SSFRDPTTAWL
Sbjct: 139 ILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWL 198
Query: 193 GPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGL 252
G DK+WRVIIGSKI+R+GLAI Y SKDF+ W K+ PLH G+GMWECPDFFPV+ +G
Sbjct: 199 GQDKKWRVIIGSKIHRRGLAITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGS 258
Query: 253 NGLDTSDMG-PNT--KHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDY 309
NG++TS G PN KHVLK+SLDDTKH+YYT+GTY KD++VPD G + R+DY
Sbjct: 259 NGVETSSFGEPNEILKHVLKISLDDTKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDY 318
Query: 310 GKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSGKHLVQWP 369
GKYYASKTFFD AKNRR+LWGW NESSSV DDV+KGW+GIQ IPRK+WLD+SGK L+QWP
Sbjct: 319 GKYYASKTFFDSAKNRRILWGWTNESSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWP 378
Query: 370 VVEIEKLRVNQVQ-VPSKLLKGGSVIEVTGVTAAQADVEISFDVSDFKKAEKLDPGWTNP 428
V E+E+LR QV+ + +K+LK GS +EV GVTAAQADVE+ F V D +KA+ ++P WT+P
Sbjct: 379 VREVERLRTKQVKNLRNKVLKSGSRLEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDP 438
Query: 429 QLLCSQKGASVKGALGPFGLLALASKDLKEYTAVFFRIFKGED--NKFVVLMCSDQSRS 485
QL+CS+ SVK LGPFGL+ LASK+L+EYT+V+FRIFK NK+VVLMCSDQSRS
Sbjct: 439 QLICSKMNVSVKSGLGPFGLMVLASKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRS 497
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Beta-fructofuranosidase that can use sucrose and 1-kestose, and, to a lower extent, neokestose and levan, as substrates, but not inuline. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 6 |
| >sp|Q43089|INV1_PEA Beta-fructofuranosidase, cell wall isozyme OS=Pisum sativum GN=BFRUCT1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 647 bits (1669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/487 (67%), Positives = 384/487 (78%), Gaps = 9/487 (1%)
Query: 6 LSLFLFFALFLGHGVVELQASHHVYRNLQT----SQSTSPNQPYRTGYHFQPPKNWINDP 61
+S +LF V+ ++A+HHVY+ L+T S S +QPYRT YHFQP KNWINDP
Sbjct: 3 ISSIFLLSLFSLIYVIPIEATHHVYQTLETLSSHHSSKSNHQPYRTAYHFQPLKNWINDP 62
Query: 62 NGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSG 121
NG M Y G YHLFYQYNPKGAVWGNIVWAHS SKDL+NW P D AI+PSQ SDI GCWSG
Sbjct: 63 NGPMRYGGFYHLFYQYNPKGAVWGNIVWAHSVSKDLVNWTPLDHAIHPSQPSDIKGCWSG 122
Query: 122 SATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINT 181
SATILPG KPAI YTGIDP+N QVQN+A+PKN+SDP LREW KSPKNPLM P N+IN+
Sbjct: 123 SATILPGGKPAILYTGIDPNNHQVQNIAIPKNMSDPLLREWKKSPKNPLMEPTIANKINS 182
Query: 182 SSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWEC 241
SSFRDPTT+WLG D WRV+IGSKI+ KG+AILY+SK+FV W++AKHPLHS +GTGMWEC
Sbjct: 183 SSFRDPTTSWLGKDGFWRVLIGSKIDTKGMAILYKSKNFVDWVEAKHPLHSAEGTGMWEC 242
Query: 242 PDFFPVSTYGL--NGLDTSDMG-PNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGS 298
PDF+PV L G+DTS G + +HVLKVSLDDTKH++Y +G+Y KD +VP+ G
Sbjct: 243 PDFYPVLDKNLLRTGVDTSRNGDDDVRHVLKVSLDDTKHDHYLIGSYDVVKDVFVPENGF 302
Query: 299 VESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWL 358
++ LR+DYGKYYASKTFFD KNRR+L GWVNESSSV DDVKKGW+GI IPR++WL
Sbjct: 303 EDNGFVLRYDYGKYYASKTFFDDGKNRRILLGWVNESSSVADDVKKGWSGIHTIPREIWL 362
Query: 359 DKSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQADVEISFDVSDFKKA 418
+SGK LVQWPV EIE LR+N V P+K++KGG I +TGV + QADVEISF++SD K
Sbjct: 363 HESGKQLVQWPVKEIENLRMNPVNWPTKVIKGGERISITGVDSVQADVEISFEISDLGKV 422
Query: 419 EKLDPGWTNPQLLCSQKGASVKGALGPFGLLALASKDLKEYTAVFFRIFKGEDNKFVVLM 478
E L W +PQLLCSQKGA VKG +GPFGLL AS+ LKEYTAVFFRIFK +D K +VLM
Sbjct: 423 ESLRK-WIDPQLLCSQKGAGVKGGVGPFGLLVFASQGLKEYTAVFFRIFKYQD-KNLVLM 480
Query: 479 CSDQSRS 485
CSDQSRS
Sbjct: 481 CSDQSRS 487
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Pisum sativum (taxid: 3888) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q67XZ3|INV3_ARATH Beta-fructofuranosidase, insoluble isoenzyme CWINV3 OS=Arabidopsis thaliana GN=CWINV3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 624 bits (1610), Expect = e-178, Method: Compositional matrix adjust.
Identities = 308/518 (59%), Positives = 373/518 (72%), Gaps = 26/518 (5%)
Query: 6 LSLFLFFALFLGHGVVELQASHHVYRNLQTSQSTSPNQPYRTGYHFQPPKNWINDPNGVM 65
+ L L ++FL + + +L+AS H NQPYRTGYHFQP KNW+NDPNG M
Sbjct: 9 IGLSLLLSMFLANFITDLEASSH----------QDLNQPYRTGYHFQPLKNWMNDPNGPM 58
Query: 66 IYKGIYHLFYQYNPKGAVWG-NIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSAT 124
IYKGIYHLFYQYNP GAVW IVW HSTS DL+NWI PA PSQ SDINGCWSGS T
Sbjct: 59 IYKGIYHLFYQYNPYGAVWDVRIVWGHSTSVDLVNWISQPPAFNPSQPSDINGCWSGSVT 118
Query: 125 ILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSF 184
ILP KP I YTGID + QVQN+AVP N+SDPYLREW K P+NPLM +A+N IN F
Sbjct: 119 ILPNGKPVILYTGIDQNKGQVQNVAVPVNISDPYLREWSKPPQNPLMTTNAVNGINPDRF 178
Query: 185 RDPTTAWLGPDKRWRVIIGSKIN-RKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPD 243
RDPTTAWLG D WRVI+GS + R+GLAILY+S+DF +W ++ PLH TGMWECPD
Sbjct: 179 RDPTTAWLGRDGEWRVIVGSSTDDRRGLAILYKSRDFFNWTQSMKPLHYEDLTGMWECPD 238
Query: 244 FFPVSTYGLNGLDTSDMGPN-TKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESD 302
FFPVS G +G++TS +G N KHVLKVSL +T H+YYT+G+Y KD YVPD G V+++
Sbjct: 239 FFPVSITGSDGVETSSVGENGIKHVLKVSLIETLHDYYTIGSYDREKDVYVPDLGFVQNE 298
Query: 303 SGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSG 362
S R DYGKYYASKTF+D K RR+LWGWVNESS DD++KGW+G+Q+ PRK+WLD+SG
Sbjct: 299 SAPRLDYGKYYASKTFYDDVKKRRILWGWVNESSPAKDDIEKGWSGLQSFPRKIWLDESG 358
Query: 363 KHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQADVEISFDVSDFKKAEKLD 422
K L+QWP+ EIE LR QV K+LK GS ++V GVTAAQADVE+SF V + +KA+ ++
Sbjct: 359 KELLQWPIEEIETLRGQQVNWQKKVLKAGSTLQVHGVTAAQADVEVSFKVKELEKADVIE 418
Query: 423 PGWTNPQLLCSQKGASVKGALGPFGLLALASKDLKEYTAVFFRIFKGEDN-----KFVVL 477
P WT+PQ +CSQ SV LGPFGL+ LAS D++EYT+V+FRIFK D+ K+VVL
Sbjct: 419 PSWTDPQKICSQGDLSVMSGLGPFGLMVLASNDMEEYTSVYFRIFKSNDDTNKKTKYVVL 478
Query: 478 MCSDQSRS--------LQFFSFNISSISHPTSCFQTLF 507
MCSDQSRS F +F SH T +TL
Sbjct: 479 MCSDQSRSSLNDENDKSTFGAFVAIDPSHQTISLRTLI 516
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6-fructan exohydrolase that can use phlein, levan, neokestose, levanbiose, 6-kestose, and 1-kestose as substrates. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 EC: 0 |
| >sp|Q9LIB9|INV5_ARATH Beta-fructofuranosidase, insoluble isoenzyme CWINV5 OS=Arabidopsis thaliana GN=CWINV5 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 615 bits (1585), Expect = e-175, Method: Compositional matrix adjust.
Identities = 308/496 (62%), Positives = 371/496 (74%), Gaps = 20/496 (4%)
Query: 1 MANFY---LSLFLFFALFL-GHGVVELQASHHVYRNLQTSQSTSPNQPYRTGYHFQPPKN 56
MAN +++FL +LFL VV L A +V N++ NQPYRTGYHFQPPKN
Sbjct: 1 MANIVWCNIAMFLLVSLFLTDDAVVVLDALDNVPNNIK-------NQPYRTGYHFQPPKN 53
Query: 57 WINDPNGVMIYKGIYHLFYQYNPKGAVW--GNIVWAHSTSKDLINWIPHDPAIYPSQQSD 114
W+NDPNG MIYKGIYHLFYQ+N GAV VW H+TS DLINWI PAI PS+ SD
Sbjct: 54 WMNDPNGPMIYKGIYHLFYQWNQNGAVMDVNKTVWGHATSTDLINWITLSPAIRPSRPSD 113
Query: 115 INGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPD 174
INGCWSGS TILP KP I YTG D +NRQVQNL PKNL+DPYLR W KSP+NPL+ P
Sbjct: 114 INGCWSGSVTILPNGKPVILYTGNDRYNRQVQNLVKPKNLTDPYLRHWTKSPENPLVTPS 173
Query: 175 AMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVK 234
+N IN+S+FRDPTTAW G D RWR+ GS+ R+GLAIL+ SKDFV W ++ PLH
Sbjct: 174 PVNHINSSAFRDPTTAWFGRDGRWRITTGSQEGRRGLAILHTSKDFVIWKQSPKPLHYHD 233
Query: 235 GTGMWECPDFFPVSTYGLNGLDTS-DMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYV 293
GTGMWECPDFFPV+ GLDTS GP KHVLKVSL DT ++YYT+GTY +D YV
Sbjct: 234 GTGMWECPDFFPVARTDSRGLDTSFSSGPMVKHVLKVSLTDTFNDYYTIGTYDEVRDVYV 293
Query: 294 PDEGSVESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIP 353
PD+G V+ ++ R+DYGK+YASKTF+D RR+LWGWVNESS D++KKGWAG+QAIP
Sbjct: 294 PDKGFVQDETAPRYDYGKFYASKTFYDSVNQRRILWGWVNESSPEKDNIKKGWAGLQAIP 353
Query: 354 RKLWLDKSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQADVEISFDVS 413
RK+WLD+SGK LVQWPV EIE+LR QV+ +KLLKGGSV+EV GVTA QADVE+ F VS
Sbjct: 354 RKVWLDESGKRLVQWPVKEIERLRTTQVKWGNKLLKGGSVMEVHGVTAPQADVEVFFKVS 413
Query: 414 --DFKKAEKLDPGWTNPQLLCSQKGASVKGALGPFGLLALASKDLKEYTAVFFRIFKGED 471
D +KA+ ++PGWT+PQL+CSQ+ AS LGPFGL+ LASK+++EYT+V RIF+ +
Sbjct: 414 GFDLEKADVIEPGWTDPQLICSQRNAS--SGLGPFGLMVLASKNMEEYTSVNIRIFRAGE 471
Query: 472 N--KFVVLMCSDQSRS 485
N + VV+MCSDQS S
Sbjct: 472 NSKEHVVVMCSDQSTS 487
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q70XE6|6FEH_BETVU Fructan 6-exohydrolase OS=Beta vulgaris GN=6-FEH PE=1 SV=1 | Back alignment and function description |
|---|
Score = 612 bits (1579), Expect = e-174, Method: Compositional matrix adjust.
Identities = 294/483 (60%), Positives = 361/483 (74%), Gaps = 12/483 (2%)
Query: 14 LFLGHGVVELQASHHVYRN--------LQTSQSTSPNQPYRTGYHFQPPKNWINDPNGVM 65
+ L HG++ + ++ + + Q + + PYRT YHFQ PKNW+NDPNG M
Sbjct: 16 MLLSHGMIIIAKDQAIHHHDDDHDDMLINDHQMINDDDPYRTAYHFQSPKNWMNDPNGPM 75
Query: 66 IYKGIYHLFYQYNPKGAVW-GNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSAT 124
IYKGIYHLFYQY P VW IVW HSTS DLINW A+ PS+ DINGCWSGS T
Sbjct: 76 IYKGIYHLFYQYYPYDPVWHTEIVWGHSTSTDLINWTQQPIALSPSEPYDINGCWSGSIT 135
Query: 125 ILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMA--PDAMNQINTS 182
ILP KP I YTGI+ N QVQNLA+PKNLSDPYL+EW+K P+NPLMA P N IN S
Sbjct: 136 ILPQNKPVILYTGINNKNYQVQNLALPKNLSDPYLKEWIKLPQNPLMAGTPTNNNNINAS 195
Query: 183 SFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECP 242
SFRDP+TAW D +WRVI+G++ ++GLA+L+ S DFV W +PLHS +G G+WECP
Sbjct: 196 SFRDPSTAWQLSDGKWRVIVGTQQGKRGLAVLFTSDDFVKWNNTGNPLHSTEGNGIWECP 255
Query: 243 DFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESD 302
DFFPV G DTS +G + KHVLK+SL DT++EYYT+G Y KD YVPDEGS+ESD
Sbjct: 256 DFFPVYVGKSLGADTSIIGDDVKHVLKLSLFDTQYEYYTIGRYDIEKDIYVPDEGSIESD 315
Query: 303 SGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSG 362
GLR+DYGK+YASK+FFD NRR+LWGWVNESS DD+KKGW+G+QAIPR + LDKSG
Sbjct: 316 LGLRYDYGKFYASKSFFDDETNRRILWGWVNESSIQADDIKKGWSGVQAIPRTVVLDKSG 375
Query: 363 KHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQADVEISFDVSDFKKAEKLD 422
K LVQWP+ E++ LR N V++PS+++KGGS++E++ +TA+QADVEISF + + E+LD
Sbjct: 376 KQLVQWPLAEVDMLRENDVELPSQVIKGGSLVEISQITASQADVEISFKIPESNYVEELD 435
Query: 423 PGWTNPQLLCSQKGASVKGALGPFGLLALASKDLKEYTAVFFRIFKGEDNKFVVLMCSDQ 482
TNPQ+LCSQKGAS+KG GPFGLL LAS L+EYTAVFFRIFKG NK+VVLMCSDQ
Sbjct: 436 STCTNPQILCSQKGASIKGRFGPFGLLTLASMGLEEYTAVFFRIFKGP-NKYVVLMCSDQ 494
Query: 483 SRS 485
+RS
Sbjct: 495 TRS 497
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Hydrolyzes levan-type beta-(2->6)-linked fructans to fructose, but not inulin-type beta-(2->1)-linked fructans. Beta vulgaris (taxid: 161934) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 1 EC: 5 EC: 4 |
| >sp|P26792|INV1_DAUCA Beta-fructofuranosidase, insoluble isoenzyme 1 OS=Daucus carota GN=INV1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 601 bits (1550), Expect = e-171, Method: Compositional matrix adjust.
Identities = 292/469 (62%), Positives = 352/469 (75%), Gaps = 9/469 (1%)
Query: 23 LQASHHVYRNLQTSQSTSPNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGA 82
++A H ++ NLQ+ + + Q +RTGYHFQP +NWINDPNG M YKG+YHLFYQYNPKGA
Sbjct: 37 VEAFHEIHYNLQSVGAENVKQVHRTGYHFQPKQNWINDPNGPMYYKGVYHLFYQYNPKGA 96
Query: 83 VWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGI---D 139
VWGNIVWAHS S DLINW P +PAI+PS+ D GC SGSATILPG KP I YTGI
Sbjct: 97 VWGNIVWAHSVSTDLINWTPLEPAIFPSKPFDKYGCRSGSATILPGNKPVILYTGIVEGP 156
Query: 140 PHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWR 199
P N QVQN A+P NLSDPYLR+W+K NPL+ A N N ++FRDPTTAWL W+
Sbjct: 157 PKNVQVQNYAIPANLSDPYLRKWIKPDNNPLVV--ANNGENATAFRDPTTAWLDKSGHWK 214
Query: 200 VIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSD 259
+++GSK NR+G+A LYRSKDF+ W KAKHP+HS TGMWECPDFFPVS GLNGLDTS
Sbjct: 215 MLVGSKRNRRGIAYLYRSKDFIKWTKAKHPIHSQANTGMWECPDFFPVSLKGLNGLDTSV 274
Query: 260 MGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYASKTFF 319
G + KHVLKVSLD T++EYYTVGTY T KDRY+PD SV+ +GLR+DYG +YASKTFF
Sbjct: 275 TGESVKHVLKVSLDLTRYEYYTVGTYLTDKDRYIPDNTSVDGWAGLRYDYGNFYASKTFF 334
Query: 320 DGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLRVN 379
D +KNRR+LWGW NES S DV KGWAGIQ IPR LWLD SGK L+QWP+ E+E LR +
Sbjct: 335 DPSKNRRILWGWANESDSTAHDVAKGWAGIQLIPRTLWLDPSGKQLMQWPIEELETLRGS 394
Query: 380 QVQVPSKL-LKGGSVIEVTGVTAAQADVEISFDVSDFKKAEKLDPGWT--NPQLLCSQKG 436
+V+ K L G ++EV G+TAAQADVE++F K E DP W + + +CS KG
Sbjct: 395 KVKFSRKQDLSKGILVEVKGITAAQADVEVTFSFKSLAKREPFDPKWLEYDAEKICSLKG 454
Query: 437 ASVKGALGPFGLLALASKDLKEYTAVFFRIFKGEDNKFVVLMCSDQSRS 485
++V+G +GPFGLL LAS+ L+EYT VFFR+FK + N VLMCSD +RS
Sbjct: 455 STVQGGVGPFGLLTLASEKLEEYTPVFFRVFKAQ-NTHKVLMCSDATRS 502
|
May play an important role in phloem unloading and in stress response. Daucus carota (taxid: 4039) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q0JDC6|INV3_ORYSJ Beta-fructofuranosidase, insoluble isoenzyme 3 OS=Oryza sativa subsp. japonica GN=CIN3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 586 bits (1511), Expect = e-166, Method: Compositional matrix adjust.
Identities = 290/490 (59%), Positives = 354/490 (72%), Gaps = 14/490 (2%)
Query: 7 SLFLFFALFLGHGVVELQASHHVYRNLQTSQSTSPNQPYRTGYHFQPPKNWINDPNGVMI 66
+ +F AL VV ++ASH VY LQ+ ++ + RTGYHFQPPK+WINDPNG M
Sbjct: 8 AALVFVALLQMAAVVVVRASHVVYPELQSLEAKHVDGKLRTGYHFQPPKHWINDPNGPMY 67
Query: 67 YKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATIL 126
YKG+YHLFYQYNPKGAVWGNI WAHS S DLI+W +P IYPS+ D GCWSGSAT+L
Sbjct: 68 YKGLYHLFYQYNPKGAVWGNIEWAHSVSTDLIDWTALEPGIYPSKTFDEKGCWSGSATVL 127
Query: 127 PGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRD 186
P P I YTGIDP RQVQN+A P NLSDPYLREW K NP++ PD IN S+FRD
Sbjct: 128 PSGVPVIMYTGIDPDERQVQNVAYPVNLSDPYLREWYKPDYNPIINPDG--GINASAFRD 185
Query: 187 PTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFP 246
PTTAW GPD WR+++GSK+N KGLA+LYRS+DF W+KA HPLHS TGMWECPDFFP
Sbjct: 186 PTTAWYGPDGHWRLLVGSKVNMKGLAVLYRSRDFKKWVKAHHPLHSAH-TGMWECPDFFP 244
Query: 247 VSTYG-----LNGLDTSDM-----GPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDE 296
V+ G G+DT+++ K+VLKVSLD T++EYYTVG Y A DRYVPD
Sbjct: 245 VAVAGGSRHYRRGVDTAELHDAAVAEEVKYVLKVSLDLTRYEYYTVGWYDHATDRYVPDA 304
Query: 297 GSVESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKL 356
++D GLR+DYG +YASK+F+D AK RR++WGW NES +V DD +KGWAGIQAIPRKL
Sbjct: 305 AFPDNDYGLRYDYGDFYASKSFYDPAKRRRIVWGWANESDTVPDDRRKGWAGIQAIPRKL 364
Query: 357 WLDKSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQADVEISFDVSDFK 416
WL GK LVQWPV E++ LR V V K++K G+ EVTG + Q+DV+++F + D
Sbjct: 365 WLSADGKQLVQWPVEELKALRAKHVNVTDKVIKKGNYFEVTGFKSVQSDVDMAFAIKDLS 424
Query: 417 KAEKLDPGW-TNPQLLCSQKGASVKGALGPFGLLALASKDLKEYTAVFFRIFKGEDNKFV 475
KAE+ DP W T+ + LC + G+ V G +GPFGL ALAS DLKE TAVFFR+FK D+ V
Sbjct: 425 KAEEFDPAWRTDAEALCKKLGSDVDGGVGPFGLWALASGDLKERTAVFFRVFKANDSSHV 484
Query: 476 VLMCSDQSRS 485
VLMC+D +RS
Sbjct: 485 VLMCNDPTRS 494
|
Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q01IS8|INV3_ORYSI Beta-fructofuranosidase, insoluble isoenzyme 3 OS=Oryza sativa subsp. indica GN=CIN3 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 586 bits (1511), Expect = e-166, Method: Compositional matrix adjust.
Identities = 290/490 (59%), Positives = 354/490 (72%), Gaps = 14/490 (2%)
Query: 7 SLFLFFALFLGHGVVELQASHHVYRNLQTSQSTSPNQPYRTGYHFQPPKNWINDPNGVMI 66
+ +F AL VV ++ASH VY LQ+ ++ + RTGYHFQPPK+WINDPNG M
Sbjct: 8 AALVFVALLQMAAVVVVRASHVVYPELQSLEAKHVDGKLRTGYHFQPPKHWINDPNGPMY 67
Query: 67 YKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATIL 126
YKG+YHLFYQYNPKGAVWGNI WAHS S DLI+W +P IYPS+ D GCWSGSAT+L
Sbjct: 68 YKGLYHLFYQYNPKGAVWGNIEWAHSVSTDLIDWTALEPGIYPSKTFDEKGCWSGSATVL 127
Query: 127 PGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRD 186
P P I YTGIDP RQVQN+A P NLSDPYLREW K NP++ PD IN S+FRD
Sbjct: 128 PSGVPVIMYTGIDPDERQVQNVAYPVNLSDPYLREWYKPDYNPIINPDG--GINASAFRD 185
Query: 187 PTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFP 246
PTTAW GPD WR+++GSK+N KGLA+LYRS+DF W+KA HPLHS TGMWECPDFFP
Sbjct: 186 PTTAWYGPDGHWRLLVGSKVNMKGLAVLYRSRDFKKWVKAHHPLHSAH-TGMWECPDFFP 244
Query: 247 VSTYG-----LNGLDTSDM-----GPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDE 296
V+ G G+DT+++ K+VLKVSLD T++EYYTVG Y A DRYVPD
Sbjct: 245 VAVAGGSRHYRRGVDTAELHDAAVAEEVKYVLKVSLDLTRYEYYTVGWYDHATDRYVPDA 304
Query: 297 GSVESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKL 356
++D GLR+DYG +YASK+F+D AK RR++WGW NES +V DD +KGWAGIQAIPRKL
Sbjct: 305 AFPDNDYGLRYDYGDFYASKSFYDPAKRRRIVWGWANESDTVPDDRRKGWAGIQAIPRKL 364
Query: 357 WLDKSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQADVEISFDVSDFK 416
WL GK LVQWPV E++ LR V V K++K G+ EVTG + Q+DV+++F + D
Sbjct: 365 WLSADGKQLVQWPVEELKALRAKHVNVTDKVIKKGNYFEVTGFKSVQSDVDMAFAIKDLS 424
Query: 417 KAEKLDPGW-TNPQLLCSQKGASVKGALGPFGLLALASKDLKEYTAVFFRIFKGEDNKFV 475
KAE+ DP W T+ + LC + G+ V G +GPFGL ALAS DLKE TAVFFR+FK D+ V
Sbjct: 425 KAEEFDPAWRTDAEALCKKLGSDVDGGVGPFGLWALASGDLKERTAVFFRVFKANDSSHV 484
Query: 476 VLMCSDQSRS 485
VLMC+D +RS
Sbjct: 485 VLMCNDPTRS 494
|
Oryza sativa subsp. indica (taxid: 39946) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q39693|INV3_DAUCA Beta-fructofuranosidase, insoluble isoenzyme 3 OS=Daucus carota GN=INV3 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 576 bits (1484), Expect = e-163, Method: Compositional matrix adjust.
Identities = 281/481 (58%), Positives = 346/481 (71%), Gaps = 11/481 (2%)
Query: 10 LFFALFLGHGVVELQASHHVYRNLQTSQSTSPNQPYRTGYHFQPPKNWINDPNGVMIYKG 69
+F +FL V+ ++H V+ LQ+ + +RTGYHFQP K+WINDPNG M YKG
Sbjct: 20 IFSFIFLNINGVD--STHRVFPELQSISAVDVKLVHRTGYHFQPQKHWINDPNGPMFYKG 77
Query: 70 IYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGE 129
YHLFYQYNPKG+VWGNIVWAHS SKDLINWI +PAI+PS+ D GCWSGSATILPG
Sbjct: 78 YYHLFYQYNPKGSVWGNIVWAHSVSKDLINWIALEPAIFPSKPFDQYGCWSGSATILPGN 137
Query: 130 KPAIFYTGI---DPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRD 186
KP I YTGI DP N QVQN AVP N SDP+LREWVK NPL+ ++ N S+FRD
Sbjct: 138 KPVILYTGIVSPDPENAQVQNYAVPANYSDPFLREWVKPDNNPLVG---VHTENPSAFRD 194
Query: 187 PTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFP 246
PTTAW W++++GS +G+A LYRSKDF W ++ HP+H+ TGMWECPDF+P
Sbjct: 195 PTTAWFD-GGHWKMLVGSSRKHRGIAYLYRSKDFKKWKRSPHPIHTKAETGMWECPDFYP 253
Query: 247 VSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLR 306
VS +GLD S MG KHVLKVSL+ T++EYYT+G Y+ +D YVPD SV+ +GLR
Sbjct: 254 VSPRSEDGLDNSKMGRGIKHVLKVSLNSTRYEYYTIGRYNRVRDFYVPDNTSVDGWAGLR 313
Query: 307 FDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSGKHLV 366
+DYG +YASKTF+D K RR+LWGW NES S DDV+KGWAGIQ IPR++WLD SG+ LV
Sbjct: 314 YDYGNFYASKTFYDPIKKRRILWGWANESDSQIDDVQKGWAGIQLIPRRIWLDPSGRQLV 373
Query: 367 QWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQADVEISFDVSDFKKAEKLDPGWT 426
QWP+ E+E LR +++ + ++ L G +EVTG+TAAQADV+ +F KAE DP W
Sbjct: 374 QWPIEEVEGLRGSELHMRNQKLDMGVHVEVTGITAAQADVDATFSFKSLDKAESFDPEWI 433
Query: 427 N--PQLLCSQKGASVKGALGPFGLLALASKDLKEYTAVFFRIFKGEDNKFVVLMCSDQSR 484
N Q +C G++++G LGPFGLL LASKDL+EYT VFFRIFK ED K VLMCSD R
Sbjct: 434 NLDAQDVCDSMGSTIQGGLGPFGLLTLASKDLEEYTPVFFRIFKAEDQKLKVLMCSDAKR 493
Query: 485 S 485
S
Sbjct: 494 S 494
|
May play an important role in phloem unloading and in stress response. Daucus carota (taxid: 4039) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q39692|INV2_DAUCA Beta-fructofuranosidase, insoluble isoenzyme 2 OS=Daucus carota GN=INV2 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 571 bits (1472), Expect = e-162, Method: Compositional matrix adjust.
Identities = 286/490 (58%), Positives = 346/490 (70%), Gaps = 13/490 (2%)
Query: 4 FYLSLFLFFALF---LGHGVVELQASHHVYRNLQTSQSTSPNQPYRTGYHFQPPKNWIND 60
F+ LFL +F L + ++ASH V+ LQ+ + + +RTGYHFQP K+WIND
Sbjct: 16 FHSMLFLSAVVFIFSLDVNIRGVEASHQVFPELQSVSAVNVQLVHRTGYHFQPKKHWIND 75
Query: 61 PNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWS 120
PNG M YKG YHLFYQYNPKGAVWGNIVWAHS SKDLINW+ +PAI+PS+ D GCWS
Sbjct: 76 PNGPMYYKGFYHLFYQYNPKGAVWGNIVWAHSISKDLINWVALEPAIFPSKPFDKYGCWS 135
Query: 121 GSATILPGEKPAIFYTGI---DPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMN 177
GSAT+LPG KP I YTGI P N QVQN AVP N SDPYLREW+K NP++ + N
Sbjct: 136 GSATVLPGGKPVIMYTGIVTPSPVNTQVQNFAVPANYSDPYLREWIKPDNNPIVRARSEN 195
Query: 178 QINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTG 237
+SSFRDPTTAW W++++GS+ +G+A LYRS++F+ W KAKHPLHS TG
Sbjct: 196 ---SSSFRDPTTAWFD-GVHWKILVGSRRKHRGIAYLYRSRNFLKWTKAKHPLHSKDRTG 251
Query: 238 MWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEG 297
MWEC DF+PV+ G+NGLDTS G + KHVLKVSL T++EYYTVG Y D YVPD
Sbjct: 252 MWECLDFYPVAPKGMNGLDTSVTGQDIKHVLKVSLYSTRYEYYTVGEYDRDNDIYVPDNT 311
Query: 298 SVESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLW 357
SV+ +GLR+DYG +YASKTFFD K RR+LWGW NES S DDV+KGWAGIQ IPRKLW
Sbjct: 312 SVDGWAGLRYDYGNFYASKTFFDPDKQRRILWGWANESDSKQDDVQKGWAGIQLIPRKLW 371
Query: 358 LDKSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQADVEISFDVSDFKK 417
LD +GK L+QWP+ EI+ LR V + S++L G IEV GVTAAQADV+ +F +
Sbjct: 372 LDPNGKQLIQWPIEEIQLLRGQNVHMGSQVLNTGEHIEVKGVTAAQADVDATFSFKSLDR 431
Query: 418 AEKLDPGWTNPQLL--CSQKGASVKGALGPFGLLALASKDLKEYTAVFFRIFKGEDNKFV 475
AE DP W L C G++V+G LGPFG L LAS+ L+EYT VFFR+FK +D K
Sbjct: 432 AEWFDPNWAKLDALDVCDWMGSTVRGGLGPFGFLTLASEKLEEYTPVFFRVFKTKD-KLK 490
Query: 476 VLMCSDQSRS 485
VLMCSD RS
Sbjct: 491 VLMCSDAKRS 500
|
May play an important role in phloem unloading and in stress response. Daucus carota (taxid: 4039) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 511 | ||||||
| 408362889 | 577 | cell wall invertase [Malus x domestica] | 0.947 | 0.838 | 0.761 | 0.0 | |
| 385282634 | 577 | cell wall invertase 1 [Prunus persica] | 0.933 | 0.826 | 0.760 | 0.0 | |
| 4205115 | 577 | cell wall invertase precursor [Fragaria | 0.913 | 0.809 | 0.756 | 0.0 | |
| 375300670 | 576 | cell wall invertase [Manihot esculenta] | 0.915 | 0.812 | 0.762 | 0.0 | |
| 225442303 | 575 | PREDICTED: beta-fructofuranosidase, inso | 0.915 | 0.813 | 0.721 | 0.0 | |
| 356556769 | 575 | PREDICTED: beta-fructofuranosidase, cell | 0.935 | 0.831 | 0.712 | 0.0 | |
| 47078691 | 576 | cell wall apoplastic invertase [Vitis vi | 0.933 | 0.828 | 0.706 | 0.0 | |
| 449448102 | 585 | PREDICTED: beta-fructofuranosidase, inso | 0.935 | 0.817 | 0.705 | 0.0 | |
| 449523748 | 585 | PREDICTED: beta-fructofuranosidase, inso | 0.935 | 0.817 | 0.703 | 0.0 | |
| 297743094 | 574 | unnamed protein product [Vitis vinifera] | 0.909 | 0.810 | 0.712 | 0.0 |
| >gi|408362889|gb|AFU56876.1| cell wall invertase [Malus x domestica] | Back alignment and taxonomy information |
|---|
Score = 785 bits (2028), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/491 (76%), Positives = 421/491 (85%), Gaps = 7/491 (1%)
Query: 1 MANFYLSLFLFFALFLGHGVVELQASHHVYRNLQT-SQSTSPN-----QPYRTGYHFQPP 54
MA L L+ F L+LGH V+ L+ASHHVYR+LQT S+ TS + +PYRTGYHFQPP
Sbjct: 1 MAISSLFLYCFLCLWLGHAVLRLEASHHVYRSLQTYSELTSSHHHPDTEPYRTGYHFQPP 60
Query: 55 KNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSD 114
KNWINDPNG +IYKGIYHLFYQYNPKG VWGNIVWAHSTS DL+NW PHD AI+PSQ SD
Sbjct: 61 KNWINDPNGPLIYKGIYHLFYQYNPKGVVWGNIVWAHSTSTDLVNWTPHDAAIFPSQPSD 120
Query: 115 INGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPD 174
INGCWSGSATILP KP I YTGI+P N+QVQNLA PKNLSDP+LREWVK P+NPLMAP
Sbjct: 121 INGCWSGSATILPSGKPVILYTGINPQNQQVQNLAYPKNLSDPFLREWVKVPQNPLMAPT 180
Query: 175 AMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVK 234
N IN SSFRDPTTAWLGPDKRWRVIIGSK N++GLAILYRSKDF+ W+KAKHPLHS K
Sbjct: 181 QANHINASSFRDPTTAWLGPDKRWRVIIGSKQNQRGLAILYRSKDFLSWVKAKHPLHSAK 240
Query: 235 GTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVP 294
TGMWECPDFFPVS +G NGLD+S+ GP KHVLK SLD+TKHEYYT+GTY+ KD Y+P
Sbjct: 241 KTGMWECPDFFPVSIHGQNGLDSSENGPAVKHVLKASLDNTKHEYYTIGTYNIDKDIYIP 300
Query: 295 DEGSVESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPR 354
D+GSVESDSGLR+DYGK+YASKTFFD +KNRR+LWGW+NESSSV D+KKGW+G+QAIPR
Sbjct: 301 DKGSVESDSGLRYDYGKFYASKTFFDSSKNRRILWGWINESSSVEGDIKKGWSGLQAIPR 360
Query: 355 KLWLDKSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQADVEISFDVSD 414
LWL KSGK LVQWPV EIEKLR V++PS +LKGGSV EV GVTAAQADVEI+F +SD
Sbjct: 361 TLWLAKSGKQLVQWPVQEIEKLRGKTVKLPSTVLKGGSVREVVGVTAAQADVEITFGISD 420
Query: 415 FKKAEKLDPGWTNPQLLCSQKGASVKGALGPFGLLALASKDLKEYTAVFFRIFKGEDNKF 474
FKKAE LDP WT+PQLLC QK A+VKG+LGPFGL LASKDLKEYTAVF+RIFK +NK+
Sbjct: 421 FKKAEVLDPSWTDPQLLCGQKSATVKGSLGPFGLYVLASKDLKEYTAVFYRIFKA-NNKY 479
Query: 475 VVLMCSDQSRS 485
VVL+CSDQSRS
Sbjct: 480 VVLLCSDQSRS 490
|
Source: Malus x domestica Species: Malus x domestica Genus: Malus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|385282634|gb|AFI57904.1| cell wall invertase 1 [Prunus persica] | Back alignment and taxonomy information |
|---|
Score = 776 bits (2003), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/484 (76%), Positives = 414/484 (85%), Gaps = 7/484 (1%)
Query: 8 LFLFFALFLGHGVVELQASHHVYRNLQT-SQSTSP-----NQPYRTGYHFQPPKNWINDP 61
L+ F +L+LGH V +L+ASH VYRNL T SQ TS N+PYRTGYHFQPPKNWINDP
Sbjct: 8 LYCFLSLWLGHAVHQLEASHQVYRNLPTYSQLTSSHHHPVNEPYRTGYHFQPPKNWINDP 67
Query: 62 NGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSG 121
NG +IYKGIYH FYQYNP VWGNIVWAHSTS DL+NW PHD AIYPSQ SDINGCWSG
Sbjct: 68 NGPLIYKGIYHFFYQYNPLDVVWGNIVWAHSTSTDLVNWTPHDAAIYPSQPSDINGCWSG 127
Query: 122 SATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINT 181
SATILPG KP + YTGIDP NRQVQNLA PKNLSDP+LREW K P+NPLMAP NQIN
Sbjct: 128 SATILPGGKPVMLYTGIDPQNRQVQNLAYPKNLSDPFLREWAKIPQNPLMAPSQANQINA 187
Query: 182 SSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWEC 241
SSFRDPTTAWLGPDK+WRVIIG K N+ G AILYRSKDF++W+KAK PLHS + TGMWEC
Sbjct: 188 SSFRDPTTAWLGPDKKWRVIIGGKTNQTGEAILYRSKDFLNWVKAKQPLHSAEKTGMWEC 247
Query: 242 PDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVES 301
PDFFPVS + NGLDTS +GP+ KHV KVSLD+T+ EYYT+GTY+ KD Y+PD+GSVES
Sbjct: 248 PDFFPVSIHSQNGLDTSKIGPDVKHVFKVSLDNTRREYYTIGTYNIDKDIYIPDKGSVES 307
Query: 302 DSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKS 361
DSGLR+DYGK+YASKTFFD +KNRR+LWGW+NESS+V DD+KKGW+G+QAIPR LWLDKS
Sbjct: 308 DSGLRYDYGKFYASKTFFDSSKNRRILWGWINESSTVEDDIKKGWSGLQAIPRTLWLDKS 367
Query: 362 GKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQADVEISFDVSDFKKAEKL 421
GK LVQWPVVEIEKLR +V++PS +LKGGSV EV GVTAAQADVEI+F +SD KKAE L
Sbjct: 368 GKQLVQWPVVEIEKLREKEVKLPSSVLKGGSVHEVLGVTAAQADVEITFGISDLKKAEVL 427
Query: 422 DPGWTNPQLLCSQKGASVKGALGPFGLLALASKDLKEYTAVFFRIFKGEDNKFVVLMCSD 481
DP WTNPQLLCS+KGASVKG LGPFGLL LASK LKEYT+VF+RIFK + NK VVL+CSD
Sbjct: 428 DPSWTNPQLLCSRKGASVKGGLGPFGLLVLASKGLKEYTSVFYRIFK-DHNKHVVLLCSD 486
Query: 482 QSRS 485
QSRS
Sbjct: 487 QSRS 490
|
Source: Prunus persica Species: Prunus persica Genus: Prunus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|4205115|gb|AAD10960.1| cell wall invertase precursor [Fragaria x ananassa] | Back alignment and taxonomy information |
|---|
Score = 756 bits (1953), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/473 (75%), Positives = 405/473 (85%), Gaps = 6/473 (1%)
Query: 19 GVVELQASHHVYRNLQTSQ--STSPN--QPYRTGYHFQPPKNWINDPNGVMIYKGIYHLF 74
GV+ELQASHHVY NLQT+Q ST P PYRTGYHFQP KNWINDPNG +IYKGIYHLF
Sbjct: 18 GVIELQASHHVYSNLQTTQLASTHPQAKDPYRTGYHFQPRKNWINDPNGPLIYKGIYHLF 77
Query: 75 YQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIF 134
YQYNP VWGNIVWAHSTS DL+NWIPH+ AIYPS SDINGCWSGS TILP KPAI
Sbjct: 78 YQYNPSSVVWGNIVWAHSTSTDLVNWIPHEAAIYPSILSDINGCWSGSVTILPSGKPAIL 137
Query: 135 YTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGP 194
YTGI+P QVQNLA PKNLSDP+LREWVK P+NPLMAP NQIN SSFRDPTTAWLGP
Sbjct: 138 YTGINPDKEQVQNLAFPKNLSDPFLREWVKVPQNPLMAPTQANQINASSFRDPTTAWLGP 197
Query: 195 DKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNG 254
DKRWR+IIGSK N +GLAILYRSKDF+HW KAKHPL+S GMWECPDFFPVS L G
Sbjct: 198 DKRWRLIIGSKRNHRGLAILYRSKDFMHWTKAKHPLYSTPKNGMWECPDFFPVSKTKLLG 257
Query: 255 LDTSDMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYA 314
LDTS +GP+ KHVLKVSLD+T+ EYYT+GTY+ +KD Y+PD+GS+ESDSGLR+DYGK+YA
Sbjct: 258 LDTSAIGPDVKHVLKVSLDNTRKEYYTIGTYNVSKDIYIPDDGSIESDSGLRYDYGKFYA 317
Query: 315 SKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIE 374
SKTFFD AKNRR+LWGW+NESSSV+ D+KKGW+G+QAIPR + LDKS K LVQWPVVE+E
Sbjct: 318 SKTFFDSAKNRRILWGWINESSSVSGDIKKGWSGLQAIPRTIVLDKSRKQLVQWPVVELE 377
Query: 375 KLRVNQVQVPSKLLKGGSVIEVTGVTAAQADVEISFDVSDFKKAEKLDPGWTNPQLLCSQ 434
KLR N+V++PS LLKGGS+ EV GVTAAQADV+++F++SD KKAE +DP WTN QLLCS+
Sbjct: 378 KLRTNEVKLPSTLLKGGSLHEVIGVTAAQADVDVAFEISDLKKAEVMDPSWTNAQLLCSK 437
Query: 435 KGASVKGALGPFGLLALASKDLKEYTAVFFRIFKGE--DNKFVVLMCSDQSRS 485
KG SVKGALGPFGLLA SKDLKE TA+F+RIFK +NK+VVLMCSDQSRS
Sbjct: 438 KGTSVKGALGPFGLLAFVSKDLKEKTAIFYRIFKSHNNNNKYVVLMCSDQSRS 490
|
Source: Fragaria x ananassa Species: Fragaria x ananassa Genus: Fragaria Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|375300670|gb|AFA46812.1| cell wall invertase [Manihot esculenta] | Back alignment and taxonomy information |
|---|
Score = 751 bits (1940), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/472 (76%), Positives = 403/472 (85%), Gaps = 4/472 (0%)
Query: 17 GHGVVELQASHHVY---RNLQTSQSTSPNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHL 73
G+GV EL+ASHH+Y +NLQ S ++ +QPYRT YHFQPPKNW+NDPNG MIYKG+YHL
Sbjct: 18 GYGVFELEASHHIYHTFQNLQESAVSASSQPYRTSYHFQPPKNWMNDPNGPMIYKGLYHL 77
Query: 74 FYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAI 133
FYQYNPKGAVWGNIVW HSTSKDL+NW PH AIYPSQ SDING WSGSATILP KPAI
Sbjct: 78 FYQYNPKGAVWGNIVWGHSTSKDLVNWTPHKVAIYPSQPSDINGTWSGSATILPDGKPAI 137
Query: 134 FYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLG 193
YTGI+P N+QVQNLA+PKN SDPYL EWVKSP NPLMAP NQIN SSFRDPTTAW G
Sbjct: 138 LYTGINPLNQQVQNLAIPKNPSDPYLIEWVKSPNNPLMAPTPENQINASSFRDPTTAWRG 197
Query: 194 PDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLN 253
D RW+VI+GSKINRKGLA LYRSKDFV+WIKAKHPLHS K TGMWEC DFFPVS
Sbjct: 198 VDGRWKVIVGSKINRKGLAYLYRSKDFVYWIKAKHPLHSAKNTGMWECVDFFPVSANSPV 257
Query: 254 GLDTSDMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYY 313
G++ S +G + K+VLK SLDDTKH+ YT+G Y KDRY PDEGSVE D GLR+DYGK+Y
Sbjct: 258 GVEMSVLGSDFKYVLKASLDDTKHDCYTIGEYDHVKDRYTPDEGSVEGDPGLRYDYGKFY 317
Query: 314 ASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEI 373
ASKTFFD AKNRR+LWGW+NESSSV+DD+KKGWAGIQAIPR +WLDKSGK LVQWP+ EI
Sbjct: 318 ASKTFFDSAKNRRLLWGWLNESSSVSDDIKKGWAGIQAIPRVVWLDKSGKQLVQWPIQEI 377
Query: 374 EKLRVNQVQVPSKLLKGGSVIEVTGVTAAQADVEISFDVSDFKKAEKLDPGWTNPQLLCS 433
EKLRVN V +PS+ LKGGSV+EV GVTA+QADVEI+F VSDF KAE LDP WTNPQLLCS
Sbjct: 378 EKLRVNPVHLPSQYLKGGSVVEVPGVTASQADVEITFKVSDFSKAEVLDPSWTNPQLLCS 437
Query: 434 QKGASVKGALGPFGLLALASKDLKEYTAVFFRIFKGEDNKFVVLMCSDQSRS 485
+KG SV+G+LGPFGLL LASK ++EYT+VFFRIFKG+ NK VVLMCSDQSRS
Sbjct: 438 RKGGSVRGSLGPFGLLVLASKGMQEYTSVFFRIFKGQ-NKHVVLMCSDQSRS 488
|
Source: Manihot esculenta Species: Manihot esculenta Genus: Manihot Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225442303|ref|XP_002279788.1| PREDICTED: beta-fructofuranosidase, insoluble isoenzyme CWINV1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 724 bits (1870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/471 (72%), Positives = 389/471 (82%), Gaps = 3/471 (0%)
Query: 17 GHGVVELQASHHVYRNLQTSQSTS--PNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLF 74
GHG V L+ASH VY +LQ +S +QPYRTGYHFQP KNW+NDPNG MIYKG+YH F
Sbjct: 18 GHGFVPLEASHQVYIHLQNQSPSSLKTHQPYRTGYHFQPRKNWMNDPNGPMIYKGLYHFF 77
Query: 75 YQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIF 134
YQYNP GAVWGNIVWAHSTS DL+NW PH AI PSQ +DINGCWSGSATILP KP I
Sbjct: 78 YQYNPHGAVWGNIVWAHSTSTDLVNWTPHKYAISPSQPADINGCWSGSATILPNGKPVIL 137
Query: 135 YTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGP 194
YTGIDP N+QVQN+AVPKNLSDP+L EW K P+NPLM P +N IN SSFRDPTTAW G
Sbjct: 138 YTGIDPQNKQVQNMAVPKNLSDPFLLEWTKLPQNPLMEPTTINSINASSFRDPTTAWQGT 197
Query: 195 DKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNG 254
D RWRVIIGSKI RKGLAILYRSKDFV W KA+HPLHS K TGMWECPDFFPVS G
Sbjct: 198 DGRWRVIIGSKIKRKGLAILYRSKDFVRWTKAQHPLHSGKNTGMWECPDFFPVSINSSTG 257
Query: 255 LDTSDMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYA 314
+DTS + K+VLK+SLDDTKH+YYT+G+Y+ KD YVPD+GSV++DSGLR+DYGK+YA
Sbjct: 258 VDTSSISKTLKYVLKLSLDDTKHDYYTIGSYNREKDTYVPDKGSVDNDSGLRYDYGKFYA 317
Query: 315 SKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIE 374
SKTFFD AKNRR+LWGW+NESSSV D++KGW+G+QAIPR +WLDKSGK L+QWP+ EIE
Sbjct: 318 SKTFFDNAKNRRILWGWINESSSVEHDIEKGWSGVQAIPRNVWLDKSGKQLLQWPIAEIE 377
Query: 375 KLRVNQVQVPSKLLKGGSVIEVTGVTAAQADVEISFDVSDFKKAEKLDPGWTNPQLLCSQ 434
K R+ + S+ LKGGS +EV G+TA+QADVEISF +SDFKKAE D W+NPQLLCSQ
Sbjct: 378 KQRIKPGHMSSRELKGGSKVEVGGITASQADVEISFKISDFKKAEVFDESWSNPQLLCSQ 437
Query: 435 KGASVKGALGPFGLLALASKDLKEYTAVFFRIFKGEDNKFVVLMCSDQSRS 485
+GASVKG LGPFGL+ LASK ++EYTAVFFRIFK K+VVLMCSDQSRS
Sbjct: 438 RGASVKGGLGPFGLMVLASKGMEEYTAVFFRIFK-RQTKYVVLMCSDQSRS 487
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356556769|ref|XP_003546695.1| PREDICTED: beta-fructofuranosidase, cell wall isozyme-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/483 (71%), Positives = 400/483 (82%), Gaps = 5/483 (1%)
Query: 6 LSLFLFFALFLGHGVVELQASHHVYRNLQTSQSTSPNQPYRTGYHFQPPKNWINDPNGVM 65
L L F+L G+G++ ++A+HHVYRNLQT S S +QPYRT YHFQPPKNWINDPNG M
Sbjct: 7 LLLLAIFSLIYGNGILPIEATHHVYRNLQTLSSDSSDQPYRTAYHFQPPKNWINDPNGPM 66
Query: 66 IYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATI 125
YKG+YHLFYQYNPKGAVWGNIVWAHS SKDL+NW P D AIYPSQ SDINGCWSGSATI
Sbjct: 67 RYKGLYHLFYQYNPKGAVWGNIVWAHSVSKDLVNWTPLDHAIYPSQPSDINGCWSGSATI 126
Query: 126 LPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFR 185
LPG KPAI YTGIDP+N QVQNLA+PKN+SDP LREWVKSPKNPLMAP + N IN+SSFR
Sbjct: 127 LPGGKPAILYTGIDPNNHQVQNLALPKNMSDPLLREWVKSPKNPLMAPTSANMINSSSFR 186
Query: 186 DPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFF 245
DPTTAWLG D WRV+IGSKI+ +G+AILY+SK+FV+W++AK PLHS +GTGMWECPDF+
Sbjct: 187 DPTTAWLGKDGYWRVLIGSKIHTRGMAILYKSKNFVNWVQAKQPLHSAEGTGMWECPDFY 246
Query: 246 PV---STYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESD 302
PV GLDTS G N +HVLKVSLDD KH++Y +GTY AKD + PD G +S
Sbjct: 247 PVLNNKPSSTIGLDTSVNGDNVRHVLKVSLDDKKHDHYLIGTYDIAKDIFTPDNGFEDSQ 306
Query: 303 SGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSG 362
+ LR+DYGKYYASKT F+ KNRRVL GWVNESSSV+DD+KKGWAGI IPR +WL KSG
Sbjct: 307 TVLRYDYGKYYASKTIFEDGKNRRVLLGWVNESSSVSDDIKKGWAGIHTIPRAIWLHKSG 366
Query: 363 KHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQADVEISFDVSDFKKAEKLD 422
K LVQWPVVE+E LRVN V P+K++KGG +++VTGVTAAQADVEISFDV++F K E LD
Sbjct: 367 KQLVQWPVVELESLRVNPVHWPTKVVKGGEMLQVTGVTAAQADVEISFDVNEFGKGEVLD 426
Query: 423 PGWTNPQLLCSQKGASVKGALGPFGLLALASKDLKEYTAVFFRIFKGEDNKFVVLMCSDQ 482
W +PQ+LCS+KGA+VKG LGPFGLL AS+ L+EYTAVFFRIF+ + NK +VLMCSDQ
Sbjct: 427 Q-WVDPQILCSRKGAAVKGGLGPFGLLVFASRGLQEYTAVFFRIFRYQ-NKNLVLMCSDQ 484
Query: 483 SRS 485
SRS
Sbjct: 485 SRS 487
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|47078691|gb|AAT09980.1| cell wall apoplastic invertase [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/481 (70%), Positives = 389/481 (80%), Gaps = 4/481 (0%)
Query: 8 LFLFFALFLGHGVVELQASH---HVYRNLQTSQSTSPNQPYRTGYHFQPPKNWINDPNGV 64
L FF+ FLGHG V L+AS H + S +QPYRTGYHFQP KNW+NDPNG
Sbjct: 9 LGFFFSRFLGHGFVPLEASPPSLHPTSKISLPSSLKTHQPYRTGYHFQPRKNWMNDPNGP 68
Query: 65 MIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSAT 124
MIYKG+YH FYQYNP GAVWGNIVWAHSTS DL+NW PH AI PSQ +DINGCWSGSAT
Sbjct: 69 MIYKGLYHFFYQYNPHGAVWGNIVWAHSTSTDLVNWTPHKYAISPSQPADINGCWSGSAT 128
Query: 125 ILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSF 184
ILP KP I YTGIDP N+QVQN+AVPKNLSDP+L EW K +NPLM P +N IN SSF
Sbjct: 129 ILPNGKPVILYTGIDPQNKQVQNMAVPKNLSDPFLLEWTKLSQNPLMEPTTINSINASSF 188
Query: 185 RDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDF 244
RDPTTAW G D RWRVIIGSKI RKGLAILYRSKDFV W KA+HPLHS K TGMWECPDF
Sbjct: 189 RDPTTAWQGTDGRWRVIIGSKIKRKGLAILYRSKDFVRWTKAQHPLHSGKNTGMWECPDF 248
Query: 245 FPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESDSG 304
FPVS G+DTS + K+VLK+SLDDTKH+YYT+G+Y+ KD YVPD+GSV++DSG
Sbjct: 249 FPVSINSSTGVDTSSISKTLKYVLKLSLDDTKHDYYTIGSYNREKDTYVPDKGSVDNDSG 308
Query: 305 LRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSGKH 364
LR+DYGK+YASKTFFD AKNRR+LWGW+NESSSV D++KGW+G+QAIPR +WLDKSGK
Sbjct: 309 LRYDYGKFYASKTFFDNAKNRRILWGWINESSSVEHDIEKGWSGVQAIPRNVWLDKSGKQ 368
Query: 365 LVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQADVEISFDVSDFKKAEKLDPG 424
L+QWP+ EIEK R+ + S+ LKGGS +EV G+TA+QADVEISF +SDFKKAE D
Sbjct: 369 LLQWPIAEIEKQRIKPGHMSSRELKGGSKVEVGGITASQADVEISFKISDFKKAEVFDES 428
Query: 425 WTNPQLLCSQKGASVKGALGPFGLLALASKDLKEYTAVFFRIFKGEDNKFVVLMCSDQSR 484
W+NPQLLCSQ+GASVKG LGPFGL+ LASK ++EYTAVFFRIFK K+VVLMCSDQSR
Sbjct: 429 WSNPQLLCSQRGASVKGGLGPFGLMVLASKGMEEYTAVFFRIFK-RQTKYVVLMCSDQSR 487
Query: 485 S 485
S
Sbjct: 488 S 488
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449448102|ref|XP_004141805.1| PREDICTED: beta-fructofuranosidase, insoluble isoenzyme CWINV1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/492 (70%), Positives = 394/492 (80%), Gaps = 14/492 (2%)
Query: 4 FYLSLFLFFALFLGHGVVELQASHHVYRNLQTSQSTS-------PNQPYRTGYHFQPPKN 56
F ++FL L GH ++LQA HHVYR S TS QPYRT YHFQPPKN
Sbjct: 10 FLNNIFLLIFLLFGHEFLQLQALHHVYR---ASHRTSHFVLHQHQQQPYRTSYHFQPPKN 66
Query: 57 WINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDIN 116
WINDPNG MIYKGIYH FYQYNPKGAVWGNIVWAHSTS DLINW PHD AI+PSQ SDIN
Sbjct: 67 WINDPNGPMIYKGIYHFFYQYNPKGAVWGNIVWAHSTSTDLINWEPHDHAIFPSQPSDIN 126
Query: 117 GCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAM 176
GCWSGSATILPGEKPAI YTGI+P N+QVQNLAVPKNLSDPYLREWVKSPKNPLMAP
Sbjct: 127 GCWSGSATILPGEKPAILYTGINPKNQQVQNLAVPKNLSDPYLREWVKSPKNPLMAPTPQ 186
Query: 177 NQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGT 236
N IN SSFRDPTTAWLG D WRVIIGSKI+ +GLAI+YRSKDFV W + HPL
Sbjct: 187 NHINVSSFRDPTTAWLGRDGEWRVIIGSKIDARGLAIMYRSKDFVRWNQVDHPLRYKDDM 246
Query: 237 GMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDE 296
GMWECPDFFPV+ G G++ G + KH+LKVSLDDTKH+ YTVGTY+ KD Y+P++
Sbjct: 247 GMWECPDFFPVAKTGRTGVEMKVSGSHVKHILKVSLDDTKHDVYTVGTYNWKKDIYIPNK 306
Query: 297 GSVESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKL 356
GS+E +GLR+DYGKYYASKTFFD K RRVLWGWVNESSSV+DD+KKGW+G+QAIPR +
Sbjct: 307 GSIEGYNGLRYDYGKYYASKTFFDSQKKRRVLWGWVNESSSVDDDIKKGWSGVQAIPRAI 366
Query: 357 WLDKSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQADVEISFDVSDFK 416
WLD SGK L+QWP+VEI+KLR N+V++ +++LK GS IEV GVTAAQADVEISF V + K
Sbjct: 367 WLDASGKQLIQWPIVEIQKLRNNKVKLTNEVLKKGSTIEVKGVTAAQADVEISFKVENLK 426
Query: 417 KAEKLDPGWTNPQLLCSQKGASVK---GALGPFGLLALASKDLKEYTAVFFRIFKGEDNK 473
KAE L P W +PQLLCSQKG S G++GPFGLL LAS DLKEYT+VFF +FK + +K
Sbjct: 427 KAEILKPEWKDPQLLCSQKGTSSTTEGGSVGPFGLLVLASNDLKEYTSVFFTVFK-KPHK 485
Query: 474 FVVLMCSDQSRS 485
+VVLMCSDQSRS
Sbjct: 486 YVVLMCSDQSRS 497
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449523748|ref|XP_004168885.1| PREDICTED: beta-fructofuranosidase, insoluble isoenzyme CWINV1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 714 bits (1844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/492 (70%), Positives = 393/492 (79%), Gaps = 14/492 (2%)
Query: 4 FYLSLFLFFALFLGHGVVELQASHHVYRNLQTSQSTS-------PNQPYRTGYHFQPPKN 56
F ++FL L GH ++LQA HHVYR S TS QPYRT YHFQPPKN
Sbjct: 10 FLNNIFLLIFLLFGHEFLQLQALHHVYR---ASHRTSHFVLHQHQQQPYRTSYHFQPPKN 66
Query: 57 WINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDIN 116
WINDPNG MIYKGIYH FYQYNPKGAVWGNIVWAHSTS DLINW PHD AI+PSQ SDIN
Sbjct: 67 WINDPNGPMIYKGIYHFFYQYNPKGAVWGNIVWAHSTSTDLINWEPHDHAIFPSQPSDIN 126
Query: 117 GCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAM 176
GCWSGSATILPGEKPAI YTGI+P N+QVQNLAVPKNLSDPYLREWVKSPKNPLMAP
Sbjct: 127 GCWSGSATILPGEKPAILYTGINPKNQQVQNLAVPKNLSDPYLREWVKSPKNPLMAPTPQ 186
Query: 177 NQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGT 236
N IN SSFRDPTTAWLG D WRVIIGSKI+ +GLAI+YRSKDFV W + HPL
Sbjct: 187 NHINVSSFRDPTTAWLGRDGEWRVIIGSKIDSRGLAIMYRSKDFVRWNQVDHPLRYKDDM 246
Query: 237 GMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDE 296
GMWECPDFFPV+ G G++ G + KH+LKVSLDDTKH+ YTVGTY+ KD Y+P++
Sbjct: 247 GMWECPDFFPVAKTGRTGVEMKVSGSHVKHILKVSLDDTKHDVYTVGTYNWKKDIYIPNK 306
Query: 297 GSVESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKL 356
GS+E +GLR+DYGKYYASKTFFD K RRVLWGWVNESSSV+DD+KKGW+G+QAIPR +
Sbjct: 307 GSIEGYNGLRYDYGKYYASKTFFDSQKKRRVLWGWVNESSSVDDDIKKGWSGVQAIPRAI 366
Query: 357 WLDKSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQADVEISFDVSDFK 416
WLD SGK L+QWP+VEI+KLR N+V++ +++LK GS IEV GVTAAQADVEISF V + K
Sbjct: 367 WLDASGKQLIQWPIVEIQKLRDNKVKLTNEVLKKGSTIEVKGVTAAQADVEISFKVENLK 426
Query: 417 KAEKLDPGWTNPQLLCSQKGASVK---GALGPFGLLALASKDLKEYTAVFFRIFKGEDNK 473
KAE L P W +PQLLCSQKG S G++GPFGLL LAS DLKEYT+VFF +FK + +K
Sbjct: 427 KAEILKPEWKDPQLLCSQKGTSSTTEGGSVGPFGLLVLASNDLKEYTSVFFTVFKKQ-HK 485
Query: 474 FVVLMCSDQSRS 485
+VVLMC DQSRS
Sbjct: 486 YVVLMCGDQSRS 497
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297743094|emb|CBI35961.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 709 bits (1830), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/473 (71%), Positives = 387/473 (81%), Gaps = 8/473 (1%)
Query: 17 GHGVVELQASHHVYRNLQTSQSTS--PNQPYRTGYHFQPPKNWINDPNGV--MIYKGIYH 72
GHG V L+ASH VY +LQ +S +QPYRTGYHFQP KNW+N G+ MIYKG+YH
Sbjct: 18 GHGFVPLEASHQVYIHLQNQSPSSLKTHQPYRTGYHFQPRKNWMN---GIWPMIYKGLYH 74
Query: 73 LFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPA 132
FYQYNP GAVWGNIVWAHSTS DL+NW PH AI PSQ +DINGCWSGSATILP KP
Sbjct: 75 FFYQYNPHGAVWGNIVWAHSTSTDLVNWTPHKYAISPSQPADINGCWSGSATILPNGKPV 134
Query: 133 IFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWL 192
I YTGIDP N+QVQN+AVPKNLSDP+L EW K P+NPLM P +N IN SSFRDPTTAW
Sbjct: 135 ILYTGIDPQNKQVQNMAVPKNLSDPFLLEWTKLPQNPLMEPTTINSINASSFRDPTTAWQ 194
Query: 193 GPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGL 252
G D RWRVIIGSKI RKGLAILYRSKDFV W KA+HPLHS K TGMWECPDFFPVS
Sbjct: 195 GTDGRWRVIIGSKIKRKGLAILYRSKDFVRWTKAQHPLHSGKNTGMWECPDFFPVSINSS 254
Query: 253 NGLDTSDMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGKY 312
G+DTS + K+VLK+SLDDTKH+YYT+G+Y+ KD YVPD+GSV++DSGLR+DYGK+
Sbjct: 255 TGVDTSSISKTLKYVLKLSLDDTKHDYYTIGSYNREKDTYVPDKGSVDNDSGLRYDYGKF 314
Query: 313 YASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVE 372
YASKTFFD AKNRR+LWGW+NESSSV D++KGW+G+QAIPR +WLDKSGK L+QWP+ E
Sbjct: 315 YASKTFFDNAKNRRILWGWINESSSVEHDIEKGWSGVQAIPRNVWLDKSGKQLLQWPIAE 374
Query: 373 IEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQADVEISFDVSDFKKAEKLDPGWTNPQLLC 432
IEK R+ + S+ LKGGS +EV G+TA+QADVEISF +SDFKKAE D W+NPQLLC
Sbjct: 375 IEKQRIKPGHMSSRELKGGSKVEVGGITASQADVEISFKISDFKKAEVFDESWSNPQLLC 434
Query: 433 SQKGASVKGALGPFGLLALASKDLKEYTAVFFRIFKGEDNKFVVLMCSDQSRS 485
SQ+GASVKG LGPFGL+ LASK ++EYTAVFFRIFK K+VVLMCSDQSRS
Sbjct: 435 SQRGASVKGGLGPFGLMVLASKGMEEYTAVFFRIFK-RQTKYVVLMCSDQSRS 486
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 511 | ||||||
| TAIR|locus:2091606 | 584 | ATBFRUCT1 [Arabidopsis thalian | 0.917 | 0.803 | 0.690 | 1.7e-185 | |
| TAIR|locus:2205677 | 594 | FRUCT5 "beta-fructofuranosidas | 0.888 | 0.764 | 0.621 | 3.6e-160 | |
| TAIR|locus:2079944 | 590 | CWINV2 "cell wall invertase 2" | 0.900 | 0.779 | 0.578 | 2.2e-146 | |
| TAIR|locus:2049445 | 591 | cwINV4 "cell wall invertase 4" | 0.894 | 0.773 | 0.567 | 2.8e-146 | |
| TAIR|locus:2143099 | 550 | cwINV6 "6-&1-fructan exohydrol | 0.870 | 0.809 | 0.476 | 5.2e-113 | |
| TAIR|locus:2026177 | 648 | AT1G62660 [Arabidopsis thalian | 0.855 | 0.674 | 0.464 | 4.4e-107 | |
| TAIR|locus:2201966 | 664 | ATBETAFRUCT4 [Arabidopsis thal | 0.845 | 0.650 | 0.455 | 1.4e-105 | |
| UNIPROTKB|Q9FSV7 | 654 | 1-SST "Sucrose:sucrose 1-fruct | 0.845 | 0.660 | 0.422 | 7.3e-91 | |
| UNIPROTKB|Q48BH6 | 497 | scrB "Sucrose-6-phosphate hydr | 0.614 | 0.631 | 0.316 | 1e-36 | |
| UNIPROTKB|Q4KBP1 | 499 | scrB "Sucrose-6-phosphate hydr | 0.628 | 0.643 | 0.305 | 7.2e-36 |
| TAIR|locus:2091606 ATBFRUCT1 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1799 (638.3 bits), Expect = 1.7e-185, P = 1.7e-185
Identities = 330/478 (69%), Positives = 384/478 (80%)
Query: 17 GHGVVELQASHHVYRNLQTSQST-SP--NQPYRTGYHFQPPKNWINDPNGVMIYKGIYHL 73
G+ VV L+ASHHVY+ L S +T SP NQPYRTG+HFQPPKNW+NDPNG MIYKGIYHL
Sbjct: 20 GNYVVNLEASHHVYKRLTQSTNTKSPSVNQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHL 79
Query: 74 FYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAI 133
FYQ+NPKGAVWGNIVWAHSTS DLINW PH PAI+PS DINGCWSGSATILP KP I
Sbjct: 80 FYQWNPKGAVWGNIVWAHSTSTDLINWDPHPPAIFPSAPFDINGCWSGSATILPNGKPVI 139
Query: 134 FYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLG 193
YTGIDP N+QVQN+A PKNLSDPYLREW KSP NPLMAPDA+N IN SSFRDPTTAWLG
Sbjct: 140 LYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLG 199
Query: 194 PDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLN 253
DK+WRVIIGSKI+R+GLAI Y SKDF+ W K+ PLH G+GMWECPDFFPV+ +G N
Sbjct: 200 QDKKWRVIIGSKIHRRGLAITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSN 259
Query: 254 GLDTSDMG-PNT--KHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYG 310
G++TS G PN KHVLK+SLDDTKH+YYT+GTY KD++VPD G + R+DYG
Sbjct: 260 GVETSSFGEPNEILKHVLKISLDDTKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYG 319
Query: 311 KYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPV 370
KYYASKTFFD AKNRR+LWGW NESSSV DDV+KGW+GIQ IPRK+WLD+SGK L+QWPV
Sbjct: 320 KYYASKTFFDSAKNRRILWGWTNESSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPV 379
Query: 371 VEIEKLRVNQVQ-VPSKLLKGGSVIEVTGVTAAQADVEISFDVSDFKKAEKLDPGWTNPQ 429
E+E+LR QV+ + +K+LK GS +EV GVTAAQADVE+ F V D +KA+ ++P WT+PQ
Sbjct: 380 REVERLRTKQVKNLRNKVLKSGSRLEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQ 439
Query: 430 LLCSQKGASVKXXXXXXXXXXXXSKDLKEYTAVFFRIFKGEDN--KFVVLMCSDQSRS 485
L+CS+ SVK SK+L+EYT+V+FRIFK N K+VVLMCSDQSRS
Sbjct: 440 LICSKMNVSVKSGLGPFGLMVLASKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRS 497
|
|
| TAIR|locus:2205677 FRUCT5 "beta-fructofuranosidase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1560 (554.2 bits), Expect = 3.6e-160, P = 3.6e-160
Identities = 287/462 (62%), Positives = 344/462 (74%)
Query: 32 NLQTSQSTSPNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWG-NIVWA 90
+L+ S NQPYRTGYHFQP KNW+NDPNG MIYKGIYHLFYQYNP GAVW IVW
Sbjct: 25 DLEASSHQDLNQPYRTGYHFQPLKNWMNDPNGPMIYKGIYHLFYQYNPYGAVWDVRIVWG 84
Query: 91 HSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAV 150
HSTS DL+NWI PA PSQ SDINGCWSGS TILP KP I YTGID + QVQN+AV
Sbjct: 85 HSTSVDLVNWISQPPAFNPSQPSDINGCWSGSVTILPNGKPVILYTGIDQNKGQVQNVAV 144
Query: 151 PKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN-RK 209
P N+SDPYLREW K P+NPLM +A+N IN FRDPTTAWLG D WRVI+GS + R+
Sbjct: 145 PVNISDPYLREWSKPPQNPLMTTNAVNGINPDRFRDPTTAWLGRDGEWRVIVGSSTDDRR 204
Query: 210 GLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPN-TKHVL 268
GLAILY+S+DF +W ++ PLH TGMWECPDFFPVS G +G++TS +G N KHVL
Sbjct: 205 GLAILYKSRDFFNWTQSMKPLHYEDLTGMWECPDFFPVSITGSDGVETSSVGENGIKHVL 264
Query: 269 KVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYASKTFFDGAKNRRVL 328
KVSL +T H+YYT+G+Y KD YVPD G V+++S R DYGKYYASKTF+D K RR+L
Sbjct: 265 KVSLIETLHDYYTIGSYDREKDVYVPDLGFVQNESAPRLDYGKYYASKTFYDDVKKRRIL 324
Query: 329 WGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLRVNQVQVPSKLL 388
WGWVNESS DD++KGW+G+Q+ PRK+WLD+SGK L+QWP+ EIE LR QV K+L
Sbjct: 325 WGWVNESSPAKDDIEKGWSGLQSFPRKIWLDESGKELLQWPIEEIETLRGQQVNWQKKVL 384
Query: 389 KGGSVIEVTGVTAAQADVEISFDVSDFKKAEKLDPGWTNPQLLCSQKGASVKXXXXXXXX 448
K GS ++V GVTAAQADVE+SF V + +KA+ ++P WT+PQ +CSQ SV
Sbjct: 385 KAGSTLQVHGVTAAQADVEVSFKVKELEKADVIEPSWTDPQKICSQGDLSVMSGLGPFGL 444
Query: 449 XXXXSKDLKEYTAVFFRIFKGEDN-----KFVVLMCSDQSRS 485
S D++EYT+V+FRIFK D+ K+VVLMCSDQSRS
Sbjct: 445 MVLASNDMEEYTSVYFRIFKSNDDTNKKTKYVVLMCSDQSRS 486
|
|
| TAIR|locus:2079944 CWINV2 "cell wall invertase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1430 (508.4 bits), Expect = 2.2e-146, P = 2.2e-146
Identities = 272/470 (57%), Positives = 334/470 (71%)
Query: 23 LQASHHVYRNLQTSQSTSPNQ--P-YRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNP 79
+ A H V++ LQ S+STS P +RT YHFQPP++WINDPN M+YKG+YHLFYQYNP
Sbjct: 23 VDAFHKVFKKLQ-SKSTSLESVSPLHRTAYHFQPPRHWINDPNAPMLYKGVYHLFYQYNP 81
Query: 80 KGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGID 139
KGAVWGNIVWAHS SKDLINW +PAIYPS+ DING WSGSAT +PG+ P I YTGI
Sbjct: 82 KGAVWGNIVWAHSVSKDLINWEALEPAIYPSKWFDINGTWSGSATHVPGKGPVILYTGIT 141
Query: 140 PHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGP-DKRW 198
+ Q+QN A+P++LSDPYL+ W+K NP++ PD N N S+FRDPTTAW D W
Sbjct: 142 ENQTQIQNYAIPQDLSDPYLKTWIKPDDNPIVKPD--NGENGSAFRDPTTAWFNKKDGYW 199
Query: 199 RVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVS-TYGLNGLDT 257
R+++GSK +G+A +Y+S+DF W+K+K P+HS K TGMWECPDFFPVS T NGLD
Sbjct: 200 RMLVGSKRKNRGIAYMYKSRDFKKWVKSKRPIHSRKKTGMWECPDFFPVSVTDKKNGLDF 259
Query: 258 SDMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYASKT 317
S GPN KHVLKVSLD T++EYYT+GTY T KDRY PD + + GLRFDYG YYASKT
Sbjct: 260 SYDGPNAKHVLKVSLDLTRYEYYTLGTYDTKKDRYRPDGYTPDGWDGLRFDYGNYYASKT 319
Query: 318 FFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLR 377
FFD NRR+LWGW NES +V DD KGWAGIQ IPR + LD SGK LV WP+ EIE LR
Sbjct: 320 FFDDKTNRRILWGWANESDTVQDDTVKGWAGIQLIPRTILLDSSGKQLVFWPIEEIESLR 379
Query: 378 VNQVQVPSKLLKGGSVIEVTGVTAAQADVEISFDVSDFKKAEKLDPGW-TNPQLLCSQKG 436
VQ+ ++ ++ G EV G+T AQ DV+++F+V + +KAEK D + T P LC+ KG
Sbjct: 380 GKNVQMTNQKMEMGQRFEVQGITPAQVDVDVTFNVGNLEKAEKFDESFATKPLELCNLKG 439
Query: 437 ASVKXXXXXXXXXXXXSKDLKEYTAVFFRIFK-GEDNKFVVLMCSDQSRS 485
++V + DL+EYT VFFR+FK NK VLMCSD S
Sbjct: 440 SNVNGGVGPFGLITLATSDLEEYTPVFFRVFKDAASNKPKVLMCSDAKPS 489
|
|
| TAIR|locus:2049445 cwINV4 "cell wall invertase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1429 (508.1 bits), Expect = 2.8e-146, P = 2.8e-146
Identities = 262/462 (56%), Positives = 329/462 (71%)
Query: 23 LQASHHVYRNLQTSQSTSPNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGA 82
+ A H +Y LQ+ S N +R +HFQPPK+WINDPNG + YKG+YHLFYQYN KGA
Sbjct: 27 IDAFHQIYEELQSESVESVNHLHRPSFHFQPPKHWINDPNGPVYYKGLYHLFYQYNTKGA 86
Query: 83 VWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHN 142
VWGNI+WAHS SKDL+NW +PA+ PS+ DI G WSGS TI+PG+ P I YTG++ +
Sbjct: 87 VWGNIIWAHSVSKDLVNWEALEPALSPSKWFDIGGTWSGSITIVPGKGPIILYTGVNQNE 146
Query: 143 RQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVII 202
Q+QN A+P++ SDPYLR+W+K NP+ PD +N S+FRDPTTAW D WR ++
Sbjct: 147 TQLQNYAIPEDPSDPYLRKWIKPDDNPIAIPDYT--MNGSAFRDPTTAWFSKDGHWRTVV 204
Query: 203 GSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVS-TYGLNGLDTSDMG 261
GSK R+G+A +YRS+DF HW+KAKHP+HS + TGMWECPDFFPVS T NGLD +G
Sbjct: 205 GSKRKRRGIAYIYRSRDFKHWVKAKHPVHSKQSTGMWECPDFFPVSLTDFRNGLDLDYVG 264
Query: 262 PNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYASKTFFDG 321
PNTKHVLKVSLD T++EYYT+G Y KDRY+PD + + GLRFDYG +YASKTFFD
Sbjct: 265 PNTKHVLKVSLDITRYEYYTLGKYDLKKDRYIPDGNTPDGWEGLRFDYGNFYASKTFFDY 324
Query: 322 AKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLRVNQV 381
KNRR+LWGW NES +V DD+ KGWAG+Q IPR + LD S K LV WPV EIE LR N V
Sbjct: 325 KKNRRILWGWANESDTVEDDILKGWAGLQVIPRTVLLDSSKKQLVFWPVEEIESLRGNYV 384
Query: 382 QVPSKLLKGGSVIEVTGVTAAQADVEISFDVSDFKKAEKLDPGWT-NPQLLCSQKGASVK 440
++ + +K G IEV G+T AQADVE++F V +KAE DP +T P LC+ KG++V+
Sbjct: 385 RMNNHDIKMGQRIEVKGITPAQADVEVTFYVGSLEKAEIFDPSFTWKPLELCNIKGSNVR 444
Query: 441 XXXXXXXXXXXXSKDLKEYTAVFFRIFKG-EDNKFVVLMCSD 481
+ DL+EYT VFFR+F + +K VLMCSD
Sbjct: 445 GGVGPFGLITLATPDLEEYTPVFFRVFNDTKTHKPKVLMCSD 486
|
|
| TAIR|locus:2143099 cwINV6 "6-&1-fructan exohydrolase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1115 (397.6 bits), Expect = 5.2e-113, P = 5.2e-113
Identities = 219/460 (47%), Positives = 286/460 (62%)
Query: 46 RTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGN--IVWAHSTSKDLINWIPH 103
RT +HFQP +NW+NDPN M YKG YHLFYQ NP + I+W HS S+D++NWI
Sbjct: 17 RTSFHFQPQRNWLNDPNAPMYYKGFYHLFYQNNPLAPEFSRTRIIWGHSVSQDMVNWIQL 76
Query: 104 DPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHNRQ-VQNLAVPKNLSDPYLREW 162
+PA+ PS+ DIN CWSGSATILP +P I YTG+D +N+Q V +A PK++SDP LREW
Sbjct: 77 EPALVPSESFDINSCWSGSATILPDGRPVILYTGLDVNNKQQVTVVAEPKDVSDPLLREW 136
Query: 163 VKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN--RKGLAILYRSKDF 220
VK NP+M P + N FRDPT AW G D +WRV+IG+K KG+AILYRS DF
Sbjct: 137 VKPKYNPVMVPPSNVPFNC--FRDPTEAWKGQDGKWRVLIGAKEKDTEKGMAILYRSDDF 194
Query: 221 VHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYY 280
V W K PL +GTGMWECPDFFPVS G G+DTS + +HVLK S ++ Y
Sbjct: 195 VQWTKYPVPLLESEGTGMWECPDFFPVSITGKEGVDTSVNNASVRHVLKASFGG--NDCY 252
Query: 281 TVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVND 340
+G YS+ + + D + + LR+D+G +YASK FFD KNRR+ WGWV E+ S D
Sbjct: 253 VIGKYSSETEDFSADYEFTNTSADLRYDHGTFYASKAFFDSVKNRRINWGWVIETDSKED 312
Query: 341 DVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLRVNQVQVPSKL-LKGGSVIEVTGV 399
D KKGWAG+ +PR++W+D SGK L+QWP+ EI LR V + K GS E++G+
Sbjct: 313 DFKKGWAGLMTLPREIWMDTSGKKLMQWPIEEINNLRTKSVSLDDCYEFKTGSTFEISGI 372
Query: 400 TAAQADVEISFDVSDFKK-AEKLDPGWTNPQLLCSQKGASVKXXXXXXXXXXXXSKDLKE 458
TAAQADVE++F++ + E LD + L + +SV S DL E
Sbjct: 373 TAAQADVEVTFNLPFLENNPEILDADQVDDATLFD-RDSSVGCVYGPFGLLALASSDLSE 431
Query: 459 YTAVFFRIFKGEDNKFVVLMCSDQSRSLQFFSFNISSISH 498
TA+FF++ + N + V+MCS + RS NI SH
Sbjct: 432 QTAIFFKVIR-RGNGYAVVMCSSEKRSS--LRDNIKKSSH 468
|
|
| TAIR|locus:2026177 AT1G62660 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1059 (377.8 bits), Expect = 4.4e-107, P = 4.4e-107
Identities = 207/446 (46%), Positives = 276/446 (61%)
Query: 46 RTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDP 105
RT +HFQP KNW+NDPNG + YKG YH FYQYNP AVWG+IVW H+ SKDLI+W+
Sbjct: 106 RTAFHFQPEKNWMNDPNGPLFYKGWYHFFYQYNPNAAVWGDIVWGHAVSKDLIHWLYLPI 165
Query: 106 AIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKS 165
A+ P Q D NG W+GSAT L + YTG QVQNLA P++ SDP L +WVK
Sbjct: 166 AMVPDQWYDANGVWTGSATFLDDGSIVMLYTGSTDEFVQVQNLAYPEDPSDPLLLKWVKF 225
Query: 166 PKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIK 225
NP++ P I FRDPTTAW +WR+ IGSKINR G++++Y + DF + K
Sbjct: 226 SGNPVLVPPP--GIGAKDFRDPTTAWKTSSGKWRITIGSKINRTGISLIYDTTDFKTYEK 283
Query: 226 AKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVGTY 285
+ LH V TGMWEC DF+PVS LNGLDTS GP+ KHV+K S+DDT+ ++Y +GTY
Sbjct: 284 HETLLHQVPNTGMWECVDFYPVSKTQLNGLDTSVNGPDVKHVIKASMDDTRIDHYAIGTY 343
Query: 286 STAKDRYVPDEGSVES--DSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVK 343
+ +VPD S++ +GLR+DYGKYYASKTF+D K RR+LWGW+ ES S DV+
Sbjct: 344 DDSNATWVPDNPSIDVGISTGLRYDYGKYYASKTFYDQNKGRRILWGWIGESDSEAADVQ 403
Query: 344 KGWAGIQAIPRKLWLD-KSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAA 402
KGW+ +Q IPR + LD ++ K+LVQWPV EI+ LR++ + + G+V+ V +A
Sbjct: 404 KGWSSVQGIPRTVVLDTRTHKNLVQWPVEEIKSLRLSSKKF-DMTIGPGTVVPVDVGSAT 462
Query: 403 QADVEISFDVS--DFKKAEKLDPGWTNPQLLCSQKGASV-KXXXXXXXXXXXXSKDLKEY 459
Q D+E F++ D K D + + C G S + + L E
Sbjct: 463 QLDIEAEFEIKTDDLKLFFDDDSVEADNKFSCETNGGSTARGALGPFGFSVLADEGLSEQ 522
Query: 460 TAVFFRIFKGEDNKFVVLMCSDQSRS 485
T V+F + KG+ +K + C+D SRS
Sbjct: 523 TPVYFYVTKGKHSKLNTVFCTDTSRS 548
|
|
| TAIR|locus:2201966 ATBETAFRUCT4 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1045 (372.9 bits), Expect = 1.4e-105, P = 1.4e-105
Identities = 206/452 (45%), Positives = 285/452 (63%)
Query: 46 RTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDP 105
RT +HFQP +NW+NDPNG + YKG YH FYQYNP AVWG+IVW H+ S+DLI+W+ H P
Sbjct: 121 RTAFHFQPEQNWMNDPNGPLFYKGWYHFFYQYNPNAAVWGDIVWGHAVSRDLIHWV-HLP 179
Query: 106 -AIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVK 164
A+ Q D NG W+GSAT LP + YTG QVQNLA P++ +DP L +WVK
Sbjct: 180 IAMVADQWYDSNGVWTGSATFLPDGSIVMLYTGSTDKAVQVQNLAYPEDPNDPLLLKWVK 239
Query: 165 SPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWI 224
P NP++ P I FRDPTTAW + +WR+ IGSK+N+ G++++Y + DF +
Sbjct: 240 FPGNPVLVPPP--GILPKDFRDPTTAWKTSEGKWRITIGSKLNKTGISLVYDTIDFKTYE 297
Query: 225 KAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVGT 284
K LH V TGMWEC DF+PVS NGLDTS GP+ KH++K S+DDT+ ++Y VGT
Sbjct: 298 KLDTLLHRVPNTGMWECVDFYPVSKTAGNGLDTSVNGPDVKHIVKASMDDTRFDHYAVGT 357
Query: 285 YSTAKDRYVPDEGSVE--SDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDV 342
Y + ++PD+ +++ + LR+DYGK+YASK+F+D K RRVLW W+ ES S DV
Sbjct: 358 YFDSNGTWIPDDPTIDVGMTASLRYDYGKFYASKSFYDQNKGRRVLWSWIGESDSEASDV 417
Query: 343 KKGWAGIQAIPRKLWLD-KSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTA 401
+KGW+ +Q IPR + LD K+GK+LVQWPV EI+ LR++ Q ++ GSV+ V +A
Sbjct: 418 QKGWSSLQGIPRTVVLDTKTGKNLVQWPVEEIKSLRLSSKQFDLEV-GPGSVVPVDVGSA 476
Query: 402 AQADVEISFDVSDFKKAEKLDPGWTNPQLL-------CSQKGAS-VKXXXXXXXXXXXXS 453
AQ D+E F+++ E LD N ++ C + G S V+ +
Sbjct: 477 AQLDIEAEFEINK----ESLDKIIGNASVVAEAEEFSCEKSGGSTVRGALGPFGFSVLAT 532
Query: 454 KDLKEYTAVFFRIFKGEDNKFVVLMCSDQSRS 485
+ L E T V+F + KG+D++ C+D SRS
Sbjct: 533 ESLSEQTPVYFYVAKGKDSELKTFFCTDTSRS 564
|
|
| UNIPROTKB|Q9FSV7 1-SST "Sucrose:sucrose 1-fructosyltransferase" [Festuca arundinacea (taxid:4606)] | Back alignment and assigned GO terms |
|---|
Score = 906 (324.0 bits), Expect = 7.3e-91, P = 7.3e-91
Identities = 190/450 (42%), Positives = 258/450 (57%)
Query: 46 RTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDP 105
RTG+HFQP K+++NDPNG + Y G YHLFYQYNPKG WGNI WAH+ SKD++NW H P
Sbjct: 122 RTGFHFQPEKHYMNDPNGPVYYGGWYHLFYQYNPKGDSWGNIAWAHAVSKDMVNW-RHLP 180
Query: 106 -AIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVK 164
A+ P Q D NG +GS T+LP + + YTG QVQ LA P + SDP LREW+K
Sbjct: 181 LAMVPDQWYDSNGVLTGSITVLPDGQVILLYTGNTDTLAQVQCLATPADPSDPLLREWIK 240
Query: 165 SPKNPLMAPDAMNQINTSSFRDPTTAWLG-PDKRWRVIIGSKIN--RKGLAILYRSKDFV 221
P NP++ P I FRDP TAW D WR +IGSK + G+ + Y++KDFV
Sbjct: 241 HPANPILYPPP--GIGLKDFRDPLTAWFDHSDNTWRTVIGSKDDDGHAGIILSYKTKDFV 298
Query: 222 HWIKAKHPLH-SVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYY 280
++ +H GTGM+EC D +PV L D P+ VLK S DD +H+YY
Sbjct: 299 NYELMPGNMHRGPDGTGMYECIDLYPVGGNSSEMLGGDD-SPDVLFVLKESSDDERHDYY 357
Query: 281 TVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVND 340
+G + A + + P + ++ GLR+D+GKYYASK+F+D KNRR++W ++ E+ S
Sbjct: 358 ALGRFDAAANIWTPIDQELDLGIGLRYDWGKYYASKSFYDQKKNRRIVWAYIGETDSEQA 417
Query: 341 DVKKGWAGIQAIPRKLWLDKSGK-HLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGV 399
D+ KGWA + IPR + LDK + +L+QWPV E++ LR N + + GSVI +
Sbjct: 418 DITKGWANLMTIPRTVELDKKTRTNLIQWPVEELDTLRRNSTDLSGITVDAGSVIRLPLH 477
Query: 400 TAAQADVEISFDV--SDFKKAEKLDPGWTNPQLLCSQKGASVKXXXXXXXXXXXXSKDLK 457
AQ D+E SF + SD + D + CS GA+V+ +
Sbjct: 478 QGAQIDIEASFQLNSSDVDALTEADVSYN-----CSTSGAAVRGALGPFGLLVLAN-GRT 531
Query: 458 EYTAVFFRIFKGEDNKFVVLMCSDQSRSLQ 487
E TAV+F + KG D C D+SRS Q
Sbjct: 532 EQTAVYFYVSKGVDGALQTHFCHDESRSTQ 561
|
|
| UNIPROTKB|Q48BH6 scrB "Sucrose-6-phosphate hydrolase" [Pseudomonas syringae pv. phaseolicola 1448A (taxid:264730)] | Back alignment and assigned GO terms |
|---|
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 107/338 (31%), Positives = 157/338 (46%)
Query: 23 LQASHHVYRNLQTSQSTSPNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGA 82
L+ +HH ++ +Q YR GYH PP W+NDPNGV+ ++G YH+FYQ++P A
Sbjct: 9 LERAHHALKD-SLAQVI---HDYRPGYHLAPPAGWMNDPNGVVYFRGEYHVFYQHHPFDA 64
Query: 83 VWGNIVWAHSTSKDLINWIPHDP-AIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPH 141
WG + W H+ S DL++W H P A+ P D +GC+SGSA + G+ A+ YTG
Sbjct: 65 KWGPMYWGHAKSADLVHW-QHLPIALAPGDDFDQDGCFSGSAVVC-GDTLALIYTGHTWL 122
Query: 142 NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVI 201
L + + + + K+ + D+ Q FRDP W D W +I
Sbjct: 123 GEVGDELLIRQVQCLATSLDGINFVKHGAVI-DSPPQDTIIHFRDPKV-WQ-QDDHWYLI 179
Query: 202 IGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTG-MWECPDFFPVSTYGLNGLDTSDM 260
G+++ + L LYRS D W + +G G MWECPD F L+G D
Sbjct: 180 AGARLGDRPLLPLYRSVDLHAWEFVSYVSSGNEGDGYMWECPDLFR-----LDGRDVLLY 234
Query: 261 GPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYASKTFFD 320
P + H Y VG + R +E D+G F YA++T
Sbjct: 235 SPQGMPAQGYERLNKFHTGYRVGQIDS--QRQFNGGPFIELDNGHDF-----YAAQTLV- 286
Query: 321 GAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWL 358
A RR++W W++ S W G+ +PR+L L
Sbjct: 287 AADGRRLVWAWLDMWESPTPTATHLWRGMLGLPRELEL 324
|
|
| UNIPROTKB|Q4KBP1 scrB "Sucrose-6-phosphate hydrolase" [Pseudomonas protegens Pf-5 (taxid:220664)] | Back alignment and assigned GO terms |
|---|
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 111/363 (30%), Positives = 175/363 (48%)
Query: 45 YRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHD 104
YR YH PP W+NDPNG++ ++G YH+FYQ++P A WG + W H+ S+DL++W H
Sbjct: 32 YRLAYHLAPPVGWMNDPNGLVYFRGEYHVFYQHHPYSAQWGPMHWGHAKSRDLVHW-EHL 90
Query: 105 P-AIYPSQQSDINGCWSGSATILPGEKPAIFYTGI-------DPHN-RQVQNLAVPKNLS 155
P A+ P + D +GC+SGSA ++ + + YTG D + RQVQ LA + +
Sbjct: 91 PIALAPGEAYDRDGCFSGSAVVMD-DVLYLIYTGHTWLGAPGDERSIRQVQCLA---SST 146
Query: 156 DPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILY 215
D S P++ D + FRDP W ++ W + +G++ +LY
Sbjct: 147 DGV----AFSKHGPVI--DRAPEPGIMHFRDPKV-WRRGEQWW-MALGARQGDAPQLLLY 198
Query: 216 RSKDFVHWIKAKHPLHSVKGTG--MWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273
RS D HW + L + + MWECPD F L+G D P L S
Sbjct: 199 RSGDLHHWTYLRCALQGQRESDGYMWECPDLFE-----LDGCDVFLYSPQG---LNPSGY 250
Query: 274 DTKHEYYTVGTYSTAKDR-YVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGW 331
D +++ DR Y + G + D+G +YA++T RR+LW W
Sbjct: 251 DNWNKFQNSYRMGLLDDRGYFSEGGELRE-----LDHGHDFYAAQTLL-APDGRRLLWAW 304
Query: 332 VNESSSVNDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGG 391
++ S + W G ++PR+L ++G+ L P E+ LR +Q + +++ G
Sbjct: 305 MDMWDSPMPSQAQHWCGALSLPREL--SRNGERLRMRPARELAALRQSQRTLAIGVVESG 362
Query: 392 SVI 394
+ I
Sbjct: 363 NCI 365
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q43089 | INV1_PEA | 3, ., 2, ., 1, ., 2, 6 | 0.6714 | 0.9354 | 0.8612 | N/A | no |
| Q43866 | INV1_ARATH | 3, ., 2, ., 1, ., 2, 6 | 0.7035 | 0.9197 | 0.8047 | yes | no |
| Q0JDC6 | INV3_ORYSJ | 3, ., 2, ., 1, ., 2, 6 | 0.5918 | 0.9315 | 0.8122 | yes | no |
| Q01IS8 | INV3_ORYSI | 3, ., 2, ., 1, ., 2, 6 | 0.5918 | 0.9315 | 0.8122 | N/A | no |
| Q39692 | INV2_DAUCA | 3, ., 2, ., 1, ., 2, 6 | 0.5836 | 0.9334 | 0.8057 | N/A | no |
| Q39693 | INV3_DAUCA | 3, ., 2, ., 1, ., 2, 6 | 0.5841 | 0.9197 | 0.8061 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 511 | |||
| smart00640 | 437 | smart00640, Glyco_32, Glycosyl hydrolases family 3 | 1e-179 | |
| pfam00251 | 305 | pfam00251, Glyco_hydro_32N, Glycosyl hydrolases fa | 1e-155 | |
| cd08996 | 298 | cd08996, GH32_B_Fructosidase, Glycosyl hydrolase f | 2e-95 | |
| COG1621 | 486 | COG1621, SacC, Beta-fructosidases (levanase/invert | 6e-67 | |
| cd08772 | 286 | cd08772, GH43_62_32_68, Glycosyl hydrolase familie | 3e-53 | |
| TIGR01322 | 445 | TIGR01322, scrB_fam, sucrose-6-phosphate hydrolase | 8e-51 | |
| cd08995 | 280 | cd08995, GH32_Aec43_like, Glycosyl hydrolase famil | 1e-26 | |
| cd08979 | 276 | cd08979, GH_J, Glycosyl hydrolase families 32 and | 4e-17 |
| >gnl|CDD|214757 smart00640, Glyco_32, Glycosyl hydrolases family 32 | Back alignment and domain information |
|---|
Score = 509 bits (1312), Expect = e-179
Identities = 190/450 (42%), Positives = 246/450 (54%), Gaps = 59/450 (13%)
Query: 50 HFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYP 109
HFQPPK W+NDPNG++ YKG YHLFYQYNP GAVWGNI W H+ SKDL++W A+ P
Sbjct: 1 HFQPPKGWMNDPNGLIYYKGKYHLFYQYNPFGAVWGNIHWGHAVSKDLVHWTHLPVALAP 60
Query: 110 SQQSDINGCWSGSATILPGEKPAIFYTGI--DPHNRQVQNLAVPKNLSDPYLREWVKSPK 167
+ D NG +SGSA I PG ++ YTG N QVQ A SD W K
Sbjct: 61 DEWYDSNGVFSGSAVIDPG-NLSLLYTGNVAIDTNVQVQRQAYQCAASDDLGGTWTKYDG 119
Query: 168 NPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIG-SKINRKGLAILYRSKDFVHWIKA 226
NP++ P T FRDP W DK W ++IG S +++G+A+LYRS D +W
Sbjct: 120 NPVLTPP--PGGGTEHFRDPKVFWYDGDK-WYMVIGASDEDKRGIALLYRSTDLKNWTLL 176
Query: 227 KHPLHSVKG--TGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVGT 284
LHS+ G GMWECPD FP+ G +KHVLKVS YY VG
Sbjct: 177 SEFLHSLLGDTGGMWECPDLFPLPGE----------GDTSKHVLKVSPQGGSGNYYFVGY 226
Query: 285 YSTAKDRYVPDEGSVESDSGLRFDYG-KYYASKTFFDGAKNRRVLWGWVNESSSVNDDVK 343
+ D + PD+ ++ GLR DYG +YAS+TF+D NRR+L GW+ S DDV
Sbjct: 227 FDGD-DTFTPDDPV-DTGHGLRLDYGFDFYASQTFYDPDGNRRILIGWMGNWDSYADDVP 284
Query: 344 -KGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAA 402
KGWAG ++PR+L LD +G L+QWPV E+E LR N+ ++ + LK GSV E+ G+TA+
Sbjct: 285 TKGWAGALSLPRELTLDLTGGKLLQWPVEELESLR-NKKELLNLTLKNGSVTELLGLTAS 343
Query: 403 Q--ADVEISFDVSDFKKAEKLDPGWTNPQLLCSQKGASVKGALGPFGLLALASKDLKEYT 460
++E+SF+V G GPFGLL ASKDL E T
Sbjct: 344 GDSYEIELSFEVD--------------------------SGTAGPFGLLVRASKDLSEQT 377
Query: 461 AVFFRIFKGEDNKFVVLMCSDQSRSLQFFS 490
AV++ + G +C D+ S F
Sbjct: 378 AVYYDVSNG-------TLCLDRRSSGGSFD 400
|
Length = 437 |
| >gnl|CDD|215819 pfam00251, Glyco_hydro_32N, Glycosyl hydrolases family 32 N-terminal domain | Back alignment and domain information |
|---|
Score = 444 bits (1144), Expect = e-155
Identities = 146/328 (44%), Positives = 184/328 (56%), Gaps = 31/328 (9%)
Query: 50 HFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYP 109
HFQPPK W+NDPNG++ YKG YHLFYQYNP GAVWGN W H+ SKDL++W A+ P
Sbjct: 1 HFQPPKGWMNDPNGLVYYKGEYHLFYQYNPFGAVWGNKHWGHAVSKDLVHWEHLPVALAP 60
Query: 110 SQQSDINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNP 169
+ D NGC+SGSA +LP + YTG + QVQ LA + R W K P NP
Sbjct: 61 DEWYDSNGCFSGSAVVLPD-NLVLLYTGNTDRSTQVQCLAYSADDG----RTWTKYPGNP 115
Query: 170 LMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN-RKGLAILYRSKDFVHWIKAKH 228
++ T FRDP AW PD +W +++G++ N ++G A+LYRSKD +W
Sbjct: 116 VIINPPPG--YTKHFRDPKVAWYEPDGKWYMVLGAQDNDKRGKALLYRSKDLKNWELLGE 173
Query: 229 PLHSV-KGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD---DTKHEYYTVGT 284
LHSV G GMWECPD FPV KHVLK S + +YY +GT
Sbjct: 174 LLHSVPDGGGMWECPDLFPVDG---------KDNGPVKHVLKFSPQGYQNGYQDYYFIGT 224
Query: 285 YSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSVNDDV- 342
+ D + P R DYG +YAS+TF+D RR+L GW+ E S DDV
Sbjct: 225 FDADGDTFTP-------PDEQRLDYGFDFYASQTFYDPDGRRRILIGWMGEWDSEADDVP 277
Query: 343 -KKGWAGIQAIPRKLWLDKSGKHLVQWP 369
KGWAG +IPR+L L G L+QWP
Sbjct: 278 TTKGWAGALSIPRELTLKDEGGKLLQWP 305
|
This domain corresponds to the N-terminal domain of glycosyl hydrolase family 32 which forms a five bladed beta propeller structure. Length = 305 |
| >gnl|CDD|185737 cd08996, GH32_B_Fructosidase, Glycosyl hydrolase family 32, beta-fructosidases | Back alignment and domain information |
|---|
Score = 290 bits (745), Expect = 2e-95
Identities = 115/330 (34%), Positives = 151/330 (45%), Gaps = 45/330 (13%)
Query: 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDI 115
W+NDPNG++ + G YHLFYQYNP G VWGN+ W H+TSKDL++W A+ P D
Sbjct: 1 GWMNDPNGLVYFNGKYHLFYQYNPFGPVWGNMHWGHATSKDLVHWEHLPVALAPDDPYDS 60
Query: 116 NGCWSGSATILPGEKPAIFYTGIDPH---NRQVQNLAVPKNLSDPYLREWVKSPKNPLMA 172
GC+SGSA + K +FYTG RQ Q LA S R + K NP++
Sbjct: 61 GGCFSGSAVVDDNGKLVLFYTGNVKLDGGRRQTQCLAY----STDDGRTFTKYEGNPVIP 116
Query: 173 PDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-NRKGLAILYRSKDFVHWIKAKHPL- 230
P T+ FRDP W D +W +++G+ + G +LYRS D +W + L
Sbjct: 117 PP---DGYTTHFRDPKVFWH--DGKWYMVLGAGTEDGTGRILLYRSDDLKNW-EYLGELL 170
Query: 231 -HSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSL------DDTKHEYYTVG 283
MWECPD FP + K VL S + Y VG
Sbjct: 171 TSLGDFGYMWECPDLFP-------------LDVEGKWVLIFSPQGLEPEGNGSGTGYLVG 217
Query: 284 TYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSVNDDV 342
+ + E DYG +YA +TF D RR+L GW+
Sbjct: 218 DFDGTTFTFDHTE-------FGELDYGFDFYAPQTFVD-PDGRRILIGWMGNWDYEYPTP 269
Query: 343 KKGWAGIQAIPRKLWLDKSGKHLVQWPVVE 372
+ GWAG +PR+L L K G L Q PV E
Sbjct: 270 EDGWAGCLTLPRELSL-KDGGRLYQRPVRE 298
|
Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic nucleophile and a glutamate acts as the general acid/base; a conserved aspartate residue in the Arg-Asp-Pro (RDP) motif stabilizes the transition state. These enzymes are predicted to display a 5-fold beta-propeller fold as found for GH43 and CH68. The breakdown of sucrose is widely used as a carbon or energy source by bacteria, fungi, and plants. Invertase is used commercially in the confectionery industry, since fructose has a sweeter taste than sucrose and a lower tendency to crystallize. A common structural feature of all these enzymes is a 5-bladed beta-propeller domain, similar to GH43, that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. Length = 298 |
| >gnl|CDD|224536 COG1621, SacC, Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 223 bits (570), Expect = 6e-67
Identities = 119/385 (30%), Positives = 179/385 (46%), Gaps = 56/385 (14%)
Query: 32 NLQTSQSTSPNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAH 91
L+ + PYR YHF PP W+NDPNG++ + G YHLFYQYNP GA G W H
Sbjct: 15 ELEKISESVAKSPYRPQYHFTPPTGWLNDPNGLIYFDGKYHLFYQYNPFGAAHGPKHWGH 74
Query: 92 STSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTG-IDPHN---RQVQN 147
+ SKDL++W A+ P D +GC+SGSA ++ ++FYTG + N +Q Q
Sbjct: 75 AVSKDLVHWEHLPIALAPDDDYDSHGCYSGSA-VVDDGNLSLFYTGNVRDSNGIRQQTQC 133
Query: 148 LAVPKNLSDPYLREWVKSPKNPLM-APDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSK- 205
+A ++ + K NP++ P+ T FRDP W +W +++G++
Sbjct: 134 IAYSEDGGT-----FEKYSGNPIIDQPEGY----TPHFRDPKVVW-DEGGKWWMMLGAQG 183
Query: 206 INRKGLAILYRSKDFVHWIKAKHPLHSVKGTG-MWECPDFFP----------VSTYGLNG 254
+ KG +LY S D +W G G MWECPD F +NG
Sbjct: 184 EDLKGTILLYESDDLKNWQFTGEFGLEQGGLGYMWECPDLFELDGEDVLLFWPQGLSING 243
Query: 255 LDTSDMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGK-YY 313
+ ++ + Y VG + E ++ D+G +Y
Sbjct: 244 GEYDNIYQSG---------------YFVGDFD-------GKEFKLDDGQFRELDFGFDFY 281
Query: 314 ASKTFFDGAKNRRVLWGWVN--ESSSVNDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVV 371
A +TF D RR+L GW+ + ++ + +GW G +PR+L L + GK L Q PV
Sbjct: 282 APQTFLD-PDGRRILIGWMGNWDYTNNYPTIDEGWRGAMTLPRELTL-EDGK-LYQTPVR 338
Query: 372 EIEKLRVNQVQVPSKLLKGGSVIEV 396
E+E LR + + L G S +E+
Sbjct: 339 ELESLRKPEEAAHNTTLSGNSKLEL 363
|
Length = 486 |
| >gnl|CDD|185718 cd08772, GH43_62_32_68, Glycosyl hydrolase families: GH43, GH62, GH32, GH68 | Back alignment and domain information |
|---|
Score = 181 bits (460), Expect = 3e-53
Identities = 80/313 (25%), Positives = 113/313 (36%), Gaps = 41/313 (13%)
Query: 59 NDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAI----YPSQQSD 114
DPN ++ Y G Y++F+ + K GN AH+TSKDL+NW H A+ D
Sbjct: 1 ADPN-LIKYNGTYYIFFSGDDKN---GNPGIAHATSKDLVNWTDHPVALVWWARRGGPKD 56
Query: 115 INGCWSGSATILPGEKPAIFYTGIDPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAP 173
G W+ S + K ++YT + N+Q +A ++ + P+ + P
Sbjct: 57 SGGIWAPSIVYIENGKFYLYYTDVSFTKNQQTIGVATAEDGNGPWTDYI-----GGPVLP 111
Query: 174 DAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN-RKGLAILYRSKDFVHWIKAKHPL-- 230
D + S+FRDP D +W ++ GS + G LY S D W K L
Sbjct: 112 DNPPAADVSNFRDPFVFED-DDGKWYLVFGSGDHHNFGGIFLYESDDDTTWKKGSAELLI 170
Query: 231 HSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTK------HEYYTVGT 284
+G E P N K+ L S++ T Y
Sbjct: 171 SEGEGGKQIEGPGLLKK---------------NGKYYLFYSINGTGRVDSTYSIGYARSE 215
Query: 285 YSTAKDRYVPDEGSVESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKK 344
T D S +G Y + F D A R VL D
Sbjct: 216 SDTGPYVPKSDTSGGLSLTGGNDGGVGPYHAAAFND-AGGRVVLVYHAYNVQYA-DAPTY 273
Query: 345 GWAGIQAIPRKLW 357
GW AIPR LW
Sbjct: 274 GWGRSLAIPRLLW 286
|
Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32 comprises sucrose-6-phosphate hydrolases, invertases, inulinases, levanases, eukaryotic fructosyltransferases, and bacterial fructanotransferases while GH68 consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10); beta-fructofuranosidase (EC 3.2.1.26); inulosucrase (EC 2.4.1.9), while GH68 consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10); beta-fructofuranosidase (EC 3.2.1.26); inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Members of this clan are retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) that catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic nucleophile and a glutamate acts as the general acid/base; a conserved aspartate residue in the Arg-Asp-Pro (RDP) motif stabilizes the transition state. Structures of all families in the two clans manifest a funnel-shaped active site that comprises two subsites with a single route for access by ligands. Length = 286 |
| >gnl|CDD|233357 TIGR01322, scrB_fam, sucrose-6-phosphate hydrolase | Back alignment and domain information |
|---|
Score = 179 bits (456), Expect = 8e-51
Identities = 113/369 (30%), Positives = 160/369 (43%), Gaps = 72/369 (19%)
Query: 44 PYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPH 103
+R +H QP +NDPNG++ +KG YHLFYQ+ P G V G W H TSKDL++W
Sbjct: 12 EWRPTFHIQPQTGLLNDPNGLIYFKGEYHLFYQWFPFGPVHGLKSWGHYTSKDLVHWEDE 71
Query: 104 DPAIYPSQQSDINGCWSGSATILPGEKPAIFYTG----IDPHNRQVQNLAV-PKNLSDPY 158
A+ P D +GC+SGSA G + + YTG D + Q LA +
Sbjct: 72 GVALAPDDPYDSHGCYSGSAVDNNG-QLTLMYTGNVRDSDWNRESYQCLATMDDDGH--- 127
Query: 159 LREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSK-INRKGLAILYRS 217
+ ++ T+ FRDP W W ++IG++ KG +LYRS
Sbjct: 128 ----FEKFGIVVIELPPAGY--TAHFRDPKV-WKHNGH-WYMVIGAQTETEKGSILLYRS 179
Query: 218 KDFVHWIKAKHPLHSVKGTG---------MWECPDFFPVSTYGLNGLDTSDMGPNTKHVL 268
KD +W + + G G MWECPD F + + + VL
Sbjct: 180 KDLKNWTF----VGEILGDGQNGLDDRGYMWECPDLFSL---------------DGQDVL 220
Query: 269 KVS---LDDTKHEY-------YTVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYASKTF 318
S LD + ++Y Y VG + E D G FD +YA +TF
Sbjct: 221 LFSPQGLDASGYDYQNIYQNGYIVGQLDYEAPEFTHGTEFHELDYG--FD---FYAPQTF 275
Query: 319 FDGAKNRRVLWGWV----NESSSVNDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIE 374
RR+L W+ + + D GWA +PR+L L K GK LVQ P+ E++
Sbjct: 276 LA-PDGRRILVAWMGLPEIDYPTDRD----GWAHCMTLPRELTL-KDGK-LVQTPLRELK 328
Query: 375 KLRVNQVQV 383
LR +
Sbjct: 329 ALRTEEHIN 337
|
[Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 445 |
| >gnl|CDD|185736 cd08995, GH32_Aec43_like, Glycosyl hydrolase family 32 | Back alignment and domain information |
|---|
Score = 108 bits (273), Expect = 1e-26
Identities = 78/293 (26%), Positives = 119/293 (40%), Gaps = 50/293 (17%)
Query: 69 GIYHLFYQYNPKGAV--WGNIVWAHSTSKDLINWIPHDPAIYPSQQSDIN-GCWSGSATI 125
G +H+FY ++P+ W+ T+KDL+N+ H AI D + +GS I
Sbjct: 10 GTFHIFYLHDPRNGPPEGLRHPWSLLTTKDLVNYEDHGEAIPRGGDEDDDDAIGTGSV-I 68
Query: 126 LPGEKPAIFYTG--IDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSS 183
FYTG +D +QV A +L W K P+ L+A +
Sbjct: 69 KGEGTYHAFYTGHNLDGKPKQVVMHATSDDLI-----TWTKDPEFILIAD--GEGYEKND 121
Query: 184 FRDPTTAWLGPDKRWRVIIGS-----KINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGM 238
+RDP W + + +++ + NR+G L+ SKD +W + + P ++ M
Sbjct: 122 WRDPFVFWNEEEGCYWMLLATRLLDGPYNRRGCIALFTSKDLKNW-EYEEPFYAPGLYFM 180
Query: 239 WECPDFFPVSTYGLNG---LDTSDMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPD 295
ECPD F + L S+ N K +VS S PD
Sbjct: 181 PECPDLFK-----MGDWWYLVYSEFSENRKTHYRVSK-------------SPFGPWRAPD 222
Query: 296 EGSVESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAG 348
+ + FD +YA+KT DG RR L+GWV + +DD W G
Sbjct: 223 DDT--------FDGRAFYAAKTASDG--TRRFLFGWVPTKAGNDDDGNWEWGG 265
|
This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic nucleophile and a glutamate acts as the general acid/base; a conserved aspartate residue in the Arg-Asp-Pro (RDP) motif stabilizes the transition state. These enzymes are predicted to display a 5-fold beta-propeller fold as found for GH43 and CH68. The breakdown of sucrose is widely used as a carbon or energy source by bacteria, fungi, and plants. Invertase is used commercially in the confectionery industry, since fructose has a sweeter taste than sucrose and a lower tendency to crystallize. Length = 280 |
| >gnl|CDD|185720 cd08979, GH_J, Glycosyl hydrolase families 32 and 68, which for the clan GH-J | Back alignment and domain information |
|---|
Score = 81.3 bits (201), Expect = 4e-17
Identities = 68/278 (24%), Positives = 93/278 (33%), Gaps = 40/278 (14%)
Query: 68 KGIYHLFYQYNPKGAVWGNIVW-AHSTSKDLINWIPHDPAIYPSQQS--DINGCWSGSAT 124
G YHLFY P+G GN ++S D W + P D G W+ S
Sbjct: 13 VGKYHLFYLAAPRGGGDGNTSRIGAASSDDGTWWTRPPAPLPPGPPGSFDDGGVWTPSVV 72
Query: 125 ILPGEKPAIFYTGIDPHNRQVQN--LAVPKNLSDPYLREWVKSPKNPLMA--PDAMNQI- 179
P +FYTG D VQ LA K+ L W K NP+
Sbjct: 73 RDPDGTYRMFYTGYDRPKGAVQRIGLATSKD-----LIHWTKHGPNPVPRWYESGNPGPW 127
Query: 180 NTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAI-LYRSKDFVHWIKAKHPLHSVKGT-- 236
+ ++RDP WR+ G++ + AI L S D +HW P G
Sbjct: 128 DDHAWRDPAVVRDEEGGGWRMYYGARDADERGAIGLATSPDLIHWTPVPPPPGPRTGYDD 187
Query: 237 GMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVS-LDDTKHEYYTVGTYSTAKDRYVPD 295
G E P + + + L S ++ Y VGT R +
Sbjct: 188 GQLEVPQVVKI---------------DGRWYLLYSGRNEDAKTGYRVGTALFGPGRPLTL 232
Query: 296 EGSVESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVN 333
D YA++ DG VL G+V
Sbjct: 233 AE--------LLDRTDLYAARPVPDGEGGGVVLEGFVQ 262
|
This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH68 consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10); beta-fructofuranosidase (EC 3.2.1.26); inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. A common structural feature of all these enzymes is a 5-bladed beta-propeller domain, similar to GH43, that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. Length = 276 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 511 | |||
| KOG0228 | 571 | consensus Beta-fructofuranosidase (invertase) [Car | 100.0 | |
| COG1621 | 486 | SacC Beta-fructosidases (levanase/invertase) [Carb | 100.0 | |
| TIGR01322 | 445 | scrB_fam sucrose-6-phosphate hydrolase. | 100.0 | |
| smart00640 | 437 | Glyco_32 Glycosyl hydrolases family 32. | 100.0 | |
| PF00251 | 308 | Glyco_hydro_32N: Glycosyl hydrolases family 32 N-t | 100.0 | |
| cd08996 | 298 | GH32_B_Fructosidase Glycosyl hydrolase family 32, | 100.0 | |
| cd08995 | 280 | GH32_Aec43_like Glycosyl hydrolase family 32. This | 100.0 | |
| cd08979 | 276 | GH_J Glycosyl hydrolase families 32 and 68, which | 100.0 | |
| cd08772 | 286 | GH43_62_32_68 Glycosyl hydrolase families: GH43, G | 100.0 | |
| cd08997 | 349 | GH68 Glycosyl hydrolase family 68, includes levans | 99.95 | |
| cd08994 | 291 | GH43_like_2 Glycosyl hydrolase 43-like family cons | 99.91 | |
| cd09004 | 275 | GH43_bXyl Glycosyl hydrolase family 43, includes m | 99.84 | |
| cd08993 | 268 | GH43_DUF377 Glycosyl hydrolase family 43 containin | 99.84 | |
| cd08984 | 294 | GH43_5 Glycosyl hydrolase family 43. This glycosyl | 99.83 | |
| cd08999 | 287 | GH43_ABN_2 Glycosyl hydrolase family 43. This glyc | 99.79 | |
| cd08990 | 274 | GH43_AXH_like Glycosyl hydrolase family 43, includ | 99.74 | |
| cd08978 | 271 | GH_F Glycosyl hydrolase families 43 and 62 form CA | 99.69 | |
| cd08991 | 294 | GH43_bXyl_2 Glycosyl hydrolase family 43. This gly | 99.67 | |
| cd08992 | 349 | GH43_like_1 Glycosyl hydrolase family 43, uncharac | 99.62 | |
| cd08998 | 288 | GH43_ABN_1 Glycosyl hydrolase family 43. This glyc | 99.61 | |
| cd08984 | 294 | GH43_5 Glycosyl hydrolase family 43. This glycosyl | 99.58 | |
| cd08985 | 265 | GH43_6 Glycosyl hydrolase family 43. This glycosyl | 99.51 | |
| cd09000 | 288 | GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xy | 99.46 | |
| cd09003 | 311 | GH43_AXH_1 Glycosyl hydrolase family 43. This glyc | 99.44 | |
| PF04616 | 286 | Glyco_hydro_43: Glycosyl hydrolases family 43; Int | 99.4 | |
| PF04041 | 312 | DUF377: Domain of unknown function (DUF377); Inter | 99.4 | |
| cd08983 | 276 | GH43_4 Glycosyl hydrolase family 43. This glycosyl | 99.39 | |
| cd08988 | 279 | GH43_ABN Glycosyl hydrolase family 43. This glycos | 99.35 | |
| cd08981 | 291 | GH43_2 Glycosyl hydrolase family 43. This glycosyl | 99.34 | |
| cd08979 | 276 | GH_J Glycosyl hydrolase families 32 and 68, which | 99.32 | |
| cd08992 | 349 | GH43_like_1 Glycosyl hydrolase family 43, uncharac | 99.28 | |
| cd08989 | 269 | GH43_XYL Glycosyl hydrolase family 43, beta-D-xylo | 99.25 | |
| cd09001 | 269 | GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xy | 99.19 | |
| cd08986 | 269 | GH43_7 Glycosyl hydrolase family 43. This glycosyl | 99.17 | |
| cd08980 | 288 | GH43_1 Glycosyl hydrolase family 43. This glycosyl | 99.1 | |
| cd09002 | 280 | GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xy | 99.09 | |
| cd08993 | 268 | GH43_DUF377 Glycosyl hydrolase family 43 containin | 99.04 | |
| COG2152 | 314 | Predicted glycosylase [Carbohydrate transport and | 98.94 | |
| cd08982 | 295 | GH43_3 Glycosyl hydrolase family 43. This glycosyl | 98.93 | |
| cd08987 | 303 | GH62 Glycosyl hydrolase family 62, characterized a | 98.89 | |
| PF02435 | 428 | Glyco_hydro_68: Levansucrase/Invertase; InterPro: | 98.86 | |
| cd08994 | 291 | GH43_like_2 Glycosyl hydrolase 43-like family cons | 98.71 | |
| cd08995 | 280 | GH32_Aec43_like Glycosyl hydrolase family 32. This | 98.66 | |
| cd08999 | 287 | GH43_ABN_2 Glycosyl hydrolase family 43. This glyc | 98.61 | |
| cd08991 | 294 | GH43_bXyl_2 Glycosyl hydrolase family 43. This gly | 98.59 | |
| cd08990 | 274 | GH43_AXH_like Glycosyl hydrolase family 43, includ | 98.58 | |
| cd08978 | 271 | GH_F Glycosyl hydrolase families 43 and 62 form CA | 98.57 | |
| PF04041 | 312 | DUF377: Domain of unknown function (DUF377); Inter | 98.43 | |
| cd08772 | 286 | GH43_62_32_68 Glycosyl hydrolase families: GH43, G | 98.42 | |
| cd08986 | 269 | GH43_7 Glycosyl hydrolase family 43. This glycosyl | 98.4 | |
| cd08983 | 276 | GH43_4 Glycosyl hydrolase family 43. This glycosyl | 98.37 | |
| cd08989 | 269 | GH43_XYL Glycosyl hydrolase family 43, beta-D-xylo | 98.29 | |
| cd09002 | 280 | GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xy | 98.28 | |
| cd08998 | 288 | GH43_ABN_1 Glycosyl hydrolase family 43. This glyc | 98.24 | |
| cd08996 | 298 | GH32_B_Fructosidase Glycosyl hydrolase family 32, | 98.22 | |
| cd08981 | 291 | GH43_2 Glycosyl hydrolase family 43. This glycosyl | 98.21 | |
| cd09004 | 275 | GH43_bXyl Glycosyl hydrolase family 43, includes m | 98.0 | |
| cd08985 | 265 | GH43_6 Glycosyl hydrolase family 43. This glycosyl | 97.95 | |
| PF04616 | 286 | Glyco_hydro_43: Glycosyl hydrolases family 43; Int | 97.89 | |
| TIGR01322 | 445 | scrB_fam sucrose-6-phosphate hydrolase. | 97.86 | |
| cd08997 | 349 | GH68 Glycosyl hydrolase family 68, includes levans | 97.84 | |
| COG3507 | 549 | XynB Beta-xylosidase [Carbohydrate transport and m | 97.78 | |
| COG2152 | 314 | Predicted glycosylase [Carbohydrate transport and | 97.73 | |
| smart00640 | 437 | Glyco_32 Glycosyl hydrolases family 32. | 97.67 | |
| cd08988 | 279 | GH43_ABN Glycosyl hydrolase family 43. This glycos | 97.65 | |
| cd09003 | 311 | GH43_AXH_1 Glycosyl hydrolase family 43. This glyc | 97.64 | |
| cd09001 | 269 | GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xy | 97.59 | |
| cd08980 | 288 | GH43_1 Glycosyl hydrolase family 43. This glycosyl | 97.41 | |
| PF03664 | 271 | Glyco_hydro_62: Glycosyl hydrolase family 62 ; Int | 97.39 | |
| cd09000 | 288 | GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xy | 97.22 | |
| cd00260 | 351 | Sialidase Sialidases or neuraminidases function to | 97.01 | |
| PF13088 | 275 | BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A | 97.0 | |
| cd08982 | 295 | GH43_3 Glycosyl hydrolase family 43. This glycosyl | 96.64 | |
| cd08987 | 303 | GH62 Glycosyl hydrolase family 62, characterized a | 96.45 | |
| PF00251 | 308 | Glyco_hydro_32N: Glycosyl hydrolases family 32 N-t | 95.96 | |
| PF13088 | 275 | BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A | 95.85 | |
| cd00260 | 351 | Sialidase Sialidases or neuraminidases function to | 94.98 | |
| PF13859 | 310 | BNR_3: BNR repeat-like domain; PDB: 3B69_A. | 93.57 | |
| PF08244 | 86 | Glyco_hydro_32C: Glycosyl hydrolases family 32 C t | 92.09 | |
| COG3507 | 549 | XynB Beta-xylosidase [Carbohydrate transport and m | 88.11 | |
| PTZ00334 | 780 | trans-sialidase; Provisional | 88.05 | |
| PF13810 | 316 | DUF4185: Domain of unknown function (DUF4185) | 86.45 | |
| COG3940 | 324 | Predicted beta-xylosidase [General function predic | 81.18 |
| >KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-111 Score=865.00 Aligned_cols=488 Identities=60% Similarity=1.041 Sum_probs=452.8
Q ss_pred HHHHHHHHHHHhhceeeecccccccccccccCC-CCCCCCCCccccccCCCCCccCCcceEEECCEEEEEeeeCCCCCCC
Q 010428 6 LSLFLFFALFLGHGVVELQASHHVYRNLQTSQS-TSPNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVW 84 (511)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Rp~yHf~p~~gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~ 84 (511)
++|+|+..+++.+.|..+.+.+.+++.|+...+ ...+.++||.|||||++|||||| +|++|.|||||||||+++.|
T Consensus 9 ~~l~l~~~~~~~~~vk~~da~~~~~~~l~~~s~~~~~n~~~Rp~~HFqP~k~wMN~P---~~ykG~yHLFyQyNP~gavw 85 (571)
T KOG0228|consen 9 VLLLLLVTLNLTNYVKGLDAFHQNYAGLQSESPSNTVNQPDRPGFHFQPPKGWMNDP---MYYKGKYHLFYQYNPKGAVW 85 (571)
T ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhhhcccCccccccccCCceeecCCCcccccCc---cccCcEEEEEEecCCCCcee
Confidence 467777788889988888999999888866433 46788999999999999999999 89999999999999999999
Q ss_pred CCcEEEEEEeCCCCcceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEEEeccCCCCcceEEEEEecCCCCcccceeee
Q 010428 85 GNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVK 164 (511)
Q Consensus 85 g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K 164 (511)
|+++||||+|+|||||+.+|+||.|++++|.+|||||||+++++|+++++|||.+.+.+|+|.+|++.|.+||+|++|.|
T Consensus 86 g~ivWGHavSkDLinW~~lp~Ai~Ps~~~ding~wSGSati~~~~~~vilytg~d~~~rqVqn~a~p~d~sdp~l~~w~k 165 (571)
T KOG0228|consen 86 GNIVWGHAVSKDLINWEALPPAIAPSEWFDINGCWSGSATIDPNNSPVILYTGIDPNNRQVQNYAYPKDVSDPQLIAWSK 165 (571)
T ss_pred eeeEeeeecchhhccccccCcccCCCCccccCccccceEEEccCCCeEEEecccCcCceEEEEEeccCCCCchhhheeec
Confidence 99999999999999999999999999999999999999999999999999999998889999999999999999999999
Q ss_pred cCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCccEEEEEEcCCCCCcEEcccccccCCCCCceecCce
Q 010428 165 SPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDF 244 (511)
Q Consensus 165 ~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~g~wECPdl 244 (511)
.++||++.++.-.+++...||||+++|.+++|+|+|++|+.++.+|.+.+|+|+|+++|+..+.|++....+||||||||
T Consensus 166 ~~gnp~~~p~~V~~in~s~FRDPttaW~~~dgkWrm~vgsk~~q~g~a~~Y~S~Df~~W~k~~~~~h~~~~tgmwECPdf 245 (571)
T KOG0228|consen 166 DGGNPFMKPDKVLGINSSQFRDPTTAWFGQDGKWRMTVGSKIKQRGKAIIYSSDDFKHWTKSSVPLHSGDLTGMWECPDF 245 (571)
T ss_pred CCCceeeccccccCCChhhccCCceeeecCCCcEEEEEEeecCccceEEEEeccchhhhhcccccccccCccceEECCCc
Confidence 99999997552246778899999999999999999999999888899999999999999999899999889999999999
Q ss_pred EEeccCCCCCccccCCCCCceeEEEEeeCCCceeEEEEEEEeCCCCeeecCCCCcCCCCccccccCCCccceeeecCCCC
Q 010428 245 FPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYASKTFFDGAKN 324 (511)
Q Consensus 245 f~l~~~g~~g~~~s~~~~~~k~vL~~S~~~~~~~~Y~iG~~d~~~~~F~p~~~~~d~~~~~~lD~G~fYA~qtf~d~~~g 324 (511)
|++...|++|++.+..+...|||++.|+.+++.++|+||+||+++.+|+|+..+.+.....+.|||.|||+|||.|..++
T Consensus 246 fpVs~tg~~g~d~s~~~~~nkhvlkasl~gt~~d~Y~IG~yd~~~~~fvpd~~~~~~~~dlr~Dyg~~YASkTFfds~~~ 325 (571)
T KOG0228|consen 246 FPVSITGTDGLDWSLFGSINKHVLKASLGGTSNDQYFIGTYDGEKDTFVPDDGFSRVSVDLRYDYGKYYASKTFFDSVKG 325 (571)
T ss_pred EEecccCCCCceEEEeccccccccccccCCceeEEEEEecccCCcceeeccCCcccccccccccchhhhhhhhhccccCC
Confidence 99999999999988877777999999999889999999999999999999998877766789999999999999999999
Q ss_pred cEEEEEeccCCCCCCCCCCCCCccccccceEEEEec-CCCeEEecchHHHHHhhhcceeccceEecCCcEEEEcccccce
Q 010428 325 RRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDK-SGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQ 403 (511)
Q Consensus 325 rril~gW~~~~~~~~~~~~~gW~g~lslPReL~l~~-~g~~L~q~Pv~el~~LR~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (511)
|||+|||++|+++..++..+||+|+|||||+++|++ .|++|.|+|++|++.||...+...+..+++|...++.++++.|
T Consensus 326 rrIlwgWa~es~~~~dd~~kgw~g~qtipRki~Ld~~s~k~l~qwpv~eie~Lr~~~v~~~~~~~~~g~~~~v~~~t~~q 405 (571)
T KOG0228|consen 326 RRILWGWASESDYTNDDPTKGWRGLQTIPRKIWLDTESGKQLTQWPVEEIEPLRLSNVKMDNKLFKPGSLNEVSGITAAQ 405 (571)
T ss_pred cEEEEEecccCcccccchhcccccccccceEEEeeccCCCcccccchheeecccccccCccccccCCceeEEeccccccc
Confidence 999999999999999999999999999999999998 7889999999999999999998888888999999999999999
Q ss_pred eeeEEEEEEcccccccccCCCccCccccccccCCcccCCcccceeEEeecCCCceeeEEEEEEEeCCCCcEEEEEecCCC
Q 010428 404 ADVEISFDVSDFKKAEKLDPGWTNPQLLCSQKGASVKGALGPFGLLALASKDLKEYTAVFFRIFKGEDNKFVVLMCSDQS 483 (511)
Q Consensus 404 ~die~~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~g~~Gl~v~~s~~~~E~t~i~f~~~~~~~~~~~~~~~~d~~ 483 (511)
+|+|+.|++.++++++.+++.+++++.+|..++..++++.||||+.++|+.+++|+|+++|+++|.. .++.++||+|++
T Consensus 406 ~dvev~f~~~~Leka~~~~~~~t~~~~~c~~~~~~v~~~~gpfgl~~la~~dl~eyt~v~f~i~k~~-~~~~v~~csd~~ 484 (571)
T KOG0228|consen 406 ADVEVTFEVEDLEKAIVIEPSWTDPQFLCLTGGSSVREGLGPFGLMVLASSDLEEYTPVGFRIFKAK-KKYVVLMCSDQS 484 (571)
T ss_pred ccceEEEEecccccccccCccccccceeeecCCcccccCCCcceEEEEeecCcccceeeeEEEeecC-CcceeEEeccCC
Confidence 9999999999999999898888889999998889999999999999999999999999999999987 488999999999
Q ss_pred CccCccccCccCCC
Q 010428 484 RSLQFFSFNISSIS 497 (511)
Q Consensus 484 ~Ss~~~~~~~~~~~ 497 (511)
|||+.-+.-+.+..
T Consensus 485 ~sSl~~d~~k~~~~ 498 (571)
T KOG0228|consen 485 RSSLAEDNYKPSIG 498 (571)
T ss_pred Ccccccccccccee
Confidence 99998776554443
|
|
| >COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-87 Score=710.35 Aligned_cols=414 Identities=30% Similarity=0.548 Sum_probs=317.6
Q ss_pred CCCCCCCCccccccCCCCCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCccCCCe
Q 010428 39 TSPNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGC 118 (511)
Q Consensus 39 ~~~~~~~Rp~yHf~p~~gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D~~g~ 118 (511)
....++|||.|||+||.||||||||++|++|+|||||||+|+++.||+||||||+|+|||||+++|+||.|++++|.+||
T Consensus 22 ~~~~~~~Rp~yHftP~~G~mNDPNG~iy~~G~yHlFYQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~piaL~Pd~~~d~~g~ 101 (486)
T COG1621 22 SVAKSPYRPQYHFTPPTGWLNDPNGLIYFDGKYHLFYQYNPFGAAHGPKHWGHAVSKDLVHWEHLPIALAPDDDYDSHGC 101 (486)
T ss_pred hccCCCCCceeeecCCcCceECCCceeEECCEEEEEEecCCCCCCCCCceeeeeccCCcccceECCceecCCCccccCCc
Confidence 45568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeeEEEcCCCceEEEEeccCC----CCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCC
Q 010428 119 WSGSATILPGEKPAIFYTGIDP----HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGP 194 (511)
Q Consensus 119 ~SGsav~~~dg~~~l~YTg~~~----~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~ 194 (511)
||||||++ +|...+||||+.. .+.+.||+|+|+|+ .+|+|+.+|||+..| +++ +.+||||||+|. +
T Consensus 102 ySGSAV~~-~~~l~lfytg~v~~~~~~r~~~Q~iA~s~dg-----~~f~K~~~~~i~~~p--~~~-t~hFRDPKv~w~-~ 171 (486)
T COG1621 102 YSGSAVVD-DGNLSLFYTGNVRDSNGIRQQTQCIAYSEDG-----GTFEKYSGNPIIDQP--EGY-TPHFRDPKVVWD-E 171 (486)
T ss_pred eeeeEEEe-CCcEEEEEccceeccCCcceeEEEEEEEcCC-----CceEeccCCceecCC--Ccc-cccCCCCccccc-C
Confidence 99999985 8999999999754 37789999999995 578997789999888 666 789999998898 7
Q ss_pred CCeEEEEEeeec-CCccEEEEEEcCCCCCcEEccccccc-CCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEee
Q 010428 195 DKRWRVIIGSKI-NRKGLAILYRSKDFVHWIKAKHPLHS-VKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSL 272 (511)
Q Consensus 195 ~g~w~m~~ga~~-~~~G~i~ly~S~Dl~~W~~~~~~l~~-~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~ 272 (511)
+|+|||++||+. +..|+|+||+|+||++|++.+++... ...++||||||||+|+ +...+ .+|++.++.
T Consensus 172 ~~~~~~mlgAq~~~~~g~i~lY~S~DL~~W~~~g~~~~~~~~~gym~ECPdlf~l~--~~~~~--------~~~pqg~~~ 241 (486)
T COG1621 172 GGKWWMMLGAQGEDLKGTILLYESDDLKNWQFTGEFGLEQGGLGYMWECPDLFELD--GEDVL--------LFWPQGLSI 241 (486)
T ss_pred CCcEEEEEEEecCCCCceEEEEeCCCccCcEEEEeeccCCCceeeEEECCCeEEec--CcCce--------EEcceeeec
Confidence 899999999987 56899999999999999999876555 3345699999999999 42222 366666664
Q ss_pred CC-----CceeEEEEEEEeCCCCeeecCCCCcCCCCccccccCC-CccceeeecCCCCcEEEEEeccCCCCC--CCCCCC
Q 010428 273 DD-----TKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSV--NDDVKK 344 (511)
Q Consensus 273 ~~-----~~~~~Y~iG~~d~~~~~F~p~~~~~d~~~~~~lD~G~-fYA~qtf~d~~~grril~gW~~~~~~~--~~~~~~ 344 (511)
++ .....|++|+||++ +|.+... .+.+||+|+ |||||||.++ +||||++|||++|+.. .++...
T Consensus 242 ~~~~~~n~~~~~Y~vG~~dg~--~f~~~~~-----~~~~LD~G~DfYApQtf~~~-dgrri~igWmg~w~~~~~~PT~~~ 313 (486)
T COG1621 242 NGGEYDNIYQSGYFVGDFDGK--EFKLDDG-----QFRELDFGFDFYAPQTFLDP-DGRRILIGWMGNWDYTNNYPTIDE 313 (486)
T ss_pred CCCcCCCcceeEEEEEeeccc--eeEecCC-----CceecccCccccceeeccCC-CCCEEEEEeccCccccCCCCcccc
Confidence 43 35689999999986 5655542 367999999 9999999985 8999999999999986 566678
Q ss_pred CCccccccceEEEEecCCCeEEecchHHHHHhhhcceeccceEecCCcEEEEcccccceeeeEEEEEEcccccccc--cC
Q 010428 345 GWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQADVEISFDVSDFKKAEK--LD 422 (511)
Q Consensus 345 gW~g~lslPReL~l~~~g~~L~q~Pv~el~~LR~~~~~~~~~~~~~~~~~~~~~~~~~~~die~~~~l~~~~~~e~--~~ 422 (511)
||+|||||||||+|. +| +|+|+|++||++||.++....+..+++. ..+....+.+.++++.+... + +.. +.
T Consensus 314 ~w~~~mTlpRel~l~-~~-~L~Q~Pi~~l~~lr~~~~~~~~~~~~~~--~~l~~~~~~~~~l~~~~~~~--~-~~~~~~~ 386 (486)
T COG1621 314 GWRGAMTLPRELTLE-DG-KLYQTPVRELESLRKPEEAAHNTTLSGN--SKLELPSGDAYELDLDLIWT--D-ATSFGLE 386 (486)
T ss_pred CcCccceeeEEEEEc-CC-eEEecchHHHHhhhcccccccccccccc--eeeeccCCccEEEEEEeecc--c-cceEEEE
Confidence 999999999999996 46 6999999999999999766666666554 22333333444433222111 0 100 00
Q ss_pred CCc--------cCccccccccCCcccCCcccceeEEeecCCCceeeEEEEEEEeCCCCcEEEEEecCC-CCccCcccc
Q 010428 423 PGW--------TNPQLLCSQKGASVKGALGPFGLLALASKDLKEYTAVFFRIFKGEDNKFVVLMCSDQ-SRSLQFFSF 491 (511)
Q Consensus 423 ~~~--------~~~~~~~~~~~~~~~~~~g~~Gl~v~~s~~~~E~t~i~f~~~~~~~~~~~~~~~~d~-~~Ss~~~~~ 491 (511)
++. .....++..+..+ ..-...+|-...+ .+.....|..+|+.+. ++.++|++.++ +.|+..+..
T Consensus 387 l~~~~~~~~~~~~~~~l~ldR~~s-~~f~~~~~~~r~~--~~~~~~~v~l~if~D~-ssvEiF~NdGe~v~T~rifp~ 460 (486)
T COG1621 387 LRMGLNLVGYDVENETLTLDRSDS-PLFTVQDGETREC--FIENGAKVHLRIFVDN-SSVEIFINDGEKVFTSRIFPT 460 (486)
T ss_pred eecCcceeccccccceEEEecccc-ccccccCCceeee--ccCCCceEEEEEEEeC-CeEEEEEcCCceEEEEEecCC
Confidence 000 1122344444322 1112233322222 2233333778888887 89999998766 455555443
|
|
| >TIGR01322 scrB_fam sucrose-6-phosphate hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-80 Score=661.10 Aligned_cols=307 Identities=34% Similarity=0.612 Sum_probs=264.7
Q ss_pred CCCCCCCccccccCCCCCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCccCCCeE
Q 010428 40 SPNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCW 119 (511)
Q Consensus 40 ~~~~~~Rp~yHf~p~~gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D~~g~~ 119 (511)
..+++|||+|||+|+.||||||||++|++|+||||||++|+++.||+||||||+|+|||||+++|+||.|++.+|+.|||
T Consensus 8 ~~~~~~rp~~H~~p~~gw~nDPng~~~~~G~yHlfyq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~G~~ 87 (445)
T TIGR01322 8 ALQSEWRPTFHIQPQTGLLNDPNGLIYFKGEYHLFYQWFPFGPVHGLKSWGHYTSKDLVHWEDEGVALAPDDPYDSHGCY 87 (445)
T ss_pred hccCCcCccCccCCCcCCccCCCcceEECCEEEEEEccCCCCCccCceEEEEEECCCccccEECCccCcCCCcccCCceE
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEEcCCCceEEEEeccCC----CCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCC
Q 010428 120 SGSATILPGEKPAIFYTGIDP----HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPD 195 (511)
Q Consensus 120 SGsav~~~dg~~~l~YTg~~~----~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~ 195 (511)
||||++ .+|+++|||||+.. .+.+.|++|+|+|+ .+|+|.. +|||.++ +.....+||||+| |+ .+
T Consensus 88 sGsav~-~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg-----~~~~k~~-~pvi~~~--~~~~~~~fRDP~V-~~-~~ 156 (445)
T TIGR01322 88 SGSAVD-NNGQLTLMYTGNVRDSDWNRESYQCLATMDDD-----GHFEKFG-IVVIELP--PAGYTAHFRDPKV-WK-HN 156 (445)
T ss_pred ECeEEe-eCCEEEEEEeccccCCCCCeeEEEEEEEcCCC-----CeEEECC-CceEeCC--CCCCcCcCCCCcE-Ee-EC
Confidence 999987 58999999999743 24678999999885 6899974 5999754 3333578999995 65 47
Q ss_pred CeEEEEEeeec-CCccEEEEEEcCCCCCcEEcccccccC----C-CCCceecCceEEeccCCCCCccccCCCCCceeEEE
Q 010428 196 KRWRVIIGSKI-NRKGLAILYRSKDFVHWIKAKHPLHSV----K-GTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLK 269 (511)
Q Consensus 196 g~w~m~~ga~~-~~~G~i~ly~S~Dl~~W~~~~~~l~~~----~-~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~ 269 (511)
|+|||++|++. +..|++++|+|+||++|++.+.+.... . .+.||||||||+|+ | ||||+
T Consensus 157 g~~~M~~g~~~~~~~g~i~ly~S~Dl~~W~~~g~~~~~~~~~~~~~g~~~ECPdlf~l~--~-------------k~vL~ 221 (445)
T TIGR01322 157 GHWYMVIGAQTETEKGSILLYRSKDLKNWTFVGEILGDGQNGLDDRGYMWECPDLFSLD--G-------------QDVLL 221 (445)
T ss_pred CEEEEEEEEecCCCceEEEEEECCCcccCeEecccccccccccCCccceEECCeEEEEC--C-------------cEEEE
Confidence 89999999986 456899999999999999987554332 2 34599999999998 5 88888
Q ss_pred EeeCCC----------ceeEEEEEEEeCCCCeeecCCCCcCCCCccccccCC-CccceeeecCCCCcEEEEEeccCCCCC
Q 010428 270 VSLDDT----------KHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSV 338 (511)
Q Consensus 270 ~S~~~~----------~~~~Y~iG~~d~~~~~F~p~~~~~d~~~~~~lD~G~-fYA~qtf~d~~~grril~gW~~~~~~~ 338 (511)
+|..+. ..+.|++|+||.++.+|+|++. ..++|+|+ |||+|||.++ +||||+||||++++..
T Consensus 222 ~s~~g~~~~~~~~~~~~~~~Y~vG~~d~~~~~f~~~~~------~~~lD~G~dfYA~qtf~~~-~gr~i~~gW~~~~~~~ 294 (445)
T TIGR01322 222 FSPQGLDASGYDYQNIYQNGYIVGQLDYEAPEFTHGTE------FHELDYGFDFYAPQTFLAP-DGRRILVAWMGLPEID 294 (445)
T ss_pred EeccccCcccccccccccceeEEEEEECCCCEEecCCC------CceeccCcCceeeeeEECC-CCCEEEEEeCCCCccC
Confidence 886431 1367999999988889987642 46899998 9999999985 7999999999999876
Q ss_pred CCCCCCCCccccccceEEEEecCCCeEEecchHHHHHhhhcce
Q 010428 339 NDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLRVNQV 381 (511)
Q Consensus 339 ~~~~~~gW~g~lslPReL~l~~~g~~L~q~Pv~el~~LR~~~~ 381 (511)
.++.+.||+|+|||||+|+|+ +| +|+|+||+||++||.+..
T Consensus 295 ~~~~~~~W~g~lslpR~l~l~-~g-~L~~~Pv~el~~lr~~~~ 335 (445)
T TIGR01322 295 YPTDRDGWAHCMTLPRELTLK-DG-KLVQTPLRELKALRTEEH 335 (445)
T ss_pred CCCccCCcccccccCEEEEEe-CC-eEEEEEhHHHHHHhcCcc
Confidence 666778999999999999997 57 699999999999998654
|
|
| >smart00640 Glyco_32 Glycosyl hydrolases family 32 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-79 Score=654.31 Aligned_cols=382 Identities=47% Similarity=0.861 Sum_probs=297.0
Q ss_pred cccCCCCCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCccCCCeEeeeEEEcCCC
Q 010428 50 HFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGE 129 (511)
Q Consensus 50 Hf~p~~gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D~~g~~SGsav~~~dg 129 (511)
||+|+.||||||||++|++|+|||||||+|.++.||+++||||+|+|||||+++++||.|+.++|+.|||||||+++ +|
T Consensus 1 H~~p~~gw~NDPnGl~~~~G~yHlFyq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~aL~P~~~~d~~g~~sGsav~~-~~ 79 (437)
T smart00640 1 HFQPPKGWMNDPNGLIYYKGKYHLFYQYNPFGPVWGNIHWGHAVSKDLVHWTHLPVALAPDEWYDSNGVFSGSAVID-PG 79 (437)
T ss_pred CCCCCcCccCCCCeeeEECCEEEEEEecCCCCCCCCCeEEEEEEcCCcceeeecCcccCCCCcCCCCcEEEEEEEEC-CC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999875 77
Q ss_pred ceEEEEeccCCC------CcceE-EEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEE
Q 010428 130 KPAIFYTGIDPH------NRQVQ-NLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVII 202 (511)
Q Consensus 130 ~~~l~YTg~~~~------~~q~q-~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ 202 (511)
+++|||||+... ..+.| +.|.++| +++|+|+++||||.++ +++...+||||+|+|. ++|+|||++
T Consensus 80 ~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d-----~~~w~k~~~~Pvi~~~--p~~~~~~fRDP~Vf~~-~~~~~~m~~ 151 (437)
T smart00640 80 NLSLLYTGNVAIDTNVQVQRQAQQLAASDDL-----GGTWTKYPGNPVLVPP--PGIGTEHFRDPKVFWY-DGDKWYMVI 151 (437)
T ss_pred ceEEEEcCCcccccccCcccEEEEEEEECCC-----CCeeEECCCCcEEeCC--CCCCCCCcCCCCccEE-CCCEEEEEE
Confidence 799999997421 12333 4454444 3899999889999765 5556789999998776 447999999
Q ss_pred eeec-CCccEEEEEEcCCCCCcEEccccccc--CCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCCCceeE
Q 010428 203 GSKI-NRKGLAILYRSKDFVHWIKAKHPLHS--VKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEY 279 (511)
Q Consensus 203 ga~~-~~~G~i~ly~S~Dl~~W~~~~~~l~~--~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~~~~~~ 279 (511)
|++. ++.|+|++|+|+||++|++.+.++.. ...++||||||||+|+.+| ...||||++|..+.....
T Consensus 152 g~~~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~g~~wECPdlf~l~~~~----------~~~~~vLi~s~~g~~~~~ 221 (437)
T smart00640 152 GASDEDKTGIALLYRSTDLKNWTLLGELLHSGVGDTGGMWECPDLFPLPGDG----------DTSKHVLKVSPQGGSGNY 221 (437)
T ss_pred EEEecCCCeEEEEEECCCcccCeECCcccccCCCCccceEECCcEEEeCCCC----------CceeEEEEECcCCCCccE
Confidence 9876 45799999999999999998765543 2234799999999998443 235999999998767789
Q ss_pred EEEEEEeCCCCeeecCCCCcCCCCccccccCC-CccceeeecCCCCcEEEEEeccCCCCCC-CCCCCCCccccccceEEE
Q 010428 280 YTVGTYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSVN-DDVKKGWAGIQAIPRKLW 357 (511)
Q Consensus 280 Y~iG~~d~~~~~F~p~~~~~d~~~~~~lD~G~-fYA~qtf~d~~~grril~gW~~~~~~~~-~~~~~gW~g~lslPReL~ 357 (511)
|++|.++++ .+|+|+.... .....++|+|+ |||||||.++..+|||+||||++++... .....||+|+|||||||+
T Consensus 222 y~~G~~~g~-~~f~~~~~~~-~~~~~~lD~G~dfYA~qt~~~~~~~r~i~~gW~~~~~~~~~~~p~~~W~g~~tlPRel~ 299 (437)
T smart00640 222 YFVGYFDGS-DQFTPDDPED-VGIGLRLDYGFDFYASQTFYDPDGNRRILIGWMGEWDSYADDVPTKGWAGALSLPRELT 299 (437)
T ss_pred EEEEEEcCc-eeEeECCccc-cCccceEecCCCceeeeeeecCCCCcEEEEEecCCCccccccCCCCCccccceeCeEEE
Confidence 999999863 5798876431 12345899998 9999999986456999999999997422 222389999999999999
Q ss_pred Ee-cCCCeEEecchHHHHHhhhcceeccceEecCCcEEEEcc--cccceeeeEEEEEEcccccccccCCCccCccccccc
Q 010428 358 LD-KSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTG--VTAAQADVEISFDVSDFKKAEKLDPGWTNPQLLCSQ 434 (511)
Q Consensus 358 l~-~~g~~L~q~Pv~el~~LR~~~~~~~~~~~~~~~~~~~~~--~~~~~~die~~~~l~~~~~~e~~~~~~~~~~~~~~~ 434 (511)
|+ ++| +|+|+||+||++||... ......+..+....+.. ..+.+++|+++|+...
T Consensus 300 l~~~~g-~L~~~Pv~el~~lr~~~-~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~-------------------- 357 (437)
T smart00640 300 LDKTGG-KLLQWPVEELESLRNVK-ELSNLTLKPGSVNELLGLTASGDAYEIELSFEVDS-------------------- 357 (437)
T ss_pred EEecCC-EEEEeecHHHHhhhCcc-cccceeecCCceeeeecccCCccEEEEEEEEEeCC--------------------
Confidence 96 556 69999999999999542 23333343332222221 2344455555544310
Q ss_pred cCCcccCCcccceeEEeecCCCceeeEEEEEEEeCCCCcEEEEEecCCCCccC
Q 010428 435 KGASVKGALGPFGLLALASKDLKEYTAVFFRIFKGEDNKFVVLMCSDQSRSLQ 487 (511)
Q Consensus 435 ~~~~~~~~~g~~Gl~v~~s~~~~E~t~i~f~~~~~~~~~~~~~~~~d~~~Ss~ 487 (511)
....+||+.+.++++.+|.|.|.|+..... +++||++|..
T Consensus 358 ------~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~-------l~vdR~~~~~ 397 (437)
T smart00640 358 ------GGAGPFGLLVLASEDLSEQTAVYFDVSKGT-------LCLDRRSSGT 397 (437)
T ss_pred ------CcceeEEEEEEeCCCCCceEEEEEEcCCeE-------EEEecCCCCC
Confidence 001369999999999999999999865321 5668866653
|
|
| >PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure [] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-78 Score=614.81 Aligned_cols=300 Identities=42% Similarity=0.834 Sum_probs=247.8
Q ss_pred cccCCCCCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCccCCCeEeeeEEEcCCC
Q 010428 50 HFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGE 129 (511)
Q Consensus 50 Hf~p~~gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D~~g~~SGsav~~~dg 129 (511)
||+|+.||||||||++|++|+|||||||||+++.||+++||||+|+|||||+++++||.|++.+|+.|||||||+++ ++
T Consensus 1 H~~p~~gw~NDPnG~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~~~aL~P~~~~d~~g~~SGs~~~~-~~ 79 (308)
T PF00251_consen 1 HFTPPKGWMNDPNGLVYYDGKYHLFYQYNPFGPEWGNMHWGHATSKDLVHWEHLPVALPPDEEYDADGCFSGSAVVD-DD 79 (308)
T ss_dssp SBB-SSEEEEEEEEEEEETTEEEEEEEEETTSSSS-SBEEEEEEESSSSSEEEEEEEE-SSSGGGTTEEEEEEEEEE-TT
T ss_pred CCCCCCCCeECCccCeEeCCEEEEEeccCCCCcccceeEEEEEECCCCCCceeCCceEcccccCCcCccCcceEEEE-CC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999986 66
Q ss_pred ceEEEEeccCCCCcceEEEEEecCCCCcccceeeecC-CCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCC
Q 010428 130 KPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSP-KNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINR 208 (511)
Q Consensus 130 ~~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~-~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~ 208 (511)
+++|||||+.....|.|++|+|.|.+ ++|+|++ +||||..+. ++ ...+||||+|+|. ++++|+|++|++...
T Consensus 80 ~~~~~YTg~~~~~~~~q~~A~s~d~~----~~w~k~~~~~pvi~~~p-~~-~~~~~RDP~v~~~-~~~~~~m~~g~~~~~ 152 (308)
T PF00251_consen 80 NLVLFYTGNNRDGKQVQCLAYSTDDG----ITWTKYPQGNPVIPEPP-PG-DTTDFRDPKVFWR-EDGRWYMLLGAGRDG 152 (308)
T ss_dssp CEEEEEEEEETTTEEEEEEEEESSTT----SSEEE-TTTCESBESSS-TT-SCTSEEEEEEEEE-CTTEEEEEEEEEETT
T ss_pred EEEEEEeccCCCCCeEEEEEEECCCC----CceEEcCCCCcEEEecc-cC-CCCccccCeEEEe-cCCEEEEEEeccccC
Confidence 89999999977568999999996643 8999998 499997530 33 6789999998798 569999999999888
Q ss_pred ccEEEEEEcCCCCCcEEcccccccCC-CCCceecCceEEeccCCCCCccccCCCCCceeEEEEee----CCCceeEEEEE
Q 010428 209 KGLAILYRSKDFVHWIKAKHPLHSVK-GTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSL----DDTKHEYYTVG 283 (511)
Q Consensus 209 ~G~i~ly~S~Dl~~W~~~~~~l~~~~-~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~----~~~~~~~Y~iG 283 (511)
.|+|++|+|+||++|++.+.+..... .++||||||||+|+..+. + ....+|||++|. .....+.|+||
T Consensus 153 ~g~i~~y~S~Dl~~W~~~~~l~~~~~~~g~~~ECPdlf~l~~~~~-~------~~~~~~vl~~s~~g~~~~~~~~~Y~vG 225 (308)
T PF00251_consen 153 RGCILLYTSDDLIHWEYLGPLFIPGDNGGGMWECPDLFPLDGKGD-G------TGKWVWVLIFSPQGIEDNGHGTYYMVG 225 (308)
T ss_dssp EEEEEEEEESSSSSEEEEEEESEEETTTSSEEEEEEEEEEEBTTS-S------SEEEEEEEEEEEESTTTTTTEEEEEEE
T ss_pred cceEEEEEcCCcccCceeCcccccccccccccccceEEEECCccc-c------cceEEEEEEecccccccccccceEEeE
Confidence 89999999999999999876554433 467999999999994410 0 112367899998 34578999999
Q ss_pred EEeCCCCeeecCCCCcCCCCccccccCC-CccceeeecCCCCcEEEEEeccCCCCCCCC-CCCCCccccccceEEEEecC
Q 010428 284 TYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSVNDD-VKKGWAGIQAIPRKLWLDKS 361 (511)
Q Consensus 284 ~~d~~~~~F~p~~~~~d~~~~~~lD~G~-fYA~qtf~d~~~grril~gW~~~~~~~~~~-~~~gW~g~lslPReL~l~~~ 361 (511)
++|..+.+|+++. ....++|+|+ |||+|||.++.++|||+||||++++..... .+.||+|+|||||||+|+++
T Consensus 226 ~~d~~~~~f~~~~-----~~~~~lD~G~dfYA~qtf~~~~~~r~i~~gW~~~~~~~~~~~~~~gW~g~lslPR~l~l~~~ 300 (308)
T PF00251_consen 226 DFDFDGGTFTPDD-----SSFQRLDYGFDFYAPQTFYDPDGGRRILIGWMGEWDYNADDYPTYGWAGCLSLPRELTLKDE 300 (308)
T ss_dssp EEETTTTEEEESS-----TTSEESBSSSS-EEEEEEEETTTTEEEEEEEES-TTTHHHHCHGHTEE-EE---EEEEEETT
T ss_pred EecCCCCeeeeec-----cccceeccCccccCCchhcCCCcCcEEEEEEecCCCcccccCCCCCCccEEEeCEEEEEEEC
Confidence 9987788998762 1268999999 999999999755599999999999875322 26899999999999999864
Q ss_pred CCeEEecc
Q 010428 362 GKHLVQWP 369 (511)
Q Consensus 362 g~~L~q~P 369 (511)
+.+|+|+|
T Consensus 301 ~~~L~q~P 308 (308)
T PF00251_consen 301 GGRLYQKP 308 (308)
T ss_dssp SSSEEEEE
T ss_pred CCeEEEcC
Confidence 55799998
|
; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A .... |
| >cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-68 Score=543.87 Aligned_cols=286 Identities=40% Similarity=0.726 Sum_probs=245.0
Q ss_pred CCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEEE
Q 010428 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFY 135 (511)
Q Consensus 56 gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~l~Y 135 (511)
||||||||++|++|+||||||++|.++.||+++||||+|+|||||+++++||.|+..+|..|||||||+++.+|+++|||
T Consensus 1 gw~nDPng~~~~~G~yhlfyq~~p~~~~~~~~~wgha~S~Dlv~W~~~~~al~p~~~~d~~g~~sGsav~~~~g~~~~~Y 80 (298)
T cd08996 1 GWMNDPNGLVYFNGKYHLFYQYNPFGPVWGNMHWGHATSKDLVHWEHLPVALAPDDPYDSGGCFSGSAVVDDNGKLVLFY 80 (298)
T ss_pred CCcccCCeeeEECCEEEEEEcCCCCCCCCCCcEEEEEEecCccceeECCcccCCCCcccCCeEEeCeEEEcCCCcEEEEE
Confidence 89999999999999999999999999999999999999999999999999999988899999999999986449999999
Q ss_pred eccCC---CCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeec-CCccE
Q 010428 136 TGIDP---HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-NRKGL 211 (511)
Q Consensus 136 Tg~~~---~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~-~~~G~ 211 (511)
||+.. ...+.|++|+|+|. +++|+|...+|++.++ .....+||||+|++. +|+|||++|++. +..|+
T Consensus 81 Tg~~~~~~~~~~~~~lA~S~dd----g~~w~k~~~~~~~~~~---~~~~~~~RDP~V~~~--~g~~~m~~g~~~~~~~~~ 151 (298)
T cd08996 81 TGNVKLDGGRRQTQCLAYSTDD----GRTFTKYEGNPVIPPP---DGYTTHFRDPKVFWH--DGKWYMVLGAGTEDGTGR 151 (298)
T ss_pred eceeCCCCCceEEEEEEEEcCC----CCEEEECCCCceEcCC---CCCCCcccCCeEEeE--CCEEEEEEEEEecCCCcE
Confidence 99864 46789999999853 3899999889988632 335678999997554 599999999986 35789
Q ss_pred EEEEEcCCCCCcEEccccc-ccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCCC------ceeEEEEEE
Q 010428 212 AILYRSKDFVHWIKAKHPL-HSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDT------KHEYYTVGT 284 (511)
Q Consensus 212 i~ly~S~Dl~~W~~~~~~l-~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~~------~~~~Y~iG~ 284 (511)
|.+|+|+||++|++.+.+. .......|||||+||++++. .||||++|.... ..+.|++|+
T Consensus 152 i~ly~S~Dl~~W~~~~~~~~~~~~~~~~~EcP~l~~l~~~-------------~k~vL~~s~~~~~~~~~~~~~~y~~G~ 218 (298)
T cd08996 152 ILLYRSDDLKNWEYLGELLTSLGDFGYMWECPDLFPLDVE-------------GKWVLIFSPQGLEPEGNGSGTGYLVGD 218 (298)
T ss_pred EEEEECCCCCCCEEcceecccCCCccceEeCCcEEEECCC-------------CeEEEEECCCCCCCCCCccceEEEEEE
Confidence 9999999999999876542 23344679999999999842 299999997643 457999999
Q ss_pred EeCCCCeeecCCCCcCCCCccccccCC-CccceeeecCCCCcEEEEEeccCCCCCCCCCCCCCccccccceEEEEecCCC
Q 010428 285 YSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSGK 363 (511)
Q Consensus 285 ~d~~~~~F~p~~~~~d~~~~~~lD~G~-fYA~qtf~d~~~grril~gW~~~~~~~~~~~~~gW~g~lslPReL~l~~~g~ 363 (511)
+++. .|+++. ....++|+|+ |||+|+|.++ ++|||+||||++++...+..+.||+|+|||||||+|++++
T Consensus 219 ~~~~--~~~~~~-----~~~~~lD~G~dfYA~q~~~~~-~~r~i~~gW~~~~~~~~~~~~~~w~g~ls~pr~l~l~~~~- 289 (298)
T cd08996 219 FDGT--TFTFDH-----TEFGELDYGFDFYAPQTFVDP-DGRRILIGWMGNWDYEYPTPEDGWAGCLTLPRELSLKDGG- 289 (298)
T ss_pred EECC--CCeEec-----CCceEecCCCCeEeCceeeCC-CCCEEEEEEecCCCcCCCCCCCCceeeeEeCEEEEEccCC-
Confidence 9975 555431 1257899998 9999999986 8999999999999887777889999999999999999765
Q ss_pred eEEecchHH
Q 010428 364 HLVQWPVVE 372 (511)
Q Consensus 364 ~L~q~Pv~e 372 (511)
+|.|+||+|
T Consensus 290 ~l~~~P~~e 298 (298)
T cd08996 290 RLYQRPVRE 298 (298)
T ss_pred EEEEEeCCC
Confidence 799999976
|
Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal |
| >cd08995 GH32_Aec43_like Glycosyl hydrolase family 32 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-56 Score=452.25 Aligned_cols=267 Identities=28% Similarity=0.480 Sum_probs=222.4
Q ss_pred cCCcceEEECCEEEEEeeeCCCCCCC--CCcEEEEEEeCCCCcceecCCCCCC-CCCccCCCeEeeeEEEcCCCceEEEE
Q 010428 59 NDPNGVMIYKGIYHLFYQYNPKGAVW--GNIVWAHSTSKDLINWIPHDPAIYP-SQQSDINGCWSGSATILPGEKPAIFY 135 (511)
Q Consensus 59 NDPnG~~~~~G~YHLFYQ~~P~~~~~--g~~~WgHa~S~DLvhW~~~~~aL~P-~~~~D~~g~~SGsav~~~dg~~~l~Y 135 (511)
.|| .++|++|+||||||++|.+..| ++++||||+|+||+||+++++||.| +..+|..|||||||++ .+|+++|||
T Consensus 1 ~d~-~~~~~~G~yhlfyq~~p~~~~~~~~~~~wgha~S~Dlv~W~~~~~al~~~~~~~d~~g~~sgs~~~-~~g~~~l~Y 78 (280)
T cd08995 1 GDP-MPFYDDGTFHIFYLHDPRNGPPEGLRHPWSLLTTKDLVNYEDHGEAIPRGGDEDDDDAIGTGSVIK-GEGTYHAFY 78 (280)
T ss_pred CCc-cceEECCEEEEEEEcCCCCCCcccCCceEEEEEccCcCccEECcceecCCCCcccccCceEeEEEe-eCCEEEEEE
Confidence 488 7999999999999999999888 8999999999999999999999988 4567889999999987 489999999
Q ss_pred eccCC--CCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeec-----CC
Q 010428 136 TGIDP--HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-----NR 208 (511)
Q Consensus 136 Tg~~~--~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~-----~~ 208 (511)
||+.. ...+.|++|+|+|+ ++|+|.+.+||+.++ +++...+||||+|+|.+++|+|||++|++. +.
T Consensus 79 Tg~~~~~~~~~~i~~A~S~D~-----~~w~k~~~~pv~~~~--~~~~~~~~rDP~Vf~~~~~g~y~m~~g~~~~~~~~~~ 151 (280)
T cd08995 79 TGHNLDGKPKQVVMHATSDDL-----ITWTKDPEFILIADG--EGYEKNDWRDPFVFWNEEEGCYWMLLATRLLDGPYNR 151 (280)
T ss_pred EEECCCCCCcEEEEEEECCCC-----CccEECCCCeecCCc--cccccCCccCCcEEEcCCCCeEEEEEEeccCCCCCCC
Confidence 99764 25678999999874 799998888998744 555667899999766544799999999875 35
Q ss_pred ccEEEEEEcCCCCCcEEcccccccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCC-CceeEEEEEEEeC
Q 010428 209 KGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD-TKHEYYTVGTYST 287 (511)
Q Consensus 209 ~G~i~ly~S~Dl~~W~~~~~~l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~-~~~~~Y~iG~~d~ 287 (511)
.|+|.+|+|+||++|++.+ ++.......|||||++|+++ | +|||++|.+. .....|++|+-.
T Consensus 152 ~g~i~~~~S~Dl~~W~~~~-~~~~~~~~~~~E~P~l~~~~--g-------------~~~L~~s~~~~~~~~~Y~~~~~~- 214 (280)
T cd08995 152 RGCIALFTSKDLKNWEYEE-PFYAPGLYFMPECPDLFKMG--D-------------WWYLVYSEFSENRKTHYRVSKSP- 214 (280)
T ss_pred CeEEEEEEeCCcCcceecC-ceecCCCcceeecceEEEEC--C-------------EEEEEEEeccCCCcEEEEEeCCC-
Confidence 6899999999999999875 45444445699999999998 5 9999999763 346789999622
Q ss_pred CCCeeecCCCCcCCCCccccccCC-CccceeeecCCCCcEEEEEeccCCCCCCCCCCCCCccccccceEEEEecCCC
Q 010428 288 AKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSGK 363 (511)
Q Consensus 288 ~~~~F~p~~~~~d~~~~~~lD~G~-fYA~qtf~d~~~grril~gW~~~~~~~~~~~~~gW~g~lslPReL~l~~~g~ 363 (511)
.+.|.... ...+| |+ |||||||.++ |||||||||++++...++.+.||+|+|| ||+|.+.+||.
T Consensus 215 -~g~~~~~~-------~~~~d-g~dfYA~~~~~~~--~r~i~~gw~~~~~~~~~~~~~~w~~~l~-~~~~~~~~~g~ 279 (280)
T cd08995 215 -FGPWRAPD-------DDTFD-GRAFYAAKTASDG--TRRFLFGWVPTKAGNDDDGNWEWGGNLV-VHELIQNEDGT 279 (280)
T ss_pred -CCCeEcCC-------cCccC-cccccceeEEEeC--CeEEEEEEecCCCCcccccCCccceEEE-eeEEEECCCCc
Confidence 34564322 23589 88 9999999985 9999999999999877888899999998 67788887774
|
This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a |
| >cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-39 Score=321.81 Aligned_cols=242 Identities=27% Similarity=0.399 Sum_probs=192.1
Q ss_pred CCcceEEECCEEEEEeeeCCCCCCCC-CcEEEEEEeCCCCcceecCCCC--CCCCCccCCCeEeeeEEEcCCCceEEEEe
Q 010428 60 DPNGVMIYKGIYHLFYQYNPKGAVWG-NIVWAHSTSKDLINWIPHDPAI--YPSQQSDINGCWSGSATILPGEKPAIFYT 136 (511)
Q Consensus 60 DPnG~~~~~G~YHLFYQ~~P~~~~~g-~~~WgHa~S~DLvhW~~~~~aL--~P~~~~D~~g~~SGsav~~~dg~~~l~YT 136 (511)
||+.+. |+||||||++|.+..++ ..+||||+|+||+||++.+.+| .|...+|..+||+|+++...+|+++|+||
T Consensus 8 ~~~~~~---g~yhlfy~~~~~~~~~~~~~~~~~a~S~D~~~w~~~~~~l~~~~~~~~~~~~~~~p~v~~~~dg~~~~~Yt 84 (276)
T cd08979 8 NPAVVV---GKYHLFYLAAPRGGGDGNTSRIGAASSDDGTWWTRPPAPLPPGPPGSFDDGGVWTPSVVRDPDGTYRMFYT 84 (276)
T ss_pred CCceEe---eeEEEEEEccCcCcCCCCcceeEEEEcCCCCccEECCcCccCCCCCchhcCCeEcceEEEcCCCeEEEEEe
Confidence 565443 89999999999987654 4568999999999999999887 56678889999999999864499999999
Q ss_pred ccCC--CCcceEEEEEecCCCCcccceeeecCCCcee-----cCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeec-CC
Q 010428 137 GIDP--HNRQVQNLAVPKNLSDPYLREWVKSPKNPLM-----APDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-NR 208 (511)
Q Consensus 137 g~~~--~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi-----~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~-~~ 208 (511)
+... ...+.|++|+|+|+ ++|+|.+.+|++ ..+ ......++|||+|++.+.+|+|+|++++.. +.
T Consensus 85 ~~~~~~~~~~~i~~A~S~D~-----~~w~~~~~~~~~~~~~~~~~--~~~~~~~~~dP~v~~~~~~g~y~m~~~~~~~~~ 157 (276)
T cd08979 85 GYDRPKGAVQRIGLATSKDL-----IHWTKHGPNPVPRWYESGNP--GPWDDHAWRDPAVVRDEEGGGWRMYYGARDADE 157 (276)
T ss_pred cccCCCCCcceEEEEECCCC-----CceEECCCCcceeeeecCCC--CCcccccccccEEEEECCCCEEEEEEEeEccCC
Confidence 9863 46788999999885 799998777753 122 233456899999765533399999999875 34
Q ss_pred ccEEEEEEcCCCCCcEEcccc--cccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCC-CceeEEEEEEE
Q 010428 209 KGLAILYRSKDFVHWIKAKHP--LHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD-TKHEYYTVGTY 285 (511)
Q Consensus 209 ~G~i~ly~S~Dl~~W~~~~~~--l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~-~~~~~Y~iG~~ 285 (511)
.++|.+|+|+|+++|++.+.. ........+||||++|+++ | +|+|+++... .....|.+|..
T Consensus 158 ~~~i~~a~S~D~~~W~~~~~~~~~~~~~~~~~~e~P~~~~~~--g-------------~~~l~~~~~~~~~~~~y~vg~~ 222 (276)
T cd08979 158 RGAIGLATSPDLIHWTPVPPPPGPRTGYDDGQLEVPQVVKID--G-------------RWYLLYSGRNEDAKTGYRVGTA 222 (276)
T ss_pred CcEEEEEECCCCCcceECCCCCCCCCcccCCcCccceEEEEC--C-------------EEEEEEEecCccCCccEEEEec
Confidence 688999999999999987653 1222345699999999997 5 9999998764 45678999987
Q ss_pred eCCCCeeecCCCCcCCCCccccccCC-CccceeeecCCCCcEEEEEeccCC
Q 010428 286 STAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNES 335 (511)
Q Consensus 286 d~~~~~F~p~~~~~d~~~~~~lD~G~-fYA~qtf~d~~~grril~gW~~~~ 335 (511)
+.. .|.|.. ...+|.|. |||+|++.+.+++||+++|||+++
T Consensus 223 ~~~--~~~~~~-------~~~~~~g~~~ya~~~~~~~~~~~~~~~gw~~~~ 264 (276)
T cd08979 223 LFG--PGRPLT-------LAELLDRTDLYAARPVPDGEGGGVVLEGFVQFG 264 (276)
T ss_pred ccC--Cccccc-------cccccCCCCceeEEeccccCCCcEEEEEEeecc
Confidence 653 455542 35799999 999999987557999999999986
|
This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta |
| >cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-37 Score=305.86 Aligned_cols=270 Identities=29% Similarity=0.447 Sum_probs=205.9
Q ss_pred cCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCC----CCCCccCCCeEeeeEEEcCCCceEEE
Q 010428 59 NDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIY----PSQQSDINGCWSGSATILPGEKPAIF 134 (511)
Q Consensus 59 NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~----P~~~~D~~g~~SGsav~~~dg~~~l~ 134 (511)
|||| +++++|+||||||++|.+ +.++|+|++|+||+||++++.+|. |...++..++|+|+++...+|+++|+
T Consensus 1 ~DP~-i~~~~g~yyl~~~~~~~~---~~~~~~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~wap~v~~~~~g~~~l~ 76 (286)
T cd08772 1 ADPN-LIKYNGTYYIFFSGDDKN---GNPGIAHATSKDLVNWTDHPVALVWWARRGGPKDSGGIWAPSIVYIENGKFYLY 76 (286)
T ss_pred CCCe-EEEECCEEEEEEEccCCC---CCceEEEEECCCcCcceECCccchhhcccCCCCCCCcEecceEEEcCCCCEEEE
Confidence 7999 999999999999999875 678999999999999999998884 67777889999999998644999999
Q ss_pred EeccCC-CCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeec-CCccEE
Q 010428 135 YTGIDP-HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-NRKGLA 212 (511)
Q Consensus 135 YTg~~~-~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~-~~~G~i 212 (511)
||+... ...+.+++|+|+|.. ..|++...+||+.... .......+|||+|+ .+++|+|||++++.. ...+.|
T Consensus 77 yt~~~~~~~~~~i~~a~s~d~~----~~~~~~~~~~~~~~~~-~~~~~~~~~Dp~v~-~d~dG~~y~~~~~~~~~~~~~i 150 (286)
T cd08772 77 YTDVSFTKNQQTIGVATAEDGN----GPWTDYIGGPVLPDNP-PAADVSNFRDPFVF-EDDDGKWYLVFGSGDHHNFGGI 150 (286)
T ss_pred EEeecCCCCceeEEEEEcCCCC----CCCccccccccccCCC-CccccccccCCeEE-EcCCCCEEEEEccccCCCCCeE
Confidence 999753 356789999998864 3466655556664220 22344679999964 546699999999865 245779
Q ss_pred EEEEcCCCCCcEEcccc--cccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCC------CceeEEEEEE
Q 010428 213 ILYRSKDFVHWIKAKHP--LHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD------TKHEYYTVGT 284 (511)
Q Consensus 213 ~ly~S~Dl~~W~~~~~~--l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~------~~~~~Y~iG~ 284 (511)
.+++|+|+.+|+..+.. .......+++|||++|+++ | +|+|++|... .....|++++
T Consensus 151 ~~~~s~d~~~w~~~~~~~~~~~~~~~~~~E~P~~~~~~--g-------------~~yL~~s~~~~~~~~~~y~~~~~~~~ 215 (286)
T cd08772 151 FLYESDDDTTWKKGSAELLISEGEGGKQIEGPGLLKKN--G-------------KYYLFYSINGTGRVDSTYSIGYARSE 215 (286)
T ss_pred EEEEcCCCCCcccccceeeEeeccCCCceeccEEEEEC--C-------------EEEEEEEcCCCcCCCCCcceEEEEcc
Confidence 99999999999876543 1223346699999999997 6 8999998654 3456788886
Q ss_pred EeCCCCeeecCCCCc-CCCCccccccCC-CccceeeecCCCCcEEEEEeccCCCCCCCCCCCCCccccccceEEE
Q 010428 285 YSTAKDRYVPDEGSV-ESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLW 357 (511)
Q Consensus 285 ~d~~~~~F~p~~~~~-d~~~~~~lD~G~-fYA~qtf~d~~~grril~gW~~~~~~~~~~~~~gW~g~lslPReL~ 357 (511)
.+ .+.|++..... ........|.+. +||++.|.++ +||+++++|+.+++.... ...+|+++|+|||+++
T Consensus 216 ~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~r~~~ 286 (286)
T cd08772 216 SD--TGPYVPKSDTSGGLSLTGGNDGGVGPYHAAAFNDA-GGRVVLVYHAYNVQYADA-PTYGWGRSLAIPRLLW 286 (286)
T ss_pred CC--CCCcccCCCCCCccccccccCCCCCCCccEEEECC-CCCEEEEEEeccCCcccc-ccCCCccccccccccC
Confidence 43 35665543210 000123466777 9999999986 799999999999875333 5579999999999874
|
Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32 |
| >cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.8e-26 Score=234.42 Aligned_cols=271 Identities=20% Similarity=0.257 Sum_probs=172.1
Q ss_pred CCcceEE-ECCEEEEEeeeCCCC----CCCCCcEEEEEEeCCCCcceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEE
Q 010428 60 DPNGVMI-YKGIYHLFYQYNPKG----AVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIF 134 (511)
Q Consensus 60 DPnG~~~-~~G~YHLFYQ~~P~~----~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~l~ 134 (511)
|..|-+. ++|..-+|+...|.. +.|+.+||||++|+||+||++.+ +|.|++.+|..|||||||++..+|+++||
T Consensus 9 d~~g~~~~~~G~~~vfaL~a~~~~~~~~rh~~~~wgh~~S~dlv~W~~~~-~l~p~~~~d~~g~wSGsa~~~~dg~~~lf 87 (349)
T cd08997 9 DRDGEVASYNGYEVIFALTADRNLDPDDRHGDARIGYFYSRAGGNWIDGG-KVFPDGLSPGSREWSGSATLDDDGTVQLF 87 (349)
T ss_pred CCCCCEEEECCEEEEEEEecCCCCCCCCCcCceEEEEEEeCCCCcccCCC-ccCCCCcccCCCeEcceEEEeCCCeEEEE
Confidence 5556333 677755999988765 46889999999999999999955 57788899999999999998667999999
Q ss_pred EeccCC----CCcceEEEEEecCCCCcccceeeecC--CCceecCCC------------CCcCCCCCCCCCEEEEeCCCC
Q 010428 135 YTGIDP----HNRQVQNLAVPKNLSDPYLREWVKSP--KNPLMAPDA------------MNQINTSSFRDPTTAWLGPDK 196 (511)
Q Consensus 135 YTg~~~----~~~q~q~lA~s~d~~d~~l~~w~K~~--~nPVi~~p~------------~~~~~~~~fRDP~vvw~~~~g 196 (511)
|||+.+ .+...|++|.+.+.. +..|.+.. ..+++.++. .+.....+||||+|+..+++|
T Consensus 88 YTg~~~~~~~~~~~~Q~ia~a~~~~---~~v~~~~~~~~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~d~~~G 164 (349)
T cd08997 88 YTAVGRKGEPQPTFTQRLALARGTL---SVVNLSGFEDHHELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFEDPETG 164 (349)
T ss_pred EeccccCCCCCCCceEEEEEEECCC---cceEecccCccceeeeCCCceEEeccccccccccCccCcccCCEEEecCCCC
Confidence 999853 356788888776531 12333211 234443221 011235689999964432379
Q ss_pred eEEEEEeeecC-C---------------------------ccEEEEE--EcCCCCCcEEcccccccCC-CCCceecCceE
Q 010428 197 RWRVIIGSKIN-R---------------------------KGLAILY--RSKDFVHWIKAKHPLHSVK-GTGMWECPDFF 245 (511)
Q Consensus 197 ~w~m~~ga~~~-~---------------------------~G~i~ly--~S~Dl~~W~~~~~~l~~~~-~~g~wECPdlf 245 (511)
+|||+++++.. . .|+|.++ +|+|+.+|++.+ ||.... -...||||++|
T Consensus 165 ~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~dl~~W~~~~-PL~~a~~v~d~~E~P~v~ 243 (349)
T cd08997 165 KTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKNDDLTEWKLLP-PLLEANGVNDELERPHVV 243 (349)
T ss_pred cEEEEEEeccCCCCCccccccccccccccccccccccccccceEEEEEecCCCCCCcEEcC-ccccCCCcCCceEcceEE
Confidence 99999998762 2 2556555 678999999876 554433 24579999999
Q ss_pred EeccCCCCCccccCCCCCceeEEEEeeCCC---------ceeEEEEEEEeCCCCeeecCCCCcCCCCccccccC--CCcc
Q 010428 246 PVSTYGLNGLDTSDMGPNTKHVLKVSLDDT---------KHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYG--KYYA 314 (511)
Q Consensus 246 ~l~~~g~~g~~~s~~~~~~k~vL~~S~~~~---------~~~~Y~iG~~d~~~~~F~p~~~~~d~~~~~~lD~G--~fYA 314 (511)
+++ | ||+|+.|.... ...++++++ .-.+.|.|-+.. .+.+=.- .-|.
T Consensus 244 ~~~--g-------------k~yL~~s~~~~~~~~~~~~~~~~~g~vsd--sl~GP~~~~n~s-----glvl~~p~~~~~~ 301 (349)
T cd08997 244 FHN--G-------------KYYLFTISHRSTFAPGLSGPDGLYGFVSD--SLRGPYKPLNGS-----GLVLGNPTDAPFQ 301 (349)
T ss_pred EEC--C-------------EEEEEEeCCcCccccccCCCCcEEEEEeC--CCCCCCccCCCC-----cceeCCCCCCccc
Confidence 998 6 99999884322 123444553 122456554311 1111100 2333
Q ss_pred ceeeecCCCCcEEEEEeccCCCCCCCCCCCCCccccccceEEEEecC
Q 010428 315 SKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKS 361 (511)
Q Consensus 315 ~qtf~d~~~grril~gW~~~~~~~~~~~~~gW~g~lslPReL~l~~~ 361 (511)
+++.+--++ -++...|.+..... ......|.++-.-.|.|+.+
T Consensus 302 ~ys~~~~p~--~lv~Sfid~~~~~~--~~~~~~gT~aPt~~l~~~gd 344 (349)
T cd08997 302 TYSWYVMPN--GLVTSFIDNVGFAD--GGSRFGGTLAPTLKLNLKGD 344 (349)
T ss_pred cceEEEECC--CEEEEEecccCCcc--cccccCCeeCCeEEEEEcCC
Confidence 444433222 36666777665321 12456666655555666543
|
Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n |
| >cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.3e-23 Score=209.91 Aligned_cols=191 Identities=21% Similarity=0.317 Sum_probs=142.9
Q ss_pred ccccCCCCCccCCcceEEE-CCEEEEEeeeCCCCCC---C-CCcEEEEEEeCCCC-cceecCCCCCCC--CCccCCCeEe
Q 010428 49 YHFQPPKNWINDPNGVMIY-KGIYHLFYQYNPKGAV---W-GNIVWAHSTSKDLI-NWIPHDPAIYPS--QQSDINGCWS 120 (511)
Q Consensus 49 yHf~p~~gw~NDPnG~~~~-~G~YHLFYQ~~P~~~~---~-g~~~WgHa~S~DLv-hW~~~~~aL~P~--~~~D~~g~~S 120 (511)
.+|..+..++.+|. +++. +|+||||||..|.+.. | ....||||+|+|+. +|+..+++|.|+ ..||+.++++
T Consensus 4 ~~~~~~~~~~w~~~-vi~~~~g~y~lfy~~~~~~~~~~~~~~~~~i~~A~S~~~~g~w~~~g~vl~~~~~~~wd~~~~~~ 82 (291)
T cd08994 4 SGLEDEDYSVWGGS-IIKGPDGKYHLFASRWPEGLGFHGWLPYSEIVHAVSDTPEGPYTFQEVVLPGRGGGYWDARTTHN 82 (291)
T ss_pred ceeeeCCeEEEecc-eEECCCCcEEEEEEEccCCCCCCcccccceEEEEEcCCCCCCcEEeeeEcCCCCCCcccCCCccC
Confidence 46788889999995 6665 5899999999987643 2 23569999999987 899999999887 4689999999
Q ss_pred eeEEEcCCCceEEEEeccCC-------CCcceEEEEEecCCCCcccceeeecCCCceecCC------------------C
Q 010428 121 GSATILPGEKPAIFYTGIDP-------HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPD------------------A 175 (511)
Q Consensus 121 Gsav~~~dg~~~l~YTg~~~-------~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p------------------~ 175 (511)
++++.. +|+++|+||+... ...+.+++|+|++.. .+|++. .+|||.+. +
T Consensus 83 P~vi~~-~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~~----g~w~~~-~~pvl~~~~~~~~~~~~~~p~v~~~~~ 156 (291)
T cd08994 83 PTIKRF-DGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSLD----GPWKRS-DQPILEPRPGGWDNLITSNPAVTRRPD 156 (291)
T ss_pred CeEEEE-CCEEEEEEEcccCCcccccCCCCceEEEEEeCCCC----CCcEEC-CCceecCCCCccccccccCCCeEEeCC
Confidence 999874 7999999999753 235678888887642 367775 45665320 0
Q ss_pred C---------------------------C-c-------------CCCCCCCCCEEEEeCCCCeEEEEEeeecC----Ccc
Q 010428 176 M---------------------------N-Q-------------INTSSFRDPTTAWLGPDKRWRVIIGSKIN----RKG 210 (511)
Q Consensus 176 ~---------------------------~-~-------------~~~~~fRDP~vvw~~~~g~w~m~~ga~~~----~~G 210 (511)
. . + .....+|||+ ||+ ++|+|||+++++.+ ..+
T Consensus 157 g~~~m~y~g~~~~~~~~~~~~gla~s~d~~g~~~~~~~~~v~~~~~~~~~~dP~-V~~-~~g~yym~~~~~~~~~~~~~~ 234 (291)
T cd08994 157 GSYLLVYKGGTYNPTKGNRKYGVAIADSPTGPYTKVSGPPFIEPGDNGNTEDPF-VWY-DKGQFHMIVKDMLGYVTGEKG 234 (291)
T ss_pred CCEEEEEeccccCCCCCcEEEEEEEeCCCCCCCEECCCCccccCCCCCceeCce-EEE-eCCEEEEEEeecccCcCCCCc
Confidence 0 0 0 0123579999 577 56999999998753 468
Q ss_pred EEEEEEcCCCCCcEEccccccc-----CC----CCCceecCceE-Eec
Q 010428 211 LAILYRSKDFVHWIKAKHPLHS-----VK----GTGMWECPDFF-PVS 248 (511)
Q Consensus 211 ~i~ly~S~Dl~~W~~~~~~l~~-----~~----~~g~wECPdlf-~l~ 248 (511)
++.+|+|+|+++|++.+.++.. .+ ...|||||++| ..+
T Consensus 235 ~i~~a~S~Dg~~W~~~~~~~~~~~~~~~~~~~~~~~~~erP~v~~~~~ 282 (291)
T cd08994 235 GGAYFRSKDGIHWKLAPGLAYSTTVEWTDGTTEDWGRLERPQVLLDED 282 (291)
T ss_pred eEEEEECCCCCCceecCcceeeeeEEcCCCcccccccccCCEEEEcCC
Confidence 8999999999999998655321 11 35799999999 777
|
This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f |
| >cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.5e-20 Score=183.97 Aligned_cols=191 Identities=18% Similarity=0.263 Sum_probs=139.1
Q ss_pred CCCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCC-CCccCCCeEeeeEEEcCCCceEE
Q 010428 55 KNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPS-QQSDINGCWSGSATILPGEKPAI 133 (511)
Q Consensus 55 ~gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~-~~~D~~g~~SGsav~~~dg~~~l 133 (511)
.||++||+ +++++|+||||++..+.+. ....|.+++|+||+||+.++.+|.+. ..++..++|+++++. .+|+++|
T Consensus 5 ~g~~~DP~-i~~~~g~yY~~~t~~~~~~--~~~~~~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~wAP~v~~-~~g~yy~ 80 (275)
T cd09004 5 PGWYADPE-IRIFGGTYYIYPTSDGAGG--EQTPFDVFSSKDLVNWTKEGIILDMADVSWANRAAWAPSVIE-RNGKYYF 80 (275)
T ss_pred CCCCCCCC-eEEECCEEEEEEeccCCCC--CeeEEEEEECCCCCCceECcccccccCCcccCCCcCCCeEEE-ECCEEEE
Confidence 46899996 5789999999998765322 25689999999999999999998764 456678999999987 4899999
Q ss_pred EEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCccEEE
Q 010428 134 FYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAI 213 (511)
Q Consensus 134 ~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~ 213 (511)
+||+. +.+++|+|++.. -.|++..++|++... . .....+||.+ |.+++|+|||++++. +.+.
T Consensus 81 yys~~-----~~i~va~s~~p~----gp~~~~~~~p~~~~~--~--~~~~~iDp~v-f~d~dG~~yl~~~~~----~~~~ 142 (275)
T cd09004 81 YFSAN-----GGIGVAVADSPL----GPFKDALGKPLIDKF--T--FGAQPIDPDV-FIDDDGQAYLYWGGW----GHCN 142 (275)
T ss_pred EEEcC-----CcEEEEEeCCCC----CCCCCCCCCccccCC--c--CCCCccCCCe-EECCCCCEEEEEcCc----CCEE
Confidence 99986 457899998764 357775567887543 1 2346899995 555789999999864 2233
Q ss_pred EE-EcCCCCCcEEcccccccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCCCceeEEEEE
Q 010428 214 LY-RSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVG 283 (511)
Q Consensus 214 ly-~S~Dl~~W~~~~~~l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~~~~~~Y~iG 283 (511)
++ -|+|+.+|+.....+ ......+.|||.+|+.+ | +++|++|........|.+|
T Consensus 143 i~~l~~d~~~~~~~~~~~-~~~~~~~~EgP~i~k~~--G-------------~yyl~ys~~~~~~~~Y~~~ 197 (275)
T cd09004 143 VAKLNEDMISFDGERDGS-EITPKNYFEGPFMFKRN--G-------------IYYLMWSEGGWTDPDYHVA 197 (275)
T ss_pred EEEECCCcccccCcceee-eccCCCceecceEEEEC--C-------------EEEEEEECCCCCCCCceEE
Confidence 33 478998886432221 11234589999999997 6 8888888754322334444
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.2e-20 Score=183.59 Aligned_cols=146 Identities=18% Similarity=0.227 Sum_probs=115.2
Q ss_pred CCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecC-CCCCC--CCCccCCCeEeeeEEEcCCCceEEEEe
Q 010428 60 DPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHD-PAIYP--SQQSDINGCWSGSATILPGEKPAIFYT 136 (511)
Q Consensus 60 DPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~-~aL~P--~~~~D~~g~~SGsav~~~dg~~~l~YT 136 (511)
|| |+++++|+||||||.++.. +.++||||+|+|++||++.+ +.|.| +..++..+|++++++. .+|+++|+||
T Consensus 2 nP-~v~~~~G~y~l~y~~~~~~---~~~~ig~A~S~Dg~~~~~~~~~~i~p~~~~~~~~~gv~dP~v~~-~~g~y~m~Yt 76 (268)
T cd08993 2 NP-AVVYDNGEFYLLYRAAGND---GVIRLGLARSRDGLHFEIDPDPPVWPPPEDGFEEGGVEDPRIVK-IDDTYYITYA 76 (268)
T ss_pred cC-eEEEECCEEEEEEEEECCC---CceEEEEEEECCCceEEECCcceEcCCCCCcccccCccCcEEEE-ECCEEEEEEE
Confidence 78 8999999999999987643 57899999999999999975 34666 5678889999999986 4999999999
Q ss_pred ccCC-CCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeC-CCCeEEEEEeeec---CCccE
Q 010428 137 GIDP-HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLG-PDKRWRVIIGSKI---NRKGL 211 (511)
Q Consensus 137 g~~~-~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~-~~g~w~m~~ga~~---~~~G~ 211 (511)
+... ...+.+++|.|+|. ++|+|.. . ++. + ..||+. +|.+ .+|+|+|++.... +..+.
T Consensus 77 a~~~~~~~~~i~lA~S~D~-----~~W~~~~-~-~~~-~--------~~~d~~-~~p~~~~g~y~m~~r~~~~~~~~~~~ 139 (268)
T cd08993 77 ARPNAPNGTRIGLATTKDF-----ITFERLG-T-SLV-P--------NNRDGI-LFPEKINGKYVMLHRPFEYGGTSPPD 139 (268)
T ss_pred ccCCCCCCcEEEEEEeCCc-----ceEEEec-c-cCC-C--------CCCCEE-EeeEEECCEEEEEEccccCCCCCCCc
Confidence 9763 35678999999885 8999973 2 221 2 137887 4542 4899999996442 24678
Q ss_pred EEEEEcCCCCCcEEcc
Q 010428 212 AILYRSKDFVHWIKAK 227 (511)
Q Consensus 212 i~ly~S~Dl~~W~~~~ 227 (511)
|.+++|+|+.+|+..+
T Consensus 140 I~lA~S~Dl~~W~~~~ 155 (268)
T cd08993 140 MWLSFSPDLVHWGNHR 155 (268)
T ss_pred EEEEECCCcCccCCCe
Confidence 9999999999998764
|
This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08984 GH43_5 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.5e-19 Score=181.16 Aligned_cols=162 Identities=21% Similarity=0.298 Sum_probs=124.3
Q ss_pred ccCCcceEEECCEEEEEeeeCCCCC--CCCCcEEEEEEeCCCCcceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEEE
Q 010428 58 INDPNGVMIYKGIYHLFYQYNPKGA--VWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFY 135 (511)
Q Consensus 58 ~NDPnG~~~~~G~YHLFYQ~~P~~~--~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~l~Y 135 (511)
+.+| -+++++|+||||||++|..+ .++.++|+||+|+||++|++.+++.. +..++.+++++.+.+|+++|+|
T Consensus 79 ~WAP-~v~~~~G~y~myys~~~~~~~~~~~~~~i~~a~S~Dl~~w~~~~~~~~-----~~~~~iD~~vf~~~dg~~yl~y 152 (294)
T cd08984 79 FWAP-EVVWHGGVYHMYVTYIPGVPPDWGGPRRIVHYTSPNLWDWTFVGRVDL-----DSDRVIDACVFKLPDGRWRMWY 152 (294)
T ss_pred eeCc-eEEEECCEEEEEEEecCCCCcccCCCcEEEEEECCCcCcceECCcccc-----CCCCcEEeEEEEeCCCEEEEEE
Confidence 4578 47899999999999998753 34678999999999999999887632 2357899999887679999999
Q ss_pred eccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCccEEEEE
Q 010428 136 TGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILY 215 (511)
Q Consensus 136 Tg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~ly 215 (511)
|+.. ..+.+++|.|+|. .+|++. .+++... ..++|+| |+ .+|+|||+++. ..| +.+|
T Consensus 153 ~~~~--~~~~~~~a~s~D~-----~~w~~~--~~~i~~~--------~~EgP~v-~k-~~g~yym~~~~---~~g-~~~~ 209 (294)
T cd08984 153 KDER--RGSTTYAADSEDL-----YHWTVE--GPVLGDR--------PHEGPNV-FR-WKGYYWMIIDE---WKG-LGVY 209 (294)
T ss_pred ECCC--CCeEEEEEECCCC-----CEEEeC--CccccCC--------CCCCCCe-eE-ECCEEEEEEcC---Cce-EEEE
Confidence 9863 3346689998874 789985 3565422 2479995 55 57899999854 234 6799
Q ss_pred EcCCCCCcEEcccccccCC----CCCceecCceEEec
Q 010428 216 RSKDFVHWIKAKHPLHSVK----GTGMWECPDFFPVS 248 (511)
Q Consensus 216 ~S~Dl~~W~~~~~~l~~~~----~~g~wECPdlf~l~ 248 (511)
+|+|+.+|++.+.++.... ...+++||++++.+
T Consensus 210 ~S~D~~~W~~~~~~l~~~~~~~~~~~~~~H~~i~~~~ 246 (294)
T cd08984 210 RSKDAENWERQGGILLKPGTRPDDGAKGRHADVVVTG 246 (294)
T ss_pred ECCChhhcEECCeeeccCCCCccccccccCCcEEEeC
Confidence 9999999999887665321 23478999999886
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08999 GH43_ABN_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.79 E-value=1e-17 Score=169.03 Aligned_cols=186 Identities=20% Similarity=0.203 Sum_probs=132.2
Q ss_pred CCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCC-ccCCCeEeeeEEEcCCCceEEE
Q 010428 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQ-SDINGCWSGSATILPGEKPAIF 134 (511)
Q Consensus 56 gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~-~D~~g~~SGsav~~~dg~~~l~ 134 (511)
+.+-|| .+++++|+|+||+..... .+|++++|+||+||+..+.+|.+... .+..++|.++++. .+|+++|+
T Consensus 6 ~~~~DP-~i~~~~g~yy~~~t~~~~------~~i~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~waP~v~~-~~g~y~~~ 77 (287)
T cd08999 6 GDFPDP-SVIRVDGTYYAYATNGNG------PNVPIATSTDLVNWTYLGDAFPKLPRWWTGGDFWAPDVSY-VNGKYVLY 77 (287)
T ss_pred CCCCCC-eEEEECCEEEEEEeCCCC------CcEEEEECCCCCCcEECCcccCCCCCcccCCCccCceEEE-ECCEEEEE
Confidence 456799 577889999999986532 57999999999999999988877654 4556789888876 48999999
Q ss_pred EeccCC-CCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCcc---
Q 010428 135 YTGIDP-HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKG--- 210 (511)
Q Consensus 135 YTg~~~-~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G--- 210 (511)
|++... ...+.+++|+|++.. -.|++....++..+. .....+||.| +.+++|+|||++++.....|
T Consensus 78 y~~~~~~~~~~~i~~a~s~~p~----g~~~~~~~~~~~~~~-----~~~~~~Dp~v-~~d~dG~~Yl~~~~~~~~~~~~~ 147 (287)
T cd08999 78 YSARDKGSGGQCIGVATADSPL----GPFTDHGKPPLCCPE-----GEGGAIDPSF-FTDTDGKRYLVWKSDGNSIGKPT 147 (287)
T ss_pred EEeecCCCCCEEEEEEECCCCC----CCCccCCcceEecCC-----CCCCccCCCe-EECCCCCEEEEEeccCCCCCCCc
Confidence 999765 245667889887753 368876433333222 1245799995 55468999999987542212
Q ss_pred EEEEEE-cCCCCCcEEcccccccC---CCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCC
Q 010428 211 LAILYR-SKDFVHWIKAKHPLHSV---KGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD 274 (511)
Q Consensus 211 ~i~ly~-S~Dl~~W~~~~~~l~~~---~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~ 274 (511)
.+.+.+ |.|+.+|......+... ....++|||.+|+.+ | +|+|++|...
T Consensus 148 ~i~~~~ls~d~~~~~~~~~~i~~~~~~~~~~~~EgP~i~k~~--g-------------~yyl~~S~~~ 200 (287)
T cd08999 148 PIYLQELSADGLTLTGEPVRLLRNDEDWEGPLVEAPYLVKRG--G-------------YYYLFYSAGG 200 (287)
T ss_pred eEEEEEeCCCCccccCCcEeeecccccccCCceEeeEEEEEC--C-------------EEEEEEEcCC
Confidence 244443 78998886432222111 134589999999997 6 8999998753
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b |
| >cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.5e-16 Score=160.10 Aligned_cols=195 Identities=15% Similarity=0.211 Sum_probs=139.6
Q ss_pred CCcceEEECCEEEEEeeeCCCCCC---CCCcEEEEEEeCCCCcceecCCCCCCCC--CccCCCeEeeeEEEcCCCceEEE
Q 010428 60 DPNGVMIYKGIYHLFYQYNPKGAV---WGNIVWAHSTSKDLINWIPHDPAIYPSQ--QSDINGCWSGSATILPGEKPAIF 134 (511)
Q Consensus 60 DPnG~~~~~G~YHLFYQ~~P~~~~---~g~~~WgHa~S~DLvhW~~~~~aL~P~~--~~D~~g~~SGsav~~~dg~~~l~ 134 (511)
|| .+++++|+||||.......+. .....|..++|+||+||+..+.+|.+.. .++..++|.++++. .+|+++|+
T Consensus 2 DP-~~~~~~~~yy~~~t~~~~~~~~~~~~~~~~~v~~S~Dl~~W~~~g~~l~~~~~~~~~~~~~wAP~i~~-~~g~yy~y 79 (274)
T cd08990 2 DP-AAHVFNGRVYIYTSHDEAGGGGDDFCMNDYHVFSSPDLVNWTDHGVILSVTDFPAWAKGQAWAPDVVE-KNGKYYLY 79 (274)
T ss_pred CC-CcEEECCEEEEEeCCCCCCCCCCccccceEEEEECCCCCCcEECcccccCCCCCccccCCcCcCeEEE-ECCEEEEE
Confidence 89 577899999999987755432 3345699999999999999999887543 36778999999886 58999999
Q ss_pred EeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCccEEEE
Q 010428 135 YTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAIL 214 (511)
Q Consensus 135 YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~l 214 (511)
|++......+.+++|+|++.. -.|++....|++... . ......||.+ |.+++|++||++++. .+....
T Consensus 80 y~~~~~~~~~~igva~s~~p~----Gpw~~~~~~~~~~~~--~--~~~~~iDp~v-f~d~dG~~yl~~~~~---~~~~~~ 147 (274)
T cd08990 80 FPARDKDGGFAIGVAVSDSPA----GPFKDAGGPILITTP--S--GGWYSIDPAV-FIDDDGQAYLYWGGG---LGLRVA 147 (274)
T ss_pred EEeecCCCceEEEEEEeCCCC----CCCCCCCCccccccC--C--CCCCccCCcE-EECCCCCEEEEECCc---CCEEEE
Confidence 999754445678899998753 358876555555322 1 2345789995 555689999999864 233334
Q ss_pred EEcCCCCCcEEccccccc-----CCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCCCceeEEEEE
Q 010428 215 YRSKDFVHWIKAKHPLHS-----VKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVG 283 (511)
Q Consensus 215 y~S~Dl~~W~~~~~~l~~-----~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~~~~~~Y~iG 283 (511)
-.|+|+.+|+.....+.. ....+..|+|.+|+.+ | +++|++|........|.+.
T Consensus 148 ~l~~d~~~~~~~~~~i~~~~~~~~~~~~~~EgP~i~k~~--G-------------~YYl~yS~~~~~~~~~a~s 206 (274)
T cd08990 148 KLKPDMLSLKGEPVEIVITDGAGDELRRFFEAPWVHKRN--G-------------TYYLSYSTGDPEEIAYATS 206 (274)
T ss_pred EeCccccccCCCcEEEEeccccCCCCCCcccceeEEEEC--C-------------EEEEEEECCCCcEEEEEEc
Confidence 458899999743322321 1234578999999997 6 8999999765445555544
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of |
| >cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.4e-15 Score=151.14 Aligned_cols=190 Identities=22% Similarity=0.265 Sum_probs=130.8
Q ss_pred CCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCC----CCCCccCCCeEeeeEEEcCCCceEEEE
Q 010428 60 DPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIY----PSQQSDINGCWSGSATILPGEKPAIFY 135 (511)
Q Consensus 60 DPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~----P~~~~D~~g~~SGsav~~~dg~~~l~Y 135 (511)
|| .+++++|+|+||+..... ....++.++|+||++|+..+.+|. +....+..++|.++++.. +|+++|+|
T Consensus 2 DP-~v~~~~~~yyl~~t~~~~----~~~~i~i~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~waP~v~~~-~g~yyl~y 75 (271)
T cd08978 2 DP-YILRYNGKYYLYGSTDDA----AGPGVQVWSSKDLVNWRYEGAVFVAWRGRGEAKDSGGLWAPEVIYY-EGKYYLYY 75 (271)
T ss_pred CC-cEEEECCEEEEEEecCCc----CCCcEEEEECCccCCcEECCcccccccccCCcccCCceeCCeEEEE-CCEEEEEE
Confidence 89 578899999999997643 234689999999999999998875 444556688999999874 79999999
Q ss_pred eccCC-CCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecC--CccEE
Q 010428 136 TGIDP-HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN--RKGLA 212 (511)
Q Consensus 136 Tg~~~-~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~--~~G~i 212 (511)
++... ...+.+++|+|+|. ..|.+... ...+ . ......+||.+ |.+++|++||++++... +.+.|
T Consensus 76 ~~~~~~~~~~~i~~a~s~d~-----~g~~~~~~---~~~~--~-~~~~~~iDp~v-f~d~dg~~yl~~~~~~~~~~~~~i 143 (271)
T cd08978 76 SVSDFDYNGSGIGVATSEDP-----TGPFEDKV---IRPP--T-SNNGNSIDPTV-FKDDDGKYYLYYGSGDPGAGFGGI 143 (271)
T ss_pred EcccCCCCcccEEEEECCCC-----CCCccccc---cCcC--c-cCCCCccCcce-EEcCCCCEEEEEecccCCCCCCcE
Confidence 99753 24567889998876 34444321 1111 1 12245789996 45467999999987642 24568
Q ss_pred EEEEcCCCCCcEEccccc---ccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCCCceeEEEEE
Q 010428 213 ILYRSKDFVHWIKAKHPL---HSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVG 283 (511)
Q Consensus 213 ~ly~S~Dl~~W~~~~~~l---~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~~~~~~Y~iG 283 (511)
.++++++...|.. +.+. .......+.|+|.+|+.+ | +|+|++|........|.++
T Consensus 144 ~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~EgP~~~k~~--g-------------~yyl~ys~~~~~~~~y~~~ 201 (271)
T cd08978 144 YISELTDDLTKPT-GPPVLSASSGNNNAVTEGPTIFKKN--G-------------YYYLTYSANGTGDYGYNIG 201 (271)
T ss_pred EEEEECccccccc-CCceeeeeeccCCCceEccEEEEEC--C-------------EEEEEEEeCCCCCCCceEE
Confidence 8888876555432 2221 111234589999999997 6 8899888754322345554
|
This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma |
| >cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.67 E-value=6.8e-15 Score=149.24 Aligned_cols=180 Identities=18% Similarity=0.188 Sum_probs=126.0
Q ss_pred CCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCC-CccCCCeEeeeEEEcCCCceEEEEecc
Q 010428 60 DPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQ-QSDINGCWSGSATILPGEKPAIFYTGI 138 (511)
Q Consensus 60 DPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~-~~D~~g~~SGsav~~~dg~~~l~YTg~ 138 (511)
|| .+++++|+|+||+..... ...+..++|+||+||+.++.++.+.. .++..++|.++++. .+|+++|+|++.
T Consensus 2 DP-~v~~~~g~yyl~~t~~~~-----~~~i~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~waP~v~~-~~g~yyl~ys~~ 74 (294)
T cd08991 2 DP-FVLRYNGKYYAYGTGGAD-----GRGFAVYSSPDLVDWKLHGGALLALDDDWGRRGFWAPEVYY-YNGKFYMYYSAN 74 (294)
T ss_pred CC-eEEEECCEEEEEEeCCCC-----CCeeEEEECCCCCCceECCccccCCCCCccCCcEEccEEEE-ECCEEEEEEEec
Confidence 89 578899999999886543 23588999999999999998887654 36778999999887 489999999997
Q ss_pred CCC-CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCC---ccEEEE
Q 010428 139 DPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINR---KGLAIL 214 (511)
Q Consensus 139 ~~~-~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~---~G~i~l 214 (511)
... ..+.+++|+|+|.. -.|++... +.+.. + ...+||.++ .+++|+|||+++..... .+....
T Consensus 75 ~~~~~~~~i~~a~s~~p~----gp~~~~~~-~~~~~----~---~~~iD~~vf-~d~dG~~yl~~~~~~~~~~~~~i~~~ 141 (294)
T cd08991 75 DRDEKTEHIGVAVSDSPL----GPFRDIKK-PPIDF----E---PKSIDAHPF-IDDDGKPYLYYSRNNYGNRVSDIYGT 141 (294)
T ss_pred cCCCCcceEEEEEeCCCC----CCCCcCCC-CcccC----C---CcccCCceE-ECCCCCEEEEEEecCCCCcccceEEE
Confidence 543 55788999998753 34776432 22221 1 246799954 44679999999865422 233344
Q ss_pred EEcCCCCCcEEcc----cccccC--------------CCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCC
Q 010428 215 YRSKDFVHWIKAK----HPLHSV--------------KGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD 274 (511)
Q Consensus 215 y~S~Dl~~W~~~~----~~l~~~--------------~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~ 274 (511)
--|.|+.+|.... .++..+ ....+.|+|.+++.+ | +|+|++|...
T Consensus 142 ~l~~d~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~~k~~--g-------------~yyl~ys~~~ 204 (294)
T cd08991 142 ELVDDKLSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTVLKHN--G-------------RYYLTYSANH 204 (294)
T ss_pred EEccceeeeccceeeccccccccccccccccccccccccCceeeCcEEEEEC--C-------------EEEEEEECCC
Confidence 4588887775211 111110 123489999999997 6 8889888643
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.5e-14 Score=149.44 Aligned_cols=178 Identities=18% Similarity=0.269 Sum_probs=127.4
Q ss_pred CccccccCCCCC-ccCCcceEEECCEEEEEeeeCCC-----------CC--CCCCcEEEEEEeCCCCcceecCCCCCCC-
Q 010428 46 RTGYHFQPPKNW-INDPNGVMIYKGIYHLFYQYNPK-----------GA--VWGNIVWAHSTSKDLINWIPHDPAIYPS- 110 (511)
Q Consensus 46 Rp~yHf~p~~gw-~NDPnG~~~~~G~YHLFYQ~~P~-----------~~--~~g~~~WgHa~S~DLvhW~~~~~aL~P~- 110 (511)
.|..=+.+..+. ..||..+++.+|+|||||++... .+ .|....++||+|+||+||++.+++|.+.
T Consensus 24 ~p~~~~~~e~~i~r~dP~~Vi~~~g~Y~mwYs~~~~~~~~~~~~~~~~~~~~w~~y~I~~A~S~Dgv~W~~~g~~L~~~~ 103 (349)
T cd08992 24 YPKGGLGYEEGVHRRDPSSVIKVDGLYHVWYTKSEGETDGFGTGDPEAKVFPWDKCEIWHATSKDGWTWKEEGPAIGRGE 103 (349)
T ss_pred CcccccccccCeecCCCceEEEECCEEEEEEEecCCcccccccCCccccccCCCceEEEEEECCCCCCceECCccccCCC
Confidence 445545555553 45998899999999999996532 11 2456789999999999999999888754
Q ss_pred -CCccCCCeEeeeEEEcCCCceEEEEeccCCC----CcceEEEEEecCCCCcccceeeecCCCceecCCCC---------
Q 010428 111 -QQSDINGCWSGSATILPGEKPAIFYTGIDPH----NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAM--------- 176 (511)
Q Consensus 111 -~~~D~~g~~SGsav~~~dg~~~l~YTg~~~~----~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~--------- 176 (511)
..||..++|.++++. .+|+++|+|++.... ..+.+++|+|++.. -.|++. .+||+.+...
T Consensus 104 ~g~Wd~~~vwaP~Vi~-~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~----GpWtr~-d~Pil~p~~dg~w~~d~~~ 177 (349)
T cd08992 104 KGAYDDRSVFTPEVLE-HEGTYYLVYQVVKSPYLNRSFESIAMAVADSPY----GPWTKS-DEPILSPSNDGIWKGDEDN 177 (349)
T ss_pred CCCccccceECcEEEE-ECCEEEEEEEecccccCCCCcceEEEEEECCcc----cccccC-CCcEecCCcCCceeeccCc
Confidence 358999999999875 599999999975421 23578999998763 249885 6899854310
Q ss_pred -------CcCCCCCCCCCEEEEeCCCCeEEEEEeeecC--------CccEEEEEEcCCCC-CcEEcc-cccc
Q 010428 177 -------NQINTSSFRDPTTAWLGPDKRWRVIIGSKIN--------RKGLAILYRSKDFV-HWIKAK-HPLH 231 (511)
Q Consensus 177 -------~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~--------~~G~i~ly~S~Dl~-~W~~~~-~~l~ 231 (511)
..++...+.||.|+ + .+|+|||++.+... ..-++.|+.|++.. -|+... .|+.
T Consensus 178 ~~~~~~~g~wD~~~v~~P~v~-~-~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~GPf~r~~~nPi~ 247 (349)
T cd08992 178 RFLVKKKGSFDSHKVHDPCLF-P-FNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPEGPYVKSPYNPIT 247 (349)
T ss_pred eeEeccCCCcccCceECCEEE-E-ECCEEEEEEEccccCcccccCCCCceEEEEEECCCCCCCEeCCCCccc
Confidence 11445567899964 4 48999999966431 12358899999876 687643 3554
|
This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08998 GH43_ABN_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.61 E-value=4e-14 Score=143.44 Aligned_cols=179 Identities=21% Similarity=0.234 Sum_probs=122.9
Q ss_pred ccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCC-------ccCCCeEeeeEEEcCCCc
Q 010428 58 INDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQ-------SDINGCWSGSATILPGEK 130 (511)
Q Consensus 58 ~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~-------~D~~g~~SGsav~~~dg~ 130 (511)
+.|| .+++++|+|+||+... ++++++|+||+||++.+.+|.+... .+..++|.++++. .+|+
T Consensus 1 ~~DP-~v~~~~~~yyl~~t~~---------~i~i~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~wAP~v~~-~~g~ 69 (288)
T cd08998 1 VHDP-SIIKEGDTYYLFSTGN---------GIAIAKSKDLGNWTYVGSVFPTGPPWWSSIDPGGSGNLWAPDVIY-LNGK 69 (288)
T ss_pred CCCC-eEEEECCEEEEEEcCC---------CeEEEECCCCCCcEECCccccCCCccccccccCCCCCccCCeEEE-ECCE
Confidence 4699 5889999999999864 6899999999999999988865432 3457899999876 4999
Q ss_pred eEEEEeccCCC-CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCc
Q 010428 131 PAIFYTGIDPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRK 209 (511)
Q Consensus 131 ~~l~YTg~~~~-~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~ 209 (511)
++|+|++.... ....+++|+|++.. ...|++. +||+... .+......+||.+ |.+++|++||++++...
T Consensus 70 yyl~ys~~~~~~~~~~i~va~s~~~~---~gpw~~~--~~v~~~~--~~~~~~~~iDp~v-f~d~dG~~Yl~~~~~~~-- 139 (288)
T cd08998 70 YYLYYSVSTFGSNRSAIGLATSDTLP---DGPWTDH--GIVIESG--PGRDDPNAIDPNV-FYDEDGKLWLSFGSFWG-- 139 (288)
T ss_pred EEEEEEEEeCCCCceEEEEEEeCCCC---CCCCEEc--ceeeecC--CCCCCcccccCCE-EEcCCCCEEEEeeeccC--
Confidence 99999987543 45667899998750 1468874 5888543 2212345789996 45468999999986431
Q ss_pred cEEEEEE-cCC---CCCcEEcccccccCC-CCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 010428 210 GLAILYR-SKD---FVHWIKAKHPLHSVK-GTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (511)
Q Consensus 210 G~i~ly~-S~D---l~~W~~~~~~l~~~~-~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~ 273 (511)
| +.+.+ +.| ...|......+...+ ..+..|-|.+|+.+ | +++|++|..
T Consensus 140 ~-i~~~~l~~~~~~~~~~~~~~~~i~~~~~~~~~~Egp~~~k~~--g-------------~YYl~~S~~ 192 (288)
T cd08998 140 G-IFLVELDPKTGKPLYPGGYGYNIAGRPRGHGAIEAPYIIYRG--G-------------YYYLFVSYG 192 (288)
T ss_pred C-EEEEEeCcccCCccCCCCcceEEeccCCCCCceeeeEEEEeC--C-------------EEEEEEEcc
Confidence 2 33333 222 123321111111111 23468999999997 6 888888854
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b |
| >cd08984 GH43_5 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.1e-13 Score=140.78 Aligned_cols=169 Identities=20% Similarity=0.271 Sum_probs=118.5
Q ss_pred ccCCcceEEE--CCEEEEEeeeC----CCC-CCCC-CcEEEEEEeCC-CCcceecCCCCCCCCCccCCCeEeeeEEEcCC
Q 010428 58 INDPNGVMIY--KGIYHLFYQYN----PKG-AVWG-NIVWAHSTSKD-LINWIPHDPAIYPSQQSDINGCWSGSATILPG 128 (511)
Q Consensus 58 ~NDPnG~~~~--~G~YHLFYQ~~----P~~-~~~g-~~~WgHa~S~D-LvhW~~~~~aL~P~~~~D~~g~~SGsav~~~d 128 (511)
.-|| .+++. +|+|||||... |.. ..|. ...+|+|+|+| |+||++++.++.++..++...+|.+.++. .+
T Consensus 11 ~~DP-~i~~~~~~~~~~~~yT~~~~~~~~~~~~w~~~~~i~~a~S~D~l~~W~~~g~~~~~~~~~~~~~~WAP~v~~-~~ 88 (294)
T cd08984 11 AADP-TIIYNRETKEWWMFYTNRRANVPTPGVAWVHGTDIGVASSKDGGATWTYRGTADGLEFECGRNTFWAPEVVW-HG 88 (294)
T ss_pred CCCC-EEEEeCCCCEEEEEEccccCcCCCCCcccCcCceEEEEEeCCCCCCCEEeeeeccCCCCCcccceeCceEEE-EC
Confidence 7899 57786 88999999521 111 1233 35799999999 99999998777664455667799999986 48
Q ss_pred CceEEEEeccCC-----CCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEe
Q 010428 129 EKPAIFYTGIDP-----HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIG 203 (511)
Q Consensus 129 g~~~l~YTg~~~-----~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~g 203 (511)
|+++|||+.... ......++|+|+| +.+|++.+ ++.... ....||.| ++..+|+|+|++.
T Consensus 89 G~y~myys~~~~~~~~~~~~~~i~~a~S~D-----l~~w~~~~--~~~~~~-------~~~iD~~v-f~~~dg~~yl~y~ 153 (294)
T cd08984 89 GVYHMYVTYIPGVPPDWGGPRRIVHYTSPN-----LWDWTFVG--RVDLDS-------DRVIDACV-FKLPDGRWRMWYK 153 (294)
T ss_pred CEEEEEEEecCCCCcccCCCcEEEEEECCC-----cCcceECC--ccccCC-------CCcEEeEE-EEeCCCEEEEEEE
Confidence 999999997532 1345678888887 37898753 332111 23579985 4446799999996
Q ss_pred eecCCccEEEEEEcCCCCCcEEcccccccCCCCCceecCceEEec
Q 010428 204 SKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVS 248 (511)
Q Consensus 204 a~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~g~wECPdlf~l~ 248 (511)
.... ...+.+..|+|+.+|+..+..+ . ...-|.|.+|+.+
T Consensus 154 ~~~~-~~~~~~a~s~D~~~w~~~~~~i-~---~~~~EgP~v~k~~ 193 (294)
T cd08984 154 DERR-GSTTYAADSEDLYHWTVEGPVL-G---DRPHEGPNVFRWK 193 (294)
T ss_pred CCCC-CeEEEEEECCCCCEEEeCCccc-c---CCCCCCCCeeEEC
Confidence 5322 2245778899999999754332 2 1234999999987
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08985 GH43_6 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.4e-12 Score=130.98 Aligned_cols=189 Identities=16% Similarity=0.105 Sum_probs=130.2
Q ss_pred CCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCC----CccCCCeEeeeEEEcC-CCceEEE
Q 010428 60 DPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQ----QSDINGCWSGSATILP-GEKPAIF 134 (511)
Q Consensus 60 DPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~----~~D~~g~~SGsav~~~-dg~~~l~ 134 (511)
|| ++++++|+|++|-.....+.. ....|-..+|+||+||+.++.+|.+.. .+...++|.++++..+ +|+++|+
T Consensus 5 ~~-~i~~~~~~yY~ygs~~~~~~~-~~~gi~~~sS~DLvnW~~~g~vl~~~~~~~~~~~~~~~waP~v~y~~~~g~Y~m~ 82 (265)
T cd08985 5 GG-GILKVGGTYYWYGENKGGGDT-AFGGVSCYSSTDLVNWTFEGLALTPEEDSADLGPGRIIERPKVIYNAKTGKYVMW 82 (265)
T ss_pred cC-ceEEECCEEEEEEEecCCCCc-ccccEEEEECCCCccceECceeccccccccccccCcEEECCeEEEeCCCCEEEEE
Confidence 56 688999999999887643211 134588899999999999999998764 3445678999998643 6899999
Q ss_pred EeccCC-CCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCccEEE
Q 010428 135 YTGIDP-HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAI 213 (511)
Q Consensus 135 YTg~~~-~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~ 213 (511)
|++.+. .....+++|+|++..+ .|+... .+. + . ....|||.+ |.++||++||++++..+ ..+.
T Consensus 83 ~~~~~~~~~~~~igvA~Sd~p~G----pf~~~~-~~~---~--~---~~~~~Dp~v-f~DdDG~~Yl~~~~~~~--~~i~ 146 (265)
T cd08985 83 MHIDSSDYSDARVGVATSDTPTG----PYTYLG-SFR---P--L---GYQSRDFGL-FVDDDGTAYLLYSDRDN--SDLY 146 (265)
T ss_pred EEeCCCCCcceeEEEEEeCCCCC----CCEECC-ccC---C--C---CCCccCCce-EEcCCCCEEEEEecCCC--CceE
Confidence 998653 2446789999987643 355432 221 1 1 134799996 45578999999997532 2355
Q ss_pred EEE-cCCCCCcEEcccccccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCC---CceeEEEEEE
Q 010428 214 LYR-SKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD---TKHEYYTVGT 284 (511)
Q Consensus 214 ly~-S~Dl~~W~~~~~~l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~---~~~~~Y~iG~ 284 (511)
+++ ++|+..+.. .+.. .......|||.+|+.+ | +|+|+.|... .....|++.+
T Consensus 147 i~~L~~d~~~~~~--~~~~-~~~~~~~EaP~i~K~~--g-------------~YYL~~S~~t~~~~~~~~y~~s~ 203 (265)
T cd08985 147 IYRLTDDYLSVTG--EVTT-VFVGAGREAPAIFKRN--G-------------KYYLLTSGLTGWNPNDARYATAT 203 (265)
T ss_pred EEEeCCCcccccc--eEEE-ccCCCccccceEEEEC--C-------------EEEEEEccCCCccCCceEEEEec
Confidence 665 568777752 2221 1224579999999998 6 8999988642 2345676664
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.8e-12 Score=129.06 Aligned_cols=178 Identities=18% Similarity=0.167 Sum_probs=118.0
Q ss_pred CCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCC--c----cCCCeEeeeEEEcCCC
Q 010428 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQ--S----DINGCWSGSATILPGE 129 (511)
Q Consensus 56 gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~--~----D~~g~~SGsav~~~dg 129 (511)
+.+-||. +++++|+|+||...... ...+..++|+||+||+.++.+|.+... + ...++|.+.++. .+|
T Consensus 6 ~~~~DP~-i~~~~~~yy~~~t~~~~-----~~~i~~~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~g 78 (288)
T cd09000 6 GFYPDPS-ICRVGDDYYLVTSSFEY-----FPGVPIFHSKDLVNWELIGHALTRPSQLDLDGLPDSGGIWAPTIRY-HDG 78 (288)
T ss_pred CCCCCCC-EEEECCEEEEEECCccc-----CCCceEEECCCcCCcEEcccccCCcccccccCCCCCCceEcceEEE-ECC
Confidence 4677995 88899999998532211 135889999999999999988854321 1 346799999986 499
Q ss_pred ceEEEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecC--
Q 010428 130 KPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN-- 207 (511)
Q Consensus 130 ~~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~-- 207 (511)
++||+|++........+++|++++..+ .|+. |++.. ...+||.++ .+++|++||+.+....
T Consensus 79 ~yy~yy~~~~~~~~~~~~v~~s~~p~g----pw~~----~~~~~--------~~~iDp~vf-~d~dG~~Y~~~~~~~~~~ 141 (288)
T cd09000 79 TFYLITTNVDGMKDGGNFIVTADDPAG----PWSD----PVWLD--------SGGIDPSLF-FDDDGKVYLVGNGWDERR 141 (288)
T ss_pred EEEEEEEecCCCCCCceEEEEeCCCCC----CCcC----CEecC--------CCccCCcee-EcCCCCEEEEecccCCcc
Confidence 999999987543344677888877643 3542 33211 146899964 4478999999886432
Q ss_pred ---CccEEEEEEcCCCCCcEEcccc--cccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 010428 208 ---RKGLAILYRSKDFVHWIKAKHP--LHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (511)
Q Consensus 208 ---~~G~i~ly~S~Dl~~W~~~~~~--l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~ 273 (511)
+.+.|.+.+. |...|+..+.+ +.........|+|.+|+.+ | +++|++|..
T Consensus 142 ~~~~~~~i~~~~l-~~~~~~~~~~~~~~~~~~~~~~~Egp~v~k~~--g-------------~YYl~ys~~ 196 (288)
T cd09000 142 GYNGHGGIWLQEI-DLETGKLLGEPKVIWNGTGGRWPEGPHLYKRD--G-------------WYYLLIAEG 196 (288)
T ss_pred ccCCCCcEEEEEE-ccccCCCCCCcEEEEeCCCCCCcccCeEEEEC--C-------------EEEEEEecC
Confidence 1234555553 23344433332 2222223578999999987 6 888888754
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend |
| >cd09003 GH43_AXH_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.44 E-value=8.7e-12 Score=128.11 Aligned_cols=187 Identities=13% Similarity=0.254 Sum_probs=125.2
Q ss_pred CCccCCcceEEECCEEEEEeeeCCCCC---------CCCCcEEEEEEeCCCCcceecCCCCCCC--CCccCCCeEeeeEE
Q 010428 56 NWINDPNGVMIYKGIYHLFYQYNPKGA---------VWGNIVWAHSTSKDLINWIPHDPAIYPS--QQSDINGCWSGSAT 124 (511)
Q Consensus 56 gw~NDPnG~~~~~G~YHLFYQ~~P~~~---------~~g~~~WgHa~S~DLvhW~~~~~aL~P~--~~~D~~g~~SGsav 124 (511)
.+..||. ++.++|+|+||....-... .+....+-..+|+||+||+.++.+|.|. ..|. .++|.++++
T Consensus 7 ~~~aDP~-~~~~~g~yY~~~t~~~~~~~~~~~~~~~~~~~~~i~v~~S~DL~~W~~~g~v~~~~~~~~w~-~~~WAP~v~ 84 (311)
T cd09003 7 RYGADPT-AVVYNGRVYVYTTNDDYEYDSNTIKDNNYYNINDITVISSDDMVNWTDHGEIFVPNGIAKWA-GNSWAPSIA 84 (311)
T ss_pred CccCCCC-eEEECCEEEEEeCCCCccccccccccCCccccCcEEEEECCCCCCcEEcccccCcCCCCCcc-cccCCCceE
Confidence 4668995 6789999999998754321 1223467889999999999999988742 3443 478999987
Q ss_pred EcCC----CceEEEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCC-CCCCEEEEeCCCCeEE
Q 010428 125 ILPG----EKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSS-FRDPTTAWLGPDKRWR 199 (511)
Q Consensus 125 ~~~d----g~~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~-fRDP~vvw~~~~g~w~ 199 (511)
. .+ |++||+|+.. ...+++|+|++..+ .|+...+.|++.... ++..... -.||.+ |.++||++|
T Consensus 85 ~-~~~~~~gkyylyy~~~----~~~igva~SdsP~G----P~~~~~g~~l~~~~~-~~~~~~~~~iDp~~-f~DdDG~~Y 153 (311)
T cd09003 85 V-KKINGKGKFYLYFANG----GGGIGVLTADSPVG----PWTDPLGKPLITGST-PGCAGVVWLFDPAV-FVDDDGQGY 153 (311)
T ss_pred E-eccCCCCEEEEEEecC----CCeEEEEEcCCCCC----CcccCCCCeeecCCC-CCccCCccccCCCe-EECCCCCEE
Confidence 6 46 9999999854 23578999887643 588754567774310 1211112 369995 455799999
Q ss_pred EEEeeecC-----CccEEEEEE-cCCCCCcEEcccccccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 010428 200 VIIGSKIN-----RKGLAILYR-SKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (511)
Q Consensus 200 m~~ga~~~-----~~G~i~ly~-S~Dl~~W~~~~~~l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~ 273 (511)
|++++... ..+.+.+.+ ++|+..-. +++..- .....+|.|.+++.+ | +++|.+|..
T Consensus 154 l~~g~~~~~~~~~~~~~i~i~~l~~D~~~~~--g~~~~i-~~~~~~Egp~~~K~~--G-------------~YYL~ys~~ 215 (311)
T cd09003 154 LYFGGGVPGGRWANPNTARVIKLGDDMISVD--GSAVTI-DAPYFFEASGLHKIN--G-------------TYYYSYCTN 215 (311)
T ss_pred EEECCccCCCccccCCCEEEEEeCCCceecc--CCceEc-cCCCceEeeeEEEEC--C-------------EEEEEEeCC
Confidence 99986421 123456665 55765432 222111 112579999999997 6 888988854
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose |
| >PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.6e-11 Score=123.40 Aligned_cols=183 Identities=20% Similarity=0.245 Sum_probs=126.4
Q ss_pred CCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCcc--CCCe-EeeeEEEcCCCceE
Q 010428 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSD--INGC-WSGSATILPGEKPA 132 (511)
Q Consensus 56 gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D--~~g~-~SGsav~~~dg~~~ 132 (511)
+..-|| -+++++|.|+||+...+.. ..+..++|+||+||+..+.+|.+....+ ..+. |.+.++. .+|+++
T Consensus 8 ~~~~DP-~i~~~~~~yY~~~t~~~~~-----~~i~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~WAP~i~~-~~g~yy 80 (286)
T PF04616_consen 8 GDYADP-SIVRFGDGYYLYGTTDPEG-----PGIPVWSSKDLVNWTDAGNVLPPPPDWDWANNGNIWAPEIHY-INGKYY 80 (286)
T ss_dssp SSECSE-EEEEETTEEEEEEEEBTCE-----SBEEEEEESSSSSEEEEEECESSTTTTSTTTSETTEEEEEEE-ETTEEE
T ss_pred CCCCCC-EEEEECCEEEEEEEcCCCC-----CeEEEEECCCCcccccceeeecccccccccccccccCCeEEE-cCCeEE
Confidence 566799 5888999999999876543 3588999999999999997776654333 2333 9999876 599999
Q ss_pred EEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCC--cc
Q 010428 133 IFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINR--KG 210 (511)
Q Consensus 133 l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~--~G 210 (511)
|+|+.........+++|++++.. -.|+... .+.+. .....||.++ .+++|++||+.+..... .+
T Consensus 81 ~y~~~~~~~~~~~~~va~a~~~~----Gp~~~~~-~~~~~--------~~~~iD~~vf-~d~dG~~Yl~~~~~~~~~~~~ 146 (286)
T PF04616_consen 81 MYYSDSGGDAGSGIGVATADSPD----GPWTDPG-KIPIP--------GGNSIDPSVF-VDDDGKYYLYYGSWDNGDPGG 146 (286)
T ss_dssp EEEEEESTSTTEEEEEEEESSTT----S-EEEEE-EEEEE--------SSSSSSEEEE-EETTSEEEEEEEESTTTSSEE
T ss_pred EEEEccCCCCCcceeEEEeCCcc----ccccccc-ceeec--------cccccCceEE-EecCCCcEEeCcccCCCccce
Confidence 99993322345668899998764 3577642 12211 1235799965 44679999999986532 34
Q ss_pred EEEEEE-cCCCCCcEEcc-cccccC---CCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCC
Q 010428 211 LAILYR-SKDFVHWIKAK-HPLHSV---KGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD 274 (511)
Q Consensus 211 ~i~ly~-S~Dl~~W~~~~-~~l~~~---~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~ 274 (511)
.|.+.+ +.|...+.... ..+... ......|+|.+|+.+ | +++|++|...
T Consensus 147 ~i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~Egp~~~k~~--g-------------~yYl~~s~~~ 200 (286)
T PF04616_consen 147 GIYIAELDPDGTSLTGEPVVVIFPGDEGWDGGVVEGPFVFKHG--G-------------KYYLFYSAGG 200 (286)
T ss_dssp EEEEEEEETTTSSEEEEECEEEEEESGSSTTTBEEEEEEEEET--T-------------EEEEEEEESG
T ss_pred eEEeecccCccccccCcccccccccccccCCccccceEEEEcC--C-------------CEEEEEeccC
Confidence 566666 56776665433 122221 235689999999997 6 8889988643
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B .... |
| >PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.9e-12 Score=133.00 Aligned_cols=163 Identities=20% Similarity=0.339 Sum_probs=113.5
Q ss_pred CCcceEEECCE--EEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecC-CCCCCCCCccCCCeEeeeEEEcCCCceEEEEe
Q 010428 60 DPNGVMIYKGI--YHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHD-PAIYPSQQSDINGCWSGSATILPGEKPAIFYT 136 (511)
Q Consensus 60 DPnG~~~~~G~--YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~-~aL~P~~~~D~~g~~SGsav~~~dg~~~l~YT 136 (511)
.| |++.++|. |||.|...-. ..+..+.|.|.|+|.+||+..+ ++|.|+..++..||....++.. +|+++|+||
T Consensus 34 Np-gai~~~~~~R~~l~yr~~~~--~~~~~~iglA~S~DGi~f~~~~~pil~P~~~~e~~GvEDPRVt~i-~d~yymtYt 109 (312)
T PF04041_consen 34 NP-GAIVFDGGLRVYLLYRAYGS--DIGSSRIGLARSDDGIHFERDPEPILYPDTDYEEWGVEDPRVTKI-DDTYYMTYT 109 (312)
T ss_dssp EE-EEEEETTE--EEEEEEEEES--SSSEEEEEEEEESSSSS-EE-SS-SBEE-SSTTHTEEEEEEEEEE-TTEEEEEEE
T ss_pred cC-cEEEECCeeEEEEEEEeECC--CCceeEEEEEEccCCcCceECCCCEEccCCCCcccCccceeEEEE-CCEEEEEEE
Confidence 46 77767766 8999876532 2233589999999999999874 7899999999999999999875 889999999
Q ss_pred ccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCC-CcCCCCCCCCCEEEEeC-CCCeEEEEEeeecCCccEEEE
Q 010428 137 GIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAM-NQINTSSFRDPTTAWLG-PDKRWRVIIGSKINRKGLAIL 214 (511)
Q Consensus 137 g~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~-~~~~~~~fRDP~vvw~~-~~g~w~m~~ga~~~~~G~i~l 214 (511)
+.+. ....+++|+|+|. .+|+|.. +++..... .......-+|-. +|.+ .+|+|+|+.+ .+.|.+
T Consensus 110 a~~~-~~~~~~la~s~D~-----~~~~r~g--~~~~~~~~~~~~~~~~~kd~~-lfp~ki~Gky~m~~r-----~~~i~l 175 (312)
T PF04041_consen 110 AYSG-KGPRIGLATSKDF-----KHWERHG--KIFPPFNGNEDYRDFWSKDGA-LFPEKINGKYAMLHR-----DPSIWL 175 (312)
T ss_dssp EEES-SSEEEEEEEESSS-----SSEEEEE--CTTTTTCTS-EEEEEEEECCE-EEESEETTEEEEEEE-----SSSBEE
T ss_pred EecC-CCcccceEEccch-----HhhEEec--cccCcccccccccccccCceE-EEEEEECCEEEEEEC-----CCCEEE
Confidence 9874 4467899999984 8999974 33322100 011111225654 4443 3899999998 356899
Q ss_pred EEcCCCCCcEEcccccccCCCCCceec
Q 010428 215 YRSKDFVHWIKAKHPLHSVKGTGMWEC 241 (511)
Q Consensus 215 y~S~Dl~~W~~~~~~l~~~~~~g~wEC 241 (511)
..|+|+++|+....++.. ...++||+
T Consensus 176 a~S~Dl~~W~~~~~~~~~-~~~~~~d~ 201 (312)
T PF04041_consen 176 AYSPDLIHWGNHREPLLS-PRPGWWDS 201 (312)
T ss_dssp EEESSSSSEEEEBETSB---STTSSCS
T ss_pred EecCCccccccccccccc-CCCCcChh
Confidence 999999999876554443 23456777
|
On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B. |
| >cd08983 GH43_4 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.39 E-value=4.9e-11 Score=120.58 Aligned_cols=184 Identities=15% Similarity=0.114 Sum_probs=121.7
Q ss_pred CCCccCCcceEEE--CCEEEEEeeeCCCCCCC-CCcEEEEEEeCCCCcceecCCCCCCCCCccCCCeEeeeEEEcC-CCc
Q 010428 55 KNWINDPNGVMIY--KGIYHLFYQYNPKGAVW-GNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILP-GEK 130 (511)
Q Consensus 55 ~gw~NDPnG~~~~--~G~YHLFYQ~~P~~~~~-g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D~~g~~SGsav~~~-dg~ 130 (511)
.+-+.||. +++. +|+||||+.-.-....+ +...+.+++|+||+||+..+.++.... ...++|.+.++.++ +|+
T Consensus 15 ~~~~rDP~-I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~--~~~~~WAPev~~d~~~g~ 91 (276)
T cd08983 15 TKGLRDPF-ILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPP--NAGNTWAPEAFWDAERGQ 91 (276)
T ss_pred CCCccCCe-EEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCC--CcCcEeCccceEcCCCCe
Confidence 35577994 6676 89999999865322212 356799999999999999887642211 23678999998754 689
Q ss_pred eEEEEeccCCC---CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecC
Q 010428 131 PAIFYTGIDPH---NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN 207 (511)
Q Consensus 131 ~~l~YTg~~~~---~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~ 207 (511)
++|+|+..... ....+.+.++.. .| +.+|++. .|++.+. ....|+.+ ++ .+|+|||++....
T Consensus 92 y~~~~s~~~~~~~~~~~~~~i~~~tt-~D--f~tft~p--~~~~~~~-------~~~ID~~v-~~-~~g~~Yl~~k~~~- 156 (276)
T cd08983 92 YVVYWSSRLYDNTGGFYNYRLYATTT-SD--FVTFTEP--KVWIDLG-------ANVIDTTV-VK-VGGTYYRFYKNEG- 156 (276)
T ss_pred EEEEEecccCCCCCCCccEEEEEEec-Cc--ccccCCC--eEeecCC-------CCeEeeEE-EE-eCCEEEEEEecCC-
Confidence 99999986542 122333333321 11 3688752 4666422 24689985 45 3599999997543
Q ss_pred CccEEEEEEcCCCC-CcEEcccccccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEee
Q 010428 208 RKGLAILYRSKDFV-HWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSL 272 (511)
Q Consensus 208 ~~G~i~ly~S~Dl~-~W~~~~~~l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~ 272 (511)
...|.+.+|++|. .|+...... .......|-|.+|+.+..| +|+|+++.
T Consensus 157 -~~~i~~~~s~~l~g~~~~~~~~~--~~~~~~~EgP~v~k~~~~~-------------~y~L~~d~ 206 (276)
T cd08983 157 -SKDIELARSKSLTGPWTIVGTGD--AGWGGAVEGPTVFKLNNGG-------------GWYLYGDN 206 (276)
T ss_pred -CCcEEEEEeCCCCCCceEecccc--cCCCCceeCCeEEEECCCC-------------EEEEEEEE
Confidence 2457888999987 787654321 1223478999999998322 78887754
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08988 GH43_ABN Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.35 E-value=6.9e-11 Score=119.52 Aligned_cols=180 Identities=19% Similarity=0.218 Sum_probs=117.3
Q ss_pred cCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCc-------cCCCeEeeeEEEcCCCce
Q 010428 59 NDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQS-------DINGCWSGSATILPGEKP 131 (511)
Q Consensus 59 NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~-------D~~g~~SGsav~~~dg~~ 131 (511)
.|| .++.++|+|+||.... .+..++|+||+||+..+.+|.+...+ ...++|.+.++. .+|++
T Consensus 1 ~DP-~vi~~~~~YY~~~T~~---------g~~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~G~y 69 (279)
T cd08988 1 HDP-VIIKEGDTWYVFGTGP---------GITILSSKDLVNWTYSGSAFATEPTWKKRVPPSFDGHLWAPDIYQ-HNGKF 69 (279)
T ss_pred CCC-EEEEECCEEEEEEecC---------CEEEEECCCcCCccccCccccCCCccccccCCCCCCCEecceEEE-ECCEE
Confidence 389 5788999999997642 37789999999999999888643322 235799999876 58999
Q ss_pred EEEEeccCC-CCcceEEEEEecCCCCccc-ceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCc
Q 010428 132 AIFYTGIDP-HNRQVQNLAVPKNLSDPYL-REWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRK 209 (511)
Q Consensus 132 ~l~YTg~~~-~~~q~q~lA~s~d~~d~~l-~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~ 209 (511)
+|+|++... .....+++|+|++..+|+- ..|++ ..+++... .. ....-.||.+++ ++||++||+.|+.. .
T Consensus 70 ylyys~~~~~~~~~~igva~s~~p~Gp~~~~~w~~--~~~i~~~~--~~-~~~~~iDp~~f~-DdDG~~Yl~~g~~~--~ 141 (279)
T cd08988 70 YLYYSVSAFGSNTSAIGLAVNKTIDGPSPDYGWEK--GGVVISSD--AS-DNYNAIDPAIIF-DQHGQPWLSFGSFW--G 141 (279)
T ss_pred EEEEEeccCCCCCceEEEEEcCCCCCCCcCcCccc--cCceEecC--CC-CCCCccCCceEE-cCCCCEEEEecccC--C
Confidence 999998643 2346788999988765531 12443 24666432 11 112347998654 47899999998632 2
Q ss_pred cEEEEEE-cCCCCCcEEccc--ccccC-CCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 010428 210 GLAILYR-SKDFVHWIKAKH--PLHSV-KGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (511)
Q Consensus 210 G~i~ly~-S~Dl~~W~~~~~--~l~~~-~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~ 273 (511)
| |.+.+ +.|...-...+. .+... ......|-|-+++.+ | +++|..|..
T Consensus 142 g-i~~~eL~~d~~~~~~~~~~~~i~~~~~~~~~~Egp~i~k~~--g-------------~YYl~~S~g 193 (279)
T cd08988 142 G-IKLFELDKDTMKPAEPGELHSIAGRERSSAAIEAPFILYRG--D-------------YYYLFVSFG 193 (279)
T ss_pred C-EEEEEECcccCCccCCCcceEEeccCCCCCceEeeEEEEcC--C-------------eEEEEEEcC
Confidence 2 44444 555443210111 11111 123468999999987 6 888888764
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla |
| >cd08981 GH43_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.34 E-value=8.6e-11 Score=119.67 Aligned_cols=151 Identities=20% Similarity=0.225 Sum_probs=100.0
Q ss_pred CCccCCcceEEE--CCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCC-CccCCCeEeeeEEEcCCCceE
Q 010428 56 NWINDPNGVMIY--KGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQ-QSDINGCWSGSATILPGEKPA 132 (511)
Q Consensus 56 gw~NDPnG~~~~--~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~-~~D~~g~~SGsav~~~dg~~~ 132 (511)
.++-||. ++++ +|+||||..............+...+|+||+||+..+.++.+.. .+...++|.+.++. .+|++|
T Consensus 4 ~~~~DP~-v~~~~~~g~yYl~~T~~~~~~~~~~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~~-~~G~yy 81 (291)
T cd08981 4 IRIRDPF-ILADPETGTYYLYGTTDPNIWGGEGTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVHE-YKGRYY 81 (291)
T ss_pred ccccCCE-EEEECCCCEEEEEEecCccccccCCCcEEEEECCChhcccccceeeccCCCcCccccccCCeeee-eCCEEE
Confidence 4578995 7777 99999999865332111123589999999999999998886543 34456799999875 599999
Q ss_pred EEEeccCCC-CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeec--CCc
Q 010428 133 IFYTGIDPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI--NRK 209 (511)
Q Consensus 133 l~YTg~~~~-~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~--~~~ 209 (511)
|+|+..... ....+++|++++..+ .|+.....|+.... ....||.+ |.++||++||+++..- ...
T Consensus 82 ly~s~~~~~~~~~~~~va~s~~p~G----P~~~~~~~~~~~~~-------~~~iDp~~-f~DdDG~~Yl~~~~~~~~~~~ 149 (291)
T cd08981 82 MFATFHNPGGERRGTAILVSDSPEG----PFVPHSDGPVTPED-------WMCLDGTL-YVDEDGKPWMVFCHEWVQVYD 149 (291)
T ss_pred EEEEeccCCCceeeEEEEECCCCCC----CCEeCCCCccCCCC-------CceEcCce-EEcCCCCEEEEEEecccccCC
Confidence 999876432 223567888877643 47654333443211 13579985 5557899999987421 112
Q ss_pred cEEEEEE-cCCC
Q 010428 210 GLAILYR-SKDF 220 (511)
Q Consensus 210 G~i~ly~-S~Dl 220 (511)
|.|.+.+ +.|.
T Consensus 150 ~~i~~~eL~~d~ 161 (291)
T cd08981 150 GTIEAVRLSPDL 161 (291)
T ss_pred CCEEEEEeCCCc
Confidence 3354444 4554
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J | Back alignment and domain information |
|---|
Probab=99.32 E-value=3.3e-11 Score=120.12 Aligned_cols=137 Identities=21% Similarity=0.297 Sum_probs=98.5
Q ss_pred CCccCCcceEEEC-CEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCC-------CCCCccCCCeEeeeEEEcC
Q 010428 56 NWINDPNGVMIYK-GIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIY-------PSQQSDINGCWSGSATILP 127 (511)
Q Consensus 56 gw~NDPnG~~~~~-G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~-------P~~~~D~~g~~SGsav~~~ 127 (511)
+.+.||. +++.+ |+|||||+..... ......+++|+|+|+++|+..+..+. +...++...+.++.++..+
T Consensus 64 ~~~~~p~-v~~~~dg~~~~~Yt~~~~~-~~~~~~i~~A~S~D~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~dP~v~~~~ 141 (276)
T cd08979 64 GGVWTPS-VVRDPDGTYRMFYTGYDRP-KGAVQRIGLATSKDLIHWTKHGPNPVPRWYESGNPGPWDDHAWRDPAVVRDE 141 (276)
T ss_pred CCeEcce-EEEcCCCeEEEEEecccCC-CCCcceEEEEECCCCCceEECCCCcceeeeecCCCCCcccccccccEEEEEC
Confidence 4567895 66777 9999999977532 23457899999999999999876542 2233445667889988754
Q ss_pred C-CceEEEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeee
Q 010428 128 G-EKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSK 205 (511)
Q Consensus 128 d-g~~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~ 205 (511)
+ |+++|+|++........+.+|.|+|. .+|++....+.+. .+.....+++|.+ ++ .+|+|+|++++.
T Consensus 142 ~~g~y~m~~~~~~~~~~~~i~~a~S~D~-----~~W~~~~~~~~~~----~~~~~~~~e~P~~-~~-~~g~~~l~~~~~ 209 (276)
T cd08979 142 EGGGWRMYYGARDADERGAIGLATSPDL-----IHWTPVPPPPGPR----TGYDDGQLEVPQV-VK-IDGRWYLLYSGR 209 (276)
T ss_pred CCCEEEEEEEeEccCCCcEEEEEECCCC-----CcceECCCCCCCC----CcccCCcCccceE-EE-ECCEEEEEEEec
Confidence 3 89999999875445567889999884 7999864332121 2223456889995 55 469999999876
|
This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta |
| >cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins | Back alignment and domain information |
|---|
Probab=99.28 E-value=2e-10 Score=118.89 Aligned_cols=169 Identities=19% Similarity=0.226 Sum_probs=114.6
Q ss_pred cCCcceEEECCEEEEEeeeCCCC-CCCCCcEEEEEEeCCCC-cceecC-CCCCCCC------------------CccCCC
Q 010428 59 NDPNGVMIYKGIYHLFYQYNPKG-AVWGNIVWAHSTSKDLI-NWIPHD-PAIYPSQ------------------QSDING 117 (511)
Q Consensus 59 NDPnG~~~~~G~YHLFYQ~~P~~-~~~g~~~WgHa~S~DLv-hW~~~~-~aL~P~~------------------~~D~~g 117 (511)
..| .+++++|+|||||+..-.. ..-...+.|.|+|+|.. .|+++. ++|.|.. .||..+
T Consensus 113 waP-~Vi~~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~GpWtr~d~Pil~p~~dg~w~~d~~~~~~~~~~g~wD~~~ 191 (349)
T cd08992 113 FTP-EVLEHEGTYYLVYQVVKSPYLNRSFESIAMAVADSPYGPWTKSDEPILSPSNDGIWKGDEDNRFLVKKKGSFDSHK 191 (349)
T ss_pred ECc-EEEEECCEEEEEEEecccccCCCCcceEEEEEECCcccccccCCCcEecCCcCCceeeccCceeEeccCCCcccCc
Confidence 457 4778999999999954211 11123578888888876 699774 5566642 367778
Q ss_pred eEeeeEEEcCCCceEEEEeccCC-------CCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEE
Q 010428 118 CWSGSATILPGEKPAIFYTGIDP-------HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTA 190 (511)
Q Consensus 118 ~~SGsav~~~dg~~~l~YTg~~~-------~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vv 190 (511)
+...+++. .+|+++|||+|+.. ...+.+++|+|++..+| |+|.+.|||+... + ..+ |
T Consensus 192 v~~P~v~~-~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~GP----f~r~~~nPi~~~~--------~--~~~-~ 255 (349)
T cd08992 192 VHDPCLFP-FNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPEGP----YVKSPYNPITNSG--------H--ETC-V 255 (349)
T ss_pred eECCEEEE-ECCEEEEEEEccccCcccccCCCCceEEEEEECCCCCC----CEeCCCCcccCCC--------C--ceE-E
Confidence 88888765 59999999999753 23567999999987654 8898889998533 1 125 7
Q ss_pred EeCCCCeE-EEEEeeecCCccEEEEEEcCCCCCcEEcccccccCCCCCceecCceEEec
Q 010428 191 WLGPDKRW-RVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVS 248 (511)
Q Consensus 191 w~~~~g~w-~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~g~wECPdlf~l~ 248 (511)
|+. .+.+ .|+..- ..+.|. +..|+|.++|+....+-..+...|..+|||-+.-.
T Consensus 256 ~~~-~~~~~~~~~~d-~~~~~~--~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (349)
T cd08992 256 WQY-KGGIAAMLTTD-GPEKNT--IQFAPDGINFEIMAHIKGAPEAIGPYRRPDADEDP 310 (349)
T ss_pred Eec-CCceEEEEecc-CCCCce--EEeCCCCccEEEeeeccCCCccccCccCcccccCC
Confidence 984 4556 555433 233454 67899999999765432223345667777776654
|
This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=99.25 E-value=4.3e-10 Score=113.21 Aligned_cols=174 Identities=17% Similarity=0.185 Sum_probs=113.6
Q ss_pred CCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCc------cCCCeEeeeEEEcCCC
Q 010428 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQS------DINGCWSGSATILPGE 129 (511)
Q Consensus 56 gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~------D~~g~~SGsav~~~dg 129 (511)
+..-|| .+++++|+|+||+..... ...+...+|+||+||+..+.++...... ...++|.+.++. .+|
T Consensus 6 ~~~~DP-~ii~~~~~yY~~~t~~~~-----~~g~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~G 78 (269)
T cd08989 6 GDNPDP-SIIRAGDDYYMASSTFEW-----FPGVQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIWAPCLSY-YDG 78 (269)
T ss_pred CCCCCC-cEEEECCeEEEEECcccc-----CCCcEEEECCccCCCEEccccccCccccccccCCCCCcEEcceEEE-ECC
Confidence 556799 578899999999864321 1135678999999999998877543211 235799999876 599
Q ss_pred ceEEEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCc
Q 010428 130 KPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRK 209 (511)
Q Consensus 130 ~~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~ 209 (511)
+++|+|+.........+++|++++..+| |+. |+... ..-.||.+ |.++||+.||+.+..
T Consensus 79 ~yy~yy~~~~~~~~~~i~va~sd~~~Gp----w~~----~~~~~--------~~~IDp~~-f~D~dG~~Yl~~~~~---- 137 (269)
T cd08989 79 KFWLIYTAVKVWKDCHNYLFTAEDITGP----WSR----PIFLN--------YGGFDPSL-FHDDDGKKYLINMGW---- 137 (269)
T ss_pred EEEEEEeccccCCCceEEEEEECCCCCC----CcC----CEECC--------CCcccCce-EEcCCCCEEEEecCC----
Confidence 9999999864434456889998776433 542 43321 13479985 455799999998753
Q ss_pred cEEEEEE-cCCCCCcEEcccc----cccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCC
Q 010428 210 GLAILYR-SKDFVHWIKAKHP----LHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD 274 (511)
Q Consensus 210 G~i~ly~-S~Dl~~W~~~~~~----l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~ 274 (511)
+.|.+.+ +.|...= .+.+ +.........|-|-+++.+ | +++|++|...
T Consensus 138 ~~i~l~~l~~~~~~~--~~~~~~~~~~~~~~~~~~Egp~~~k~~--G-------------~YYl~~S~~~ 190 (269)
T cd08989 138 SGIRLQEYSPAEKKL--IGKPLNKVIIKGTDDGLTEGPHLYKIN--G-------------KYYLTTAEGG 190 (269)
T ss_pred CcEEEEEEChhhCCC--CCCceeEEEecCCCCCccccceEEEEC--C-------------EEEEEEeeCC
Confidence 2244544 3332210 1111 1111123478999999987 6 8888888654
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended |
| >cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=99.19 E-value=1e-09 Score=110.40 Aligned_cols=169 Identities=15% Similarity=0.087 Sum_probs=112.0
Q ss_pred CCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCC-----------ccCCCeEeeeEE
Q 010428 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQ-----------SDINGCWSGSAT 124 (511)
Q Consensus 56 gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~-----------~D~~g~~SGsav 124 (511)
++.-|| .+++++|+|+||....-. ...+...+|+||+||+..+.++..... .-..++|.+.++
T Consensus 9 ~~~~DP-~v~~~~~~yY~~~t~~~~-----~~gi~v~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~WAP~v~ 82 (269)
T cd09001 9 ADYPDP-DVIRVGDDYYMVSTTMHY-----SPGAPILHSKDLVNWEIIGYVYDRLDDGDAYNLENGGNAYGKGQWAPSLR 82 (269)
T ss_pred CCCCCC-eEEEECCEEEEEECCccc-----CCCCEEEEcccccCCeEcccccccccccccccccccCCCCCCCEECCceE
Confidence 556799 578899999999864311 123667899999999999877643211 112579999987
Q ss_pred EcCCCceEEEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEee
Q 010428 125 ILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGS 204 (511)
Q Consensus 125 ~~~dg~~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga 204 (511)
.. +|+++|+|+... ..+.+|++++..+ .|+.. +++ ....||.++ .+++|+.||+.+.
T Consensus 83 ~~-~gkyy~yys~~~----~~~~v~~a~~p~G----pw~~~--~~~-----------~~~iDp~~f-~D~dG~~Yl~~~~ 139 (269)
T cd09001 83 YH-NGTFYVFFCTNT----GGTYIYTADDPEG----PWTKT--ALD-----------GGYHDPSLL-FDDDGTAYLVYGG 139 (269)
T ss_pred EE-CCEEEEEEEecC----CCeEEEEcCCCCC----CCcCC--CcC-----------CCcccCceE-EcCCCCEEEEeCC
Confidence 64 999999999862 3578888876532 35432 111 135799954 4578999999975
Q ss_pred ecCCccEEEEEE-cCCCCCcEEcccccccCC--CCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 010428 205 KINRKGLAILYR-SKDFVHWIKAKHPLHSVK--GTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (511)
Q Consensus 205 ~~~~~G~i~ly~-S~Dl~~W~~~~~~l~~~~--~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~ 273 (511)
. .+.+.+ +.|+....-....+.... .....|-|.+++-+ | +++|++|..
T Consensus 140 ~-----~i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~Egp~i~k~~--G-------------~YYl~~S~~ 191 (269)
T cd09001 140 G-----TIRLVELSPDLTGVGGKDQVIIDAGEEIGLGAEGSHLYKIN--G-------------YYYIFNIAW 191 (269)
T ss_pred C-----cEEEEEECcccCCcCCCceEEEeCCCccccccccCeEEEEC--C-------------EEEEEEecC
Confidence 3 345555 677766521111122221 13578999999876 6 888888865
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend |
| >cd08986 GH43_7 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.2e-09 Score=109.91 Aligned_cols=177 Identities=18% Similarity=0.115 Sum_probs=111.7
Q ss_pred CccCCcceEEE-CCEEEEEeeeCCCCCC-----CCCcEEEEEEeCCCCcceecCCCCCCCCC------------ccCCCe
Q 010428 57 WINDPNGVMIY-KGIYHLFYQYNPKGAV-----WGNIVWAHSTSKDLINWIPHDPAIYPSQQ------------SDINGC 118 (511)
Q Consensus 57 w~NDPnG~~~~-~G~YHLFYQ~~P~~~~-----~g~~~WgHa~S~DLvhW~~~~~aL~P~~~------------~D~~g~ 118 (511)
||-||. ++.. +|+|+|+......+.. ......-.++|+||+||+..+.++..... ....++
T Consensus 1 ~~rDP~-v~~~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~ 79 (269)
T cd08986 1 WIRDTY-VTLGPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAV 79 (269)
T ss_pred CCcCCe-EEecCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCc
Confidence 688995 5555 6799999885432210 01235678999999999999887754321 234679
Q ss_pred EeeeEEEcCCCceEEEEeccCCC-CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCe
Q 010428 119 WSGSATILPGEKPAIFYTGIDPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKR 197 (511)
Q Consensus 119 ~SGsav~~~dg~~~l~YTg~~~~-~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~ 197 (511)
|.+.+.. .+|+++|+|+..... ....+++|++++..+ .|+....+ .+ . ..-.||.+ +.++||+
T Consensus 80 WAP~v~~-~~g~yyl~~s~~~~~~~~~~i~va~a~~p~G----p~~~~~~~----~~---~---~~~iD~~~-f~D~DG~ 143 (269)
T cd08986 80 WAPELHY-IKGRWYLVACMNNPGYGGSSILLSTSGKIEG----PYKHITGN----KP---L---FPGIDPSL-FEDDDGK 143 (269)
T ss_pred CCceEEE-ECCEEEEEEEccCCCCCceEEEEEeCCCCCC----CcEeccCC----CC---C---CCccCCce-EEcCCCC
Confidence 9999876 489999999976432 334567787766543 36653221 01 0 12469985 5557899
Q ss_pred EEEEEeeecCCccEEEEEEcCCCCCcEEcccc--cccC----CCCCceecCceEEeccCCCCCccccCCCCCceeEEEEe
Q 010428 198 WRVIIGSKINRKGLAILYRSKDFVHWIKAKHP--LHSV----KGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVS 271 (511)
Q Consensus 198 w~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~--l~~~----~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S 271 (511)
+||+.+... + .--+.|+.... +.+ +... ......|-|-+++.+ | +++|++|
T Consensus 144 ~Yl~~~~~~-----i-~~l~~d~~~~~--~~~~~~~~~~~~~~~~~~~EgP~i~k~~--G-------------~YYL~yS 200 (269)
T cd08986 144 VYLVWHNTL-----I-ARLKDDLSGLA--GDPVRIDPSPTFYKDEIGHEGAFVFKYG--G-------------KYYLFGT 200 (269)
T ss_pred EEEEeeCCc-----e-EeccCcccccc--CCcEEEecccccccCCccccccEEEEEC--C-------------EEEEEEe
Confidence 999987531 1 11255655432 221 1111 012357999999986 5 8899988
Q ss_pred eC
Q 010428 272 LD 273 (511)
Q Consensus 272 ~~ 273 (511)
..
T Consensus 201 ~~ 202 (269)
T cd08986 201 AW 202 (269)
T ss_pred ec
Confidence 64
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08980 GH43_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.10 E-value=4.7e-09 Score=106.43 Aligned_cols=188 Identities=14% Similarity=0.127 Sum_probs=119.3
Q ss_pred CCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCC--CCCC-CccCCCeEeeeEEEcCCCceEEEEe
Q 010428 60 DPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAI--YPSQ-QSDINGCWSGSATILPGEKPAIFYT 136 (511)
Q Consensus 60 DPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL--~P~~-~~D~~g~~SGsav~~~dg~~~l~YT 136 (511)
|| -++.++++|+||+.-.. .....++|+||+||+.....+ .+.. .....++|.+.++. .+|+++|+|+
T Consensus 2 DP-~v~~~~d~yY~~~T~~~-------~~~~i~~S~dl~~w~~~~~~~~~~~~~~~~~~~~~WAP~i~~-~~g~yylyys 72 (288)
T cd08980 2 DP-WVIRHDGYYYFTATTGE-------DRIELRRSDTLAGLATAESKVVWTPPDSGPYSGNLWAPELHY-IDGKWYIYFA 72 (288)
T ss_pred CC-eEEEECCEEEEEEEeCC-------CcEEEEecCChhHhhcCCcEEEecCCCCCCccccEECceEEE-ECCEEEEEEE
Confidence 89 47788999999987431 357889999999999875432 2222 13446899999876 5899999999
Q ss_pred ccCC--CCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecC---CccE
Q 010428 137 GIDP--HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN---RKGL 211 (511)
Q Consensus 137 g~~~--~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~---~~G~ 211 (511)
.... ...+.+++|.+++..++ +-.|+.. .+++... . ..-.||.+ +. ++|++||+++.... ....
T Consensus 73 ~~~~~~~~~~~~~v~~a~~~~~~-~Gpw~~~--~~~~~~~--~----~~~iDp~~-~~-ddG~~Yl~~~~~~~~~~~~~~ 141 (288)
T cd08980 73 AGDGGGNANHRMYVLENAGADPP-TGPWTFK--GRLADPT--D----RWAIDGTV-FE-HNGQLYFVWSGWEGRTNGNQN 141 (288)
T ss_pred ccCCCCCcceeEEEEEeCCCCCC-CCCceEe--eEeccCC--C----CeeeeeEE-EE-ECCEEEEEEEccCCCCCCCcc
Confidence 8653 24456778887652122 3568864 3444221 1 12369985 55 35999999876432 2234
Q ss_pred EEEEEcCCCCCcEEcccc--cccCCC------CCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCCCceeEEEEE
Q 010428 212 AILYRSKDFVHWIKAKHP--LHSVKG------TGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVG 283 (511)
Q Consensus 212 i~ly~S~Dl~~W~~~~~~--l~~~~~------~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~~~~~~Y~iG 283 (511)
|.+.+.++...+. +++ +..+.. ....|-|.+++.+ | +++|.+|........|.+|
T Consensus 142 i~~~~l~~~~~~~--g~~~~i~~p~~~we~~~~~~~EgP~~~k~~--G-------------~yYl~yS~~~~~~~~Y~v~ 204 (288)
T cd08980 142 LYIAKMSNPWTLT--GPRVLISRPEYDWERQGPGVNEGPAALKRN--G-------------KVFLTYSASGSWTPDYCLG 204 (288)
T ss_pred EEEEECCCCCccC--CcceEecCCCCCceecCceeeECcEEEEEC--C-------------EEEEEEECCCCCCCCCEEE
Confidence 6666655543443 322 222111 1457999999997 6 8889888754434456665
Q ss_pred E
Q 010428 284 T 284 (511)
Q Consensus 284 ~ 284 (511)
-
T Consensus 205 ~ 205 (288)
T cd08980 205 L 205 (288)
T ss_pred E
Confidence 4
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=99.09 E-value=4.4e-09 Score=106.56 Aligned_cols=121 Identities=17% Similarity=0.205 Sum_probs=85.4
Q ss_pred CccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEEEe
Q 010428 57 WINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYT 136 (511)
Q Consensus 57 w~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~l~YT 136 (511)
..-|| .+++.+|+|+|+..-.. ....+.-.+|+||+||+..+.++.+. ..++|.+.++. .+|+++|+|+
T Consensus 14 ~~~DP-~i~~~~~~yY~~~t~~~-----~~~gi~i~~S~DL~~W~~~g~~~~~~----~~~~WAP~i~~-~~gkyy~yys 82 (280)
T cd09002 14 DYPDP-SILRDGEDYYMTHSSFK-----YTPGLVIWHSRDLVNWTPVGPALPEY----EGDVWAPDLCK-YDGRYYIYFP 82 (280)
T ss_pred CCCCC-EEEEECCEEEEEEcchh-----cCCCEEEEECCCcCCceEccccccCC----CCCEEcCeeEE-ECCEEEEEEE
Confidence 34599 58889999999765211 11247788999999999998877542 35799999875 6999999999
Q ss_pred ccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEee
Q 010428 137 GIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGS 204 (511)
Q Consensus 137 g~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga 204 (511)
.........+.+|++++..+ .|++ |+.... ....||.+++ +++|++||+.+.
T Consensus 83 ~~~~~~~~~~~va~ad~p~G----pw~~----~~~~~~-------~~~IDp~vf~-DddG~~Yl~~~~ 134 (280)
T cd09002 83 AIPEGGNWTNMVIWADSPEG----PWSK----PIDLKI-------GGCIDPGHVV-DEDGNRYLFLSG 134 (280)
T ss_pred eecCCCCceEEEEEECCCCC----CCcC----CEecCC-------CCccCCceEE-cCCCCEEEEECC
Confidence 87644456778898876543 3653 221111 1236999655 478999999864
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs |
| >cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function | Back alignment and domain information |
|---|
Probab=99.04 E-value=3e-09 Score=106.80 Aligned_cols=100 Identities=13% Similarity=0.181 Sum_probs=75.6
Q ss_pred eeEEEcCCCceEEEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEE
Q 010428 121 GSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRV 200 (511)
Q Consensus 121 Gsav~~~dg~~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m 200 (511)
..++. .+|+++|+|++...+....+++|+|+|+ ++|++.+ +|+|.++....++...++||.|+ + .+|+|||
T Consensus 3 P~v~~-~~G~y~l~y~~~~~~~~~~ig~A~S~Dg-----~~~~~~~-~~~i~p~~~~~~~~~gv~dP~v~-~-~~g~y~m 73 (268)
T cd08993 3 PAVVY-DNGEFYLLYRAAGNDGVIRLGLARSRDG-----LHFEIDP-DPPVWPPPEDGFEEGGVEDPRIV-K-IDDTYYI 73 (268)
T ss_pred CeEEE-ECCEEEEEEEEECCCCceEEEEEEECCC-----ceEEECC-cceEcCCCCCcccccCccCcEEE-E-ECCEEEE
Confidence 45655 5999999999876556678999999985 7999975 45553321134556778999965 4 5889999
Q ss_pred EEeeec--CCccEEEEEEcCCCCCcEEcccc
Q 010428 201 IIGSKI--NRKGLAILYRSKDFVHWIKAKHP 229 (511)
Q Consensus 201 ~~ga~~--~~~G~i~ly~S~Dl~~W~~~~~~ 229 (511)
++++.. ....++.+++|+|+.+|++.+.+
T Consensus 74 ~Yta~~~~~~~~~i~lA~S~D~~~W~~~~~~ 104 (268)
T cd08993 74 TYAARPNAPNGTRIGLATTKDFITFERLGTS 104 (268)
T ss_pred EEEccCCCCCCcEEEEEEeCCcceEEEeccc
Confidence 998865 34567999999999999987643
|
This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >COG2152 Predicted glycosylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.2e-08 Score=100.21 Aligned_cols=153 Identities=20% Similarity=0.282 Sum_probs=112.4
Q ss_pred cCCcceEEECCEEEEEeeeCC--CCCCCCCcEEEEEEeCCCCc-ceecC-CCCCC-CCCccCCCeEeeeEEEcCCCceEE
Q 010428 59 NDPNGVMIYKGIYHLFYQYNP--KGAVWGNIVWAHSTSKDLIN-WIPHD-PAIYP-SQQSDINGCWSGSATILPGEKPAI 133 (511)
Q Consensus 59 NDPnG~~~~~G~YHLFYQ~~P--~~~~~g~~~WgHa~S~DLvh-W~~~~-~aL~P-~~~~D~~g~~SGsav~~~dg~~~l 133 (511)
-.| ++++.++++||+|+--- +...-...|.+-|.|+|+++ |+-.+ +.+.| ..++|.-||..+.++.. +++++|
T Consensus 32 FNp-av~~~~~~~~~l~Rv~~~yye~~~~~s~l~ia~s~dgi~~~~~e~ep~~~P~~~~~e~~G~EDPRvt~I-~~~y~m 109 (314)
T COG2152 32 FNP-AVVLVGGELLLLYRVVEGYYEDHSSISHLRIARSDDGIGEFEIEPEPTLWPANYPYEIYGIEDPRVTKI-GGRYYM 109 (314)
T ss_pred ecc-eeEEECCEEEEEEEEeccccccCccceEEEEEecccCCCceecCCcceEecCCCchhhhcccCceEEEE-CCEEEE
Confidence 356 78999999999999711 01112456899999999999 99764 78899 66788899999999875 899999
Q ss_pred EEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEe-CCCCeEEEEEeeecC---Cc
Q 010428 134 FYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWL-GPDKRWRVIIGSKIN---RK 209 (511)
Q Consensus 134 ~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~-~~~g~w~m~~ga~~~---~~ 209 (511)
.|||.+ +..+..++|+++|- .+|+|.+ +++.+ +.||-. ++. .-+|+|.|+---... ..
T Consensus 110 tYTa~s-~~g~~~~la~t~~f-----~n~~rig--~i~~p---------dn~~~~-lfP~~~ngk~~~lhr~~~~~~~~~ 171 (314)
T COG2152 110 TYTAYS-DKGPRLALAVTKDF-----LNWERIG--AIFPP---------DNKDAA-LFPKKINGKYALLHRPVLGEYGMK 171 (314)
T ss_pred EEEecC-CCCcccchhhhhhh-----hhhhhcc--cccCC---------CCCCce-EeeEEecCcEEEEEeecccccCcc
Confidence 999985 45677899998884 7899862 44432 245543 232 136899988653321 25
Q ss_pred cEEEEEEcCCCCCcEEcccccc
Q 010428 210 GLAILYRSKDFVHWIKAKHPLH 231 (511)
Q Consensus 210 G~i~ly~S~Dl~~W~~~~~~l~ 231 (511)
+-|++..|.|+.+|.....++.
T Consensus 172 ~niwia~S~dl~~w~~~~~~l~ 193 (314)
T COG2152 172 GNIWIAFSPDLEHWGIHRKLLG 193 (314)
T ss_pred CceEEEEcCCccCCCccceeec
Confidence 6799999999999987655443
|
|
| >cd08982 GH43_3 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.93 E-value=6.3e-08 Score=98.94 Aligned_cols=171 Identities=18% Similarity=0.173 Sum_probs=103.8
Q ss_pred ccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEEEec
Q 010428 58 INDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTG 137 (511)
Q Consensus 58 ~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~l~YTg 137 (511)
..||. +++++|+|+||-.... +..+|+||++|+..+.++. ..++|.+++.. .+|++|++|+.
T Consensus 3 ~~DP~-i~~~~g~YY~~~T~~~----------~i~~S~DL~~W~~~g~~~~------~~~~WAP~i~~-~~g~~Y~~~~~ 64 (295)
T cd08982 3 AADPV-VILFKGEYYLFASMSG----------GYWHSSDLIDWDFIPTNSL------PDEGYAPAVFV-YDGTLYYTAST 64 (295)
T ss_pred CCCCe-EEEECCEEEEEEeCCC----------CeEECCCcCCceECCcccC------CCCcCcCEEEE-ECCEEEEEEeC
Confidence 36994 7789999999866421 2578999999999987763 46799999876 58887766653
Q ss_pred cCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCccEEEEEE-
Q 010428 138 IDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYR- 216 (511)
Q Consensus 138 ~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~ly~- 216 (511)
. .+.+|+|++..++ -|+.. +. . . .....||.+ |.++||++||+.|.... .+ |.+.+
T Consensus 65 ~------~~~v~~s~~p~gp---~w~~~----~~--~--~---~~~~IDp~v-f~DdDGk~Yl~~g~~~~-~~-i~~~eL 121 (295)
T cd08982 65 Y------NSRIYKTADPLSG---PWEEV----DK--S--F---PPGLADPAL-FIDDDGRLYLYYGCSNN-YP-LRGVEV 121 (295)
T ss_pred C------CceEEEeCCCCCC---Ccccc----cc--c--c---CCCccCCce-EECCCCCEEEEEecCCC-CC-eEEEEE
Confidence 2 2357888765322 25432 10 1 0 123579985 45578999999975321 11 22221
Q ss_pred -----------------cCCCCCcEEcccccccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCCCceeE
Q 010428 217 -----------------SKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEY 279 (511)
Q Consensus 217 -----------------S~Dl~~W~~~~~~l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~~~~~~ 279 (511)
+..-..|+..+.-.......+..|-|-+++.+ | +++|..|........
T Consensus 122 ~~d~~~~~g~~~~l~~~~~~~~~We~~g~~~~~~~~~~~~EGP~i~k~~--G-------------~YYL~yS~~~~~~~~ 186 (295)
T cd08982 122 DPDTFRPIGEPVELIPGNPDKHGWERFGENNDNPDKTPWMEGAWMTKHN--G-------------KYYLQYAAPGTEFNT 186 (295)
T ss_pred CcccCCccCcceEEEeCCCCCcCeEecCcccccccCCccccccEEEEEC--C-------------EEEEEEeCCCcccCc
Confidence 22233455432211111123467899999876 5 888988875433344
Q ss_pred EEEEE
Q 010428 280 YTVGT 284 (511)
Q Consensus 280 Y~iG~ 284 (511)
|.+|-
T Consensus 187 Y~v~~ 191 (295)
T cd08982 187 YADGV 191 (295)
T ss_pred EeEEE
Confidence 55543
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases | Back alignment and domain information |
|---|
Probab=98.89 E-value=9.9e-08 Score=95.68 Aligned_cols=191 Identities=18% Similarity=0.315 Sum_probs=122.8
Q ss_pred ccCCCCC---ccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCC----CCCCccCCCeEeeeE
Q 010428 51 FQPPKNW---INDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIY----PSQQSDINGCWSGSA 123 (511)
Q Consensus 51 f~p~~gw---~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~----P~~~~D~~g~~SGsa 123 (511)
.+|+.|| +.|| -+++++|+||+|-...-. . .|+-+-+. |+||+.++-|+. +.. ...+.|.+.+
T Consensus 14 ~~pk~~~~~~lkDP-tiv~~nGkYyvYgT~~~~-~-----~~~s~~~S-f~~Ws~~g~A~q~~l~~~~--~~~~fwAPqV 83 (303)
T cd08987 14 ISPKSDWIVAIKDP-TVVYYNGRYHVYATTADA-G-----NYGSMYFN-FTDWSQAASATQYYLQNGN--MTGYRVAPQV 83 (303)
T ss_pred ccCCCCCeeeecCC-eEEEECCEEEEEEccCCC-C-----Cceeeeec-ccCHhHhccchhhcccCCC--CCcccccCEE
Confidence 4677899 6899 467899999999876431 2 24333333 999999887652 221 2346788887
Q ss_pred EE-cCCCceEEEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEE
Q 010428 124 TI-LPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVII 202 (511)
Q Consensus 124 v~-~~dg~~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ 202 (511)
+. .+++++||+|+.. ..++|+++|..+|. .|... .|++... ........-|+.| .. ++++.||+.
T Consensus 84 fyf~pk~kwYL~Yq~~------~~~yaTs~dp~~P~--~ws~~--qpl~~~~--~~~~~~~~ID~~v-I~-Dd~~~YLff 149 (303)
T cd08987 84 FYFAPQNKWYLIYQWW------PAAYSTNSDISNPN--GWSAP--QPLFSGT--PNGSPGGWIDFWV-IC-DDTNCYLFF 149 (303)
T ss_pred eeeccCCEEEEEEecC------ceEEEeCCCCCCCC--ccCCC--cccccCc--ccCCCCCccceeE-Ee-CCCCEEEEE
Confidence 62 3689999999952 25689999988874 68753 5776432 1112344689996 34 688899888
Q ss_pred eeecCCccEEEEEEcC-CCCCcEEc-ccc--ccc-CCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCCCce
Q 010428 203 GSKINRKGLAILYRSK-DFVHWIKA-KHP--LHS-VKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKH 277 (511)
Q Consensus 203 ga~~~~~G~i~ly~S~-Dl~~W~~~-~~~--l~~-~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~~~~ 277 (511)
.. ..| .+|+|+ .+.+.... +.. +.. ......+|-|.+++++ | ..++.|+++..+...
T Consensus 150 ~~---dnG--~iyra~~~~~nFp~~~~~~~~~~~~~~~~~lfEa~~Vykv~--G-----------~~~YlmiveA~g~~~ 211 (303)
T cd08987 150 SD---DNG--KLYRSSTTLGNFPNGGTETVIIMSDSNKNNLFEASNVYKVK--G-----------QNQYLLIVEAIGSDG 211 (303)
T ss_pred ec---CCC--eEEEEecchhhCCCCCCccEEEecCCCccccceeeEEEEEC--C-----------CeEEEEEEEecCCCC
Confidence 64 234 467752 22222110 111 111 1224589999999998 5 138999999876534
Q ss_pred eEEEEE
Q 010428 278 EYYTVG 283 (511)
Q Consensus 278 ~~Y~iG 283 (511)
.-|+++
T Consensus 212 ~rYfrs 217 (303)
T cd08987 212 GRYFRS 217 (303)
T ss_pred CCeEEE
Confidence 457777
|
The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr |
| >PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.86 E-value=5.1e-08 Score=102.45 Aligned_cols=192 Identities=20% Similarity=0.235 Sum_probs=119.1
Q ss_pred CCcceEE-ECCEEEEEeeeCCCC----CCCCCcEEEEEEeCCCC----cceecCCCCCCCCCc-cCCCeEeeeEEEcC-C
Q 010428 60 DPNGVMI-YKGIYHLFYQYNPKG----AVWGNIVWAHSTSKDLI----NWIPHDPAIYPSQQS-DINGCWSGSATILP-G 128 (511)
Q Consensus 60 DPnG~~~-~~G~YHLFYQ~~P~~----~~~g~~~WgHa~S~DLv----hW~~~~~aL~P~~~~-D~~g~~SGsav~~~-d 128 (511)
|+.|-+. ++|.--+|-.-.|.. ..|+..|+++.-|++.. +|+..+.++...... ...--|||||++.. |
T Consensus 64 d~~G~~~~~~Gy~vvfaL~a~r~~~~~~Rh~~A~I~~fY~k~G~~~~~~W~~~G~vf~~g~~~~~~s~EWSGSA~l~~~d 143 (428)
T PF02435_consen 64 DADGNVVNYNGYQVVFALTADRHEDPDDRHDDARIYLFYSKDGDNANDGWKNGGPVFPEGASFVPGSREWSGSATLNNDD 143 (428)
T ss_dssp -TTSSBEEBTTEEEEEEEEE-TT--GGGCSCGEEEEEEEEETT--SGGG-EEEEESS-TTCCCCGCEEEEEEEEEESTTT
T ss_pred cccccEEEECCEEEEEEEecCCccCCccccCCcEEEEEEecCCCCccCCceECcccCCCCCCCCccCcEecCceEEcCCC
Confidence 3555433 688777777776653 35678999999999999 999998877555431 12346999999987 8
Q ss_pred CceEEEEeccCC--CC--cceE-----EEEEecCCCCcccceeeecCCCceecCCCCCcC------CCCCCCCCEEEEeC
Q 010428 129 EKPAIFYTGIDP--HN--RQVQ-----NLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQI------NTSSFRDPTTAWLG 193 (511)
Q Consensus 129 g~~~l~YTg~~~--~~--~q~q-----~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~------~~~~fRDP~vvw~~ 193 (511)
|++.||||.... .. .|.. +++.+.+. +.-+..|++. ..++.++. ..| ....||||++ |.+
T Consensus 144 g~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~~-~v~i~g~~~~--~~lfe~DG-~~Yqt~~Q~~~~afRDP~~-f~D 218 (428)
T PF02435_consen 144 GSIQLFYTAVGFSDTPTFRQRLATATLGLIHADDD-GVWITGFSNH--HELFEGDG-KHYQTYEQNPGYAFRDPHV-FED 218 (428)
T ss_dssp SEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECST-EEEEEEEEEE--EEEES--S-SSB--HHHHHH---EEEEE-EEE
T ss_pred CeEEEEEeecccCCCcchhhhhhhHhcCeeecCCC-ceeEccccce--eEeeccch-hhhhChhhcCCccccCCee-EEC
Confidence 999999999643 12 2221 22333332 2223456554 35554331 111 1247999995 554
Q ss_pred -CCCeEEEEEeeec---C------------------------------CccEEEEEEcC--CCCCcEEcccccccCCCCC
Q 010428 194 -PDKRWRVIIGSKI---N------------------------------RKGLAILYRSK--DFVHWIKAKHPLHSVKGTG 237 (511)
Q Consensus 194 -~~g~w~m~~ga~~---~------------------------------~~G~i~ly~S~--Dl~~W~~~~~~l~~~~~~g 237 (511)
++|+-||++-+.. + ..|+|.+.+.+ ++..|+...+++.+..-..
T Consensus 219 P~~G~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~~~~w~~~~PL~~a~~v~d 298 (428)
T PF02435_consen 219 PEDGKRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGAIGIAKLTNDDGTVWELLPPLLSANGVND 298 (428)
T ss_dssp TTTTEEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTTTSEEEEEEEEEEETTTBS
T ss_pred CCCCcEEEEEecccCCCCCccccCccccccccccccccccccccccceecceeeeEEecCCCCCccEEeCcceecccccc
Confidence 6899999986543 0 14678888764 4568998864444444456
Q ss_pred ceecCceEEeccCCCCCccccCCCCCceeEEEEe
Q 010428 238 MWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVS 271 (511)
Q Consensus 238 ~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S 271 (511)
..|-|+++.++ | ||+|+.+
T Consensus 299 e~ERP~iv~~~--g-------------kyYLFt~ 317 (428)
T PF02435_consen 299 ELERPHIVFMN--G-------------KYYLFTI 317 (428)
T ss_dssp -EEEEEEEEET--T-------------EEEEEEE
T ss_pred cccCCcEEEEC--C-------------EEEEEEE
Confidence 89999999998 6 8888765
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A .... |
| >cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.2e-07 Score=96.25 Aligned_cols=108 Identities=19% Similarity=0.257 Sum_probs=82.0
Q ss_pred cCCcceEEECCEEEEEeeeCCCC----CCCCCcEEEEEEeCCC-Ccceec-CCCCCCCC-CccCCCeEeeeEEEcCCCce
Q 010428 59 NDPNGVMIYKGIYHLFYQYNPKG----AVWGNIVWAHSTSKDL-INWIPH-DPAIYPSQ-QSDINGCWSGSATILPGEKP 131 (511)
Q Consensus 59 NDPnG~~~~~G~YHLFYQ~~P~~----~~~g~~~WgHa~S~DL-vhW~~~-~~aL~P~~-~~D~~g~~SGsav~~~dg~~ 131 (511)
-+| .+++++|+|||||...... ...+...+|.|+|+|+ -+|+++ .++|.|.. .||..+++.++++..++|++
T Consensus 81 ~~P-~vi~~~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~~g~w~~~~~pvl~~~~~~~~~~~~~~p~v~~~~~g~~ 159 (291)
T cd08994 81 HNP-TIKRFDGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSLDGPWKRSDQPILEPRPGGWDNLITSNPAVTRRPDGSY 159 (291)
T ss_pred cCC-eEEEECCEEEEEEEcccCCcccccCCCCceEEEEEeCCCCCCcEECCCceecCCCCccccccccCCCeEEeCCCCE
Confidence 468 4678899999999986531 1223568999999994 699994 56777754 36778899999987558999
Q ss_pred EEEEeccCCC---CcceEEEEEecCCCCcccceeeecCCCcee
Q 010428 132 AIFYTGIDPH---NRQVQNLAVPKNLSDPYLREWVKSPKNPLM 171 (511)
Q Consensus 132 ~l~YTg~~~~---~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi 171 (511)
+|+|+|.... ..+.|++|+|+|.. .+|+|...+||+
T Consensus 160 ~m~y~g~~~~~~~~~~~~gla~s~d~~----g~~~~~~~~~v~ 198 (291)
T cd08994 160 LLVYKGGTYNPTKGNRKYGVAIADSPT----GPYTKVSGPPFI 198 (291)
T ss_pred EEEEeccccCCCCCcEEEEEEEeCCCC----CCCEECCCCccc
Confidence 9999998642 45789999998853 469998666665
|
This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f |
| >cd08995 GH32_Aec43_like Glycosyl hydrolase family 32 | Back alignment and domain information |
|---|
Probab=98.66 E-value=7.2e-07 Score=89.94 Aligned_cols=133 Identities=20% Similarity=0.207 Sum_probs=87.5
Q ss_pred ccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecC--CCCCCCCCccCCCeEeeeEEEcC-CCceEEE
Q 010428 58 INDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHD--PAIYPSQQSDINGCWSGSATILP-GEKPAIF 134 (511)
Q Consensus 58 ~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~--~aL~P~~~~D~~g~~SGsav~~~-dg~~~l~ 134 (511)
+-.| .+++.+|+|||||..+... .......++|+|+|+++|++.+ +.+.+...++...+-.+.++.++ +|+++|+
T Consensus 62 ~~sg-s~~~~~g~~~l~YTg~~~~-~~~~~~i~~A~S~D~~~w~k~~~~pv~~~~~~~~~~~~rDP~Vf~~~~~g~y~m~ 139 (280)
T cd08995 62 IGTG-SVIKGEGTYHAFYTGHNLD-GKPKQVVMHATSDDLITWTKDPEFILIADGEGYEKNDWRDPFVFWNEEEGCYWML 139 (280)
T ss_pred ceEe-EEEeeCCEEEEEEEEECCC-CCCcEEEEEEECCCCCccEECCCCeecCCccccccCCccCCcEEEcCCCCeEEEE
Confidence 4456 3667899999999976432 1234579999999999999875 33432333443334456776643 5899999
Q ss_pred EeccCC----CCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeec
Q 010428 135 YTGIDP----HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI 206 (511)
Q Consensus 135 YTg~~~----~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~ 206 (511)
|.+... .......++.|+| |++|+.. .+++.+. .+ ..+.-|. +++ .+|+|+|+++.+.
T Consensus 140 ~g~~~~~~~~~~~g~i~~~~S~D-----l~~W~~~--~~~~~~~--~~---~~~E~P~-l~~-~~g~~~L~~s~~~ 201 (280)
T cd08995 140 LATRLLDGPYNRRGCIALFTSKD-----LKNWEYE--EPFYAPG--LY---FMPECPD-LFK-MGDWWYLVYSEFS 201 (280)
T ss_pred EEeccCCCCCCCCeEEEEEEeCC-----cCcceec--CceecCC--Cc---ceeecce-EEE-ECCEEEEEEEecc
Confidence 987542 2334566777776 4799875 4665432 11 2367787 455 5799999998753
|
This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a |
| >cd08999 GH43_ABN_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.8e-06 Score=87.15 Aligned_cols=155 Identities=16% Similarity=0.154 Sum_probs=98.2
Q ss_pred ccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCC-cceecCCCC-C-CCCCccCCCeEeeeEEEcCCCceEEE
Q 010428 58 INDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIPHDPAI-Y-PSQQSDINGCWSGSATILPGEKPAIF 134 (511)
Q Consensus 58 ~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLv-hW~~~~~aL-~-P~~~~D~~g~~SGsav~~~dg~~~l~ 134 (511)
+..| -+++++|+|||||..+-.+ .....+|+|+|+|.. .|++.+..+ . +.. ..++..+++++++||++||+
T Consensus 62 ~waP-~v~~~~g~y~~~y~~~~~~--~~~~~i~~a~s~~p~g~~~~~~~~~~~~~~~---~~~~~Dp~v~~d~dG~~Yl~ 135 (287)
T cd08999 62 FWAP-DVSYVNGKYVLYYSARDKG--SGGQCIGVATADSPLGPFTDHGKPPLCCPEG---EGGAIDPSFFTDTDGKRYLV 135 (287)
T ss_pred ccCc-eEEEECCEEEEEEEeecCC--CCCEEEEEEECCCCCCCCccCCcceEecCCC---CCCccCCCeEECCCCCEEEE
Confidence 4567 4788999999999976543 235679999999965 899875332 2 221 23456788887668999999
Q ss_pred EeccCCC--CcceEEEE-EecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeec--CC-
Q 010428 135 YTGIDPH--NRQVQNLA-VPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI--NR- 208 (511)
Q Consensus 135 YTg~~~~--~~q~q~lA-~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~--~~- 208 (511)
|.+.... ..+.+.++ ++.|+ .+|+... ..++.+. ..+....+.-|.+ ++ .+|+|||++++.. ..
T Consensus 136 ~~~~~~~~~~~~~i~~~~ls~d~-----~~~~~~~-~~i~~~~--~~~~~~~~EgP~i-~k-~~g~yyl~~S~~~~~~~~ 205 (287)
T cd08999 136 WKSDGNSIGKPTPIYLQELSADG-----LTLTGEP-VRLLRND--EDWEGPLVEAPYL-VK-RGGYYYLFYSAGGCCSGA 205 (287)
T ss_pred EeccCCCCCCCceEEEEEeCCCC-----ccccCCc-Eeeeccc--ccccCCceEeeEE-EE-ECCEEEEEEEcCCccCCC
Confidence 9764321 12224444 44443 5665431 2333322 2223344678984 56 5899999998753 11
Q ss_pred -ccEEEEEEcCCCC-CcEEccc
Q 010428 209 -KGLAILYRSKDFV-HWIKAKH 228 (511)
Q Consensus 209 -~G~i~ly~S~Dl~-~W~~~~~ 228 (511)
.=.+.+++|+++. .|+....
T Consensus 206 ~~y~i~~~~s~~~~Gpw~~~~~ 227 (287)
T cd08999 206 STYAVGVARSKSLLGPYVKAPG 227 (287)
T ss_pred CCEEEEEEEeCCCcCCcCCCCC
Confidence 2257789999987 8886543
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b |
| >cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.59 E-value=6.1e-06 Score=83.75 Aligned_cols=157 Identities=13% Similarity=0.124 Sum_probs=94.6
Q ss_pred CCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCC-cceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEE
Q 010428 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIF 134 (511)
Q Consensus 56 gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLv-hW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~l~ 134 (511)
+.+..| -+++.+|+|||||...... ......++|+|+|.. .|+..+..+.+.. ..+..++++.++||+++|+
T Consensus 53 ~~~waP-~v~~~~g~yyl~ys~~~~~--~~~~~i~~a~s~~p~gp~~~~~~~~~~~~----~~~iD~~vf~d~dG~~yl~ 125 (294)
T cd08991 53 RGFWAP-EVYYYNGKFYMYYSANDRD--EKTEHIGVAVSDSPLGPFRDIKKPPIDFE----PKSIDAHPFIDDDGKPYLY 125 (294)
T ss_pred CcEEcc-EEEEECCEEEEEEEeccCC--CCcceEEEEEeCCCCCCCCcCCCCcccCC----CcccCCceEECCCCCEEEE
Confidence 345678 4889999999999976433 235688999999987 7887654433322 2345788888777999999
Q ss_pred EeccCCCC--cceEEEEEecCCCCcccceeeecCCC---ceecC-------C-CC-CcCCCCCCCCCEEEEeCCCCeEEE
Q 010428 135 YTGIDPHN--RQVQNLAVPKNLSDPYLREWVKSPKN---PLMAP-------D-AM-NQINTSSFRDPTTAWLGPDKRWRV 200 (511)
Q Consensus 135 YTg~~~~~--~q~q~lA~s~d~~d~~l~~w~K~~~n---PVi~~-------p-~~-~~~~~~~fRDP~vvw~~~~g~w~m 200 (511)
|+...... ......+.+.|. .+|...... |+..+ + .. ...+..-..-|.+ ++ .+|+|||
T Consensus 126 ~~~~~~~~~~~~i~~~~l~~d~-----~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~-~k-~~g~yyl 198 (294)
T cd08991 126 YSRNNYGNRVSDIYGTELVDDK-----LSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTV-LK-HNGRYYL 198 (294)
T ss_pred EEecCCCCcccceEEEEEccce-----eeeccceeeccccccccccccccccccccccccCceeeCcEE-EE-ECCEEEE
Confidence 98754321 234444566553 445421111 22111 0 00 0011123457774 55 5789999
Q ss_pred EEeeec-CCc-cEEEEEEcCCC-CCcEEc
Q 010428 201 IIGSKI-NRK-GLAILYRSKDF-VHWIKA 226 (511)
Q Consensus 201 ~~ga~~-~~~-G~i~ly~S~Dl-~~W~~~ 226 (511)
++.+.. ... =.+.+++|+++ -.|+..
T Consensus 199 ~ys~~~~~~~~y~~~~a~s~~~~gp~~~~ 227 (294)
T cd08991 199 TYSANHYENEDYGVGYATADSPLGPWTKY 227 (294)
T ss_pred EEECCCCCCCCceEEEEEcCCCCCCcEec
Confidence 987643 111 14677888874 689874
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase | Back alignment and domain information |
|---|
Probab=98.58 E-value=4.9e-06 Score=83.73 Aligned_cols=154 Identities=10% Similarity=0.019 Sum_probs=96.4
Q ss_pred CCCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCC-cceecCCC-CCCCCCccCCCeEeeeEEEcCCCceE
Q 010428 55 KNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIPHDPA-IYPSQQSDINGCWSGSATILPGEKPA 132 (511)
Q Consensus 55 ~gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLv-hW~~~~~a-L~P~~~~D~~g~~SGsav~~~dg~~~ 132 (511)
.+-+.-|. +++++|+|||||..... .+....|+|+|+|.. .|++.... +.+ ...+...+..++++++.||+++
T Consensus 61 ~~~~wAP~-i~~~~g~yy~yy~~~~~---~~~~~igva~s~~p~Gpw~~~~~~~~~~-~~~~~~~~iDp~vf~d~dG~~y 135 (274)
T cd08990 61 KGQAWAPD-VVEKNGKYYLYFPARDK---DGGFAIGVAVSDSPAGPFKDAGGPILIT-TPSGGWYSIDPAVFIDDDGQAY 135 (274)
T ss_pred cCCcCcCe-EEEECCEEEEEEEeecC---CCceEEEEEEeCCCCCCCCCCCCccccc-cCCCCCCccCCcEEECCCCCEE
Confidence 34566784 78899999999997643 345679999999976 79987543 322 2222344567888887789999
Q ss_pred EEEeccCCCCcceEEEE-EecCCCCcccceeeecCCCceecCCC-CCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCcc
Q 010428 133 IFYTGIDPHNRQVQNLA-VPKNLSDPYLREWVKSPKNPLMAPDA-MNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKG 210 (511)
Q Consensus 133 l~YTg~~~~~~q~q~lA-~s~d~~d~~l~~w~K~~~nPVi~~p~-~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G 210 (511)
|+|.+. +...+| .+.| +.+|+.. ..+|..++ .......-+.-|. +++ .+|+|||++++.. ..
T Consensus 136 l~~~~~-----~~~~~~~l~~d-----~~~~~~~--~~~i~~~~~~~~~~~~~~EgP~-i~k-~~G~YYl~yS~~~--~~ 199 (274)
T cd08990 136 LYWGGG-----LGLRVAKLKPD-----MLSLKGE--PVEIVITDGAGDELRRFFEAPW-VHK-RNGTYYLSYSTGD--PE 199 (274)
T ss_pred EEECCc-----CCEEEEEeCcc-----ccccCCC--cEEEEeccccCCCCCCccccee-EEE-ECCEEEEEEECCC--Cc
Confidence 999864 233444 3333 3567542 12332110 0011112245787 456 6899999998753 45
Q ss_pred EEEEEEcCCCC-CcEEcccc
Q 010428 211 LAILYRSKDFV-HWIKAKHP 229 (511)
Q Consensus 211 ~i~ly~S~Dl~-~W~~~~~~ 229 (511)
.+.+.+|+++. .|+..+.+
T Consensus 200 ~~~~a~s~~p~GP~~~~g~~ 219 (274)
T cd08990 200 EIAYATSDSPLGPFTYRGVI 219 (274)
T ss_pred EEEEEEcCCCCCCcccCcEE
Confidence 67777888875 57654433
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of |
| >cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.3e-06 Score=84.90 Aligned_cols=156 Identities=14% Similarity=0.114 Sum_probs=98.0
Q ss_pred CCCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEE
Q 010428 55 KNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIF 134 (511)
Q Consensus 55 ~gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~l~ 134 (511)
.+-+.+|. +++++|+|||||.....+ ......+.|+|+|+.+|....... +.. ....++..++++.+++|+++|+
T Consensus 56 ~~~~waP~-v~~~~g~yyl~y~~~~~~--~~~~~i~~a~s~d~~g~~~~~~~~-~~~-~~~~~~iDp~vf~d~dg~~yl~ 130 (271)
T cd08978 56 SGGLWAPE-VIYYEGKYYLYYSVSDFD--YNGSGIGVATSEDPTGPFEDKVIR-PPT-SNNGNSIDPTVFKDDDGKYYLY 130 (271)
T ss_pred CCceeCCe-EEEECCEEEEEEEcccCC--CCcccEEEEECCCCCCCccccccC-cCc-cCCCCccCcceEEcCCCCEEEE
Confidence 45678894 889999999999987642 234579999999999987653211 111 1234577899988766999999
Q ss_pred EeccCCC-CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecC--CccE
Q 010428 135 YTGIDPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN--RKGL 211 (511)
Q Consensus 135 YTg~~~~-~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~--~~G~ 211 (511)
|.+.... ....+.++.+++. ..|.. ..+++... .......+..|.+ ++ .+|+|||++.+... ..-.
T Consensus 131 ~~~~~~~~~~~~i~~~~l~~~-----~~~~~--~~~~~~~~--~~~~~~~~EgP~~-~k-~~g~yyl~ys~~~~~~~~y~ 199 (271)
T cd08978 131 YGSGDPGAGFGGIYISELTDD-----LTKPT--GPPVLSAS--SGNNNAVTEGPTI-FK-KNGYYYLTYSANGTGDYGYN 199 (271)
T ss_pred EecccCCCCCCcEEEEEECcc-----ccccc--CCceeeee--eccCCCceEccEE-EE-ECCEEEEEEEeCCCCCCCce
Confidence 9876421 2234556655543 12222 23332111 1111234678984 56 57999999877542 2346
Q ss_pred EEEEEcCCCC-CcEEc
Q 010428 212 AILYRSKDFV-HWIKA 226 (511)
Q Consensus 212 i~ly~S~Dl~-~W~~~ 226 (511)
+.+++|++.. -|+..
T Consensus 200 ~~~~~s~~~~Gp~~~~ 215 (271)
T cd08978 200 IGYATSDSIDGPYVKK 215 (271)
T ss_pred EEEEECCCCCCCcCcC
Confidence 7788898874 46543
|
This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma |
| >PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety | Back alignment and domain information |
|---|
Probab=98.43 E-value=1e-06 Score=90.66 Aligned_cols=105 Identities=18% Similarity=0.279 Sum_probs=78.5
Q ss_pred CCCeEeeeEEEcCCCc-eEEEEeccCCCCcc-eEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEe
Q 010428 115 INGCWSGSATILPGEK-PAIFYTGIDPHNRQ-VQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWL 192 (511)
Q Consensus 115 ~~g~~SGsav~~~dg~-~~l~YTg~~~~~~q-~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~ 192 (511)
...+|.+.|++..++. ++|+|.+....... .+++|.|.|+ ++|++. .+||+.+. ..++.....||.|+..
T Consensus 29 ~~~vfNpgai~~~~~~R~~l~yr~~~~~~~~~~iglA~S~DG-----i~f~~~-~~pil~P~--~~~e~~GvEDPRVt~i 100 (312)
T PF04041_consen 29 PNAVFNPGAIVFDGGLRVYLLYRAYGSDIGSSRIGLARSDDG-----IHFERD-PEPILYPD--TDYEEWGVEDPRVTKI 100 (312)
T ss_dssp SSEEEEEEEEEETTE--EEEEEEEEESSSSEEEEEEEEESSS-----SS-EE--SS-SBEE---SSTTHTEEEEEEEEEE
T ss_pred cceEEcCcEEEECCeeEEEEEEEeECCCCceeEEEEEEccCC-----cCceEC-CCCEEccC--CCCcccCccceeEEEE
Confidence 4679999998653442 89999887654444 8999999997 789886 57999765 4455567899997754
Q ss_pred CCCCeEEEEEeeecCCccEEEEEEcCCCCCcEEcccc
Q 010428 193 GPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHP 229 (511)
Q Consensus 193 ~~~g~w~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~ 229 (511)
+++|||.+.+......++.+.+|+|+.+|++.+..
T Consensus 101 --~d~yymtYta~~~~~~~~~la~s~D~~~~~r~g~~ 135 (312)
T PF04041_consen 101 --DDTYYMTYTAYSGKGPRIGLATSKDFKHWERHGKI 135 (312)
T ss_dssp --TTEEEEEEEEEESSSEEEEEEEESSSSSEEEEECT
T ss_pred --CCEEEEEEEEecCCCcccceEEccchHhhEEeccc
Confidence 67999999887655567889999999999998743
|
On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B. |
| >cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68 | Back alignment and domain information |
|---|
Probab=98.42 E-value=8.2e-06 Score=81.28 Aligned_cols=157 Identities=13% Similarity=0.110 Sum_probs=100.2
Q ss_pred CCccCCcceEEEC-CEEEEEeeeCCCCCCCCCcEEEEEEeCCCCc-ceecC-CCCCCC--CCccCCCeEeeeEEEcCCCc
Q 010428 56 NWINDPNGVMIYK-GIYHLFYQYNPKGAVWGNIVWAHSTSKDLIN-WIPHD-PAIYPS--QQSDINGCWSGSATILPGEK 130 (511)
Q Consensus 56 gw~NDPnG~~~~~-G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvh-W~~~~-~aL~P~--~~~D~~g~~SGsav~~~dg~ 130 (511)
+-+..|. +++.+ |+|+|||..... ..+....+.|+|+|+.. |++.. ..+.+. ...+...+..++++.+++|+
T Consensus 58 ~~~wap~-v~~~~~g~~~l~yt~~~~--~~~~~~i~~a~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~~d~dG~ 134 (286)
T cd08772 58 GGIWAPS-IVYIENGKFYLYYTDVSF--TKNQQTIGVATAEDGNGPWTDYIGGPVLPDNPPAADVSNFRDPFVFEDDDGK 134 (286)
T ss_pred CcEecce-EEEcCCCCEEEEEEeecC--CCCceeEEEEEcCCCCCCCccccccccccCCCCccccccccCCeEEEcCCCC
Confidence 4466784 67777 999999998643 22456899999999975 56442 112222 12233456788888876699
Q ss_pred eEEEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecC---
Q 010428 131 PAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN--- 207 (511)
Q Consensus 131 ~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~--- 207 (511)
++|+|.+........+.+|.|+|. .+|++....+++... .....+.-|.+ ++ .+|+|||++++...
T Consensus 135 ~y~~~~~~~~~~~~~i~~~~s~d~-----~~w~~~~~~~~~~~~----~~~~~~E~P~~-~~-~~g~~yL~~s~~~~~~~ 203 (286)
T cd08772 135 WYLVFGSGDHHNFGGIFLYESDDD-----TTWKKGSAELLISEG----EGGKQIEGPGL-LK-KNGKYYLFYSINGTGRV 203 (286)
T ss_pred EEEEEccccCCCCCeEEEEEcCCC-----CCcccccceeeEeec----cCCCceeccEE-EE-ECCEEEEEEEcCCCcCC
Confidence 999998764333456788988874 678765322223221 12245678985 55 57999999987541
Q ss_pred -CccEEEEEEcCC-CCCcEEc
Q 010428 208 -RKGLAILYRSKD-FVHWIKA 226 (511)
Q Consensus 208 -~~G~i~ly~S~D-l~~W~~~ 226 (511)
..-.+.+++|++ +-.|+..
T Consensus 204 ~~~y~~~~~~~~~~~g~~~~~ 224 (286)
T cd08772 204 DSTYSIGYARSESDTGPYVPK 224 (286)
T ss_pred CCCcceEEEEccCCCCCcccC
Confidence 123566777765 3456543
|
Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32 |
| >cd08986 GH43_7 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.40 E-value=2.9e-06 Score=85.45 Aligned_cols=121 Identities=18% Similarity=0.185 Sum_probs=72.3
Q ss_pred CCCCEEEEeCCCCeEEEEEeeecC---------CccEEEEEEcCCCCCcEEcccccccCC--------------CCCcee
Q 010428 184 FRDPTTAWLGPDKRWRVIIGSKIN---------RKGLAILYRSKDFVHWIKAKHPLHSVK--------------GTGMWE 240 (511)
Q Consensus 184 fRDP~vvw~~~~g~w~m~~ga~~~---------~~G~i~ly~S~Dl~~W~~~~~~l~~~~--------------~~g~wE 240 (511)
+|||+|+ +..+|.|||+..+... ..+.|.+|+|+||++|+..+..+.... ..+..+
T Consensus 2 ~rDP~v~-~~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~W 80 (269)
T cd08986 2 IRDTYVT-LGPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAVW 80 (269)
T ss_pred CcCCeEE-ecCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCcC
Confidence 7999965 4457888888765431 124588999999999998775443221 123445
Q ss_pred cCceEEeccCCCCCccccCCCCCceeEEEEeeCCC--ceeEEEEEEEeCCCCeeecCCCCcCCCCccccccCCCccceee
Q 010428 241 CPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDT--KHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYASKTF 318 (511)
Q Consensus 241 CPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~~--~~~~Y~iG~~d~~~~~F~p~~~~~d~~~~~~lD~G~fYA~qtf 318 (511)
+|+++.++ | +|+|.+|.... ......+..-+...+.|+..... ..+ ..-.-+..|
T Consensus 81 AP~v~~~~--g-------------~yyl~~s~~~~~~~~~~i~va~a~~p~Gp~~~~~~~------~~~--~~~iD~~~f 137 (269)
T cd08986 81 APELHYIK--G-------------RWYLVACMNNPGYGGSSILLSTSGKIEGPYKHITGN------KPL--FPGIDPSLF 137 (269)
T ss_pred CceEEEEC--C-------------EEEEEEEccCCCCCceEEEEEeCCCCCCCcEeccCC------CCC--CCccCCceE
Confidence 99999997 6 88988886431 12223333333333455432110 000 012346778
Q ss_pred ecCCCCcEEEE
Q 010428 319 FDGAKNRRVLW 329 (511)
Q Consensus 319 ~d~~~grril~ 329 (511)
.|+ +|+..|+
T Consensus 138 ~D~-DG~~Yl~ 147 (269)
T cd08986 138 EDD-DGKVYLV 147 (269)
T ss_pred EcC-CCCEEEE
Confidence 875 7877765
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08983 GH43_4 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.37 E-value=1.7e-06 Score=87.59 Aligned_cols=90 Identities=20% Similarity=0.318 Sum_probs=63.3
Q ss_pred CCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeec-----CCccEEEEEEcCCCCCcEEcccccccCC-CCCce
Q 010428 166 PKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-----NRKGLAILYRSKDFVHWIKAKHPLHSVK-GTGMW 239 (511)
Q Consensus 166 ~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~-----~~~G~i~ly~S~Dl~~W~~~~~~l~~~~-~~g~w 239 (511)
.++|||.+. . ....+|||+|++..++|+|||+..... .....|.+++|+||++|+..+..+.... ...+|
T Consensus 4 ~~~pvl~~~--~--g~~~~rDP~I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~~~~~~W 79 (276)
T cd08983 4 NGNPVLTST--A--GTKGLRDPFILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPPNAGNTW 79 (276)
T ss_pred CCceEEeCC--c--CCCCccCCeEEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCCCcCcEe
Confidence 368999754 2 347799999766435889999876542 1223588999999999998764432222 23467
Q ss_pred ecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 010428 240 ECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (511)
Q Consensus 240 ECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~ 273 (511)
+|++|.....| +|++.+|..
T Consensus 80 -APev~~d~~~g-------------~y~~~~s~~ 99 (276)
T cd08983 80 -APEAFWDAERG-------------QYVVYWSSR 99 (276)
T ss_pred -CccceEcCCCC-------------eEEEEEecc
Confidence 99999886434 888888764
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=98.29 E-value=9.4e-06 Score=81.75 Aligned_cols=78 Identities=23% Similarity=0.367 Sum_probs=56.1
Q ss_pred CceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCccEEEEEEcCCCCCcEEcccccccC---------CCCCc
Q 010428 168 NPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSV---------KGTGM 238 (511)
Q Consensus 168 nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~---------~~~g~ 238 (511)
||||.. ++.||.|+ + .++.|||+.++.....| +.+|+|+||.+|+..+..+... ...++
T Consensus 1 NPvi~~---------~~~DP~ii-~-~~~~yY~~~t~~~~~~g-~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~ 68 (269)
T cd08989 1 NPILKG---------DNPDPSII-R-AGDDYYMASSTFEWFPG-VQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGI 68 (269)
T ss_pred CCcCCC---------CCCCCcEE-E-ECCeEEEEECccccCCC-cEEEECCccCCCEEccccccCccccccccCCCCCcE
Confidence 688742 36899965 4 47899999865432233 7899999999999987554321 12357
Q ss_pred eecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 010428 239 WECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (511)
Q Consensus 239 wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~ 273 (511)
| +|+++.++ | ||+|.++..
T Consensus 69 W-AP~v~~~~--G-------------~yy~yy~~~ 87 (269)
T cd08989 69 W-APCLSYYD--G-------------KFWLIYTAV 87 (269)
T ss_pred E-cceEEEEC--C-------------EEEEEEecc
Confidence 7 99999997 6 888888764
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended |
| >cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.4e-05 Score=81.14 Aligned_cols=78 Identities=19% Similarity=0.388 Sum_probs=56.5
Q ss_pred CCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCccEEEEEEcCCCCCcEEcccccccCCCCCceecCceEE
Q 010428 167 KNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFP 246 (511)
Q Consensus 167 ~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~g~wECPdlf~ 246 (511)
.||||.. .+.||.|+ + .+++|||+.++.. ..+.+.+|+|+||.+|+..+..+. ....++| +|+++.
T Consensus 7 ~nPv~~~---------~~~DP~i~-~-~~~~yY~~~t~~~-~~~gi~i~~S~DL~~W~~~g~~~~-~~~~~~W-AP~i~~ 72 (280)
T cd09002 7 RNPILAG---------DYPDPSIL-R-DGEDYYMTHSSFK-YTPGLVIWHSRDLVNWTPVGPALP-EYEGDVW-APDLCK 72 (280)
T ss_pred eCCccCC---------CCCCCEEE-E-ECCEEEEEEcchh-cCCCEEEEECCCcCCceEcccccc-CCCCCEE-cCeeEE
Confidence 4899852 26799965 4 4789999765432 223488999999999998765443 2335689 899999
Q ss_pred eccCCCCCccccCCCCCceeEEEEeeC
Q 010428 247 VSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (511)
Q Consensus 247 l~~~g~~g~~~s~~~~~~k~vL~~S~~ 273 (511)
.+ | ||+|.++..
T Consensus 73 ~~--g-------------kyy~yys~~ 84 (280)
T cd09002 73 YD--G-------------RYYIYFPAI 84 (280)
T ss_pred EC--C-------------EEEEEEEee
Confidence 87 6 888888764
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs |
| >cd08998 GH43_ABN_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.24 E-value=4.1e-05 Score=77.65 Aligned_cols=154 Identities=14% Similarity=0.091 Sum_probs=93.1
Q ss_pred CCCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCC--CcceecCCCCCCCCCccCCCeEeeeEEEcCCCceE
Q 010428 55 KNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDL--INWIPHDPAIYPSQQSDINGCWSGSATILPGEKPA 132 (511)
Q Consensus 55 ~gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DL--vhW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~ 132 (511)
.+-+..| -+++.+|+|||||..+..+. +....++|+|+|+ -.|+..++++.+....+...+..+++++++||++|
T Consensus 55 ~~~~wAP-~v~~~~g~yyl~ys~~~~~~--~~~~i~va~s~~~~~gpw~~~~~v~~~~~~~~~~~~iDp~vf~d~dG~~Y 131 (288)
T cd08998 55 SGNLWAP-DVIYLNGKYYLYYSVSTFGS--NRSAIGLATSDTLPDGPWTDHGIVIESGPGRDDPNAIDPNVFYDEDGKLW 131 (288)
T ss_pred CCCccCC-eEEEECCEEEEEEEEEeCCC--CceEEEEEEeCCCCCCCCEEcceeeecCCCCCCcccccCCEEEcCCCCEE
Confidence 4456678 47789999999999765332 3457899999998 79999876665543222335667888887789999
Q ss_pred EEEeccCCCCcceEEEE-EecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeec-C---
Q 010428 133 IFYTGIDPHNRQVQNLA-VPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-N--- 207 (511)
Q Consensus 133 l~YTg~~~~~~q~q~lA-~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~-~--- 207 (511)
|+|.+... .+.++ .+.|.+.+ ..+... ...++..+ . .......|+ +++ .+|+|||++++.. .
T Consensus 132 l~~~~~~~----~i~~~~l~~~~~~~--~~~~~~-~~~i~~~~--~--~~~~~Egp~-~~k-~~g~YYl~~S~~~~~~~~ 198 (288)
T cd08998 132 LSFGSFWG----GIFLVELDPKTGKP--LYPGGY-GYNIAGRP--R--GHGAIEAPY-IIY-RGGYYYLFVSYGGCCAGE 198 (288)
T ss_pred EEeeeccC----CEEEEEeCcccCCc--cCCCCc-ceEEeccC--C--CCCceeeeE-EEE-eCCEEEEEEEcchhcCCC
Confidence 99975321 22333 32332211 222110 01122221 1 112356898 456 5899999987532 1
Q ss_pred Ccc-EEEEEEcCCCC-CcE
Q 010428 208 RKG-LAILYRSKDFV-HWI 224 (511)
Q Consensus 208 ~~G-~i~ly~S~Dl~-~W~ 224 (511)
..+ ++.+++|+++. -|+
T Consensus 199 ~~~y~v~~~~s~~~~GP~~ 217 (288)
T cd08998 199 DSTYNIRVGRSKSITGPYV 217 (288)
T ss_pred CCceEEEEEEcCCCCCCcC
Confidence 122 57899998864 455
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b |
| >cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases | Back alignment and domain information |
|---|
Probab=98.22 E-value=1.5e-05 Score=80.98 Aligned_cols=133 Identities=14% Similarity=0.075 Sum_probs=87.5
Q ss_pred CCcceEEEC-CEEEEEeeeCCCCCCCCCcEEEEEEeC-CCCcceecCCC-CCCCCCccCCCeEeeeEEEcCCCceEEEEe
Q 010428 60 DPNGVMIYK-GIYHLFYQYNPKGAVWGNIVWAHSTSK-DLINWIPHDPA-IYPSQQSDINGCWSGSATILPGEKPAIFYT 136 (511)
Q Consensus 60 DPnG~~~~~-G~YHLFYQ~~P~~~~~g~~~WgHa~S~-DLvhW~~~~~a-L~P~~~~D~~g~~SGsav~~~dg~~~l~YT 136 (511)
.++ ++..+ |+|+|||..+......+....++|+|+ |+++|++.+.. +.+....+..+.-.+.++.. +|+++|+|+
T Consensus 65 sGs-av~~~~g~~~~~YTg~~~~~~~~~~~~~lA~S~ddg~~w~k~~~~~~~~~~~~~~~~~RDP~V~~~-~g~~~m~~g 142 (298)
T cd08996 65 SGS-AVVDDNGKLVLFYTGNVKLDGGRRQTQCLAYSTDDGRTFTKYEGNPVIPPPDGYTTHFRDPKVFWH-DGKWYMVLG 142 (298)
T ss_pred eCe-EEEcCCCcEEEEEeceeCCCCCceEEEEEEEEcCCCCEEEECCCCceEcCCCCCCCcccCCeEEeE-CCEEEEEEE
Confidence 443 34456 999999997653212245678999999 89999987532 22111223345567888764 699999999
Q ss_pred ccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCC--CeEEEEEeeec
Q 010428 137 GIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPD--KRWRVIIGSKI 206 (511)
Q Consensus 137 g~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~--g~w~m~~ga~~ 206 (511)
+..........++.|+|. ++|+.. .+++... ......+.-|.+ ++ -+ ++|+|+++...
T Consensus 143 ~~~~~~~~~i~ly~S~Dl-----~~W~~~--~~~~~~~---~~~~~~~EcP~l-~~-l~~~~k~vL~~s~~~ 202 (298)
T cd08996 143 AGTEDGTGRILLYRSDDL-----KNWEYL--GELLTSL---GDFGYMWECPDL-FP-LDVEGKWVLIFSPQG 202 (298)
T ss_pred EEecCCCcEEEEEECCCC-----CCCEEc--ceecccC---CCccceEeCCcE-EE-ECCCCeEEEEECCCC
Confidence 875444556788888874 899975 3443211 112235778884 55 46 99999998764
|
Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal |
| >cd08981 GH43_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.21 E-value=2.2e-05 Score=80.03 Aligned_cols=77 Identities=14% Similarity=0.149 Sum_probs=55.1
Q ss_pred CCCCCCEEEEeCCCCeEEEEEeeecCC----ccEEEEEEcCCCCCcEEcccccccCC---CCCceecCceEEeccCCCCC
Q 010428 182 SSFRDPTTAWLGPDKRWRVIIGSKINR----KGLAILYRSKDFVHWIKAKHPLHSVK---GTGMWECPDFFPVSTYGLNG 254 (511)
Q Consensus 182 ~~fRDP~vvw~~~~g~w~m~~ga~~~~----~G~i~ly~S~Dl~~W~~~~~~l~~~~---~~g~wECPdlf~l~~~g~~g 254 (511)
..+|||+|++..++|.|||+..+.... ...+.+|+|+||++|+..+..+.... ......+|++...+ |
T Consensus 4 ~~~~DP~v~~~~~~g~yYl~~T~~~~~~~~~~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~~~~--G--- 78 (291)
T cd08981 4 IRIRDPFILADPETGTYYLYGTTDPNIWGGEGTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVHEYK--G--- 78 (291)
T ss_pred ccccCCEEEEECCCCEEEEEEecCccccccCCCcEEEEECCChhcccccceeeccCCCcCccccccCCeeeeeC--C---
Confidence 358999987654589999988765311 12378999999999998775443221 12356789999887 6
Q ss_pred ccccCCCCCceeEEEEeeC
Q 010428 255 LDTSDMGPNTKHVLKVSLD 273 (511)
Q Consensus 255 ~~~s~~~~~~k~vL~~S~~ 273 (511)
+|+|.++..
T Consensus 79 ----------~yyly~s~~ 87 (291)
T cd08981 79 ----------RYYMFATFH 87 (291)
T ss_pred ----------EEEEEEEec
Confidence 888887764
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases | Back alignment and domain information |
|---|
Probab=98.00 E-value=0.00038 Score=70.02 Aligned_cols=141 Identities=8% Similarity=0.039 Sum_probs=86.0
Q ss_pred ccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCC-ccee-cC-CCCCCCCCccCCCeEeeeEEEcCCCceEEE
Q 010428 58 INDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIP-HD-PAIYPSQQSDINGCWSGSATILPGEKPAIF 134 (511)
Q Consensus 58 ~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLv-hW~~-~~-~aL~P~~~~D~~g~~SGsav~~~dg~~~l~ 134 (511)
+.-| -+++++|+|+|||..+ ...++|+|+|.. .|++ .+ +.+.+.. .......++++.++||+++|+
T Consensus 66 ~wAP-~v~~~~g~yy~yys~~--------~~i~va~s~~p~gp~~~~~~~p~~~~~~--~~~~~iDp~vf~d~dG~~yl~ 134 (275)
T cd09004 66 AWAP-SVIERNGKYYFYFSAN--------GGIGVAVADSPLGPFKDALGKPLIDKFT--FGAQPIDPDVFIDDDGQAYLY 134 (275)
T ss_pred cCCC-eEEEECCEEEEEEEcC--------CcEEEEEeCCCCCCCCCCCCCccccCCc--CCCCccCCCeEECCCCCEEEE
Confidence 4457 4788999999999865 358999999975 7887 33 3333321 123456688887778999999
Q ss_pred EeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeec-C-CccEE
Q 010428 135 YTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-N-RKGLA 212 (511)
Q Consensus 135 YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~-~-~~G~i 212 (511)
|.+.. .......+.|. .+|+.. ..++... . ..-+.-|. +++ .+|+|||++++.. . ..-++
T Consensus 135 ~~~~~----~~~i~~l~~d~-----~~~~~~--~~~~~~~--~---~~~~EgP~-i~k-~~G~yyl~ys~~~~~~~~Y~~ 196 (275)
T cd09004 135 WGGWG----HCNVAKLNEDM-----ISFDGE--RDGSEIT--P---KNYFEGPF-MFK-RNGIYYLMWSEGGWTDPDYHV 196 (275)
T ss_pred EcCcC----CEEEEEECCCc-----ccccCc--ceeeecc--C---CCceecce-EEE-ECCEEEEEEECCCCCCCCceE
Confidence 97531 11122344442 456432 1121111 1 11356887 466 6899999988753 1 12256
Q ss_pred EEEEcCCCC-CcEEcc
Q 010428 213 ILYRSKDFV-HWIKAK 227 (511)
Q Consensus 213 ~ly~S~Dl~-~W~~~~ 227 (511)
.+++|++.. -|+...
T Consensus 197 ~ya~s~~~~GP~~~~~ 212 (275)
T cd09004 197 AYAMADSPLGPFERPG 212 (275)
T ss_pred EEEEcCCCCCCcccCC
Confidence 778888874 477654
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08985 GH43_6 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.00077 Score=67.78 Aligned_cols=148 Identities=9% Similarity=0.058 Sum_probs=90.8
Q ss_pred CCCccCCcceEEE--CCEEEEEeeeCCCCCCCCCcEEEEEEeCCCC-cceecCCCCCCCCCccCCCeEeeeEEEcCCCce
Q 010428 55 KNWINDPNGVMIY--KGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIPHDPAIYPSQQSDINGCWSGSATILPGEKP 131 (511)
Q Consensus 55 ~gw~NDPnG~~~~--~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLv-hW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~ 131 (511)
.+.+.-| -++|. +|+|||||..... ..+....|+|+|++-. .|+.++..+ |. ......+++++++||+.
T Consensus 62 ~~~~waP-~v~y~~~~g~Y~m~~~~~~~--~~~~~~igvA~Sd~p~Gpf~~~~~~~-~~----~~~~~Dp~vf~DdDG~~ 133 (265)
T cd08985 62 GRIIERP-KVIYNAKTGKYVMWMHIDSS--DYSDARVGVATSDTPTGPYTYLGSFR-PL----GYQSRDFGLFVDDDGTA 133 (265)
T ss_pred CcEEECC-eEEEeCCCCEEEEEEEeCCC--CCcceeEEEEEeCCCCCCCEECCccC-CC----CCCccCCceEEcCCCCE
Confidence 3345566 36664 6999999998752 2346689999999875 688776433 21 13346688888888999
Q ss_pred EEEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecC-Ccc
Q 010428 132 AIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN-RKG 210 (511)
Q Consensus 132 ~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~-~~G 210 (511)
||+|..... ....++.-++. +..+ .+.+..... ......|. +++ .+|.|||+.+.... ...
T Consensus 134 Yl~~~~~~~---~~i~i~~L~~d----~~~~---~~~~~~~~~------~~~~EaP~-i~K-~~g~YYL~~S~~t~~~~~ 195 (265)
T cd08985 134 YLLYSDRDN---SDLYIYRLTDD----YLSV---TGEVTTVFV------GAGREAPA-IFK-RNGKYYLLTSGLTGWNPN 195 (265)
T ss_pred EEEEecCCC---CceEEEEeCCC----cccc---cceEEEccC------CCccccce-EEE-ECCEEEEEEccCCCccCC
Confidence 999986531 23444433221 1222 233332111 12457898 577 68999999876531 122
Q ss_pred EEEEEEcCCCC-CcEEccc
Q 010428 211 LAILYRSKDFV-HWIKAKH 228 (511)
Q Consensus 211 ~i~ly~S~Dl~-~W~~~~~ 228 (511)
.+.+++|+++. .|+..+.
T Consensus 196 ~~~y~~s~s~~GP~~~~~~ 214 (265)
T cd08985 196 DARYATATSILGPWTDLGN 214 (265)
T ss_pred ceEEEEecCCCCCccccCc
Confidence 46778888875 6776543
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00011 Score=73.75 Aligned_cols=149 Identities=12% Similarity=0.086 Sum_probs=89.6
Q ss_pred CcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCC-cceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEEEeccC
Q 010428 61 PNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGID 139 (511)
Q Consensus 61 PnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLv-hW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~l~YTg~~ 139 (511)
| -+++.+|+|||||..... -.....+.|+|++.. .|+.......+ ...+..+++++++||+.||+|.+..
T Consensus 70 P-~i~~~~g~yy~y~~~~~~---~~~~~~~va~a~~~~Gp~~~~~~~~~~-----~~~~iD~~vf~d~dG~~Yl~~~~~~ 140 (286)
T PF04616_consen 70 P-EIHYINGKYYMYYSDSGG---DAGSGIGVATADSPDGPWTDPGKIPIP-----GGNSIDPSVFVDDDGKYYLYYGSWD 140 (286)
T ss_dssp E-EEEEETTEEEEEEEEEST---STTEEEEEEEESSTTS-EEEEEEEEEE-----SSSSSSEEEEEETTSEEEEEEEEST
T ss_pred C-eEEEcCCeEEEEEEccCC---CCCcceeEEEeCCcccccccccceeec-----cccccCceEEEecCCCcEEeCcccC
Confidence 5 367889999999992211 123458899999986 89987544332 2345668888877799999999865
Q ss_pred CC-CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeec-CCccEEEEEEc
Q 010428 140 PH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-NRKGLAILYRS 217 (511)
Q Consensus 140 ~~-~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~-~~~G~i~ly~S 217 (511)
.. ..+.+.+|...+.. .++.......+.... ......-..-|+ +++ .+|+|||++++.. ...=++.+++|
T Consensus 141 ~~~~~~~i~~~~l~~d~----~~~~~~~~~~~~~~~--~~~~~~~~Egp~-~~k-~~g~yYl~~s~~~~~~~y~v~~~~s 212 (286)
T PF04616_consen 141 NGDPGGGIYIAELDPDG----TSLTGEPVVVIFPGD--EGWDGGVVEGPF-VFK-HGGKYYLFYSAGGTGSPYQVGYARS 212 (286)
T ss_dssp TTSSEEEEEEEEEETTT----SSEEEEECEEEEEES--GSSTTTBEEEEE-EEE-ETTEEEEEEEESGSSTTTEEEEEEE
T ss_pred CCccceeEEeecccCcc----ccccCcccccccccc--cccCCccccceE-EEE-cCCCEEEEEeccCCCCCceEEEeec
Confidence 32 23344455433321 334432212222211 112223345787 456 5899999998654 22235778999
Q ss_pred CCCCC-cEEc
Q 010428 218 KDFVH-WIKA 226 (511)
Q Consensus 218 ~Dl~~-W~~~ 226 (511)
+++.. |+..
T Consensus 213 ~~~~gp~~~~ 222 (286)
T PF04616_consen 213 DSPLGPWEWK 222 (286)
T ss_dssp SSTTSGGEET
T ss_pred cCCCCceeec
Confidence 99875 4543
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B .... |
| >TIGR01322 scrB_fam sucrose-6-phosphate hydrolase | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00018 Score=77.83 Aligned_cols=134 Identities=10% Similarity=0.066 Sum_probs=82.1
Q ss_pred CCcceEEECCEEEEEeeeCCCCCCCC-CcEEEEEEeCCCCcceecC-CCCCCCC-CccCCCeEeeeEEEcCCCceEEEEe
Q 010428 60 DPNGVMIYKGIYHLFYQYNPKGAVWG-NIVWAHSTSKDLINWIPHD-PAIYPSQ-QSDINGCWSGSATILPGEKPAIFYT 136 (511)
Q Consensus 60 DPnG~~~~~G~YHLFYQ~~P~~~~~g-~~~WgHa~S~DLvhW~~~~-~aL~P~~-~~D~~g~~SGsav~~~dg~~~l~YT 136 (511)
.++ ++..+|++||||..+.....+. ...-++|+|+|+.+|++.+ ++|.+.. .+. .+.-.+.++. .+|+++|++.
T Consensus 88 sGs-av~~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg~~~~k~~~pvi~~~~~~~~-~~fRDP~V~~-~~g~~~M~~g 164 (445)
T TIGR01322 88 SGS-AVDNNGQLTLMYTGNVRDSDWNRESYQCLATMDDDGHFEKFGIVVIELPPAGYT-AHFRDPKVWK-HNGHWYMVIG 164 (445)
T ss_pred ECe-EEeeCCEEEEEEeccccCCCCCeeEEEEEEEcCCCCeEEECCCceEeCCCCCCc-CcCCCCcEEe-ECCEEEEEEE
Confidence 453 4468999999999875332222 2335689999999999986 4565432 221 2233566654 5899999998
Q ss_pred ccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCC-cCCCCCCCCCEEEEeCCCCeEEEEEeee
Q 010428 137 GIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMN-QINTSSFRDPTTAWLGPDKRWRVIIGSK 205 (511)
Q Consensus 137 g~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~-~~~~~~fRDP~vvw~~~~g~w~m~~ga~ 205 (511)
+..........+..|+| |++|+.. .++..+...+ +.....+.-|- +++ -+++|+|+++..
T Consensus 165 ~~~~~~~g~i~ly~S~D-----l~~W~~~--g~~~~~~~~~~~~~g~~~ECPd-lf~-l~~k~vL~~s~~ 225 (445)
T TIGR01322 165 AQTETEKGSILLYRSKD-----LKNWTFV--GEILGDGQNGLDDRGYMWECPD-LFS-LDGQDVLLFSPQ 225 (445)
T ss_pred EecCCCceEEEEEECCC-----cccCeEe--cccccccccccCCccceEECCe-EEE-ECCcEEEEEecc
Confidence 75433333446666766 4899975 3554321000 11112467786 455 578999999754
|
|
| >cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00035 Score=72.90 Aligned_cols=148 Identities=15% Similarity=0.152 Sum_probs=91.8
Q ss_pred ECCEEEEEeeeCCCCC---CCCCcEEEEEEeCCCC----cceecCCCCCCCCC-ccC-------------CCeEeeeEEE
Q 010428 67 YKGIYHLFYQYNPKGA---VWGNIVWAHSTSKDLI----NWIPHDPAIYPSQQ-SDI-------------NGCWSGSATI 125 (511)
Q Consensus 67 ~~G~YHLFYQ~~P~~~---~~g~~~WgHa~S~DLv----hW~~~~~aL~P~~~-~D~-------------~g~~SGsav~ 125 (511)
.+|+|||||..+-... ..-....++++|+|+. .|+.+...+.+++. |+. ...=.+.++.
T Consensus 80 ~dg~~~lfYTg~~~~~~~~~~~~Q~ia~a~~~~~~v~~~~~~~~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~ 159 (349)
T cd08997 80 DDGTVQLFYTAVGRKGEPQPTFTQRLALARGTLSVVNLSGFEDHHELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFE 159 (349)
T ss_pred CCCeEEEEEeccccCCCCCCCceEEEEEEECCCcceEecccCccceeeeCCCceEEeccccccccccCccCcccCCEEEe
Confidence 4699999999874311 1124578999999984 55444445556542 221 1122456666
Q ss_pred cC-CCceEEEEeccCCCC---------------------------cceEEEEEecCCCCcccceeeecCCCceecCCCCC
Q 010428 126 LP-GEKPAIFYTGIDPHN---------------------------RQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMN 177 (511)
Q Consensus 126 ~~-dg~~~l~YTg~~~~~---------------------------~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~ 177 (511)
++ +|++||+++++.... .-.+++|++++. .|.+|+-. .|++.+.
T Consensus 160 d~~~G~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~---dl~~W~~~--~PL~~a~--- 231 (349)
T cd08997 160 DPETGKTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKND---DLTEWKLL--PPLLEAN--- 231 (349)
T ss_pred cCCCCcEEEEEEeccCCCCCccccccccccccccccccccccccccceEEEEEecCC---CCCCcEEc--CccccCC---
Confidence 54 588999999875421 124567776642 25789875 5887643
Q ss_pred cCCCCCCCCCEEEEeCCCCeEEEEEeeecC-------CccEEEEEEcCCCC-CcEE
Q 010428 178 QINTSSFRDPTTAWLGPDKRWRVIIGSKIN-------RKGLAILYRSKDFV-HWIK 225 (511)
Q Consensus 178 ~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~-------~~G~i~ly~S~Dl~-~W~~ 225 (511)
.. ...+..|.+ ++ .+|+|||+..++.. +...+..|.|+++. .|+.
T Consensus 232 ~v-~d~~E~P~v-~~-~~gk~yL~~s~~~~~~~~~~~~~~~~~g~vsdsl~GP~~~ 284 (349)
T cd08997 232 GV-NDELERPHV-VF-HNGKYYLFTISHRSTFAPGLSGPDGLYGFVSDSLRGPYKP 284 (349)
T ss_pred Cc-CCceEcceE-EE-ECCEEEEEEeCCcCccccccCCCCcEEEEEeCCCCCCCcc
Confidence 21 234789985 55 58999999875532 11246677888875 4654
|
Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n |
| >COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00032 Score=75.81 Aligned_cols=141 Identities=22% Similarity=0.326 Sum_probs=80.4
Q ss_pred EEEEeCCCCcceecCCCCCCCCC-------ccCCCeEeeeEEEcCCCceEEEEeccCCCC---cceEEEEEecCCCCccc
Q 010428 90 AHSTSKDLINWIPHDPAIYPSQQ-------SDINGCWSGSATILPGEKPAIFYTGIDPHN---RQVQNLAVPKNLSDPYL 159 (511)
Q Consensus 90 gHa~S~DLvhW~~~~~aL~P~~~-------~D~~g~~SGsav~~~dg~~~l~YTg~~~~~---~q~q~lA~s~d~~d~~l 159 (511)
.-+.|+||+||+.....|.+... -+..|||.+++. .+||+++|+||...... ....+..++....+
T Consensus 56 ~i~hS~DL~nW~~v~tpl~~~~~ld~kgn~~~S~giWAPdl~-y~dGkfwl~ytdvk~~~g~~k~~~nyl~t~~s~~--- 131 (549)
T COG3507 56 AIHHSRDLVNWTLVSTPLIRTSQLDLKGNFPYSGGIWAPDLS-YHDGKFWLYYTDVKRSGGPYKNAGNYLVTAESID--- 131 (549)
T ss_pred eeeccccccCcEEecccccCcchhhhhcccCCCCceecccee-cCCCcEEEEEecccccCCcccccccEEEEecCCC---
Confidence 34679999999999776666532 245789999987 68999999998765421 11112222222111
Q ss_pred ceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCC------ccEEEEEEcC---CCCCcEEccccc
Q 010428 160 REWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINR------KGLAILYRSK---DFVHWIKAKHPL 230 (511)
Q Consensus 160 ~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~------~G~i~ly~S~---Dl~~W~~~~~~l 230 (511)
-.|.. |+..+- ..--||.++ .+++|+-||+.++...+ .|.++-+.++ -+..+.+ + .+
T Consensus 132 G~WsD----pi~l~~-------~~~iDPslf-~D~dGr~wlv~~~w~~~~~~~~~~~i~l~~~~~~~~~l~g~~~-~-~~ 197 (549)
T COG3507 132 GPWSD----PIKLNG-------SNAIDPSLF-FDKDGRKWLVNGSWDGGIFMHSFAGIILQEYDKTTQKLVGQGY-K-II 197 (549)
T ss_pred CCccc----ceecCC-------cCccCCcee-ecCCCCEEEEecccCCCcccccccceeeeeccccccccCCccc-e-eE
Confidence 23542 333221 123599954 55889999999876532 1232222221 1223321 1 12
Q ss_pred ccCCCCCceecCceEEec
Q 010428 231 HSVKGTGMWECPDFFPVS 248 (511)
Q Consensus 231 ~~~~~~g~wECPdlf~l~ 248 (511)
.........|-|-+++.+
T Consensus 198 ~~G~~~~~~EGPhl~k~~ 215 (549)
T COG3507 198 FDGGNGGLTEGPHLYKKT 215 (549)
T ss_pred eccCCCccccCceeeccC
Confidence 222334578999888887
|
|
| >COG2152 Predicted glycosylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00032 Score=70.72 Aligned_cols=114 Identities=15% Similarity=0.249 Sum_probs=83.3
Q ss_pred CCCCCC--CccCC----CeEeeeEEEcCCCceEEEEecc-----CCCCcceEEEEEecCCCCcccce-eeecCCCceecC
Q 010428 106 AIYPSQ--QSDIN----GCWSGSATILPGEKPAIFYTGI-----DPHNRQVQNLAVPKNLSDPYLRE-WVKSPKNPLMAP 173 (511)
Q Consensus 106 aL~P~~--~~D~~----g~~SGsav~~~dg~~~l~YTg~-----~~~~~q~q~lA~s~d~~d~~l~~-w~K~~~nPVi~~ 173 (511)
.|.|.. .+++. .+|.++++.. +++++|+|... +........+|.|+|+ .+ |++.+ +|++-+
T Consensus 13 Ii~~~~~~~~~~~~~~~~vFNpav~~~-~~~~~~l~Rv~~~yye~~~~~s~l~ia~s~dg-----i~~~~~e~-ep~~~P 85 (314)
T COG2152 13 IITRSDYIPPHARFIVVSVFNPAVVLV-GGELLLLYRVVEGYYEDHSSISHLRIARSDDG-----IGEFEIEP-EPTLWP 85 (314)
T ss_pred ceeeccccCCCCceeEEEEecceeEEE-CCEEEEEEEEeccccccCccceEEEEEecccC-----CCceecCC-cceEec
Confidence 455543 34555 7899998874 89999999872 2235567889999987 45 99874 788865
Q ss_pred -CCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCccEEEEEEcCCCCCcEEccccc
Q 010428 174 -DAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPL 230 (511)
Q Consensus 174 -p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l 230 (511)
. ..++.....||.|.. -+|+|+|.+.+..+...+..+.-++|+.+|++.+...
T Consensus 86 ~~--~~~e~~G~EDPRvt~--I~~~y~mtYTa~s~~g~~~~la~t~~f~n~~rig~i~ 139 (314)
T COG2152 86 AN--YPYEIYGIEDPRVTK--IGGRYYMTYTAYSDKGPRLALAVTKDFLNWERIGAIF 139 (314)
T ss_pred CC--CchhhhcccCceEEE--ECCEEEEEEEecCCCCcccchhhhhhhhhhhhccccc
Confidence 3 234556778999654 4799999999875444467788999999999887543
|
|
| >smart00640 Glyco_32 Glycosyl hydrolases family 32 | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00028 Score=76.10 Aligned_cols=131 Identities=12% Similarity=0.127 Sum_probs=79.9
Q ss_pred eEEECCEEEEEeeeCC-CCC--CCCCc-EEEEEEeCCCCcceec--CCCCCCCCCccCCCeEeeeEEEcCCCceEEEEec
Q 010428 64 VMIYKGIYHLFYQYNP-KGA--VWGNI-VWAHSTSKDLINWIPH--DPAIYPSQQSDINGCWSGSATILPGEKPAIFYTG 137 (511)
Q Consensus 64 ~~~~~G~YHLFYQ~~P-~~~--~~g~~-~WgHa~S~DLvhW~~~--~~aL~P~~~~D~~g~~SGsav~~~dg~~~l~YTg 137 (511)
++..+|+|||||.-+- ... ..+.. .-.+|+|+|+++|+.. .++|.+...+.....-.+.++..++|+++|++.+
T Consensus 74 av~~~~~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d~~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~~~~~~~~m~~g~ 153 (437)
T smart00640 74 AVIDPGNLSLLYTGNVAIDTNVQVQRQAQQLAASDDLGGTWTKYPGNPVLVPPPGIGTEHFRDPKVFWYDGDKWYMVIGA 153 (437)
T ss_pred EEECCCceEEEEcCCcccccccCcccEEEEEEEECCCCCeeEECCCCcEEeCCCCCCCCCcCCCCccEECCCEEEEEEEE
Confidence 4557888999999763 211 12222 2367889999999997 3666553322222333456655434689999987
Q ss_pred cCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCC-----eEEEEEeee
Q 010428 138 IDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDK-----RWRVIIGSK 205 (511)
Q Consensus 138 ~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g-----~w~m~~ga~ 205 (511)
...+..-.+.++.|+| |++|+.. .++.... .+.....|.-|- +++ -++ +|+|+++..
T Consensus 154 ~~~~~~G~i~ly~S~D-----l~~W~~~--~~~~~~~--~~~~g~~wECPd-lf~-l~~~~~~~~~vLi~s~~ 215 (437)
T smart00640 154 SDEDKTGIALLYRSTD-----LKNWTLL--GELLHSG--VGDTGGMWECPD-LFP-LPGDGDTSKHVLKVSPQ 215 (437)
T ss_pred EecCCCeEEEEEECCC-----cccCeEC--CcccccC--CCCccceEECCc-EEE-eCCCCCceeEEEEECcC
Confidence 6544445577788876 4899875 3555321 011113467786 343 344 899998875
|
|
| >cd08988 GH43_ABN Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.002 Score=65.18 Aligned_cols=150 Identities=10% Similarity=0.169 Sum_probs=85.5
Q ss_pred CccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCC-c-----ceecCCCCCCCCCccCCCeEeeeEEEcCCCc
Q 010428 57 WINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-N-----WIPHDPAIYPSQQSDINGCWSGSATILPGEK 130 (511)
Q Consensus 57 w~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLv-h-----W~~~~~aL~P~~~~D~~g~~SGsav~~~dg~ 130 (511)
-+.-| -+++++|+|||||.....+. ....+|.|+|++.. - |+..++.+.+... +......+++++++||+
T Consensus 56 ~~WAP-~v~~~~G~yylyys~~~~~~--~~~~igva~s~~p~Gp~~~~~w~~~~~i~~~~~~-~~~~~iDp~~f~DdDG~ 131 (279)
T cd08988 56 HLWAP-DIYQHNGKFYLYYSVSAFGS--NTSAIGLAVNKTIDGPSPDYGWEKGGVVISSDAS-DNYNAIDPAIIFDQHGQ 131 (279)
T ss_pred CEecc-eEEEECCEEEEEEEeccCCC--CCceEEEEEcCCCCCCCcCcCccccCceEecCCC-CCCCccCCceEEcCCCC
Confidence 35567 47889999999998775432 24578999999864 3 5443333333322 12345678888888899
Q ss_pred eEEEEeccCCCCcceEEEEEecCCCCcccceeeec-CCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeec---
Q 010428 131 PAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKS-PKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI--- 206 (511)
Q Consensus 131 ~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~-~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~--- 206 (511)
+||+|..... ....+-++.|... .... ....++..+ . +.....-|+ +++ .+|+|||+.++..
T Consensus 132 ~Yl~~g~~~~---gi~~~eL~~d~~~-----~~~~~~~~~i~~~~--~--~~~~~Egp~-i~k-~~g~YYl~~S~g~~~~ 197 (279)
T cd08988 132 PWLSFGSFWG---GIKLFELDKDTMK-----PAEPGELHSIAGRE--R--SSAAIEAPF-ILY-RGDYYYLFVSFGLCCR 197 (279)
T ss_pred EEEEecccCC---CEEEEEECcccCC-----ccCCCcceEEeccC--C--CCCceEeeE-EEE-cCCeEEEEEEcCcccC
Confidence 9999964321 1222233333211 1000 001122221 1 112346787 566 5899999886542
Q ss_pred --CCccEEEEEEcCCCC-CcE
Q 010428 207 --NRKGLAILYRSKDFV-HWI 224 (511)
Q Consensus 207 --~~~G~i~ly~S~Dl~-~W~ 224 (511)
+..-++.+++|+++. -|+
T Consensus 198 ~~~~~y~v~~arS~~~~GPy~ 218 (279)
T cd08988 198 GGDSTYKIAVGRSKNITGPYL 218 (279)
T ss_pred CCCCCeEEEEEEeCCCCCCCC
Confidence 112357889999874 344
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla |
| >cd09003 GH43_AXH_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.0039 Score=64.22 Aligned_cols=146 Identities=10% Similarity=0.094 Sum_probs=84.8
Q ss_pred cCCcceEEEC----CEEEEEeeeCCCCCCCCCcEEEEEEeCCCC-cceec-CCCC-CCCC-Ccc-CCCeEeeeEEEcCCC
Q 010428 59 NDPNGVMIYK----GIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIPH-DPAI-YPSQ-QSD-INGCWSGSATILPGE 129 (511)
Q Consensus 59 NDPnG~~~~~----G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLv-hW~~~-~~aL-~P~~-~~D-~~g~~SGsav~~~dg 129 (511)
.-| -+++++ |+|+|||... ....|.|+|++.. .|+++ +..| .+.. ..+ ...+..+++++++||
T Consensus 79 WAP-~v~~~~~~~~gkyylyy~~~-------~~~igva~SdsP~GP~~~~~g~~l~~~~~~~~~~~~~~iDp~~f~DdDG 150 (311)
T cd09003 79 WAP-SIAVKKINGKGKFYLYFANG-------GGGIGVLTADSPVGPWTDPLGKPLITGSTPGCAGVVWLFDPAVFVDDDG 150 (311)
T ss_pred CCC-ceEEeccCCCCEEEEEEecC-------CCeEEEEEcCCCCCCcccCCCCeeecCCCCCccCCccccCCCeEECCCC
Confidence 346 467888 9999999632 2358999999965 89975 3222 2211 111 112457888888899
Q ss_pred ceEEEEeccCC----CCcceEEEEEec-CCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEee
Q 010428 130 KPAIFYTGIDP----HNRQVQNLAVPK-NLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGS 204 (511)
Q Consensus 130 ~~~l~YTg~~~----~~~q~q~lA~s~-d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga 204 (511)
+.||+|.+... ...+...+|.-+ |. .+. .+.++.... + ..+.-|. +++ .+|+|||++++
T Consensus 151 ~~Yl~~g~~~~~~~~~~~~~i~i~~l~~D~-----~~~---~g~~~~i~~--~----~~~Egp~-~~K-~~G~YYL~ys~ 214 (311)
T cd09003 151 QGYLYFGGGVPGGRWANPNTARVIKLGDDM-----ISV---DGSAVTIDA--P----YFFEASG-LHK-INGTYYYSYCT 214 (311)
T ss_pred CEEEEECCccCCCccccCCCEEEEEeCCCc-----eec---cCCceEccC--C----CceEeee-EEE-ECCEEEEEEeC
Confidence 99999975321 112234444333 32 222 223332211 1 2356787 466 68999998875
Q ss_pred ec-------CCccEEEEEEcCCCC-CcEEccc
Q 010428 205 KI-------NRKGLAILYRSKDFV-HWIKAKH 228 (511)
Q Consensus 205 ~~-------~~~G~i~ly~S~Dl~-~W~~~~~ 228 (511)
.- ....++.+++|++.. -|+..+.
T Consensus 215 ~~~~~~~~~~~~y~v~y~~s~~~~GP~~~~g~ 246 (311)
T cd09003 215 NFGGRDPGKPPPGRIAYMTSKNPMGPFTYKGI 246 (311)
T ss_pred CCCccCCCCCCceeEEEEEcCCCCCCcccCCE
Confidence 41 223466777887754 5776443
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose |
| >cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.002 Score=64.81 Aligned_cols=134 Identities=12% Similarity=0.054 Sum_probs=80.8
Q ss_pred ccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCC-cceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEEEe
Q 010428 58 INDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYT 136 (511)
Q Consensus 58 ~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLv-hW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~l~YT 136 (511)
+.-| -+++.+|+|||||-.+. ...+.++|++.. .|++.+... ....+++++++||+.||+|.
T Consensus 76 ~WAP-~v~~~~gkyy~yys~~~-------~~~~v~~a~~p~Gpw~~~~~~~---------~~iDp~~f~D~dG~~Yl~~~ 138 (269)
T cd09001 76 QWAP-SLRYHNGTFYVFFCTNT-------GGTYIYTADDPEGPWTKTALDG---------GYHDPSLLFDDDGTAYLVYG 138 (269)
T ss_pred EECC-ceEEECCEEEEEEEecC-------CCeEEEEcCCCCCCCcCCCcCC---------CcccCceEEcCCCCEEEEeC
Confidence 4567 47889999999998751 135677777754 787765322 23457788878999999986
Q ss_pred ccCCCCcceEEEE-EecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCccEEEEE
Q 010428 137 GIDPHNRQVQNLA-VPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILY 215 (511)
Q Consensus 137 g~~~~~~q~q~lA-~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~ly 215 (511)
+. .+.++ ++.|. ..... ....++..+ .. ......-|+ +++ .+|+|||++++.......+.++
T Consensus 139 ~~------~i~~~~l~~d~-----~~~~~-~~~~~~~~~--~~-~~~~~Egp~-i~k-~~G~YYl~~S~~~~~~~~~~~~ 201 (269)
T cd09001 139 GG------TIRLVELSPDL-----TGVGG-KDQVIIDAG--EE-IGLGAEGSH-LYK-INGYYYIFNIAWGGGGRTQTCL 201 (269)
T ss_pred CC------cEEEEEECccc-----CCcCC-CceEEEeCC--Cc-cccccccCe-EEE-ECCEEEEEEecCCCCCceEEEE
Confidence 53 23333 33332 22211 112233333 10 112356787 456 6899999988653223356788
Q ss_pred EcCCCC-CcEE
Q 010428 216 RSKDFV-HWIK 225 (511)
Q Consensus 216 ~S~Dl~-~W~~ 225 (511)
+|+++. -|+.
T Consensus 202 ~s~~~~GP~~~ 212 (269)
T cd09001 202 RSKSLTGPYES 212 (269)
T ss_pred EeCCCCCCcCC
Confidence 998864 3543
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend |
| >cd08980 GH43_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0036 Score=63.38 Aligned_cols=146 Identities=14% Similarity=0.131 Sum_probs=81.3
Q ss_pred CCCCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCC-CCCCCCCccCC--CeEeeeEEEcCCCc
Q 010428 54 PKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDP-AIYPSQQSDIN--GCWSGSATILPGEK 130 (511)
Q Consensus 54 ~~gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~-aL~P~~~~D~~--g~~SGsav~~~dg~ 130 (511)
...+..||+ ++.++|+++|||...-.....+..-|....+ |...+...+. ...|...|+.. ++.-|+.++..+|.
T Consensus 109 ~~~~~iDp~-~~~ddG~~Yl~~~~~~~~~~~~~~i~~~~l~-~~~~~~g~~~~i~~p~~~we~~~~~~~EgP~~~k~~G~ 186 (288)
T cd08980 109 TDRWAIDGT-VFEHNGQLYFVWSGWEGRTNGNQNLYIAKMS-NPWTLTGPRVLISRPEYDWERQGPGVNEGPAALKRNGK 186 (288)
T ss_pred CCCeeeeeE-EEEECCEEEEEEEccCCCCCCCccEEEEECC-CCCccCCcceEecCCCCCceecCceeeECcEEEEECCE
Confidence 356778994 6667899999986432211112223443333 3334542222 23444445543 45667777777999
Q ss_pred eEEEEeccCC-CCcceEEEEEecCCCCccc-ceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCe-EEEEEeee
Q 010428 131 PAIFYTGIDP-HNRQVQNLAVPKNLSDPYL-REWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKR-WRVIIGSK 205 (511)
Q Consensus 131 ~~l~YTg~~~-~~~q~q~lA~s~d~~d~~l-~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~-w~m~~ga~ 205 (511)
+||+|.+... ...-..++|+++...+++- ..|+|. .+||+.......+. .--... ++..++|+ |||++=+.
T Consensus 187 yYl~yS~~~~~~~~Y~v~~a~~~~~~~~~~~~~~~~~-~~pil~~~~~~~~~--g~GH~~-iv~~~~G~~~~~~yH~~ 260 (288)
T cd08980 187 VFLTYSASGSWTPDYCLGLLTADGGADLLDPASWTKS-PTPVFQSSPENGVY--GPGHNS-FTKSPDGTEDWIVYHAR 260 (288)
T ss_pred EEEEEECCCCCCCCCEEEEEEEcCCCCCCChhhCcCC-CCCceecCCCCccC--cCCccc-eEECCCCCEEEEEEccc
Confidence 9999998654 3344567788765433311 258886 47988643101111 112333 34556787 88887543
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.012 Score=57.75 Aligned_cols=185 Identities=16% Similarity=0.275 Sum_probs=102.5
Q ss_pred ccCCCCCc--cCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCccCCCeEeeeEEE-cC
Q 010428 51 FQPPKNWI--NDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATI-LP 127 (511)
Q Consensus 51 f~p~~gw~--NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D~~g~~SGsav~-~~ 127 (511)
.+|+.||. .|| -+++++|+||+|....-.+..||.|..+ -+-+|.+..-|= ..--+. +.-.+.++. .+
T Consensus 16 ~~Pk~g~~slKD~-T~V~ynGk~~VyAtt~d~~~~y~sm~f~-----~Ftdws~~~sA~--q~~m~~-~~vAP~vFYFaP 86 (271)
T PF03664_consen 16 AQPKSGWVSLKDF-TIVPYNGKHHVYATTADTGGGYGSMNFG-----PFTDWSQMASAS--QNYMDQ-SAVAPQVFYFAP 86 (271)
T ss_pred ccCCCCceeccCc-eEEeECCEEEEEEEeccCCCccceEeee-----ccCCHHHhhccc--cccCCc-ccccceEEEecC
Confidence 45777886 599 5889999999999987555555544433 455787765432 111121 122233322 25
Q ss_pred CCceEEEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecC
Q 010428 128 GEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN 207 (511)
Q Consensus 128 dg~~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~ 207 (511)
.+.+||.|.-... .-...++.|.++| ..|... .|++... ..+ .....-|..||- ++..-||+.+..
T Consensus 87 k~~W~L~yQwg~~----~fsY~Ts~Dptnp--ngWSap--q~lf~g~-i~~-~~~g~iD~~vI~--D~~n~yLFfa~D-- 152 (271)
T PF03664_consen 87 KNIWYLAYQWGPA----AFSYSTSSDPTNP--NGWSAP--QPLFSGS-ISG-SGTGPIDQWVIC--DDTNMYLFFAGD-- 152 (271)
T ss_pred CcEEEEEEecCCC----cceeecCCCCCCC--ccCCCC--ccccccc-ccC-CCCCceeeEEEe--cCCceEEEEcCC--
Confidence 7778888863221 1123456676666 468763 4665321 011 123457988653 344556666542
Q ss_pred CccEEEEEEcCC-CCCcEE-cc---cccccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCC
Q 010428 208 RKGLAILYRSKD-FVHWIK-AK---HPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD 274 (511)
Q Consensus 208 ~~G~i~ly~S~D-l~~W~~-~~---~~l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~ 274 (511)
.|. ||||.- +.+.-. .+ ..+.+......+|.++++++. |. .++.|++...+
T Consensus 153 -nGk--iYRs~~~i~nFP~~fgs~~~vvmsd~~~nLFEA~~VYkv~--G~-----------~~YLmiVEaiG 208 (271)
T PF03664_consen 153 -NGK--IYRSSMPIGNFPGGFGSSYTVVMSDTRNNLFEAVQVYKVK--GQ-----------NQYLMIVEAIG 208 (271)
T ss_pred -CCc--EEEeccchhhCCCCCCCceEEEEecCccceeeeeEEEEEc--CC-----------ceEEEEEEEec
Confidence 353 788743 222210 01 112222234589999999997 41 27777776543
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process |
| >cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.012 Score=59.54 Aligned_cols=146 Identities=14% Similarity=0.014 Sum_probs=85.4
Q ss_pred CCCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCC-cceecCCCCCCCCCccCCCeEeeeEEEcCCCceEE
Q 010428 55 KNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAI 133 (511)
Q Consensus 55 ~gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLv-hW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~l 133 (511)
.+-+.-| -+++.+|+|||||...... +....+.++|+|.- -|++. .+.+. .+..++++.++||+.||
T Consensus 65 ~~~~WAP-~v~~~~g~yy~yy~~~~~~---~~~~~~v~~s~~p~gpw~~~--~~~~~------~~iDp~vf~d~dG~~Y~ 132 (288)
T cd09000 65 SGGIWAP-TIRYHDGTFYLITTNVDGM---KDGGNFIVTADDPAGPWSDP--VWLDS------GGIDPSLFFDDDGKVYL 132 (288)
T ss_pred CCceEcc-eEEEECCEEEEEEEecCCC---CCCceEEEEeCCCCCCCcCC--EecCC------CccCCceeEcCCCCEEE
Confidence 3445567 4788999999999976532 23456678898873 68742 12221 34568888877899999
Q ss_pred EEeccCCC----CcceEEEEEecCCCCcccceeeecCCCc--eecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeec-
Q 010428 134 FYTGIDPH----NRQVQNLAVPKNLSDPYLREWVKSPKNP--LMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI- 206 (511)
Q Consensus 134 ~YTg~~~~----~~q~q~lA~s~d~~d~~l~~w~K~~~nP--Vi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~- 206 (511)
+|...... ....+.++..+.. .++- ...| +.... . .....-|. +++ .+|+|||++....
T Consensus 133 ~~~~~~~~~~~~~~~~i~~~~l~~~------~~~~-~~~~~~~~~~~--~---~~~~Egp~-v~k-~~g~YYl~ys~~~~ 198 (288)
T cd09000 133 VGNGWDERRGYNGHGGIWLQEIDLE------TGKL-LGEPKVIWNGT--G---GRWPEGPH-LYK-RDGWYYLLIAEGGT 198 (288)
T ss_pred EecccCCccccCCCCcEEEEEEccc------cCCC-CCCcEEEEeCC--C---CCCcccCe-EEE-ECCEEEEEEecCCC
Confidence 88653221 1233444433221 1221 1222 22111 0 12345787 466 6899999986543
Q ss_pred CCccEEEEEEcCCCC-CcEEc
Q 010428 207 NRKGLAILYRSKDFV-HWIKA 226 (511)
Q Consensus 207 ~~~G~i~ly~S~Dl~-~W~~~ 226 (511)
...-.+.+++|+++. .|+..
T Consensus 199 ~~~~~v~~~~s~~~~Gp~~~~ 219 (288)
T cd09000 199 GYGHSVTVARSRSITGPYEPA 219 (288)
T ss_pred CCCeEEEEEEeCCCCCCCccC
Confidence 222367889999986 67653
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend |
| >cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.022 Score=59.06 Aligned_cols=165 Identities=16% Similarity=0.254 Sum_probs=97.9
Q ss_pred CCCCccccccCC---CCCccCCcceEEEC-CEEEEEeeeCCCCC-------CCCCcEEEEEEeCCC-CcceecCCCCCCC
Q 010428 43 QPYRTGYHFQPP---KNWINDPNGVMIYK-GIYHLFYQYNPKGA-------VWGNIVWAHSTSKDL-INWIPHDPAIYPS 110 (511)
Q Consensus 43 ~~~Rp~yHf~p~---~gw~NDPnG~~~~~-G~YHLFYQ~~P~~~-------~~g~~~WgHa~S~DL-vhW~~~~~aL~P~ 110 (511)
..|.+.--+... ...+.||. ++... |+.+|||...+... .+...+..+..|+|. .+|... ..|.+.
T Consensus 58 ~tW~~~~~i~~~~~~~~~~~~p~-~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G~tW~~p-~~l~~~ 135 (351)
T cd00260 58 KTWSPSTVISDGDGKSSRVKDPT-VVVDGLGRVFLLVGSFPNGEGEDNDYAGPSNAYLVLVYSDDDGITWSSP-RDLTPS 135 (351)
T ss_pred CcccccEEehhcCCCCCcEEcce-EEEcCCCCEEEEEEECCCcccccccccCCCceEEEEEEEEcCCceecCC-ccCCcc
Confidence 355554333332 24567894 66666 99999999887642 223556778888886 899753 333333
Q ss_pred CC-ccCCCeE--eeeEEEcCCCceEEEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCC
Q 010428 111 QQ-SDINGCW--SGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDP 187 (511)
Q Consensus 111 ~~-~D~~g~~--SGsav~~~dg~~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP 187 (511)
.. .+-...+ .|+.++..+|++++.+.+....+.....+.+|+|.+ ++|+... ++ .. ......|
T Consensus 136 ~~~~~~~~~~~~~g~gi~l~~Grlv~p~~~~~~~~~~~~~~~~S~D~G----~tW~~~~--~~-~~-------~~~~~e~ 201 (351)
T cd00260 136 VKGDNWAALFTGPGSGIQMKDGRLVFPVYGGNAGGRVSSAIIYSDDSG----KTWKLGE--GV-ND-------AGGCSEC 201 (351)
T ss_pred ccCcceeEEEecCcCeEEecCCcEEEEEEEEcCCCCEEEEEEEECCCC----CCcEECC--CC-CC-------CCCCcCC
Confidence 21 0111222 234555668998776554433344566777888875 7997632 11 11 0123467
Q ss_pred EEEEeCCCCeEEEEEeeecCCccEEEEEEcCCC-CCcEEc
Q 010428 188 TTAWLGPDKRWRVIIGSKINRKGLAILYRSKDF-VHWIKA 226 (511)
Q Consensus 188 ~vvw~~~~g~w~m~~ga~~~~~G~i~ly~S~Dl-~~W~~~ 226 (511)
.++-. .+|..+|+..... .+.+.++.|.|. .+|+..
T Consensus 202 ~i~el-~dG~l~~~~R~~~--~~~~~~~~S~D~G~tWs~~ 238 (351)
T cd00260 202 SVVEL-SDGKLYMYTRDNS--GGRRPVYESRDMGTTWTEA 238 (351)
T ss_pred EEEEe-cCCEEEEEEeeCC--CCcEEEEEEcCCCcCcccC
Confidence 75543 5888888766542 466778888775 899854
|
They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases. |
| >PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0052 Score=61.25 Aligned_cols=148 Identities=19% Similarity=0.294 Sum_probs=87.8
Q ss_pred ccCCcceEE-ECCEEEEEeeeCCCCCCCCCcEEEEEEeCC-CCcceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEE-
Q 010428 58 INDPNGVMI-YKGIYHLFYQYNPKGAVWGNIVWAHSTSKD-LINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIF- 134 (511)
Q Consensus 58 ~NDPnG~~~-~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~D-LvhW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~l~- 134 (511)
..||. +++ .+|+.||||........|......+.+|+| ..+|+... .|.+.......+...+.++...+|++++-
T Consensus 48 ~~~p~-~~~~~~g~l~l~~~~~~~~~~~~~~~~~~~~S~D~G~TWs~~~-~l~~~~~~~~~~~~~~~~i~~~~G~l~~~~ 125 (275)
T PF13088_consen 48 YGNPS-LVVDPDGRLWLFYSAGSSGGGWSGSRIYYSRSTDGGKTWSEPT-DLPPGWFGNFSGPGRGPPIQLPDGRLIAPY 125 (275)
T ss_dssp EEEEE-EEEETTSEEEEEEEEEETTESCCTCEEEEEEESSTTSS-EEEE-EEHHHCCCSCEECSEEEEEEECTTEEEEEE
T ss_pred ccCcE-EEEeCCCCEEEEEEEccCCCCCCceeEEEEEECCCCCCCCCcc-ccccccccceeccceeeeeEecCCCEEEEE
Confidence 45784 444 599999999766655555555555599999 89999764 22222111223444555556678887775
Q ss_pred EeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCccEEEE
Q 010428 135 YTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAIL 214 (511)
Q Consensus 135 YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~l 214 (511)
|.. ........+.+|+|++ ++|+... ++... ...--|.++.. .+|..+|++... ..+.+.+
T Consensus 126 ~~~--~~~~~~~~~~~S~D~G----~tW~~~~--~~~~~--------~~~~e~~~~~~-~dG~l~~~~R~~--~~~~~~~ 186 (275)
T PF13088_consen 126 YHE--SGGSFSAFVYYSDDGG----KTWSSGS--PIPDG--------QGECEPSIVEL-PDGRLLAVFRTE--GNDDIYI 186 (275)
T ss_dssp EEE--SSCEEEEEEEEESSTT----SSEEEEE--ECECS--------EEEEEEEEEEE-TTSEEEEEEEEC--SSTEEEE
T ss_pred eec--cccCcceEEEEeCCCC----ceeeccc--ccccc--------CCcceeEEEEC-CCCcEEEEEEcc--CCCcEEE
Confidence 433 1233566778899875 8998752 22110 01224443333 688888877653 2236778
Q ss_pred EEcCC-CCCcEEc
Q 010428 215 YRSKD-FVHWIKA 226 (511)
Q Consensus 215 y~S~D-l~~W~~~ 226 (511)
++|.| ..+|+..
T Consensus 187 ~~S~D~G~TWs~~ 199 (275)
T PF13088_consen 187 SRSTDGGRTWSPP 199 (275)
T ss_dssp EEESSTTSS-EEE
T ss_pred EEECCCCCcCCCc
Confidence 88877 7899863
|
... |
| >cd08982 GH43_3 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.03 Score=57.31 Aligned_cols=80 Identities=11% Similarity=0.079 Sum_probs=48.7
Q ss_pred CeEeeeEEEcCCCceEEEEeccCCC-CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCC
Q 010428 117 GCWSGSATILPGEKPAIFYTGIDPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPD 195 (511)
Q Consensus 117 g~~SGsav~~~dg~~~l~YTg~~~~-~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~ 195 (511)
++.-|..+...+|++||+|++.... ..-.+.+|+|++..+ .|++...|||+..+ .+. ...--...+ ++..+
T Consensus 159 ~~~EGP~i~k~~G~YYL~yS~~~~~~~~Y~v~~a~s~~p~G----P~~~~~~~pil~~~--~~~-~~g~GH~s~-v~~~~ 230 (295)
T cd08982 159 PWMEGAWMTKHNGKYYLQYAAPGTEFNTYADGVYVSDSPLG----PFTYQPHNPFSYKP--GGF-ITGAGHGST-FQDKY 230 (295)
T ss_pred ccccccEEEEECCEEEEEEeCCCcccCcEeEEEEEeCCCCC----CCCcCCCCccccCC--CCe-EecCCcccE-EECCC
Confidence 3556777777899999999865432 223567889887644 46665578988644 210 011122333 45577
Q ss_pred CeEEEEEee
Q 010428 196 KRWRVIIGS 204 (511)
Q Consensus 196 g~w~m~~ga 204 (511)
|.||++.=+
T Consensus 231 G~~~~~yh~ 239 (295)
T cd08982 231 GNYWHVGTM 239 (295)
T ss_pred CCEEEEEEE
Confidence 888887643
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.1 Score=53.05 Aligned_cols=144 Identities=13% Similarity=0.203 Sum_probs=80.1
Q ss_pred ccCCcceEEE--CCEEEEEeeeCCCCCCCCCcEEEEEEeCCCC---cceecCCCCCCCCCccCCCeEeeeEEEcCCCceE
Q 010428 58 INDPNGVMIY--KGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI---NWIPHDPAIYPSQQSDINGCWSGSATILPGEKPA 132 (511)
Q Consensus 58 ~NDPnG~~~~--~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLv---hW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~ 132 (511)
..-|. ++|+ +++|+|+||+.+ ...++|+|.. .|....+.+.........|...-.+ +.+|+++|
T Consensus 78 fwAPq-Vfyf~pk~kwYL~Yq~~~---------~~yaTs~dp~~P~~ws~~qpl~~~~~~~~~~~~ID~~v-I~Dd~~~Y 146 (303)
T cd08987 78 RVAPQ-VFYFAPQNKWYLIYQWWP---------AAYSTNSDISNPNGWSAPQPLFSGTPNGSPGGWIDFWV-ICDDTNCY 146 (303)
T ss_pred cccCE-EeeeccCCEEEEEEecCc---------eEEEeCCCCCCCCccCCCcccccCcccCCCCCccceeE-EeCCCCEE
Confidence 34674 6655 599999999732 5689999975 5876655443322222234444555 56789999
Q ss_pred EEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCC--eEEEEEeeecCCcc
Q 010428 133 IFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDK--RWRVIIGSKINRKG 210 (511)
Q Consensus 133 l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g--~w~m~~ga~~~~~G 210 (511)
||+.+-+. .+..|-...+ .|-....+++.... .+....-|.-|.| ++ .+| +|+|++-+.....+
T Consensus 147 Lff~~dnG----~iyra~~~~~------nFp~~~~~~~~~~~--~~~~~~lfEa~~V-yk-v~G~~~YlmiveA~g~~~~ 212 (303)
T cd08987 147 LFFSDDNG----KLYRSSTTLG------NFPNGGTETVIIMS--DSNKNNLFEASNV-YK-VKGQNQYLLIVEAIGSDGG 212 (303)
T ss_pred EEEecCCC----eEEEEecchh------hCCCCCCccEEEec--CCCccccceeeEE-EE-ECCCeEEEEEEEecCCCCC
Confidence 99987432 3444433221 12111122332111 0111245778874 55 455 99999987642112
Q ss_pred E-EEEEEcCCCC-CcEEc
Q 010428 211 L-AILYRSKDFV-HWIKA 226 (511)
Q Consensus 211 ~-i~ly~S~Dl~-~W~~~ 226 (511)
+ ..-++|+.|- .|+..
T Consensus 213 rYfrs~Ts~Sl~GpWt~~ 230 (303)
T cd08987 213 RYFRSWTATSLDGPWTPL 230 (303)
T ss_pred CeEEEEEcCCCCCCceec
Confidence 1 1226677764 79875
|
The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr |
| >PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure [] | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.14 Score=52.60 Aligned_cols=114 Identities=18% Similarity=0.183 Sum_probs=68.5
Q ss_pred EEcCCCceEEEEeccCC---CCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEE
Q 010428 124 TILPGEKPAIFYTGIDP---HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRV 200 (511)
Q Consensus 124 v~~~dg~~~l~YTg~~~---~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m 200 (511)
++..+|+|+|||--+.. .+...-+.|+|+| |++|+.. .++|.+. ..++....-...++.. ++.++|
T Consensus 15 ~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~D-----lv~W~~~--~~aL~P~--~~~d~~g~~SGs~~~~--~~~~~~ 83 (308)
T PF00251_consen 15 LVYYDGKYHLFYQYNPFGPEWGNMHWGHATSKD-----LVHWEHL--PVALPPD--EEYDADGCFSGSAVVD--DDNLVL 83 (308)
T ss_dssp EEEETTEEEEEEEEETTSSSS-SBEEEEEEESS-----SSSEEEE--EEEE-SS--SGGGTTEEEEEEEEEE--TTCEEE
T ss_pred CeEeCCEEEEEeccCCCCcccceeEEEEEECCC-----CCCceeC--CceEccc--ccCCcCccCcceEEEE--CCEEEE
Confidence 34469999999976543 1345678999998 4899986 3666544 2222222223333333 447888
Q ss_pred EEeeecC-CccEEEEEEc-CCCCCcEEcc--cccccC---CCCCceecCceEEec
Q 010428 201 IIGSKIN-RKGLAILYRS-KDFVHWIKAK--HPLHSV---KGTGMWECPDFFPVS 248 (511)
Q Consensus 201 ~~ga~~~-~~G~i~ly~S-~Dl~~W~~~~--~~l~~~---~~~g~wECPdlf~l~ 248 (511)
++.+... ......++.| +|..+|+... .|+... ....-|.=|.+|-..
T Consensus 84 ~YTg~~~~~~~~q~~A~s~d~~~~w~k~~~~~pvi~~~p~~~~~~~RDP~v~~~~ 138 (308)
T PF00251_consen 84 FYTGNNRDGKQVQCLAYSTDDGITWTKYPQGNPVIPEPPPGDTTDFRDPKVFWRE 138 (308)
T ss_dssp EEEEEETTTEEEEEEEEESSTTSSEEE-TTTCESBESSSTTSCTSEEEEEEEEEC
T ss_pred EEeccCCCCCeEEEEEEECCCCCceEEcCCCCcEEEecccCCCCccccCeEEEec
Confidence 8876653 2344556777 8899999864 455432 123357777776544
|
; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A .... |
| >PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.22 Score=49.48 Aligned_cols=161 Identities=15% Similarity=0.076 Sum_probs=85.1
Q ss_pred CEEEEEeeeCCCCCCCCCcEEEEEEe--CCC-CcceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEEEeccCCC---C
Q 010428 69 GIYHLFYQYNPKGAVWGNIVWAHSTS--KDL-INWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPH---N 142 (511)
Q Consensus 69 G~YHLFYQ~~P~~~~~g~~~WgHa~S--~DL-vhW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~l~YTg~~~~---~ 142 (511)
|+...++.. +...+.....-..| +|. .+|.....+..+. -....+..++++.+++|+++|+|+..... .
T Consensus 1 G~l~a~~~~---~~~~~~~d~~i~~S~s~D~G~tWs~~~~v~~~~--~~~~~~~~p~~~~~~~g~l~l~~~~~~~~~~~~ 75 (275)
T PF13088_consen 1 GRLLAVWEG---GSDEGAIDIVIRRSRSTDGGKTWSEPRIVADGP--KPGRRYGNPSLVVDPDGRLWLFYSAGSSGGGWS 75 (275)
T ss_dssp SEEEEEEEE---SSCSCCEEEEEEEECCCCCTTEEEEEEEEETST--BTTCEEEEEEEEEETTSEEEEEEEEEETTESCC
T ss_pred CeEEEEEEC---CcccCCCCEEEEEEEeeCCCCeeCCCEEEeecc--ccCCcccCcEEEEeCCCCEEEEEEEccCCCCCC
Confidence 456666665 33344444544555 987 8899865444333 11245677777766799999999544321 1
Q ss_pred cceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCccEEEEEEc-CCCC
Q 010428 143 RQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRS-KDFV 221 (511)
Q Consensus 143 ~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~ly~S-~Dl~ 221 (511)
.......+|.|++ ++|.+.. .|...+ ........+.+- +-. .+|.+++..-........+.++.| +..+
T Consensus 76 ~~~~~~~~S~D~G----~TWs~~~--~l~~~~--~~~~~~~~~~~~-i~~-~~G~l~~~~~~~~~~~~~~~~~~S~D~G~ 145 (275)
T PF13088_consen 76 GSRIYYSRSTDGG----KTWSEPT--DLPPGW--FGNFSGPGRGPP-IQL-PDGRLIAPYYHESGGSFSAFVYYSDDGGK 145 (275)
T ss_dssp TCEEEEEEESSTT----SS-EEEE--EEHHHC--CCSCEECSEEEE-EEE-CTTEEEEEEEEESSCEEEEEEEEESSTTS
T ss_pred ceeEEEEEECCCC----CCCCCcc--cccccc--ccceeccceeee-eEe-cCCCEEEEEeeccccCcceEEEEeCCCCc
Confidence 2222338899875 8999753 333221 111111233432 333 588877763222223344555555 5578
Q ss_pred CcEEcccccccCCCCCceecCceEEec
Q 010428 222 HWIKAKHPLHSVKGTGMWECPDFFPVS 248 (511)
Q Consensus 222 ~W~~~~~~l~~~~~~g~wECPdlf~l~ 248 (511)
.|+.... +. .....--|.++++.
T Consensus 146 tW~~~~~-~~---~~~~~~e~~~~~~~ 168 (275)
T PF13088_consen 146 TWSSGSP-IP---DGQGECEPSIVELP 168 (275)
T ss_dssp SEEEEEE-CE---CSEEEEEEEEEEET
T ss_pred eeecccc-cc---ccCCcceeEEEECC
Confidence 9987543 21 11122236666665
|
... |
| >cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions | Back alignment and domain information |
|---|
Probab=94.98 E-value=5 Score=41.49 Aligned_cols=171 Identities=13% Similarity=0.096 Sum_probs=91.3
Q ss_pred eEEECCEEEEEeeeCCC-CCCCC-CcEEEEEEeCCC-CcceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEEEeccCC
Q 010428 64 VMIYKGIYHLFYQYNPK-GAVWG-NIVWAHSTSKDL-INWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDP 140 (511)
Q Consensus 64 ~~~~~G~YHLFYQ~~P~-~~~~g-~~~WgHa~S~DL-vhW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~l~YTg~~~ 140 (511)
++..++..-.|+-.... ....+ .+....+.|.|. .+|.... ++..... ....++.++.+.+.+|+++|||.....
T Consensus 21 l~~~~~~lla~~e~r~~~~~D~~~~~~iv~~~S~D~G~tW~~~~-~i~~~~~-~~~~~~~p~~v~~~~g~l~l~~~~~~~ 98 (351)
T cd00260 21 LVCTPGTLLAFADARYGGCSDRSNAIDIVARRSTDGGKTWSPST-VISDGDG-KSSRVKDPTVVVDGLGRVFLLVGSFPN 98 (351)
T ss_pred EEEECCEEEEEEEEEEcCCCCCCcccceeEEEeccCCCcccccE-EehhcCC-CCCcEEcceEEEcCCCCEEEEEEECCC
Confidence 33344444444442222 22344 567888889874 8999863 3333322 234577888887544899999977543
Q ss_pred C----------CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCE-EEEeCCCCeEEEEEeeecCC-
Q 010428 141 H----------NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPT-TAWLGPDKRWRVIIGSKINR- 208 (511)
Q Consensus 141 ~----------~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~-vvw~~~~g~w~m~~ga~~~~- 208 (511)
. ....+.+..|+|.+ .+|.+. ..+........+ ..-++-|- .+-. ++|+++|.+-.....
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~S~D~G----~tW~~p--~~l~~~~~~~~~-~~~~~~~g~gi~l-~~Grlv~p~~~~~~~~ 170 (351)
T cd00260 99 GEGEDNDYAGPSNAYLVLVYSDDDG----ITWSSP--RDLTPSVKGDNW-AALFTGPGSGIQM-KDGRLVFPVYGGNAGG 170 (351)
T ss_pred cccccccccCCCceEEEEEEEEcCC----ceecCC--ccCCccccCcce-eEEEecCcCeEEe-cCCcEEEEEEEEcCCC
Confidence 1 23467788898875 799863 222221100011 11123331 1223 478887766544322
Q ss_pred -ccEEEEEEcCCCCCcEEcccccccCCCCCceecCceEEec
Q 010428 209 -KGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVS 248 (511)
Q Consensus 209 -~G~i~ly~S~Dl~~W~~~~~~l~~~~~~g~wECPdlf~l~ 248 (511)
.-...+|..++.++|+.. ..... ..++.| |.++++.
T Consensus 171 ~~~~~~~~S~D~G~tW~~~-~~~~~--~~~~~e-~~i~el~ 207 (351)
T cd00260 171 RVSSAIIYSDDSGKTWKLG-EGVND--AGGCSE-CSVVELS 207 (351)
T ss_pred CEEEEEEEECCCCCCcEEC-CCCCC--CCCCcC-CEEEEec
Confidence 223445555667999863 32211 123445 7788885
|
They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases. |
| >PF13859 BNR_3: BNR repeat-like domain; PDB: 3B69_A | Back alignment and domain information |
|---|
Probab=93.57 E-value=0.39 Score=49.64 Aligned_cols=148 Identities=16% Similarity=0.210 Sum_probs=70.4
Q ss_pred CCcceEEECCEEEEEe-eeCCCCCCCCCcEEEEEEeCC-CCcceecCCCCCCC-CCccCCCeE--eeeEEEcCCCceEEE
Q 010428 60 DPNGVMIYKGIYHLFY-QYNPKGAVWGNIVWAHSTSKD-LINWIPHDPAIYPS-QQSDINGCW--SGSATILPGEKPAIF 134 (511)
Q Consensus 60 DPnG~~~~~G~YHLFY-Q~~P~~~~~g~~~WgHa~S~D-LvhW~~~~~aL~P~-~~~D~~g~~--SGsav~~~dg~~~l~ 134 (511)
.|-- +..++..+|+- .|+... ....-..-++.|+| .+.|.+....+... +... ... -||.|+.+||++++=
T Consensus 62 rPTt-vvkgn~IymLvG~y~~~~-~~~~~~llLvks~~~g~~W~~~~~l~~~~~~~~~--~figgGGSGV~m~dGTLVFP 137 (310)
T PF13859_consen 62 RPTT-VVKGNKIYMLVGSYSRSA-GADDWGLLLVKSTDGGIKWGDTKSLPSTSFQSWK--QFIGGGGSGVVMEDGTLVFP 137 (310)
T ss_dssp EEEE-EEETTEEEEEEEEESS---SSTTEEEEEEEEESSSSEE---EE-GGGS-EEEE--EEEE-SEE-EE-TTS-EEEE
T ss_pred eeee-eecceeEEEEEEEEeccc-cccccceeeeeccCCcceeeecccCCchhccccc--eeecCCCCceEEcCCCEEEE
Confidence 5643 33455555554 455321 11111223456665 46898653221111 1111 111 156667789998876
Q ss_pred EeccCCCCc-ceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCccEEE
Q 010428 135 YTGIDPHNR-QVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAI 213 (511)
Q Consensus 135 YTg~~~~~~-q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~ 213 (511)
-.+...... ..-.|.+|+|.+ .+|+-..+ ......+||.|+.. ++|+-.|+.... .|+-.
T Consensus 138 v~a~~~~~~~~~SlIiYS~d~g----~~W~lskg-----------~s~~gC~~psv~EW-e~gkLlM~~~c~---~g~rr 198 (310)
T PF13859_consen 138 VQATKKNGDGTVSLIIYSTDDG----KTWKLSKG-----------MSPAGCSDPSVVEW-EDGKLLMMTACD---DGRRR 198 (310)
T ss_dssp EEEEETT---EEEEEEEESSTT----SS-EE-S---------------TT-EEEEEEEE--TTEEEEEEE-T---TS---
T ss_pred EeeeccCccceEEEEEEECCCc----cceEeccc-----------cCCCCcceEEEEec-cCCeeEEEEecc---cceEE
Confidence 666555444 366778998854 68875421 22245789998766 578888776542 35557
Q ss_pred EEEcCCC-CCcEEccccc
Q 010428 214 LYRSKDF-VHWIKAKHPL 230 (511)
Q Consensus 214 ly~S~Dl-~~W~~~~~~l 230 (511)
+|+|.|. ..|+..-..|
T Consensus 199 VYeS~DmG~tWtea~gtl 216 (310)
T PF13859_consen 199 VYESGDMGTTWTEALGTL 216 (310)
T ss_dssp EEEESSTTSS-EE-TTTT
T ss_pred EEEEcccceehhhccCcc
Confidence 9999886 6899744333
|
|
| >PF08244 Glyco_hydro_32C: Glycosyl hydrolases family 32 C terminal; InterPro: IPR013189 This domain corresponds to the C-terminal domain of glycosyl hydrolase family 32 | Back alignment and domain information |
|---|
Probab=92.09 E-value=0.08 Score=43.62 Aligned_cols=37 Identities=30% Similarity=0.284 Sum_probs=30.9
Q ss_pred cccceeEEeecCCCceeeEEEEEEEeCCCCcEEEEEecCCCCcc
Q 010428 443 LGPFGLLALASKDLKEYTAVFFRIFKGEDNKFVVLMCSDQSRSL 486 (511)
Q Consensus 443 ~g~~Gl~v~~s~~~~E~t~i~f~~~~~~~~~~~~~~~~d~~~Ss 486 (511)
..+||+.++++++..|.|.|+|+.... .|++||++|+
T Consensus 8 ~~~~g~~l~~s~~~~e~~~i~~d~~~~-------~l~vDR~~s~ 44 (86)
T PF08244_consen 8 ADSFGLRLRASNDGGEETSIGYDPANG-------TLTVDRTNSG 44 (86)
T ss_dssp ECEEEEEEEEETTSSSEEEEEEETTTT-------EEEEEETTSS
T ss_pred CCCeEEEEEECCCccEEEEEEEECCCC-------EEEEeCCCCc
Confidence 357999999999999999999985422 2788999998
|
It forms a beta sandwich module [].; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 1W2T_C 1UYP_A 3UGG_A 3UGH_B 3UGF_B .... |
| >COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.11 E-value=8.6 Score=42.43 Aligned_cols=149 Identities=12% Similarity=0.082 Sum_probs=76.4
Q ss_pred CCCCCccCCcceEEECCEEEEEeeeCCCCC-CCCCcEEEEEEeCCCC--cceecCCCCCCCCCccCCCeEeeeEEEcCCC
Q 010428 53 PPKNWINDPNGVMIYKGIYHLFYQYNPKGA-VWGNIVWAHSTSKDLI--NWIPHDPAIYPSQQSDINGCWSGSATILPGE 129 (511)
Q Consensus 53 p~~gw~NDPnG~~~~~G~YHLFYQ~~P~~~-~~g~~~WgHa~S~DLv--hW~~~~~aL~P~~~~D~~g~~SGsav~~~dg 129 (511)
|-.|=+.-|+ +.|+||+|+|+|.--+... .|-+++-- .+|.+-+ .|.+. +..+.. +.+.+|.+.++||
T Consensus 86 ~~S~giWAPd-l~y~dGkfwl~ytdvk~~~g~~k~~~ny-l~t~~s~~G~WsDp--i~l~~~-----~~iDPslf~D~dG 156 (549)
T COG3507 86 PYSGGIWAPD-LSYHDGKFWLYYTDVKRSGGPYKNAGNY-LVTAESIDGPWSDP--IKLNGS-----NAIDPSLFFDKDG 156 (549)
T ss_pred CCCCceeccc-eecCCCcEEEEEecccccCCcccccccE-EEEecCCCCCcccc--eecCCc-----CccCCceeecCCC
Confidence 4455566674 7899999999995433322 22222222 3333332 46542 111211 2567888888999
Q ss_pred ceEEEEeccCCC--CcceEEEEEecCCCCcccceeeecCC--CceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeee
Q 010428 130 KPAIFYTGIDPH--NRQVQNLAVPKNLSDPYLREWVKSPK--NPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSK 205 (511)
Q Consensus 130 ~~~l~YTg~~~~--~~q~q~lA~s~d~~d~~l~~w~K~~~--nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~ 205 (511)
+.+|+|-+.+.. ....-.+-.+... .+=.|..+ -.++- .+.+..--.-|. +.+ ++|-|||+++-+
T Consensus 157 r~wlv~~~w~~~~~~~~~~~i~l~~~~-----~~~~~l~g~~~~~~~----~G~~~~~~EGPh-l~k-~~gYYYL~~a~g 225 (549)
T COG3507 157 RKWLVNGSWDGGIFMHSFAGIILQEYD-----KTTQKLVGQGYKIIF----DGGNGGLTEGPH-LYK-KTGYYYLYVAEG 225 (549)
T ss_pred CEEEEecccCCCcccccccceeeeecc-----ccccccCCccceeEe----ccCCCccccCce-eec-cCCEEEEEEEcC
Confidence 999999987642 1111111111110 00011111 11111 111122334675 566 788888887654
Q ss_pred c-CCcc-EEEEEEcCCCC
Q 010428 206 I-NRKG-LAILYRSKDFV 221 (511)
Q Consensus 206 ~-~~~G-~i~ly~S~Dl~ 221 (511)
. ...| .+.++||+.+.
T Consensus 226 G~t~~gh~~~vaRSKsid 243 (549)
T COG3507 226 GLTTYGHAIRVARSKSID 243 (549)
T ss_pred CCCccceeEEEEeccCCC
Confidence 3 3333 57899998864
|
|
| >PTZ00334 trans-sialidase; Provisional | Back alignment and domain information |
|---|
Probab=88.05 E-value=8.4 Score=44.53 Aligned_cols=152 Identities=16% Similarity=0.241 Sum_probs=84.3
Q ss_pred ccCCcceEEECCEEEEEeeeC--CC--------CCCCC-CcEEEEEEeC-----CCCcceecCCCCCCCC-C--ccC-CC
Q 010428 58 INDPNGVMIYKGIYHLFYQYN--PK--------GAVWG-NIVWAHSTSK-----DLINWIPHDPAIYPSQ-Q--SDI-NG 117 (511)
Q Consensus 58 ~NDPnG~~~~~G~YHLFYQ~~--P~--------~~~~g-~~~WgHa~S~-----DLvhW~~~~~aL~P~~-~--~D~-~g 117 (511)
.-.|--++.-+..|=|-=-|+ .. ...|+ ....|+++-. .-|+|.+. ..|.... . ... .+
T Consensus 179 v~rPTTvvKGn~VfmLvG~y~~~~~~~~~~~~~~~~~~l~Lv~G~Vt~~~~~~~k~I~W~~~-~~l~~~~~~~~~~~l~~ 257 (780)
T PTZ00334 179 VSRPTTVVNGSDIYMFAGTYSFEVTDKAGNTAAAAKWGLLVAVGNVSNDGSSGKKKIYWKDA-SVIPWTDFEKQHESLTR 257 (780)
T ss_pred ccCCeEEeeCCEEEEEecccccccccccccccccCCCccEEEEEEeecCCCCCcceEECcCc-ccCCcccccccccccee
Confidence 456766665555555552221 11 12344 4567888632 24999773 2331111 1 010 11
Q ss_pred eE--eeeEEEcCCCceEEEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCC
Q 010428 118 CW--SGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPD 195 (511)
Q Consensus 118 ~~--SGsav~~~dg~~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~ 195 (511)
.+ -||.|+.+||++++=-.+.+.++...-.|.+|+|.+ +|+=. .+......+||.|+-. ++
T Consensus 258 ~iggGGSGI~medGTLVFPv~a~~~~g~~vslIiYS~d~g-----~W~ls-----------~g~s~~gC~~P~I~EW-e~ 320 (780)
T PTZ00334 258 LIGGGGSGVQMKDGTLVFPVEGTKKDGKAVSLIIYSSATE-----SGNLS-----------KGMSADGCSDPSVVEW-KE 320 (780)
T ss_pred ecCCCcCeEEecCCeEEEEEEEEcCCCCEEEEEEEecCCC-----CeEEc-----------CCCCCCCCCCCEEEEE-cC
Confidence 11 155666789997765555544455556677888752 47532 1222345799997755 56
Q ss_pred CeEEEEEeeecCCccEEEEEEcCCC-CCcEEccccc
Q 010428 196 KRWRVIIGSKINRKGLAILYRSKDF-VHWIKAKHPL 230 (511)
Q Consensus 196 g~w~m~~ga~~~~~G~i~ly~S~Dl-~~W~~~~~~l 230 (511)
|+-.|+.... .|+=.+|+|.|. ..|+..-..|
T Consensus 321 gkLlM~t~C~---dG~RrVYES~DmG~tWtEAlGTL 353 (780)
T PTZ00334 321 GKLMMMTACD---DGRRRVYESGDKGDSWTEALGTL 353 (780)
T ss_pred CeEEEEEEeC---CCCEEEEEECCCCCChhhCCCcc
Confidence 7877766543 244479999886 6898654333
|
|
| >PF13810 DUF4185: Domain of unknown function (DUF4185) | Back alignment and domain information |
|---|
Probab=86.45 E-value=44 Score=34.67 Aligned_cols=152 Identities=15% Similarity=0.155 Sum_probs=84.0
Q ss_pred CCcceEEECCEEEEEeeeCCC-C---CCCCCcEEEEEEeCC-CCcceecCCCCCCCCCccCCCe------EeeeEEEcCC
Q 010428 60 DPNGVMIYKGIYHLFYQYNPK-G---AVWGNIVWAHSTSKD-LINWIPHDPAIYPSQQSDINGC------WSGSATILPG 128 (511)
Q Consensus 60 DPnG~~~~~G~YHLFYQ~~P~-~---~~~g~~~WgHa~S~D-LvhW~~~~~aL~P~~~~D~~g~------~SGsav~~~d 128 (511)
=|.+.|-.+|+-+|.|+..-. + ..|..-.=+.+.|+| ..+|+..+..+.+....- .|+ |.-++....|
T Consensus 96 iPt~~I~v~~~~Yl~~msv~~wg~~~G~W~tn~S~i~~S~D~G~tW~~~~~~~~~~~~~~-~g~~~~~~~fq~~a~~~~d 174 (316)
T PF13810_consen 96 IPTDGISVGGRQYLHYMSVRNWGNVPGSWTTNYSGIAYSDDNGETWTVVPGTIRPNSPFH-PGFNQGNWNFQMAAFVKDD 174 (316)
T ss_pred cccceEEECCcEEEEEEEEccCCCCCCccccCceEEEEeCCCCCCceeCCCccccccccc-CCccccccccccccccCCC
Confidence 388889999999999996521 1 123333447899999 689999986666654111 111 2223333345
Q ss_pred CceEEEEeccCCCCcceEEEEEe-cC-CCCcc------cce--eeecCC--CceecCCCCCcCCCCCCCCCEEEEeCCCC
Q 010428 129 EKPAIFYTGIDPHNRQVQNLAVP-KN-LSDPY------LRE--WVKSPK--NPLMAPDAMNQINTSSFRDPTTAWLGPDK 196 (511)
Q Consensus 129 g~~~l~YTg~~~~~~q~q~lA~s-~d-~~d~~------l~~--w~K~~~--nPVi~~p~~~~~~~~~fRDP~vvw~~~~g 196 (511)
|-.|+|=|...+ .....||.- .+ -.|+. ... |.+... .||+..+ +---.|.|.+..|
T Consensus 175 gyVYv~gt~~~R--~g~~~LaRV~~~~i~d~~ayeyw~g~~~~W~~~~~~atpv~~~~---------vgElSv~~~~~~g 243 (316)
T PF13810_consen 175 GYVYVYGTPFGR--NGGVYLARVPPDDILDRSAYEYWDGSGGGWSWGNPPATPVLPGP---------VGELSVRYNEYLG 243 (316)
T ss_pred CEEEEEeCCCCC--CCcEEEEEeCHHHCCChhhccccCCCCcccccCCCCccccccCC---------ccceEEEEeCCCC
Confidence 655555554432 222333322 11 11100 012 543211 3555332 1223466766689
Q ss_pred eEEEEEeeecCCccEEEEEEcCCCC-CcEE
Q 010428 197 RWRVIIGSKINRKGLAILYRSKDFV-HWIK 225 (511)
Q Consensus 197 ~w~m~~ga~~~~~G~i~ly~S~Dl~-~W~~ 225 (511)
+|+|+.... ..+.|.+.++++.. .|..
T Consensus 244 k~Vl~~~~~--~~~~I~~RtA~~P~GpWs~ 271 (316)
T PF13810_consen 244 KWVLSYFDA--GTGGIVLRTAPSPTGPWSE 271 (316)
T ss_pred EEEEEEecc--cCCcEEEEecCCCCCCCCC
Confidence 999988643 33568888888887 5863
|
|
| >COG3940 Predicted beta-xylosidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=81.18 E-value=9.6 Score=37.15 Aligned_cols=102 Identities=25% Similarity=0.438 Sum_probs=61.6
Q ss_pred eEEECC-EEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceec--CCCC-CCCCCccCCCeE--eeeEEEcCCCceEEEEec
Q 010428 64 VMIYKG-IYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPH--DPAI-YPSQQSDINGCW--SGSATILPGEKPAIFYTG 137 (511)
Q Consensus 64 ~~~~~G-~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~--~~aL-~P~~~~D~~g~~--SGsav~~~dg~~~l~YTg 137 (511)
.++++| .|+++-|-.|.-. |+..+..|.-.+ -|+-. ++.| .|.-+|+..|.| .|.||+.++|++.+-|.+
T Consensus 137 tfeh~gk~yyvwaqkdp~i~--gnsniyiaemen--pwtikgepvmlskpe~dwe~~gfwvnegpav~k~ngkifi~ysa 212 (324)
T COG3940 137 TFEHNGKLYYVWAQKDPNIK--GNSNIYIAEMEN--PWTIKGEPVMLSKPELDWEIKGFWVNEGPAVLKKNGKIFITYSA 212 (324)
T ss_pred eeeeCCEEEEEEeccCCCcc--CCcceEEEeccC--CceecCceEEecCCCcccEEEEEEecCCceEEEECCEEEEEEec
Confidence 345655 5788888887644 444454554333 46655 3434 344567777877 488888889999999987
Q ss_pred cCCCCcceEEEEEec---CCCCcccceeeecCCCceec
Q 010428 138 IDPHNRQVQNLAVPK---NLSDPYLREWVKSPKNPLMA 172 (511)
Q Consensus 138 ~~~~~~q~q~lA~s~---d~~d~~l~~w~K~~~nPVi~ 172 (511)
...+..-..++-+.. |.-|| .+|+|.+ .||+.
T Consensus 213 satd~nycmgllwanen~dlldp--aswtksp-tpvf~ 247 (324)
T COG3940 213 SATDVNYCMGLLWANENSDLLDP--ASWTKSP-TPVFK 247 (324)
T ss_pred cccccceeeeeeeecccCCcCCc--hhcccCC-Cccee
Confidence 643322223333332 22233 5899974 78884
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 511 | ||||
| 2ac1_A | 541 | Crystal Structure Of A Cell-Wall Invertase From Ara | 0.0 | ||
| 2xqr_A | 537 | Crystal Structure Of Plant Cell Wall Invertase In C | 0.0 | ||
| 2oxb_A | 537 | Crystal Structure Of A Cell-Wall Invertase (E203q) | 0.0 | ||
| 2qqv_A | 537 | Crystal Structure Of A Cell-Wall Invertase (E203a) | 0.0 | ||
| 2qqw_A | 537 | Crystal Structure Of A Cell-Wall Invertase (D23a) F | 0.0 | ||
| 2qqu_A | 535 | Crystal Structure Of A Cell-Wall Invertase (D239a) | 0.0 | ||
| 1st8_A | 543 | Crystal Structure Of Fructan 1-Exohydrolase Iia Fro | 1e-150 | ||
| 2aez_A | 543 | Crystal Structure Of Fructan 1-Exohydrolase Iia (E2 | 1e-150 | ||
| 3ugf_A | 546 | Crystal Structure Of A 6-Sst6-Sft From Pachysandra | 1e-100 | ||
| 1uyp_A | 432 | The Three-Dimensional Structure Of Beta-Fructosidas | 2e-35 | ||
| 1w2t_A | 432 | Beta-Fructosidase From Thermotoga Maritima In Compl | 7e-35 | ||
| 3pig_A | 526 | Beta-Fructofuranosidase From Bifidobacterium Longum | 2e-29 | ||
| 1y9m_A | 518 | Crystal Structure Of Exo-Inulinase From Aspergillus | 1e-24 | ||
| 3sc7_X | 516 | First Crystal Structure Of An Endo-Inulinase, From | 3e-21 | ||
| 3kf5_A | 512 | Structure Of Invertase From Schwanniomyces Occident | 3e-19 | ||
| 3kf3_A | 509 | Structure Of Fructofuranosidase From Schwanniomyces | 3e-19 | ||
| 3u75_A | 535 | Structure Of E230a-Fructofuranosidase From Schwanni | 1e-18 | ||
| 3u14_A | 535 | Structure Of D50a-Fructofuranosidase From Schwannio | 2e-18 | ||
| 4fff_A | 490 | Crystal Structure Of Levan Fructotransferase From A | 1e-10 | ||
| 4ffg_A | 492 | Crystal Structure Of Levan Fructotransferase From A | 1e-10 | ||
| 4ffh_A | 492 | Crystal Structure Of Levan Fructotransferase D54n M | 5e-10 |
| >pdb|2AC1|A Chain A, Crystal Structure Of A Cell-Wall Invertase From Arabidopsis Thaliana Length = 541 | Back alignment and structure |
|
| >pdb|2XQR|A Chain A, Crystal Structure Of Plant Cell Wall Invertase In Complex With A Specific Protein Inhibitor Length = 537 | Back alignment and structure |
|
| >pdb|2OXB|A Chain A, Crystal Structure Of A Cell-Wall Invertase (E203q) From Arabidopsis Thaliana In Complex With Sucrose Length = 537 | Back alignment and structure |
|
| >pdb|2QQV|A Chain A, Crystal Structure Of A Cell-Wall Invertase (E203a) From Arabidopsis Thaliana In Complex With Sucrose Length = 537 | Back alignment and structure |
|
| >pdb|2QQW|A Chain A, Crystal Structure Of A Cell-Wall Invertase (D23a) From Arabidopsis Thaliana In Complex With Sucrose Length = 537 | Back alignment and structure |
|
| >pdb|2QQU|A Chain A, Crystal Structure Of A Cell-Wall Invertase (D239a) From Arabidopsis Thaliana In Complex With Sucrose Length = 535 | Back alignment and structure |
|
| >pdb|1ST8|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia From Cichorium Intybus Length = 543 | Back alignment and structure |
|
| >pdb|2AEZ|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia (E201q) From Cichorium Intybus In Complex With 1-Kestose Length = 543 | Back alignment and structure |
|
| >pdb|3UGF|A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra Terminalis Length = 546 | Back alignment and structure |
|
| >pdb|1UYP|A Chain A, The Three-Dimensional Structure Of Beta-Fructosidase (Invertase) From Thermotoga Maritima Length = 432 | Back alignment and structure |
|
| >pdb|1W2T|A Chain A, Beta-Fructosidase From Thermotoga Maritima In Complex With Raffinose Length = 432 | Back alignment and structure |
|
| >pdb|3PIG|A Chain A, Beta-Fructofuranosidase From Bifidobacterium Longum Length = 526 | Back alignment and structure |
|
| >pdb|1Y9M|A Chain A, Crystal Structure Of Exo-Inulinase From Aspergillus Awamori In Spacegroup P212121 Length = 518 | Back alignment and structure |
|
| >pdb|3SC7|X Chain X, First Crystal Structure Of An Endo-Inulinase, From Aspergillus Ficuum: Structural Analysis And Comparison With Other Gh32 Enzymes. Length = 516 | Back alignment and structure |
|
| >pdb|3KF5|A Chain A, Structure Of Invertase From Schwanniomyces Occidentalis Length = 512 | Back alignment and structure |
|
| >pdb|3KF3|A Chain A, Structure Of Fructofuranosidase From Schwanniomyces Occidentalis Complexed With Fructose Length = 509 | Back alignment and structure |
|
| >pdb|3U75|A Chain A, Structure Of E230a-Fructofuranosidase From Schwanniomyces Occidentalis Complexed With Fructosylnystose Length = 535 | Back alignment and structure |
|
| >pdb|3U14|A Chain A, Structure Of D50a-Fructofuranosidase From Schwanniomyces Occidentalis Complexed With Inulin Length = 535 | Back alignment and structure |
|
| >pdb|4FFF|A Chain A, Crystal Structure Of Levan Fructotransferase From Arthrobacter Ureafaciens Length = 490 | Back alignment and structure |
|
| >pdb|4FFG|A Chain A, Crystal Structure Of Levan Fructotransferase From Arthrobacter Ureafaciens In Complex With Dfa-Iv Length = 492 | Back alignment and structure |
|
| >pdb|4FFH|A Chain A, Crystal Structure Of Levan Fructotransferase D54n Mutant From Arthrobacter Ureafaciens In Complex With Sucrose Length = 492 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 511 | |||
| 1st8_A | 543 | Fructan 1-exohydrolase IIA; five fold beta propell | 0.0 | |
| 2ac1_A | 541 | Invertase; five fold beta propeller, hydrolase; HE | 0.0 | |
| 3ugf_A | 546 | Sucrose:(sucrose/fructan) 6-fructosyltransferase; | 0.0 | |
| 1y4w_A | 518 | EXO-inulinase; glycoside hydrolase FAMI crystallog | 1e-172 | |
| 3pij_A | 526 | Beta-fructofuranosidase; five-bladed beta-propelle | 1e-151 | |
| 3sc7_X | 516 | Inulinase; glycoside hydrolase family 32, glycosyl | 1e-148 | |
| 1w2t_A | 432 | Beta fructosidase; hydrolase, glycosidase, inverta | 1e-139 | |
| 3kf3_A | 509 | Invertase; GH32, glycoprotein, glycosidase, hydrol | 1e-138 | |
| 4ffh_A | 492 | Levan fructotransferase; glycoside hydrolase; HET: | 1e-132 | |
| 3lig_A | 634 | Fructosyltransferase; five bladed beta-propeller f | 1e-110 | |
| 3p2n_A | 408 | 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-p | 9e-10 | |
| 3qc2_A | 364 | Glycosyl hydrolase; 5-bladed beta propeller fold, | 3e-09 | |
| 3r4z_A | 374 | Glycosyl hydrolase family 32, N terminal; AGAR met | 6e-09 | |
| 4ak5_A | 404 | Anhydro-alpha-L-galactosidase; hydrolase, marine g | 2e-08 | |
| 3taw_A | 356 | Hypothetical glycoside hydrolase; 5-bladed beta-pr | 1e-07 | |
| 2yfr_A | 571 | Levansucrase, inulosucrase; fructosyltransferase, | 2e-07 | |
| 1oyg_A | 447 | Levansucrase; glycoside hydrolase, beta-propeller, | 2e-05 | |
| 1vkd_A | 338 | Conserved hypothetical protein TM1225; structural | 2e-05 | |
| 1vkd_A | 338 | Conserved hypothetical protein TM1225; structural | 3e-04 |
| >1st8_A Fructan 1-exohydrolase IIA; five fold beta propeller; HET: NDG NAG MAN; 2.35A {Cichorium intybus} PDB: 2add_A* 2ade_A* 2aey_A* 2aez_A* Length = 543 | Back alignment and structure |
|---|
Score = 635 bits (1639), Expect = 0.0
Identities = 258/447 (57%), Positives = 333/447 (74%), Gaps = 7/447 (1%)
Query: 42 NQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGN-IVWAHSTSKDLINW 100
QPYRTGYHFQPP NW+NDPNG M+Y+G+YH FYQYNP A +G+ I+W H+ S DL+NW
Sbjct: 4 EQPYRTGYHFQPPSNWMNDPNGPMLYQGVYHFFYQYNPYAATFGDVIIWGHAVSYDLVNW 63
Query: 101 IPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLR 160
I DPAIYP+Q++D CWSGSATILPG PA+ YTG D +RQVQ+LA PKNLSDP+LR
Sbjct: 64 IHLDPAIYPTQEADSKSCWSGSATILPGNIPAMLYTGSDSKSRQVQDLAWPKNLSDPFLR 123
Query: 161 EWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDF 220
EWVK PKNPL+ P + FRDP+TAWLGPD WR+++G + G+A LY+S DF
Sbjct: 124 EWVKHPKNPLITPP--EGVKDDCFRDPSTAWLGPDGVWRIVVGGDRDNNGMAFLYQSTDF 181
Query: 221 VHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYY 280
V+W + PL S TG WECPDF+PV NGLDTS G + +HV+K + H++Y
Sbjct: 182 VNWKRYDQPLSSADATGTWECPDFYPVPLNSTNGLDTSVYGGSVRHVMKAGFEG--HDWY 239
Query: 281 TVGTYSTAKDRYVPDEGSVESDS--GLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSV 338
T+GTYS ++ ++P G + S LR+DYG++YASK+FFD AKNRRVLW WV E+ S
Sbjct: 240 TIGTYSPDRENFLPQNGLSLTGSTLDLRYDYGQFYASKSFFDDAKNRRVLWAWVPETDSQ 299
Query: 339 NDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTG 398
DD++KGWAG+Q+ PR LW+D++GK L+QWPV EIE+LR NQV + +K LK GSV+E+ G
Sbjct: 300 ADDIEKGWAGLQSFPRALWIDRNGKQLIQWPVEEIEELRQNQVNLQNKNLKPGSVLEIHG 359
Query: 399 VTAAQADVEISFDVSDFKKAEKLDPGWTNPQLLCSQKGASVKGALGPFGLLALASKDLKE 458
+ A+QADV ISF + K+AE LD +PQ LC+++GAS +GALGPFGLLA+ASKDLKE
Sbjct: 360 IAASQADVTISFKLEGLKEAEVLDTTLVDPQALCNERGASSRGALGPFGLLAMASKDLKE 419
Query: 459 YTAVFFRIFKGEDNKFVVLMCSDQSRS 485
+A+FFR+F+ + ++ VLMCSD SRS
Sbjct: 420 QSAIFFRVFQNQLGRYSVLMCSDLSRS 446
|
| >2ac1_A Invertase; five fold beta propeller, hydrolase; HET: NAG MAN; 2.15A {Arabidopsis thaliana} PDB: 2xqr_A* 2oxb_A* 2qqw_A* 2qqv_A* 2qqu_A* Length = 541 | Back alignment and structure |
|---|
Score = 635 bits (1639), Expect = 0.0
Identities = 323/454 (71%), Positives = 374/454 (82%), Gaps = 6/454 (1%)
Query: 38 STSPNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDL 97
S S NQPYRTG+HFQPPKNW+NDPNG MIYKGIYHLFYQ+NPKGAVWGNIVWAHSTS DL
Sbjct: 1 SPSVNQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDL 60
Query: 98 INWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDP 157
INW PH PAI+PS DINGCWSGSATILP KP I YTGIDP N+QVQN+A PKNLSDP
Sbjct: 61 INWDPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDP 120
Query: 158 YLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRS 217
YLREW KSP NPLMAPDA+N IN SSFRDPTTAWLG DK+WRVIIGSKI+R+GLAI Y S
Sbjct: 121 YLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTS 180
Query: 218 KDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPN---TKHVLKVSLDD 274
KDF+ W K+ PLH G+GMWECPDFFPV+ +G NG++TS G KHVLK+SLDD
Sbjct: 181 KDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDD 240
Query: 275 TKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNE 334
TKH+YYT+GTY KD++VPD G + R+DYGKYYASKTFFD AKNRR+LWGW NE
Sbjct: 241 TKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNE 300
Query: 335 SSSVNDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLRVNQVQ-VPSKLLKGGSV 393
SSSV DDV+KGW+GIQ IPRK+WLD+SGK L+QWPV E+E+LR QV+ + +K+LK GS
Sbjct: 301 SSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSR 360
Query: 394 IEVTGVTAAQADVEISFDVSDFKKAEKLDPGWTNPQLLCSQKGASVKGALGPFGLLALAS 453
+EV GVTAAQADVE+ F V D +KA+ ++P WT+PQL+CS+ SVK LGPFGL+ LAS
Sbjct: 361 LEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLAS 420
Query: 454 KDLKEYTAVFFRIFKGED--NKFVVLMCSDQSRS 485
K+L+EYT+V+FRIFK NK+VVLMCSDQSRS
Sbjct: 421 KNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRS 454
|
| >3ugf_A Sucrose:(sucrose/fructan) 6-fructosyltransferase; glycoside hydrolase family 32; HET: NAG FUC BMA MAN; 1.70A {Pachysandra terminalis} PDB: 3ugg_A* 3ugh_A* Length = 546 | Back alignment and structure |
|---|
Score = 604 bits (1560), Expect = 0.0
Identities = 189/449 (42%), Positives = 270/449 (60%), Gaps = 5/449 (1%)
Query: 38 STSPNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDL 97
S + RT +HFQP ++W++DP+G + YKG YH FYQYNP VWGN W H+ S+DL
Sbjct: 11 SNAQLSWQRTAFHFQPERSWMSDPDGPIFYKGWYHFFYQYNPDNPVWGNNTWGHTVSRDL 70
Query: 98 INWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDP 157
I+W+ A+ Q D+ G +SGSAT LP + + YTG+ ++ +LA P +LSDP
Sbjct: 71 IHWLYLPLALAADQWYDMQGVFSGSATCLPDGRIMMLYTGVTKEMVEMLSLAYPADLSDP 130
Query: 158 YLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRS 217
L EWVK P NP+++ ++ + FRD +T W + WR+ IG+K N G+A++Y +
Sbjct: 131 LLVEWVKYPGNPILSAPP--GVSPTEFRDASTGWYVSNGTWRIAIGAKYNTTGIAMVYET 188
Query: 218 KDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKH 277
KDF + + LH+V TG+WEC D +PVST G GL+TS GP KHVLK S+D+ +
Sbjct: 189 KDFKSFKLLEELLHAVPDTGLWECVDLYPVSTTGEKGLETSVNGPKVKHVLKASIDEQQR 248
Query: 278 EYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSS 337
+YY +GTY +++ PD + GLR+D+GKYYASKTF+D K RRV+W W E S
Sbjct: 249 DYYAIGTYDLGTNKWTPDNPEEDVGIGLRYDWGKYYASKTFYDPKKQRRVVWAWTKELDS 308
Query: 338 VNDDVKKGWAGIQAIPRKLWLD-KSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEV 396
D +KGWA +Q IPR + LD K+G +++ WPV E+E LR++ + GSV+ +
Sbjct: 309 EVADREKGWANVQTIPRTVLLDQKTGTNVLLWPVEEVESLRLSSKEFSKVKAGAGSVVPL 368
Query: 397 TGVTAAQADVEISFDVSDFKKAEKLDPGWTNPQLLCSQKGASVKGALGPFGLLALASKDL 456
TA Q D+ F++ ++ + GA+ +G LGPFGLL A+++L
Sbjct: 369 DVGTATQLDIIAEFEIDKEALEGTIEADMG--YNCTTSGGAAERGVLGPFGLLVSATENL 426
Query: 457 KEYTAVFFRIFKGEDNKFVVLMCSDQSRS 485
E T V+F I KG D F C D+SRS
Sbjct: 427 SEQTPVYFYIAKGTDGNFKTFFCLDESRS 455
|
| >1y4w_A EXO-inulinase; glycoside hydrolase FAMI crystallographic structure, native structure, hydrolase; HET: NAG; 1.55A {Aspergillus awamori} SCOP: b.29.1.19 b.67.2.3 PDB: 1y9g_A* 1y9m_A* Length = 518 | Back alignment and structure |
|---|
Score = 493 bits (1272), Expect = e-172
Identities = 111/479 (23%), Positives = 162/479 (33%), Gaps = 80/479 (16%)
Query: 42 NQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWI 101
+QPYR YHF P KNW+NDPNG++ + G YHLF+QYNP G WGNI W H+ S+DL +W
Sbjct: 4 DQPYRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDLTHWE 63
Query: 102 PHDPAIYPSQQSD--INGCWSGSATILPGEKPA----------IFYTGIDP--------- 140
A+ +SGSA YT P
Sbjct: 64 EKPVALLARGFGSDVTEMYFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQ 123
Query: 141 ---HNRQVQNLAVPKNLSDPYLREWVKSPKNPLM-APDAMNQINTSSFRDPTTAWLGPDK 196
++Q Q++A D L NP++ P + + +FRDP W +
Sbjct: 124 TVQEDQQSQSIAYS---LDDGLTWTTYDAANPVIPNPPSPYEAEYQNFRDPFVFWHDESQ 180
Query: 197 RWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLD 256
+W V+ I +Y S + W G+WECP +
Sbjct: 181 KWVVVTS--IAELHKLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPLDS----- 233
Query: 257 TSDMGPNTKHVLKVSLDD-------TKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDY 309
G +TK V+ L+ Y VG + D + + D+
Sbjct: 234 ----GNSTKWVITSGLNPGGPPGTVGSGTQYFVGEFDGTTFTPDADTVYPGNSTANWMDW 289
Query: 310 GK-YYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSGK--HLV 366
G +YA+ + + N V GW+N + W AIPR + L G LV
Sbjct: 290 GPDFYAAAGYNGLSLNDHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLV 349
Query: 367 QWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQADVEISFDVSDFKKAEKLDPGWT 426
Q P + + T T V++SF
Sbjct: 350 QQPQEAWSSISNKRPIYSRTFKTLSEGSTNTTTTGETFKVDLSFS--------------- 394
Query: 427 NPQLLCSQKGASVKGALGPFGLLALASKDLKEYTAVFFRIFKGEDNKFVVLMCSDQSRS 485
K F + AS + E T V + K + + L +
Sbjct: 395 ------------AKSKASTFAIALRASANFTEQTLVGYDFAKQQ----IFLDRTHSGDV 437
|
| >3pij_A Beta-fructofuranosidase; five-bladed beta-propeller and beta-sandwich domains, glycos hydrolase family 32, probiotic bacteria, fructose; HET: FRU; 1.80A {Bifidobacterium longum} PDB: 3pig_A* Length = 526 | Back alignment and structure |
|---|
Score = 442 bits (1138), Expect = e-151
Identities = 111/460 (24%), Positives = 177/460 (38%), Gaps = 67/460 (14%)
Query: 31 RNLQTSQSTSPNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWA 90
+ N + YH WINDPNG+ YKG +H+FYQ +P G WG + W
Sbjct: 25 EAGVAEMAAKRNNRWYPKYHIASNGGWINDPNGLCFYKGRWHVFYQLHPYGTQWGPMHWG 84
Query: 91 HSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHN-------- 142
H +S D++NW PS + + +G +SGSA I +YTG N
Sbjct: 85 HVSSTDMLNWKREPIMFAPSLEQEKDGVFSGSAVIDDNGDLRFYYTGHRWANGHDNTGGD 144
Query: 143 RQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVII 202
QVQ A+P N + + ++ +RDP W +
Sbjct: 145 WQVQMTALPDN-----DELTSATKQGMIIDCPT--DKVDHHYRDPKVWK--TGDTWYMTF 195
Query: 203 GSK-INRKGLAILYRSKDFVHWIKAKHPL-HSVKGTGMWECPDFFPVSTYGLNG---LDT 257
G +++G L+ SKD V W + H M ECPDF P+ N +
Sbjct: 196 GVSSADKRGQMWLFSSKDMVRWEYERVLFQHPDPDVFMLECPDFSPIKDKDGNEKWVIGF 255
Query: 258 SDMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASK 316
S MG + ++ + Y +GT+ + P+ +D G YYA +
Sbjct: 256 SAMGSKPSGFMNRNVSNA---GYMIGTWEP-GGEFKPE------TEFRLWDCGHNYYAPQ 305
Query: 317 TFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKL 376
+F R++++GW++ GW G +PR++ L G +V PV E+E L
Sbjct: 306 SFNV--DGRQIVYGWMSPFVQPIPMEDDGWCGQLTLPREITLGDDGD-VVTAPVAEMEGL 362
Query: 377 RVNQVQVPSKLLKGGSVIEVTGVTAAQADVEISFDVSDFKKAEKLDPGWTNPQLLCSQKG 436
R + + S L ++ A ++E++ D++
Sbjct: 363 REDTLDHGSVTLDMDGE-QIIADDAEAVEIEMTIDLA----------------------- 398
Query: 437 ASVKGALGPFGLLALASKDLKEYTAVFFRIFKGEDNKFVV 476
GL A++D YT V + G+ + VV
Sbjct: 399 ---ASTAERAGLKIHATED-GAYTYVAYD---GQIGRVVV 431
|
| >3sc7_X Inulinase; glycoside hydrolase family 32, glycosylation cytosol, hydrolase; HET: MAN NAG EPE; 1.50A {Aspergillus ficuum} Length = 516 | Back alignment and structure |
|---|
Score = 434 bits (1117), Expect = e-148
Identities = 94/497 (18%), Positives = 174/497 (35%), Gaps = 94/497 (18%)
Query: 20 VVELQASHHVY--RNLQTSQSTSPNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQY 77
++ + ++ V+ T S + + YR YHF P + W+N+PNG++ +HLF+Q+
Sbjct: 1 MLNPKVAYMVWMTCLGLTLPSQAQSNDYRPSYHFTPDQYWMNEPNGLIKIGSTWHLFFQH 60
Query: 78 NPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPA----- 132
NP VWGNI W H+TS DL++W AI + ++G+A P
Sbjct: 61 NPTANVWGNICWGHATSTDLMHWAHKPTAIADENGVE---AFTGTAYYDPNNTSGLGDSA 117
Query: 133 -----IFYTG-IDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDA---MNQINTSS 183
++TG Q Q LA + W K NP+++ +
Sbjct: 118 NPPYLAWFTGYTTSSQTQDQRLAFSVDNG----ATWTKFQGNPIISTSQEAPHDITGGLE 173
Query: 184 FRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHW-----IKAKHPLHSVKGTGM 238
RDP + W +++ + + S D ++W +K+
Sbjct: 174 SRDPKVFFHRQSGNWIMVLAHG--GQDKLSFWTSADTINWTWQSDLKSTSINGLSSDITG 231
Query: 239 WECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSL-----DDTKHEYYTVGTYSTAKDRYV 293
WE PD F + G T V+ ++ G++
Sbjct: 232 WEVPDMFELPVEGTEE---------TTWVVMMTPAEGSPAGGNGVLAITGSFDGKSFTAD 282
Query: 294 PDEGSVESDSGLRFDYGK-YYASKTFFD--GAKNRRVLWGWVNESSSVNDDVKKGWAGIQ 350
P + S + D G+ + + ++ + + RR++ +N S W G+
Sbjct: 283 PVDAST-----MWLDNGRDFDGALSWVNVPASDGRRIIAAVMNSYGSNPPT--TTWKGML 335
Query: 351 AIPRKLWLDKSGK--HLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQADVEI 408
+ PR L L K G H VQ P+ E++ + + + ++ + G + ++ + DV +
Sbjct: 336 SFPRTLSLKKVGTQQHFVQQPITELDTISTSLQILANQTITPGQTL-LSSIRGTALDVRV 394
Query: 409 SFDVSDFKKAEKLDPGWTNPQLLCSQKGASVKGALGPFGLLALASKDLKEYTAVFFRIFK 468
+F L E T + +
Sbjct: 395 AFYPDA----------------------------GSVLSLAVRKGAS--EQTVIKYTQSD 424
Query: 469 GEDNKFVVLMCSDQSRS 485
+ D++ S
Sbjct: 425 AT-------LSVDRTES 434
|
| >1w2t_A Beta fructosidase; hydrolase, glycosidase, invertase, raffinose; HET: SUC GLA CIT; 1.87A {Thermotoga maritima} SCOP: b.29.1.19 b.67.2.3 PDB: 1uyp_A* Length = 432 | Back alignment and structure |
|---|
Score = 408 bits (1051), Expect = e-139
Identities = 103/378 (27%), Positives = 175/378 (46%), Gaps = 55/378 (14%)
Query: 45 YRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHD 104
++ YHF P W+NDPNG++ +KG YH+FYQYNP+ WGNI W H+ S DL++W
Sbjct: 2 FKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLP 61
Query: 105 PAIYPSQQSDINGCWSGSATILPGEKPAIFYTGI-----DPHNRQVQNLAVPKNLSDPYL 159
A+YP + +G +SGSA + K + YT + ++ Q + + +N
Sbjct: 62 VALYPDD--ETHGVFSGSA-VEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSEN-----G 113
Query: 160 REWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-NRKGLAILYRSK 218
++VK NP+++ + T +FRDP + WR+++GS + G +LY S
Sbjct: 114 LDFVKYDGNPVISKPP--EEGTHAFRDPKVNR--SNGEWRMVLGSGKDEKIGRVLLYTSD 169
Query: 219 DFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHE 278
D HW K + + + T +CPD + K +L S+ T
Sbjct: 170 DLFHW-KYEGAIFEDETTKEIDCPDLVRI---------------GEKDILIYSITSTNSV 213
Query: 279 YYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNE--S 335
+++G EG + + D+G +YA++TFF +R V+ GW+
Sbjct: 214 LFSMGEL---------KEGKLNVEKRGLLDHGTDFYAAQTFFG--TDRVVVIGWLQSWLR 262
Query: 336 SSVNDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIE 395
+ + ++GW G+ ++PR+L+++ L PV E+ LR +V +K S
Sbjct: 263 TGLYPTKREGWNGVMSLPRELYVE--NNELKVKPVDELLALRKRKVFETAK-----SGTF 315
Query: 396 VTGVTAAQADVEISFDVS 413
+ V ++ F
Sbjct: 316 LLDVKENSYEIVCEFSGE 333
|
| >3kf3_A Invertase; GH32, glycoprotein, glycosidase, hydrolase; HET: FRU NAG; 1.90A {Schwanniomyces occidentalis} PDB: 3kf5_A* 3u75_A* 3u14_A* Length = 509 | Back alignment and structure |
|---|
Score = 406 bits (1045), Expect = e-138
Identities = 98/487 (20%), Positives = 183/487 (37%), Gaps = 71/487 (14%)
Query: 38 STSPNQPYRTGYHFQPPKNWINDPNGVMIYK--GIYHLFYQYNPKGAVWGN-IVWAHSTS 94
S ++ R HF P K W+NDPNG+ K ++HL++QYNP WG + W H+TS
Sbjct: 2 SVDTSEYNRPLIHFTPEKGWMNDPNGLFYDKTAKLWHLYFQYNPNATAWGQPLYWGHATS 61
Query: 95 KDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHN------------ 142
DL++W H+ AI P D G +SGS + F + IDP+
Sbjct: 62 NDLVHWDEHEIAIGPEH--DNEGIFSGSIVVDHNNTSGFFNSSIDPNQRIVAIYTNNIPD 119
Query: 143 RQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVII 202
Q Q++A + + K NP++ ++++ FRDP W +W +++
Sbjct: 120 NQTQDIAFSLDGG----YTFTKYENNPVI------DVSSNQFRDPKVFWHEDSNQWIMVV 169
Query: 203 GSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGP 262
++ ++ S + +W+ + G +ECP V +
Sbjct: 170 SKS--QEYKIQIFGSANLKNWVLNSNFSSGYYG-NQYECPGLIEVPIENSDK-------- 218
Query: 263 NTKHVLKVSL-----DDTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASK 316
+K V+ +++ Y VG + ++VPD+ D GK +YA +
Sbjct: 219 -SKWVMFLAINPGSPLGGSINQYFVGDFD--GFQFVPDDSQ-----TRFVDIGKDFYAFQ 270
Query: 317 TFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWL-------DKSGKHLVQWP 369
TF + ++ + W + + W ++ R L + L+Q P
Sbjct: 271 TFSE-VEHGVLGLAWASNWQYADQVPTNPWRSSTSLARNYTLRYVHTNAETKQLTLIQNP 329
Query: 370 VVEIEKLRVNQVQVPSKLLKGGSVIEVT-GVTAAQADVEISFDVSDFKKAEKLDPGWTNP 428
V+ V++++ + L I+ + D I+F V + + PG T+
Sbjct: 330 VLPDSINVVDKLKKKNVKLTNKKPIKTNFKGSTGLFDFNITFKVLN----LNVSPGKTHF 385
Query: 429 QLLCSQKGASVKGALGPFGLLALASKDLKEYTAVFFRIFKGEDNKFVVLMCSDQSRSLQF 488
+L + + + G D + + R + + L+
Sbjct: 386 DILINSQELNSSVDSIKIGF------DSSQSSFYIDRHIPNVEFPRKQFFTDKLAAYLEP 439
Query: 489 FSFNISS 495
++
Sbjct: 440 LDYDQDL 446
|
| >4ffh_A Levan fructotransferase; glycoside hydrolase; HET: SUC; 2.20A {Arthrobacter ureafaciens} PDB: 4ffi_A* 4ffg_A* 4fff_A Length = 492 | Back alignment and structure |
|---|
Score = 391 bits (1007), Expect = e-132
Identities = 87/463 (18%), Positives = 150/463 (32%), Gaps = 92/463 (19%)
Query: 49 YHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIY 108
YH PP W+ +P + G Y L+Y ++ + G W H+++ D + + H +
Sbjct: 4 YHMTPPSGWLCNPQRPVTTHGAYQLYYLHSDQN--NGPGGWDHASTTDGVAFTHHGTVMP 61
Query: 109 PSQQSDINGCWSGSATILPGEKPAIFYTGI----------DPHNRQVQNLAVPKNLSDPY 158
WSGSA + A F G Q Q L +
Sbjct: 62 LRPDFP---VWSGSAVVDTA-NTAGFGAGAVVALATQPTDGVRKYQEQYLYWSTDG---- 113
Query: 159 LREWVKSPKNPLMAPDAM------NQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLA 212
+ P ++ D N FRDP W W +IG A
Sbjct: 114 GFTFTALPDPVIVNTDGRAATTPAEIENAEWFRDPKIHWDTARGEWVCVIGRL----RYA 169
Query: 213 ILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSL 272
Y S + W ++ + G ECPD F ++ VL S+
Sbjct: 170 AFYTSPNLRDWTLRRNFDYPNHALGGIECPDLFEIT----------ADDGTRHWVLAASM 219
Query: 273 DDTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTF--FDGAKNRRVLW 329
D Y T + ++ + + D+G +YA+ T+ D + +R+
Sbjct: 220 DAYGIGLPMTYAYWT--GTWDGEQFHADDLTPQWLDWGWDWYAAVTWPSIDAPETKRLAI 277
Query: 330 GWVNESSSVNDDV----KKGWAGIQAIPRKLWLDK---SGKHLVQWPVVEIEKLRVNQVQ 382
W+N DV G+ G +I R+L L + L+ PV +
Sbjct: 278 AWMNNWKYAARDVPTDASDGYNGQNSIVRELRLARQPGGWYTLLSTPVAALTNYVTATTT 337
Query: 383 VPSKLLKGGSVIEVTGVTAAQADVEISFDVSDFKKAEKLDPGWTNPQLLCSQKGASVKGA 442
+P + + G +V+ G A + +++I++D +
Sbjct: 338 LPDRTVDGSAVLPWNG-RAYEIELDIAWDTAT---------------------------- 368
Query: 443 LGPFGLLALASKDLKEYTAVFFRIFKGEDNKFVVLMCSDQSRS 485
G+ S D +T + K+ + D+ S
Sbjct: 369 --NVGISVGRSPDGTRHTNI---------GKYGADLYVDRGPS 400
|
| >3lig_A Fructosyltransferase; five bladed beta-propeller fold, hydrolase; 1.80A {Aspergillus japonicus} PDB: 3ldk_A* 3lem_A* 3ldr_A 3lih_A* 3lf7_A 3lfi_A* Length = 634 | Back alignment and structure |
|---|
Score = 339 bits (869), Expect = e-110
Identities = 87/575 (15%), Positives = 165/575 (28%), Gaps = 128/575 (22%)
Query: 32 NLQTSQSTSPNQPYRTGYHFQPPKNWINDPNGVM--IYKGIYHLFYQYNPKGAVWGNIVW 89
NL T + + +R H P + I DP G++H+ + ++ G
Sbjct: 13 NLSTLPNNTLFHLWRPRAHILPAEGQIGDPCAHYTDPSTGLFHVGFLHDGDG-------I 65
Query: 90 AHSTSKDLINWIPHD----PAIYPSQQSDINGCWSGSAT-ILPGEKPAIFYTGI------ 138
A +T+ +L + I P ++D + G+ + P + YT +
Sbjct: 66 AGATTANLATYTDTSDNGSFLIQPGGKNDPVAVFDGAVIPVGVNNTPTLLYTSVSFLPIH 125
Query: 139 ----DPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDP------- 187
+ Q+LAV + R + K + P++ D ++ ++FR P
Sbjct: 126 WSIPYTRGSETQSLAV----ARDGGRRFDKLDQGPVI-ADHPFAVDVTAFRAPFVFRSAR 180
Query: 188 ---------------------TTAWLGPDKRWRVIIGSKINRKGLAIL------YRSKDF 220
W + W V + ++ G A + +F
Sbjct: 181 LDVLLSLDEEVARNETAVQQAVDGWTEKNAPWYVAVSGGVHGVGPAQFLYRQNGGNASEF 240
Query: 221 VHWIKAKHPLHSVKGTG-------------MWECPDFFPVSTYGLNGLDTSD---MGPNT 264
+W + +E + ++ G + +G
Sbjct: 241 QYWEYLGEWWQEATNSSWGDEGTWAGRWGFNFETGNVLFLTEEGHDPQTGEVFVTLGTEG 300
Query: 265 KHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGA- 322
+ V + H+ + D+G YA+ A
Sbjct: 301 SGLPIVPQVSSIHDMLWAAGEVGVGSEQEGAKVEFSPSMAGFLDWGFSAYAAAGKVLPAS 360
Query: 323 ----------KNRRVLWGWVNESSSVNDD----VKKGWAGIQAIPRKLWL---------D 359
+R V + W+ D ++GW G +PR+L + +
Sbjct: 361 SAVSKTSGVEVDRYVSFVWLTGDQYEQADGFPTAQQGWTGSLLLPRELKVQTVENVVDNE 420
Query: 360 KSGKHLVQWPVVE-------IEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQADVEISFDV 412
+ V W V E + L + + L + Q + F
Sbjct: 421 LVREEGVSWVVGESDNQTATLRTLGITIARETKAALLANGSVTAEEDRTLQTAAVVPFAQ 480
Query: 413 SDFKKAEKLDPGWTNPQLLCSQKGASVKGALGPFGLLALASKDLKEYTAVFFRIFKGEDN 472
S K L AS + + G LAS+ E TA++++
Sbjct: 481 SPSSKFFVLTAQLE--------FPASARSSPLQSGFEILASEL--ERTAIYYQFSNES-- 528
Query: 473 KFVVLMCSDQSRSLQFFSFNISSISHPTSCFQTLF 507
+ D+S++ N S S LF
Sbjct: 529 -----LVVDRSQTSAAAPTNPGLDSFTESGKLRLF 558
|
| >3p2n_A 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-propeller, glycoside hydrolase family GH117, agaro-oligosaccharides, CARB hydrolase; 1.95A {Zobellia galactanivorans} Length = 408 | Back alignment and structure |
|---|
Score = 59.5 bits (143), Expect = 9e-10
Identities = 34/217 (15%), Positives = 63/217 (29%), Gaps = 24/217 (11%)
Query: 57 WINDPNGVMIYKGIYHLFYQYNP-------------KGAVWGNIVWAHSTSKDLINWIPH 103
DP+ ++ G Y+++Y + K W ++TS+D W
Sbjct: 94 VRRDPSAIIKENGKYYVWYSKSTGPTQGFGGDIEKDKVFPWDRCDIWYATSEDGWTWKEE 153
Query: 104 DPAIYPSQQS--DINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLRE 161
PA+ ++ D ++ K + Y + V +D
Sbjct: 154 GPAVTRGEKGAYDDRSVFTVEIMKWED-KYYLCYQTVKSPYNVRVKNQVGLAWADSPDGP 212
Query: 162 WVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFV 221
W KS + P+++P G +V I KG LY + +
Sbjct: 213 WTKSEE-PILSPADNGVWKGEEQDRFAVIKKGDFDSHKVHDPCIIPYKGKFYLYYKGEQM 271
Query: 222 HWIKAKHPLH-------SVKGTGMWECPDFFPVSTYG 251
+ G + + P+S G
Sbjct: 272 GEAITFGGRQIRHGVAIADNPKGPYVKSPYNPISNSG 308
|
| >3qc2_A Glycosyl hydrolase; 5-bladed beta propeller fold, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: PGE; 2.30A {Bacteroides ovatus} Length = 364 | Back alignment and structure |
|---|
Score = 57.4 bits (138), Expect = 3e-09
Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 27/188 (14%)
Query: 63 GVMIYKGIYHLFY---QYNPKGAVWGNIVWAHSTSKDLINW-IPHDPAIYPSQQSDINGC 118
+Y G + Y + G ++TS D ++ P YP S
Sbjct: 57 AATLYNGEIVVLYRAEDKSGVGIGHRTSRLGYATSTDGTHFQREKTPVFYPDNDSQKELE 116
Query: 119 WSGSA-----TILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAP 173
W G + + YT + H ++ +A +N L++W K A
Sbjct: 117 WPGGCEDPRIAVTDDGLYVMMYTQWNRHVPRLA-VATSRN-----LKDWTKHGPAFAKAF 170
Query: 174 DAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAI-------LYRSKDFVHWIKA 226
D + + + + K+N K S D +HW
Sbjct: 171 D-----GKFFNLGCKSGSILTEVVKGKQVIKKVNGKYFMYWGEEHVFAATSDDLIHWTPI 225
Query: 227 KHPLHSVK 234
+ S+K
Sbjct: 226 VNIDGSLK 233
|
| >3r4z_A Glycosyl hydrolase family 32, N terminal; AGAR metabolism, neoagarobiose, 3,6-anhydro-L-galactose, ALP galactopyranose, bioenergy; HET: GLA; 1.55A {Saccharophagus degradans} PDB: 3r4y_A* Length = 374 | Back alignment and structure |
|---|
Score = 56.7 bits (136), Expect = 6e-09
Identities = 35/200 (17%), Positives = 59/200 (29%), Gaps = 26/200 (13%)
Query: 43 QPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQY-------------NPKGAVWGNIVW 89
P + ++ DP+ V+ YH++Y K W
Sbjct: 36 TPLKGDLAYEEGVIR-RDPSAVLKVDDEYHVWYTKGEGETVGFGSDNPEDKVFPWDKTEV 94
Query: 90 AHSTSKDLINWIPHDPAIYPSQQS--DINGCWSGSATILPGEKPAIFYTGIDP----HNR 143
H+TSKD I W PAI D ++ G + Y + +
Sbjct: 95 WHATSKDKITWKEIGPAIQRGAAGAYDDRAVFTPEVLRHNG-TYYLVYQTVKAPYLNRSL 153
Query: 144 QVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIG 203
+ +A SD W KS P+++P+ +T G +V
Sbjct: 154 EHIAIAY----SDSPFGPWTKSDA-PILSPENDGVWDTDEDNRFLVKEKGSFDSHKVHDP 208
Query: 204 SKINRKGLAILYRSKDFVHW 223
+ LY + +
Sbjct: 209 CLMFFNNRFYLYYKGETMGE 228
|
| >4ak5_A Anhydro-alpha-L-galactosidase; hydrolase, marine glycoside hydrolase, marine polysaccharide degradation, marine cazymes, AGAR metabolism; 1.70A {Bacteroides plebeius} PDB: 4ak7_A* 4ak6_A Length = 404 | Back alignment and structure |
|---|
Score = 55.6 bits (133), Expect = 2e-08
Identities = 25/195 (12%), Positives = 54/195 (27%), Gaps = 26/195 (13%)
Query: 42 NQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQY-------------NPKGAVWGNIV 88
+P + ++ DP+ ++ Y+++Y K W
Sbjct: 75 MEPLKGDLAYEEGV-VRRDPSAMLKIGDTYYVWYSKSYGPTQGFAGDIEKDKVFPWDRCD 133
Query: 89 WAHSTSKDLINWIPHDPAIYPSQQS--DINGCWSGSATILPGEKPAIFYTGID----PHN 142
++TSKD + W A+ ++ D ++ G K + Y +
Sbjct: 134 IWYATSKDGLTWKEQGIAVKRGEKGAYDDRSVFTPEVMEWKG-KYYLCYQAVKSPYTVRV 192
Query: 143 RQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVII 202
+ +A + + P++ P + G +V
Sbjct: 193 KNTIGMACADSPEGLW-----TKTDKPVLEPSDTGEWEGDEDNRFKVVSKGDFDSHKVHD 247
Query: 203 GSKINRKGLAILYRS 217
I G +Y
Sbjct: 248 PCIIPYNGKFYMYYK 262
|
| >3taw_A Hypothetical glycoside hydrolase; 5-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.70A {Parabacteroides distasonis} PDB: 3r67_A* Length = 356 | Back alignment and structure |
|---|
Score = 52.8 bits (126), Expect = 1e-07
Identities = 30/185 (16%), Positives = 60/185 (32%), Gaps = 28/185 (15%)
Query: 55 KNWINDPNGVMIYKGIYHLFY---QYNPKGAVWGNIVWAHSTSKDLINWIPHD-PAIYPS 110
++ +P IY G + Y + +G ++TS D I++ PA YP+
Sbjct: 47 ESDTFNP-AATIYDGKIVVMYRAEDNSAQGIGSRTSRLGYATSTDGIHFERDTKPAFYPA 105
Query: 111 QQSDINGCWSGSA-----TILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKS 165
+ + G + + YT + ++ +A K+ L+ W K
Sbjct: 106 KDNQAENECPGGTEDPRIAMTEDGTYVLLYTQWNRKVPRLA-VATSKD-----LKHWTKF 159
Query: 166 PKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAI-------LYRSK 218
P + + + A L + + +K+N K S
Sbjct: 160 G--PAFEKAYNGKFKDEATKS---ASLVTTLKGDKQVIAKVNGKYFMYWGEKNVYAATSD 214
Query: 219 DFVHW 223
+ + W
Sbjct: 215 NLIDW 219
|
| >2yfr_A Levansucrase, inulosucrase; fructosyltransferase, glycoside hydrolase family GH68, trans sugar utilization; 1.75A {Lactobacillus johnsonii} PDB: 2yft_A* 2yfs_A* Length = 571 | Back alignment and structure |
|---|
Score = 52.6 bits (125), Expect = 2e-07
Identities = 30/200 (15%), Positives = 51/200 (25%), Gaps = 31/200 (15%)
Query: 34 QTSQSTSPNQPYRTGYHFQPPKNWIND--------PNGVMIYKGIYHLFYQYNPKGAVW- 84
+ P + I D V + G +
Sbjct: 103 ASKIKNMPAAKTLDAQSGKVEDLEIWDSWPVQDAKTGYVSNWNGYQLVIGMMGVPNVNDN 162
Query: 85 -GNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDP--H 141
+++ D +W P + + WSGSAT+ ++YT +D +
Sbjct: 163 HIYLLYNKYGDNDFNHWKNAGPIFGLG--TPVIQQWSGSATLNKDGSIQLYYTKVDTSDN 220
Query: 142 NRQVQNLAVPK---NLSDPYLREWVKSPKN--PLMAPD------------AMNQINTSSF 184
N Q LA NL + + N + D + +
Sbjct: 221 NTNHQKLASATVYLNLEKDQDKISIAHVDNDHIVFEGDGYHYQTYDQWKETNKGADNIAM 280
Query: 185 RDPTTAWLGPDKRWRVIIGS 204
RD R+ V S
Sbjct: 281 RDAHVIDDDNGNRYLVFEAS 300
|
| >1oyg_A Levansucrase; glycoside hydrolase, beta-propeller, TR; 1.50A {Bacillus subtilis} SCOP: b.67.2.2 PDB: 1pt2_A* 3byl_A 3byn_A* 3byk_A 3byj_A 2vdt_A 3om4_A* 3om7_C* 3om6_A* 3om5_A* 3om2_A* Length = 447 | Back alignment and structure |
|---|
Score = 46.4 bits (109), Expect = 2e-05
Identities = 27/170 (15%), Positives = 52/170 (30%), Gaps = 24/170 (14%)
Query: 71 YHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEK 130
++FYQ + ++ KD + +D + Q WSGSAT K
Sbjct: 95 IYMFYQKVGETSIDSWKNAGR-VFKDSDKFDANDSILKDQTQ-----EWSGSATFTSDGK 148
Query: 131 PAIFYTGIDPHNRQVQNLAVPK-NLSDPYLREWVKSPKNP--LMAPD------------- 174
+FYT + Q L + N+S + ++ + D
Sbjct: 149 IRLFYTDFSGKHYGKQTLTTAQVNVSASDSSLNINGVEDYKSIFDGDGKTYQNVQQFIDE 208
Query: 175 -AMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHW 223
+ + + RDP ++ V + G + ++
Sbjct: 209 GNYSSGDNHTLRDPHY-VEDKGHKYLVFEANTGTEDGYQGEESLFNKAYY 257
|
| >1vkd_A Conserved hypothetical protein TM1225; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.10A {Thermotoga maritima} SCOP: b.67.2.4 Length = 338 | Back alignment and structure |
|---|
Score = 45.4 bits (107), Expect = 2e-05
Identities = 19/193 (9%), Positives = 52/193 (26%), Gaps = 21/193 (10%)
Query: 102 PHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLRE 161
+P I + ++ + + + + + R + K+
Sbjct: 40 SKNPIIGRNPVPKGARVFNSAV-VPYNGEFVGVFRIDHKNTRPFLHFGRSKDG-----IN 93
Query: 162 WVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFV 221
W P+ S DP + + + + + + + + +KDF
Sbjct: 94 WEIEPEEIQWVDVNGEPFQPSYAYDPRVVKI--EDTYYITFCTDDHGPTIG-VGMTKDFK 150
Query: 222 HWIKAKHPLHSVKGTG------------MWECPDFFPVSTYGLNGLDTSDMGPNTKHVLK 269
+++ + G M P + +G L S + +
Sbjct: 151 TFVRLPNAYVPFNRNGVLFPRKINGKYVMLNRPSDNGHTPFGDIFLSESPDMIHWGNHRF 210
Query: 270 VSLDDTKHEYYTV 282
V + + + +
Sbjct: 211 VLGRSSYNWWENL 223
|
| >1vkd_A Conserved hypothetical protein TM1225; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.10A {Thermotoga maritima} SCOP: b.67.2.4 Length = 338 | Back alignment and structure |
|---|
Score = 42.3 bits (99), Expect = 3e-04
Identities = 39/236 (16%), Positives = 70/236 (29%), Gaps = 41/236 (17%)
Query: 27 HHVYRNLQTSQSTSPNQPY--RTGYHFQP----PKNWINDPN-----------GVMIYKG 69
HH + +++ PN P+ R + P KN I N V+ Y G
Sbjct: 7 HHHHHHMKVFTEKIPNIPWEERPEGYTGPVWRYSKNPIIGRNPVPKGARVFNSAVVPYNG 66
Query: 70 IYHLFYQYNPKGAVWGNIVWAHSTSKDLINW-IPHDPAIYPS---QQSDINGCWSGSATI 125
+ ++ + K SKD INW I + + + + +
Sbjct: 67 EFVGVFRIDHKN---TRPFLHFGRSKDGINWEIEPEEIQWVDVNGEPFQPSYAYDPRVVK 123
Query: 126 LPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFR 185
+ I + D + + + K+ + +V+ P+A N +
Sbjct: 124 IED-TYYITFCTDD--HGPTIGVGMTKD-----FKTFVR-------LPNAYVPFNRNGVL 168
Query: 186 DPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWEC 241
P R + G L S D +HW + + WE
Sbjct: 169 FPRKINGKYVMLNR-PSDNGHTPFGDIFLSESPDMIHWGNHR-FVLGRSSYNWWEN 222
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 511 | |||
| 3ugf_A | 546 | Sucrose:(sucrose/fructan) 6-fructosyltransferase; | 100.0 | |
| 1st8_A | 543 | Fructan 1-exohydrolase IIA; five fold beta propell | 100.0 | |
| 2ac1_A | 541 | Invertase; five fold beta propeller, hydrolase; HE | 100.0 | |
| 3pij_A | 526 | Beta-fructofuranosidase; five-bladed beta-propelle | 100.0 | |
| 3sc7_X | 516 | Inulinase; glycoside hydrolase family 32, glycosyl | 100.0 | |
| 1y4w_A | 518 | EXO-inulinase; glycoside hydrolase FAMI crystallog | 100.0 | |
| 3kf3_A | 509 | Invertase; GH32, glycoprotein, glycosidase, hydrol | 100.0 | |
| 4ffh_A | 492 | Levan fructotransferase; glycoside hydrolase; HET: | 100.0 | |
| 3lig_A | 634 | Fructosyltransferase; five bladed beta-propeller f | 100.0 | |
| 1w2t_A | 432 | Beta fructosidase; hydrolase, glycosidase, inverta | 100.0 | |
| 2yfr_A | 571 | Levansucrase, inulosucrase; fructosyltransferase, | 99.98 | |
| 1oyg_A | 447 | Levansucrase; glycoside hydrolase, beta-propeller, | 99.97 | |
| 3r4z_A | 374 | Glycosyl hydrolase family 32, N terminal; AGAR met | 99.93 | |
| 3p2n_A | 408 | 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-p | 99.93 | |
| 1w18_A | 493 | Levansucrase; transferase, fructosyl transferase, | 99.93 | |
| 4ak5_A | 404 | Anhydro-alpha-L-galactosidase; hydrolase, marine g | 99.92 | |
| 1vkd_A | 338 | Conserved hypothetical protein TM1225; structural | 99.92 | |
| 3qz4_A | 311 | Endo-1,4-beta-xylanase D; 5-bladed beta-propeller | 99.9 | |
| 3qc2_A | 364 | Glycosyl hydrolase; 5-bladed beta propeller fold, | 99.88 | |
| 3qee_A | 307 | Beta-xylosidase/alpha-L-arabinfuranosidase, Gly43; | 99.86 | |
| 1gyh_A | 318 | Arabinan endo-1,5-alpha-L-arabinosidase A; arabina | 99.84 | |
| 3taw_A | 356 | Hypothetical glycoside hydrolase; 5-bladed beta-pr | 99.83 | |
| 1uv4_A | 293 | Arabinase, arabinan-endo 1,5-alpha-L-arabinase; hy | 99.83 | |
| 3vss_A | 496 | Beta-fructofuranosidase; glycoside hydrolase famil | 99.83 | |
| 3kst_A | 306 | Endo-1,4-beta-xylanase; structural genomics, joint | 99.81 | |
| 3cu9_A | 314 | Intracellular arabinanase; glycosyl hydrolase, hig | 99.8 | |
| 3p2n_A | 408 | 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-p | 99.69 | |
| 1yrz_A | 528 | Xylan beta-1,4-xylosidase; structural genomics, ny | 99.69 | |
| 3taw_A | 356 | Hypothetical glycoside hydrolase; 5-bladed beta-pr | 99.65 | |
| 3c7f_A | 487 | Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta- | 99.64 | |
| 3nqh_A | 441 | Glycosyl hydrolase; structural genomics, joint cen | 99.63 | |
| 1yif_A | 533 | Beta-1,4-xylosidase; glycosidase, xylan, structura | 99.62 | |
| 2exh_A | 535 | Beta-D-xylosidase; glykosidase, hydrolsase, family | 99.62 | |
| 3qc2_A | 364 | Glycosyl hydrolase; 5-bladed beta propeller fold, | 99.56 | |
| 1vkd_A | 338 | Conserved hypothetical protein TM1225; structural | 99.56 | |
| 3r4z_A | 374 | Glycosyl hydrolase family 32, N terminal; AGAR met | 99.53 | |
| 3vsf_A | 526 | Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactana | 99.48 | |
| 4ak5_A | 404 | Anhydro-alpha-L-galactosidase; hydrolase, marine g | 99.44 | |
| 3c2u_A | 538 | Xylosidase/arabinosidase; tetramer, glycoside hydr | 99.39 | |
| 2x8s_A | 470 | Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; | 99.35 | |
| 3zxk_A | 542 | Hiaxhd3; hydrolase, sugar binding protein; HET: XY | 99.04 | |
| 3cpn_A | 330 | Beta-xylosidase, family 43 glycosyl hydrolase; str | 99.01 | |
| 3k1u_A | 330 | Beta-xylosidase, family 43 glycosyl hydrolase; str | 98.99 | |
| 3akh_A | 468 | Putative secreted alpha L-arabinofuranosidase II; | 98.97 | |
| 3qz4_A | 311 | Endo-1,4-beta-xylanase D; 5-bladed beta-propeller | 98.55 | |
| 3kst_A | 306 | Endo-1,4-beta-xylanase; structural genomics, joint | 98.44 | |
| 1uv4_A | 293 | Arabinase, arabinan-endo 1,5-alpha-L-arabinase; hy | 98.38 | |
| 1gyh_A | 318 | Arabinan endo-1,5-alpha-L-arabinosidase A; arabina | 98.24 | |
| 3cu9_A | 314 | Intracellular arabinanase; glycosyl hydrolase, hig | 98.18 | |
| 1w2t_A | 432 | Beta fructosidase; hydrolase, glycosidase, inverta | 98.18 | |
| 3qee_A | 307 | Beta-xylosidase/alpha-L-arabinfuranosidase, Gly43; | 98.11 | |
| 3akh_A | 468 | Putative secreted alpha L-arabinofuranosidase II; | 98.07 | |
| 3cpn_A | 330 | Beta-xylosidase, family 43 glycosyl hydrolase; str | 97.96 | |
| 1yif_A | 533 | Beta-1,4-xylosidase; glycosidase, xylan, structura | 97.88 | |
| 3c2u_A | 538 | Xylosidase/arabinosidase; tetramer, glycoside hydr | 97.87 | |
| 3vsf_A | 526 | Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactana | 97.87 | |
| 1yrz_A | 528 | Xylan beta-1,4-xylosidase; structural genomics, ny | 97.84 | |
| 3c7f_A | 487 | Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta- | 97.65 | |
| 3ugf_A | 546 | Sucrose:(sucrose/fructan) 6-fructosyltransferase; | 97.6 | |
| 3nqh_A | 441 | Glycosyl hydrolase; structural genomics, joint cen | 97.6 | |
| 2x8s_A | 470 | Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; | 97.54 | |
| 3k1u_A | 330 | Beta-xylosidase, family 43 glycosyl hydrolase; str | 97.5 | |
| 2exh_A | 535 | Beta-D-xylosidase; glykosidase, hydrolsase, family | 97.45 | |
| 1w18_A | 493 | Levansucrase; transferase, fructosyl transferase, | 97.34 | |
| 1st8_A | 543 | Fructan 1-exohydrolase IIA; five fold beta propell | 97.09 | |
| 1oyg_A | 447 | Levansucrase; glycoside hydrolase, beta-propeller, | 96.88 | |
| 4ffh_A | 492 | Levan fructotransferase; glycoside hydrolase; HET: | 96.87 | |
| 2ac1_A | 541 | Invertase; five fold beta propeller, hydrolase; HE | 96.81 | |
| 1y4w_A | 518 | EXO-inulinase; glycoside hydrolase FAMI crystallog | 96.79 | |
| 3zxk_A | 542 | Hiaxhd3; hydrolase, sugar binding protein; HET: XY | 96.77 | |
| 2yfr_A | 571 | Levansucrase, inulosucrase; fructosyltransferase, | 96.74 | |
| 3pij_A | 526 | Beta-fructofuranosidase; five-bladed beta-propelle | 96.65 | |
| 3a72_A | 355 | EXO-arabinanase; arabinase, glycosyl hydrolase, hy | 96.04 | |
| 3a72_A | 355 | EXO-arabinanase; arabinase, glycosyl hydrolase, hy | 95.93 | |
| 2ydt_A | 367 | EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; | 95.87 | |
| 2ydt_A | 367 | EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; | 95.81 | |
| 3kf3_A | 509 | Invertase; GH32, glycoprotein, glycosidase, hydrol | 95.36 | |
| 1w8o_A | 601 | Bacterial sialidase; 3D-structure, glycosidase, hy | 94.79 | |
| 4fj6_A | 523 | Glycoside hydrolase family 33, candidate sialidas; | 94.65 | |
| 3lig_A | 634 | Fructosyltransferase; five bladed beta-propeller f | 94.39 | |
| 3vss_A | 496 | Beta-fructofuranosidase; glycoside hydrolase famil | 94.02 | |
| 4fj6_A | 523 | Glycoside hydrolase family 33, candidate sialidas; | 93.04 | |
| 2xzi_A | 386 | KDNAse, extracellular sialidase/neuraminidase, put | 91.58 | |
| 1w8o_A | 601 | Bacterial sialidase; 3D-structure, glycosidase, hy | 91.44 | |
| 3sc7_X | 516 | Inulinase; glycoside hydrolase family 32, glycosyl | 90.64 | |
| 2bf6_A | 449 | Sialidase, EXO-alpha-sialidase; sialic acid, hydro | 90.12 | |
| 2w20_A | 471 | Sialidase A; secreted, cell WALL, hydrolase, glyco | 90.02 | |
| 2sli_A | 679 | Intramolecular trans-sialidase; hydrolase, neurami | 89.26 | |
| 2xzi_A | 386 | KDNAse, extracellular sialidase/neuraminidase, put | 88.42 | |
| 1ms9_A | 648 | Trans-sialidase; trans-glycosylation, protein-acrb | 86.91 | |
| 2jkb_A | 686 | Sialidase B; intramolecular trans-sialidase, lyase | 84.02 | |
| 3sil_A | 379 | Sialidase; glycosidase, hydrolase; HET: PO4 GOL; 1 | 83.65 | |
| 2bf6_A | 449 | Sialidase, EXO-alpha-sialidase; sialic acid, hydro | 83.04 |
| >3ugf_A Sucrose:(sucrose/fructan) 6-fructosyltransferase; glycoside hydrolase family 32; HET: NAG FUC BMA MAN; 1.70A {Pachysandra terminalis} PDB: 3ugg_A* 3ugh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-111 Score=908.27 Aligned_cols=446 Identities=43% Similarity=0.827 Sum_probs=395.4
Q ss_pred CCCCccccccCCCCCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCccCCCeEeee
Q 010428 43 QPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGS 122 (511)
Q Consensus 43 ~~~Rp~yHf~p~~gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D~~g~~SGs 122 (511)
+.+||+|||+|+.||||||||++|++|+|||||||||+++.||+|+||||+|+|||||+++|+||.|+++||++||||||
T Consensus 16 ~~~Rp~yH~~P~~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHa~S~DLvhW~~~p~AL~P~~~~D~~G~~SGS 95 (546)
T 3ugf_A 16 SWQRTAFHFQPERSWMSDPDGPIFYKGWYHFFYQYNPDNPVWGNNTWGHTVSRDLIHWLYLPLALAADQWYDMQGVFSGS 95 (546)
T ss_dssp HHTSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEESSCSSSCSCEEEEEEESSSSSCEECCCCBCSCSGGGTTCEEEEE
T ss_pred hhcCCeEEEeCCCCCccCCceeEEECCEEEEEEecCCCCCCCCCcEEEEEEcCCcCccccCCCCCCCCcccccCCcCcce
Confidence 35699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCceEEEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEE
Q 010428 123 ATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVII 202 (511)
Q Consensus 123 av~~~dg~~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ 202 (511)
|++++||+++|+|||+.....|.||+|+|+|++|++|++|+|++.||||.+| +++...+||||+|+|++++|+|||++
T Consensus 96 avv~~dg~~~l~YTg~~~~~~q~q~lA~S~D~~d~~l~~w~K~~~nPVi~~p--~g~~~~~fRDPkVvw~~~~g~w~Mvi 173 (546)
T 3ugf_A 96 ATCLPDGRIMMLYTGVTKEMVEMLSLAYPADLSDPLLVEWVKYPGNPILSAP--PGVSPTEFRDASTGWYVSNGTWRIAI 173 (546)
T ss_dssp EEECTTSCEEEEEEEECTTCCEEEEEEEESCTTCTTCCCEEECTTCCCBCCC--TTSCTTSCCCBCCCEECSTTCEEEEE
T ss_pred EEEeeCCeEEEEEEeccCCCcEEEEEEEECCCCCCccceeEEcCCCceEeCC--CCCCcceeeccceEeECCCCEEEEEE
Confidence 9877899999999999777789999999999999999999999899999877 67777899999988987789999999
Q ss_pred eeecCCccEEEEEEcCCCCCcEEcccccccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCCCceeEEEE
Q 010428 203 GSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTV 282 (511)
Q Consensus 203 ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~~~~~~Y~i 282 (511)
|++.+..|++++|+|+||++|++.+.++......+||||||||+|+..+.+|+++|++|.+.||||+.|.+..+.++|+|
T Consensus 174 Ga~~~~~G~vllY~S~DL~~W~~~~~~~~~~~~~gmwECPDlf~l~~~~~~gl~~s~~g~~~k~Vl~~s~~~~~~~~Y~i 253 (546)
T 3ugf_A 174 GAKYNTTGIAMVYETKDFKSFKLLEELLHAVPDTGLWECVDLYPVSTTGEKGLETSVNGPKVKHVLKASIDEQQRDYYAI 253 (546)
T ss_dssp EEEETTEEEEEEEEESSSSSCEECSSCSEEETTCCCEEEEEEEEEESSCSSCCCTTCCSTTEEEEEEEEETTTTEEEEEE
T ss_pred EEccCCcceEEEEECCCCCCceEcccccccCCCCCeEECCeEEEECCcCccceeecccCCceeEEEEecccCCCceEEEE
Confidence 99887789999999999999999987766545567999999999997666789999998889999999998878899999
Q ss_pred EEEeCCCCeeecCCCCcCCCCccccccCCCccceeeecCCCCcEEEEEeccCCCCCCCCCCCCCccccccceEEEEec-C
Q 010428 283 GTYSTAKDRYVPDEGSVESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDK-S 361 (511)
Q Consensus 283 G~~d~~~~~F~p~~~~~d~~~~~~lD~G~fYA~qtf~d~~~grril~gW~~~~~~~~~~~~~gW~g~lslPReL~l~~-~ 361 (511)
|+||+++.+|+|+....|.+.++++|+|.|||||||.|+.+||||+||||++++...++.++||+|+|||||||+|++ +
T Consensus 254 G~~d~~~~~f~~~~~~~d~g~~~~lD~GdfYA~qtf~d~~~gRril~gWm~~~d~~~~~~~~gW~g~ltlPRel~l~~~~ 333 (546)
T 3ugf_A 254 GTYDLGTNKWTPDNPEEDVGIGLRYDWGKYYASKTFYDPKKQRRVVWAWTKELDSEVADREKGWANVQTIPRTVLLDQKT 333 (546)
T ss_dssp EEEETTTTEEEESCGGGCTTTSCBSCSSSCEEEEEEEETTTTEEEEEEEECCCSCHHHHHHHTEECEECCCEEEEECTTT
T ss_pred eeecCCCCeeecCCcccccCccccccCCCccCcceeecCCCCCEEEEEeCCCCCcCCCCcccCccCcceeCEEEEEEeCC
Confidence 999998889999876667777789999999999999997679999999999999876677899999999999999984 4
Q ss_pred CCeEEecchHHHHHhhhcceeccceEecCCcEEEEcccccceeeeEEEEEEcccccccccCCCc-cCcccccc-ccCCcc
Q 010428 362 GKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQADVEISFDVSDFKKAEKLDPGW-TNPQLLCS-QKGASV 439 (511)
Q Consensus 362 g~~L~q~Pv~el~~LR~~~~~~~~~~~~~~~~~~~~~~~~~~~die~~~~l~~~~~~e~~~~~~-~~~~~~~~-~~~~~~ 439 (511)
|.+|+|+||+||++||.+++.+.+..+++++.+++.++++.|+|||++|++.. +.++... .+.+..|. ..+|+.
T Consensus 334 g~~L~q~Pv~El~~LR~~~~~~~~~~~~~g~~~~l~~~~~~q~di~~~f~~~~----~~l~~~~~~~~~~~c~~~~ga~~ 409 (546)
T 3ugf_A 334 GTNVLLWPVEEVESLRLSSKEFSKVKAGAGSVVPLDVGTATQLDIIAEFEIDK----EALEGTIEADMGYNCTTSGGAAE 409 (546)
T ss_dssp SSSEEEEECGGGGGGEEEEEEEEEEEECTTEEEECCCSCCSEEEEEEEEEECC---------------CCCGGGSCGGGS
T ss_pred CCEEEEEehHHHHHHhcCcceecceEecCCCeEEecCCCccEEEEEEEEEecc----cccccccccccccccccccCccc
Confidence 55799999999999999998888999999999999998899999999999852 1121111 24566787 577889
Q ss_pred cCCcccceeEEeecCCCceeeEEEEEEEeCCCCcEEEEEecCCCCccCccccCcc
Q 010428 440 KGALGPFGLLALASKDLKEYTAVFFRIFKGEDNKFVVLMCSDQSRSLQFFSFNIS 494 (511)
Q Consensus 440 ~~~~g~~Gl~v~~s~~~~E~t~i~f~~~~~~~~~~~~~~~~d~~~Ss~~~~~~~~ 494 (511)
+|..|||||.|+||++++|+|+|||++++..+++.+++||+||+|||+.+...+.
T Consensus 410 ~g~~g~fgl~v~a~~~~~E~T~v~f~~~~~~~~~~~~~~~~D~srSs~~~~~~~~ 464 (546)
T 3ugf_A 410 RGVLGPFGLLVSATENLSEQTPVYFYIAKGTDGNFKTFFCLDESRSSKASDVSKQ 464 (546)
T ss_dssp CBTTBCEEEEEEECTTCSSCEEEEEEEEC----CCEEEEEEECTTSCSCSSSCCC
T ss_pred cCcccceEEEEEeCCCCceEEEEEEEeeccCCCcceEEEeeccccccCCcCCccc
Confidence 9999999999999999999999999999877678899999999999998776543
|
| >1st8_A Fructan 1-exohydrolase IIA; five fold beta propeller; HET: NDG NAG MAN; 2.35A {Cichorium intybus} PDB: 2add_A* 2ade_A* 2aey_A* 2aez_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-103 Score=853.31 Aligned_cols=447 Identities=58% Similarity=1.113 Sum_probs=399.8
Q ss_pred CCCCCCccccccCCCCCccCCcceEEECCEEEEEeeeCCCCCCCCC-cEEEEEEeCCCCcceecCCCCCCCCCccCCCeE
Q 010428 41 PNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGN-IVWAHSTSKDLINWIPHDPAIYPSQQSDINGCW 119 (511)
Q Consensus 41 ~~~~~Rp~yHf~p~~gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~-~~WgHa~S~DLvhW~~~~~aL~P~~~~D~~g~~ 119 (511)
.+++|||+|||+||.||||||||++|++|+|||||||+|+++.||+ |+||||+|+|||||+++++||.|+.++|++|||
T Consensus 3 ~~~~~Rp~~H~~p~~gw~NDPnG~~~~~G~yHlFYQ~~P~~~~~g~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~Gv~ 82 (543)
T 1st8_A 3 IEQPYRTGYHFQPPSNWMNDPNGPMLYQGVYHFFYQYNPYAATFGDVIIWGHAVSYDLVNWIHLDPAIYPTQEADSKSCW 82 (543)
T ss_dssp CSSTTSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEESSCSSCCSCCEEEEEEESSSSSEEECCCSBCCCSGGGTTEEE
T ss_pred cCccccccccccCCcCCeECCcccEEECCEEEEEEeeCCCCCCCCCccEEEEEECCCccceEECCeeccCCCccccCCEE
Confidence 5688999999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred eeeEEEcCCCceEEEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEE
Q 010428 120 SGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWR 199 (511)
Q Consensus 120 SGsav~~~dg~~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~ 199 (511)
||||+++++|+++|||||.+....|.||+|+|+|++||+|++|+|++.||||.++ +++...+||||+|+|++++|+||
T Consensus 83 SGsav~~~dg~~~l~YTg~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPVi~~~--~g~~~~~fRDP~vvw~~~~g~w~ 160 (543)
T 1st8_A 83 SGSATILPGNIPAMLYTGSDSKSRQVQDLAWPKNLSDPFLREWVKHPKNPLITPP--EGVKDDCFRDPSTAWLGPDGVWR 160 (543)
T ss_dssp EEEEEEETTTEEEEEEEEECTTSCEEEEEEEESCTTCTTCCCEEECTTCCSBCCC--TTCCTTSEECCCCCEECTTSCEE
T ss_pred cceEEEeeCCEEEEEEEEeCCCCcEEEEEEEECCCCCCCcceeEEcCCCcEEeCC--CCCCcCccCCCeEEEECCCCcEE
Confidence 9999887799999999996555689999999999999999999999889999766 67777899999977986789999
Q ss_pred EEEeeecCCccEEEEEEcCCCCCcEEcccccccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCCCceeE
Q 010428 200 VIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEY 279 (511)
Q Consensus 200 m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~~~~~~ 279 (511)
|++|++.+..|++++|+|+||++|++.+.++......+||||||||+|+.+|+.++++|++|.+.||||++|. .+.++
T Consensus 161 mv~ga~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~mwECPdlf~l~~~g~~~l~~s~~g~~~~~vl~~s~--~~~~~ 238 (543)
T 1st8_A 161 IVVGGDRDNNGMAFLYQSTDFVNWKRYDQPLSSADATGTWECPDFYPVPLNSTNGLDTSVYGGSVRHVMKAGF--EGHDW 238 (543)
T ss_dssp EEEEEEETTEEEEEEEEESSSSSCEECSSCSEEETTCCCCEEEEEEEEETTCSCCCCTTCCSTTEEEEEEEEE--TTEEE
T ss_pred EEEEEecCCceEEEEEECCCCCCcEECccccccCCCCCceeCCcEEEECCCCccceEecCCCCCceEEEEecc--CCccE
Confidence 9999987778999999999999999988777655567899999999999877789999999888899999997 56789
Q ss_pred EEEEEEeCCCCeeecCCCCc--CCCCccccccCCCccceeeecCCCCcEEEEEeccCCCCCCCCCCCCCccccccceEEE
Q 010428 280 YTVGTYSTAKDRYVPDEGSV--ESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLW 357 (511)
Q Consensus 280 Y~iG~~d~~~~~F~p~~~~~--d~~~~~~lD~G~fYA~qtf~d~~~grril~gW~~~~~~~~~~~~~gW~g~lslPReL~ 357 (511)
|++|+||.++.+|+|+.... |.+.++++|+|.|||+|||.|+.+||||+||||++++...++.++||+|+|||||||+
T Consensus 239 Y~iG~~d~~~~~f~~~~~~~~~d~~~~~~lD~GdfYA~qtf~~~~~grri~~gW~~~~~~~~~~~~~gW~g~ltlPRel~ 318 (543)
T 1st8_A 239 YTIGTYSPDRENFLPQNGLSLTGSTLDLRYDYGQFYASKSFFDDAKNRRVLWAWVPETDSQADDIEKGWAGLQSFPRALW 318 (543)
T ss_dssp EEEEEEETTTTEEEETTCCCCCSSTTSEESBSSSCEEEEEEEETTTTEEEEEEEECCCSCHHHHHHHTEECEECCCEEEE
T ss_pred EEEEEEeCCCCeEeeCCccccccccceeeccCCCcccccEeecCCCCCEEEEEecCCCCcCCCCCCCCccceeeeCEEEE
Confidence 99999999878999987654 5555679999999999999997569999999999998766667899999999999999
Q ss_pred EecCCCeEEecchHHHHHhhhcceeccceEecCCcEEEEcccccceeeeEEEEEEcccccccccCCCccCccccccccCC
Q 010428 358 LDKSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQADVEISFDVSDFKKAEKLDPGWTNPQLLCSQKGA 437 (511)
Q Consensus 358 l~~~g~~L~q~Pv~el~~LR~~~~~~~~~~~~~~~~~~~~~~~~~~~die~~~~l~~~~~~e~~~~~~~~~~~~~~~~~~ 437 (511)
|+++|++|+|+||+||++||.+.+.+.+..+..+..+++.++.+.++|++++|++.++++++.+++.+.+.+..|...++
T Consensus 319 l~~~g~~L~q~Pv~El~~LR~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (543)
T 1st8_A 319 IDRNGKQLIQWPVEEIEELRQNQVNLQNKNLKPGSVLEIHGIAASQADVTISFKLEGLKEAEVLDTTLVDPQALCNERGA 398 (543)
T ss_dssp ECTTSSSEEEEECGGGGGGEEEEEEEEEEEECTTEEEECCSSCTTEEEEEEEEEECCGGGSEECCCSSCCHHHHHHHSCT
T ss_pred EEeCCCEEEEeEhHHHHHhhcCcccceeEEecCCceEEecccccceeeEEEEEeeccccccccccccccccccccccccc
Confidence 98778679999999999999988877777787787788888888999999999997666667776655455567888888
Q ss_pred cccCCcccceeEEeecCCCceeeEEEEEEEeCCCCcEEEEEecCCCCccCcccc
Q 010428 438 SVKGALGPFGLLALASKDLKEYTAVFFRIFKGEDNKFVVLMCSDQSRSLQFFSF 491 (511)
Q Consensus 438 ~~~~~~g~~Gl~v~~s~~~~E~t~i~f~~~~~~~~~~~~~~~~d~~~Ss~~~~~ 491 (511)
+++++.++||+.++++.+++|.|.|+|++++..+++..++||+|++||+.....
T Consensus 399 ~~~~~~~~fgl~~~~~~~~~e~t~i~~~~~~~~~~~~~~~~~~Dr~rs~~~~~~ 452 (543)
T 1st8_A 399 SSRGALGPFGLLAMASKDLKEQSAIFFRVFQNQLGRYSVLMCSDLSRSTVRSNI 452 (543)
T ss_dssp TSCCSSCCEEEEEEECTTSSSCEEEEEEEEECTTSCEEEEEEEECTTSCSCSSC
T ss_pred cccccccceEEEEEccCCCcccEEEEEEeecccCCeEEEEEEecccccCccccc
Confidence 889999999999999999999999999999875578888999999999876543
|
| >2ac1_A Invertase; five fold beta propeller, hydrolase; HET: NAG MAN; 2.15A {Arabidopsis thaliana} PDB: 2xqr_A* 2oxb_A* 2qqw_A* 2qqv_A* 2qqu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-103 Score=853.69 Aligned_cols=451 Identities=71% Similarity=1.261 Sum_probs=400.2
Q ss_pred CCCCCCccccccCCCCCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCccCCCeEe
Q 010428 41 PNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWS 120 (511)
Q Consensus 41 ~~~~~Rp~yHf~p~~gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D~~g~~S 120 (511)
.+++|||+|||+||.||||||||++|++|+|||||||+|+++.||+|+||||+|+|||||+++++||.|+++||++||||
T Consensus 4 ~~~~~Rp~~H~~p~~gw~NDPnG~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~G~~S 83 (541)
T 2ac1_A 4 VNQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWDPHPPAIFPSAPFDINGCWS 83 (541)
T ss_dssp -CCTTSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEECTTCSSSCSCEEEEEEESSSSSBEEEEEEECCCSGGGTTCEEE
T ss_pred cCcccccceeecCccCCeeCCCccEEECCEEEEEEeeCCCCCCCCCcEEEEEECCCccceEECceeecCCCccccCCEEc
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEcCCCceEEEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEE
Q 010428 121 GSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRV 200 (511)
Q Consensus 121 Gsav~~~dg~~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m 200 (511)
|||+++++|+++|||||++....|.||+|+|+|++||+|++|+|++.||||.+++.+++...+||||+|+|++++|+|||
T Consensus 84 Gsav~~~dg~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~nPVi~~~~~~~~~~~~fRDP~vvw~~~~g~w~m 163 (541)
T 2ac1_A 84 GSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRV 163 (541)
T ss_dssp EEEEECTTSCEEEEEEEECTTSCEEEEEEEESCTTCTTCCCEEECTTCCSBCCCTTTCCCTTSEECCCCCEECTTSCEEE
T ss_pred ceEEEeeCCEEEEEEEEeCCCCcEEEEEEEECCCCCCCceeEEecCCCcEEcCCCCCCCCCCceECCeEEeEeCCCeEEE
Confidence 99988779999999999755568999999999999999999999988999965422345578999999889866899999
Q ss_pred EEeeecCCccEEEEEEcCCCCCcEEcccccccCCCCCceecCceEEeccCCCCCccccCCCCC---ceeEEEEeeCCCce
Q 010428 201 IIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPN---TKHVLKVSLDDTKH 277 (511)
Q Consensus 201 ~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~---~k~vL~~S~~~~~~ 277 (511)
++|++.+..|++++|+|+||++|++.+.++......+||||||||+|+.+|+.++.+|++|.+ .||||+.|.++.+.
T Consensus 164 ~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~mwECPdlf~l~~~g~~~l~~s~~g~~~~~~~~vl~~s~~~~~~ 243 (541)
T 2ac1_A 164 IIGSKIHRRGLAITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKH 243 (541)
T ss_dssp EEEEEETTEEEEEEEEESSSSSCEECSSCSEEEETSCCEEEEEEEEEESSCSCCCCTTCCCBTTBCEEEEEEEEETTTTE
T ss_pred EEEEecCCceEEEEEECCCCCCcEEcccccccCCCCCcccCCcEEEECCCCcceeEecCCCCCcccceeEEEeeecCCcc
Confidence 999987778999999999999999988777655566899999999999777778999998876 69999999988888
Q ss_pred eEEEEEEEeCCCCeeecCCCCcCCCCccccccCCCccceeeecCCCCcEEEEEeccCCCCCCCCCCCCCccccccceEEE
Q 010428 278 EYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLW 357 (511)
Q Consensus 278 ~~Y~iG~~d~~~~~F~p~~~~~d~~~~~~lD~G~fYA~qtf~d~~~grril~gW~~~~~~~~~~~~~gW~g~lslPReL~ 357 (511)
++|++|+||.++.+|+|+....+.+.++++|+|.|||+|||.|+.+||||+||||++++...++.++||+|+|||||||+
T Consensus 244 ~~Y~~G~~d~~~~~f~~~~~~~~~~~~~~lD~GdfYA~qtf~d~~~grri~~gW~~~~~~~~~~~~~gW~g~ltlPRel~ 323 (541)
T 2ac1_A 244 DYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDDVEKGWSGIQTIPRKIW 323 (541)
T ss_dssp EEEEEEEEETTTTEEEECTTCCSSTTSCBSCSSSCEEEEEEEETTTTEEEEEEEECCSSCHHHHHHHTEECEECCCEEEE
T ss_pred eEEEEEEEecCCCeEeeCCccccccceeeecCCCcccccEEecCCCCCEEEEEEeCCCCcCCCCCCCCcccccccCEEEE
Confidence 99999999998889999887666666789999999999999997569999999999998766667789999999999999
Q ss_pred EecCCCeEEecchHHHHHhhhcce-eccceEecCCcEEEEcccccceeeeEEEEEEcccccccccCCCccCccccccccC
Q 010428 358 LDKSGKHLVQWPVVEIEKLRVNQV-QVPSKLLKGGSVIEVTGVTAAQADVEISFDVSDFKKAEKLDPGWTNPQLLCSQKG 436 (511)
Q Consensus 358 l~~~g~~L~q~Pv~el~~LR~~~~-~~~~~~~~~~~~~~~~~~~~~~~die~~~~l~~~~~~e~~~~~~~~~~~~~~~~~ 436 (511)
|+++|++|+|+||+||++||.+.+ .+.+..+.+++.+++.++.+.++|++++|++..+++++.+++.+.+.+..|...+
T Consensus 324 l~~~g~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 403 (541)
T 2ac1_A 324 LDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMN 403 (541)
T ss_dssp ECTTSSSEEEEECGGGGGGBCSSCEEEEEEEECTTEEEECCSSCTTEEEEEEEEECSCGGGSEECCTTCCCHHHHHHHTC
T ss_pred EEcCCCEEEEeeHHHHHHhhccccccccceEecCCceeEecCCccceeeeEEEEeccccccccccccccccccccccccc
Confidence 987786799999999999999877 6777778777778888888889999999998766666777776667778898888
Q ss_pred CcccCCcccceeEEeecCCCceeeEEEEEEEeCCC--CcEEEEEecCCCCccCcccc
Q 010428 437 ASVKGALGPFGLLALASKDLKEYTAVFFRIFKGED--NKFVVLMCSDQSRSLQFFSF 491 (511)
Q Consensus 437 ~~~~~~~g~~Gl~v~~s~~~~E~t~i~f~~~~~~~--~~~~~~~~~d~~~Ss~~~~~ 491 (511)
++++++.++||+.++++.+++|.|.|+|++.+..+ ++..++||+|++||+.....
T Consensus 404 ~~~~~~~~~fgl~~~~~~~~~e~t~i~~~~~~~~~~~~~~~~~~~~Dr~rs~~~~~~ 460 (541)
T 2ac1_A 404 VSVKSGLGPFGLMVLASKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDN 460 (541)
T ss_dssp TTSCCSEEEEEEEEEECTTSSSCEEEEEEEEESSTTCSCEEEEEEEECTTSCSCTTS
T ss_pred cccccCccceEEEEEccCCCcccEEEEEEeccCcccCCceEEEEEeecCccCccccc
Confidence 88999999999999999999999999999998643 57788899999999976543
|
| >3pij_A Beta-fructofuranosidase; five-bladed beta-propeller and beta-sandwich domains, glycos hydrolase family 32, probiotic bacteria, fructose; HET: FRU; 1.80A {Bifidobacterium longum} PDB: 3pig_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-90 Score=747.44 Aligned_cols=385 Identities=29% Similarity=0.513 Sum_probs=320.0
Q ss_pred CCCCCCCccccccCCCCCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCccCCCeE
Q 010428 40 SPNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCW 119 (511)
Q Consensus 40 ~~~~~~Rp~yHf~p~~gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D~~g~~ 119 (511)
..+++|||+|||+||.||||||||++|++|+|||||||||+++.||+|+||||+|+|||||+++|+||.|+.++|.+|||
T Consensus 34 ~~~~~~Rp~~H~~p~~gwmNDPNG~~y~~G~YHlFYQ~~P~~~~wg~~~WgHa~S~DLvhW~~~~~aL~P~~~~d~~g~~ 113 (526)
T 3pij_A 34 KRNNRWYPKYHIASNGGWINDPNGLCFYKGRWHVFYQLHPYGTQWGPMHWGHVSSTDMLNWKREPIMFAPSLEQEKDGVF 113 (526)
T ss_dssp TCCCSSCCSSSCBCSSEEEEEEEEEEEETTEEEEEEEEETTCSSSCSBEEEEEEESSSSSEEECCCCBCCCBGGGTTEEE
T ss_pred ccCCCccccEeEeCCcCCeeCCeEEEEECCEEEEEEEcCCCCCCcCCcEEEEEEeCCCCCceeCeeccCCCCccccCCeE
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEEcCCCceEEEEeccCC--------CCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEE
Q 010428 120 SGSATILPGEKPAIFYTGIDP--------HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAW 191 (511)
Q Consensus 120 SGsav~~~dg~~~l~YTg~~~--------~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw 191 (511)
||||+++.||+++|+|||+.. .+.|.||+|+|+|++ |++|+|++ |||..| .+....+||||+| |
T Consensus 114 SGSav~~~dg~~~l~YTg~~~~~~~~~~~~~~q~q~lA~S~D~g---l~~w~K~~--pvi~~P--~~~~~~~fRDP~V-~ 185 (526)
T 3pij_A 114 SGSAVIDDNGDLRFYYTGHRWANGHDNTGGDWQVQMTALPDNDE---LTSATKQG--MIIDCP--TDKVDHHYRDPKV-W 185 (526)
T ss_dssp EEEEEECTTSCEEEEEEEEEETTSSSGGGCEEEEEEEEEESSTT---CSCEEEEE--EEECCC--GGGEEEEEEEEEE-E
T ss_pred eceEEEccCCEEEEEEecccCcccccCCCCceeEEEEEEECCCC---cceEEECC--ccccCC--CCccccccccCEE-E
Confidence 999998778899999999742 124899999999864 58999973 888766 4445679999996 6
Q ss_pred eCCCCeEEEEEeeec-CCccEEEEEEcCCCCCcEEcccccc-cCCCCCceecCceEEeccCCCCCccccCCCCCceeEEE
Q 010428 192 LGPDKRWRVIIGSKI-NRKGLAILYRSKDFVHWIKAKHPLH-SVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLK 269 (511)
Q Consensus 192 ~~~~g~w~m~~ga~~-~~~G~i~ly~S~Dl~~W~~~~~~l~-~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~ 269 (511)
+ ++|+|||++|++. +..|+|++|+|+||++|++.+.++. ....++||||||||+|+ |.. ++.||||+
T Consensus 186 ~-~~g~w~mv~ga~~~~~~G~i~ly~S~Dl~~W~~~g~l~~~~~~~g~mwECPdlf~l~--~~~--------g~~k~vL~ 254 (526)
T 3pij_A 186 K-TGDTWYMTFGVSSADKRGQMWLFSSKDMVRWEYERVLFQHPDPDVFMLECPDFSPIK--DKD--------GNEKWVIG 254 (526)
T ss_dssp E-ETTEEEEEEEEEETTSCEEEEEEEESSSSSCEEEEEEEECSCTTCCEEEEEEEEEEE--CTT--------SCEEEEEE
T ss_pred E-ECCEEEEEEEEecCCCCcEEEEEECCCCCcceEcCcccccCCCccCeEECCEEEEEC--CCC--------CceeEEEE
Confidence 6 6899999999875 5689999999999999999886333 33456799999999998 311 24599999
Q ss_pred EeeCC----------CceeEEEEEEEeCCCCeeecCCCCcCCCCccccccCC-CccceeeecCCCCcEEEEEeccCCCCC
Q 010428 270 VSLDD----------TKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSV 338 (511)
Q Consensus 270 ~S~~~----------~~~~~Y~iG~~d~~~~~F~p~~~~~d~~~~~~lD~G~-fYA~qtf~d~~~grril~gW~~~~~~~ 338 (511)
+|..+ .+.++|++|+||. +.+|+|+.. ++++|+|+ |||+|||. + +||||+||||++++..
T Consensus 255 ~s~~g~~~~~~~~~~~~~~~Y~vG~~d~-~~~f~~~~~------~~~lD~G~dfYA~qtf~-~-~gRri~~gW~~~~~~~ 325 (526)
T 3pij_A 255 FSAMGSKPSGFMNRNVSNAGYMIGTWEP-GGEFKPETE------FRLWDCGHNYYAPQSFN-V-DGRQIVYGWMSPFVQP 325 (526)
T ss_dssp EEEESCCCBTTBSCSSSEEEEEEEEECT-TSCEEESSC------CEESCCSSSCEEEEEEE-E-TTEEEEEEEECCCSSC
T ss_pred EeccccCCCccccccccceeEEEEEEcC-CCcEEECCc------ceeeeeCCCccccceeC-C-CCCEEEEEecCCCccc
Confidence 88532 3468999999994 358998753 57899998 99999998 4 7999999999999987
Q ss_pred CCCCCCCCccccccceEEEEecCCCeEEecchHHHHHhhhcceeccceEecCCcEEEEcccccceeeeEEEEEEcccccc
Q 010428 339 NDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQADVEISFDVSDFKKA 418 (511)
Q Consensus 339 ~~~~~~gW~g~lslPReL~l~~~g~~L~q~Pv~el~~LR~~~~~~~~~~~~~~~~~~~~~~~~~~~die~~~~l~~~~~~ 418 (511)
.++.++||+|+|||||||+|+++| +|+|+||+||++||.+.+.+.+..+..+....+.. .+.+++|+++|++..
T Consensus 326 ~~~~~~gW~g~ltlPRel~l~~~g-~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~-~~~~~el~~~~~~~~---- 399 (526)
T 3pij_A 326 IPMEDDGWCGQLTLPREITLGDDG-DVVTAPVAEMEGLREDTLDHGSVTLDMDGEQIIAD-DAEAVEIEMTIDLAA---- 399 (526)
T ss_dssp CGGGGGTEECEECCCEEEEECTTS-SEEEEECGGGGGGBSCCEEEEEEEECSSEEEEEES-CCSSEEEEEEEETTT----
T ss_pred CCCCCCCccceEEeCEEEEEEeCC-cEEEeecHHHHHhhhCcccccceEeccCCceEecC-CCcEEEEEEEEEECC----
Confidence 777889999999999999999777 59999999999999988877777775554433332 356677777776531
Q ss_pred cccCCCccCccccccccCCcccCCcccceeEEeecCCCceeeEEEEEEEeCCCCcEEEEEecCCCCccCc
Q 010428 419 EKLDPGWTNPQLLCSQKGASVKGALGPFGLLALASKDLKEYTAVFFRIFKGEDNKFVVLMCSDQSRSLQF 488 (511)
Q Consensus 419 e~~~~~~~~~~~~~~~~~~~~~~~~g~~Gl~v~~s~~~~E~t~i~f~~~~~~~~~~~~~~~~d~~~Ss~~ 488 (511)
+..++||+.++++.+. |.|.|+|+... + . +++||++|+..
T Consensus 400 ----------------------~~~~~~gl~l~~~~~~-e~t~i~yd~~~----~-~--l~~DR~~s~~~ 439 (526)
T 3pij_A 400 ----------------------STAERAGLKIHATEDG-AYTYVAYDGQI----G-R--VVVDRQAMANG 439 (526)
T ss_dssp ----------------------CCCSEEEEEEEECTTS-CCEEEEEETTT----T-E--EEEECTTCSSS
T ss_pred ----------------------CCcceEEEEEEECCCC-cEEEEEEEeCC----C-E--EEEECCCCCCC
Confidence 1124799999988876 89999998542 2 1 56799999875
|
| >3sc7_X Inulinase; glycoside hydrolase family 32, glycosylation cytosol, hydrolase; HET: MAN NAG EPE; 1.50A {Aspergillus ficuum} PDB: 3rwk_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-88 Score=730.40 Aligned_cols=384 Identities=24% Similarity=0.486 Sum_probs=306.5
Q ss_pred CCCCCCCCccccccCCCCCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCccCCCe
Q 010428 39 TSPNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGC 118 (511)
Q Consensus 39 ~~~~~~~Rp~yHf~p~~gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D~~g~ 118 (511)
...+++|||+|||+||.||||||||++|++|+|||||||||+++.||+|+||||+|+|||||+++|+|| | |.+||
T Consensus 22 ~~~~~~~Rp~yH~~P~~gwmNDPNG~~y~~G~YHlFYQ~~P~~~~wg~~~WgHa~S~DLvhW~~~~~aL-~----d~~g~ 96 (516)
T 3sc7_X 22 QAQSNDYRPSYHFTPDQYWMNEPNGLIKIGSTWHLFFQHNPTANVWGNICWGHATSTDLMHWAHKPTAI-A----DENGV 96 (516)
T ss_dssp --CCSTTCCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEETTCSTTCCCEEEEEEESSSSSCEEEEEEE-C----CBTTE
T ss_pred hhcCCCccccEeecCCcCCcCCCeeeEEECCEEEEEEeCCCCCCccCCCEEEEEEeCCCCcceecCccc-c----CCCCc
Confidence 456788999999999999999999999999999999999999999999999999999999999999999 4 34666
Q ss_pred --EeeeEEEcCCC----------ceEEEEeccCC-CCcceEEEEEecCCCCcccceeeecCCCceecCCC--CCcC-CCC
Q 010428 119 --WSGSATILPGE----------KPAIFYTGIDP-HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDA--MNQI-NTS 182 (511)
Q Consensus 119 --~SGsav~~~dg----------~~~l~YTg~~~-~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~--~~~~-~~~ 182 (511)
|||||++++++ .++|||||+.. .+.|.|++|+|+|.+ ++|+|+++||||.++. +.++ ...
T Consensus 97 ~~~SGSav~~~~~~~g~~~~~~~~l~l~YTg~~~~~~~q~q~lA~s~D~g----~~w~k~~~nPVi~~~~~~~~~~~~~~ 172 (516)
T 3sc7_X 97 EAFTGTAYYDPNNTSGLGDSANPPYLAWFTGYTTSSQTQDQRLAFSVDNG----ATWTKFQGNPIISTSQEAPHDITGGL 172 (516)
T ss_dssp EEEEEEEEECTTCTTSSSCSSSCCEEEEEEEEETTTTEEEEEEEEESSTT----SCCEECTTCCSBCHHHHTTTCTTSSS
T ss_pred eeEeceEEEeCCcccccccCCCCeEEEEEeeeeCCCCceEEEEEEecCCC----ceEEEcCCCceEcCCCcccccccCCC
Confidence 99999987553 48999999864 467999999999864 7999999999996431 0122 124
Q ss_pred CCCCCEEEEeCCCCeEEEEEeeecCCccEEEEEEcCCCCCcEEcccccccCC-----CCCceecCceEEeccCCCCCccc
Q 010428 183 SFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVK-----GTGMWECPDFFPVSTYGLNGLDT 257 (511)
Q Consensus 183 ~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~-----~~g~wECPdlf~l~~~g~~g~~~ 257 (511)
+||||+|+|.+++|+|||++|++ ..|+|++|+|+||++|++.+++..... .++||||||||+|+++|.
T Consensus 173 ~fRDPkV~~~~~~g~w~mv~g~~--~~~~i~ly~S~DL~~W~~~~~l~~~~~~g~~~~~~mwECPdlf~l~~~g~----- 245 (516)
T 3sc7_X 173 ESRDPKVFFHRQSGNWIMVLAHG--GQDKLSFWTSADTINWTWQSDLKSTSINGLSSDITGWEVPDMFELPVEGT----- 245 (516)
T ss_dssp SCEEEEEEEETTTTEEEEEEECB--TTCEEEEEEESSSSSCEEEEEEEGGGSTTCCTTCCCBCCCEEEEEECSSS-----
T ss_pred cccCCeEEEECCCCeEEEEEEEC--CCCEEEEEECCCCCCceEcccccccCCCCcccccceEECCcEEEecccCC-----
Confidence 79999987776689999999874 357899999999999999876443221 125999999999986541
Q ss_pred cCCCCCceeEEEEeeCC-----CceeEEEEEEEeCCCCeeecCCCCcCCCCccccccCC-Cccceeeec--CCCCcEEEE
Q 010428 258 SDMGPNTKHVLKVSLDD-----TKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFD--GAKNRRVLW 329 (511)
Q Consensus 258 s~~~~~~k~vL~~S~~~-----~~~~~Y~iG~~d~~~~~F~p~~~~~d~~~~~~lD~G~-fYA~qtf~d--~~~grril~ 329 (511)
.+.||||++|.+. ...++|++|+||+. +|+++.... ..+++|+|+ |||+|||.+ ..+||||+|
T Consensus 246 ----~~~k~VL~~s~~~~~~~~~~~~~Y~vG~~d~~--~f~~~~~~~---~~~~lD~G~DfYA~qtf~~~~~~~gRri~w 316 (516)
T 3sc7_X 246 ----EETTWVVMMTPAEGSPAGGNGVLAITGSFDGK--SFTADPVDA---STMWLDNGRDFDGALSWVNVPASDGRRIIA 316 (516)
T ss_dssp ----SCEEEEEEECCSSCCTTSSSCCEEEEEEECSS--CEEECCCCT---TTSBSCSSSSCEEEEECBSCCTTTCCCEEE
T ss_pred ----CCceEEEEECCCCCCCCCCCceEEEEEEccCC--eeEeCCCCc---cceeEEcCCCccccccccCCcCCCCCEEEE
Confidence 2359999999853 24679999999975 687764211 246899999 999999974 347999999
Q ss_pred EeccCCCCCCCCCCCCCccccccceEEEEec-CC-CeEEecchHHHHHhhhcceeccceEecCCcEEEEcccccceeeeE
Q 010428 330 GWVNESSSVNDDVKKGWAGIQAIPRKLWLDK-SG-KHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQADVE 407 (511)
Q Consensus 330 gW~~~~~~~~~~~~~gW~g~lslPReL~l~~-~g-~~L~q~Pv~el~~LR~~~~~~~~~~~~~~~~~~~~~~~~~~~die 407 (511)
+||++++... .++||+|+|||||||+|++ +| .+|+|+||+||++||.+...+.+..+..+..+ +.++.+.++||+
T Consensus 317 ~w~~~~~~~~--pt~gW~g~ltlPRel~l~~~~~~~~L~q~Pv~El~~Lr~~~~~~~~~~~~~~~~~-l~~~~~~~~el~ 393 (516)
T 3sc7_X 317 AVMNSYGSNP--PTTTWKGMLSFPRTLSLKKVGTQQHFVQQPITELDTISTSLQILANQTITPGQTL-LSSIRGTALDVR 393 (516)
T ss_dssp EEECCSTTCS--SCSSEECEECCCEEEEEEEETTEEEEEEEECGGGGGGEEEEEEEEEEEECTTCCB-STTCCCSSEEEE
T ss_pred EECCCccCCC--CCCCcccccccCEEEEEEecCCceEEEeCCHHHHHhhhccceeecceEecCCceE-ccCCCceEEEEE
Confidence 9998876533 3579999999999999985 33 47999999999999998776666666655433 455667788888
Q ss_pred EEEEEcccccccccCCCccCccccccccCCcccCCcccceeEEeecCCCceeeEEEEEEEeCCCCcEEEEEecCCCCccC
Q 010428 408 ISFDVSDFKKAEKLDPGWTNPQLLCSQKGASVKGALGPFGLLALASKDLKEYTAVFFRIFKGEDNKFVVLMCSDQSRSLQ 487 (511)
Q Consensus 408 ~~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~g~~Gl~v~~s~~~~E~t~i~f~~~~~~~~~~~~~~~~d~~~Ss~ 487 (511)
++|+... ..+|||.++++. +|+|.|+|+..+.+ +++||++|+.
T Consensus 394 ~~~~~~~----------------------------~~~fgl~l~~~~--~e~t~i~~d~~~~~-------l~~DR~~sg~ 436 (516)
T 3sc7_X 394 VAFYPDA----------------------------GSVLSLAVRKGA--SEQTVIKYTQSDAT-------LSVDRTESGD 436 (516)
T ss_dssp EEEEECT----------------------------TCEEEEEEEECS--SCCEEEEEETTTTE-------EEEECTTSSC
T ss_pred EEEEcCC----------------------------CCEEEEEEecCC--CcEEEEEEEccCCE-------EEEecCCCCC
Confidence 8776521 025999998876 78999999876432 7889999864
|
| >1y4w_A EXO-inulinase; glycoside hydrolase FAMI crystallographic structure, native structure, hydrolase; HET: NAG; 1.55A {Aspergillus awamori} SCOP: b.29.1.19 b.67.2.3 PDB: 1y9g_A* 1y9m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-87 Score=730.32 Aligned_cols=392 Identities=28% Similarity=0.491 Sum_probs=315.6
Q ss_pred CCCCCCccccccCCCCCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCC----CCCCCccCC
Q 010428 41 PNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAI----YPSQQSDIN 116 (511)
Q Consensus 41 ~~~~~Rp~yHf~p~~gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL----~P~~~~D~~ 116 (511)
.+++|||+|||+|+.||||||||++|++|+|||||||+|+++.||+|+||||+|+|||||+++|+|| .|+ +|..
T Consensus 3 ~~~~~Rp~~H~~P~~gw~NDPnG~~~~~G~yHlfyQ~~P~~~~wg~~~WgHa~S~Dlv~W~~~~~al~~~g~P~--~d~~ 80 (518)
T 1y4w_A 3 YDQPYRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDLTHWEEKPVALLARGFGS--DVTE 80 (518)
T ss_dssp CCCTTCCSSSCCCSSEEEEEEEEEEEETTEEEEEEEECTTCSSSCSCEEEEEEESSSSSCEEEEEEECCBTTTS--CCCB
T ss_pred CCCCccccEeeeCCcCceECCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCccEEECCceEecCCCCC--CCCC
Confidence 4678999999999999999999999999999999999999999999999999999999999999999 776 5778
Q ss_pred CeEeeeEEEcCCC----------ceEEEEeccCCC------------CcceEEEEEecCCCCcccceeeec-CCCceecC
Q 010428 117 GCWSGSATILPGE----------KPAIFYTGIDPH------------NRQVQNLAVPKNLSDPYLREWVKS-PKNPLMAP 173 (511)
Q Consensus 117 g~~SGsav~~~dg----------~~~l~YTg~~~~------------~~q~q~lA~s~d~~d~~l~~w~K~-~~nPVi~~ 173 (511)
|||||||+++.+| +++|||||+... +.|.||+|+|+|++ ++|+|+ +.||||.+
T Consensus 81 g~~SGsav~~~~~~~g~~~~~~~~~~l~YTg~~~~~~~~~~~~~~~~~~q~q~lA~s~D~g----~~w~k~~~~~pvi~~ 156 (518)
T 1y4w_A 81 MYFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQTVQEDQQSQSIAYSLDDG----LTWTTYDAANPVIPN 156 (518)
T ss_dssp EEEEEEEEECTTCTTSCCCSSSCCEEEEEEEEESSCEECTTSCEECTTEEEEEEEEESSTT----SSCEECTTTCCSBCS
T ss_pred ceEeeeEEEcCCCccccccCCCccEEEEEeeeeccccccccccccccceeEEEEEEEcCCC----ceEEEcCCCCCeEec
Confidence 9999999987554 899999998532 25899999999853 799998 78999976
Q ss_pred CCCCc--CCCCCCCCCEEEEeCCCCeEEEE--EeeecCCccEEEEEEcCCCCCcEEcccccccCCCCCceecCceEEecc
Q 010428 174 DAMNQ--INTSSFRDPTTAWLGPDKRWRVI--IGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVST 249 (511)
Q Consensus 174 p~~~~--~~~~~fRDP~vvw~~~~g~w~m~--~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~g~wECPdlf~l~~ 249 (511)
+. .+ ....+||||+|+|.+++|+|||+ +|++ ..|++|+|+||++|++.+.+......++||||||||+|.+
T Consensus 157 ~~-~~y~~~~~~fRDP~V~~~~~~g~w~mv~~~g~~----~~i~ly~S~DL~~W~~~~~~~~~~~~~~mwECPdlf~l~~ 231 (518)
T 1y4w_A 157 PP-SPYEAEYQNFRDPFVFWHDESQKWVVVTSIAEL----HKLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPL 231 (518)
T ss_dssp CC-TTCGGGTTSEEEEEEEEETTTTEEEEEEEEGGG----TEEEEEEESSSSSCEEEEEECCCSCCSSEEEEEEEEEEEB
T ss_pred CC-cccccCCCCcCCCcEeEECCCCcEEEEEEecCC----CeEEEEECCCCCCCeECccccccCCCCCeEECCeEEEeec
Confidence 51 21 24689999998777568999999 6653 2599999999999999876554344578999999999964
Q ss_pred CCCCCccccCCCCCceeEEEEeeCC-------CceeEEEEEEEeCCCCeeecCCCCc--CCCCccccccCC-Cccceeee
Q 010428 250 YGLNGLDTSDMGPNTKHVLKVSLDD-------TKHEYYTVGTYSTAKDRYVPDEGSV--ESDSGLRFDYGK-YYASKTFF 319 (511)
Q Consensus 250 ~g~~g~~~s~~~~~~k~vL~~S~~~-------~~~~~Y~iG~~d~~~~~F~p~~~~~--d~~~~~~lD~G~-fYA~qtf~ 319 (511)
+|. .+.||||++|.++ ...++|++|+||+. +|+|+.... +...+.++|+|+ |||+|||.
T Consensus 232 ~g~---------~~~k~vL~~s~~~~~~~~~~~~~~~Y~vG~~d~~--~f~~~~~~~~~~~~~~~~lD~G~dfYA~qtf~ 300 (518)
T 1y4w_A 232 DSG---------NSTKWVITSGLNPGGPPGTVGSGTQYFVGEFDGT--TFTPDADTVYPGNSTANWMDWGPDFYAAAGYN 300 (518)
T ss_dssp TTS---------SCEEEEEEEEEESCCSTTCCSCEEEEEEEEECSS--CEEECTTTSCSSSSCCEESCSSSSCEEEEECB
T ss_pred CCC---------CceeEEEEeccCCCCccccccCCcEEEEEEeeCC--EEEeCCcccccccccceEEccCCCCccccccc
Confidence 341 2359999999754 34789999999974 799875221 112367999998 99999999
Q ss_pred cCCCCcEEEEEeccCCCCCCCCCCCCCccccccceEEEEec-CC-CeEEecchHHHHHhhhcceeccceEecCCcEEEEc
Q 010428 320 DGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDK-SG-KHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVT 397 (511)
Q Consensus 320 d~~~grril~gW~~~~~~~~~~~~~gW~g~lslPReL~l~~-~g-~~L~q~Pv~el~~LR~~~~~~~~~~~~~~~~~~~~ 397 (511)
|.++||||+||||++|++......+||+|+|||||||+|++ +| .+|+|+||+||++||.+.+.+.+..+..++...+.
T Consensus 301 d~~~gRri~~gWm~~~~~~~~~pt~gW~g~ltlPRel~l~~~~g~~~L~q~Pv~el~~lr~~~~~~~~~~~~~~~~~~~~ 380 (518)
T 1y4w_A 301 GLSLNDHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLVQQPQEAWSSISNKRPIYSRTFKTLSEGSTNT 380 (518)
T ss_dssp SCCGGGCEEEEECSCTTTGGGCCCSSEECCBCCCEEEEEEEETTEEEEEEEECSCGGGTBCSSCSEEEEEEEECSEECCC
T ss_pred cCCCCCEEEEEecCCCccccccCCCCcCcccccCeEEEEEecCCcCeEEEeehHHHHhhhccceeccceeeccccceeec
Confidence 85589999999999998755445689999999999999985 33 47999999999999998766655555544444444
Q ss_pred ccccceeeeEEEEEEcccccccccCCCccCccccccccCCcccCCcccceeEEeecCCCceeeEEEEEEEeCCCCcEEEE
Q 010428 398 GVTAAQADVEISFDVSDFKKAEKLDPGWTNPQLLCSQKGASVKGALGPFGLLALASKDLKEYTAVFFRIFKGEDNKFVVL 477 (511)
Q Consensus 398 ~~~~~~~die~~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~g~~Gl~v~~s~~~~E~t~i~f~~~~~~~~~~~~~ 477 (511)
+..+.+++|+++|+.. ...++||+.++++.+++|.|.|+|+..+.+
T Consensus 381 ~~~~~~~el~~~~~~~---------------------------~~~~~~gl~l~~~~~~~e~~~i~~~~~~~~------- 426 (518)
T 1y4w_A 381 TTTGETFKVDLSFSAK---------------------------SKASTFAIALRASANFTEQTLVGYDFAKQQ------- 426 (518)
T ss_dssp EECCSSEEEEEEEETT---------------------------CSSSEEEEEEEECTTSSSCEEEEEETTTTE-------
T ss_pred CCCCeEEEEEEEEecC---------------------------CCCccEEEEEEcCCCCceeEEEEEEecCCE-------
Confidence 5555667776665410 012479999999998899999999865332
Q ss_pred EecCCCCccCc
Q 010428 478 MCSDQSRSLQF 488 (511)
Q Consensus 478 ~~~d~~~Ss~~ 488 (511)
||+||++|+..
T Consensus 427 l~~dr~~s~~~ 437 (518)
T 1y4w_A 427 IFLDRTHSGDV 437 (518)
T ss_dssp EEEECTTSSCC
T ss_pred EEEecCCCCCC
Confidence 78999999863
|
| >3kf3_A Invertase; GH32, glycoprotein, glycosidase, hydrolase; HET: FRU NAG; 1.90A {Schwanniomyces occidentalis} PDB: 3kf5_A* 3u75_A* 3u14_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-87 Score=717.72 Aligned_cols=384 Identities=23% Similarity=0.418 Sum_probs=308.5
Q ss_pred CCCCCccccccCCCCCccCCcceEEE--CCEEEEEeeeCCCCCCCCC-cEEEEEEeCCCCcceecCCCCCCCCCccCCCe
Q 010428 42 NQPYRTGYHFQPPKNWINDPNGVMIY--KGIYHLFYQYNPKGAVWGN-IVWAHSTSKDLINWIPHDPAIYPSQQSDINGC 118 (511)
Q Consensus 42 ~~~~Rp~yHf~p~~gw~NDPnG~~~~--~G~YHLFYQ~~P~~~~~g~-~~WgHa~S~DLvhW~~~~~aL~P~~~~D~~g~ 118 (511)
.+.|||+|||+||.||||||||++|+ +|+|||||||||+++.||+ |+||||+|+|||||+++|+||.|+. |.+||
T Consensus 6 ~~~~Rp~~H~~P~~gwmNDPNG~~y~~~~G~YHlFYQ~nP~~~~wg~~~~WGHa~S~DLvhW~~~~~aL~P~~--d~~G~ 83 (509)
T 3kf3_A 6 SEYNRPLIHFTPEKGWMNDPNGLFYDKTAKLWHLYFQYNPNATAWGQPLYWGHATSNDLVHWDEHEIAIGPEH--DNEGI 83 (509)
T ss_dssp HHHHSCSSSCCCSSEEEEEEEEEEEETTTTEEEEEEEEETTCSSCCSSBEEEEEEESSSSSCEECSCCBCCSS--TTCEE
T ss_pred cccccccEeecCCcCCeeCCcceEEeCCCCEEEEEEecCCCCCCCCCcCEEEEEEccCCCCcEECcccccccc--cCCCE
Confidence 45789999999999999999999998 5999999999999999994 9999999999999999999999986 78999
Q ss_pred EeeeEEEcCC-------------CceEEEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCC
Q 010428 119 WSGSATILPG-------------EKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFR 185 (511)
Q Consensus 119 ~SGsav~~~d-------------g~~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fR 185 (511)
|||||+++.+ |+++|+|||+. ...|.|++|+|.|++ .+|+|++.||||..+ ..+||
T Consensus 84 ~SGSav~d~~~t~g~~~~~~~p~~~l~~~YTg~~-~~~q~q~lA~S~D~g----~~~~k~~~nPVi~~~------~~~fR 152 (509)
T 3kf3_A 84 FSGSIVVDHNNTSGFFNSSIDPNQRIVAIYTNNI-PDNQTQDIAFSLDGG----YTFTKYENNPVIDVS------SNQFR 152 (509)
T ss_dssp EEEEEEECTTCTTSCCCTTSCGGGCEEEEEEEEE-TTEEEEEEEEESSSS----SSCEECTTCCSBCCS------CSSCE
T ss_pred EeceEEEeCCccccccccccCCCCceEEEECCCC-CCCeeEEEEEECCCC----cceEEcCCCceEcCC------CCccc
Confidence 9999998533 57999999975 357999999999864 699999899999532 36899
Q ss_pred CCEEEEeCCCCeEEEEEeeecCCccEEEEEEcCCCCCcEEcccccccCCCCCceecCceEEeccCCCCCccccCCCCCce
Q 010428 186 DPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTK 265 (511)
Q Consensus 186 DP~vvw~~~~g~w~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k 265 (511)
||+|+|.+++|+|+|++|++ ..|+|++|+|+||++|++.+.+.. ...++||||||||+|+.+| +.+.|
T Consensus 153 DPkVfw~~~~g~w~Mv~g~~--~~g~i~ly~S~DL~~W~~~~~~~~-~~~G~mwECPdlf~l~~~~---------~~~~k 220 (509)
T 3kf3_A 153 DPKVFWHEDSNQWIMVVSKS--QEYKIQIFGSANLKNWVLNSNFSS-GYYGNQYECPGLIEVPIEN---------SDKSK 220 (509)
T ss_dssp EEEEEEETTTTEEEEEEEEG--GGTEEEEEEESSSSSCEEEEEECC-BCCCSCEEEEEEEEEEBTT---------SSCEE
T ss_pred CCeEEEECCCCEEEEEEEEC--CCCEEEEEECCCCCCceEcccccc-CCccceeECCeEEEECccC---------CCCce
Confidence 99988886789999999874 358899999999999999887655 4445699999999998544 23469
Q ss_pred eEEEEeeCC-----CceeEEEEEEEeCCCCeeecCCCCcCCCCccccccCC-CccceeeecCCCCcEEEEEeccCCCCCC
Q 010428 266 HVLKVSLDD-----TKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSVN 339 (511)
Q Consensus 266 ~vL~~S~~~-----~~~~~Y~iG~~d~~~~~F~p~~~~~d~~~~~~lD~G~-fYA~qtf~d~~~grril~gW~~~~~~~~ 339 (511)
|||++|.++ ...++|+||+||+ .+|+|+... ..+||+|+ |||+|||.+ ++||||+||||++|++..
T Consensus 221 ~vL~~s~~~~~p~g~~~~~Y~vG~~d~--~~f~~~~~~-----~~~lD~G~DfYA~qtf~~-~~grri~igWm~~~~~~~ 292 (509)
T 3kf3_A 221 WVMFLAINPGSPLGGSINQYFVGDFDG--FQFVPDDSQ-----TRFVDIGKDFYAFQTFSE-VEHGVLGLAWASNWQYAD 292 (509)
T ss_dssp EEEEEEECSCCTTSSCEEEEEEEEECS--SCEEESSCB-----CEESCCSSSCEEEEECBS-CSSSEEEEEECSCTTTTT
T ss_pred EEEEEccCCCCCCCCCceEEEEEEEeC--CEEEecCcc-----ceeeccCCcceeeceeeC-CCCCEEEEEecCCccccc
Confidence 999998653 3568999999996 479987632 46899999 999999954 589999999999998766
Q ss_pred CCCCCCCccccccceEEEEecC--C-----CeEEecchH-HHHHhhhcceeccceEecCCcEEEEc--ccccceeeeEEE
Q 010428 340 DDVKKGWAGIQAIPRKLWLDKS--G-----KHLVQWPVV-EIEKLRVNQVQVPSKLLKGGSVIEVT--GVTAAQADVEIS 409 (511)
Q Consensus 340 ~~~~~gW~g~lslPReL~l~~~--g-----~~L~q~Pv~-el~~LR~~~~~~~~~~~~~~~~~~~~--~~~~~~~die~~ 409 (511)
...++||+|+|||||||+|++. | .+|+|+||+ ||++||.+.+ +.+..+.++..+.+. +.. .++||+++
T Consensus 293 ~~p~~~W~g~~tlPRel~l~~~~~~~~~~~~~L~q~Pv~~el~~lr~~~~-~~~~~~~~~~~~~~~~~~~~-~~~el~~~ 370 (509)
T 3kf3_A 293 QVPTNPWRSSTSLARNYTLRYVHTNAETKQLTLIQNPVLPDSINVVDKLK-KKNVKLTNKKPIKTNFKGST-GLFDFNIT 370 (509)
T ss_dssp TSSCCSEECCBCCCEEEEEEEEESSSSCEEEEEEEEECCCTTSEEEEEEE-EEEEECCTTSCEECCCSCCC-SEEEEEEE
T ss_pred CCCCCCcccccccCEEEEEEecccCCCCCccEEEEEEcHHHHHHhhCcce-ecceEecCCceeEEecCCCC-ceEEEEEE
Confidence 5667899999999999999861 1 279999999 9999996554 666677666655443 222 25777776
Q ss_pred EEEcccccccccCCCccCccccccccCCcccCCcccceeEEeecCCCceeeEEEEEEEeCCCCcEEEEEecCCCCccC
Q 010428 410 FDVSDFKKAEKLDPGWTNPQLLCSQKGASVKGALGPFGLLALASKDLKEYTAVFFRIFKGEDNKFVVLMCSDQSRSLQ 487 (511)
Q Consensus 410 ~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~g~~Gl~v~~s~~~~E~t~i~f~~~~~~~~~~~~~~~~d~~~Ss~ 487 (511)
|++...+ .+. .+....|+|.++.+.+..|.|.|.|+... + + +.+||++|..
T Consensus 371 ~~~~~~~---~~~-----------------~~~~~~~~l~l~~~~~~~e~~~i~yd~~~----~-~--l~~DR~~sg~ 421 (509)
T 3kf3_A 371 FKVLNLN---VSP-----------------GKTHFDILINSQELNSSVDSIKIGFDSSQ----S-S--FYIDRHIPNV 421 (509)
T ss_dssp EEECSCC---CCG-----------------GGSEEEEEEEECCSSSCCCEEEEEEETTT----T-E--EEEECCCTTC
T ss_pred Eeccccc---ccc-----------------cccceeEEEEEEecCCCCcEEEEEEECCC----C-E--EEEECCCCCC
Confidence 6653210 000 01112477777667777899999997542 2 1 5669999875
|
| >4ffh_A Levan fructotransferase; glycoside hydrolase; HET: SUC; 2.20A {Arthrobacter ureafaciens} PDB: 4ffi_A* 4ffg_A* 4fff_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-84 Score=695.14 Aligned_cols=370 Identities=21% Similarity=0.383 Sum_probs=294.5
Q ss_pred CccccccCCCCCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCccCCCeEeeeEEE
Q 010428 46 RTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATI 125 (511)
Q Consensus 46 Rp~yHf~p~~gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D~~g~~SGsav~ 125 (511)
.|+|||+||.||||||||++|++|+|||||||+|+++.||+ ||||+|+|||||+++|+||.|++ ..|||||||++
T Consensus 1 ~P~~H~~p~~gwmNDPNG~~y~~G~YHlFYQ~~P~~~~~g~--WgHa~S~DLvhW~~~~~aL~P~~---~~g~~SGSav~ 75 (492)
T 4ffh_A 1 MAVYHMTPPSGWLCNPQRPVTTHGAYQLYYLHSDQNNGPGG--WDHASTTDGVAFTHHGTVMPLRP---DFPVWSGSAVV 75 (492)
T ss_dssp -CCSSCCCSSEEEEEEEEEEEETTEEEEEEEEESSTTCCCE--EEEEEESSSSSCEEEEEEECCBT---TBCCCCEEEEE
T ss_pred CCcEeEcCCCCCeeCCeeeEEECCEEEEEEECCCCCCCCCc--EEEEEeCCCCccEECCCCCCCCC---CCCEEeceEEE
Confidence 48999999999999999999999999999999999999998 99999999999999999999975 58999999998
Q ss_pred cCCCc-------eEEEEeccCC--CCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCC---------CCCC
Q 010428 126 LPGEK-------PAIFYTGIDP--HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSS---------FRDP 187 (511)
Q Consensus 126 ~~dg~-------~~l~YTg~~~--~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~---------fRDP 187 (511)
+++|+ ++|||||+.. .+.|.||+|+|+|++ ++|+|+ +||||.+| ....... ||||
T Consensus 76 ~~~~~~g~~~~~~~l~YTg~~~~~~~~q~q~lA~S~D~g----~~w~k~-~nPvi~~p--~~~~~~~~~~~~~~~~fRDP 148 (492)
T 4ffh_A 76 DTANTAGFGAGAVVALATQPTDGVRKYQEQYLYWSTDGG----FTFTAL-PDPVIVNT--DGRAATTPAEIENAEWFRDP 148 (492)
T ss_dssp ETTCSSSSCTTEEEEEEEEEGGGCGGGEEEEEEEESSSS----SSCEEC-SSCSBCCT--TTTTCCSHHHHHHHTCEEEE
T ss_pred eCCCccccCCCcEEEEEeecccCCCCcEEEEEEEeCCCC----ceEEEc-CccccCCC--CccccccccccccCCCCcCC
Confidence 76665 9999999864 367999999999853 799999 89999765 3211111 9999
Q ss_pred EEEEeCCCCeEEEEEeeecCCccEEEEEEcCCCCCcEEcccccccCCCCCceecCceEEeccCCCCCccccCCCCCceeE
Q 010428 188 TTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHV 267 (511)
Q Consensus 188 ~vvw~~~~g~w~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~v 267 (511)
+|+|.+++|+|||++ ++ .++|++|+|+||++|++.+.+......++||||||||+|+.++ ++.|||
T Consensus 149 ~V~~~~~~g~w~mv~-a~---~~~i~ly~S~DL~~W~~~~~~~~~~~~g~mwECPdlf~l~~~~----------~~~k~v 214 (492)
T 4ffh_A 149 KIHWDTARGEWVCVI-GR---LRYAAFYTSPNLRDWTLRRNFDYPNHALGGIECPDLFEITADD----------GTRHWV 214 (492)
T ss_dssp EEEEETTTTEEEEEE-EE---TTEEEEEEESSSSSCEECCCEECSCGGGCCCEEEEEEEEECTT----------SCEEEE
T ss_pred EEEEECCCCEEEEEE-EC---CCeEEEEECCCCCCceEeccccccCCccceEECCeEEEECCCC----------CCceEE
Confidence 987765689999999 44 3689999999999999998765543456799999999998432 245999
Q ss_pred EEEeeCC-----CceeEEEEEEEeCCCCeeecCCCCcCCCCccccccCC-Cccceeee--cCCCCcEEEEEeccCCCCC-
Q 010428 268 LKVSLDD-----TKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFF--DGAKNRRVLWGWVNESSSV- 338 (511)
Q Consensus 268 L~~S~~~-----~~~~~Y~iG~~d~~~~~F~p~~~~~d~~~~~~lD~G~-fYA~qtf~--d~~~grril~gW~~~~~~~- 338 (511)
|++|.++ ...++|++|+||+ .+|+|+.. .+.++|+|+ |||+|||. |.++||||+||||++|++.
T Consensus 215 L~~s~~~~~~~~~~~~~Y~vG~~d~--~~f~~~~~-----~~~~lD~G~dfYA~qtf~~~~~~~grri~~gW~~~~~~~~ 287 (492)
T 4ffh_A 215 LAASMDAYGIGLPMTYAYWTGTWDG--EQFHADDL-----TPQWLDWGWDWYAAVTWPSIDAPETKRLAIAWMNNWKYAA 287 (492)
T ss_dssp EEEECCCGGGTCCSSEEEEEEEECS--SCEEESCS-----SCEESCCSSCCEEEEEEECSSCTTTCEEEEEECCCTTTCS
T ss_pred EEEccCCCCCCCccceEEEEEEeeC--CEEEeCCC-----CccceeeCCCcccCCeEccCCCCCCCEEEEEecCCCcccc
Confidence 9999754 4568999999994 58998753 257999999 99999999 3458999999999999853
Q ss_pred --CCCC-CCCCccccccceEEEEec--CC-CeEEecchHHHHHhhhcceeccceEecCCcEEEEcccccceeeeEEEEEE
Q 010428 339 --NDDV-KKGWAGIQAIPRKLWLDK--SG-KHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQADVEISFDV 412 (511)
Q Consensus 339 --~~~~-~~gW~g~lslPReL~l~~--~g-~~L~q~Pv~el~~LR~~~~~~~~~~~~~~~~~~~~~~~~~~~die~~~~l 412 (511)
.++. ++||+|+|||||||+|++ +| .+|+|+||+||++||.+++.+.+..+..+.. + ...+..++|+++|+.
T Consensus 288 ~~~pt~~~~gW~g~~tlPRel~l~~~~~g~~~L~q~Pv~el~~lr~~~~~~~~~~~~~~~~--~-~~~~~~~el~~~~~~ 364 (492)
T 4ffh_A 288 RDVPTDASDGYNGQNSIVRELRLARQPGGWYTLLSTPVAALTNYVTATTTLPDRTVDGSAV--L-PWNGRAYEIELDIAW 364 (492)
T ss_dssp SCCHHHHHHSEECCBCCCEEEEEEECTTSCEEEEEEECGGGGGGEEEEEEECCEEESSEEE--C-SCCCSSEEEEEEEEE
T ss_pred ccCCcccccCcccccccCEEEEEEEcCCCeeEEEEeehHHHHHhhccceeecceeccCcee--e-cCCCceEEEEEEEcc
Confidence 3333 489999999999999995 33 3799999999999999888777766644322 2 223444566655433
Q ss_pred cccccccccCCCccCccccccccCCcccCCcccceeEEeecCCCceeeEEEEEEEeCCCCcEEEEEecCCCCccCc
Q 010428 413 SDFKKAEKLDPGWTNPQLLCSQKGASVKGALGPFGLLALASKDLKEYTAVFFRIFKGEDNKFVVLMCSDQSRSLQF 488 (511)
Q Consensus 413 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~g~~Gl~v~~s~~~~E~t~i~f~~~~~~~~~~~~~~~~d~~~Ss~~ 488 (511)
. ....||+.++.+.+ +.+.|.|+....+ +++||++|+..
T Consensus 365 ~----------------------------~~~~~gl~l~~~~~--~~~~i~yd~~~~~-------l~ldR~~sg~~ 403 (492)
T 4ffh_A 365 D----------------------------TATNVGISVGRSPD--GTRHTNIGKYGAD-------LYVDRGPSDLA 403 (492)
T ss_dssp S----------------------------SCSEEEEEEEECTT--SSCCEEEEEETTE-------EEEECGGGCCT
T ss_pred C----------------------------CccEEEEEEEECCC--CeEEEEEECcCCE-------EEEEccCCCCc
Confidence 1 01257888877765 3477888766332 56788888653
|
| >3lig_A Fructosyltransferase; five bladed beta-propeller fold, hydrolase; 1.80A {Aspergillus japonicus} PDB: 3ldk_A* 3lem_A* 3ldr_A 3lih_A* 3lf7_A 3lfi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-83 Score=701.98 Aligned_cols=400 Identities=19% Similarity=0.284 Sum_probs=307.5
Q ss_pred cccccCCCCCCCCCCccccccCCCCCccCCcceEE--ECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceec----CC
Q 010428 32 NLQTSQSTSPNQPYRTGYHFQPPKNWINDPNGVMI--YKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPH----DP 105 (511)
Q Consensus 32 ~~~~~~~~~~~~~~Rp~yHf~p~~gw~NDPnG~~~--~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~----~~ 105 (511)
+|.+.......++|||+|||+||.||||||||++| ++|+|||||||||. | ||||+|+|||||+++ ++
T Consensus 13 ~l~~~~~~~~~~~~Rp~~H~~p~~gwmNDPnG~~yD~~~G~YHlFYQ~~P~----g---WgHa~S~DLvhW~~~~~~~~~ 85 (634)
T 3lig_A 13 NLSTLPNNTLFHLWRPRAHILPAEGQIGDPCAHYTDPSTGLFHVGFLHDGD----G---IAGATTANLATYTDTSDNGSF 85 (634)
T ss_dssp CGGGSCTTTTTTTSCCSSSCCCSSEEEEEECCCEECTTTCCEEEEEEETTS----C---EEEEEESSSSCCEESCSTTCE
T ss_pred HHHHhhhcccccccCccEeEcCCCCcccCCccceEeCCCCEEEEEEecCCC----c---eeEEEecCcCceeECcCCCCc
Confidence 46666666778999999999999999999999999 99999999999994 4 999999999999999 89
Q ss_pred CCCCCCCccCCCeEeeeEEEc-CCCceEEEEeccCC----------CCcceEEEEEecCCCCcccceeeecCCCceecCC
Q 010428 106 AIYPSQQSDINGCWSGSATIL-PGEKPAIFYTGIDP----------HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPD 174 (511)
Q Consensus 106 aL~P~~~~D~~g~~SGsav~~-~dg~~~l~YTg~~~----------~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p 174 (511)
||.|+..||.+|||||||+++ .+|+++|||||+.+ .+.|.||+|+|+|. +++|+|++.||||..+
T Consensus 86 aL~P~~~~D~~G~~SGSav~~~~~g~~~~~YTg~~~~~~~~~~~~~~~~q~Q~lA~S~D~----g~~w~K~~~nPVi~~~ 161 (634)
T 3lig_A 86 LIQPGGKNDPVAVFDGAVIPVGVNNTPTLLYTSVSFLPIHWSIPYTRGSETQSLAVARDG----GRRFDKLDQGPVIADH 161 (634)
T ss_dssp EECSCSSSCSSEEEEEEEESSCGGGSCEEEEEEECSCCCCTTSCCCTTSEEEEEEEEEGG----GTEEEECSSSCSBCSS
T ss_pred eecCCCCCCCCCcEeeEEEEECCCCEEEEEEEecccccccccCcCCCCcEEEEEEEECCC----CCEEEECCCCceEcCC
Confidence 999999999999999999864 27899999999842 24689999999885 3899999999999643
Q ss_pred CCCcCCCCCCCCCEEEE----------------------------eCCCCeEEEEEeeec-CCccEEEEEE--cCC---C
Q 010428 175 AMNQINTSSFRDPTTAW----------------------------LGPDKRWRVIIGSKI-NRKGLAILYR--SKD---F 220 (511)
Q Consensus 175 ~~~~~~~~~fRDP~vvw----------------------------~~~~g~w~m~~ga~~-~~~G~i~ly~--S~D---l 220 (511)
+ +++...+||||||+| ..++|+|||++|++. +..|+|+||+ |+| |
T Consensus 162 p-~g~~~~~fRDPkV~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ymvlg~~~~~~~g~v~lY~~~s~dd~~l 240 (634)
T 3lig_A 162 P-FAVDVTAFRAPFVFRSARLDVLLSLDEEVARNETAVQQAVDGWTEKNAPWYVAVSGGVHGVGPAQFLYRQNGGNASEF 240 (634)
T ss_dssp S-TTCCEEEEEEEEEECCHHHHHHHHSCTTTTTSHHHHHHHHHTCCGGGCCCEEEEEEEETTTEEEEEEEEEGGGCTTCC
T ss_pred C-cccCCCccCCCeEccccCccccccccccccccccccccccccccCCCCeEEEEEEEecCCCCCEEEEEEeCCCCcccc
Confidence 1 566778999999755 114789999999987 5678999999 888 9
Q ss_pred CCcEEccccccc-------------CCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCC-----------Cc
Q 010428 221 VHWIKAKHPLHS-------------VKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD-----------TK 276 (511)
Q Consensus 221 ~~W~~~~~~l~~-------------~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~-----------~~ 276 (511)
.+|++.++++.. ...++||||||||+|+..|.. ....+|||++|.++ .+
T Consensus 241 ~~W~~~g~l~~~~~~~~~g~~~~~~~~~G~~wECPdlf~l~~~g~~-------~~~~~~vl~~~~~g~~~~~~~~~~~~~ 313 (634)
T 3lig_A 241 QYWEYLGEWWQEATNSSWGDEGTWAGRWGFNFETGNVLFLTEEGHD-------PQTGEVFVTLGTEGSGLPIVPQVSSIH 313 (634)
T ss_dssp SCEEEEEEEEECCTTCCSSSSSCSSCCCCSEEEEEEEEEECSSSBC-------TTTSEEEEEEEEEECCSSCCTTCCCEE
T ss_pred CCceEecccccccccccccccccccCceeeEEECCCEEEECCcccC-------CCCCcEEEEECCCCCCCcccccccccc
Confidence 999999865421 123569999999999943300 01248999998642 13
Q ss_pred eeEEEEEEE--eCC----CCeeecCCCCcCCCCccccccCC-CccceeeecCC----------C-CcEEEEEeccCCCCC
Q 010428 277 HEYYTVGTY--STA----KDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGA----------K-NRRVLWGWVNESSSV 338 (511)
Q Consensus 277 ~~~Y~iG~~--d~~----~~~F~p~~~~~d~~~~~~lD~G~-fYA~qtf~d~~----------~-grril~gW~~~~~~~ 338 (511)
...|++|+| |.+ +.+|.|+. .++||+|+ |||+|||.++. + ||||+||||++++..
T Consensus 314 ~~~y~~G~~~~d~~~~~~~~~f~~~~-------~~~lD~G~dfYA~qtf~~~~~~~~~~~~~~~~gRri~igWm~~~~~~ 386 (634)
T 3lig_A 314 DMLWAAGEVGVGSEQEGAKVEFSPSM-------AGFLDWGFSAYAAAGKVLPASSAVSKTSGVEVDRYVSFVWLTGDQYE 386 (634)
T ss_dssp EEEEEEEEEEECTTSSSCSEEEEEEE-------EEEEECCTTEEEEEEEEECTTSHHHHHHTCCSCEEEEEEEECSSTTT
T ss_pred ccEEEEEEEecCcccccCceeEecCC-------ccccccCcCceecceecccccccccccccCCCCCEEEEEeCCCCccc
Confidence 568999999 443 46788764 57899999 99999999873 2 999999999999864
Q ss_pred ----CCCCCCCCccccccceEEEEec-----CC----------------------CeEEecchHHH-HHhhhccee--cc
Q 010428 339 ----NDDVKKGWAGIQAIPRKLWLDK-----SG----------------------KHLVQWPVVEI-EKLRVNQVQ--VP 384 (511)
Q Consensus 339 ----~~~~~~gW~g~lslPReL~l~~-----~g----------------------~~L~q~Pv~el-~~LR~~~~~--~~ 384 (511)
.++.++||+|+|||||||+|++ +| .+|.|+||+|| ++||.+... ..
T Consensus 387 ~~~~~pt~~~gW~g~ltlPReL~l~~~~~v~~~~l~~~~~~s~~~~~~~~G~~t~~~L~q~Pv~El~~~Lr~~~~~~~~~ 466 (634)
T 3lig_A 387 QADGFPTAQQGWTGSLLLPRELKVQTVENVVDNELVREEGVSWVVGESDNQTATLRTLGITIARETKAALLANGSVTAEE 466 (634)
T ss_dssp TCSSCCHHHHSEECEECCCEEEEEEEEEEEECSHHHHCSSCSCEEEEECSSEEEEEEEEEEECHHHHHHHHHTCEEEEEC
T ss_pred ccccCCCCCCCCccccccCEEEEEEEecCccCccccccccccceeccccCCccccCEEEEeecHHHHHHhhccceeeccc
Confidence 3455789999999999999962 22 26999999999 889987642 23
Q ss_pred ceEecCCcEEEE-cccccceeeeEEEEEEcccccccccCCCccCccccccccCCcccCCcccceeEEeecCCCceeeEEE
Q 010428 385 SKLLKGGSVIEV-TGVTAAQADVEISFDVSDFKKAEKLDPGWTNPQLLCSQKGASVKGALGPFGLLALASKDLKEYTAVF 463 (511)
Q Consensus 385 ~~~~~~~~~~~~-~~~~~~~~die~~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~g~~Gl~v~~s~~~~E~t~i~ 463 (511)
+..+.....+.+ .+..+..++|+++|+.... .++....+||.++++. .|.|.|+
T Consensus 467 ~~~~~~~~~~~~~~~~~~~~~El~~~i~~~~~-----------------------~~~~a~~~Gl~L~~s~--~e~T~I~ 521 (634)
T 3lig_A 467 DRTLQTAAVVPFAQSPSSKFFVLTAQLEFPAS-----------------------ARSSPLQSGFEILASE--LERTAIY 521 (634)
T ss_dssp CEEECSEEEEECSSCCSSSEEEEEEEEECCGG-----------------------GTTSCCEEEEEEEESS--SCCEEEE
T ss_pred ceeccccceecccccCCCcEEEEEEEEecCCC-----------------------CcCcccEEEEEEEeCC--CcEEEEE
Confidence 334432222222 1244555666665543210 0111236899998875 4889999
Q ss_pred EEEEeCCCCcEEEEEecCCCCccCcc
Q 010428 464 FRIFKGEDNKFVVLMCSDQSRSLQFF 489 (511)
Q Consensus 464 f~~~~~~~~~~~~~~~~d~~~Ss~~~ 489 (511)
|+..... |.+||++|+...
T Consensus 522 Yd~~~~~-------l~vDRs~Sg~~~ 540 (634)
T 3lig_A 522 YQFSNES-------LVVDRSQTSAAA 540 (634)
T ss_dssp EETTTTE-------EEEECTTSCTTT
T ss_pred EECCCCE-------EEEECCCCCCcc
Confidence 9854221 667999998763
|
| >1w2t_A Beta fructosidase; hydrolase, glycosidase, invertase, raffinose; HET: SUC GLA CIT; 1.87A {Thermotoga maritima} SCOP: b.29.1.19 b.67.2.3 PDB: 1uyp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-80 Score=656.87 Aligned_cols=395 Identities=27% Similarity=0.500 Sum_probs=309.8
Q ss_pred CCCccccccCCCCCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCccCCCeEeeeE
Q 010428 44 PYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSA 123 (511)
Q Consensus 44 ~~Rp~yHf~p~~gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D~~g~~SGsa 123 (511)
.|||+|||+||.||||||||++|++|+|||||||+|.++.||+++||||+|+||+||+++++||.|+.. .+|||||||
T Consensus 1 ~~Rp~~H~~p~~gw~nDPng~~~~~G~yhlfyq~~p~~~~~g~~~wgha~S~Dlv~W~~~~~aL~p~~~--~~g~~sgsa 78 (432)
T 1w2t_A 1 LFKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPVALYPDDE--THGVFSGSA 78 (432)
T ss_dssp CCSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEETTSSSCCSCEEEEEEESSSSSCEEEEEEECCSST--TEEEEEEEE
T ss_pred CCCcCCcccCCCCCeECCCcCeEECCEEEEEEecCCCCCCCCCcEEEEEEcCCCcCeEECCccCCCCCC--CCCEEeeEE
Confidence 489999999999999999999999999999999999999999999999999999999999999999876 679999999
Q ss_pred EEcCCCceEEEEeccCC-----CCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeE
Q 010428 124 TILPGEKPAIFYTGIDP-----HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRW 198 (511)
Q Consensus 124 v~~~dg~~~l~YTg~~~-----~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w 198 (511)
++ .+|+++|+|||+.. .+.+.|++|+|+|+ .+|+|++.||||..+ ++....+||||+ ||+ ++|+|
T Consensus 79 v~-~~g~~~l~YTg~~~~~~~~~~~~~q~lA~S~D~-----~~w~k~~~~Pvi~~~--p~~~~~~fRDP~-Vf~-~dg~~ 148 (432)
T 1w2t_A 79 VE-KDGKMFLVYTYYRDPTHNKGEKETQCVVMSENG-----LDFVKYDGNPVISKP--PEEGTHAFRDPK-VNR-SNGEW 148 (432)
T ss_dssp EE-ETTEEEEEEEEEECCCSSCCCEEEEEEEEESSS-----SCCEECTTCCSBCSC--SSTTEEEEEEEE-EEE-CSSSE
T ss_pred EE-ECCEEEEEEecCccCCCCCCceEEEEEEEeCCC-----CeEEecCCCceEeCC--CccccccccCCE-EEE-ECCEE
Confidence 87 59999999999754 24689999999984 689998889999654 322357899999 566 48999
Q ss_pred EEEEeeec-CCccEEEEEEcCCCCCcEEcccccccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCCCce
Q 010428 199 RVIIGSKI-NRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKH 277 (511)
Q Consensus 199 ~m~~ga~~-~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~~~~ 277 (511)
||++|++. +..|+|.+|+|+||++|++.+.+.... .++|||||+||+++ | ||||++|.++...
T Consensus 149 ~m~~g~~~~~~~g~i~ly~S~Dl~~W~~~g~~~~~~-~g~~~EcP~lf~~~--g-------------~~vL~~s~~g~~~ 212 (432)
T 1w2t_A 149 RMVLGSGKDEKIGRVLLYTSDDLFHWKYEGAIFEDE-TTKEIDCPDLVRIG--E-------------KDILIYSITSTNS 212 (432)
T ss_dssp EEEEEEEETTTEEEEEEEEESSSSSCEEEEEEEEET-TCSCCEEEEEEEET--T-------------EEEEEEEETTTTE
T ss_pred EEEEEEecCCCCcEEEEEECCCCCCceEccccccCC-CCCEEECCeEEEEC--C-------------EEEEEEeCCCCcc
Confidence 99999885 567899999999999999987655442 36799999999997 5 9999999988778
Q ss_pred eEEEEEEEeCCCCeeecCCCCcCCCCccccccCC-CccceeeecCCCCcEEEEEeccCCCC--CCCCCCCCCccccccce
Q 010428 278 EYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSS--VNDDVKKGWAGIQAIPR 354 (511)
Q Consensus 278 ~~Y~iG~~d~~~~~F~p~~~~~d~~~~~~lD~G~-fYA~qtf~d~~~grril~gW~~~~~~--~~~~~~~gW~g~lslPR 354 (511)
+.|++|+|| + ..|.++. +.++|+|+ |||||||.|+ + |||+||||++++. ..++.++||+|+|||||
T Consensus 213 ~~Y~~G~~d-~-~~~~~~~-------~~~lD~G~dfYA~qtf~~~-~-rri~~gW~~~~~~~~~~pt~~~gW~g~~tlPR 281 (432)
T 1w2t_A 213 VLFSMGELK-E-GKLNVEK-------RGLLDHGTDFYAAQTFFGT-D-RVVVIGWLQSWLRTGLYPTKREGWNGVMSLPR 281 (432)
T ss_dssp EEEEEEEEE-T-TEEEEEE-------EEESCCSSSCEEEEECBSC-S-SEEEEEESSCTTTGGGCCGGGGTEECCBCCCE
T ss_pred eEEEEEEec-C-CEEcCCc-------cceeccCCCccccceecCC-C-CEEEEEEecCcccccccCcccCCCcCceeccE
Confidence 999999999 5 5565543 67999998 9999999986 5 9999999999987 55666799999999999
Q ss_pred EEEEecCCCeEEecchHHHHHhhhcceeccceEecCCcEEEEcccccceeeeEEEEEE----cccccccccCCCccCccc
Q 010428 355 KLWLDKSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQADVEISFDV----SDFKKAEKLDPGWTNPQL 430 (511)
Q Consensus 355 eL~l~~~g~~L~q~Pv~el~~LR~~~~~~~~~~~~~~~~~~~~~~~~~~~die~~~~l----~~~~~~e~~~~~~~~~~~ 430 (511)
||+|+ +| +|+|+||+||++||.+.+...+ .+ ...+.+..+.+++|+++|+. .-....+.+.+.+ +...
T Consensus 282 ~l~l~-~g-~L~q~Pv~el~~lr~~~~~~~~-~~----~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~i~~-~~~~ 353 (432)
T 1w2t_A 282 ELYVE-NN-ELKVKPVDELLALRKRKVFETA-KS----GTFLLDVKENSYEIVCEFSGEIELRMGNESEEVVITK-SRDE 353 (432)
T ss_dssp EEEEE-TT-EEEEEECGGGGGGEEEEEEEES-SC----EEEECCCSSSCEEEEEEEEEEEEEEEECSSCEEEEEE-ETTE
T ss_pred EEEEe-CC-EEEEEEcHHHHHhhccceeccc-cc----eeEecCCCCeEEEEEEEEeceEEEEEeCCCCeEEEEE-ECCE
Confidence 99997 67 7999999999999998765443 22 13445555566776665421 1001112222333 2334
Q ss_pred cccccCCcccCCcccceeEEeecCCCceeeEEEEEEEeCCCCcEEEEEecCCCCccCccccC
Q 010428 431 LCSQKGASVKGALGPFGLLALASKDLKEYTAVFFRIFKGEDNKFVVLMCSDQSRSLQFFSFN 492 (511)
Q Consensus 431 ~~~~~~~~~~~~~g~~Gl~v~~s~~~~E~t~i~f~~~~~~~~~~~~~~~~d~~~Ss~~~~~~ 492 (511)
+|.++..+... +|....+. +.+...+..+|+.|. +..++|++.+++.|++.+...
T Consensus 354 ~~~dr~~~~~~----~g~~~~~~--~~~~~~~~l~i~vD~-s~vEvF~n~G~~~t~r~yp~~ 408 (432)
T 1w2t_A 354 LIVDTTRSGVS----GGEVRKST--VEDEATNRIRAFLDS-CSVEFFFNDSIAFSFRIHPEN 408 (432)
T ss_dssp EEEECTTSSTT----CCCEEEEE--CCCCSSEEEEEEEET-TEEEEEETTTEEEEEECCCSS
T ss_pred EEEEcCCCCCC----CCeEEEEE--eCCCCeeEEEEEEcC-CEEEEEECCCEEEEEEEeCCC
Confidence 55554332111 34322222 112223667788887 889999887777888887654
|
| >2yfr_A Levansucrase, inulosucrase; fructosyltransferase, glycoside hydrolase family GH68, trans sugar utilization; 1.75A {Lactobacillus johnsonii} PDB: 2yft_A* 2yfs_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=7.2e-32 Score=289.77 Aligned_cols=275 Identities=16% Similarity=0.155 Sum_probs=186.3
Q ss_pred cCC-cceEE-ECCEEEEEee-eCCCCCCCCCcEEEEEEeC----CCCcceecCCCCCCCCCccCCCeEeeeEEEcCCCce
Q 010428 59 NDP-NGVMI-YKGIYHLFYQ-YNPKGAVWGNIVWAHSTSK----DLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKP 131 (511)
Q Consensus 59 NDP-nG~~~-~~G~YHLFYQ-~~P~~~~~g~~~WgHa~S~----DLvhW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~ 131 (511)
+|| +|-++ ++|.||+||+ ..|+ ++..||.|..++ ||+||++.++++.|+.++ .|||||||++..||++
T Consensus 134 ~D~~~G~v~~~~G~~vvf~L~~dP~---~~d~Hi~~~ys~~g~~DLvhW~~~G~~~~~~~~~--~g~WSGSAi~~~DG~l 208 (571)
T 2yfr_A 134 QDAKTGYVSNWNGYQLVIGMMGVPN---VNDNHIYLLYNKYGDNDFNHWKNAGPIFGLGTPV--IQQWSGSATLNKDGSI 208 (571)
T ss_dssp BCTTTCCBCCBTTEEEEEEEEECTT---SCCCEEEEEEEETTCCCGGGCEEEEETTCSCCTT--EEEEEEEEEECTTSCE
T ss_pred EecCCCcEEEecCceEEEEEccCCC---CCCcEEEEEECcCCccccCCccCCCeEcCCCCCC--CceECCeeEECcCCEE
Confidence 567 78777 7899999999 6665 588999999998 679999999999887443 7999999987569999
Q ss_pred EEEEeccCCC--CcceEEEEEe-------cCCCCcccceeeecCCCceecCCCCCc-------------CCCCCCCCCEE
Q 010428 132 AIFYTGIDPH--NRQVQNLAVP-------KNLSDPYLREWVKSPKNPLMAPDAMNQ-------------INTSSFRDPTT 189 (511)
Q Consensus 132 ~l~YTg~~~~--~~q~q~lA~s-------~d~~d~~l~~w~K~~~nPVi~~p~~~~-------------~~~~~fRDP~v 189 (511)
+|||||+... +.+.|++|+. .+..+..+..|++. .+|+.++. .. ....+||||+
T Consensus 209 ~LFYTG~~~~~~~~~~Q~Ia~a~~~l~~~~s~dgv~~~kw~~~--~~l~~~dg-~~Yqt~~q~~~~~~~~~~~~FRDP~- 284 (571)
T 2yfr_A 209 QLYYTKVDTSDNNTNHQKLASATVYLNLEKDQDKISIAHVDND--HIVFEGDG-YHYQTYDQWKETNKGADNIAMRDAH- 284 (571)
T ss_dssp EEEEEEEECTTTTCCEEEEEEEEEEEEEEGGGTEEEEEEEEEE--EEEECCCS-SSBCCHHHHHHHCSSCCCCCCEEEE-
T ss_pred EEEEeccccCCCCcccceEEEEEeeeeecccCCCcceecccCC--CceecCCC-cccccccccccccccCCcccCcCCe-
Confidence 9999997542 3356666652 11111123445443 45554431 11 1468999999
Q ss_pred EEeCCCCeEEEEEeeecCC------------------------------------------ccEEEEEEcCCC----CCc
Q 010428 190 AWLGPDKRWRVIIGSKINR------------------------------------------KGLAILYRSKDF----VHW 223 (511)
Q Consensus 190 vw~~~~g~w~m~~ga~~~~------------------------------------------~G~i~ly~S~Dl----~~W 223 (511)
||++++|+|||++|++... .|+|.||+|+|+ .+|
T Consensus 285 Vf~d~dG~~YMVfgA~t~~~~~~G~~~ly~w~~yg~~~~f~~~~~~~v~~~~~~~~~a~~~~G~IgL~~s~dl~~n~~~W 364 (571)
T 2yfr_A 285 VIDDDNGNRYLVFEASTGTENYQGDDQIYQWLNYGGTNKDNLGDFFQILSNSDIKDRAKWSNAAIGIIKLNDDVKNPSVA 364 (571)
T ss_dssp EEECTTCCEEEEEEEEBCTTSCCSGGGGGBGGGTCSCHHHHHHHHHHHHHCHHHHHHHHHCCEEEEEEEECSCTTSCCEE
T ss_pred EEEeCCCCEEEEEEeccCCCCcccchhhccccccccccccchhhhccccccccccccchhccceEEEEEcCCCcCCcccc
Confidence 4764469999999998532 489999999775 589
Q ss_pred EEcccccccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCCCc-----------------eeEE-EEEEE
Q 010428 224 IKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTK-----------------HEYY-TVGTY 285 (511)
Q Consensus 224 ~~~~~~l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~~~-----------------~~~Y-~iG~~ 285 (511)
++.++++.......|||||++|+++ | +|||++|....+ ...| ++.+
T Consensus 365 e~~~pL~~~~~v~dm~EcP~lf~~d--G-------------~yyL~~S~q~~~~t~~~~~~~A~g~~g~~~~~y~~vSd- 428 (571)
T 2yfr_A 365 KVYSPLISAPMVSDEIERPDVVKLG--N-------------KYYLFAATRLNRGSNDDAWMATNKAVGDNVAMIGYVSD- 428 (571)
T ss_dssp EECCCSEECTTTBSCCEEEEEEEET--T-------------EEEEEEEEEGGGBSCHHHHHHHHHHHSCCEEEEEEEES-
T ss_pred eeccccccCCCcCceeecCcEEEEC--C-------------EEEEEEeCCCCcccccccccccccCcCCceEEEEEEeC-
Confidence 9876433332335699999999998 6 899998864311 2333 4432
Q ss_pred eCCCCeeecCCCCc---CC--CCccccccCC-CccceeeecCCCCcEEEEEeccCCCCCCCCCCCCCccccccceEEEEe
Q 010428 286 STAKDRYVPDEGSV---ES--DSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLD 359 (511)
Q Consensus 286 d~~~~~F~p~~~~~---d~--~~~~~lD~G~-fYA~qtf~d~~~grril~gW~~~~~~~~~~~~~gW~g~lslPReL~l~ 359 (511)
.-.+.|.|-+... .. ....+++ +. +||.++..+ .+++++++||...... ...+|.|.++-+..|.++
T Consensus 429 -sl~GPy~plng~glVL~~~~P~~~~~~-tyS~Ya~p~~~~--~~~~lv~s~i~~r~~~---~~~~~~GTlap~~~vq~~ 501 (571)
T 2yfr_A 429 -NLTHGYVPLNESGVVLTASVPANWRTA-TYSYYAVPVEGR--DDQLLITSYITNRGEV---AGKGMHATWAPSFLLQIN 501 (571)
T ss_dssp -SSSSCCEETTTTSEEEECCSCTTSTTC-EEEEEEEEETTE--EEEEEEEEEESCSTTT---TCTTCCCEECEEEEEEEE
T ss_pred -CCCCCCeeCCCCceeecCCCCCccccc-cceeEEEecccC--CCcEEEEEEeCCcCCC---CCcccceeecCcEEEEEc
Confidence 2345676622100 00 0001121 22 777776543 3568999999987653 346799999888888888
Q ss_pred cCCCeE
Q 010428 360 KSGKHL 365 (511)
Q Consensus 360 ~~g~~L 365 (511)
.+|.+.
T Consensus 502 ~dgt~~ 507 (571)
T 2yfr_A 502 PDNTTT 507 (571)
T ss_dssp TTTEEE
T ss_pred CCCCEE
Confidence 777533
|
| >1oyg_A Levansucrase; glycoside hydrolase, beta-propeller, TR; 1.50A {Bacillus subtilis} SCOP: b.67.2.2 PDB: 1pt2_A* 3byl_A 3byn_A* 3byk_A 3byj_A 2vdt_A 3om4_A* 3om7_C* 3om6_A* 3om5_A* 3om2_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=275.58 Aligned_cols=276 Identities=17% Similarity=0.159 Sum_probs=186.1
Q ss_pred CCCccCC------cceE-EECCEEEEEeeeCCCCCCCCCcEEEEEEeC----CCCcceecCCCCCCC------CCc--cC
Q 010428 55 KNWINDP------NGVM-IYKGIYHLFYQYNPKGAVWGNIVWAHSTSK----DLINWIPHDPAIYPS------QQS--DI 115 (511)
Q Consensus 55 ~gw~NDP------nG~~-~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~----DLvhW~~~~~aL~P~------~~~--D~ 115 (511)
..|+.|+ +|-+ .++|.+++||+..+... ++..||+|+.|+ ||+||++.++++.+. .++ +.
T Consensus 55 ~~~VWDsWpl~d~~G~~~~~~g~~lif~L~~dp~~-~~~~hi~~~ys~~g~~dl~~W~~~G~vfp~~~~~~~~~~~~~~~ 133 (447)
T 1oyg_A 55 GLDVWDSWPLQNADGTVANYHGYHIVFALAGDPKN-ADDTSIYMFYQKVGETSIDSWKNAGRVFKDSDKFDANDSILKDQ 133 (447)
T ss_dssp TCEEEEEEEEECTTSSBCCBTTEEEEEEEEECTTC-TTCCEEEEEEEETTCCSGGGCEEEEESCCTTHHHHTTCTTGGGC
T ss_pred CCcccccceEECCCCCEEEecCcEEEEEEcCCCCC-CCceEEEEEECcCCCcccCCccCCCeecCCCccccccccccCCC
Confidence 5788765 4433 24677779999876433 578999999999 569999999844442 344 36
Q ss_pred CCeEeeeEEEcCCCceEEEEeccCCC--CcceEEEEE-----ecCCCCcccceeeecCCCceecCCCC------------
Q 010428 116 NGCWSGSATILPGEKPAIFYTGIDPH--NRQVQNLAV-----PKNLSDPYLREWVKSPKNPLMAPDAM------------ 176 (511)
Q Consensus 116 ~g~~SGsav~~~dg~~~l~YTg~~~~--~~q~q~lA~-----s~d~~d~~l~~w~K~~~nPVi~~p~~------------ 176 (511)
.|||||||++..||+++|||||+... ..|+++.|. ++|+ ..+..|++. ++|+.++..
T Consensus 134 ~g~WSGSAi~~~dG~i~LfYTg~~~~~~~~q~I~~a~~~l~~~~dg--v~~~~~~~~--~~l~~~Dg~~Yq~~~q~~~~~ 209 (447)
T 1oyg_A 134 TQEWSGSATFTSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSS--LNINGVEDY--KSIFDGDGKTYQNVQQFIDEG 209 (447)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEEEGGGTTEEEEEEEEEEEEECSSC--EEEEEEEEE--EEEECCCSSSBCCHHHHHHHT
T ss_pred CCEECCceEECcCCEEEEEEEeecCCCCCceEEEEEecceeecCCC--cceecccCC--CceEcCCCccccccccccccc
Confidence 89999999975799999999997642 234443333 3332 113344442 466654310
Q ss_pred --CcCCCCCCCCCEEEEeCCCCeEEEEEeeecCC------------------------------------------ccEE
Q 010428 177 --NQINTSSFRDPTTAWLGPDKRWRVIIGSKINR------------------------------------------KGLA 212 (511)
Q Consensus 177 --~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~------------------------------------------~G~i 212 (511)
+..+..+||||+| |+ ++|+|||++|++... .|+|
T Consensus 210 ~~~~~~~~~fRDP~V-f~-d~G~~ymvfgA~t~~~~g~~~~~~l~~w~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~G~I 287 (447)
T 1oyg_A 210 NYSSGDNHTLRDPHY-VE-DKGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGAL 287 (447)
T ss_dssp GGGGTCCCCCEEEEE-EE-ETTEEEEEEEEEBCTTSCCSSGGGGGBGGGTCSCHHHHHHHHHHHHHSTTHHHHHHCCEEE
T ss_pred cccCCCccccCCCeE-Ee-ECCEEEEEEeeecCCCCcccchhhhcchhhcccCcccchhhhhhcccccccccchhcCcEE
Confidence 0123468999995 66 479999999998632 3799
Q ss_pred EEE-EcCCCCCcEEcccccccC-CCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCCCc--------eeEEEE
Q 010428 213 ILY-RSKDFVHWIKAKHPLHSV-KGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTK--------HEYYTV 282 (511)
Q Consensus 213 ~ly-~S~Dl~~W~~~~~~l~~~-~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~~~--------~~~Y~i 282 (511)
.|+ .|+|+.+|++.+ ||... ....|||||++|+++ | ||||++|..... ...|++
T Consensus 288 gl~~~s~Dl~~W~~~~-pL~~~~~v~d~~EcPdlfk~d--G-------------kyyLf~S~~~s~~~~~g~~~~~vy~~ 351 (447)
T 1oyg_A 288 GMIELNDDYTLKKVMK-PLIASNTVTDEIERANVFKMN--G-------------KWYLFTDSRGSKMTIDGITSNDIYML 351 (447)
T ss_dssp EEEEECTTSSEEEEEE-EEEECTTTCSCCEEEEEEEET--T-------------EEEEEEEEEGGGCCCTTCCTTCEEEE
T ss_pred EEEEcCCCCCCceEcc-ccccCCCCCCceEcCcEEEEC--C-------------EEEEEEecCCCcccccCcCCCcEEEE
Confidence 877 699999999875 55443 345699999999998 6 999999964321 247877
Q ss_pred EEE-eCCCCeeecCCCC-c--C--CCCccccccCC-CccceeeecCCCCcEEEEEeccCCCCCCCCCCCCCccccccceE
Q 010428 283 GTY-STAKDRYVPDEGS-V--E--SDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRK 355 (511)
Q Consensus 283 G~~-d~~~~~F~p~~~~-~--d--~~~~~~lD~G~-fYA~qtf~d~~~grril~gW~~~~~~~~~~~~~gW~g~lslPRe 355 (511)
|-. +.-.+.|.|-+.. . . .....+++ +. +||.++. + .+++++++||..... ...|.|.++-+..
T Consensus 352 g~vsdsl~GPy~plngsGlVl~~~~p~~~~~~-~ys~ya~p~~-~--~~~~~v~sf~~~~~~-----~~~~ggtlap~~~ 422 (447)
T 1oyg_A 352 GYVSNSLTGPYKPLNKTGLVLKMDLDPNDVTF-TYSHFAVPQA-K--GNNVVITSYMTNRGF-----YADKQSTFAPSFL 422 (447)
T ss_dssp EEEESSTTCCCEEGGGTSEEEEECCCTTCTTC-EEEEEEECCS-S--SSEEEEEEEESCTTS-----CSSCCCEECBCEE
T ss_pred EEEcCCCCCCCeeCCCCceeecCCCCCccccc-cceeEEEecC-C--CCeEEEEEEeCCCCc-----ccccceeecCcEE
Confidence 743 3335677762100 0 0 00011333 44 8988887 5 358999999998743 2469999999999
Q ss_pred EEEecCC
Q 010428 356 LWLDKSG 362 (511)
Q Consensus 356 L~l~~~g 362 (511)
|.++.++
T Consensus 423 v~~~gd~ 429 (447)
T 1oyg_A 423 LNIKGKK 429 (447)
T ss_dssp EEEETTE
T ss_pred EEEcCCc
Confidence 9998554
|
| >3r4z_A Glycosyl hydrolase family 32, N terminal; AGAR metabolism, neoagarobiose, 3,6-anhydro-L-galactose, ALP galactopyranose, bioenergy; HET: GLA; 1.55A {Saccharophagus degradans} PDB: 3r4y_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.6e-25 Score=231.96 Aligned_cols=195 Identities=17% Similarity=0.276 Sum_probs=151.1
Q ss_pred CCCCCCccccccCCCC--------CccCCcceEEECCEEEEEeeeCCCC-------------CCCCCcEEEEEEeCCCCc
Q 010428 41 PNQPYRTGYHFQPPKN--------WINDPNGVMIYKGIYHLFYQYNPKG-------------AVWGNIVWAHSTSKDLIN 99 (511)
Q Consensus 41 ~~~~~Rp~yHf~p~~g--------w~NDPnG~~~~~G~YHLFYQ~~P~~-------------~~~g~~~WgHa~S~DLvh 99 (511)
.+..++++||++|..| |+||||++++++|+||||||++|.. ..|+.++|+||+|+||+|
T Consensus 25 ~~g~~f~~~~~~P~~g~~~~~e~~~~~DP~~v~~~dG~Yymfyt~~~~~~~G~~~~~~~~~~~~w~~~~i~~a~S~DLv~ 104 (374)
T 3r4z_A 25 KGPEWLFEFDITPLKGDLAYEEGVIRRDPSAVLKVDDEYHVWYTKGEGETVGFGSDNPEDKVFPWDKTEVWHATSKDKIT 104 (374)
T ss_dssp SCSTTCEEEEEEECEETTSCCTTEEEECCCCBEEETTEEEEEEEEEESCCCCSSCSCTTSCSSTTTTCEEEEEEESSSSE
T ss_pred CCCchHHhcccccccCCccccCCcCcCCCCeEEEECCEEEEEEEcCCCcccccccccccccccccCccEEEEEECCCCcC
Confidence 4677899999999999 9999999999999999999998642 136789999999999999
Q ss_pred ceecCCCCCCCC--CccCCCeEeeeEEEcCCCceEEEEeccCCC----CcceEEEEEecCCCCcccceeeecCCCceecC
Q 010428 100 WIPHDPAIYPSQ--QSDINGCWSGSATILPGEKPAIFYTGIDPH----NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAP 173 (511)
Q Consensus 100 W~~~~~aL~P~~--~~D~~g~~SGsav~~~dg~~~l~YTg~~~~----~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~ 173 (511)
|++++++|.|.. .||..+||+|+++. .+|+++|+||+.... ..+.+++|+|+|.. ..|+|. .+|||.+
T Consensus 105 W~~~g~~l~~~~~~~~d~~gvwaPsvi~-~dGkyyL~Yt~~~~~~~~~~~~~igvA~Sdd~~----Gpw~~~-~~Pvi~~ 178 (374)
T 3r4z_A 105 WKEIGPAIQRGAAGAYDDRAVFTPEVLR-HNGTYYLVYQTVKAPYLNRSLEHIAIAYSDSPF----GPWTKS-DAPILSP 178 (374)
T ss_dssp EEEEEEEECCCCTTSTTSSEEEEEEEEE-ETTEEEEEEEEECSSCCTTCCBEEEEEEESSTT----CCCEEC-SSCSBCC
T ss_pred cEeCcccCCCCCCCCccCCCEECCEEEE-ECCEEEEEEEeccCCCCCCCcceEEEEEECCCC----CCeEEC-CCCEeCC
Confidence 999999998864 78899999999987 499999999997542 34789999998863 579996 7899964
Q ss_pred CCC----------------CcCCCCCCCCCEEEEeCCCCeEEEEEeeecCC-----c---cEEEEEEcCCCC-CcEEcc-
Q 010428 174 DAM----------------NQINTSSFRDPTTAWLGPDKRWRVIIGSKINR-----K---GLAILYRSKDFV-HWIKAK- 227 (511)
Q Consensus 174 p~~----------------~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~-----~---G~i~ly~S~Dl~-~W~~~~- 227 (511)
... ..++...++||.| ++ .+|+|||++++...+ . -++.+++|+++. .|+...
T Consensus 179 ~~~~~w~~ddd~~~~~~~~~~~d~~~~~~P~v-~~-~~g~yyl~Y~~~~~~~~~~~~~~~~~igvA~sds~~Gpw~~~~~ 256 (374)
T 3r4z_A 179 ENDGVWDTDEDNRFLVKEKGSFDSHKVHDPCL-MF-FNNRFYLYYKGETMGESMNMGGREIKHGVAIADSPLGPYTKSEY 256 (374)
T ss_dssp CCCSEECSSSSCTTCEEECCSTTSSEEEEEEE-EE-ETTEEEEEEEEECTTCCEETTEECEEEEEEEESSTTCCCEECTT
T ss_pred CcCCceeecCCceEEEecCCccccCccccceE-EE-ECCEEEEEEEecCCCCccccCCCcceEEEEEECCCCCCCEECCC
Confidence 310 1123345789995 55 589999999887421 1 158888998864 699853
Q ss_pred cccccCCCCCceecCceEEec
Q 010428 228 HPLHSVKGTGMWECPDFFPVS 248 (511)
Q Consensus 228 ~~l~~~~~~g~wECPdlf~l~ 248 (511)
.|+..... =|.+|+.+
T Consensus 257 ~Pi~~~~~-----dp~V~~~~ 272 (374)
T 3r4z_A 257 NPITNSGH-----EVAVWPYK 272 (374)
T ss_dssp CCCCSSCS-----SCCEEEET
T ss_pred CCEeCCCC-----CCceEEeC
Confidence 45543221 25666655
|
| >3p2n_A 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-propeller, glycoside hydrolase family GH117, agaro-oligosaccharides, CARB hydrolase; 1.95A {Zobellia galactanivorans} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.9e-25 Score=232.07 Aligned_cols=196 Identities=16% Similarity=0.246 Sum_probs=148.7
Q ss_pred CCCCCCCccc-cccCCCC--------CccCCcceEEECCEEEEEeeeCCC-------------CCCCCCcEEEEEEeCCC
Q 010428 40 SPNQPYRTGY-HFQPPKN--------WINDPNGVMIYKGIYHLFYQYNPK-------------GAVWGNIVWAHSTSKDL 97 (511)
Q Consensus 40 ~~~~~~Rp~y-Hf~p~~g--------w~NDPnG~~~~~G~YHLFYQ~~P~-------------~~~~g~~~WgHa~S~DL 97 (511)
..+++|||.| |++|+.| ++||||++++++|+||||||++|. ...|+.++|+||+|+||
T Consensus 68 ~~~~~~~~~~~~~~p~~g~~~~~~~v~~~DP~~vi~~dG~Yylfyt~~~~~~~G~~~~~~~~~~~p~~~~~i~~A~S~Dl 147 (408)
T 3p2n_A 68 DLGNEWFIQFGPLQPLKGDLAYEEGVVRRDPSAIIKENGKYYVWYSKSTGPTQGFGGDIEKDKVFPWDRCDIWYATSEDG 147 (408)
T ss_dssp TCCSTTCEEECCCEECEETTSCCTTEEEECCCCBEEETTEEEEEEEEEESCCCCSSSCTTTSCCSTTTTCEEEEEEESSS
T ss_pred ccCCchhhcccccCCcCCCccccCCcEeCCCCEEEEECCEEEEEEEeCCCcccccccccccccccccccceEEEEEcCCC
Confidence 4688999999 9999999 999999999999999999998762 12356889999999999
Q ss_pred CcceecCCCCCCCC--CccCCCeEeeeEEEcCCCceEEEEeccCCC---C-cceEEEEEecCCCCcccceeeecCCCcee
Q 010428 98 INWIPHDPAIYPSQ--QSDINGCWSGSATILPGEKPAIFYTGIDPH---N-RQVQNLAVPKNLSDPYLREWVKSPKNPLM 171 (511)
Q Consensus 98 vhW~~~~~aL~P~~--~~D~~g~~SGsav~~~dg~~~l~YTg~~~~---~-~q~q~lA~s~d~~d~~l~~w~K~~~nPVi 171 (511)
+||++.+++|.|.. .||..+||+++++. .+|+++||||++... + ...+++|++.+.. +. |++. .+||+
T Consensus 148 v~W~~~g~~l~~~~~~~wd~~gv~aPsVi~-~dGkYyL~Yt~~~~~~~~~~~~~i~va~A~S~D---G~-W~~~-~~pli 221 (408)
T 3p2n_A 148 WTWKEEGPAVTRGEKGAYDDRSVFTVEIMK-WEDKYYLCYQTVKSPYNVRVKNQVGLAWADSPD---GP-WTKS-EEPIL 221 (408)
T ss_dssp SEEEEEEEEECCCSTTSTTSSEEEEEEEEE-ETTEEEEEEEEECSSCCTTCCCEEEEEEESSTT---CC-CEEC-SSCSB
T ss_pred CeeeEeCceeCCCCCCCcccCceEeeEEEE-ECCEEEEEEEeecCCCCCcCCCceEEEEEECCC---CC-EEEC-Cccee
Confidence 99999999998864 78889999999987 599999999996431 1 3466777765431 35 9997 57888
Q ss_pred cCCC----------------CCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCC--------ccEEEEEEcCCCC-CcEEc
Q 010428 172 APDA----------------MNQINTSSFRDPTTAWLGPDKRWRVIIGSKINR--------KGLAILYRSKDFV-HWIKA 226 (511)
Q Consensus 172 ~~p~----------------~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~--------~G~i~ly~S~Dl~-~W~~~ 226 (511)
.+.. ...++...+++|.|+ + .+|+|||++++...+ .-++.+++|+|+. .|+..
T Consensus 222 ~~~~~~~~~~e~d~~~~~~~~~~wd~~~v~~P~v~-~-~~G~yyl~Ys~~~~g~~~~~~~~~~~igvA~Sdd~~Gpw~k~ 299 (408)
T 3p2n_A 222 SPADNGVWKGEEQDRFAVIKKGDFDSHKVHDPCII-P-YKGKFYLYYKGEQMGEAITFGGRQIRHGVAIADNPKGPYVKS 299 (408)
T ss_dssp CCCSCCEECSSSCCTTCEEECCSTTSSEEEEEEEE-E-ETTEEEEEEEEECTTCCEETTEECCEEEEEEESSTTCCCEEC
T ss_pred CCCCCceEEEecCCcccccccceecCCCeEcceEE-E-ECCEEEEEEEcccCccccccCCCccEEEEEEECCCCCCcEEC
Confidence 5420 123444557999964 4 589999999886421 2367899999987 99986
Q ss_pred c-cccccCCCCCceecCceEEec
Q 010428 227 K-HPLHSVKGTGMWECPDFFPVS 248 (511)
Q Consensus 227 ~-~~l~~~~~~g~wECPdlf~l~ 248 (511)
. .|+.... .| |-+|+-+
T Consensus 300 ~~nPVl~~~----~d-p~Vw~~~ 317 (408)
T 3p2n_A 300 PYNPISNSG----HE-ICVWPYN 317 (408)
T ss_dssp TTCCSCSSC----SS-CCEEEET
T ss_pred CCCCcccCC----CC-CeeEecC
Confidence 4 3554322 12 6666554
|
| >1w18_A Levansucrase; transferase, fructosyl transferase, glycosyltransferase; 2.5A {Gluconacetobacter diazotrophicus} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-25 Score=238.06 Aligned_cols=204 Identities=16% Similarity=0.201 Sum_probs=146.4
Q ss_pred cCCCCCcc------CCcc-eEEECCEEEEEeeeCCCCC--CCCCc----EEEEEEeCC---------CCcceecCCCCCC
Q 010428 52 QPPKNWIN------DPNG-VMIYKGIYHLFYQYNPKGA--VWGNI----VWAHSTSKD---------LINWIPHDPAIYP 109 (511)
Q Consensus 52 ~p~~gw~N------DPnG-~~~~~G~YHLFYQ~~P~~~--~~g~~----~WgHa~S~D---------LvhW~~~~~aL~P 109 (511)
+-+..|+. ||+| ++.++|.||+|||..|... .|+.+ ++||+.|+| |+||++.+.+|.+
T Consensus 66 ~~~d~wVWDsWPl~D~dg~~v~~~G~~~vF~L~a~r~~~~~~~drH~~a~I~~~yskdg~~~~~~~~l~~W~~~G~vf~~ 145 (493)
T 1w18_A 66 INPDVWVWDTWTLIDKHADQFSYNGWEVIFCLTADPNAGYGFDDRHVHARIGFFYRRAGIPASRRPVNGGWTYGGHLFPD 145 (493)
T ss_dssp SCTTCEEEEEEEEECTTCCBEEETTEEEEEEEEECTTSSCCGGGCGGGCEEEEEEEESSCCGGGSCTTCCCEEEEESSCT
T ss_pred ccCCcceEcCeeEECCCCCEEEECCeEEEEEEecCCccCCCccCCCccceeeeEEecCccccccccccCCceECCccccC
Confidence 34778875 6888 7789999999999998865 35444 455999999 7999999998866
Q ss_pred CCC--------ccCCCeEeeeEEEc--CCCceEEEEeccCC----CC----cceEEEEEec-----CCCCcccceeeecC
Q 010428 110 SQQ--------SDINGCWSGSATIL--PGEKPAIFYTGIDP----HN----RQVQNLAVPK-----NLSDPYLREWVKSP 166 (511)
Q Consensus 110 ~~~--------~D~~g~~SGsav~~--~dg~~~l~YTg~~~----~~----~q~q~lA~s~-----d~~d~~l~~w~K~~ 166 (511)
+.. ++..++|||||++. .||+++||||++.. ++ ...|+||.+. +..+..+.+|+|.
T Consensus 146 g~~~~~~~~~~~d~~~~WSGSAi~~~~~dG~i~LFYTg~~~~~~~~g~~~~~~~Q~Ia~a~~~l~a~~dgv~~~~w~k~- 224 (493)
T 1w18_A 146 GASAQVYAGQTYTNQAEWSGSSRLMQIHGNTVSVFYTDVAFNRDANANNITPPQAIITQTLGRIHADFNHVWFTGFTAH- 224 (493)
T ss_dssp TGGGGGSTTSCCSEEEEEEEEEEESSTTSCEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEE-
T ss_pred CCccccccccccCcCCeEcCceEEeccCCCEEEEEEEecccccccccccCCcceeEEEEeccceeccCCCccccccccC-
Confidence 532 45679999999985 79999999999743 11 1257777432 2222346789885
Q ss_pred CCceecCCCCCcC------CCCCCCCCEEEEeCC-CCeEEEEEeeecC--------------------------------
Q 010428 167 KNPLMAPDAMNQI------NTSSFRDPTTAWLGP-DKRWRVIIGSKIN-------------------------------- 207 (511)
Q Consensus 167 ~nPVi~~p~~~~~------~~~~fRDP~vvw~~~-~g~w~m~~ga~~~-------------------------------- 207 (511)
.+|+.++. ..| ...+||||+|+...+ +|+|||+++++..
T Consensus 225 -~~l~~~DG-~~Yqt~~q~~~~~fRDP~vf~D~~~dG~~YmvFeant~~~~g~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 302 (493)
T 1w18_A 225 -TPLLQPDG-VLYQNGAQNEFFNFRDPFTFEDPKHPGVNYMVFEGNTAGQRGVANCTEADLGFRPNDPNAETLQEVLDSG 302 (493)
T ss_dssp -EEEECCCS-SSBCCTTTCTTCCCEEEEEEECTTSTTCEEEEEEEEBSSCTTCCCCCHHHHCCCTTCTTCCCHHHHHHTT
T ss_pred -CceeecCc-cccccccccCCccccCCEEEecCCCCCCEEEEEEeccCCCCcccccccccccccCCccccchhhhccccc
Confidence 56775431 112 246899999644322 4999999998752
Q ss_pred ---CccEEEEEE--cCCCCCcEEcccccccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 010428 208 ---RKGLAILYR--SKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (511)
Q Consensus 208 ---~~G~i~ly~--S~Dl~~W~~~~~~l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~ 273 (511)
..|+|.|++ |+|+.+|++..+++.......|+|||++|+++ | ||+|+.|..
T Consensus 303 a~~~~g~IGLa~~~s~Dl~~We~~~PL~~a~~v~deiErP~V~~~~--G-------------kyYLFtSs~ 358 (493)
T 1w18_A 303 AYYQKANIGLAIATDSTLSKWKFLSPLISANCVNDQTERPQVYLHN--G-------------KYYIFTISH 358 (493)
T ss_dssp GGGCCEEEEEEEESSTTSCCEEEEEEEEECTTTBSCCEEEEEEEET--T-------------EEEEEEEEC
T ss_pred chhccceEEEEEeCCCCCccceecCccccCCCCCCcEECCeEEEEC--C-------------EEEEEEEcc
Confidence 146775555 56999999875433444445699999999998 6 999998854
|
| >4ak5_A Anhydro-alpha-L-galactosidase; hydrolase, marine glycoside hydrolase, marine polysaccharide degradation, marine cazymes, AGAR metabolism; 1.70A {Bacteroides plebeius} PDB: 4ak7_A* 4ak6_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.4e-24 Score=226.54 Aligned_cols=185 Identities=14% Similarity=0.260 Sum_probs=143.9
Q ss_pred CCCCCCCccccccCCCC-------Cc-cCCcceEEECCEEEEEeeeCCCCC-------------CCCCcEEEEEEeCCCC
Q 010428 40 SPNQPYRTGYHFQPPKN-------WI-NDPNGVMIYKGIYHLFYQYNPKGA-------------VWGNIVWAHSTSKDLI 98 (511)
Q Consensus 40 ~~~~~~Rp~yHf~p~~g-------w~-NDPnG~~~~~G~YHLFYQ~~P~~~-------------~~g~~~WgHa~S~DLv 98 (511)
.....++++||.+|..| |+ ||||++++++|+||||||++|... .|+.++|+||+|+||+
T Consensus 64 ~~~~~~f~r~~~~Pi~g~~~~~~g~~~~DP~~v~~~dG~yymfY~~~~~~~~G~~~~~~~~~~~~~~~~~i~~a~S~Dlv 143 (404)
T 4ak5_A 64 NHDNKWFFEYKMEPLKGDLAYEEGVVRRDPSAMLKIGDTYYVWYSKSYGPTQGFAGDIEKDKVFPWDRCDIWYATSKDGL 143 (404)
T ss_dssp CCCSTTCCEEEEEECEETTSCCTTEEEECCCCBEEETTEEEEEEEEEESCCCCSSSCTTTSCCSTTTTCEEEEEEESSSS
T ss_pred CCCCchhhhcccccccCCcccccceeecCCcEEEEECCEEEEEEEeCCCcccccccccccccccccCccEEEEEECCCCC
Confidence 34677888888776666 87 999999999999999999998411 3678999999999999
Q ss_pred cceecCCCCCCC--CCccCCCeEeeeEEEcCCCceEEEEeccCCC----CcceEEEEEecCCCCcccceeeecCCCceec
Q 010428 99 NWIPHDPAIYPS--QQSDINGCWSGSATILPGEKPAIFYTGIDPH----NRQVQNLAVPKNLSDPYLREWVKSPKNPLMA 172 (511)
Q Consensus 99 hW~~~~~aL~P~--~~~D~~g~~SGsav~~~dg~~~l~YTg~~~~----~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~ 172 (511)
||++++.+|.|. ..||..+||+++++. .+|+++|+||+.... ..+.+++|+|++.. -.|++. .+|||.
T Consensus 144 ~W~~~g~~L~~~~~~~wd~~gv~aP~Vi~-~~Gkyym~Yt~~~~~~~~~~~~~IgvA~Sdsp~----Gpwt~~-~~Pvl~ 217 (404)
T 4ak5_A 144 TWKEQGIAVKRGEKGAYDDRSVFTPEVME-WKGKYYLCYQAVKSPYTVRVKNTIGMACADSPE----GLWTKT-DKPVLE 217 (404)
T ss_dssp EEEEEEEEECCCSTTSTTSSEEEEEEEEE-ETTEEEEEEEEECSCCCTTCCCEEEEEEESSTT----CCCEEC-SSCSBC
T ss_pred CceeCceEeecCCCCccccCCEEeeEEEE-ECCEEEEEEEeccCCCCCCCcceEEEEEEeCCC----CCceEC-CCceec
Confidence 999999999885 478899999999987 599999999997542 35678999998743 259995 789996
Q ss_pred CCCC----------------CcCCCCCCCCCEEEEeCCCCeEEEEEeeecCC--------ccEEEEEEcCCCC-CcEEcc
Q 010428 173 PDAM----------------NQINTSSFRDPTTAWLGPDKRWRVIIGSKINR--------KGLAILYRSKDFV-HWIKAK 227 (511)
Q Consensus 173 ~p~~----------------~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~--------~G~i~ly~S~Dl~-~W~~~~ 227 (511)
+... ..++...++||.|+ + .+|+|||++.+...+ .-++.++.|+|+. .|+...
T Consensus 218 ~~~~~~W~~ddd~~~~~~~~~~wD~~~~~~P~v~-~-~~g~yyl~Ysg~~~~~~~~~~~~~~~igvA~Sdd~~Gpw~k~~ 295 (404)
T 4ak5_A 218 PSDTGEWEGDEDNRFKVVSKGDFDSHKVHDPCII-P-YNGKFYMYYKGERMGEEITWGGREIKHGVAIAENPMGPYVKSE 295 (404)
T ss_dssp CCSCCEECSSSSCTTCEEECCSTTSSEEEEEEEE-E-ETTEEEEEEEEECTTCCEETTEECCEEEEEEESSTTCCCEECT
T ss_pred CCCCcceeeccCceeeeccCCcccCCcEECCEEE-E-ECCEEEEEEECCCCCCccccCCCcceEEEEEECCCCCCcEECC
Confidence 4310 11234457899964 4 589999999876421 1368899999986 899753
Q ss_pred -ccccc
Q 010428 228 -HPLHS 232 (511)
Q Consensus 228 -~~l~~ 232 (511)
+|+..
T Consensus 296 ~nPv~~ 301 (404)
T 4ak5_A 296 YNPISN 301 (404)
T ss_dssp TCCSCS
T ss_pred CCceec
Confidence 45543
|
| >1vkd_A Conserved hypothetical protein TM1225; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.10A {Thermotoga maritima} SCOP: b.67.2.4 | Back alignment and structure |
|---|
Probab=99.92 E-value=2.5e-24 Score=221.61 Aligned_cols=188 Identities=15% Similarity=0.201 Sum_probs=145.4
Q ss_pred CCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceec-CCCCCCC--CCccCCCe-EeeeEEEcCCCce
Q 010428 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPH-DPAIYPS--QQSDINGC-WSGSATILPGEKP 131 (511)
Q Consensus 56 gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~-~~aL~P~--~~~D~~g~-~SGsav~~~dg~~ 131 (511)
|.+| +++++++|+||||||.++. ++.++||||+|+|++||++. +++|.|+ ..++..|| |+++++.. +|++
T Consensus 55 gv~n--~~~i~~~g~~~lfY~~~~~---~~~~~~~~A~S~Dgi~w~~~~~pvl~p~~~~~~~~~g~~yDP~v~~~-~d~y 128 (338)
T 1vkd_A 55 RVFN--SAVVPYNGEFVGVFRIDHK---NTRPFLHFGRSKDGINWEIEPEEIQWVDVNGEPFQPSYAYDPRVVKI-EDTY 128 (338)
T ss_dssp EEEE--EEEEEETTEEEEEEEEEET---TSCEEEEEEEESSSSSCEECSSCCCEECTTSCBCCCSSEEEEEEEEE-TTEE
T ss_pred eEEc--cEEEEECCEEEEEEEEECC---CCcEEEEEEEeCCCCccEECCCCEEeCCCCCccccCCEEeCcEEEEE-CCEE
Confidence 4445 4889999999999999984 46799999999999999998 5889888 67888999 89999874 8899
Q ss_pred EEEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCC-CCeEEEEEeeec---C
Q 010428 132 AIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGP-DKRWRVIIGSKI---N 207 (511)
Q Consensus 132 ~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~-~g~w~m~~ga~~---~ 207 (511)
+|+||+ +. ..+.|++|.|+|. ++|+|. ++++. + ..|||. +|.+. +|+|+|+++.+. .
T Consensus 129 ym~yt~-~~-~~~~i~la~S~Dl-----~~W~~~--~~i~~-~--------~~rd~~-~fp~~i~Gky~m~~~~q~~~~~ 189 (338)
T 1vkd_A 129 YITFCT-DD-HGPTIGVGMTKDF-----KTFVRL--PNAYV-P--------FNRNGV-LFPRKINGKYVMLNRPSDNGHT 189 (338)
T ss_dssp EEEEEE-ES-SSEEEEEEEESSS-----SSEEEE--CCSSS-S--------SEEEEE-ECSSCBTTBEEEEEEECCSSSC
T ss_pred EEEEEE-cC-CcceEEEEEECCC-----CeEEEC--CccCC-C--------cCCceE-EEEEEECCEEEEEEEecCCCCC
Confidence 999999 54 5678999999884 899986 34432 2 358996 56533 899999998753 3
Q ss_pred CccEEEEEEcCCCCCcEEcccccccCCCCCcee------cCceEEeccCCCCCccccCCCCCceeEEEEeeCC--CceeE
Q 010428 208 RKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWE------CPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD--TKHEY 279 (511)
Q Consensus 208 ~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~g~wE------CPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~--~~~~~ 279 (511)
+.|.|.+++|+||.+|+..+ ++..+..++||| ||+.|+++ + .|+|+++-.. .....
T Consensus 190 ~~~~I~~a~S~Dl~~W~~~~-~l~~~~~~~~wE~~~ig~gp~~i~~~--~-------------gwll~y~G~~~~~~~~~ 253 (338)
T 1vkd_A 190 PFGDIFLSESPDMIHWGNHR-FVLGRSSYNWWENLKIGAGPYPIETS--E-------------GWLLIYHGVTLTCNGYV 253 (338)
T ss_dssp SCCCEEEEEESSSSCBEEEE-EEECCCSSCGGGSSEEEECSCCEEET--T-------------EEEEEEEEEEEETTEEE
T ss_pred CCcEEEEEEcCCcccCCcCc-eEEcCCCCCCcccCccccCCCcEEeC--C-------------cEEEEEecccCCCCCcE
Confidence 56889999999999999754 444433334999 79999997 3 5777765321 12345
Q ss_pred EEEEE
Q 010428 280 YTVGT 284 (511)
Q Consensus 280 Y~iG~ 284 (511)
|.+|-
T Consensus 254 Y~~G~ 258 (338)
T 1vkd_A 254 YSFGA 258 (338)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77776
|
| >3qz4_A Endo-1,4-beta-xylanase D; 5-bladed beta-propeller fold, xylan degradation, structural joint center for structural genomics, JCSG; HET: EPE; 1.74A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.2e-23 Score=210.66 Aligned_cols=189 Identities=16% Similarity=0.223 Sum_probs=145.2
Q ss_pred CCccCCcceEEEC--CEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCC--CccCCCeEeeeEEEcC---C
Q 010428 56 NWINDPNGVMIYK--GIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQ--QSDINGCWSGSATILP---G 128 (511)
Q Consensus 56 gw~NDPnG~~~~~--G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~--~~D~~g~~SGsav~~~---d 128 (511)
||++||+ +++.+ |+||||+++.+. +.|+.++|.|++|+||+||+..+.+|.+.. .|+..++|+++++..+ +
T Consensus 13 g~~~DP~-i~~~~~dg~yyl~~t~~~~-~~~~~~~~~~~~S~DLv~W~~~g~~l~~~~~~~~~~~~~wAP~v~~~~~~~~ 90 (311)
T 3qz4_A 13 GFHADPE-VLYSHQTKRYYIYPTSDGF-PGWGGSYFKVFSSKNLKTWKEETVILEMGKNVSWANGNAWAPCIEEKKIDGK 90 (311)
T ss_dssp SSEEEEE-EEEETTTTEEEEEEEECSS-GGGCCCEECCEEESSSSSCEECCCCEEBTTTBTTEEEEEEEEEEEEEEETTE
T ss_pred CCcCCce-EEEECCCCEEEEEEecCCC-CCCCCcEEEEEECCCCCCcEECceecccccCCCcccCCcCCCeeEEeeecCC
Confidence 7899998 88887 999999998765 557788999999999999999999998764 5667899999998743 8
Q ss_pred CceEEEEeccCCC-CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCC-CCeEEEEEeeec
Q 010428 129 EKPAIFYTGIDPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGP-DKRWRVIIGSKI 206 (511)
Q Consensus 129 g~~~l~YTg~~~~-~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~-~g~w~m~~ga~~ 206 (511)
|+++|+||+.... ..+.+++|+|++.. -.|++ .++||+.... .+ ...++||++ |.++ +|++||++|+
T Consensus 91 Gkyylyyt~~~~~~~~~~i~va~s~~p~----Gpw~~-~~~p~~~~~~-~g--~~~~iDp~v-f~dd~dG~~yl~~g~-- 159 (311)
T 3qz4_A 91 YKYFFYYSANPTTNKGKQIGVAVADSPT----GPFTD-LGKPIITSSP-TG--RGQQIDVDV-FTDPVSGKSYLYWGN-- 159 (311)
T ss_dssp EEEEEEEEEEETTCSSCEEEEEEESSTT----CCCEE-CSSCSBCSCT-TS--SSBSCCCEE-EECTTTCCEEEEECB--
T ss_pred CEEEEEEEeccCCCCCeeEEEEEECCCC----CCceE-CCcceEcCCC-CC--CcccccccE-EEECCCCcEEEEEcC--
Confidence 9999999997542 35789999998763 36988 4678885430 22 246899995 5545 8999999986
Q ss_pred CCccEEEEEE-cCCCCCcEEcccccccCCC-----CCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCCC
Q 010428 207 NRKGLAILYR-SKDFVHWIKAKHPLHSVKG-----TGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDT 275 (511)
Q Consensus 207 ~~~G~i~ly~-S~Dl~~W~~~~~~l~~~~~-----~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~~ 275 (511)
|.+.+.+ |+|+.+|......+..+.. ..+.|||.+|+.+ | +++|++|....
T Consensus 160 ---~~i~~~~l~~d~~~~~~~~~~i~~~~~~~~~~~~~~EgP~i~k~~--g-------------~YyL~~s~~~~ 216 (311)
T 3qz4_A 160 ---GYMAGAELNDDMLSIKEETTVVLTPKGGTLQTYAYREAPYVIYRK--G-------------IYYFFWSVDDT 216 (311)
T ss_dssp ---SSCEEEEBCTTSSSBCGGGCEECCCCCCCTTTTCCCEEEEEEEET--T-------------EEEEEEEESCT
T ss_pred ---CCEEEEEeCCcccccCCCceEEeCCCCCcccccceeeccEEEEEC--C-------------EEEEEEEcCCC
Confidence 3466777 8898888632222222211 2479999999997 6 89999997643
|
| >3qc2_A Glycosyl hydrolase; 5-bladed beta propeller fold, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: PGE; 2.30A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.88 E-value=6.5e-22 Score=205.27 Aligned_cols=154 Identities=19% Similarity=0.329 Sum_probs=118.0
Q ss_pred cCCcceEEECCEEEEEeeeCCCCCC---CCCcEEEEEEeCCCCcceec-CCCCCCCCCccC-----CCeEeeeEEEcCCC
Q 010428 59 NDPNGVMIYKGIYHLFYQYNPKGAV---WGNIVWAHSTSKDLINWIPH-DPAIYPSQQSDI-----NGCWSGSATILPGE 129 (511)
Q Consensus 59 NDPnG~~~~~G~YHLFYQ~~P~~~~---~g~~~WgHa~S~DLvhW~~~-~~aL~P~~~~D~-----~g~~SGsav~~~dg 129 (511)
-.| ++++++|+||||||+++.... ++.++||||+|+|++||++. .++|.|+..++. .||++++++..+||
T Consensus 54 fnp-~ai~~dGky~LfY~~~~~~~~~~~~~~~~ig~A~S~DGi~w~~~~~Pvl~P~~~~~~~~e~~~gv~DP~v~~~edG 132 (364)
T 3qc2_A 54 FNP-AATLYNGEIVVLYRAEDKSGVGIGHRTSRLGYATSTDGTHFQREKTPVFYPDNDSQKELEWPGGCEDPRIAVTDDG 132 (364)
T ss_dssp EEE-EEEEETTEEEEEEEEECSSSSSTTCSCEEEEEEEESSSSSCEECSSCSBCCCSSTTHHHHTTTEEEEEEEEECTTS
T ss_pred ECc-eEEEECCEEEEEEEEECCCCcccCCCceEEEEEEeCCCceeeEcCcCeEcCCCccccccccCCcEECCEEEEeCCC
Confidence 346 788999999999999998654 47899999999999999996 478999987664 79999999875589
Q ss_pred ceEEEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEE--------E-eCCCCeEEE
Q 010428 130 KPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTA--------W-LGPDKRWRV 200 (511)
Q Consensus 130 ~~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vv--------w-~~~~g~w~m 200 (511)
+++|+||+.+. ..+.|++|+|+|. ++|+|. .+++.+.....+.....+|+.++ + ...+|+|+|
T Consensus 133 ~yym~Yta~~~-~~~~i~lA~S~Dl-----~~W~k~--g~i~~p~~~g~f~~~~~kd~~i~~~~r~~~lfp~ki~GkY~M 204 (364)
T 3qc2_A 133 LYVMMYTQWNR-HVPRLAVATSRNL-----KDWTKH--GPAFAKAFDGKFFNLGCKSGSILTEVVKGKQVIKKVNGKYFM 204 (364)
T ss_dssp CEEEEEEEECS-SCEEEEEEEESSS-----SSCEEE--EETTSSHHHHTTTTCCCCCEEEEEEEETTEEEECEETTEEEE
T ss_pred EEEEEEEecCC-CCeEEEEEEECCC-----CEEEEe--eeccCccccccccccccccceeeeeccccceeeEEECCEEEE
Confidence 99999999753 4678999999984 899997 36653310001112234676532 1 125899999
Q ss_pred EEeeecCCccEEEEEEcCCCCCcEEc
Q 010428 201 IIGSKINRKGLAILYRSKDFVHWIKA 226 (511)
Q Consensus 201 ~~ga~~~~~G~i~ly~S~Dl~~W~~~ 226 (511)
+++. +.|.+++|+||++|+..
T Consensus 205 ~~g~-----~~I~la~S~Dl~~W~~~ 225 (364)
T 3qc2_A 205 YWGE-----EHVFAATSDDLIHWTPI 225 (364)
T ss_dssp EECS-----SSBEEEEESSSSSEEEC
T ss_pred EEcC-----CeEEEEeCCCcccceEc
Confidence 9862 56889999999999874
|
| >3qee_A Beta-xylosidase/alpha-L-arabinfuranosidase, Gly43; 5-bladed beta propeller, hydrolase; 1.64A {Cellvibrio japonicus} PDB: 3qed_A* 3qef_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=3.8e-21 Score=195.20 Aligned_cols=201 Identities=14% Similarity=0.144 Sum_probs=147.0
Q ss_pred CCccCCcceEEECCEEEEEeeeCCCC---CCCCCcEEEEEEeCCCCcceecCCCCCCC-CCccCCCeEeeeEEEcCCCce
Q 010428 56 NWINDPNGVMIYKGIYHLFYQYNPKG---AVWGNIVWAHSTSKDLINWIPHDPAIYPS-QQSDINGCWSGSATILPGEKP 131 (511)
Q Consensus 56 gw~NDPnG~~~~~G~YHLFYQ~~P~~---~~~g~~~WgHa~S~DLvhW~~~~~aL~P~-~~~D~~g~~SGsav~~~dg~~ 131 (511)
.+.+||+.+ .++|+||||+++.+.. +.++...|.+++|+||+||+.++.+|.+. ..|+..++|+++++. .+|++
T Consensus 10 ~~~~DP~i~-~~~g~yYl~~t~~~~~~~~~~~~~~~~~v~~S~DLv~W~~~g~~l~~~~~~~~~~~~WAP~i~~-~~Gky 87 (307)
T 3qee_A 10 VFTADPAAL-VHKGRVYLYAGRDEAPDNTTFFVMNEWLVYSSDDMANWEAHGPGLRAKDFTWAKGDAWASQVIE-RNGKF 87 (307)
T ss_dssp SEEEEEEEE-EETTEEEEEEEEECCSSSSSCCCEEEEEEEEESSSSSCEEEEEEEEGGGSTTEEEEEEEEEEEE-ETTEE
T ss_pred CccCCCceE-EECCEEEEEEccCcccCCccccccCcEEEEECCCCCCceECccccccCCCCcccCCccCceEEE-ECCEE
Confidence 356999755 5899999999988753 45667899999999999999999988864 456678999999986 69999
Q ss_pred EEEEeccCCC--CcceEEEEEecCCCCcccceeeecCCCceecCCCCC-cCCCCCCCCCEEEEeCCCCeEEEEEeeecCC
Q 010428 132 AIFYTGIDPH--NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMN-QINTSSFRDPTTAWLGPDKRWRVIIGSKINR 208 (511)
Q Consensus 132 ~l~YTg~~~~--~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~-~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~ 208 (511)
+|+||+.... ..+.+++|+|++.. -.|++..++|++.....+ .....+++||++ |.+++|++||++|+.
T Consensus 88 ylyyt~~~~~~~~~~~i~va~s~~p~----Gpw~~~~~~pl~~~~~~~~~~~~~~~iDp~v-f~DddG~~Yl~~g~~--- 159 (307)
T 3qee_A 88 YWYVTVRHDDTKPGFAIGVAVGDSPI----GPFKDALGKALITNDMTTDTPIDWDDIDPSV-FIDDDGQAYLFWGNT--- 159 (307)
T ss_dssp EEEEEEEECTTSCSEEEEEEEESSTT----CCCEESSSSCSBCGGGCCSSCCSCCSCCCEE-EECTTSCEEEEECSS---
T ss_pred EEEEEeccCCCCCceEEEEEEECCCC----CCCEeCCCCeeEecCccccCCCCcCcccCce-EECCCCCEEEEEeCC---
Confidence 9999997542 24789999998754 369986567888532000 011235899995 555789999999874
Q ss_pred ccEEEEEEcCCCCCcEEcccccccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCCCceeEEEEEE
Q 010428 209 KGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVGT 284 (511)
Q Consensus 209 ~G~i~ly~S~Dl~~W~~~~~~l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~~~~~~Y~iG~ 284 (511)
+..++--|+|+.+|.-....+. ...+++|||.+|+.+ | +++|++|........|+..+
T Consensus 160 -~i~~~~l~~d~~~~~g~~~~i~--~~~~~~EgP~i~k~~--g-------------~YyL~~s~~~~~~~~~~~s~ 217 (307)
T 3qee_A 160 -RPRYAKLKKNMVELDGPIRAIE--GLPEFTEAIWVHKYQ--D-------------NYYLSYAMGFPEKIGYAMGK 217 (307)
T ss_dssp -SCEEEEECTTSSSEEEEEEECC--CCTTEEEEEEEEECC----------------CEEEEEEETTTTEEEEEEES
T ss_pred -cEEEEEECCccccccCceEEeC--CCCCccCceEEEEEC--C-------------EEEEEEECCCCcEEEEEECC
Confidence 2222333889998864322222 235689999999997 6 89999998655566666553
|
| >1gyh_A Arabinan endo-1,5-alpha-L-arabinosidase A; arabinanase, hydrolase, propeller, catalysis, pseudomonas; 1.89A {Cellvibrio cellulosa} SCOP: b.67.2.1 PDB: 1gyd_B 1gye_B* | Back alignment and structure |
|---|
Probab=99.84 E-value=9.3e-20 Score=185.47 Aligned_cols=182 Identities=18% Similarity=0.158 Sum_probs=132.3
Q ss_pred CccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCcc-------CCCeEeeeEEEcCCC
Q 010428 57 WINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSD-------INGCWSGSATILPGE 129 (511)
Q Consensus 57 w~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D-------~~g~~SGsav~~~dg 129 (511)
+++||+. ++++|+||||++. .+|.|++|+||+||+..+.||.+...|+ ..++|+++++. .+|
T Consensus 6 ~~~DP~i-~~~~g~yyl~~t~---------~~i~~~~S~DL~~W~~~g~~l~~~~~~~~~~~~~~~~~~wAP~v~~-~~g 74 (318)
T 1gyh_A 6 DVHDPVM-TREGDTWYLFSTG---------PGITIYSSKDRVNWRYSDRAFATEPTWAKRVSPSFDGHLWAPDIYQ-HKG 74 (318)
T ss_dssp CCSSCEE-EEETTEEEEEESE---------ETCEEEEESSSSEEEEEEESSSSCCTTHHHHCTTCCSEEEEEEEEE-ETT
T ss_pred ecCCCEE-EEECCEEEEEECC---------CCcEEEECCCCCCccCCCcccCCCcccccccCCCcCcccccCeEEE-ECC
Confidence 5789975 7889999999997 2599999999999999999998876665 47899999987 599
Q ss_pred ceEEEEeccCCC-CcceEEEEEecCCCCccc--ceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeec
Q 010428 130 KPAIFYTGIDPH-NRQVQNLAVPKNLSDPYL--REWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI 206 (511)
Q Consensus 130 ~~~l~YTg~~~~-~~q~q~lA~s~d~~d~~l--~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~ 206 (511)
+++|+||+.... ..+.+++|+|++. ||.. ..|++. ++|+... +.....+++||++ |.+++|++||++|+..
T Consensus 75 ~~ylyyt~~~~~~~~~~igva~s~~~-dp~gp~~~w~~~--~~v~~~~--~~~~~~~~iDp~v-f~D~dG~~Yl~~g~~~ 148 (318)
T 1gyh_A 75 LFYLYYSVSAFGKNTSAIGVTVNKTL-NPASPDYRWEDK--GIVIESV--PQRDLWNAIAPAI-IADDHGQVWMSFGSFW 148 (318)
T ss_dssp EEEEEEEECCTTSCCEEEEEEEESCS-CTTSTTCCCEEE--EEEEEEC--TTTCSSCCCCCEE-EECTTSCEEEEECBST
T ss_pred EEEEEEEeccCCCCcceEEEEEeCCC-CCCCCCcceecC--CcccccC--CCCCCCCcccCCe-EECCCCCEEEEeeccC
Confidence 999999987543 4577899999762 2211 139885 4677532 2222346899996 5447899999998742
Q ss_pred CCccEEEEEE-cCC------CCCcEEccc---c--ccc-CCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 010428 207 NRKGLAILYR-SKD------FVHWIKAKH---P--LHS-VKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (511)
Q Consensus 207 ~~~G~i~ly~-S~D------l~~W~~~~~---~--l~~-~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~ 273 (511)
+.|.+++ +.| +..|+.... + +.. .....++|||.+|+.+ | +++|++|..
T Consensus 149 ---~~i~~~~l~~d~~~~g~~~~w~~~~~~~~~~~~~~~~~~~~~~EgP~i~k~~--g-------------~yYL~~s~~ 210 (318)
T 1gyh_A 149 ---GGLKLFKLNDDLTRPAEPQEWHSIAKLERSVLMDDSQAGSAQIEAPFILRKG--D-------------YYYLFASWG 210 (318)
T ss_dssp ---TCEEEEEBCTTSSSBCSSCCEEEEECCCCCTTSCTTSCCSCCEEEEEEEEET--T-------------EEEEEEEES
T ss_pred ---CCEEEEEeCCccccccceeecceecccCcceeecccCCCCcceeccEEEEEC--C-------------EEEEEEEeC
Confidence 3466777 455 346765311 1 111 1234689999999997 6 899998864
|
| >3taw_A Hypothetical glycoside hydrolase; 5-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.70A {Parabacteroides distasonis} PDB: 3r67_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=4.4e-20 Score=191.27 Aligned_cols=149 Identities=19% Similarity=0.315 Sum_probs=115.1
Q ss_pred ccCCcceEEECCEEEEEeeeCCCCCC---CCCcEEEEEEeCCCCcceec-CCCCCCCCCcc-----CCCeEeeeEEEcCC
Q 010428 58 INDPNGVMIYKGIYHLFYQYNPKGAV---WGNIVWAHSTSKDLINWIPH-DPAIYPSQQSD-----INGCWSGSATILPG 128 (511)
Q Consensus 58 ~NDPnG~~~~~G~YHLFYQ~~P~~~~---~g~~~WgHa~S~DLvhW~~~-~~aL~P~~~~D-----~~g~~SGsav~~~d 128 (511)
+-+| ++++++|+||||||.++.... ++.++||||+|+|++||++. .++|.|+..++ ..+|++++++..+|
T Consensus 50 v~sg-sai~~dG~y~lfYtg~~~~~~~~~~~~~~ig~A~S~Dgi~w~~~~~pvl~p~~~~~~~~~~~~~~~DP~v~~~~d 128 (356)
T 3taw_A 50 TFNP-AATIYDGKIVVMYRAEDNSAQGIGSRTSRLGYATSTDGIHFERDTKPAFYPAKDNQAENECPGGTEDPRIAMTED 128 (356)
T ss_dssp EEEE-EEEEETTEEEEEEEEECSSSCSTTSSCEEECCEEESSSSSCEECSSCSBCCCSSTTHHHHTTTEEEEEEEEECTT
T ss_pred eECc-EEEEECCEEEEEEEEEcCCCccCCCceeEEEEEEeCCCccceECCcceecCCCccccccccCCceECCEEEEECC
Confidence 4456 678899999999999987643 35789999999999999995 57888887643 47999999987658
Q ss_pred CceEEEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCC-----CE----------EEEeC
Q 010428 129 EKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRD-----PT----------TAWLG 193 (511)
Q Consensus 129 g~~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRD-----P~----------vvw~~ 193 (511)
|+++|+||+.. .....+++|.|+|. ++|++. .+++.+. . ..+||| .. .+++
T Consensus 129 g~y~m~yt~~~-~~~~~i~la~S~Dl-----~~W~~~--g~i~~~~--~---~~~~~~~~~k~~~l~p~~~~g~p~v~k- 194 (356)
T 3taw_A 129 GTYVLLYTQWN-RKVPRLAVATSKDL-----KHWTKF--GPAFEKA--Y---NGKFKDEATKSASLVTTLKGDKQVIAK- 194 (356)
T ss_dssp SCEEEEEEEEC-SSCEEEEEEEESSS-----SSCEEE--EETTSSH--H---HHTTTTSCCCCEEEEEEEETTEEEECC-
T ss_pred CEEEEEEEEeC-CCCceEEEEECCCC-----CCceEe--eeEcCCc--c---ccccccccCCccEEeecccCCCceEEE-
Confidence 99999999975 34578999999984 899986 3666432 1 122333 22 1344
Q ss_pred CCCeEEEEEeeecCCccEEEEEEcCCCCCcEEc
Q 010428 194 PDKRWRVIIGSKINRKGLAILYRSKDFVHWIKA 226 (511)
Q Consensus 194 ~~g~w~m~~ga~~~~~G~i~ly~S~Dl~~W~~~ 226 (511)
.+|+|+|++|. +.|.+++|+||.+|+..
T Consensus 195 ~~G~y~m~~g~-----~~I~la~S~Dl~~W~~~ 222 (356)
T 3taw_A 195 VNGKYFMYWGE-----KNVYAATSDNLIDWDPL 222 (356)
T ss_dssp BTTBEEEEECS-----SSBEEEEESSSSSCEEC
T ss_pred ECCEEEEEeCC-----ceeeEEECCCcccCeec
Confidence 68999999972 45899999999999974
|
| >1uv4_A Arabinase, arabinan-endo 1,5-alpha-L-arabinase; hydrolase, propeller, catalysis; 1.50A {Bacillus subtilis} SCOP: b.67.2.1 | Back alignment and structure |
|---|
Probab=99.83 E-value=3.1e-19 Score=179.48 Aligned_cols=183 Identities=16% Similarity=0.134 Sum_probs=132.4
Q ss_pred CccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCcc-------CCCeEeeeEEEcCCC
Q 010428 57 WINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSD-------INGCWSGSATILPGE 129 (511)
Q Consensus 57 w~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D-------~~g~~SGsav~~~dg 129 (511)
+++||+ +++++|+||||++..+. ..+|.+++|+||+||+..+.||.+...|+ ..++|+++++. .+|
T Consensus 11 ~~~DP~-i~~~~g~yYl~~t~~~~-----~~~i~i~~S~DLv~W~~~g~~l~~~~~w~~~~~~~~~~~~wAP~v~~-~~G 83 (293)
T 1uv4_A 11 LLHDPT-MIKEGSSWYALGTGLTE-----ERGLRVLKSSDAKNWTVQKSIFTTPLSWWSNYVPNYGQNQWAPDIQY-YNG 83 (293)
T ss_dssp ECSSCE-EEEETTEEEEEEECCTT-----SSBEEEEEESSSSSCEEEEEETSSCCGGGGGTSTTCCSBCEEEEEEE-ETT
T ss_pred cCCCCe-EEEECCEEEEEEcCCCC-----CCceEEEECCCCCCccCCCccCCCCCcccccccccCCCceecceEEE-ECC
Confidence 468997 45679999999998763 34799999999999999999888775443 36899999987 599
Q ss_pred ceEEEEeccCCC-CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCC
Q 010428 130 KPAIFYTGIDPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINR 208 (511)
Q Consensus 130 ~~~l~YTg~~~~-~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~ 208 (511)
+++|+||+.... ..+.+++|+|+|.. .-.|++. .++|..+ +. ...+++||.+ |.+++|++||++|+..
T Consensus 84 ~yylyyt~~~~~~~~~~i~va~s~~p~---~Gpw~~~--~~~l~~~--~~-~~~~~iDp~v-f~d~dG~~Yl~~g~~~-- 152 (293)
T 1uv4_A 84 KYWLYYSVSSFGSNTSAIGLASSTSIS---SGGWKDE--GLVIRST--SS-NNYNAIDPEL-TFDKDGNPWLAFGSFW-- 152 (293)
T ss_dssp EEEEEEEECCTTCSCEEEEEEEESCTT---TTCCEEE--EEEEEEC--TT-SSSCCCSCEE-EECTTSCEEEEECBST--
T ss_pred EEEEEEEecCCCCCcceEEEEECCCCC---CCCCccC--CccEecC--CC-CCCCCCCCCe-EECCCCCEEEEEEecC--
Confidence 999999987542 45678999998752 0269885 3455332 11 2346899996 4447899999998742
Q ss_pred ccEEEEEE-cCCCCCcEEcccccc-cCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 010428 209 KGLAILYR-SKDFVHWIKAKHPLH-SVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (511)
Q Consensus 209 ~G~i~ly~-S~Dl~~W~~~~~~l~-~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~ 273 (511)
+.|.+++ +.|+..+.-....+. ......++|||.+|+.+ | +++|++|..
T Consensus 153 -~~i~~~~l~~d~~~~~g~~~~i~~~~~~~~~~EgP~i~k~~--g-------------~yyL~~s~~ 203 (293)
T 1uv4_A 153 -SGIKLTKLDKSTMKPTGSLYSIAARPNNGGALEAPTLTYQN--G-------------YYYLMVSFD 203 (293)
T ss_dssp -TCEEEEEECTTTCSEEEEEEEEECCTTTTTCEEEEEEEEET--T-------------EEEEEEEEE
T ss_pred -CCEEEEEECchhCccCCcceEEeecCCCCCccCccEEEEEC--C-------------EEEEEEEeC
Confidence 3366777 678766532111122 22235689999999997 6 899998864
|
| >3vss_A Beta-fructofuranosidase; glycoside hydrolase family 68, beta-propeller, hydrolase; HET: FRU; 1.97A {Arthrobacter} PDB: 3vsr_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2.1e-20 Score=199.47 Aligned_cols=198 Identities=15% Similarity=0.083 Sum_probs=135.6
Q ss_pred cCCcc-eEEECCEEEEEeeeCCCCCCC----CCcEEEEEEe---------CCCCcceecCCCCCCCC--------CccCC
Q 010428 59 NDPNG-VMIYKGIYHLFYQYNPKGAVW----GNIVWAHSTS---------KDLINWIPHDPAIYPSQ--------QSDIN 116 (511)
Q Consensus 59 NDPnG-~~~~~G~YHLFYQ~~P~~~~~----g~~~WgHa~S---------~DLvhW~~~~~aL~P~~--------~~D~~ 116 (511)
.|+.| ++-++|..++|++..|....+ ....+||..| .|+.+|+..+.++.++. .++..
T Consensus 81 qd~~g~~~~~~Gy~lvf~L~a~~~~~~~drH~~a~iglfy~k~G~~~~~s~d~~~W~~~G~vf~~~~~~~~~~~~~~~~~ 160 (496)
T 3vss_A 81 TDEDANQYSVNGWEIIFSLVADRNLGFDDRHVFAKIGYFYRPAGVPAAERPENGGWTYGGLVFKEGVTGQIFEDQSFSHQ 160 (496)
T ss_dssp ECTTCCBEEETTEEEEEEEEEETTSCGGGGGGGCEEEEEEEESSCCTTTSCTTCCCEEEEESSCTTSGGGGCSCTTCSEE
T ss_pred ECCCCCEEEECCEEEEEEEEcCCCCCCCcCcceeEEeeeeccCCcccccCcccCCcEECccccCCCCCcccccCCCccCC
Confidence 46766 666899999999987654433 3566789654 56679999988776542 12333
Q ss_pred CeEeeeEEEcCCCceEEEEeccCC--------CCcceEEEEEecCC--CCcccceeeecCCCceecCCCC------CcCC
Q 010428 117 GCWSGSATILPGEKPAIFYTGIDP--------HNRQVQNLAVPKNL--SDPYLREWVKSPKNPLMAPDAM------NQIN 180 (511)
Q Consensus 117 g~~SGsav~~~dg~~~l~YTg~~~--------~~~q~q~lA~s~d~--~d~~l~~w~K~~~nPVi~~p~~------~~~~ 180 (511)
.-|||||++.+||+++||||++.. ...+.|+||++... .+...++|++...+++|-.++. +...
T Consensus 161 ~eWSGSAi~~~DG~i~LFYT~v~~~~~~~g~~~~~~~Q~ia~A~~~i~~d~dgv~~~~~~~~~~l~~~DG~~Yqt~~q~~ 240 (496)
T 3vss_A 161 TQWSGSARVSKNGEIKLFFTDVAFYRNSDGTNIKPYDPRIALSVGKVKANKKGVTLTGFNKVTDLLQADGTYYQTGAQNE 240 (496)
T ss_dssp EEEEEEEEECTTCEEEEEEEEEEECBCTTSCBSSCCEEEEEEEEEEEEEETTEEEEEEEEEEEEEECCCSSSBCCTTTCT
T ss_pred ceEecceEECCCCeEEEEEEEeecccCCCccccccceeEEEEEeeeeeecCCcceEeccCCCcccccCChhhhhcccccc
Confidence 469999998889999999998632 12356777764310 0111267888777777744321 1123
Q ss_pred CCCCCCCEEEEeC--CCCeEEEEEeeecC-----------------------------------CccEEEEE--EcCCCC
Q 010428 181 TSSFRDPTTAWLG--PDKRWRVIIGSKIN-----------------------------------RKGLAILY--RSKDFV 221 (511)
Q Consensus 181 ~~~fRDP~vvw~~--~~g~w~m~~ga~~~-----------------------------------~~G~i~ly--~S~Dl~ 221 (511)
..+||||+| |++ ++|.+||++.+... ..|+|.|+ +|+|+.
T Consensus 241 ~~~fRDP~v-f~DP~~dG~~YLVFEgnT~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~anG~IGLa~~~s~D~~ 319 (496)
T 3vss_A 241 FFNFRDPFT-FEDPAHPGETFMVFEGNSAMQRETATCNEADLGYRQGDPYAETVDDVNASGATYQIGNVGLAKAKNKQLT 319 (496)
T ss_dssp TCCCEEEEE-ECCTTSTTCCEEEEEEEBSSCGGGCCCCHHHHCCCTTCTTCCCHHHHHHHTGGGCEEEEEEEEESSTTSC
T ss_pred ccccCCCee-EecCCCCCcEEEEEecccCCcCccccccccccccccccccccccccccccccccccceEEEEEccCCCCC
Confidence 467999995 554 47889999877541 13666554 689999
Q ss_pred CcEEcccccccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEee
Q 010428 222 HWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSL 272 (511)
Q Consensus 222 ~W~~~~~~l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~ 272 (511)
.|++.++++.......|||||++|+++ | ||+|+.+.
T Consensus 320 ~We~~~PL~~a~~v~deiErP~vf~~d--G-------------KyYLFt~s 355 (496)
T 3vss_A 320 EWEFLPPILSANCVTDQTERPQIYFKD--G-------------KSYLFTIS 355 (496)
T ss_dssp CEEEEEEEEEEETTBSCCEEEEEEEET--T-------------EEEEEEEE
T ss_pred ccEEeCccccCCCCCCceeCCcEEEEC--C-------------EEEEEEec
Confidence 999986444444456799999999998 6 99998874
|
| >3kst_A Endo-1,4-beta-xylanase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.7e-19 Score=183.00 Aligned_cols=179 Identities=16% Similarity=0.167 Sum_probs=134.1
Q ss_pred CCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCccCCCeEeeeEEE-cCCCceEEE
Q 010428 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATI-LPGEKPAIF 134 (511)
Q Consensus 56 gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D~~g~~SGsav~-~~dg~~~l~ 134 (511)
=...||+. ++++|+||||++..+. ...+|.+++|+||+||+..+.+|.+...++..++|+++++. ..+|+++|+
T Consensus 22 ~~~~DP~i-~~~~g~yyl~~t~~~~----~~~~i~~~~S~DLv~W~~~g~~l~~~~~~~~~~~wAP~v~~~~~~g~~yl~ 96 (306)
T 3kst_A 22 LPIADPYV-MFYNNKYYAYGTGGTT----AGEGFACFSSDDLKNWKREGQALSATDSYGTWGFWAPEVYYVESKKKFYLF 96 (306)
T ss_dssp BCCEEEEE-EEETTEEEEEEESCCS----SSSEEEEEEESSSSEEEEEEEEEEGGGSSCSSCCEEEEEEEETTTTEEEEE
T ss_pred ccCCCCEE-EEECCEEEEEEecCCc----CCCCEEEEEeCCccccEECceecCCCCcccccccccCeEEEECCCCEEEEE
Confidence 34779974 5679999999997653 23479999999999999999999887777888999999864 359999999
Q ss_pred EeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCccEEEE
Q 010428 135 YTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAIL 214 (511)
Q Consensus 135 YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~l 214 (511)
||+. +.+++|+|++.. -.|++....|++. ...+||.+ |.+++|++||+++...++.+ |.+
T Consensus 97 yt~~-----~~i~va~s~~p~----Gpw~~~~~~p~~~---------~~~iDp~v-f~D~dG~~Yl~~~~~~~g~~-i~~ 156 (306)
T 3kst_A 97 YSAE-----EHICVATSTTPE----GPFRQEVKQPIWS---------EKSIDTSL-FIDDDGTPYLYFVRFTDGNV-IWV 156 (306)
T ss_dssp EEET-----TEEEEEEESSTT----CCCBCSSCCCSSS---------SCCEEEEE-EECTTSCEEEEEEEESSSEE-EEE
T ss_pred EECC-----CcEEEEEcCCCC----CCcEeCCCccccC---------CCcccceE-EEeCCCCEEEEEEEeCCCCE-EEE
Confidence 9986 368999998764 3588765556653 34799995 55578999999986543333 555
Q ss_pred EE-cCCCCCcEEcccc-cccC------CCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCC
Q 010428 215 YR-SKDFVHWIKAKHP-LHSV------KGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD 274 (511)
Q Consensus 215 y~-S~Dl~~W~~~~~~-l~~~------~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~ 274 (511)
.+ |+|+.+|...... +... ....++|||.+|+.+ | +++|++|...
T Consensus 157 ~~ls~d~~~~~~~~~~~~~~~~~~w~~~~~~~~EgP~i~k~~--G-------------~YYL~~S~~~ 209 (306)
T 3kst_A 157 AQMTDDLMSIKTETLNQCIKAEVSWELLQGKVAEGPSLLKKN--G-------------VYYLIYSANH 209 (306)
T ss_dssp EEBCTTSSCBCGGGCEEEECCCSGGGCSSSSBEEEEEEEEET--T-------------EEEEEEEESC
T ss_pred EEeCcccccccCcceeeeccCCccceecCCCceecceEEEEC--C-------------EEEEEEEeCC
Confidence 55 8999998632211 1111 125699999999997 6 8999998754
|
| >3cu9_A Intracellular arabinanase; glycosyl hydrolase, high resolution, beta-prope geobacillus stearothermophilus, hydrolase; HET: GOL; 1.06A {Geobacillus stearothermophilus} PDB: 3d61_A* 3d60_A 3d5y_A 3d5z_A* 1wl7_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.8e-18 Score=175.61 Aligned_cols=181 Identities=18% Similarity=0.156 Sum_probs=129.4
Q ss_pred CCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCcc--------CCCeEeeeEEEcC
Q 010428 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSD--------INGCWSGSATILP 127 (511)
Q Consensus 56 gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D--------~~g~~SGsav~~~ 127 (511)
.+++||+ +++++|+||||++. .+|++++|+||+||+..+.+|.+...|+ ..++|+++++. .
T Consensus 22 ~~~~DP~-i~~~~g~yYl~~t~---------~~i~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~~~wAP~v~~-~ 90 (314)
T 3cu9_A 22 LWAHDPV-IAKEGSRWYVFHTG---------SGIQIKTSEDGVHWENMGWVFPSLPDWYKQYVPEKDEDHLWAPDICF-Y 90 (314)
T ss_dssp CBCSSCE-EEEETTEEEEEESE---------ETSEEEEESSSSEEEEEEESCSSCCTTHHHHCTTCCSCEEEEEEEEE-E
T ss_pred cCcCCCE-EEEECCEEEEEECC---------CCeeEEECcCCCCccCCCcccCCcchhhhccCCCcccCceecCcEEE-E
Confidence 4589996 57889999999987 2589999999999999999998876554 47899999987 4
Q ss_pred CCceEEEEeccCCC-CcceEEEEEecCCCCccc--ceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEee
Q 010428 128 GEKPAIFYTGIDPH-NRQVQNLAVPKNLSDPYL--REWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGS 204 (511)
Q Consensus 128 dg~~~l~YTg~~~~-~~q~q~lA~s~d~~d~~l--~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga 204 (511)
+|+++|+||+.... ..+.+++|+|++. +|.. .+|++. .+|+..+ .. ...+++||.+ |.+++|++||++++
T Consensus 91 ~g~yylyyt~~~~~~~~~~igva~s~~~-dP~gp~~~w~~~--~~~~~~~--~~-~~~~~iDp~v-f~D~dG~~Yl~~g~ 163 (314)
T 3cu9_A 91 NGIYYLYYSVSTFGKNTSVIGLATNQTL-DPRDPDYEWKDM--GPVIHST--AS-DNYNAIDPNV-VFDQEGQPWLSFGS 163 (314)
T ss_dssp TTEEEEEEEECCTTCCCEEEEEEEESCS-CTTSTTCCCEEE--EEEEEEC--TT-SSSCCCSCEE-EECTTSCEEEEECB
T ss_pred CCEEEEEEEeccCCCCCceEEEEEeCCC-CCCCCCcCcccC--CeEecCC--CC-CCCCccCCCe-EEcCCCCEEEEEec
Confidence 99999999987542 4577899999762 2221 139885 4666433 11 2246899996 55478999999987
Q ss_pred ecCCccEEEEEE-cCCCCC----cEEcccccccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 010428 205 KINRKGLAILYR-SKDFVH----WIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (511)
Q Consensus 205 ~~~~~G~i~ly~-S~Dl~~----W~~~~~~l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~ 273 (511)
.. +.|.+++ +.|... |+.. .+........++|||.+|+.+ | +++|++|..
T Consensus 164 ~~---~~i~~~~l~~d~~~~~~~~~~~-~~~~~~~~~~~~EgP~i~k~~--G-------------~yyL~~s~~ 218 (314)
T 3cu9_A 164 FW---SGIQLIQLDTETMKPAAQAELL-TIASRGEEPNAIEAPFIVCRN--G-------------YYYLFVSFD 218 (314)
T ss_dssp ST---TCEEEEECCTTTCSCCTTCCCE-EEECCSSSSCCEEEEEEEEET--T-------------EEEEEEEES
T ss_pred cC---CcEEEEEECcccCcccCCCceE-EecccCCCCCccCccEEEEEC--C-------------EEEEEEEcC
Confidence 42 2366777 444332 3211 111111234689999999997 6 899998864
|
| >3p2n_A 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-propeller, glycoside hydrolase family GH117, agaro-oligosaccharides, CARB hydrolase; 1.95A {Zobellia galactanivorans} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.8e-16 Score=166.85 Aligned_cols=153 Identities=16% Similarity=0.179 Sum_probs=114.4
Q ss_pred ccCCcceEEECCEEEEEeeeCC--CCCC-CCCcEEEEEEeCCCCcceecCC-CCCCC------------------CCccC
Q 010428 58 INDPNGVMIYKGIYHLFYQYNP--KGAV-WGNIVWAHSTSKDLINWIPHDP-AIYPS------------------QQSDI 115 (511)
Q Consensus 58 ~NDPnG~~~~~G~YHLFYQ~~P--~~~~-~g~~~WgHa~S~DLvhW~~~~~-aL~P~------------------~~~D~ 115 (511)
+.+|. +++++|+|||||+.+. .+.. .+.+.+++|.|+|++ |++++. ++.|. ..||.
T Consensus 170 v~aPs-Vi~~dGkYyL~Yt~~~~~~~~~~~~~i~va~A~S~DG~-W~~~~~pli~~~~~~~~~~e~d~~~~~~~~~~wd~ 247 (408)
T 3p2n_A 170 VFTVE-IMKWEDKYYLCYQTVKSPYNVRVKNQVGLAWADSPDGP-WTKSEEPILSPADNGVWKGEEQDRFAVIKKGDFDS 247 (408)
T ss_dssp EEEEE-EEEETTEEEEEEEEECSSCCTTCCCEEEEEEESSTTCC-CEECSSCSBCCCSCCEECSSSCCTTCEEECCSTTS
T ss_pred eEeeE-EEEECCEEEEEEEeecCCCCCcCCCceEEEEEECCCCC-EEECCcceeCCCCCceEEEecCCcccccccceecC
Confidence 45784 7789999999999863 2222 346899999999999 999864 44443 46777
Q ss_pred CCeEeeeEEEcCCCceEEEEeccCC-------CCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCE
Q 010428 116 NGCWSGSATILPGEKPAIFYTGIDP-------HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPT 188 (511)
Q Consensus 116 ~g~~SGsav~~~dg~~~l~YTg~~~-------~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~ 188 (511)
.+++.++++. .+|+++|+|++... .+.+.|++|+|+|.. -.|+|.+.|||+... .||+
T Consensus 248 ~~v~~P~v~~-~~G~yyl~Ys~~~~g~~~~~~~~~~~igvA~Sdd~~----Gpw~k~~~nPVl~~~----------~dp~ 312 (408)
T 3p2n_A 248 HKVHDPCIIP-YKGKFYLYYKGEQMGEAITFGGRQIRHGVAIADNPK----GPYVKSPYNPISNSG----------HEIC 312 (408)
T ss_dssp SEEEEEEEEE-ETTEEEEEEEEECTTCCEETTEECCEEEEEEESSTT----CCCEECTTCCSCSSC----------SSCC
T ss_pred CCeEcceEEE-ECCEEEEEEEcccCccccccCCCccEEEEEEECCCC----CCcEECCCCCcccCC----------CCCe
Confidence 7898888876 69999999999753 124789999998863 369998889999533 3798
Q ss_pred EEEeCCCCeEEEEEeeecCCccEEEEEEcCCCCCcEEcccccc
Q 010428 189 TAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLH 231 (511)
Q Consensus 189 vvw~~~~g~w~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~ 231 (511)
+|++++|.|+|+. . ++.|.+.+|+|+|+++|++.+.+..
T Consensus 313 -Vw~~~dG~y~mi~-~--~g~gh~~i~~S~Dg~~W~~~~~i~~ 351 (408)
T 3p2n_A 313 -VWPYNGGIASLIT-T--DGPEKNTIQWAPDGINFEIKSVIPG 351 (408)
T ss_dssp -EEEETTEEEEEEC-S--SSTTCSEEEEESSSSCCEEEEECSC
T ss_pred -eEecCCCEEEEEE-E--CCCCcEEEEECCCCCEEEEEeeccc
Confidence 5876677777763 2 3445555789999999999876543
|
| >1yrz_A Xylan beta-1,4-xylosidase; structural genomics, nysgxrc target T1997, PSI, structure initiative; 2.00A {Bacillus halodurans} SCOP: b.29.1.23 b.67.2.1 | Back alignment and structure |
|---|
Probab=99.69 E-value=3.1e-16 Score=170.28 Aligned_cols=178 Identities=17% Similarity=0.163 Sum_probs=128.0
Q ss_pred CCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCcc------CCCeEeeeEEEcCCC
Q 010428 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSD------INGCWSGSATILPGE 129 (511)
Q Consensus 56 gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D------~~g~~SGsav~~~dg 129 (511)
|+++||+ +++++|+||||++..+.. ..|.+++|+||+||+..+.+|.+...++ ..|+|+++++. .+|
T Consensus 12 g~~~DP~-i~~~~~~yY~~~s~~~~~-----~gi~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~wAP~i~~-~~g 84 (528)
T 1yrz_A 12 GFHPDPS-IVRVGDDYYIATSTFEWF-----PGVRIHHSRDLKHWRFVSSPLTRTSQLDMKGNMNSGGIWAPCLSY-HDG 84 (528)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBTEE-----SBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEECSCEEEE-ETT
T ss_pred CCCCCCe-EEEECCEEEEEEccCccC-----CCeEEEECCCccCceECccccCCcccccccCCCCCCCEECCeEEE-ECC
Confidence 6899996 788999999999865422 3589999999999999999887764332 46899999987 699
Q ss_pred ceEEEEeccCC--C--CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEE---E
Q 010428 130 KPAIFYTGIDP--H--NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVI---I 202 (511)
Q Consensus 130 ~~~l~YTg~~~--~--~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~---~ 202 (511)
++||+||+... . +.+.+++|+|+|..+ .|++ |+... ...+||.+++ +++|++||+ +
T Consensus 85 ~~yl~yt~~~~~~g~~~~~~~~va~s~~p~G----pw~~----p~~~~--------~~~iDp~vf~-D~dG~~Yl~~~~~ 147 (528)
T 1yrz_A 85 TFYLIYTDVKQWHGAFKDAHNYLVTAQNIEG----PWSD----PIYLN--------SSGFDPSLFH-DDDGRKWLVNMIW 147 (528)
T ss_dssp EEEEEEEEEEECSSSCCEEEEEEEEESSSSS----CCCC----CEECC--------CSCSCCEEEE-CTTSCEEEEEEEE
T ss_pred EEEEEEecccCCCCCcccceEEEEEeCCCCC----Cccc----cEECC--------CCcCCCceEE-CCCCCEEEEEeec
Confidence 99999997532 1 235588999987532 4764 44321 2469999654 478999999 5
Q ss_pred eeecC--CccEEEEEE-cCCCCCcEEccc--ccccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCC
Q 010428 203 GSKIN--RKGLAILYR-SKDFVHWIKAKH--PLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD 274 (511)
Q Consensus 203 ga~~~--~~G~i~ly~-S~Dl~~W~~~~~--~l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~ 274 (511)
+++.. ..+.|.+++ +.|. ++..++ .+.......++|||.+|+.+ | +|+|++|...
T Consensus 148 ~~~~~~~~~~~i~~~~l~~d~--~~~~g~~~~i~~~~~~~~~EgP~i~k~~--G-------------~YYL~~s~~g 207 (528)
T 1yrz_A 148 DYRKGNHPFAGIILQEYSEAE--QKLVGPVKNIYKGTDIQLTEGPHLYKKD--G-------------YYYLLVAEGG 207 (528)
T ss_dssp CCCTTSCSEEEEEEEEEETTT--TEEEEEEEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEESC
T ss_pred cCCCCCCCCCeEEEEEECCcc--CCCCCCCEEEEcCCCCCccCCCEEEEEC--C-------------EEEEEEeCCC
Confidence 55432 235677887 5664 444333 23333334589999999997 6 8888888653
|
| >3taw_A Hypothetical glycoside hydrolase; 5-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.70A {Parabacteroides distasonis} PDB: 3r67_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=4.6e-16 Score=161.11 Aligned_cols=121 Identities=17% Similarity=0.236 Sum_probs=96.8
Q ss_pred ceecC---CCCCCCC------------CccCCCeEeeeEEEcCCCceEEEEeccCCC------CcceEEEEEecCCCCcc
Q 010428 100 WIPHD---PAIYPSQ------------QSDINGCWSGSATILPGEKPAIFYTGIDPH------NRQVQNLAVPKNLSDPY 158 (511)
Q Consensus 100 W~~~~---~aL~P~~------------~~D~~g~~SGsav~~~dg~~~l~YTg~~~~------~~q~q~lA~s~d~~d~~ 158 (511)
|++.+ ++|.|.. .||+.|||+|+|+. .+|+++||||++... +.+.|++|+|+|+
T Consensus 17 f~R~~~~nPIl~p~~~~~~~~~~~~~~~~D~~gv~sgsai~-~dG~y~lfYtg~~~~~~~~~~~~~~ig~A~S~Dg---- 91 (356)
T 3taw_A 17 FERPTGVNPVIKPLPTKFYCPMREDSVAWEESDTFNPAATI-YDGKIVVMYRAEDNSAQGIGSRTSRLGYATSTDG---- 91 (356)
T ss_dssp CBCCTTTCCSBCCCCCEEEETTTTEEEETTSSEEEEEEEEE-ETTEEEEEEEEECSSSCSTTSSCEEECCEEESSS----
T ss_pred eeeCCCCCCeEccCCccccCcccccCCccccCCeECcEEEE-ECCEEEEEEEEEcCCCccCCCceeEEEEEEeCCC----
Confidence 66653 5888876 68999999999987 599999999998642 4688999999985
Q ss_pred cceeeecCCCceecCCCCCcCC-----CCCCCCCEEEEeCCCCeEEEEEeeecCCccEEEEEEcCCCCCcEEccccc
Q 010428 159 LREWVKSPKNPLMAPDAMNQIN-----TSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPL 230 (511)
Q Consensus 159 l~~w~K~~~nPVi~~p~~~~~~-----~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l 230 (511)
++|+|.+ +|||.+. +..+ ..++|||+| ++.++|+|+|++++..+..+.+.+|+|+|+.+|++.+.++
T Consensus 92 -i~w~~~~-~pvl~p~--~~~~~~~~~~~~~~DP~v-~~~~dg~y~m~yt~~~~~~~~i~la~S~Dl~~W~~~g~i~ 163 (356)
T 3taw_A 92 -IHFERDT-KPAFYPA--KDNQAENECPGGTEDPRI-AMTEDGTYVLLYTQWNRKVPRLAVATSKDLKHWTKFGPAF 163 (356)
T ss_dssp -SSCEECS-SCSBCCC--SSTTHHHHTTTEEEEEEE-EECTTSCEEEEEEEECSSCEEEEEEEESSSSSCEEEEETT
T ss_pred -ccceECC-cceecCC--CccccccccCCceECCEE-EEECCCEEEEEEEEeCCCCceEEEEECCCCCCceEeeeEc
Confidence 7999974 7999654 2222 368999996 4535889999998766557889999999999999987544
|
| >3c7f_A Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta-propeller fold, beta-sandwich, xylan degradati hydrolase; HET: XYP; 1.55A {Bacillus subtilis} PDB: 3c7e_A* 3c7h_A* 3c7o_A* 3c7g_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=7.7e-15 Score=157.83 Aligned_cols=187 Identities=14% Similarity=0.220 Sum_probs=131.0
Q ss_pred CccCCcceEEECCEEEEEeeeCCC-----C-----CCCCCcEEEEEEeCCCCcceecCCCCCCCC----------CccCC
Q 010428 57 WINDPNGVMIYKGIYHLFYQYNPK-----G-----AVWGNIVWAHSTSKDLINWIPHDPAIYPSQ----------QSDIN 116 (511)
Q Consensus 57 w~NDPnG~~~~~G~YHLFYQ~~P~-----~-----~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~----------~~D~~ 116 (511)
+..||. +++++|+||||..+... + .......|.+++|+||+||+.++.++.+.. .|. .
T Consensus 21 ~~~DP~-i~~~~g~yYly~t~~~~~~~~~g~~~~~~~~~~~~i~i~~S~DLv~W~~~g~v~~~~~~~~~~g~~~~~w~-~ 98 (487)
T 3c7f_A 21 LGADPV-ALTYNGRVYIYMSSDDYEYNSNGTIKDNSFANLNRVFVISSADMVNWTDHGAIPVAGANGANGGRGIAKWA-G 98 (487)
T ss_dssp CCEEEE-EEEETTEEEEEEECCCCEECTTSCEECCCSTTCCSEEEEEESSSSSEEEEEEECCBCSTTGGGGTCSBTTC-S
T ss_pred cCCCCC-eEEECCEEEEEEcCCcccccccccccccccccccceEEEECCCCcCcEEccccccCCcccccccccccCcc-c
Confidence 578995 66789999999998642 1 122346799999999999999988776642 232 4
Q ss_pred CeEeeeEEEc-CC--CceEEEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCC-CCCCCCCEEEEe
Q 010428 117 GCWSGSATIL-PG--EKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQIN-TSSFRDPTTAWL 192 (511)
Q Consensus 117 g~~SGsav~~-~d--g~~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~-~~~fRDP~vvw~ 192 (511)
++|.++++.. .+ |++||+||... +.+++|+|+|..+ .|++..+.|++.... ++.. ....+||.+++
T Consensus 99 ~~WAP~v~~~~~~g~g~yylyyt~~~----~~i~va~s~~p~G----pw~~~~g~pli~~~~-~g~~~~~~~iDp~vf~- 168 (487)
T 3c7f_A 99 ASWAPSIAVKKINGKDKFFLYFANSG----GGIGVLTADSPIG----PWTDPIGKPLVTPST-PGMSGVVWLFDPAVFV- 168 (487)
T ss_dssp CCEEEEEEEEEETTEEEEEEEEESTT----BCEEEEEESSTTC----CCBCSSSSCSBCTTS-TTCTTCSSBCCCEEEE-
T ss_pred cCcchheEEEecCCCCeEEEEEEcCC----cEEEEEEeCCCCC----CcccCCCCeEeecCC-CCccCCCCccCCceEE-
Confidence 7999999863 13 69999999753 5789999988643 488755678885320 2211 23579999654
Q ss_pred CCCCeEEEEEeeecC-----------CccEEEEE-EcCCCCCcEEcccccccCCCCCceecCceEEeccCCCCCccccCC
Q 010428 193 GPDKRWRVIIGSKIN-----------RKGLAILY-RSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDM 260 (511)
Q Consensus 193 ~~~g~w~m~~ga~~~-----------~~G~i~ly-~S~Dl~~W~~~~~~l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~ 260 (511)
++||++||++|+... ....+.+. -++|+..|+.....+. ...+.|+|.+++.+ |
T Consensus 169 DddG~~Yl~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~g~~~~i~---~p~~~Egp~i~k~~--G--------- 234 (487)
T 3c7f_A 169 DDDGTGYLYAGGGVPGVSNPTQGQWANPKTARVIKLGPDMTSVVGSASTID---APFMFEDSGLHKYN--G--------- 234 (487)
T ss_dssp CTTSCEEEEEECCCSSTTSCCHHHHHCCCCEEEEEECTTSSSEEEEEEEEC---CTTEEEEEEEEEET--T---------
T ss_pred cCCCCEEEEECCcccCccccccccccCCCceEEEEECCCeeeccCccEEec---CCceEecceEEEEC--C---------
Confidence 478999999987531 11234454 4899999975332222 23589999999997 6
Q ss_pred CCCceeEEEEeeC
Q 010428 261 GPNTKHVLKVSLD 273 (511)
Q Consensus 261 ~~~~k~vL~~S~~ 273 (511)
+|+|.+|..
T Consensus 235 ----~YYl~ys~~ 243 (487)
T 3c7f_A 235 ----TYYYSYCIN 243 (487)
T ss_dssp ----EEEEEEEEC
T ss_pred ----EEEEEEECC
Confidence 788877764
|
| >3nqh_A Glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.11A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.63 E-value=3.7e-15 Score=157.25 Aligned_cols=176 Identities=17% Similarity=0.165 Sum_probs=129.2
Q ss_pred cCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCC--ccC-CCeEeeeEEEc-CCCceEEE
Q 010428 59 NDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQ--SDI-NGCWSGSATIL-PGEKPAIF 134 (511)
Q Consensus 59 NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~--~D~-~g~~SGsav~~-~dg~~~l~ 134 (511)
-|| ++++++|+||||.++.+.... ....|.+++|+||+||+.++.+|.+... +.. .++|.++++.. .+|++||+
T Consensus 25 HDP-sIi~~~g~YYly~T~~~~~~~-~~~gi~v~sS~DLvnW~~~G~aL~~~~~~~~~~~~~~WAP~V~y~~~dGkYYLy 102 (441)
T 3nqh_A 25 HGA-CIVEENGRYYLFGEYKSDKSN-AFPGFSCYSSDDLVNWKFERVVLPMQSSGILGPDRVGERVKVMKCPSTGEYVMY 102 (441)
T ss_dssp EEE-EEEEETTEEEEEEECCCSSCS-SCCCEEEEEESSSSSCEEEEEEECCCSSSTTSTTEEEEEEEEEECTTTCCEEEE
T ss_pred cCC-EEEEECCEEEEEEEcCCccCC-CCCCeeEEECCCCCCcEECceeeccCCccccCCCCccCCceeEEEccCCEEEEE
Confidence 488 789999999999998765432 3468999999999999999998877543 322 35799998763 59999999
Q ss_pred EeccCCC-CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCccEEE
Q 010428 135 YTGIDPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAI 213 (511)
Q Consensus 135 YTg~~~~-~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~ 213 (511)
||+.... +.+.+++|+|++..+ .|+.. .||+... . ....+||.+ |.++||++||++|+ +.
T Consensus 103 yt~~~~~~~~~~igVAtSdsP~G----Pwt~~--gpl~~~g--~---~~~~IDPsv-F~DdDGk~YL~~g~-----~~-- 163 (441)
T 3nqh_A 103 MHADDMNYKDPHIGYATCSTIAG----EYKLH--GPLLYEG--K---PIRRWDMGT-YQDTDGTGYLLLHG-----GI-- 163 (441)
T ss_dssp EEEEETTSCSCEEEEEEESSTTS----CCEEE--EECEETT--E---ECCCCSEEE-EECTTSCEEEEEGG-----GE--
T ss_pred EEeCCCCCCcceEEEEEeCCCCC----CceEc--ceeecCC--C---cccccCceE-EEeCCCCEEEEeCC-----Cc--
Confidence 9987542 457899999988654 47653 5777432 1 124689995 55579999999985 23
Q ss_pred EEE-cCCCCCcEEcccccccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 010428 214 LYR-SKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (511)
Q Consensus 214 ly~-S~Dl~~W~~~~~~l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~ 273 (511)
+++ ++|+.++.-....+. .+...|||.+|+.+ | +++|++|..
T Consensus 164 I~eLs~D~~~~~g~~~~i~---~g~~~EgP~i~K~~--G-------------~YYL~~S~~ 206 (441)
T 3nqh_A 164 VYRLSKDYRTAEEKVVSGV---GGSHGESPAMFKKD--G-------------TYFFLFSNL 206 (441)
T ss_dssp EEEECTTSSSEEEEEESCS---TTCCCEEEEEEEET--T-------------EEEEEEECS
T ss_pred EEEeCCccccccCceEEeC---CCCceECcEEEEEC--C-------------EEEEEEeCC
Confidence 345 889988864221121 23478999999997 6 899998863
|
| >1yif_A Beta-1,4-xylosidase; glycosidase, xylan, structural genomics, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.29.1.23 b.67.2.1 | Back alignment and structure |
|---|
Probab=99.62 E-value=1.1e-14 Score=158.12 Aligned_cols=179 Identities=15% Similarity=0.132 Sum_probs=126.8
Q ss_pred CCCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCc------cCCCeEeeeEEEcCC
Q 010428 55 KNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQS------DINGCWSGSATILPG 128 (511)
Q Consensus 55 ~gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~------D~~g~~SGsav~~~d 128 (511)
.|++.||+ +++++|+||||++..+.. ..|.+++|+||+||+..+.+|.+...+ +..++|+++++. .+
T Consensus 9 ~g~~~DP~-ii~~~~~yY~~~s~~~~~-----~gi~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~WAP~i~~-~~ 81 (533)
T 1yif_A 9 KGFNPDPS-ICRAGEDYYIAVSTFEWF-----PGVQIHHSKDLVNWHLVAHPLQRVSQLDMKGNPNSGGVWAPCLSY-SD 81 (533)
T ss_dssp CSSCCSCE-EEEETTEEEEEECCBTEE-----SBCEEEEESSSSSEEEEECSBCSTTTCCCTTCCTTCBBCSCEEEE-ET
T ss_pred CCCCCCCe-EEEECCEEEEEEecCCCC-----CCeEEEEeCCCCCCeECCccccCcccccccCCCCCCCEECceEEE-EC
Confidence 36889996 678899999998865421 258999999999999999888765322 247899999987 59
Q ss_pred CceEEEEeccCC-C---CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEee
Q 010428 129 EKPAIFYTGIDP-H---NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGS 204 (511)
Q Consensus 129 g~~~l~YTg~~~-~---~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga 204 (511)
|++||+||+... . ..+.+++|+|+|..+ .|++ |+.-.. ..+||.+++ +++|++||+.+.
T Consensus 82 g~~yl~yt~~~~~~g~~~~~~~~va~s~~p~G----pw~~----p~~~~~--------~~iDp~~f~-D~dG~~Yl~~~~ 144 (533)
T 1yif_A 82 GKFWLIYTDVKVVDGAWKDCHNYLVTCETING----DWSE----PIKLNS--------SGFDASLFH-DTDGKKYLLNML 144 (533)
T ss_dssp TEEEEEEEEECCCSSSCCCEEEEEEEESSTTS----CCCC----CEECCC--------SCSCCEEEE-CTTSCEEEEEEE
T ss_pred CEEEEEEEeccCCCCCcccccEEEEEeCCCCC----Cccc----cEEcCC--------CcCCCceEE-CCCCCEEEEEEe
Confidence 999999997643 1 246788999987532 4764 443221 368999654 478999999885
Q ss_pred ecC-----CccEEEEEE-cCCCCCcEEccc--ccccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCC
Q 010428 205 KIN-----RKGLAILYR-SKDFVHWIKAKH--PLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD 274 (511)
Q Consensus 205 ~~~-----~~G~i~ly~-S~Dl~~W~~~~~--~l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~ 274 (511)
... ..+.|.+++ +.|+. +..++ .+.......++|||.+|+.+ | +|+|++|...
T Consensus 145 ~~~~~g~~~~~~i~~~~l~~d~~--~~~g~~~~i~~~~~~~~~EgP~i~k~~--G-------------~YYL~~s~gg 205 (533)
T 1yif_A 145 WDHRIDRHSFGGIVIQEYSDKEQ--KLIGKPKVIFEGTDRKLTEAPHLYHIG--N-------------YYYLLTAEGG 205 (533)
T ss_dssp ECCCTTSCSEEEEEEEEEETTTT--EECSCCEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEESC
T ss_pred cccccCCCCCCCEEEEEECCccC--CCCCCcEEEEcCCCCCccccceEEEEC--C-------------EEEEEEeCCC
Confidence 321 124567776 66653 33332 23333334589999999997 6 8888888654
|
| >2exh_A Beta-D-xylosidase; glykosidase, hydrolsase, family43, hydrolase; HET: MES; 1.88A {Geobacillus stearothermophilus} SCOP: b.29.1.23 b.67.2.1 PDB: 2exi_A* 2exj_A* 2exk_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=1.9e-14 Score=156.43 Aligned_cols=178 Identities=17% Similarity=0.123 Sum_probs=127.7
Q ss_pred CCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCc------cCCCeEeeeEEEcCCC
Q 010428 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQS------DINGCWSGSATILPGE 129 (511)
Q Consensus 56 gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~------D~~g~~SGsav~~~dg 129 (511)
|+..||+ +++++|+||||++.... ...|.+++|+||+||+..+.+|.+...+ +..++|+++++. .+|
T Consensus 11 g~~~DP~-i~~~~~~yY~~~s~~~~-----~~gi~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~WAP~i~~-~~g 83 (535)
T 2exh_A 11 GFHPDPS-ICRVGDDYYIAVSTFEW-----FPGVRIYHSKDLKNWRLVARPLNRLSQLNMIGNPDSGGVWAPHLSY-SDG 83 (535)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBTE-----ESBCEEEEESSSSSCEEEECCBCSTTTCCCTTCCTTCBBCSCEEEE-ETT
T ss_pred CCCCCCE-EEEECCEEEEEECCCCC-----CCCeEEEECCCCCCcEECccccCCcccccccCCCCCCCEECCeEEE-ECC
Confidence 7899996 67899999999886432 2358899999999999999888765322 347899999986 599
Q ss_pred ceEEEEeccCCC----CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeee
Q 010428 130 KPAIFYTGIDPH----NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSK 205 (511)
Q Consensus 130 ~~~l~YTg~~~~----~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~ 205 (511)
++||+||+.... ..+.+++|+++|..+ .|++ |+.-. ...+||.+++ +++|++||+.+..
T Consensus 84 ~~ylyyt~~~~~~g~~~~~~~~va~s~~~~G----pw~~----p~~~~--------~~~iDp~vf~-DddG~~Yl~~~~~ 146 (535)
T 2exh_A 84 KFWLIYTDVKVVEGQWKDGHNYLVTCDTIDG----AWSD----PIYLN--------SSGFDPSLFH-DEDGRKYLVNMYW 146 (535)
T ss_dssp EEEEEEEEECCCSSSCCCEEEEEEEESSTTS----CCCC----CEECC--------CSCSCCEEEE-CTTSCEEEEEEEE
T ss_pred EEEEEEEeccCCCCCccccceEEEEeCCCCC----Cccc----cEecC--------CCcCCCceEE-CCCCCEEEEEEec
Confidence 999999986431 246788999987532 4764 44321 1368999654 4789999998854
Q ss_pred cC-----CccEEEEEE-cCCCCCcEEccc--ccccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCC
Q 010428 206 IN-----RKGLAILYR-SKDFVHWIKAKH--PLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD 274 (511)
Q Consensus 206 ~~-----~~G~i~ly~-S~Dl~~W~~~~~--~l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~ 274 (511)
.. ..+.|.+++ +.|+ |+..++ .+.......++|||.+|+.+ | +|+|++|...
T Consensus 147 ~~~~~~~~~~~i~~~~l~~d~--~~~~g~~~~i~~~~~~~~~EgP~i~k~~--G-------------~YYL~~s~gg 206 (535)
T 2exh_A 147 DHRVDHHPFYGIVLQEYSVEQ--KKLVGEPKIIFKGTDLRITEGPHLYKIN--G-------------YYYLLTAEGG 206 (535)
T ss_dssp CCCTTSCSEEEEEEEEEETTT--TEEEEEEEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEESC
T ss_pred CCccCCCCCCcEEEEEECCcc--CCCCCCcEEEEcCCCCCccccceEEEEC--C-------------EEEEEEeCCC
Confidence 21 124577777 5665 555443 23333334589999999997 6 8888888654
|
| >3qc2_A Glycosyl hydrolase; 5-bladed beta propeller fold, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: PGE; 2.30A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.2e-14 Score=150.65 Aligned_cols=123 Identities=16% Similarity=0.233 Sum_probs=97.2
Q ss_pred CcceecCCCCCCCC-------------CccCCCeEeeeEEEcCCCceEEEEeccCCC------CcceEEEEEecCCCCcc
Q 010428 98 INWIPHDPAIYPSQ-------------QSDINGCWSGSATILPGEKPAIFYTGIDPH------NRQVQNLAVPKNLSDPY 158 (511)
Q Consensus 98 vhW~~~~~aL~P~~-------------~~D~~g~~SGsav~~~dg~~~l~YTg~~~~------~~q~q~lA~s~d~~d~~ 158 (511)
++|+...++|.|+. .||+.+||+|+|+. .+|+++||||++... +.+.+++|+|+|+
T Consensus 20 ~r~~~~~Pil~p~~~~~~~~~~~~~~~~wD~~gvfnp~ai~-~dGky~LfY~~~~~~~~~~~~~~~~ig~A~S~DG---- 94 (364)
T 3qc2_A 20 ERPKNVNPVISPIENTKFYCPLTKDSIAWESNDTFNPAATL-YNGEIVVLYRAEDKSGVGIGHRTSRLGYATSTDG---- 94 (364)
T ss_dssp BCCTTTCCSBCCCSSCCEEETTTTEEECTTSSEEEEEEEEE-ETTEEEEEEEEECSSSSSTTCSCEEEEEEEESSS----
T ss_pred eeCCCCCCeEecCCcccccccccccccccccCceECceEEE-ECCEEEEEEEEECCCCcccCCCceEEEEEEeCCC----
Confidence 34444356899986 78999999999987 599999999997653 4688999999985
Q ss_pred cceeeecCCCceecCCCCCcCCC-----CCCCCCEEEEeCCCCeEEEEEeeecCCccEEEEEEcCCCCCcEEccccc
Q 010428 159 LREWVKSPKNPLMAPDAMNQINT-----SSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPL 230 (511)
Q Consensus 159 l~~w~K~~~nPVi~~p~~~~~~~-----~~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l 230 (511)
++|++. .+|||.+. ...+. ..+|||+| ++.++|+|||++++.....+++.+++|+|+++|++.+.++
T Consensus 95 -i~w~~~-~~Pvl~P~--~~~~~~~e~~~gv~DP~v-~~~edG~yym~Yta~~~~~~~i~lA~S~Dl~~W~k~g~i~ 166 (364)
T 3qc2_A 95 -THFQRE-KTPVFYPD--NDSQKELEWPGGCEDPRI-AVTDDGLYVMMYTQWNRHVPRLAVATSRNLKDWTKHGPAF 166 (364)
T ss_dssp -SSCEEC-SSCSBCCC--SSTTHHHHTTTEEEEEEE-EECTTSCEEEEEEEECSSCEEEEEEEESSSSSCEEEEETT
T ss_pred -ceeeEc-CcCeEcCC--CccccccccCCcEECCEE-EEeCCCEEEEEEEecCCCCeEEEEEEECCCCEEEEeeecc
Confidence 799996 47998654 33322 57899996 4536899999999876556789999999999999987543
|
| >1vkd_A Conserved hypothetical protein TM1225; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.10A {Thermotoga maritima} SCOP: b.67.2.4 | Back alignment and structure |
|---|
Probab=99.56 E-value=1.4e-14 Score=148.96 Aligned_cols=122 Identities=10% Similarity=0.104 Sum_probs=97.9
Q ss_pred CCCcceecCCCCCCCC-CccCCCeEeeeEEEcCCCceEEEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCC
Q 010428 96 DLINWIPHDPAIYPSQ-QSDINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPD 174 (511)
Q Consensus 96 DLvhW~~~~~aL~P~~-~~D~~g~~SGsav~~~dg~~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p 174 (511)
.+++|+..| +|.|+. +| +.|||+++|+.. +|+++|||++....+.+.|++|+|+|+ ++|++.+ +|||.+.
T Consensus 35 ~~~r~~~~P-iL~p~~~~~-~~gv~n~~~i~~-~g~~~lfY~~~~~~~~~~~~~A~S~Dg-----i~w~~~~-~pvl~p~ 105 (338)
T 1vkd_A 35 PVWRYSKNP-IIGRNPVPK-GARVFNSAVVPY-NGEFVGVFRIDHKNTRPFLHFGRSKDG-----INWEIEP-EEIQWVD 105 (338)
T ss_dssp SEEECTTCC-SBCBSCSTT-EEEEEEEEEEEE-TTEEEEEEEEEETTSCEEEEEEEESSS-----SSCEECS-SCCCEEC
T ss_pred ceEECCCCc-eECCCCCcc-cCeEEccEEEEE-CCEEEEEEEEECCCCcEEEEEEEeCCC-----CccEECC-CCEEeCC
Confidence 577888766 899985 77 799999999875 999999999987667789999999985 6999974 7888533
Q ss_pred CCCcCCCCCCC-CCEEEEeCCCCeEEEEEeeecCCccEEEEEEcCCCCCcEEcccc
Q 010428 175 AMNQINTSSFR-DPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHP 229 (511)
Q Consensus 175 ~~~~~~~~~fR-DP~vvw~~~~g~w~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~ 229 (511)
....++..++| ||+| ++ .+|+|||++++ ....+.+.+|+|+|+.+|++.+.+
T Consensus 106 ~~~~~~~~g~~yDP~v-~~-~~d~yym~yt~-~~~~~~i~la~S~Dl~~W~~~~~i 158 (338)
T 1vkd_A 106 VNGEPFQPSYAYDPRV-VK-IEDTYYITFCT-DDHGPTIGVGMTKDFKTFVRLPNA 158 (338)
T ss_dssp TTSCBCCCSSEEEEEE-EE-ETTEEEEEEEE-ESSSEEEEEEEESSSSSEEEECCS
T ss_pred CCCccccCCEEeCcEE-EE-ECCEEEEEEEE-cCCcceEEEEEECCCCeEEECCcc
Confidence 11224567899 9996 45 46899999998 656678999999999999987643
|
| >3r4z_A Glycosyl hydrolase family 32, N terminal; AGAR metabolism, neoagarobiose, 3,6-anhydro-L-galactose, ALP galactopyranose, bioenergy; HET: GLA; 1.55A {Saccharophagus degradans} PDB: 3r4y_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=2.7e-13 Score=141.15 Aligned_cols=156 Identities=16% Similarity=0.176 Sum_probs=109.9
Q ss_pred ccCCcceEEECCEEEEEeeeCCCCC-CCCCcEEEEEEeCCC-CcceecC-CCCCCC------------------CCccCC
Q 010428 58 INDPNGVMIYKGIYHLFYQYNPKGA-VWGNIVWAHSTSKDL-INWIPHD-PAIYPS------------------QQSDIN 116 (511)
Q Consensus 58 ~NDPnG~~~~~G~YHLFYQ~~P~~~-~~g~~~WgHa~S~DL-vhW~~~~-~aL~P~------------------~~~D~~ 116 (511)
+-.|. +++++|+|+|||..+.... ......+++|+|+|+ .+|++.+ ++|.|. ..||..
T Consensus 125 vwaPs-vi~~dGkyyL~Yt~~~~~~~~~~~~~igvA~Sdd~~Gpw~~~~~Pvi~~~~~~~w~~ddd~~~~~~~~~~~d~~ 203 (374)
T 3r4z_A 125 VFTPE-VLRHNGTYYLVYQTVKAPYLNRSLEHIAIAYSDSPFGPWTKSDAPILSPENDGVWDTDEDNRFLVKEKGSFDSH 203 (374)
T ss_dssp EEEEE-EEEETTEEEEEEEEECSSCCTTCCBEEEEEEESSTTCCCEECSSCSBCCCCCSEECSSSSCTTCEEECCSTTSS
T ss_pred EECCE-EEEECCEEEEEEEeccCCCCCCCcceEEEEEECCCCCCeEECCCCEeCCCcCCceeecCCceEEEecCCccccC
Confidence 34563 6778999999999875432 123578999999997 6899874 445443 124556
Q ss_pred CeEeeeEEEcCCCceEEEEeccCCC-------CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEE
Q 010428 117 GCWSGSATILPGEKPAIFYTGIDPH-------NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTT 189 (511)
Q Consensus 117 g~~SGsav~~~dg~~~l~YTg~~~~-------~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~v 189 (511)
+++.++++. .+|+++|+|++.... +.+.+++|+|++.. -.|+|.+.|||+... +||+
T Consensus 204 ~~~~P~v~~-~~g~yyl~Y~~~~~~~~~~~~~~~~~igvA~sds~~----Gpw~~~~~~Pi~~~~----------~dp~- 267 (374)
T 3r4z_A 204 KVHDPCLMF-FNNRFYLYYKGETMGESMNMGGREIKHGVAIADSPL----GPYTKSEYNPITNSG----------HEVA- 267 (374)
T ss_dssp EEEEEEEEE-ETTEEEEEEEEECTTCCEETTEECEEEEEEEESSTT----CCCEECTTCCCCSSC----------SSCC-
T ss_pred ccccceEEE-ECCEEEEEEEecCCCCccccCCCcceEEEEEECCCC----CCCEECCCCCEeCCC----------CCCc-
Confidence 688888775 699999999997532 14689999998753 359998889998522 4998
Q ss_pred EEeCCCCeEEEEEeeecCCccEEEEEEcCCCCCcEEcccccccC
Q 010428 190 AWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSV 233 (511)
Q Consensus 190 vw~~~~g~w~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~ 233 (511)
||+. ++.|+++++....+.+ .++.|+|+++|++.+.+...+
T Consensus 268 V~~~-~~g~~~mv~~~g~~~~--~l~~S~Dg~~W~~~~~i~~~p 308 (374)
T 3r4z_A 268 VWPY-KGGMATMLTTDGPEKN--TCQWAEDGINFDIMSHIKGAP 308 (374)
T ss_dssp EEEE-TTEEEEEECSSSTTCS--EEEEETTSSSCEEEEECSCCC
T ss_pred eEEe-CCEEEEEEEecCCCce--EEEECCCcCCeEEcceeccCC
Confidence 5774 4556545553333344 567799999999988655443
|
| >3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=5.5e-13 Score=144.73 Aligned_cols=201 Identities=14% Similarity=0.098 Sum_probs=133.2
Q ss_pred CCCccccccCCCC---CccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCC--CccCCCe
Q 010428 44 PYRTGYHFQPPKN---WINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQ--QSDINGC 118 (511)
Q Consensus 44 ~~Rp~yHf~p~~g---w~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~--~~D~~g~ 118 (511)
..+|..++..+.| ..-|| .+++++|+||||....... .+...+..++|+||+||+..+.+|.+.. .++..++
T Consensus 41 ~~~~g~~w~d~~g~~i~a~DP-~Ii~~~g~YY~~~T~~~~~--~~~~gi~v~~S~DLv~W~~~g~~l~~~~~~~~~~~~~ 117 (526)
T 3vsf_A 41 VIVNGTQFKDTSGNVIHAHGG-GMLKHGDYYYWYGEYRDDS--NLFLGVSCYRSKDLVNWEYRGEVLSRNSAPELNHCNI 117 (526)
T ss_dssp EEESSBCCBCTTSCBCCCEEE-EEEEETTEEEEEEEEECTT--SSEEEEEEEEESSSSSCEEEEEEEETTSSGGGSSCEE
T ss_pred eEeCCCccCCCCCCEEeccCC-eEEEECCEEEEEEecCCCC--CCcCcEEEEECCCCCCcCCCCccCCCCCCcCcccCce
Confidence 3455544444433 34699 6888999999999976322 2336789999999999999998886653 4555679
Q ss_pred EeeeEEEc-CCCceEEEEeccCC--CCcceEEEEEecCCCCcccceeeecC-CCceecCC-CCCcCCCCCCCCCEEEEeC
Q 010428 119 WSGSATIL-PGEKPAIFYTGIDP--HNRQVQNLAVPKNLSDPYLREWVKSP-KNPLMAPD-AMNQINTSSFRDPTTAWLG 193 (511)
Q Consensus 119 ~SGsav~~-~dg~~~l~YTg~~~--~~~q~q~lA~s~d~~d~~l~~w~K~~-~nPVi~~p-~~~~~~~~~fRDP~vvw~~ 193 (511)
|.++++.. .+|++||||+.... ...+.+++|+|++..+ .|+... ..|+.... ...+......+||.+ |.+
T Consensus 118 WAP~v~~~~~~Gkyymy~~~~~~~~~~~~~igvats~~p~G----pw~~~g~~~p~~~~g~~~~~~~~~~~iDp~v-f~D 192 (526)
T 3vsf_A 118 ERPKVMYNASTGEFVMWMHWENGINYGQARAAVAYSKTPDG----KFTYIRSFRPMQDTGVMDHGLPGYMSRDCNV-FVD 192 (526)
T ss_dssp EEEEEEECTTTCCEEEEEEEECSSCSCCCEEEEEEESSSSS----CCEEEEEECSSCTTCCEETTEESCCCCSEEE-EEC
T ss_pred ECCEEEEECCCCEEEEEEEeeCCCCCCcceEEEEEcCCCCC----CCEeccccccccccccccCCCCCcccccccE-EEC
Confidence 99999864 38999999996521 2357899999988644 365421 12433110 001111245699995 555
Q ss_pred CCCeEEEEEeeecCCccEEEEEE-cCCCCCcEEcccccccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEee
Q 010428 194 PDKRWRVIIGSKINRKGLAILYR-SKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSL 272 (511)
Q Consensus 194 ~~g~w~m~~ga~~~~~G~i~ly~-S~Dl~~W~~~~~~l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~ 272 (511)
++|++||++++.. .+.+.+++ ++|+..+......+. .+...|+|.+|+.+ | +|+|++|.
T Consensus 193 ~dG~~Yl~~~~~~--~~~i~i~~l~~d~~~~~~~~~~~~---~g~~~EgP~i~k~~--G-------------~YYL~~S~ 252 (526)
T 3vsf_A 193 TDGKGYFISAANE--NMDLHLYELTPDYKNIASLKAKLF---VGQQREAPCLIKRN--G-------------YYYLITSG 252 (526)
T ss_dssp TTSCEEEEEEETT--TTEEEEEEECTTSSSEEEEEEEES---TTSCCEEEEEEESS--S-------------CEEEEEEC
T ss_pred CCCCEEEEEEecC--CCceEEEEcCCCcccccCceEEeC---CCCCcCCeEEEEEC--C-------------EEEEEEcC
Confidence 7999999998742 23455665 677776653221121 13468999999987 6 88888884
|
| >4ak5_A Anhydro-alpha-L-galactosidase; hydrolase, marine glycoside hydrolase, marine polysaccharide degradation, marine cazymes, AGAR metabolism; 1.70A {Bacteroides plebeius} PDB: 4ak7_A* 4ak6_A | Back alignment and structure |
|---|
Probab=99.44 E-value=2.5e-12 Score=135.03 Aligned_cols=156 Identities=21% Similarity=0.195 Sum_probs=110.3
Q ss_pred ccCCcceEEECCEEEEEeeeCCCCC-CCCCcEEEEEEeCC-CCcceecC-CCCCCCC------------------CccCC
Q 010428 58 INDPNGVMIYKGIYHLFYQYNPKGA-VWGNIVWAHSTSKD-LINWIPHD-PAIYPSQ------------------QSDIN 116 (511)
Q Consensus 58 ~NDPnG~~~~~G~YHLFYQ~~P~~~-~~g~~~WgHa~S~D-LvhW~~~~-~aL~P~~------------------~~D~~ 116 (511)
+.+| .+++++|+|+|||..+.... ..+...+|.|+|+| .-.|++.+ ++|.|.. .||..
T Consensus 165 v~aP-~Vi~~~Gkyym~Yt~~~~~~~~~~~~~IgvA~Sdsp~Gpwt~~~~Pvl~~~~~~~W~~ddd~~~~~~~~~~wD~~ 243 (404)
T 4ak5_A 165 VFTP-EVMEWKGKYYLCYQAVKSPYTVRVKNTIGMACADSPEGLWTKTDKPVLEPSDTGEWEGDEDNRFKVVSKGDFDSH 243 (404)
T ss_dssp EEEE-EEEEETTEEEEEEEEECSCCCTTCCCEEEEEEESSTTCCCEECSSCSBCCCSCCEECSSSSCTTCEEECCSTTSS
T ss_pred EEee-EEEEECCEEEEEEEeccCCCCCCCcceEEEEEEeCCCCCceECCCceecCCCCcceeeccCceeeeccCCcccCC
Confidence 4567 46789999999999765422 12456899999986 24899975 4555532 35667
Q ss_pred CeEeeeEEEcCCCceEEEEeccCCC-------CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEE
Q 010428 117 GCWSGSATILPGEKPAIFYTGIDPH-------NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTT 189 (511)
Q Consensus 117 g~~SGsav~~~dg~~~l~YTg~~~~-------~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~v 189 (511)
+++.++++. .+|+++|+|+|.... +.+.+++|+|++.. -.|+|.+.|||+... .+++
T Consensus 244 ~~~~P~v~~-~~g~yyl~Ysg~~~~~~~~~~~~~~~igvA~Sdd~~----Gpw~k~~~nPv~~~~----------~e~~- 307 (404)
T 4ak5_A 244 KVHDPCIIP-YNGKFYMYYKGERMGEEITWGGREIKHGVAIAENPM----GPYVKSEYNPISNSG----------HEVC- 307 (404)
T ss_dssp EEEEEEEEE-ETTEEEEEEEEECTTCCEETTEECCEEEEEEESSTT----CCCEECTTCCSCSSC----------SSCC-
T ss_pred cEECCEEEE-ECCEEEEEEECCCCCCccccCCCcceEEEEEECCCC----CCcEECCCCceecCC----------Ccce-
Confidence 889999876 699999999998542 14689999998863 369999889999532 2556
Q ss_pred EEeCCCCeEEEEEeeecCCccEEEEEEcCCCCCcEEcccccccC
Q 010428 190 AWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSV 233 (511)
Q Consensus 190 vw~~~~g~w~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~ 233 (511)
||++.+|.|+|+... ..+.| .++.|+|+++|++.+.+...+
T Consensus 308 Vw~~~dg~~~ll~~~-g~~~g--~l~~S~Dg~~W~~~~~l~~~p 348 (404)
T 4ak5_A 308 VWPYKGGIASLITTD-GPEKN--TLQWSPDGINFEIMSVVKGAP 348 (404)
T ss_dssp EEEETTEEEEEECSS-STTCS--EEEEESSSSCCEEEEECSCCC
T ss_pred EEEeCCcEEEEEEec-CCCce--EEEECCCCCeEEEeeeeccCc
Confidence 688555544665432 23445 567799999999988665443
|
| >3c2u_A Xylosidase/arabinosidase; tetramer, glycoside hydrolase, GH43, alpha-L- arabinofuranosidase; HET: B3P; 1.30A {Selenomonas ruminantium} PDB: 1y7b_A* 1yi7_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=7.4e-12 Score=136.14 Aligned_cols=178 Identities=15% Similarity=0.159 Sum_probs=123.1
Q ss_pred CCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCC------ccCCCeEeeeEEEcCCC
Q 010428 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQ------SDINGCWSGSATILPGE 129 (511)
Q Consensus 56 gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~------~D~~g~~SGsav~~~dg 129 (511)
|+..||. +++++|+|+||..... | ...+..+.|+||+||+..+.+|.+... .+..++|.++++. .+|
T Consensus 10 ~~~~DP~-i~~~~~~yY~~~s~~~----~-~~gi~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~WAP~i~~-~~g 82 (538)
T 3c2u_A 10 GFNPDPS-IVRAGDDYYIATSTFE----W-FPGVQIHHSKDLVHWHLVAHPLSTTEFLDMKGNPDSGGIWAPDLSY-ADG 82 (538)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBT----E-ESBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEECSCEEEE-ETT
T ss_pred CCCCCCE-EEEECCEEEEEEccCC----C-CCCeEEEECCCCCCcEECccccCCcccccccCCCCCCCEECCeEEE-ECC
Confidence 6789994 7889999999876431 1 125788999999999999988865431 1346899999986 599
Q ss_pred ceEEEEeccCC-C---CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeee
Q 010428 130 KPAIFYTGIDP-H---NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSK 205 (511)
Q Consensus 130 ~~~l~YTg~~~-~---~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~ 205 (511)
++||+||.... . ..+.+++|+++|..+ .|++ |+.-.. ..+||.+++ ++||++||+.+..
T Consensus 83 ~~yly~t~~~~~~g~~~~~~~~va~s~~p~G----pw~~----p~~~~~--------~~iDp~~f~-DddG~~Yl~~~~~ 145 (538)
T 3c2u_A 83 KFWLIYTDVKVVDGMWKDCHNYLTTAEDIKG----PWSK----PILLNG--------AGFDASLFH-DPSGKKYLVNMYW 145 (538)
T ss_dssp EEEEEEEEECCCSSSCCCEEEEEEEESSTTC----CCCC----CEEEEC--------SCSCCEEEE-CTTSCEEEEEEEE
T ss_pred EEEEEEEeccCCCCCcccccEEEEEECCCCC----Cccc----cEecCC--------CcCCCeeEE-CCCCCEEEEEEec
Confidence 99999997643 1 245678999987643 3764 443221 257999654 4789999998853
Q ss_pred cC-----CccEEEEEE-cCCCCCcEEcccc--cccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCC
Q 010428 206 IN-----RKGLAILYR-SKDFVHWIKAKHP--LHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD 274 (511)
Q Consensus 206 ~~-----~~G~i~ly~-S~Dl~~W~~~~~~--l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~ 274 (511)
.. ..+.|.+.+ +.|. |+..+++ +.........|+|.+|+.+ | +|+|++|...
T Consensus 146 ~~~~~~~~~~~i~~~~l~~d~--~~~~g~~~~i~~~~~~~~~EgP~i~k~~--G-------------~YYL~~s~gg 205 (538)
T 3c2u_A 146 DQRVYHHNFYGIALQEYSVAE--EKLIGKPEIIYKGTDIAYTEGPHLYYIN--D-------------MYYLMTAEGG 205 (538)
T ss_dssp CCCTTSCSEEEEEEEEEETTT--TEECSCCEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEESC
T ss_pred CCccCCCCCCCEEEEEECCcc--CCCCCCCEEEecCCCCCccccceEEEEC--C-------------EEEEEEecCC
Confidence 21 124566776 5564 4544432 2222334579999999997 6 8888888654
|
| >2x8s_A Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; 1.50A {Bacillus subtilis} PDB: 2x8f_A 2x8t_A 3lv4_A | Back alignment and structure |
|---|
Probab=99.35 E-value=1.7e-11 Score=131.34 Aligned_cols=182 Identities=16% Similarity=0.203 Sum_probs=114.6
Q ss_pred ccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCC--------------c-cCCCeEeee
Q 010428 58 INDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQ--------------S-DINGCWSGS 122 (511)
Q Consensus 58 ~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~--------------~-D~~g~~SGs 122 (511)
.-|| .+++++|+|+||..+. ..++|+||+||+..+.+|.+... | ...++|.++
T Consensus 36 ~~DP-sii~~~g~YYl~~T~~-----------~i~~S~DLvnW~~~g~~l~~~~~~~~~~~~~l~~~~~w~~~~~~WAP~ 103 (470)
T 2x8s_A 36 VHDP-SIIETNGTFYVFGSHL-----------ASAKSNDLMQWQQLTTSVSNDNPLIPNVYEELKETFEWAQSDTLWAAD 103 (470)
T ss_dssp CSSC-EEEEETTEEEEECSTT-----------CEEEESSSSBCEEEECSCSTTCTTSTTHHHHTHHHHHHHTCSSCCCCE
T ss_pred CCCC-EEEEECCEEEEEECcC-----------ceEECCCcccceeccccccccccccccccccccccccccCCCceECCe
Confidence 5699 5778899999985421 35799999999999877654311 2 236899999
Q ss_pred EEEcCCCceEEEEeccCC-CCcceEEEEEecCCCCcccceeeecCCCceecCC-----CCCcC---CCCCCCCCEEEEeC
Q 010428 123 ATILPGEKPAIFYTGIDP-HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPD-----AMNQI---NTSSFRDPTTAWLG 193 (511)
Q Consensus 123 av~~~dg~~~l~YTg~~~-~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p-----~~~~~---~~~~fRDP~vvw~~ 193 (511)
++..++|++||+|+.... ...+.+++|+|+|..+ .|+.. +.++.... +...+ .....+||.+++ +
T Consensus 104 vi~~~dGkyylyys~~~~~~~~~~IgvatSddp~G----Pw~~~-g~~l~~~~~~~~~dg~~~~~~~~~~~IDp~vf~-D 177 (470)
T 2x8s_A 104 VTQLADGKYYMYYNACRGDSPRSAMGVAVADNIEG----PYKNK-GIFLKSGMEGTSSDGTPYDATKHPNVVAPHTFF-D 177 (470)
T ss_dssp EEECTTSCEEEEEEEECSSSCCEEEEEEEESSTTC----CCEEE-EEEEEECCSSBCTTSSBCCTTTSCCSCCCEEEE-C
T ss_pred EEEecCCEEEEEEEeccCCCCccEEEEEEeCCCCC----CceeC-CeeeccCcccccccccccccccCCCCCCCCEEE-c
Confidence 876568999999998643 2456788999988643 48764 23443311 00001 123568999654 4
Q ss_pred CCCeEEEEEeeecCCccEEEEEEc-CCC---CCcEEcccccccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEE
Q 010428 194 PDKRWRVIIGSKINRKGLAILYRS-KDF---VHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLK 269 (511)
Q Consensus 194 ~~g~w~m~~ga~~~~~G~i~ly~S-~Dl---~~W~~~~~~l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~ 269 (511)
++|++||++|+.. |.|.+.+- .|. ..++..+..+.. ......|.|.+|.....| +|+|+
T Consensus 178 dDG~~Yl~~g~~~---~gI~~~eL~~d~~~~~~~~~~~~~i~~-g~~~~~EGP~i~~~K~~G-------------~YYL~ 240 (470)
T 2x8s_A 178 KDGKLWMVYGSYS---GGIFILEMNPKTGFPLPGQGYGKKLLG-GNHSRIEGPYVLYNPDTQ-------------YYYLY 240 (470)
T ss_dssp TTSCEEEEECBST---TCEEEEEBCTTTSSBCTTCTTCEEEEC-CSSCSEEEEEEEEETTTT-------------EEEEE
T ss_pred CCCCEEEEeeecC---CcEEEEEECCccCcCcCCcccceEecC-CCCCceeccEEEEEccCC-------------EEEEE
Confidence 7899999998642 33556653 332 112100111111 122468999999542225 89999
Q ss_pred EeeCC
Q 010428 270 VSLDD 274 (511)
Q Consensus 270 ~S~~~ 274 (511)
+|...
T Consensus 241 ~S~g~ 245 (470)
T 2x8s_A 241 LSYGG 245 (470)
T ss_dssp EEESB
T ss_pred EEeCC
Confidence 88753
|
| >3zxk_A Hiaxhd3; hydrolase, sugar binding protein; HET: XYP EPE; 1.44A {Humicola insolens} PDB: 3zxj_A* 3zxl_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=3.1e-09 Score=115.64 Aligned_cols=181 Identities=9% Similarity=0.029 Sum_probs=113.2
Q ss_pred CCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCC---C---------ccCCCeEeeeE
Q 010428 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQ---Q---------SDINGCWSGSA 123 (511)
Q Consensus 56 gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~---~---------~D~~g~~SGsa 123 (511)
|+.-|| -+++.+|+|+||-..... ...+--..|+||+||+..+.+|.... . ....|+|.+++
T Consensus 15 g~~~DP-~iir~~~~YY~~~st~~~-----~pg~~i~~S~DLvnW~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~WAP~i 88 (542)
T 3zxk_A 15 EDHPAL-EVFRVGSVFYYSSSTFAY-----SPGAPVLKSYDLVHWTPVTHSVPRLNFGSNYDLPSGTPGAYVKGIWASTL 88 (542)
T ss_dssp SCCCSC-EEEEETTEEEEECCCBTE-----ESEEEEEEESSSSSCEEEEEEESSCCSCGGGGCCSSTTTTTTCSBCSCEE
T ss_pred CCCCCC-eEEEECCEEEEEEecCcc-----CCCeEEEEcCCCCCccccccccccCCccccccccCCcccccCCceECCcE
Confidence 567899 578899999998543211 12467788999999999987764321 0 11368999998
Q ss_pred EEcC-CCceEEEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCC--CCcCCCCCCCCCEEEEeCCCCeEEE
Q 010428 124 TILP-GEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDA--MNQINTSSFRDPTTAWLGPDKRWRV 200 (511)
Q Consensus 124 v~~~-dg~~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~--~~~~~~~~fRDP~vvw~~~~g~w~m 200 (511)
.... +|++||+|+.. ..+++|++++..+|+ +. +.|++.+.. .+..-.....||.+++ ++||+.||
T Consensus 89 ~~~~~~G~fYly~~~~-----~~~~v~~a~~p~GPf-----~~-g~~l~~~~~ws~~~~~~~~~iDp~~f~-DdDG~~Yl 156 (542)
T 3zxk_A 89 RYRRSNDRFYWYGCVE-----GRTYLWTSPGGNALA-----NN-GEVPPSAWNWQHTATIDNCYYDAGLLI-DDDDTMYI 156 (542)
T ss_dssp EEETTTTEEEEEEEET-----TEEEEEEEECTTGGG-----TT-TCCCGGGCCCEEEEEESSCCTTCEEEE-CTTSCEEE
T ss_pred EEECCCCEEEEEEECC-----CcEEEEEECCCCCCc-----cc-cccccccCccccccccCCCCCCCcEEE-cCCCCEEE
Confidence 7642 49999999864 467899998876553 11 223322100 0000012357999655 47999999
Q ss_pred EEeeecCCccEEEEEE-cCCCCCcEEcccccccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCC
Q 010428 201 IIGSKINRKGLAILYR-SKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD 274 (511)
Q Consensus 201 ~~ga~~~~~G~i~ly~-S~Dl~~W~~~~~~l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~ 274 (511)
+.|. +.|.+.+ +.|+..=.-....+.....+...|-|-+++.+ | +++|++|...
T Consensus 157 ~~g~-----~~i~~~eL~~d~~~~~~~~~~i~~~~~g~~~EgP~i~k~~--G-------------~YYL~~s~~~ 211 (542)
T 3zxk_A 157 AYGN-----PTINVAQLSPDGTRQVRVQQRVYAHPQGQTVEGARMYKIR--G-------------NYYILVTRPA 211 (542)
T ss_dssp EECS-----SSEEEEEECTTSSSEEEEEEEEECCTTCCCCEEEEEEEET--T-------------EEEEEEEETT
T ss_pred EEcC-----CCEEEEEeCCccCcccCCcEEEEeCCCCccccccEEEEEC--C-------------EEEEEEEeCC
Confidence 9974 2355555 56654322111112222223378999999997 6 7888877643
|
| >3k1u_A Beta-xylosidase, family 43 glycosyl hydrolase; structural genomics, APC20493, family 43 GL hydrolase, PSI-2; HET: MSE; 1.55A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=98.99 E-value=2.8e-08 Score=100.90 Aligned_cols=183 Identities=16% Similarity=0.172 Sum_probs=111.1
Q ss_pred cCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCC---CCCCCccCCCeEeeeEEEcCCCceEEEE
Q 010428 59 NDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAI---YPSQQSDINGCWSGSATILPGEKPAIFY 135 (511)
Q Consensus 59 NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL---~P~~~~D~~g~~SGsav~~~dg~~~l~Y 135 (511)
.|| .++++++.|+||+...+..+ .+--..|+||++|+..+... .+.......++|.++++. .+|++||+|
T Consensus 18 aDP-~ii~~~d~yY~~~st~~~~~-----g~~i~~S~DL~~w~~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~G~yylyy 90 (330)
T 3k1u_A 18 ADP-MIYKHNDGYYYFTASVPEYD-----RIEVRKAKTIEGLRNAEPVDVWRRHESGEMSNLIWAPEIHF-INGAWYIYF 90 (330)
T ss_dssp EEE-EEEECTTSCEEEEEECTTCC-----EEEEEEESSTGGGTTSCCEEEEECCSSSTTSEEEEEEEEEE-ETTEEEEEE
T ss_pred CCC-EEEEECCEEEEEEeccCCCC-----CEEEEEcCCcCCccCCcceeecccCCCCccCCCeECCEEEE-ECCeEEEEE
Confidence 699 57889999999998765432 56778899999999765321 222333456799999876 599999999
Q ss_pred eccCCC-----CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeec--CC
Q 010428 136 TGIDPH-----NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI--NR 208 (511)
Q Consensus 136 Tg~~~~-----~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~--~~ 208 (511)
+..... .......+++.+..+|.-..|+.. ..+... .+ ..-.||.++ .+++++|+|+.+... ..
T Consensus 91 s~~~~~~~~~~~~~~~~~~~~~~~~gP~~~~~~~~---~~~~~~--~~---~~~IDp~vf-~Ddd~~~~~~~~~~~~~~~ 161 (330)
T 3k1u_A 91 AAAPDKNIEDDTFNHRMFVIQNENENPFTGNWVEK---GRIKTA--WE---SFSLDATIF-EHNEKLYYVWAQQDINIKG 161 (330)
T ss_dssp EEESSSCCBTTBCCCEEEEEEECSSSTTSSCCEEE---EECCCS--SC---SCEEEEEEE-EETTEEEEEEEECCTTSSS
T ss_pred EeccCCCCCCcccceeeeEEEeCCCCCcccccccc---ccccCC--CC---CCccCceEE-EECCccEEEEeecCCCcCC
Confidence 975431 112234455555545543456542 112111 11 123699965 446777776665433 23
Q ss_pred ccEEEEEEcCCCCCcEEcccc--cccC------CCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCC
Q 010428 209 KGLAILYRSKDFVHWIKAKHP--LHSV------KGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD 274 (511)
Q Consensus 209 ~G~i~ly~S~Dl~~W~~~~~~--l~~~------~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~ 274 (511)
.+.|.+.+-++- ++..+++ +... ......|-|-+++.+ | +++|++|...
T Consensus 162 ~~~i~i~~l~~~--~~~~g~~~~i~~~~~~~e~~~~~~~EGp~i~k~~--G-------------~YYL~ys~~~ 218 (330)
T 3k1u_A 162 HSNIYIAEMENP--WTLKTKPVMLTKPELEWEIKGFWVNEGPAVLKKN--G-------------KIFITYSASA 218 (330)
T ss_dssp SBEEEEEEEEET--TEECSCCEEEECSCSGGGCSSSCBEEEEEEEEET--T-------------EEEEEEEESC
T ss_pred CceEEEEECCCC--ccccCCcEEecCCCccccccCCceeeCCEEEEEC--C-------------EEEEEEEeCC
Confidence 345666664332 3444432 1111 122356999999987 6 8999988654
|
| >3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=5.1e-09 Score=111.92 Aligned_cols=178 Identities=13% Similarity=0.125 Sum_probs=116.2
Q ss_pred cCCcceEE-ECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCC--CC-CCccCCCeEeeeEEEcCCCceEEE
Q 010428 59 NDPNGVMI-YKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIY--PS-QQSDINGCWSGSATILPGEKPAIF 134 (511)
Q Consensus 59 NDPnG~~~-~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~--P~-~~~D~~g~~SGsav~~~dg~~~l~ 134 (511)
-|| .+++ .+|+|+||+.... ...+..+.|+||+||+..+.++. +. ......++|.+.++. .+|++||+
T Consensus 20 ~DP-~iir~~dg~YY~~~T~~~------~~~i~i~~S~DLv~W~~~~~~~~w~~~~~~~~~~~~WAP~v~~-~~Gkyyly 91 (468)
T 3akh_A 20 ADP-HIFKHTDGYYYFTATVPE------YDRIVLRRATTLQGLATAPETTIWTKHASGVMGAHIWAPEIHF-IDGKWYVY 91 (468)
T ss_dssp EEE-EEEECTTSCEEEEEECTT------CCEEEEEEESSTGGGGGCCCEEEEECCSSSTTCEEEEEEEEEE-ETTEEEEE
T ss_pred CCC-EEEEecCCEEEEEEEeCC------CCCEEEEECCCccccccCCCcceecCCCCCCCCCCEecceEEE-ECCEEEEE
Confidence 899 5677 5999999988631 24688999999999998865332 21 122346799999876 49999999
Q ss_pred EeccCCCC--cceEEEEE--ecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecC---
Q 010428 135 YTGIDPHN--RQVQNLAV--PKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN--- 207 (511)
Q Consensus 135 YTg~~~~~--~q~q~lA~--s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~--- 207 (511)
|+...... ...+++|+ ++|. .--.|+.. ..++.+. + ....||.++ . ++|++||+++....
T Consensus 92 ys~~~~~~~~~~~i~va~~~s~dp---~~Gpw~~~--g~~~~~~---~---~~~IDp~vf-~-ddG~~Yl~~g~~~~~~~ 158 (468)
T 3akh_A 92 FAAGSTSDVWAIRMYVLESGAANP---LTGSWTEK--GQIATPV---S---SFSLDATTF-V-VNGVRHLAWAQRNPAED 158 (468)
T ss_dssp EEEECSSCTTCCEEEEEEECCSCT---TTSCCEEE--EECCCSS---C---SCEEEEEEE-E-ETTEEEEEEEECCTTSS
T ss_pred EEeECCCCCCceeEEEEEccCCCC---CCCCCccc--ceeecCC---C---CCcCcCeEE-E-ECCEEEEEEEccCCCCC
Confidence 99865322 34566766 4443 11358764 2333221 1 235799964 4 68999999986431
Q ss_pred CccEEEEEEcCCCCCcEEcccc--cccCC------CCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCC
Q 010428 208 RKGLAILYRSKDFVHWIKAKHP--LHSVK------GTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD 274 (511)
Q Consensus 208 ~~G~i~ly~S~Dl~~W~~~~~~--l~~~~------~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~ 274 (511)
..+.|.+.+.+|. |+..+++ +..+. .....|-|-+|+.+ | +++|++|...
T Consensus 159 ~~~~i~i~~l~~~--~~~~g~~~~i~~~~~~we~~g~~~~EGP~i~k~~--G-------------~YYL~ys~~g 216 (468)
T 3akh_A 159 NNTSLFIAKMANP--WTISGTPTEISQPTLSWETVGYKVNEGPAVIQHG--G-------------KVFLTYSASA 216 (468)
T ss_dssp SSBEEEEEEEEET--TEEEEEEEEEECCCSGGGCSSSCBEEEEEEEEET--T-------------EEEEEEEESC
T ss_pred CCCcEEEEEeCCC--ceecCccEEecCCCcccccCCCccccCCEEEEEC--C-------------EEEEEEEeCC
Confidence 2345777777663 6654432 21111 12368999999986 6 8888888754
|
| >3qz4_A Endo-1,4-beta-xylanase D; 5-bladed beta-propeller fold, xylan degradation, structural joint center for structural genomics, JCSG; HET: EPE; 1.74A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.55 E-value=1.8e-06 Score=87.08 Aligned_cols=153 Identities=10% Similarity=0.026 Sum_probs=95.8
Q ss_pred ccCCcceEEE----CCEEEEEeeeCCCCCCCCCcEEEEEEeCCCC-cceecCCCCCCCCCccCCCeEeeeEEEcC-CCce
Q 010428 58 INDPNGVMIY----KGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIPHDPAIYPSQQSDINGCWSGSATILP-GEKP 131 (511)
Q Consensus 58 ~NDPnG~~~~----~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLv-hW~~~~~aL~P~~~~D~~g~~SGsav~~~-dg~~ 131 (511)
+..| -++++ +|+|||||..+.... +....+.|+|+|.. .|++++..|..........+..+++++++ ||++
T Consensus 77 ~wAP-~v~~~~~~~~Gkyylyyt~~~~~~--~~~~i~va~s~~p~Gpw~~~~~p~~~~~~~g~~~~iDp~vf~dd~dG~~ 153 (311)
T 3qz4_A 77 AWAP-CIEEKKIDGKYKYFFYYSANPTTN--KGKQIGVAVADSPTGPFTDLGKPIITSSPTGRGQQIDVDVFTDPVSGKS 153 (311)
T ss_dssp EEEE-EEEEEEETTEEEEEEEEEEEETTC--SSCEEEEEEESSTTCCCEECSSCSBCSCTTSSSBSCCCEEEECTTTCCE
T ss_pred cCCC-eeEEeeecCCCEEEEEEEeccCCC--CCeeEEEEEECCCCCCceECCcceEcCCCCCCcccccccEEEECCCCcE
Confidence 3457 47788 999999999875432 24689999999986 89997643333221111345678988876 8999
Q ss_pred EEEEeccCCCCcceEEEEE-ecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCcc
Q 010428 132 AIFYTGIDPHNRQVQNLAV-PKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKG 210 (511)
Q Consensus 132 ~l~YTg~~~~~~q~q~lA~-s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G 210 (511)
||+|.+. .+.+|. +.|. .+|... ...++.+...+........-|++ ++ .+|+|||++++......
T Consensus 154 yl~~g~~------~i~~~~l~~d~-----~~~~~~-~~~i~~~~~~~~~~~~~~EgP~i-~k-~~g~YyL~~s~~~~~~~ 219 (311)
T 3qz4_A 154 YLYWGNG------YMAGAELNDDM-----LSIKEE-TTVVLTPKGGTLQTYAYREAPYV-IY-RKGIYYFFWSVDDTGSP 219 (311)
T ss_dssp EEEECBS------SCEEEEBCTTS-----SSBCGG-GCEECCCCCCCTTTTCCCEEEEE-EE-ETTEEEEEEEESCTTST
T ss_pred EEEEcCC------CEEEEEeCCcc-----cccCCC-ceEEeCCCCCcccccceeeccEE-EE-ECCEEEEEEEcCCCCCC
Confidence 9999751 234443 4442 455542 12333321000001123567884 56 58999999987642211
Q ss_pred --EEEEEEcCCCC-CcEEcc
Q 010428 211 --LAILYRSKDFV-HWIKAK 227 (511)
Q Consensus 211 --~i~ly~S~Dl~-~W~~~~ 227 (511)
++.+++|+++. -|+..+
T Consensus 220 ~y~~~~~~S~~~~GPw~~~~ 239 (311)
T 3qz4_A 220 NYHVVYGTAQSPLGPIEVAK 239 (311)
T ss_dssp TCEEEEEEESSTTCCCEEEE
T ss_pred CceEEEEEcCCCCCCCEeCC
Confidence 67889999987 598764
|
| >3kst_A Endo-1,4-beta-xylanase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=98.44 E-value=9.2e-06 Score=81.72 Aligned_cols=149 Identities=17% Similarity=0.169 Sum_probs=93.8
Q ss_pred ccCCcceEEE--CCEEEEEeeeCCCCCCCCCcEEEEEEeCCCC-cceecCC-CCCCCCCccCCCeEeeeEEEcCCCceEE
Q 010428 58 INDPNGVMIY--KGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIPHDP-AIYPSQQSDINGCWSGSATILPGEKPAI 133 (511)
Q Consensus 58 ~NDPnG~~~~--~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLv-hW~~~~~-aL~P~~~~D~~g~~SGsav~~~dg~~~l 133 (511)
+..| -+++. +|+|||||..+ .+.+.|+|+|.. .|++... .+.. ..+..+++++++||++||
T Consensus 79 ~wAP-~v~~~~~~g~~yl~yt~~--------~~i~va~s~~p~Gpw~~~~~~p~~~------~~~iDp~vf~D~dG~~Yl 143 (306)
T 3kst_A 79 FWAP-EVYYVESKKKFYLFYSAE--------EHICVATSTTPEGPFRQEVKQPIWS------EKSIDTSLFIDDDGTPYL 143 (306)
T ss_dssp CEEE-EEEEETTTTEEEEEEEET--------TEEEEEEESSTTCCCBCSSCCCSSS------SCCEEEEEEECTTSCEEE
T ss_pred cccC-eEEEECCCCEEEEEEECC--------CcEEEEEcCCCCCCcEeCCCccccC------CCcccceEEEeCCCCEEE
Confidence 3456 35577 99999999975 268999999987 8997632 1211 345789998877899999
Q ss_pred EEeccCCCCcceEEEEE-ecCCCCcccceeeecCCCceecCCCCCcCC---CCCCCCCEEEEeCCCCeEEEEEeeec--C
Q 010428 134 FYTGIDPHNRQVQNLAV-PKNLSDPYLREWVKSPKNPLMAPDAMNQIN---TSSFRDPTTAWLGPDKRWRVIIGSKI--N 207 (511)
Q Consensus 134 ~YTg~~~~~~q~q~lA~-s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~---~~~fRDP~vvw~~~~g~w~m~~ga~~--~ 207 (511)
+|..... .+.+.+|. +.| +.+|.......++.+. ..++ ...+.-|.+ ++ .+|+|||++++.. .
T Consensus 144 ~~~~~~~--g~~i~~~~ls~d-----~~~~~~~~~~~~~~~~--~~w~~~~~~~~EgP~i-~k-~~G~YYL~~S~~~~~~ 212 (306)
T 3kst_A 144 YFVRFTD--GNVIWVAQMTDD-----LMSIKTETLNQCIKAE--VSWELLQGKVAEGPSL-LK-KNGVYYLIYSANHYEN 212 (306)
T ss_dssp EEEEESS--SEEEEEEEBCTT-----SSCBCGGGCEEEECCC--SGGGCSSSSBEEEEEE-EE-ETTEEEEEEEESCTTS
T ss_pred EEEEeCC--CCEEEEEEeCcc-----cccccCcceeeeccCC--ccceecCCCceecceE-EE-ECCEEEEEEEeCCCCC
Confidence 9975321 22344454 333 3566543222233222 1221 223457874 56 5899999997653 2
Q ss_pred CccEEEEEEcCCCC-CcEE-ccccccc
Q 010428 208 RKGLAILYRSKDFV-HWIK-AKHPLHS 232 (511)
Q Consensus 208 ~~G~i~ly~S~Dl~-~W~~-~~~~l~~ 232 (511)
..-++.+++|+++. .|+. .+.|+..
T Consensus 213 ~~y~v~~a~S~s~~GPw~~~~~~pil~ 239 (306)
T 3kst_A 213 KGYGVGYATSDTPMGPWVKYSKNPLLQ 239 (306)
T ss_dssp TTCEEEEEEESSTTCCCEECTTCCSBS
T ss_pred CCceEEEEEeCCCCCCCEeCCCCeeEe
Confidence 22268899999987 7997 3445544
|
| >1uv4_A Arabinase, arabinan-endo 1,5-alpha-L-arabinase; hydrolase, propeller, catalysis; 1.50A {Bacillus subtilis} SCOP: b.67.2.1 | Back alignment and structure |
|---|
Probab=98.38 E-value=2.9e-06 Score=84.55 Aligned_cols=155 Identities=15% Similarity=0.179 Sum_probs=95.8
Q ss_pred CccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCC--cceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEE
Q 010428 57 WINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI--NWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIF 134 (511)
Q Consensus 57 w~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLv--hW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~l~ 134 (511)
-+..| -+++++|+|||||..+..+. .....++|+|+|+. .|++.+..|..... +...+..+++++++||+.||+
T Consensus 72 ~~wAP-~v~~~~G~yylyyt~~~~~~--~~~~i~va~s~~p~~Gpw~~~~~~l~~~~~-~~~~~iDp~vf~d~dG~~Yl~ 147 (293)
T 1uv4_A 72 NQWAP-DIQYYNGKYWLYYSVSSFGS--NTSAIGLASSTSISSGGWKDEGLVIRSTSS-NNYNAIDPELTFDKDGNPWLA 147 (293)
T ss_dssp BCEEE-EEEEETTEEEEEEEECCTTC--SCEEEEEEEESCTTTTCCEEEEEEEEECTT-SSSCCCSCEEEECTTSCEEEE
T ss_pred ceecc-eEEEECCEEEEEEEecCCCC--CcceEEEEECCCCCCCCCccCCccEecCCC-CCCCCCCCCeEECCCCCEEEE
Confidence 35567 47789999999999765432 34678999999997 89987543433211 122456788887779999999
Q ss_pred EeccCCCCcceEEEEEe-cCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeec-----CC
Q 010428 135 YTGIDPHNRQVQNLAVP-KNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-----NR 208 (511)
Q Consensus 135 YTg~~~~~~q~q~lA~s-~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~-----~~ 208 (511)
|.+.. ..+.++.. .|. .++... ...++..+ . ....+..|. +++ .+|+|||++++.. +.
T Consensus 148 ~g~~~----~~i~~~~l~~d~-----~~~~g~-~~~i~~~~--~--~~~~~EgP~-i~k-~~g~yyL~~s~~~~~~g~~~ 211 (293)
T 1uv4_A 148 FGSFW----SGIKLTKLDKST-----MKPTGS-LYSIAARP--N--NGGALEAPT-LTY-QNGYYYLMVSFDKCCDGVNS 211 (293)
T ss_dssp ECBST----TCEEEEEECTTT-----CSEEEE-EEEEECCT--T--TTTCEEEEE-EEE-ETTEEEEEEEEECSSSSSCC
T ss_pred EEecC----CCEEEEEECchh-----CccCCc-ceEEeecC--C--CCCccCccE-EEE-ECCEEEEEEEeCCCcCCCCC
Confidence 97532 23444543 332 222211 01133222 1 123457888 456 5899999998752 12
Q ss_pred ccEEEEEEcCCCC-CcEEc-ccccc
Q 010428 209 KGLAILYRSKDFV-HWIKA-KHPLH 231 (511)
Q Consensus 209 ~G~i~ly~S~Dl~-~W~~~-~~~l~ 231 (511)
.-++.+++|+++. -|+.. +.|+.
T Consensus 212 ~y~~~~~~s~~~~GP~~~~~~~p~~ 236 (293)
T 1uv4_A 212 TYKIAYGRSKSITGPYLDKSGKSML 236 (293)
T ss_dssp EEEEEEEEESSTTCCCBCTTSCBGG
T ss_pred cceEEEEEeCCCCCCCCccCCCeee
Confidence 2257899999886 67764 34443
|
| >1gyh_A Arabinan endo-1,5-alpha-L-arabinosidase A; arabinanase, hydrolase, propeller, catalysis, pseudomonas; 1.89A {Cellvibrio cellulosa} SCOP: b.67.2.1 PDB: 1gyd_B 1gye_B* | Back alignment and structure |
|---|
Probab=98.24 E-value=1.5e-05 Score=80.43 Aligned_cols=164 Identities=14% Similarity=0.173 Sum_probs=96.5
Q ss_pred CCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCC--Cc----ceecCCCCCCCCCccCCCeEeeeEEEcCCC
Q 010428 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDL--IN----WIPHDPAIYPSQQSDINGCWSGSATILPGE 129 (511)
Q Consensus 56 gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DL--vh----W~~~~~aL~P~~~~D~~g~~SGsav~~~dg 129 (511)
+-+..| -+++++|+|||||..+..+. .....|+|+|+++ .. |++.+..+.+....+...+..+++++++||
T Consensus 62 ~~~wAP-~v~~~~g~~ylyyt~~~~~~--~~~~igva~s~~~dp~gp~~~w~~~~~v~~~~~~~~~~~~iDp~vf~D~dG 138 (318)
T 1gyh_A 62 GHLWAP-DIYQHKGLFYLYYSVSAFGK--NTSAIGVTVNKTLNPASPDYRWEDKGIVIESVPQRDLWNAIAPAIIADDHG 138 (318)
T ss_dssp SEEEEE-EEEEETTEEEEEEEECCTTS--CCEEEEEEEESCSCTTSTTCCCEEEEEEEEECTTTCSSCCCCCEEEECTTS
T ss_pred cccccC-eEEEECCEEEEEEEeccCCC--CcceEEEEEeCCCCCCCCCcceecCCcccccCCCCCCCCcccCCeEECCCC
Confidence 335567 47788999999999875432 3467899999983 23 998765443322222234568888887789
Q ss_pred ceEEEEeccCCCCcceEEEEEe-cCCC-CcccceeeecCCC--ce-ecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEee
Q 010428 130 KPAIFYTGIDPHNRQVQNLAVP-KNLS-DPYLREWVKSPKN--PL-MAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGS 204 (511)
Q Consensus 130 ~~~l~YTg~~~~~~q~q~lA~s-~d~~-d~~l~~w~K~~~n--PV-i~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga 204 (511)
++||+|.+.. ..+.+|.. .|.. ...+.+|+....+ ++ +... ......+.-|.+ ++ .+|+|||++++
T Consensus 139 ~~Yl~~g~~~----~~i~~~~l~~d~~~~g~~~~w~~~~~~~~~~~~~~~---~~~~~~~EgP~i-~k-~~g~yYL~~s~ 209 (318)
T 1gyh_A 139 QVWMSFGSFW----GGLKLFKLNDDLTRPAEPQEWHSIAKLERSVLMDDS---QAGSAQIEAPFI-LR-KGDYYYLFASW 209 (318)
T ss_dssp CEEEEECBST----TCEEEEEBCTTSSSBCSSCCEEEEECCCCCTTSCTT---SCCSCCEEEEEE-EE-ETTEEEEEEEE
T ss_pred CEEEEeeccC----CCEEEEEeCCccccccceeecceecccCcceeeccc---CCCCcceeccEE-EE-ECCEEEEEEEe
Confidence 9999997642 13445543 3311 0012456542111 21 1111 111234678884 56 58999999876
Q ss_pred e-----cCCccEEEEEEcCCCC-CcEEc-ccccc
Q 010428 205 K-----INRKGLAILYRSKDFV-HWIKA-KHPLH 231 (511)
Q Consensus 205 ~-----~~~~G~i~ly~S~Dl~-~W~~~-~~~l~ 231 (511)
. ....-++.+++|+++. -|+.. +.|+.
T Consensus 210 ~~~~~g~~~~y~~~~~rS~s~~GP~~~~~g~p~~ 243 (318)
T 1gyh_A 210 GLCCRKGDSTYHLVVGRSKQVTGPYLDKTGRDMN 243 (318)
T ss_dssp SCCSCGGGCCCEEEEEEESSTTSCCBCTTSBBGG
T ss_pred CCCcCCCCCcceEEEEEcCCCCCCCCcCCCCEee
Confidence 4 1222368899999875 67764 34443
|
| >3cu9_A Intracellular arabinanase; glycosyl hydrolase, high resolution, beta-prope geobacillus stearothermophilus, hydrolase; HET: GOL; 1.06A {Geobacillus stearothermophilus} PDB: 3d61_A* 3d60_A 3d5y_A 3d5z_A* 1wl7_A | Back alignment and structure |
|---|
Probab=98.18 E-value=6e-05 Score=75.80 Aligned_cols=158 Identities=16% Similarity=0.208 Sum_probs=93.5
Q ss_pred CCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCC---Cc---ceecCCCCCCCCCccCCCeEeeeEEEcCCC
Q 010428 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDL---IN---WIPHDPAIYPSQQSDINGCWSGSATILPGE 129 (511)
Q Consensus 56 gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DL---vh---W~~~~~aL~P~~~~D~~g~~SGsav~~~dg 129 (511)
+-+..| -+++++|+|||||..+..+. .....|+|+|+|+ -. |++.+..+.+.. .+...+..+++++++||
T Consensus 80 ~~~wAP-~v~~~~g~yylyyt~~~~~~--~~~~igva~s~~~dP~gp~~~w~~~~~~~~~~~-~~~~~~iDp~vf~D~dG 155 (314)
T 3cu9_A 80 DHLWAP-DICFYNGIYYLYYSVSTFGK--NTSVIGLATNQTLDPRDPDYEWKDMGPVIHSTA-SDNYNAIDPNVVFDQEG 155 (314)
T ss_dssp CEEEEE-EEEEETTEEEEEEEECCTTC--CCEEEEEEEESCSCTTSTTCCCEEEEEEEEECT-TSSSCCCSCEEEECTTS
T ss_pred CceecC-cEEEECCEEEEEEEeccCCC--CCceEEEEEeCCCCCCCCCcCcccCCeEecCCC-CCCCCccCCCeEEcCCC
Confidence 335567 46788999999999875432 2467899999984 23 998754333211 11223567888887799
Q ss_pred ceEEEEeccCCCCcceEEEEEecCCCCcccceeeecCCCce-ecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeec--
Q 010428 130 KPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPL-MAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-- 206 (511)
Q Consensus 130 ~~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPV-i~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~-- 206 (511)
+.||+|.+.. ..+.++..++... .... ...++ +... +.....+..|.+ ++ .+|+|||++++..
T Consensus 156 ~~Yl~~g~~~----~~i~~~~l~~d~~----~~~~-~~~~~~~~~~---~~~~~~~EgP~i-~k-~~G~yyL~~s~~~~~ 221 (314)
T 3cu9_A 156 QPWLSFGSFW----SGIQLIQLDTETM----KPAA-QAELLTIASR---GEEPNAIEAPFI-VC-RNGYYYLFVSFDFCC 221 (314)
T ss_dssp CEEEEECBST----TCEEEEECCTTTC----SCCT-TCCCEEEECC---SSSSCCEEEEEE-EE-ETTEEEEEEEESCCS
T ss_pred CEEEEEeccC----CcEEEEEECcccC----cccC-CCceEEeccc---CCCCCccCccEE-EE-ECCEEEEEEEcCCcc
Confidence 9999998742 1244554332211 1110 01121 2111 111234678884 56 5899999987641
Q ss_pred ---CCccEEEEEEcCCCC-CcEEc-ccccc
Q 010428 207 ---NRKGLAILYRSKDFV-HWIKA-KHPLH 231 (511)
Q Consensus 207 ---~~~G~i~ly~S~Dl~-~W~~~-~~~l~ 231 (511)
...-++.+++|+++. -|+.. +.++.
T Consensus 222 ~g~~~~y~~~~~~s~s~~GP~~~~~~~p~~ 251 (314)
T 3cu9_A 222 RGIESTYKIAVGRSKDITGPYVDKNGVSMM 251 (314)
T ss_dssp SGGGCCCEEEEEEESSTTSCCBCTTSCBGG
T ss_pred cCCCCcceEEEEEeCCCCCCCCcCCCCccc
Confidence 122267899999986 78765 44544
|
| >1w2t_A Beta fructosidase; hydrolase, glycosidase, invertase, raffinose; HET: SUC GLA CIT; 1.87A {Thermotoga maritima} SCOP: b.29.1.19 b.67.2.3 PDB: 1uyp_A* | Back alignment and structure |
|---|
Probab=98.18 E-value=1.1e-05 Score=85.26 Aligned_cols=130 Identities=10% Similarity=0.083 Sum_probs=86.4
Q ss_pred CCcceEEECCEEEEEeeeCCC-CCCC-CCcEEEEEEeCCCCccee--cCCCCCCCCCccCCCeEeeeEEEcCCCceEEEE
Q 010428 60 DPNGVMIYKGIYHLFYQYNPK-GAVW-GNIVWAHSTSKDLINWIP--HDPAIYPSQQSDINGCWSGSATILPGEKPAIFY 135 (511)
Q Consensus 60 DPnG~~~~~G~YHLFYQ~~P~-~~~~-g~~~WgHa~S~DLvhW~~--~~~aL~P~~~~D~~g~~SGsav~~~dg~~~l~Y 135 (511)
.|. ++..+|+|+|||..+.. ...+ .....++|+|+|+.+|++ ..++|.+...-.....-.++++. .+|+++|++
T Consensus 75 sgs-av~~~g~~~l~YTg~~~~~~~~~~~~~q~lA~S~D~~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~-~dg~~~m~~ 152 (432)
T 1w2t_A 75 SGS-AVEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLDFVKYDGNPVISKPPEEGTHAFRDPKVNR-SNGEWRMVL 152 (432)
T ss_dssp EEE-EEEETTEEEEEEEEEECCCSSCCCEEEEEEEEESSSSCCEECTTCCSBCSCSSTTEEEEEEEEEEE-CSSSEEEEE
T ss_pred eeE-EEEECCEEEEEEecCccCCCCCCceEEEEEEEeCCCCeEEecCCCceEeCCCccccccccCCEEEE-ECCEEEEEE
Confidence 353 45689999999997643 2222 346789999999999999 45666543210012345677665 489999999
Q ss_pred eccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeee
Q 010428 136 TGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSK 205 (511)
Q Consensus 136 Tg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~ 205 (511)
.+..........++.|+|. ++|+.. .++.... . ...+.-|.+ ++ .+|+|+|+++.+
T Consensus 153 g~~~~~~~g~i~ly~S~Dl-----~~W~~~--g~~~~~~--~---g~~~EcP~l-f~-~~g~~vL~~s~~ 208 (432)
T 1w2t_A 153 GSGKDEKIGRVLLYTSDDL-----FHWKYE--GAIFEDE--T---TKEIDCPDL-VR-IGEKDILIYSIT 208 (432)
T ss_dssp EEEETTTEEEEEEEEESSS-----SSCEEE--EEEEEET--T---CSCCEEEEE-EE-ETTEEEEEEEET
T ss_pred EEecCCCCcEEEEEECCCC-----CCceEc--cccccCC--C---CCEEECCeE-EE-ECCEEEEEEeCC
Confidence 8754333445778888774 899875 3444322 2 234778984 55 478999999874
|
| >3qee_A Beta-xylosidase/alpha-L-arabinfuranosidase, Gly43; 5-bladed beta propeller, hydrolase; 1.64A {Cellvibrio japonicus} PDB: 3qed_A* 3qef_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=8.8e-05 Score=74.58 Aligned_cols=144 Identities=9% Similarity=-0.038 Sum_probs=90.3
Q ss_pred ccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCC-ccee-cCC-CCCCC----CCccCCCeEeeeEEEcCCCc
Q 010428 58 INDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIP-HDP-AIYPS----QQSDINGCWSGSATILPGEK 130 (511)
Q Consensus 58 ~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLv-hW~~-~~~-aL~P~----~~~D~~g~~SGsav~~~dg~ 130 (511)
+.-| -+++++|+|||||..+..+..+ ....|.|+|+|.. .|++ .+. .+... ... ......+++++++||+
T Consensus 75 ~WAP-~i~~~~Gkyylyyt~~~~~~~~-~~~i~va~s~~p~Gpw~~~~~~pl~~~~~~~~~~~-~~~~iDp~vf~DddG~ 151 (307)
T 3qee_A 75 AWAS-QVIERNGKFYWYVTVRHDDTKP-GFAIGVAVGDSPIGPFKDALGKALITNDMTTDTPI-DWDDIDPSVFIDDDGQ 151 (307)
T ss_dssp EEEE-EEEEETTEEEEEEEEEECTTSC-SEEEEEEEESSTTCCCEESSSSCSBCGGGCCSSCC-SCCSCCCEEEECTTSC
T ss_pred ccCc-eEEEECCEEEEEEEeccCCCCC-ceEEEEEEECCCCCCCEeCCCCeeEecCccccCCC-CcCcccCceEECCCCC
Confidence 4457 4678999999999987654332 3678999999954 8998 343 33211 111 1235678888877899
Q ss_pred eEEEEeccCCCCcceEEEE-EecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCc
Q 010428 131 PAIFYTGIDPHNRQVQNLA-VPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRK 209 (511)
Q Consensus 131 ~~l~YTg~~~~~~q~q~lA-~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~ 209 (511)
+||+|.+.. ..++ .+.|. .+|.... ..|..+ . ..+.-|. +++ .+|+|||++++. ..
T Consensus 152 ~Yl~~g~~~------i~~~~l~~d~-----~~~~g~~--~~i~~~--~----~~~EgP~-i~k-~~g~YyL~~s~~--~~ 208 (307)
T 3qee_A 152 AYLFWGNTR------PRYAKLKKNM-----VELDGPI--RAIEGL--P----EFTEAIW-VHK-YQDNYYLSYAMG--FP 208 (307)
T ss_dssp EEEEECSSS------CEEEEECTTS-----SSEEEEE--EECCCC--T----TEEEEEE-EEE-CC-CEEEEEEET--TT
T ss_pred EEEEEeCCc------EEEEEECCcc-----ccccCce--EEeCCC--C----CccCceE-EEE-ECCEEEEEEECC--CC
Confidence 999997541 2233 34442 4555321 122212 1 1246788 466 689999999874 23
Q ss_pred cEEEEEEcCCCC-CcEEcc
Q 010428 210 GLAILYRSKDFV-HWIKAK 227 (511)
Q Consensus 210 G~i~ly~S~Dl~-~W~~~~ 227 (511)
-++.+++|+++. -|+..+
T Consensus 209 ~~~~~~~s~~~~GP~~~~~ 227 (307)
T 3qee_A 209 EKIGYAMGKSIKGPWVYKG 227 (307)
T ss_dssp TEEEEEEESSTTCCCEEEE
T ss_pred cEEEEEECCCCCCCcEECC
Confidence 467788999986 788753
|
| >3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A* | Back alignment and structure |
|---|
Probab=98.07 E-value=0.0001 Score=78.48 Aligned_cols=159 Identities=11% Similarity=0.146 Sum_probs=97.5
Q ss_pred CCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEE--eCCC--CcceecCCCCCCCCCccCCCeEeeeEEEcCCCce
Q 010428 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHST--SKDL--INWIPHDPAIYPSQQSDINGCWSGSATILPGEKP 131 (511)
Q Consensus 56 gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~--S~DL--vhW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~ 131 (511)
+-+..| -++|++|+|+|||.....+.. .....+.|+ |+|- =.|++.+..+.|.. ..+..+++++ +||++
T Consensus 74 ~~~WAP-~v~~~~Gkyylyys~~~~~~~-~~~~i~va~~~s~dp~~Gpw~~~g~~~~~~~----~~~IDp~vf~-ddG~~ 146 (468)
T 3akh_A 74 AHIWAP-EIHFIDGKWYVYFAAGSTSDV-WAIRMYVLESGAANPLTGSWTEKGQIATPVS----SFSLDATTFV-VNGVR 146 (468)
T ss_dssp EEEEEE-EEEEETTEEEEEEEEECSSCT-TCCEEEEEEECCSCTTTSCCEEEEECCCSSC----SCEEEEEEEE-ETTEE
T ss_pred CCEecc-eEEEECCEEEEEEEeECCCCC-CceeEEEEEccCCCCCCCCCcccceeecCCC----CCcCcCeEEE-ECCEE
Confidence 445677 477899999999987753221 234567765 8886 37999876565532 3477888887 79999
Q ss_pred EEEEeccCC--CCcceEEEEEecCCCCcccceeeecCCCcee-cCCCCCcCCC---CCCCCCEEEEeCCCCeEEEEEeee
Q 010428 132 AIFYTGIDP--HNRQVQNLAVPKNLSDPYLREWVKSPKNPLM-APDAMNQINT---SSFRDPTTAWLGPDKRWRVIIGSK 205 (511)
Q Consensus 132 ~l~YTg~~~--~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi-~~p~~~~~~~---~~fRDP~vvw~~~~g~w~m~~ga~ 205 (511)
||+|.+... ...+.+.+|..++. .+.. +.|+. ..+. ..++. ....-|+ +++ .+|+|||++++.
T Consensus 147 Yl~~g~~~~~~~~~~~i~i~~l~~~-----~~~~---g~~~~i~~~~-~~we~~g~~~~EGP~-i~k-~~G~YYL~ys~~ 215 (468)
T 3akh_A 147 HLAWAQRNPAEDNNTSLFIAKMANP-----WTIS---GTPTEISQPT-LSWETVGYKVNEGPA-VIQ-HGGKVFLTYSAS 215 (468)
T ss_dssp EEEEEECCTTSSSSBEEEEEEEEET-----TEEE---EEEEEEECCC-SGGGCSSSCBEEEEE-EEE-ETTEEEEEEEES
T ss_pred EEEEEccCCCCCCCCcEEEEEeCCC-----ceec---CccEEecCCC-cccccCCCccccCCE-EEE-ECCEEEEEEEeC
Confidence 999986532 12244556655442 2222 22332 2221 12221 1246787 456 589999998865
Q ss_pred c-CCccEEEEEEcC---CCCC---cEEccccccc
Q 010428 206 I-NRKGLAILYRSK---DFVH---WIKAKHPLHS 232 (511)
Q Consensus 206 ~-~~~G~i~ly~S~---Dl~~---W~~~~~~l~~ 232 (511)
. +..-++.+++|+ ++.. |+..+.|+..
T Consensus 216 g~~~~y~v~~a~s~~~~~~~gP~~w~~~~~pvl~ 249 (468)
T 3akh_A 216 ATDANYCLGMLSASASADLLNAASWTKSSQPVFK 249 (468)
T ss_dssp CSSTTCEEEEEEEETTSCTTSGGGCEECSSCSBC
T ss_pred CCCCCceEEEEEECCCCCCCCcHHhccCCceEEE
Confidence 3 222267788886 6654 9877656544
|
| >1yif_A Beta-1,4-xylosidase; glycosidase, xylan, structural genomics, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.29.1.23 b.67.2.1 | Back alignment and structure |
|---|
Probab=97.88 E-value=0.00086 Score=72.35 Aligned_cols=155 Identities=10% Similarity=0.106 Sum_probs=94.5
Q ss_pred CCCccCCcceEEECCEEEEEeeeCCC-CCCCCCcEEEEEEeCCCC-cceecCCCCCCCCCccCCCeEeeeEEEcCCCceE
Q 010428 55 KNWINDPNGVMIYKGIYHLFYQYNPK-GAVWGNIVWAHSTSKDLI-NWIPHDPAIYPSQQSDINGCWSGSATILPGEKPA 132 (511)
Q Consensus 55 ~gw~NDPnG~~~~~G~YHLFYQ~~P~-~~~~g~~~WgHa~S~DLv-hW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~ 132 (511)
.+-+.-| -++|++|+|||||..... +..+.....+.|+|+|.. .|++ ++.+ . ...+.++++.++||+.|
T Consensus 69 ~~~~WAP-~i~~~~g~~yl~yt~~~~~~g~~~~~~~~va~s~~p~Gpw~~-p~~~-~------~~~iDp~~f~D~dG~~Y 139 (533)
T 1yif_A 69 SGGVWAP-CLSYSDGKFWLIYTDVKVVDGAWKDCHNYLVTCETINGDWSE-PIKL-N------SSGFDASLFHDTDGKKY 139 (533)
T ss_dssp TCBBCSC-EEEEETTEEEEEEEEECCCSSSCCCEEEEEEEESSTTSCCCC-CEEC-C------CSCSCCEEEECTTSCEE
T ss_pred CCCEECc-eEEEECCEEEEEEEeccCCCCCcccccEEEEEeCCCCCCccc-cEEc-C------CCcCCCceEECCCCCEE
Confidence 3456788 478899999999996432 233345678999999986 6986 3323 1 12456888887799999
Q ss_pred EEEeccCC-CC---cceEEEEE-ecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecC
Q 010428 133 IFYTGIDP-HN---RQVQNLAV-PKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN 207 (511)
Q Consensus 133 l~YTg~~~-~~---~q~q~lA~-s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~ 207 (511)
|+|.+... .+ ...+.+|. +.|. .+... +...|+... ......-|+ +++ .+|+|||++++...
T Consensus 140 l~~~~~~~~~g~~~~~~i~~~~l~~d~-----~~~~g-~~~~i~~~~-----~~~~~EgP~-i~k-~~G~YYL~~s~gg~ 206 (533)
T 1yif_A 140 LLNMLWDHRIDRHSFGGIVIQEYSDKE-----QKLIG-KPKVIFEGT-----DRKLTEAPH-LYH-IGNYYYLLTAEGGT 206 (533)
T ss_dssp EEEEEECCCTTSCSEEEEEEEEEETTT-----TEECS-CCEEEECCC-----TTCCCEEEE-EEE-ETTEEEEEEEESCS
T ss_pred EEEEecccccCCCCCCCEEEEEECCcc-----CCCCC-CcEEEEcCC-----CCCccccce-EEE-ECCEEEEEEeCCCC
Confidence 99975321 11 23344553 3332 11111 112233221 112356788 456 58999999976432
Q ss_pred C-ccEEEEEEcCCCC-CcEEcc-cccc
Q 010428 208 R-KGLAILYRSKDFV-HWIKAK-HPLH 231 (511)
Q Consensus 208 ~-~G~i~ly~S~Dl~-~W~~~~-~~l~ 231 (511)
+ .-.+.+++|+++. -|+... .|+.
T Consensus 207 ~~~~~v~~~rs~s~~GP~~~~~~~pil 233 (533)
T 1yif_A 207 RYEHAATIARSANIEGPYEVHPDNPIL 233 (533)
T ss_dssp STTCEEEEEEESSTTCCCEECTTCCSE
T ss_pred CCCeEEEEEEECCCCceeeeCCCCceE
Confidence 2 2268899999886 798753 3443
|
| >3c2u_A Xylosidase/arabinosidase; tetramer, glycoside hydrolase, GH43, alpha-L- arabinofuranosidase; HET: B3P; 1.30A {Selenomonas ruminantium} PDB: 1y7b_A* 1yi7_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=0.00052 Score=74.25 Aligned_cols=155 Identities=14% Similarity=0.122 Sum_probs=93.9
Q ss_pred CCCccCCcceEEECCEEEEEeeeCCC-CCCCCCcEEEEEEeCCCCc-ceecCCCCCCCCCccCCCeEeeeEEEcCCCceE
Q 010428 55 KNWINDPNGVMIYKGIYHLFYQYNPK-GAVWGNIVWAHSTSKDLIN-WIPHDPAIYPSQQSDINGCWSGSATILPGEKPA 132 (511)
Q Consensus 55 ~gw~NDPnG~~~~~G~YHLFYQ~~P~-~~~~g~~~WgHa~S~DLvh-W~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~ 132 (511)
.+-+.-| -++|++|+|||||..... +..+.....+.|+|+|... |++ ++.+ + .....+++++++||+.|
T Consensus 69 ~~~~WAP-~i~~~~g~~yly~t~~~~~~g~~~~~~~~va~s~~p~Gpw~~-p~~~------~-~~~iDp~~f~DddG~~Y 139 (538)
T 3c2u_A 69 SGGIWAP-DLSYADGKFWLIYTDVKVVDGMWKDCHNYLTTAEDIKGPWSK-PILL------N-GAGFDASLFHDPSGKKY 139 (538)
T ss_dssp TCEECSC-EEEEETTEEEEEEEEECCCSSSCCCEEEEEEEESSTTCCCCC-CEEE------E-CSCSCCEEEECTTSCEE
T ss_pred CCCEECC-eEEEECCEEEEEEEeccCCCCCcccccEEEEEECCCCCCccc-cEec------C-CCcCCCeeEECCCCCEE
Confidence 3446678 478899999999995432 2223356789999999874 986 2222 1 12456888887789999
Q ss_pred EEEeccCC--C--CcceEEEEEecCCCCcccceeeecCCCc-eecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecC
Q 010428 133 IFYTGIDP--H--NRQVQNLAVPKNLSDPYLREWVKSPKNP-LMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN 207 (511)
Q Consensus 133 l~YTg~~~--~--~~q~q~lA~s~d~~d~~l~~w~K~~~nP-Vi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~ 207 (511)
|+|..... . ....+.+|..++.. ++ ..+.+ +|..+ . ......-|+ +++ .+|+|||++++...
T Consensus 140 l~~~~~~~~~~~~~~~~i~~~~l~~d~------~~-~~g~~~~i~~~--~--~~~~~EgP~-i~k-~~G~YYL~~s~gg~ 206 (538)
T 3c2u_A 140 LVNMYWDQRVYHHNFYGIALQEYSVAE------EK-LIGKPEIIYKG--T--DIAYTEGPH-LYY-INDMYYLMTAEGGT 206 (538)
T ss_dssp EEEEEECCCTTSCSEEEEEEEEEETTT------TE-ECSCCEEEECC--C--TTCCCEEEE-EEE-ETTEEEEEEEESCS
T ss_pred EEEEecCCccCCCCCCCEEEEEECCcc------CC-CCCCCEEEecC--C--CCCccccce-EEE-ECCEEEEEEecCCC
Confidence 99975321 1 12334455432211 11 11222 22222 1 112457888 456 58999999976532
Q ss_pred Ccc-EEEEEEcCCCC-CcEEcc-cccc
Q 010428 208 RKG-LAILYRSKDFV-HWIKAK-HPLH 231 (511)
Q Consensus 208 ~~G-~i~ly~S~Dl~-~W~~~~-~~l~ 231 (511)
+.+ ++.+++|+++. -|+... +|+.
T Consensus 207 ~~~~~~~~~rS~s~~GP~~~~~~~pil 233 (538)
T 3c2u_A 207 TYQHSETIARSKTIHGPYEIQPDYPLL 233 (538)
T ss_dssp STTCEEEEEEESSTTCCCEECTTCCSB
T ss_pred CCCeEEEEEEECCCCCCCccCCCCceE
Confidence 222 67899999986 788764 3444
|
| >3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=0.00041 Score=74.90 Aligned_cols=152 Identities=13% Similarity=0.049 Sum_probs=91.6
Q ss_pred ccCCcceEEE--CCEEEEEeeeCCCCCCCCCcEEEEEEeCCCC-cceecCC--CCCCCCCcc----CCCeEeeeEEEcCC
Q 010428 58 INDPNGVMIY--KGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIPHDP--AIYPSQQSD----INGCWSGSATILPG 128 (511)
Q Consensus 58 ~NDPnG~~~~--~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLv-hW~~~~~--aL~P~~~~D----~~g~~SGsav~~~d 128 (511)
+.-| -++|+ +|+|||||.... +..++....|.|+|+|.. .|++.+. .+......| ...+..+++++++|
T Consensus 117 ~WAP-~v~~~~~~Gkyymy~~~~~-~~~~~~~~igvats~~p~Gpw~~~g~~~p~~~~g~~~~~~~~~~~iDp~vf~D~d 194 (526)
T 3vsf_A 117 IERP-KVMYNASTGEFVMWMHWEN-GINYGQARAAVAYSKTPDGKFTYIRSFRPMQDTGVMDHGLPGYMSRDCNVFVDTD 194 (526)
T ss_dssp EEEE-EEEECTTTCCEEEEEEEEC-SSCSCCCEEEEEEESSSSSCCEEEEEECSSCTTCCEETTEESCCCCSEEEEECTT
T ss_pred eECC-EEEEECCCCEEEEEEEeeC-CCCCCcceEEEEEcCCCCCCCEeccccccccccccccCCCCCcccccccEEECCC
Confidence 4456 36665 899999999762 233456789999999987 7987532 111111111 23467788888889
Q ss_pred CceEEEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCC
Q 010428 129 EKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINR 208 (511)
Q Consensus 129 g~~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~ 208 (511)
|+.||+|.+... ....++.-.+. +..+... +...-+ + .....|. +++ .+|+|||++.+....
T Consensus 195 G~~Yl~~~~~~~---~~i~i~~l~~d----~~~~~~~---~~~~~~---g---~~~EgP~-i~k-~~G~YYL~~S~~tg~ 256 (526)
T 3vsf_A 195 GKGYFISAANEN---MDLHLYELTPD----YKNIASL---KAKLFV---G---QQREAPC-LIK-RNGYYYLITSGCTGW 256 (526)
T ss_dssp SCEEEEEEETTT---TEEEEEEECTT----SSSEEEE---EEEEST---T---SCCEEEE-EEE-SSSCEEEEEECCCTT
T ss_pred CCEEEEEEecCC---CceEEEEcCCC----cccccCc---eEEeCC---C---CCcCCeE-EEE-ECCEEEEEEcCCCCc
Confidence 999999986431 23344433221 1333331 111111 1 2357898 567 689999999754321
Q ss_pred -ccEEEEEEcCCCC-CcEEcccc
Q 010428 209 -KGLAILYRSKDFV-HWIKAKHP 229 (511)
Q Consensus 209 -~G~i~ly~S~Dl~-~W~~~~~~ 229 (511)
.-.+.+++|+++. -|+..+.+
T Consensus 257 ~~~~~~~a~S~s~~GPw~~~~~~ 279 (526)
T 3vsf_A 257 NPNQAKYAYSKDLASGWSQLYNL 279 (526)
T ss_dssp SCCCEEECEESCSSSCCCCCEEE
T ss_pred CCCceEEEEeCCCCCCceeCCcc
Confidence 1257788999876 57655433
|
| >1yrz_A Xylan beta-1,4-xylosidase; structural genomics, nysgxrc target T1997, PSI, structure initiative; 2.00A {Bacillus halodurans} SCOP: b.29.1.23 b.67.2.1 | Back alignment and structure |
|---|
Probab=97.84 E-value=0.00045 Score=74.48 Aligned_cols=156 Identities=12% Similarity=0.068 Sum_probs=93.6
Q ss_pred CCCccCCcceEEECCEEEEEeeeCCC-CCCCCCcEEEEEEeCCCC-cceecCCCCCCCCCccCCCeEeeeEEEcCCCceE
Q 010428 55 KNWINDPNGVMIYKGIYHLFYQYNPK-GAVWGNIVWAHSTSKDLI-NWIPHDPAIYPSQQSDINGCWSGSATILPGEKPA 132 (511)
Q Consensus 55 ~gw~NDPnG~~~~~G~YHLFYQ~~P~-~~~~g~~~WgHa~S~DLv-hW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~ 132 (511)
.+-+..| -++|++|+|||||..... +..+...+.+.|+|+|.. .|++ +..+ ......++++.++||+.|
T Consensus 71 ~~~~wAP-~i~~~~g~~yl~yt~~~~~~g~~~~~~~~va~s~~p~Gpw~~-p~~~-------~~~~iDp~vf~D~dG~~Y 141 (528)
T 1yrz_A 71 SGGIWAP-CLSYHDGTFYLIYTDVKQWHGAFKDAHNYLVTAQNIEGPWSD-PIYL-------NSSGFDPSLFHDDDGRKW 141 (528)
T ss_dssp TCEECSC-EEEEETTEEEEEEEEEEECSSSCCEEEEEEEEESSSSSCCCC-CEEC-------CCSCSCCEEEECTTSCEE
T ss_pred CCCEECC-eEEEECCEEEEEEecccCCCCCcccceEEEEEeCCCCCCccc-cEEC-------CCCcCCCceEECCCCCEE
Confidence 3446678 478899999999985421 222334568899999987 5986 2222 123567888887799999
Q ss_pred EEEeccCC-C---CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCC
Q 010428 133 IFYTGIDP-H---NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINR 208 (511)
Q Consensus 133 l~YTg~~~-~---~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~ 208 (511)
|+|..... . ....+.++..++.. .+.... ...|+... .......|+ +++ .+|+|||++++...+
T Consensus 142 l~~~~~~~~~~~~~~~~i~~~~l~~d~----~~~~g~-~~~i~~~~-----~~~~~EgP~-i~k-~~G~YYL~~s~~g~~ 209 (528)
T 1yrz_A 142 LVNMIWDYRKGNHPFAGIILQEYSEAE----QKLVGP-VKNIYKGT-----DIQLTEGPH-LYK-KDGYYYLLVAEGGTE 209 (528)
T ss_dssp EEEEEECCCTTSCSEEEEEEEEEETTT----TEEEEE-EEEEECCC-----TTCCCEEEE-EEE-ETTEEEEEEEESCSS
T ss_pred EEEeeccCCCCCCCCCeEEEEEECCcc----CCCCCC-CEEEEcCC-----CCCccCCCE-EEE-ECCEEEEEEeCCCCC
Confidence 99653211 1 12344555433211 122211 11233221 112356888 466 589999999865322
Q ss_pred -ccEEEEEEcCCCC-CcEEcc-cccc
Q 010428 209 -KGLAILYRSKDFV-HWIKAK-HPLH 231 (511)
Q Consensus 209 -~G~i~ly~S~Dl~-~W~~~~-~~l~ 231 (511)
.-++.+++|+++. .|+... .|+.
T Consensus 210 ~~~~~~~~rs~~~~GP~~~~~~~pil 235 (528)
T 1yrz_A 210 YEHAATLARSQSIDGPYETDPSYPLV 235 (528)
T ss_dssp TTCEEEEEEESSTTCCCEECTTCCSE
T ss_pred CCcEEEEEEECCCCCCCCcCCCCeEE
Confidence 2257899999987 798763 3443
|
| >3c7f_A Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta-propeller fold, beta-sandwich, xylan degradati hydrolase; HET: XYP; 1.55A {Bacillus subtilis} PDB: 3c7e_A* 3c7h_A* 3c7o_A* 3c7g_A* | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00028 Score=75.46 Aligned_cols=149 Identities=13% Similarity=0.132 Sum_probs=90.8
Q ss_pred ccCCcceEEE--C--CEEEEEeeeCCCCCCCCCcEEEEEEeCCCCc-ceec-C-CCCCCCC-Ccc-CCCeEeeeEEEcCC
Q 010428 58 INDPNGVMIY--K--GIYHLFYQYNPKGAVWGNIVWAHSTSKDLIN-WIPH-D-PAIYPSQ-QSD-INGCWSGSATILPG 128 (511)
Q Consensus 58 ~NDPnG~~~~--~--G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvh-W~~~-~-~aL~P~~-~~D-~~g~~SGsav~~~d 128 (511)
+..| -++++ + |+|||||... ....+.|+|+|... |++. + +.+.++. ..+ ...+..+++++++|
T Consensus 100 ~WAP-~v~~~~~~g~g~yylyyt~~-------~~~i~va~s~~p~Gpw~~~~g~pli~~~~~g~~~~~~~iDp~vf~Ddd 171 (487)
T 3c7f_A 100 SWAP-SIAVKKINGKDKFFLYFANS-------GGGIGVLTADSPIGPWTDPIGKPLVTPSTPGMSGVVWLFDPAVFVDDD 171 (487)
T ss_dssp CEEE-EEEEEEETTEEEEEEEEEST-------TBCEEEEEESSTTCCCBCSSSSCSBCTTSTTCTTCSSBCCCEEEECTT
T ss_pred Ccch-heEEEecCCCCeEEEEEEcC-------CcEEEEEEeCCCCCCcccCCCCeEeecCCCCccCCCCccCCceEEcCC
Confidence 4556 36665 4 6999999743 14689999999985 9975 3 2333221 111 12357899988889
Q ss_pred CceEEEEeccCCC----------CcceEEEE-EecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCe
Q 010428 129 EKPAIFYTGIDPH----------NRQVQNLA-VPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKR 197 (511)
Q Consensus 129 g~~~l~YTg~~~~----------~~q~q~lA-~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~ 197 (511)
|+.||+|.+.... ..+...+| .++| +.+|...+ ..|..| ..+..|. +++ .+|+
T Consensus 172 G~~Yl~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~d-----~~~~~g~~--~~i~~p-------~~~Egp~-i~k-~~G~ 235 (487)
T 3c7f_A 172 GTGYLYAGGGVPGVSNPTQGQWANPKTARVIKLGPD-----MTSVVGSA--STIDAP-------FMFEDSG-LHK-YNGT 235 (487)
T ss_dssp SCEEEEEECCCSSTTSCCHHHHHCCCCEEEEEECTT-----SSSEEEEE--EEECCT-------TEEEEEE-EEE-ETTE
T ss_pred CCEEEEECCcccCccccccccccCCCceEEEEECCC-----eeeccCcc--EEecCC-------ceEecce-EEE-ECCE
Confidence 9999999863211 11234444 4444 35676421 122222 1256787 456 5899
Q ss_pred EEEEEeeec--C-----CccEEEEEEcCCCC-CcEEccccc
Q 010428 198 WRVIIGSKI--N-----RKGLAILYRSKDFV-HWIKAKHPL 230 (511)
Q Consensus 198 w~m~~ga~~--~-----~~G~i~ly~S~Dl~-~W~~~~~~l 230 (511)
|||++++.. . ....+.+++|+++. -|+..+.++
T Consensus 236 YYl~ys~~~~~t~~~~~~~~~i~~~~S~s~~GP~~~~~~il 276 (487)
T 3c7f_A 236 YYYSYCINFGGTHPADKPPGEIGYMTSSSPMGPFTYRGHFL 276 (487)
T ss_dssp EEEEEEECSSSCCCTTSCTTSEEEEEESSTTCCCEEEEEEE
T ss_pred EEEEEECCCCCCcccCCCCceeEEEEcCCCCCCceECceec
Confidence 999887642 1 12367889999886 798764333
|
| >3ugf_A Sucrose:(sucrose/fructan) 6-fructosyltransferase; glycoside hydrolase family 32; HET: NAG FUC BMA MAN; 1.70A {Pachysandra terminalis} PDB: 3ugg_A* 3ugh_A* | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00032 Score=75.91 Aligned_cols=137 Identities=17% Similarity=0.228 Sum_probs=88.9
Q ss_pred EeCCCCcceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEEEeccCCC---CcceEEEEEecCCCCcccceeeecCCCc
Q 010428 93 TSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPH---NRQVQNLAVPKNLSDPYLREWVKSPKNP 169 (511)
Q Consensus 93 ~S~DLvhW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~l~YTg~~~~---~~q~q~lA~s~d~~d~~l~~w~K~~~nP 169 (511)
.|.++++|.+..--+.|...| +=.+..++..+|+|+|||.-+... +...-+.|+|+| |+||+..+ +
T Consensus 10 ~~~~~~~~~Rp~yH~~P~~gw----mNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHa~S~D-----LvhW~~~p--~ 78 (546)
T 3ugf_A 10 WSNAQLSWQRTAFHFQPERSW----MSDPDGPIFYKGWYHFFYQYNPDNPVWGNNTWGHTVSRD-----LIHWLYLP--L 78 (546)
T ss_dssp CCHHHHHHTSCSSSCCCSSEE----EEEEEEEEEETTEEEEEEEEESSCSSSCSCEEEEEEESS-----SSSCEECC--C
T ss_pred cchhhhhhcCCeEEEeCCCCC----ccCCceeEEECCEEEEEEecCCCCCCCCCcEEEEEEcCC-----cCccccCC--C
Confidence 366888998877667776432 112333344599999999865332 345678999998 48999863 6
Q ss_pred eecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecC-CccEEEEEEcCCC-----CCcEEcc-cccccCCC---CCce
Q 010428 170 LMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN-RKGLAILYRSKDF-----VHWIKAK-HPLHSVKG---TGMW 239 (511)
Q Consensus 170 Vi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~-~~G~i~ly~S~Dl-----~~W~~~~-~~l~~~~~---~g~w 239 (511)
+|.+. ..++....-.+.++.. ++|+++|++.+... ..-...++.|+|+ .+|+... +|+...+. ..-+
T Consensus 79 AL~P~--~~~D~~G~~SGSavv~-~dg~~~l~YTg~~~~~~q~q~lA~S~D~~d~~l~~w~K~~~nPVi~~p~g~~~~~f 155 (546)
T 3ugf_A 79 ALAAD--QWYDMQGVFSGSATCL-PDGRIMMLYTGVTKEMVEMLSLAYPADLSDPLLVEWVKYPGNPILSAPPGVSPTEF 155 (546)
T ss_dssp CBCSC--SGGGTTCEEEEEEEEC-TTSCEEEEEEEECTTCCEEEEEEEESCTTCTTCCCEEECTTCCCBCCCTTSCTTSC
T ss_pred CCCCC--cccccCCcCcceEEEe-eCCeEEEEEEeccCCCcEEEEEEEECCCCCCccceeEEcCCCceEeCCCCCCccee
Confidence 66554 3344444556665433 68999999887653 2334578889885 8999864 45554322 1346
Q ss_pred ecCc
Q 010428 240 ECPD 243 (511)
Q Consensus 240 ECPd 243 (511)
.-|.
T Consensus 156 RDPk 159 (546)
T 3ugf_A 156 RDAS 159 (546)
T ss_dssp CCBC
T ss_pred eccc
Confidence 7787
|
| >3nqh_A Glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.11A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.60 E-value=0.0002 Score=75.56 Aligned_cols=141 Identities=12% Similarity=0.178 Sum_probs=90.3
Q ss_pred CCcceEE--ECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCC-cceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEEEe
Q 010428 60 DPNGVMI--YKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYT 136 (511)
Q Consensus 60 DPnG~~~--~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLv-hW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~l~YT 136 (511)
.| -++| ++|+|||||..+..+ .+....|.|+|++.. .|++.++.+..+.. ..++.+++++++||+.||+|.
T Consensus 87 AP-~V~y~~~dGkYYLyyt~~~~~--~~~~~igVAtSdsP~GPwt~~gpl~~~g~~---~~~IDPsvF~DdDGk~YL~~g 160 (441)
T 3nqh_A 87 RV-KVMKCPSTGEYVMYMHADDMN--YKDPHIGYATCSTIAGEYKLHGPLLYEGKP---IRRWDMGTYQDTDGTGYLLLH 160 (441)
T ss_dssp EE-EEEECTTTCCEEEEEEEEETT--SCSCEEEEEEESSTTSCCEEEEECEETTEE---CCCCSEEEEECTTSCEEEEEG
T ss_pred Cc-eeEEEccCCEEEEEEEeCCCC--CCcceEEEEEeCCCCCCceEcceeecCCCc---ccccCceEEEeCCCCEEEEeC
Confidence 45 2566 599999999987432 245689999999965 79987654433221 134678999888999999996
Q ss_pred ccCCCCcceEEEE-EecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecC-CccEEEE
Q 010428 137 GIDPHNRQVQNLA-VPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN-RKGLAIL 214 (511)
Q Consensus 137 g~~~~~~q~q~lA-~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~-~~G~i~l 214 (511)
+. .++ .+.|. .+++.. ++.-.+ . .....|+ +++ .+|.|||+++.... ....+.+
T Consensus 161 ~~--------~I~eLs~D~-----~~~~g~---~~~i~~--g----~~~EgP~-i~K-~~G~YYL~~S~~~g~~~~~~~~ 216 (441)
T 3nqh_A 161 GG--------IVYRLSKDY-----RTAEEK---VVSGVG--G----SHGESPA-MFK-KDGTYFFLFSNLTSWEKNDNFY 216 (441)
T ss_dssp GG--------EEEEECTTS-----SSEEEE---EESCST--T----CCCEEEE-EEE-ETTEEEEEEECSCTTSCCCCEE
T ss_pred CC--------cEEEeCCcc-----ccccCc---eEEeCC--C----CceECcE-EEE-ECCEEEEEEeCCCCcCCCceEE
Confidence 42 233 34442 445432 221111 1 2356888 566 68999999986421 1123578
Q ss_pred EEcCCCC-CcEEccccc
Q 010428 215 YRSKDFV-HWIKAKHPL 230 (511)
Q Consensus 215 y~S~Dl~-~W~~~~~~l 230 (511)
++|+++. -|+..+.++
T Consensus 217 arS~s~~GPw~~~g~i~ 233 (441)
T 3nqh_A 217 FTAPSVKGPWTRQGLFA 233 (441)
T ss_dssp EEESSTTCCCEEEEESS
T ss_pred EEeCCCCCCceECCccC
Confidence 8999886 788776544
|
| >2x8s_A Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; 1.50A {Bacillus subtilis} PDB: 2x8f_A 2x8t_A 3lv4_A | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00065 Score=72.42 Aligned_cols=160 Identities=9% Similarity=0.029 Sum_probs=93.7
Q ss_pred CCccCCcceEE-ECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCC-cceecCCCCCCC--------CCcc---CCCeEeee
Q 010428 56 NWINDPNGVMI-YKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIPHDPAIYPS--------QQSD---INGCWSGS 122 (511)
Q Consensus 56 gw~NDPnG~~~-~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLv-hW~~~~~aL~P~--------~~~D---~~g~~SGs 122 (511)
+-+..|. +++ ++|+|||||.....+. +....|+|+|+|.. .|++.+..|... ..|+ ...+..++
T Consensus 97 ~~~WAP~-vi~~~dGkyylyys~~~~~~--~~~~IgvatSddp~GPw~~~g~~l~~~~~~~~~dg~~~~~~~~~~~IDp~ 173 (470)
T 2x8s_A 97 DTLWAAD-VTQLADGKYYMYYNACRGDS--PRSAMGVAVADNIEGPYKNKGIFLKSGMEGTSSDGTPYDATKHPNVVAPH 173 (470)
T ss_dssp SSCCCCE-EEECTTSCEEEEEEEECSSS--CCEEEEEEEESSTTCCCEEEEEEEEECCSSBCTTSSBCCTTTSCCSCCCE
T ss_pred CceECCe-EEEecCCEEEEEEEeccCCC--CccEEEEEEeCCCCCCceeCCeeeccCcccccccccccccccCCCCCCCC
Confidence 3466784 566 4899999998765432 34679999999998 599885444321 1222 23467889
Q ss_pred EEEcCCCceEEEEeccCCCCcceEEEEEec-CCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEE
Q 010428 123 ATILPGEKPAIFYTGIDPHNRQVQNLAVPK-NLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVI 201 (511)
Q Consensus 123 av~~~dg~~~l~YTg~~~~~~q~q~lA~s~-d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~ 201 (511)
+++++||+.||+|.+... .+.++..+ +.+.+ ..+... ...+.... .....-|+++.+..+|.|||+
T Consensus 174 vf~DdDG~~Yl~~g~~~~----gI~~~eL~~d~~~~--~~~~~~-~~~i~~g~------~~~~EGP~i~~~K~~G~YYL~ 240 (470)
T 2x8s_A 174 TFFDKDGKLWMVYGSYSG----GIFILEMNPKTGFP--LPGQGY-GKKLLGGN------HSRIEGPYVLYNPDTQYYYLY 240 (470)
T ss_dssp EEECTTSCEEEEECBSTT----CEEEEEBCTTTSSB--CTTCTT-CEEEECCS------SCSEEEEEEEEETTTTEEEEE
T ss_pred EEEcCCCCEEEEeeecCC----cEEEEEECCccCcC--cCCccc-ceEecCCC------CCceeccEEEEEccCCEEEEE
Confidence 988789999999976431 23444332 21111 111100 11122111 123467875432368999999
Q ss_pred Eeeec-C--CccEEEEEEcCCCC-CcEE-cccccc
Q 010428 202 IGSKI-N--RKGLAILYRSKDFV-HWIK-AKHPLH 231 (511)
Q Consensus 202 ~ga~~-~--~~G~i~ly~S~Dl~-~W~~-~~~~l~ 231 (511)
+++.. . ..-++.+++|+++. -|+. .+.++.
T Consensus 241 ~S~g~~~~~~~y~v~~arS~s~~GP~~~~~g~pl~ 275 (470)
T 2x8s_A 241 LSYGGLDATGGYNIRVARSKKPDGPYYDAEGNPML 275 (470)
T ss_dssp EEESBSSTTSBCEEEEEEESSTTCCCBCTTCCBGG
T ss_pred EEeCCCCCCCCceEEEEEECCCCCCCCcCCCCccc
Confidence 88643 1 12267899999875 6763 234443
|
| >3k1u_A Beta-xylosidase, family 43 glycosyl hydrolase; structural genomics, APC20493, family 43 GL hydrolase, PSI-2; HET: MSE; 1.55A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.007 Score=60.81 Aligned_cols=156 Identities=10% Similarity=0.118 Sum_probs=80.9
Q ss_pred cCCcceEEECCEEEEEeeeCCCCCCCC--CcEEEEEE-e--CCCC--cceecCCCCCCCCCccCCCeEeeeEEEcCCCce
Q 010428 59 NDPNGVMIYKGIYHLFYQYNPKGAVWG--NIVWAHST-S--KDLI--NWIPHDPAIYPSQQSDINGCWSGSATILPGEKP 131 (511)
Q Consensus 59 NDPnG~~~~~G~YHLFYQ~~P~~~~~g--~~~WgHa~-S--~DLv--hW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~ 131 (511)
.-| -+++++|+|+|||...+.+.... ..+...++ + .|-. .|++.+....+. ...+..++++.+ +|+.
T Consensus 75 WAP-~v~~~~G~yylyys~~~~~~~~~~~~~~~~~~~~~~~~gP~~~~~~~~~~~~~~~----~~~~IDp~vf~D-dd~~ 148 (330)
T 3k1u_A 75 WAP-EIHFINGAWYIYFAAAPDKNIEDDTFNHRMFVIQNENENPFTGNWVEKGRIKTAW----ESFSLDATIFEH-NEKL 148 (330)
T ss_dssp EEE-EEEEETTEEEEEEEEESSSCCBTTBCCCEEEEEEECSSSTTSSCCEEEEECCCSS----CSCEEEEEEEEE-TTEE
T ss_pred ECC-EEEEECCeEEEEEEeccCCCCCCcccceeeeEEEeCCCCCccccccccccccCCC----CCCccCceEEEE-CCcc
Confidence 346 47889999999999876543321 11222333 2 2222 476654322221 134678888876 5555
Q ss_pred EEEEeccCC--CCcceEEEEEecCCCCcccceeeecCCCcee-cCCCCCcCCC---CCCCCCEEEEeCCCCeEEEEEeee
Q 010428 132 AIFYTGIDP--HNRQVQNLAVPKNLSDPYLREWVKSPKNPLM-APDAMNQINT---SSFRDPTTAWLGPDKRWRVIIGSK 205 (511)
Q Consensus 132 ~l~YTg~~~--~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi-~~p~~~~~~~---~~fRDP~vvw~~~~g~w~m~~ga~ 205 (511)
+++|.+... ...+.+.++..++. . + ....|+. ..+. ..++. .-..-|++ ++ .+|.|||++++.
T Consensus 149 ~~~~~~~~~~~~~~~~i~i~~l~~~-----~--~-~~g~~~~i~~~~-~~~e~~~~~~~EGp~i-~k-~~G~YYL~ys~~ 217 (330)
T 3k1u_A 149 YYVWAQQDINIKGHSNIYIAEMENP-----W--T-LKTKPVMLTKPE-LEWEIKGFWVNEGPAV-LK-KNGKIFITYSAS 217 (330)
T ss_dssp EEEEEECCTTSSSSBEEEEEEEEET-----T--E-ECSCCEEEECSC-SGGGCSSSCBEEEEEE-EE-ETTEEEEEEEES
T ss_pred EEEEeecCCCcCCCceEEEEECCCC-----c--c-ccCCcEEecCCC-ccccccCCceeeCCEE-EE-ECCEEEEEEEeC
Confidence 555655432 23344555544332 1 1 1233433 2221 11111 12367884 56 589999999865
Q ss_pred c-CCccEEEEEEcCCCC------CcEEcccccc
Q 010428 206 I-NRKGLAILYRSKDFV------HWIKAKHPLH 231 (511)
Q Consensus 206 ~-~~~G~i~ly~S~Dl~------~W~~~~~~l~ 231 (511)
. ...=++.+++|+... .|+....++.
T Consensus 218 ~~~~~y~~~~~~s~~~~gP~~~~~~~~~~~pi~ 250 (330)
T 3k1u_A 218 ATDVNYCIGMLTAEENSNLLDKNSWTKSQTPVF 250 (330)
T ss_dssp CSSTTCEEEEEEEETTSCTTSGGGCEECSSCSB
T ss_pred CCCCCceEEEEEECCCCCCCCCccccccCCCEE
Confidence 4 222256777776543 4776555443
|
| >2exh_A Beta-D-xylosidase; glykosidase, hydrolsase, family43, hydrolase; HET: MES; 1.88A {Geobacillus stearothermophilus} SCOP: b.29.1.23 b.67.2.1 PDB: 2exi_A* 2exj_A* 2exk_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=0.0019 Score=69.69 Aligned_cols=151 Identities=10% Similarity=0.015 Sum_probs=91.5
Q ss_pred CCCccCCcceEEECCEEEEEeeeCCC-CCCCCCcEEEEEEeCCCC-cceecCCCCCCCCCccCCCeEeeeEEEcCCCceE
Q 010428 55 KNWINDPNGVMIYKGIYHLFYQYNPK-GAVWGNIVWAHSTSKDLI-NWIPHDPAIYPSQQSDINGCWSGSATILPGEKPA 132 (511)
Q Consensus 55 ~gw~NDPnG~~~~~G~YHLFYQ~~P~-~~~~g~~~WgHa~S~DLv-hW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~ 132 (511)
.+-+.-| -++|++|+|||||..... ...+.....+.|+|+|.. .|++ ++.+. .....+++++++||+.|
T Consensus 70 ~~~~WAP-~i~~~~g~~ylyyt~~~~~~g~~~~~~~~va~s~~~~Gpw~~-p~~~~-------~~~iDp~vf~DddG~~Y 140 (535)
T 2exh_A 70 SGGVWAP-HLSYSDGKFWLIYTDVKVVEGQWKDGHNYLVTCDTIDGAWSD-PIYLN-------SSGFDPSLFHDEDGRKY 140 (535)
T ss_dssp TCBBCSC-EEEEETTEEEEEEEEECCCSSSCCCEEEEEEEESSTTSCCCC-CEECC-------CSCSCCEEEECTTSCEE
T ss_pred CCCEECC-eEEEECCEEEEEEEeccCCCCCccccceEEEEeCCCCCCccc-cEecC-------CCcCCCceEECCCCCEE
Confidence 4556788 478899999999996432 222334678999999976 5986 22221 13466888887789999
Q ss_pred EEEeccCC-CC---cceEEEEE-ecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecC
Q 010428 133 IFYTGIDP-HN---RQVQNLAV-PKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN 207 (511)
Q Consensus 133 l~YTg~~~-~~---~q~q~lA~-s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~ 207 (511)
|+|..... .. ...+.++. +.|. +..... ...|+.+. + .....-|+ +++ .+|+|||++++...
T Consensus 141 l~~~~~~~~~~~~~~~~i~~~~l~~d~----~~~~g~--~~~i~~~~---~--~~~~EgP~-i~k-~~G~YYL~~s~ggt 207 (535)
T 2exh_A 141 LVNMYWDHRVDHHPFYGIVLQEYSVEQ----KKLVGE--PKIIFKGT---D--LRITEGPH-LYK-INGYYYLLTAEGGT 207 (535)
T ss_dssp EEEEEECCCTTSCSEEEEEEEEEETTT----TEEEEE--EEEEECCC---T--TCCCEEEE-EEE-ETTEEEEEEEESCS
T ss_pred EEEEecCCccCCCCCCcEEEEEECCcc----CCCCCC--cEEEEcCC---C--CCccccce-EEE-ECCEEEEEEeCCCC
Confidence 99875321 11 12344443 3332 111111 12233221 1 12356888 456 58999999976432
Q ss_pred Cc-cEEEEEEcCCCC-CcEEcc
Q 010428 208 RK-GLAILYRSKDFV-HWIKAK 227 (511)
Q Consensus 208 ~~-G~i~ly~S~Dl~-~W~~~~ 227 (511)
+. -.+.+++|+++. -|+...
T Consensus 208 ~~~~~~~~~rs~s~~GP~~~~~ 229 (535)
T 2exh_A 208 RYNHAATIARSTSLYGPYEVHP 229 (535)
T ss_dssp STTCEEEEEEESSTTCCCEECT
T ss_pred CCCeEEEEEEeCCCCCCCccCC
Confidence 22 267899999986 788754
|
| >1w18_A Levansucrase; transferase, fructosyl transferase, glycosyltransferase; 2.5A {Gluconacetobacter diazotrophicus} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.0012 Score=70.18 Aligned_cols=127 Identities=13% Similarity=0.194 Sum_probs=81.0
Q ss_pred ECCEEEEEeeeCCCCCC-CC------CcEEE------EEEeCC---CCcceecCCCCCCCCC-cc------CCCeEeeeE
Q 010428 67 YKGIYHLFYQYNPKGAV-WG------NIVWA------HSTSKD---LINWIPHDPAIYPSQQ-SD------INGCWSGSA 123 (511)
Q Consensus 67 ~~G~YHLFYQ~~P~~~~-~g------~~~Wg------Ha~S~D---LvhW~~~~~aL~P~~~-~D------~~g~~SGsa 123 (511)
.+|+|||||...-.... .| ...++ |+ |+| +.+|+++++.+.+++. |+ ....=.+.+
T Consensus 173 ~dG~i~LFYTg~~~~~~~~g~~~~~~~Q~Ia~a~~~l~a-~~dgv~~~~w~k~~~l~~~DG~~Yqt~~q~~~~~fRDP~v 251 (493)
T 1w18_A 173 HGNTVSVFYTDVAFNRDANANNITPPQAIITQTLGRIHA-DFNHVWFTGFTAHTPLLQPDGVLYQNGAQNEFFNFRDPFT 251 (493)
T ss_dssp TSCEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEEEEE-CSSCEEEEEEEEEEEEECCCSSSBCCTTTCTTCCCEEEEE
T ss_pred CCCEEEEEEEecccccccccccCCcceeEEEEeccceec-cCCCccccccccCCceeecCccccccccccCCccccCCEE
Confidence 59999999997643211 11 23455 33 444 5789988877888642 22 123445777
Q ss_pred EEcC--CCceEEEEeccCCCC----------------------------------cceEEEEEecCCCCcccceeeecCC
Q 010428 124 TILP--GEKPAIFYTGIDPHN----------------------------------RQVQNLAVPKNLSDPYLREWVKSPK 167 (511)
Q Consensus 124 v~~~--dg~~~l~YTg~~~~~----------------------------------~q~q~lA~s~d~~d~~l~~w~K~~~ 167 (511)
+.++ ||+.||++.++.... ...++||...+. .+..|+-.
T Consensus 252 f~D~~~dG~~YmvFeant~~~~g~~~~~~~~~~y~~~~~~~~~~~~~~~~~a~~~~g~IGLa~~~s~---Dl~~We~~-- 326 (493)
T 1w18_A 252 FEDPKHPGVNYMVFEGNTAGQRGVANCTEADLGFRPNDPNAETLQEVLDSGAYYQKANIGLAIATDS---TLSKWKFL-- 326 (493)
T ss_dssp EECTTSTTCEEEEEEEEBSSCTTCCCCCHHHHCCCTTCTTCCCHHHHHHTTGGGCCEEEEEEEESST---TSCCEEEE--
T ss_pred EecCCCCCCEEEEEEeccCCCCcccccccccccccCCccccchhhhcccccchhccceEEEEEeCCC---CCccceec--
Confidence 7765 389999998864311 234566877643 25789864
Q ss_pred CceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeee
Q 010428 168 NPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSK 205 (511)
Q Consensus 168 nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~ 205 (511)
.|++..+ . ....+.-|.|+ + .+|+|||+...+
T Consensus 327 ~PL~~a~--~--v~deiErP~V~-~-~~GkyYLFtSs~ 358 (493)
T 1w18_A 327 SPLISAN--C--VNDQTERPQVY-L-HNGKYYIFTISH 358 (493)
T ss_dssp EEEEECT--T--TBSCCEEEEEE-E-ETTEEEEEEEEC
T ss_pred CccccCC--C--CCCcEECCeEE-E-ECCEEEEEEEcc
Confidence 5787655 2 12456788864 4 489999998866
|
| >1st8_A Fructan 1-exohydrolase IIA; five fold beta propeller; HET: NDG NAG MAN; 2.35A {Cichorium intybus} PDB: 2add_A* 2ade_A* 2aey_A* 2aez_A* | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0061 Score=66.06 Aligned_cols=117 Identities=16% Similarity=0.260 Sum_probs=74.6
Q ss_pred eeeEEEcCCCceEEEEeccCCC---Cc-ceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCC
Q 010428 120 SGSATILPGEKPAIFYTGIDPH---NR-QVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPD 195 (511)
Q Consensus 120 SGsav~~~dg~~~l~YTg~~~~---~~-q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~ 195 (511)
.+..++..+|+|+|||.-+... +. ..-+.|+|+| |+||+.. .|+|.+. ..++....-.+.++.. ++
T Consensus 22 DPnG~~~~~G~yHlFYQ~~P~~~~~g~~~~WgHa~S~D-----lv~W~~~--~~aL~P~--~~~D~~Gv~SGsav~~-~d 91 (543)
T 1st8_A 22 DPNGPMLYQGVYHFFYQYNPYAATFGDVIIWGHAVSYD-----LVNWIHL--DPAIYPT--QEADSKSCWSGSATIL-PG 91 (543)
T ss_dssp EEEEEEEETTEEEEEEEEESSCSSCCSCCEEEEEEESS-----SSSEEEC--CCSBCCC--SGGGTTEEEEEEEEEE-TT
T ss_pred CCcccEEECCEEEEEEeeCCCCCCCCCccEEEEEECCC-----ccceEEC--CeeccCC--CccccCCEEcceEEEe-eC
Confidence 3444444599999999876442 23 5678999998 4899986 4677554 3333333445554443 58
Q ss_pred CeEEEEEeee-cCCccEEEEEEcCCC-----CCcEEcc-cccccCCCC---CceecCc-eEE
Q 010428 196 KRWRVIIGSK-INRKGLAILYRSKDF-----VHWIKAK-HPLHSVKGT---GMWECPD-FFP 246 (511)
Q Consensus 196 g~w~m~~ga~-~~~~G~i~ly~S~Dl-----~~W~~~~-~~l~~~~~~---g~wECPd-lf~ 246 (511)
|+++|++.+. .++.....++.|+|. .+|+... +|+...+.. .-+.-|. ++.
T Consensus 92 g~~~l~YTg~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPVi~~~~g~~~~~fRDP~vvw~ 153 (543)
T 1st8_A 92 NIPAMLYTGSDSKSRQVQDLAWPKNLSDPFLREWVKHPKNPLITPPEGVKDDCFRDPSTAWL 153 (543)
T ss_dssp TEEEEEEEEECTTSCEEEEEEEESCTTCTTCCCEEECTTCCSBCCCTTCCTTSEECCCCCEE
T ss_pred CEEEEEEEEeCCCCcEEEEEEEECCCCCCCcceeEEcCCCcEEeCCCCCCcCccCCCeEEEE
Confidence 9999998773 333445668888775 8999863 455443322 3577787 444
|
| >1oyg_A Levansucrase; glycoside hydrolase, beta-propeller, TR; 1.50A {Bacillus subtilis} SCOP: b.67.2.2 PDB: 1pt2_A* 3byl_A 3byn_A* 3byk_A 3byj_A 2vdt_A 3om4_A* 3om7_C* 3om6_A* 3om5_A* 3om2_A* | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0058 Score=64.53 Aligned_cols=146 Identities=10% Similarity=0.109 Sum_probs=89.2
Q ss_pred eEE-ECCEEEEEeeeCCCCCCCCCcEEEEEE-----eCCC---CcceecCCCCCCCCC-c---c------------CCCe
Q 010428 64 VMI-YKGIYHLFYQYNPKGAVWGNIVWAHST-----SKDL---INWIPHDPAIYPSQQ-S---D------------INGC 118 (511)
Q Consensus 64 ~~~-~~G~YHLFYQ~~P~~~~~g~~~WgHa~-----S~DL---vhW~~~~~aL~P~~~-~---D------------~~g~ 118 (511)
.+. .+|++||||..+-... .....+.+|. |+|. ..|++..+.+.++.. | + ....
T Consensus 141 Ai~~~dG~i~LfYTg~~~~~-~~~q~I~~a~~~l~~~~dgv~~~~~~~~~~l~~~Dg~~Yq~~~q~~~~~~~~~~~~~~f 219 (447)
T 1oyg_A 141 ATFTSDGKIRLFYTDFSGKH-YGKQTLTTAQVNVSASDSSLNINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTL 219 (447)
T ss_dssp EEECTTSCEEEEEEEEEGGG-TTEEEEEEEEEEEEECSSCEEEEEEEEEEEEECCCSSSBCCHHHHHHHTGGGGTCCCCC
T ss_pred eEECcCCEEEEEEEeecCCC-CCceEEEEEecceeecCCCcceecccCCCceEcCCCccccccccccccccccCCCcccc
Confidence 344 5999999999764321 1234567776 6785 466666677777642 2 1 1233
Q ss_pred EeeeEEEcCCCceEEEEeccCCCC-----------------------------------------cceEEEEE-ecCCCC
Q 010428 119 WSGSATILPGEKPAIFYTGIDPHN-----------------------------------------RQVQNLAV-PKNLSD 156 (511)
Q Consensus 119 ~SGsav~~~dg~~~l~YTg~~~~~-----------------------------------------~q~q~lA~-s~d~~d 156 (511)
=.+-++. .+|++||+..++.... .-.++|+. |+|
T Consensus 220 RDP~Vf~-d~G~~ymvfgA~t~~~~g~~~~~~l~~w~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~G~Igl~~~s~D--- 295 (447)
T 1oyg_A 220 RDPHYVE-DKGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDD--- 295 (447)
T ss_dssp EEEEEEE-ETTEEEEEEEEEBCTTSCCSSGGGGGBGGGTCSCHHHHHHHHHHHHHSTTHHHHHHCCEEEEEEEECTT---
T ss_pred CCCeEEe-ECCEEEEEEeeecCCCCcccchhhhcchhhcccCcccchhhhhhcccccccccchhcCcEEEEEEcCCC---
Confidence 3466665 4899999998865421 12445553 444
Q ss_pred cccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecC-C-------ccE-EEEEEcCCCC-CcE
Q 010428 157 PYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN-R-------KGL-AILYRSKDFV-HWI 224 (511)
Q Consensus 157 ~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~-~-------~G~-i~ly~S~Dl~-~W~ 224 (511)
+..|+-. .|++.+. .. ...+.-|.+ ++ .+|+|||++..+.. . .+. +..|.|+.+. .|+
T Consensus 296 --l~~W~~~--~pL~~~~---~v-~d~~EcPdl-fk-~dGkyyLf~S~~~s~~~~~g~~~~~vy~~g~vsdsl~GPy~ 363 (447)
T 1oyg_A 296 --YTLKKVM--KPLIASN---TV-TDEIERANV-FK-MNGKWYLFTDSRGSKMTIDGITSNDIYMLGYVSNSLTGPYK 363 (447)
T ss_dssp --SSEEEEE--EEEEECT---TT-CSCCEEEEE-EE-ETTEEEEEEEEEGGGCCCTTCCTTCEEEEEEEESSTTCCCE
T ss_pred --CCCceEc--cccccCC---CC-CCceEcCcE-EE-ECCEEEEEEecCCCcccccCcCCCcEEEEEEEcCCCCCCCe
Confidence 4789864 5777543 11 234778984 55 58999999987641 1 123 3467899885 464
|
| >4ffh_A Levan fructotransferase; glycoside hydrolase; HET: SUC; 2.20A {Arthrobacter ureafaciens} PDB: 4ffi_A* 4ffg_A* 4fff_A | Back alignment and structure |
|---|
Probab=96.87 E-value=0.015 Score=62.32 Aligned_cols=112 Identities=9% Similarity=0.038 Sum_probs=72.4
Q ss_pred EEEcCCCceEEEEeccCCC--CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCC----
Q 010428 123 ATILPGEKPAIFYTGIDPH--NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDK---- 196 (511)
Q Consensus 123 av~~~dg~~~l~YTg~~~~--~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g---- 196 (511)
.++..+|+|+|||.-+... ... -+.|+|+| |+||+..+ ++|.+. + ....-.+.++-. +++
T Consensus 18 G~~y~~G~YHlFYQ~~P~~~~~g~-WgHa~S~D-----LvhW~~~~--~aL~P~--~---~~g~~SGSav~~-~~~~~g~ 83 (492)
T 4ffh_A 18 RPVTTHGAYQLYYLHSDQNNGPGG-WDHASTTD-----GVAFTHHG--TVMPLR--P---DFPVWSGSAVVD-TANTAGF 83 (492)
T ss_dssp EEEEETTEEEEEEEEESSTTCCCE-EEEEEESS-----SSSCEEEE--EEECCB--T---TBCCCCEEEEEE-TTCSSSS
T ss_pred eeEEECCEEEEEEECCCCCCCCCc-EEEEEeCC-----CCccEECC--CCCCCC--C---CCCEEeceEEEe-CCCcccc
Confidence 3344599999999865331 122 78999998 48999863 555433 1 233456665544 455
Q ss_pred ---eEEEEEeeecC---CccEEEEEEcCC-CCCcEEcccccccCCCCCc------------eecCceEEec
Q 010428 197 ---RWRVIIGSKIN---RKGLAILYRSKD-FVHWIKAKHPLHSVKGTGM------------WECPDFFPVS 248 (511)
Q Consensus 197 ---~w~m~~ga~~~---~~G~i~ly~S~D-l~~W~~~~~~l~~~~~~g~------------wECPdlf~l~ 248 (511)
.++|++.+... ..-...++.|+| +.+|+..++|+...+...- |.-|.+|.-.
T Consensus 84 ~~~~~~l~YTg~~~~~~~~q~q~lA~S~D~g~~w~k~~nPvi~~p~~~~~~~~~~~~~~~~fRDP~V~~~~ 154 (492)
T 4ffh_A 84 GAGAVVALATQPTDGVRKYQEQYLYWSTDGGFTFTALPDPVIVNTDGRAATTPAEIENAEWFRDPKIHWDT 154 (492)
T ss_dssp CTTEEEEEEEEEGGGCGGGEEEEEEEESSSSSSCEECSSCSBCCTTTTTCCSHHHHHHHTCEEEEEEEEET
T ss_pred CCCcEEEEEeecccCCCCcEEEEEEEeCCCCceEEEcCccccCCCCccccccccccccCCCCcCCEEEEEC
Confidence 48888876542 233566888988 7899987556654333223 7889999864
|
| >2ac1_A Invertase; five fold beta propeller, hydrolase; HET: NAG MAN; 2.15A {Arabidopsis thaliana} PDB: 2xqr_A* 2oxb_A* 2qqw_A* 2qqv_A* 2qqu_A* | Back alignment and structure |
|---|
Probab=96.81 E-value=0.013 Score=63.34 Aligned_cols=117 Identities=13% Similarity=0.231 Sum_probs=74.7
Q ss_pred eeeEEEcCCCceEEEEeccCCC---CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCC
Q 010428 120 SGSATILPGEKPAIFYTGIDPH---NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDK 196 (511)
Q Consensus 120 SGsav~~~dg~~~l~YTg~~~~---~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g 196 (511)
.+..++..+|+|+|||.-+... +...-+.|+|+| |+||+.. .|+|.+. ..++....-.+.++.. ++|
T Consensus 23 DPnG~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~D-----lv~W~~~--~~aL~P~--~~~D~~G~~SGsav~~-~dg 92 (541)
T 2ac1_A 23 DPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTD-----LINWDPH--PPAIFPS--APFDINGCWSGSATIL-PNG 92 (541)
T ss_dssp EEEEEEEETTEEEEEEEECTTCSSSCSCEEEEEEESS-----SSSBEEE--EEEECCC--SGGGTTCEEEEEEEEC-TTS
T ss_pred CCCccEEECCEEEEEEeeCCCCCCCCCcEEEEEECCC-----ccceEEC--ceeecCC--CccccCCEEcceEEEe-eCC
Confidence 3443444599999999976442 345668899998 4899986 4677554 3344334445665433 588
Q ss_pred eEEEEEeeec-CCccEEEEEEcCCC-----CCcEEcc-cccccCC--C---CCceecCc-eEE
Q 010428 197 RWRVIIGSKI-NRKGLAILYRSKDF-----VHWIKAK-HPLHSVK--G---TGMWECPD-FFP 246 (511)
Q Consensus 197 ~w~m~~ga~~-~~~G~i~ly~S~Dl-----~~W~~~~-~~l~~~~--~---~g~wECPd-lf~ 246 (511)
+++|++.+.. +......++.|+|. .+|+... +|+...+ . ..-+.-|. ++.
T Consensus 93 ~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~nPVi~~~~~~~~~~~~fRDP~vvw~ 155 (541)
T 2ac1_A 93 KPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWL 155 (541)
T ss_dssp CEEEEEEEECTTSCEEEEEEEESCTTCTTCCCEEECTTCCSBCCCTTTCCCTTSEECCCCCEE
T ss_pred EEEEEEEEeCCCCcEEEEEEEECCCCCCCceeEEecCCCcEEcCCCCCCCCCCceECCeEEeE
Confidence 9999987743 33445668888774 8999864 4554433 1 23577787 444
|
| >1y4w_A EXO-inulinase; glycoside hydrolase FAMI crystallographic structure, native structure, hydrolase; HET: NAG; 1.55A {Aspergillus awamori} SCOP: b.29.1.19 b.67.2.3 PDB: 1y9g_A* 1y9m_A* | Back alignment and structure |
|---|
Probab=96.79 E-value=0.014 Score=62.79 Aligned_cols=123 Identities=10% Similarity=0.048 Sum_probs=74.8
Q ss_pred eeEEEcCCCceEEEEeccCCC---CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCC-
Q 010428 121 GSATILPGEKPAIFYTGIDPH---NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDK- 196 (511)
Q Consensus 121 Gsav~~~dg~~~l~YTg~~~~---~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g- 196 (511)
+..++..+|+|+|||.-+... +...-+.|+|+| |+||+.. .++|.++..+..+....-++.++-. .+|
T Consensus 23 PnG~~~~~G~yHlfyQ~~P~~~~wg~~~WgHa~S~D-----lv~W~~~--~~al~~~g~P~~d~~g~~SGsav~~-~~~~ 94 (518)
T 1y4w_A 23 PNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISED-----LTHWEEK--PVALLARGFGSDVTEMYFSGSAVAD-VNNT 94 (518)
T ss_dssp EEEEEEETTEEEEEEEECTTCSSSCSCEEEEEEESS-----SSSCEEE--EEEECCBTTTSCCCBEEEEEEEEEC-TTCT
T ss_pred CCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCC-----CccEEEC--CceEecCCCCCCCCCceEeeeEEEc-CCCc
Confidence 343333599999999865331 345678999998 4899986 2555111001122234456665433 443
Q ss_pred ---------eEEEEEeeecC-C------------ccEEEEEEcCC-CCCcEEc--ccccccCCC------CCceecCceE
Q 010428 197 ---------RWRVIIGSKIN-R------------KGLAILYRSKD-FVHWIKA--KHPLHSVKG------TGMWECPDFF 245 (511)
Q Consensus 197 ---------~w~m~~ga~~~-~------------~G~i~ly~S~D-l~~W~~~--~~~l~~~~~------~g~wECPdlf 245 (511)
+++|++.+... . .-...++.|+| +.+|+.. ++|+...+. ..-+.-|.+|
T Consensus 95 ~g~~~~~~~~~~l~YTg~~~~~~~~~~~~~~~~~~q~q~lA~s~D~g~~w~k~~~~~pvi~~~~~~y~~~~~~fRDP~V~ 174 (518)
T 1y4w_A 95 SGFGKDGKTPLVAMYTSYYPVAQTLPSGQTVQEDQQSQSIAYSLDDGLTWTTYDAANPVIPNPPSPYEAEYQNFRDPFVF 174 (518)
T ss_dssp TSCCCSSSCCEEEEEEEEESSCEECTTSCEECTTEEEEEEEEESSTTSSCEECTTTCCSBCSCCTTCGGGTTSEEEEEEE
T ss_pred cccccCCCccEEEEEeeeeccccccccccccccceeEEEEEEEcCCCceEEEcCCCCCeEecCCcccccCCCCcCCCcEe
Confidence 89988866531 1 13566788888 8899986 245554322 2467889999
Q ss_pred EeccCC
Q 010428 246 PVSTYG 251 (511)
Q Consensus 246 ~l~~~g 251 (511)
..+.+|
T Consensus 175 ~~~~~g 180 (518)
T 1y4w_A 175 WHDESQ 180 (518)
T ss_dssp EETTTT
T ss_pred EECCCC
Confidence 875333
|
| >3zxk_A Hiaxhd3; hydrolase, sugar binding protein; HET: XYP EPE; 1.44A {Humicola insolens} PDB: 3zxj_A* 3zxl_A* | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0092 Score=64.67 Aligned_cols=82 Identities=11% Similarity=0.050 Sum_probs=54.6
Q ss_pred CCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCccEEEEEEcCCCCCcEEcccccccCC------------
Q 010428 167 KNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVK------------ 234 (511)
Q Consensus 167 ~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~------------ 234 (511)
.||||.. ++-||.|+. .++.|||+-.+.. ...-+.+|+|+||++|+..+..+....
T Consensus 9 ~NPil~g---------~~~DP~iir--~~~~YY~~~st~~-~~pg~~i~~S~DLvnW~~~g~~l~~~~~~~~~~~~~~~~ 76 (542)
T 3zxk_A 9 TNPVLWE---------DHPALEVFR--VGSVFYYSSSTFA-YSPGAPVLKSYDLVHWTPVTHSVPRLNFGSNYDLPSGTP 76 (542)
T ss_dssp ESCSCCS---------CCCSCEEEE--ETTEEEEECCCBT-EESEEEEEEESSSSSCEEEEEEESSCCSCGGGGCCSSTT
T ss_pred cCCccCC---------CCCCCeEEE--ECCEEEEEEecCc-cCCCeEEEEcCCCCCccccccccccCCccccccccCCcc
Confidence 4899843 268999754 4779998765432 122378999999999999886543210
Q ss_pred --CCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 010428 235 --GTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (511)
Q Consensus 235 --~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~ 273 (511)
..+..-.|++...+.+| ||+|.++.+
T Consensus 77 ~~~~~~~WAP~i~~~~~~G-------------~fYly~~~~ 104 (542)
T 3zxk_A 77 GAYVKGIWASTLRYRRSND-------------RFYWYGCVE 104 (542)
T ss_dssp TTTTCSBCSCEEEEETTTT-------------EEEEEEEET
T ss_pred cccCCceECCcEEEECCCC-------------EEEEEEECC
Confidence 12234579988885334 888877764
|
| >2yfr_A Levansucrase, inulosucrase; fructosyltransferase, glycoside hydrolase family GH68, trans sugar utilization; 1.75A {Lactobacillus johnsonii} PDB: 2yft_A* 2yfs_A* | Back alignment and structure |
|---|
Probab=96.74 E-value=0.019 Score=62.13 Aligned_cols=134 Identities=7% Similarity=0.038 Sum_probs=81.6
Q ss_pred eEE-ECCEEEEEeeeCCCCCC-CCCcEEEEEE-------eCCC---CcceecCCCCCCCC-Cc-------------cCCC
Q 010428 64 VMI-YKGIYHLFYQYNPKGAV-WGNIVWAHST-------SKDL---INWIPHDPAIYPSQ-QS-------------DING 117 (511)
Q Consensus 64 ~~~-~~G~YHLFYQ~~P~~~~-~g~~~WgHa~-------S~DL---vhW~~~~~aL~P~~-~~-------------D~~g 117 (511)
.+. .+|++||||..+-++.. ......+.+. |+|. ..|+...+.+.|+. .| +...
T Consensus 200 Ai~~~DG~l~LFYTG~~~~~~~~~~Q~Ia~a~~~l~~~~s~dgv~~~kw~~~~~l~~~dg~~Yqt~~q~~~~~~~~~~~~ 279 (571)
T 2yfr_A 200 ATLNKDGSIQLYYTKVDTSDNNTNHQKLASATVYLNLEKDQDKISIAHVDNDHIVFEGDGYHYQTYDQWKETNKGADNIA 279 (571)
T ss_dssp EEECTTSCEEEEEEEEECTTTTCCEEEEEEEEEEEEEEGGGTEEEEEEEEEEEEEECCCSSSBCCHHHHHHHCSSCCCCC
T ss_pred eEECcCCEEEEEEeccccCCCCcccceEEEEEeeeeecccCCCcceecccCCCceecCCCcccccccccccccccCCccc
Confidence 344 59999999998654321 1123444432 5674 56766666676764 22 2233
Q ss_pred eEeeeEEEcCCCceEEEEeccCCCC-----------------------------------------cceEEEEEecCCCC
Q 010428 118 CWSGSATILPGEKPAIFYTGIDPHN-----------------------------------------RQVQNLAVPKNLSD 156 (511)
Q Consensus 118 ~~SGsav~~~dg~~~l~YTg~~~~~-----------------------------------------~q~q~lA~s~d~~d 156 (511)
.=.+.++.+++|++||++.+..... ...++|+.|+|..
T Consensus 280 FRDP~Vf~d~dG~~YMVfgA~t~~~~~~G~~~ly~w~~yg~~~~f~~~~~~~v~~~~~~~~~a~~~~G~IgL~~s~dl~- 358 (571)
T 2yfr_A 280 MRDAHVIDDDNGNRYLVFEASTGTENYQGDDQIYQWLNYGGTNKDNLGDFFQILSNSDIKDRAKWSNAAIGIIKLNDDV- 358 (571)
T ss_dssp CEEEEEEECTTCCEEEEEEEEBCTTSCCSGGGGGBGGGTCSCHHHHHHHHHHHHHCHHHHHHHHHCCEEEEEEEECSCT-
T ss_pred CcCCeEEEeCCCCEEEEEEeccCCCCcccchhhccccccccccccchhhhccccccccccccchhccceEEEEEcCCCc-
Confidence 3457776644599999998864321 2456788886632
Q ss_pred cccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeec
Q 010428 157 PYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI 206 (511)
Q Consensus 157 ~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~ 206 (511)
..+..|+-. .|++... . . ...+.-|.+ ++ .+|+|||++..+.
T Consensus 359 ~n~~~We~~--~pL~~~~--~-v-~dm~EcP~l-f~-~dG~yyL~~S~q~ 400 (571)
T 2yfr_A 359 KNPSVAKVY--SPLISAP--M-V-SDEIERPDV-VK-LGNKYYLFAATRL 400 (571)
T ss_dssp TSCCEEEEC--CCSEECT--T-T-BSCCEEEEE-EE-ETTEEEEEEEEEG
T ss_pred CCcccceec--cccccCC--C-c-CceeecCcE-EE-ECCEEEEEEeCCC
Confidence 113689854 5777543 1 1 235778884 55 5899999998763
|
| >3pij_A Beta-fructofuranosidase; five-bladed beta-propeller and beta-sandwich domains, glycos hydrolase family 32, probiotic bacteria, fructose; HET: FRU; 1.80A {Bifidobacterium longum} PDB: 3pig_A* | Back alignment and structure |
|---|
Probab=96.65 E-value=0.01 Score=63.98 Aligned_cols=117 Identities=9% Similarity=0.094 Sum_probs=72.6
Q ss_pred eeEEEcCCCceEEEEeccCCC---CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCe
Q 010428 121 GSATILPGEKPAIFYTGIDPH---NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKR 197 (511)
Q Consensus 121 Gsav~~~dg~~~l~YTg~~~~---~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~ 197 (511)
+..++..+|+|+|||.-+... +...-+.|+|+| |+||+..+ ++|.+. ..++....-.+.++- ..+|+
T Consensus 55 PNG~~y~~G~YHlFYQ~~P~~~~wg~~~WgHa~S~D-----LvhW~~~~--~aL~P~--~~~d~~g~~SGSav~-~~dg~ 124 (526)
T 3pij_A 55 PNGLCFYKGRWHVFYQLHPYGTQWGPMHWGHVSSTD-----MLNWKREP--IMFAPS--LEQEKDGVFSGSAVI-DDNGD 124 (526)
T ss_dssp EEEEEEETTEEEEEEEEETTCSSSCSBEEEEEEESS-----SSSEEECC--CCBCCC--BGGGTTEEEEEEEEE-CTTSC
T ss_pred CeEEEEECCEEEEEEEcCCCCCCcCCcEEEEEEeCC-----CCCceeCe--eccCCC--CccccCCeEeceEEE-ccCCE
Confidence 343344599999999865331 345678999998 48999863 556543 223333444566543 35788
Q ss_pred EEEEEeeec-----CCcc----EEEEEEcCCC--CCcEEcccccccCC---CCCceecCceEEec
Q 010428 198 WRVIIGSKI-----NRKG----LAILYRSKDF--VHWIKAKHPLHSVK---GTGMWECPDFFPVS 248 (511)
Q Consensus 198 w~m~~ga~~-----~~~G----~i~ly~S~Dl--~~W~~~~~~l~~~~---~~g~wECPdlf~l~ 248 (511)
++|++.+.. +..| ...++.|+|+ .+|+..+ |+...+ ...-|.=|.+|+-+
T Consensus 125 ~~l~YTg~~~~~~~~~~~~~~q~q~lA~S~D~gl~~w~K~~-pvi~~P~~~~~~~fRDP~V~~~~ 188 (526)
T 3pij_A 125 LRFYYTGHRWANGHDNTGGDWQVQMTALPDNDELTSATKQG-MIIDCPTDKVDHHYRDPKVWKTG 188 (526)
T ss_dssp EEEEEEEEEETTSSSGGGCEEEEEEEEEESSTTCSCEEEEE-EEECCCGGGEEEEEEEEEEEEET
T ss_pred EEEEEecccCcccccCCCCceeEEEEEEECCCCcceEEECC-ccccCCCCccccccccCEEEEEC
Confidence 988887653 1122 4568889887 8999865 333222 11247778888743
|
| >3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A* | Back alignment and structure |
|---|
Probab=96.04 E-value=0.53 Score=47.96 Aligned_cols=185 Identities=12% Similarity=0.059 Sum_probs=97.4
Q ss_pred cccCCCCCccCCcc----eEE-ECCEEEEEeeeCCCCCCCCCcEEEEEEeCCC-CcceecCCCCCCCCCccCCCeEeeeE
Q 010428 50 HFQPPKNWINDPNG----VMI-YKGIYHLFYQYNPKGAVWGNIVWAHSTSKDL-INWIPHDPAIYPSQQSDINGCWSGSA 123 (511)
Q Consensus 50 Hf~p~~gw~NDPnG----~~~-~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DL-vhW~~~~~aL~P~~~~D~~g~~SGsa 123 (511)
=|+|+.++ +|++. ++. .||+.-++|...... .+..+++-.+|+|. .+|++......+...+ .-|+.+++
T Consensus 11 if~~~~~~-~~~~~~yp~~v~L~dG~lLa~~~~~~~~--~~~~~~~v~rS~DgG~TW~~~~~v~~~~~g~--~~~~~P~l 85 (355)
T 3a72_A 11 IFSPPSDY-IVPRTLYPRNEQLPNGDLLATWENYSPE--PPAVYFPIYRSKDHGKTWNEISRVHDTVNGY--GLRYQPFL 85 (355)
T ss_dssp EECCCTTS-CTTSEEEEEEEECTTSCEEEEEEECCCS--SSCCCEEEEEESSTTSCCEEEEEECCTTTSS--CEEEEEEE
T ss_pred EecCCccc-CCCCCccceEEEcCCCCEEEEEEeecCC--CCCceEEEEEEcCCCcCcCCCcccCCCcCCc--ccccCCcE
Confidence 35666653 45542 222 488888877654332 24456778889996 8999875433222211 12346666
Q ss_pred EEcC-------CCceEEEEeccCCC-CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCC--CCCCCCCEEEEeC
Q 010428 124 TILP-------GEKPAIFYTGIDPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQIN--TSSFRDPTTAWLG 193 (511)
Q Consensus 124 v~~~-------dg~~~l~YTg~~~~-~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~--~~~fRDP~vvw~~ 193 (511)
+..+ +|++.+.+.....+ ....+.+..|+|+| ++|++.. .+..... +... ....-.|+++ .
T Consensus 86 ~~lp~~v~~~~~G~ll~~~~~~~~d~~~~~~~v~~S~D~G----~TW~~~~--~i~~~~~-~~~~~g~~~v~eP~~~-~- 156 (355)
T 3a72_A 86 YSLPERVGSFKKGTLLLAGSSIPTDLSSTDIVLYASQDDG----MTWDFVS--HIAAGGE-ARPNNGLTPVWEPFLL-A- 156 (355)
T ss_dssp EECSSCBTTBCTTCEEEEEEECCTTCCCEEEEEEEESSTT----SCCEEEE--EEEEESC-SSCCTTCCCEEEEEEE-E-
T ss_pred EecCcccccCCCCcEEEEEeeecCCCCCceEEEEEECCCC----ccCccCc--cccccCc-cccccCCCccccceEE-c-
Confidence 6555 77776664433211 23456788999986 8999852 2222110 1000 0011134422 2
Q ss_pred CCCeEEEEEeeec--CCcc-EEEEEEcCCCCCcEEcccccccCCCCCceecCceEEec
Q 010428 194 PDKRWRVIIGSKI--NRKG-LAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVS 248 (511)
Q Consensus 194 ~~g~w~m~~ga~~--~~~G-~i~ly~S~Dl~~W~~~~~~l~~~~~~g~wECPdlf~l~ 248 (511)
.+|..++++..+. ...+ .+.+..|+|+++|...............--.|.+.++.
T Consensus 157 ~~G~l~~~~~~~~~~~~~~~~~~~~~S~DG~TWs~~~~~~~~~~~~~rpg~p~v~~l~ 214 (355)
T 3a72_A 157 NKGKLICYYSDQRDNATYGQTMVHQVTNDLKNWGPVVEDVTYPTYTDRPGMPVVTKLP 214 (355)
T ss_dssp ETTEEEEEEEECCCTTTCSCEEEEEEESSSSSCCCCEEEECCSSTTCEEEEEEEEECT
T ss_pred cCCeEEEEECCCCCCCCCCcEEEEEECCCCCCCCCCeeccccCccCCCCCceEEEECC
Confidence 4677777775442 1223 45566899999996432111111111111237777886
|
| >3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A* | Back alignment and structure |
|---|
Probab=95.93 E-value=0.15 Score=52.01 Aligned_cols=144 Identities=16% Similarity=0.187 Sum_probs=81.1
Q ss_pred EEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEEEeccCC----
Q 010428 65 MIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDP---- 140 (511)
Q Consensus 65 ~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~l~YTg~~~---- 140 (511)
+..+|+..++|.....++.+ ...+.|++|+|+.+|...-....+. .+... .-...++..+||+++|.|.-...
T Consensus 155 ~~~~G~l~~~~~~~~~~~~~-~~~~~~~~S~DG~TWs~~~~~~~~~-~~~~r-pg~p~v~~l~dG~l~l~y~~~~~~~~~ 231 (355)
T 3a72_A 155 LANKGKLICYYSDQRDNATY-GQTMVHQVTNDLKNWGPVVEDVTYP-TYTDR-PGMPVVTKLPNGQYFYVYEYGSFFGTE 231 (355)
T ss_dssp EEETTEEEEEEEECCCTTTC-SCEEEEEEESSSSSCCCCEEEECCS-STTCE-EEEEEEEECTTSCEEEEEEEEBCTTSS
T ss_pred EccCCeEEEEECCCCCCCCC-CcEEEEEECCCCCCCCCCeeccccC-ccCCC-CCceEEEECCCCCEEEEEEECCCcccC
Confidence 44799999999765423333 3468999999999997542211111 11111 11245566789999998876432
Q ss_pred CCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeC---CCCeEEEEEeeecCCccEEEEEEc
Q 010428 141 HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLG---PDKRWRVIIGSKINRKGLAILYRS 217 (511)
Q Consensus 141 ~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~---~~g~w~m~~ga~~~~~G~i~ly~S 217 (511)
.+.....+++|+|+ .+|......++.... + ....--|+++|.. .+|+-+ +.++ .... +|.|
T Consensus 232 ~~~~~~~~~iS~DG-----~tw~~~~~~~~~~~~---~--~~~~g~p~v~~~~~gg~~g~ll-~s~~---~~~~--v~~s 295 (355)
T 3a72_A 232 TYSFPLYYRLSSDP-----ENIASAPGQRLVVSS---G--TQPTSSPYAVWTPYGGENGTII-VSSG---TQGT--LFIN 295 (355)
T ss_dssp SCBCBEEEEEESST-----TCCTTSCCEECCBTT---C--CCCBSSCEEEEESTTSTTCEEE-EECS---SCSS--EEEE
T ss_pred CCceeEEEEECCCc-----ccccCcCCcceecCC---C--cccCCCCeEEECcCCCCCCeEE-EEcC---CCcE--EEEE
Confidence 22345677889874 688765333333222 1 1234678888853 234322 2222 1222 4555
Q ss_pred CC-C-CCcEEcc
Q 010428 218 KD-F-VHWIKAK 227 (511)
Q Consensus 218 ~D-l-~~W~~~~ 227 (511)
.| . .+|+...
T Consensus 296 ~~~g~~~W~~~~ 307 (355)
T 3a72_A 296 KALGEGEWTEIP 307 (355)
T ss_dssp SSTTCSCBEEEC
T ss_pred CCCCCCCCeECC
Confidence 44 4 7898754
|
| >2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A | Back alignment and structure |
|---|
Probab=95.87 E-value=0.12 Score=53.17 Aligned_cols=146 Identities=13% Similarity=0.197 Sum_probs=80.7
Q ss_pred eEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEEEeccCC---
Q 010428 64 VMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDP--- 140 (511)
Q Consensus 64 ~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~l~YTg~~~--- 140 (511)
++..+|+..++|......... ...+.|++|+|+.+|...-. +.+...+... .--..++..+||+++|.|.-...
T Consensus 159 ~~~~~G~l~v~~~d~~~~~~~-~q~l~~~~S~DG~TWs~~~~-~~~~~~~~~r-pg~p~v~~l~dG~l~~~y~~~~~~~~ 235 (367)
T 2ydt_A 159 LMTYKEKLILYYSDQRDNATH-SQKLVHQTTTDLKKWSKVVD-DTKYANYYAR-PGMPTVAKLPNNEYIYVYEYGGGPNP 235 (367)
T ss_dssp EEEETTEEEEEEEECCSTTTC-SSEEEEEEESSSSSCCCCEE-EECCSSTTCE-EEEEEEEECTTSCEEEEEEEETCSCC
T ss_pred EECCCCcEEEEECCCCCCCCC-CcEEEEEECCCCCCCCCcee-ccccCCcCCC-CCcceEEECCCCcEEEEEEecCCCCc
Confidence 345799999999765311222 34688999999999975421 1111111111 11134555679999998875321
Q ss_pred ----CCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeC---CCCeEEEEEeeecCCccEEE
Q 010428 141 ----HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLG---PDKRWRVIIGSKINRKGLAI 213 (511)
Q Consensus 141 ----~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~---~~g~w~m~~ga~~~~~G~i~ 213 (511)
.......+++|+|+ .+|....+.++.. + .+. ..-.-|+++|.. .+|+- ++.+.. .. .
T Consensus 236 ~~~~~~~~~~~~~~S~DG-----~tw~~~~~~~l~~-~--~~~--~~~~sp~v~~~p~~~~~g~l--~~s~~~--~~--~ 299 (367)
T 2ydt_A 236 PAGSDYWFPVYYRLSKDP-----QKFLNKAHHQIVS-N--DGT--TPAGSPYVVWTPYGGKNGTI--VVSCGT--RS--E 299 (367)
T ss_dssp CTTCSCCCBEEEEEESST-----TCCTTSCCEECCC-T--TCC--CCBSSCEEEEESTTSTTCEE--EEECSS--CS--C
T ss_pred ccccccccceEEEEcCCc-----cccCCcCCceeec-C--CCc--ccCcCceEEECcCCCCCCeE--EEEcCC--Cc--e
Confidence 11234667888875 6897654333332 2 111 124688988963 24533 333221 11 2
Q ss_pred EEEcCCC-C--CcEEccc
Q 010428 214 LYRSKDF-V--HWIKAKH 228 (511)
Q Consensus 214 ly~S~Dl-~--~W~~~~~ 228 (511)
+|.|+|+ . .|+....
T Consensus 300 v~~~~~~g~~~~W~~~~~ 317 (367)
T 2ydt_A 300 IFTNQALGDASAWKKWDV 317 (367)
T ss_dssp EEEESSTTCTTCCEEECC
T ss_pred EEEECCCCCCCcceeccC
Confidence 6666554 4 7987643
|
| >2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A | Back alignment and structure |
|---|
Probab=95.81 E-value=0.78 Score=46.98 Aligned_cols=162 Identities=12% Similarity=0.128 Sum_probs=89.7
Q ss_pred cccCCCCCccCCcc----eEE-ECCEEEEEeeeCCCCCCCCCcEEEEEEeCCC-CcceecCCCCCCCCCccCCCeEeeeE
Q 010428 50 HFQPPKNWINDPNG----VMI-YKGIYHLFYQYNPKGAVWGNIVWAHSTSKDL-INWIPHDPAIYPSQQSDINGCWSGSA 123 (511)
Q Consensus 50 Hf~p~~gw~NDPnG----~~~-~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DL-vhW~~~~~aL~P~~~~D~~g~~SGsa 123 (511)
=|+|+.+ .+|+++ ++. .||++-++|...... .+..+++-.+|+|. .+|++...+..+...+ .-|+.+++
T Consensus 16 if~~~~~-~~~~~~~yp~~v~L~dG~LLa~~~~~~~~--~~~~~~~v~rS~DgG~TW~~~~~v~~~~~g~--~~~~~P~l 90 (367)
T 2ydt_A 16 IFDPPTN-YRDPQVLYARPLELSDGTLLGTWENYSPE--PPNVWFPIVKSKDGGKTWKEISKVKDTQNNW--GLRYQPQL 90 (367)
T ss_dssp EECCCTT-SCTTSEEEEEEEECTTSCEEEEEEECCCS--SSCCCEEEEEESSTTSSCEEEEEECCCSSSS--CEEEEEEE
T ss_pred EecCCcc-cCCCCCCceeEEEcCCCCEEEEEEeccCC--CCCeEEEEEEECCCCcCcCcCcccCCCCCCc--ccccCCeE
Confidence 3566665 346642 222 488888876554322 24567788899996 8999865433222222 22456666
Q ss_pred EEcC-------CCceEEEEeccCCC-CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcC--CCCCCCCCEEEEeC
Q 010428 124 TILP-------GEKPAIFYTGIDPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQI--NTSSFRDPTTAWLG 193 (511)
Q Consensus 124 v~~~-------dg~~~l~YTg~~~~-~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~--~~~~fRDP~vvw~~ 193 (511)
...+ +|++++.+.....+ ......+..|+|+| ++|++.. .|..... +.. .....-.|+.+ .
T Consensus 91 ~~lP~~i~~~~~G~lL~~~~s~~~d~~~~~i~v~~S~D~G----~TW~~~~--~i~~g~~-~~~~~g~~~v~eP~~~-~- 161 (367)
T 2ydt_A 91 YELPRAFGKYPKGTVLCSGSSIPSDLSETLIEVYASRDKG----YTWEFVS--HVALGGE-ALPNPGLTPVWEPFLM-T- 161 (367)
T ss_dssp EECSSCBTTBCTTCEEEEEEECCTTCCCEEEEEEEESSSS----SCCEEEE--EEEEESC-SSCCTTCCCEEEEEEE-E-
T ss_pred EEccccccccCCCcEEEEEecccCCCCCCeEEEEEECCCC----CCCcCCe--ecccCCC-cccccCCCccccceEE-C-
Confidence 6544 67776665443221 23456788899986 8999852 3332110 100 00011145422 2
Q ss_pred CCCeEEEEEeeecC--Ccc-EEEEEEcCCCCCcEE
Q 010428 194 PDKRWRVIIGSKIN--RKG-LAILYRSKDFVHWIK 225 (511)
Q Consensus 194 ~~g~w~m~~ga~~~--~~G-~i~ly~S~Dl~~W~~ 225 (511)
.+|..++++....+ ..| .+.+..|+|.++|..
T Consensus 162 ~~G~l~v~~~d~~~~~~~~q~l~~~~S~DG~TWs~ 196 (367)
T 2ydt_A 162 YKEKLILYYSDQRDNATHSQKLVHQTTTDLKKWSK 196 (367)
T ss_dssp ETTEEEEEEEECCSTTTCSSEEEEEEESSSSSCCC
T ss_pred CCCcEEEEECCCCCCCCCCcEEEEEECCCCCCCCC
Confidence 46777766654332 234 456678999999964
|
| >3kf3_A Invertase; GH32, glycoprotein, glycosidase, hydrolase; HET: FRU NAG; 1.90A {Schwanniomyces occidentalis} PDB: 3kf5_A* 3u75_A* 3u14_A* | Back alignment and structure |
|---|
Probab=95.36 E-value=0.13 Score=55.05 Aligned_cols=109 Identities=14% Similarity=0.158 Sum_probs=66.8
Q ss_pred CCceEEEEeccCCC---C-cceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeC----------
Q 010428 128 GEKPAIFYTGIDPH---N-RQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLG---------- 193 (511)
Q Consensus 128 dg~~~l~YTg~~~~---~-~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~---------- 193 (511)
+|+|+|||.-+... + ...-+.|+|+| |+||+..+ ++|.+. . +....-...++-.+
T Consensus 34 ~G~YHlFYQ~nP~~~~wg~~~~WGHa~S~D-----LvhW~~~~--~aL~P~--~--d~~G~~SGSav~d~~~t~g~~~~~ 102 (509)
T 3kf3_A 34 AKLWHLYFQYNPNATAWGQPLYWGHATSND-----LVHWDEHE--IAIGPE--H--DNEGIFSGSIVVDHNNTSGFFNSS 102 (509)
T ss_dssp TTEEEEEEEEETTCSSCCSSBEEEEEEESS-----SSSCEECS--CCBCCS--S--TTCEEEEEEEEECTTCTTSCCCTT
T ss_pred CCEEEEEEecCCCCCCCCCcCEEEEEEccC-----CCCcEECc--cccccc--c--cCCCEEeceEEEeCCccccccccc
Confidence 69999999855322 2 24678999998 49999863 566443 1 11222233333221
Q ss_pred --CCCeEEEEEeeecCCccEEEEEEcCC-CCCcEEcc-cccccCCCCCceecCceEEec
Q 010428 194 --PDKRWRVIIGSKINRKGLAILYRSKD-FVHWIKAK-HPLHSVKGTGMWECPDFFPVS 248 (511)
Q Consensus 194 --~~g~w~m~~ga~~~~~G~i~ly~S~D-l~~W~~~~-~~l~~~~~~g~wECPdlf~l~ 248 (511)
.+++++|++.+.....-...++.|+| +.+|+... +|+... ...-+.-|.+|...
T Consensus 103 ~~p~~~l~~~YTg~~~~~q~q~lA~S~D~g~~~~k~~~nPVi~~-~~~~fRDPkVfw~~ 160 (509)
T 3kf3_A 103 IDPNQRIVAIYTNNIPDNQTQDIAFSLDGGYTFTKYENNPVIDV-SSNQFRDPKVFWHE 160 (509)
T ss_dssp SCGGGCEEEEEEEEETTEEEEEEEEESSSSSSCEECTTCCSBCC-SCSSCEEEEEEEET
T ss_pred cCCCCceEEEECCCCCCCeeEEEEEECCCCcceEEcCCCceEcC-CCCcccCCeEEEEC
Confidence 13578888776543334566788988 78999864 355432 23457778888765
|
| >1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A* | Back alignment and structure |
|---|
Probab=94.79 E-value=0.71 Score=49.82 Aligned_cols=155 Identities=16% Similarity=0.046 Sum_probs=84.1
Q ss_pred eEEE-CCEEEEEeeeCCCCCC-CCCcEEEEEEeCCC-CcceecCCCCCCCC-CccCCCeEeeeEEEcC-CCceEEEEecc
Q 010428 64 VMIY-KGIYHLFYQYNPKGAV-WGNIVWAHSTSKDL-INWIPHDPAIYPSQ-QSDINGCWSGSATILP-GEKPAIFYTGI 138 (511)
Q Consensus 64 ~~~~-~G~YHLFYQ~~P~~~~-~g~~~WgHa~S~DL-vhW~~~~~aL~P~~-~~D~~g~~SGsav~~~-dg~~~l~YTg~ 138 (511)
++.. +|....||...+.... .+.+......|+|. .+|+.... |..+. .-...++..++.++++ +|+++|+|...
T Consensus 26 L~~~~~G~lla~~~~~~~~~~~~~~~~i~~~rS~DgG~TW~~~~~-l~~~~~~~~~~~~~~P~~~~d~~~g~i~l~~~~~ 104 (601)
T 1w8o_A 26 LTVTPDGDLLASYDGRPTGIGAPGPNSILQRRSTDGGRTWGEQQV-VSAGQTTAPIKGFSDPSYLVDRETGTIFNFHVYS 104 (601)
T ss_dssp EEECTTSCEEEEEEECTTSCSTTSCCEEEEEEESSTTSSCCCCEE-EECCBCSSSCBEEEEEEEEECTTTCCEEEEEEEE
T ss_pred EEECCCCCEEEEEcccCCCCCCCCcceEEEEEeCCCCCCCCCCEE-EecCccCCCCCccccceEEEECCCCeEEEEEEee
Confidence 4444 6778888887765432 35667778889986 89987543 32221 1112346667766653 78999998742
Q ss_pred CC-------------C-CcceEEEEEecCCCCcccceeeecCCCceecCC-CCCcCCCCCCCCCEEEEeCC----CCeEE
Q 010428 139 DP-------------H-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPD-AMNQINTSSFRDPTTAWLGP----DKRWR 199 (511)
Q Consensus 139 ~~-------------~-~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p-~~~~~~~~~fRDP~vvw~~~----~g~w~ 199 (511)
.. + ......+..|+|++ ++|.+.. .+... ..+++. ..|..|-....-. .|.++
T Consensus 105 ~~~~~~~~~~g~~~~~~~~~~~~~~~S~D~G----~TWs~~~---~~~~~~~~~~~~-~~~~~~g~gi~~~~~~~~G~l~ 176 (601)
T 1w8o_A 105 QRQGFAGSRPGTDPADPNVLHANVATSTDGG----LTWSHRT---ITADITPDPGWR-SRFAASGEGIQLRYGPHAGRLI 176 (601)
T ss_dssp SSCCTTTCCSCCCTTCTTSCEEEEEEESSTT----SSCEEEE---CGGGSCCSTTCC-EEEECSEECEECCSSTTTTCEE
T ss_pred cCCCccccccCCCccCCceEEEEEEEecCCC----CCCCCcc---cccccccCCCee-EEEecCCeEEEccCCCcCceEE
Confidence 11 0 11245778899875 8999852 22111 001211 1133442111112 36666
Q ss_pred EEEeeecC-CccEEEEEEcCC-CCCcEEcc
Q 010428 200 VIIGSKIN-RKGLAILYRSKD-FVHWIKAK 227 (511)
Q Consensus 200 m~~ga~~~-~~G~i~ly~S~D-l~~W~~~~ 227 (511)
+.+..... ......++.|+| .++|+...
T Consensus 177 ~~~~~~~g~~~~~~~~~~S~D~G~TW~~~~ 206 (601)
T 1w8o_A 177 QQYTIINAAGAFQAVSVYSDDHGRTWRAGE 206 (601)
T ss_dssp EEEEEECTTSCEEEEEEEESSTTSSCEECC
T ss_pred EEEEEcCCCCceeEEEEEECCCCcCccCCC
Confidence 54432211 112455666766 79999754
|
| >4fj6_A Glycoside hydrolase family 33, candidate sialidas; bacterial neuraminidase repeat; HET: MSE GOL; 1.90A {Parabacteroides distasonis} | Back alignment and structure |
|---|
Probab=94.65 E-value=0.16 Score=54.77 Aligned_cols=148 Identities=12% Similarity=0.147 Sum_probs=84.4
Q ss_pred ccCCcceEEE--CCEEEEEeeeCCC-C--CCC-------C---CcEEEEEEeCC-CCcceecCCCCCCCCCcc-CCCeE-
Q 010428 58 INDPNGVMIY--KGIYHLFYQYNPK-G--AVW-------G---NIVWAHSTSKD-LINWIPHDPAIYPSQQSD-INGCW- 119 (511)
Q Consensus 58 ~NDPnG~~~~--~G~YHLFYQ~~P~-~--~~~-------g---~~~WgHa~S~D-LvhW~~~~~aL~P~~~~D-~~g~~- 119 (511)
..|| .+++. +|+-+|||-+... + ..| . .......+|+| ..+|.+. ..|.+...-+ -...+
T Consensus 248 ~~nP-~lvvD~~tG~I~L~~~~~~g~~~~~~w~~~~~g~~~~~t~~~~~~~S~D~G~TWs~p-~~l~~~~~~~~~~~~~~ 325 (523)
T 4fj6_A 248 VGDP-SILVDEKTNTIWVVAAWTHGMGNERAWWNSMPGMTPDETAQLMLVKSEDDGKTWSEP-INITSQVKDPSWYFLLQ 325 (523)
T ss_dssp EEEE-EEEECTTTCCEEEEEEECCSCTTSCGGGTCCSSSSTTTSCEEEEEEESSTTSSCCCC-EECHHHHCCTTCSEEEE
T ss_pred ccCc-eEEEECCCCeEEEEEEecccccccccccccccCCCCCcceEEEEEEcCCCCccCCCC-eeecccccCCcceEEec
Confidence 4578 46663 6999999987532 1 111 1 12455677776 5999863 2232211000 01122
Q ss_pred -eeeEEEcCCCceEEEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeE
Q 010428 120 -SGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRW 198 (511)
Q Consensus 120 -SGsav~~~dg~~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w 198 (511)
.|+.++..+|++++--.+....+...-.+.+|+|.+ .+|+... ++- ....+|.++-. ++|+.
T Consensus 326 g~G~GI~l~dGrLv~P~~~~~~~g~~~s~i~~S~D~G----~TW~~~~--~~~----------~~~~e~~vve~-~dG~L 388 (523)
T 4fj6_A 326 GPGRGITMQDGTLVFPIQFIDATRVPNAGIMYSKDRG----KTWHLHN--LAR----------TNTTEAQVAEV-EPGVL 388 (523)
T ss_dssp CSEECEECTTSCEEEEEEEECTTSCEEEEEEEESSTT----SSCEECC--CSE----------ETEEEEEEEEE-ETTEE
T ss_pred CCCcceEEeCCeEEEEEEEEcCCCCEEEEEEEECCCC----CeEEECC--CCC----------ccccCCEEEEe-cCCEE
Confidence 356677789987652212222233455677898875 8999752 221 12467876533 57888
Q ss_pred EEEEeeecCCccEEEEEEcCC-CCCcEEc
Q 010428 199 RVIIGSKINRKGLAILYRSKD-FVHWIKA 226 (511)
Q Consensus 199 ~m~~ga~~~~~G~i~ly~S~D-l~~W~~~ 226 (511)
+|.+.+.. .|...+|+|.| ..+|+..
T Consensus 389 ~~~~R~~~--~g~r~v~~S~D~G~TWt~~ 415 (523)
T 4fj6_A 389 MLNMRDNR--GGSRAVATTKDLGKTWTEH 415 (523)
T ss_dssp EEEEEETT--CSBCEEEEESSTTSSCEEC
T ss_pred EEEEEecC--CCcEEEEEECCCCCccCcC
Confidence 87665432 24456888876 5899864
|
| >3lig_A Fructosyltransferase; five bladed beta-propeller fold, hydrolase; 1.80A {Aspergillus japonicus} PDB: 3ldk_A* 3lem_A* 3ldr_A 3lih_A* 3lf7_A 3lfi_A* | Back alignment and structure |
|---|
Probab=94.39 E-value=0.11 Score=57.15 Aligned_cols=109 Identities=13% Similarity=0.066 Sum_probs=64.2
Q ss_pred CCCceEEEEeccCCCCcceEEEEEecCCCCcccceeeecCC--CceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEee
Q 010428 127 PGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPK--NPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGS 204 (511)
Q Consensus 127 ~dg~~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~--nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga 204 (511)
.+|.|+|||--+.. + -+.|+|+| |+||+..+. .+.|.+. ..++....-...++-...+|+++|++.+
T Consensus 50 ~~G~YHlFYQ~~P~-g---WgHa~S~D-----LvhW~~~~~~~~~aL~P~--~~~D~~G~~SGSav~~~~~g~~~~~YTg 118 (634)
T 3lig_A 50 STGLFHVGFLHDGD-G---IAGATTAN-----LATYTDTSDNGSFLIQPG--GKNDPVAVFDGAVIPVGVNNTPTLLYTS 118 (634)
T ss_dssp TTCCEEEEEEETTS-C---EEEEEESS-----SSCCEESCSTTCEEECSC--SSSCSSEEEEEEEESSCGGGSCEEEEEE
T ss_pred CCCEEEEEEecCCC-c---eeEEEecC-----cCceeECcCCCCceecCC--CCCCCCCcEeeEEEEECCCCEEEEEEEe
Confidence 58999999985532 2 78999998 489998732 4566544 2232222222222211126788888765
Q ss_pred ecC---------Cc--cEEEEEEcCC-CCCcEEcc-cccccC-CCC---CceecCceEE
Q 010428 205 KIN---------RK--GLAILYRSKD-FVHWIKAK-HPLHSV-KGT---GMWECPDFFP 246 (511)
Q Consensus 205 ~~~---------~~--G~i~ly~S~D-l~~W~~~~-~~l~~~-~~~---g~wECPdlf~ 246 (511)
... .. -...++.|+| +++|+... +|+... +.+ .-|-=|.+|.
T Consensus 119 ~~~~~~~~~~~~~~~~q~Q~lA~S~D~g~~w~K~~~nPVi~~~p~g~~~~~fRDPkV~~ 177 (634)
T 3lig_A 119 VSFLPIHWSIPYTRGSETQSLAVARDGGRRFDKLDQGPVIADHPFAVDVTAFRAPFVFR 177 (634)
T ss_dssp ECSCCCCTTSCCCTTSEEEEEEEEEGGGTEEEECSSSCSBCSSSTTCCEEEEEEEEEEC
T ss_pred cccccccccCcCCCCcEEEEEEEECCCCCEEEECCCCceEcCCCcccCCCccCCCeEcc
Confidence 421 12 2455777876 78999874 455442 222 1366677777
|
| >3vss_A Beta-fructofuranosidase; glycoside hydrolase family 68, beta-propeller, hydrolase; HET: FRU; 1.97A {Arthrobacter} PDB: 3vsr_A* | Back alignment and structure |
|---|
Probab=94.02 E-value=0.37 Score=51.41 Aligned_cols=131 Identities=16% Similarity=0.106 Sum_probs=77.5
Q ss_pred EEECCEEEEEeeeCCC-----CCCCC--CcEEEEEE-----eCCCCccee---cCCCCCCCCCc-c---CCC---eEeee
Q 010428 65 MIYKGIYHLFYQYNPK-----GAVWG--NIVWAHST-----SKDLINWIP---HDPAIYPSQQS-D---ING---CWSGS 122 (511)
Q Consensus 65 ~~~~G~YHLFYQ~~P~-----~~~~g--~~~WgHa~-----S~DLvhW~~---~~~aL~P~~~~-D---~~g---~~SGs 122 (511)
+..||+++|||...-+ +.... ....++|+ |.|.|+++. .++.+.|+..+ + +.. .=.+-
T Consensus 169 ~~~DG~i~LFYT~v~~~~~~~g~~~~~~~Q~ia~A~~~i~~d~dgv~~~~~~~~~~l~~~DG~~Yqt~~q~~~~~fRDP~ 248 (496)
T 3vss_A 169 VSKNGEIKLFFTDVAFYRNSDGTNIKPYDPRIALSVGKVKANKKGVTLTGFNKVTDLLQADGTYYQTGAQNEFFNFRDPF 248 (496)
T ss_dssp ECTTCEEEEEEEEEEECBCTTSCBSSCCEEEEEEEEEEEEEETTEEEEEEEEEEEEEECCCSSSBCCTTTCTTCCCEEEE
T ss_pred ECCCCeEEEEEEEeecccCCCccccccceeEEEEEeeeeeecCCcceEeccCCCcccccCChhhhhccccccccccCCCe
Confidence 3469999999995421 11111 23456654 678776654 45667777532 1 222 22455
Q ss_pred EEEc--CCCceEEEEeccCCC-C---------------------------------cceEEEEEecCCCCcccceeeecC
Q 010428 123 ATIL--PGEKPAIFYTGIDPH-N---------------------------------RQVQNLAVPKNLSDPYLREWVKSP 166 (511)
Q Consensus 123 av~~--~dg~~~l~YTg~~~~-~---------------------------------~q~q~lA~s~d~~d~~l~~w~K~~ 166 (511)
++++ .+|..||++.|+... + .-.++||..++. .+..|+-.
T Consensus 249 vf~DP~~dG~~YLVFEgnT~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~anG~IGLa~~~s~---D~~~We~~- 324 (496)
T 3vss_A 249 TFEDPAHPGETFMVFEGNSAMQRETATCNEADLGYRQGDPYAETVDDVNASGATYQIGNVGLAKAKNK---QLTEWEFL- 324 (496)
T ss_dssp EECCTTSTTCCEEEEEEEBSSCGGGCCCCHHHHCCCTTCTTCCCHHHHHHHTGGGCEEEEEEEEESST---TSCCEEEE-
T ss_pred eEecCCCCCcEEEEEecccCCcCccccccccccccccccccccccccccccccccccceEEEEEccCC---CCCccEEe-
Confidence 6554 368899999875421 0 123556665442 25789865
Q ss_pred CCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeec
Q 010428 167 KNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI 206 (511)
Q Consensus 167 ~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~ 206 (511)
.|++... . + ...+.=|.|| + .+|+||++..++.
T Consensus 325 -~PL~~a~--~-v-~deiErP~vf-~-~dGKyYLFt~s~~ 357 (496)
T 3vss_A 325 -PPILSAN--C-V-TDQTERPQIY-F-KDGKSYLFTISHR 357 (496)
T ss_dssp -EEEEEEE--T-T-BSCCEEEEEE-E-ETTEEEEEEEECS
T ss_pred -CccccCC--C-C-CCceeCCcEE-E-ECCEEEEEEeccc
Confidence 4888543 1 1 2356788854 4 5899999987653
|
| >4fj6_A Glycoside hydrolase family 33, candidate sialidas; bacterial neuraminidase repeat; HET: MSE GOL; 1.90A {Parabacteroides distasonis} | Back alignment and structure |
|---|
Probab=93.04 E-value=0.85 Score=48.96 Aligned_cols=171 Identities=14% Similarity=0.034 Sum_probs=91.4
Q ss_pred eEE-ECCEEEEEeeeCCCCC-CC-CCcEEEEEEeCCC-CcceecCCCCCCCC----CccCCCeEeeeEEEcC-CCceEEE
Q 010428 64 VMI-YKGIYHLFYQYNPKGA-VW-GNIVWAHSTSKDL-INWIPHDPAIYPSQ----QSDINGCWSGSATILP-GEKPAIF 134 (511)
Q Consensus 64 ~~~-~~G~YHLFYQ~~P~~~-~~-g~~~WgHa~S~DL-vhW~~~~~aL~P~~----~~D~~g~~SGsav~~~-dg~~~l~ 134 (511)
+++ -+|+...||-..+.+. .+ +.+......|+|. .+|.....+....+ +-...+++.++.++++ +|++++|
T Consensus 186 L~~~~~G~Lla~~~~r~~~~~D~~~~i~i~~~rS~DgG~tWs~~~~v~~~~~~~~~~~~~~~~~nP~lvvD~~tG~I~L~ 265 (523)
T 4fj6_A 186 LVTTNNGTLLGVYDIRYNSSVDLQEKIDIGVSRSTDKGQTWEPMRVAMTFKQTDGLPHGQNGVGDPSILVDEKTNTIWVV 265 (523)
T ss_dssp EEECTTSCEEEEEEEESSCSCCSSSSEEEEEEEESSTTSSCCCCEEEECCTTGGGCCGGGSCEEEEEEEECTTTCCEEEE
T ss_pred eEECCCCcEEEEEeceeccCCCCcCcEEEEEEEeCCCCCEeCCcEEeecccccccCccccccccCceEEEECCCCeEEEE
Confidence 444 3788888887654333 22 5666778889885 89986533332221 1123678899998875 7999999
Q ss_pred EeccCC----------------CCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCE-EEEeCCCCe
Q 010428 135 YTGIDP----------------HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPT-TAWLGPDKR 197 (511)
Q Consensus 135 YTg~~~----------------~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~-vvw~~~~g~ 197 (511)
|+.... ......++..|+|+| ++|.+.. .+......+.+. .-+.-|- -+-. ++|.
T Consensus 266 ~~~~~g~~~~~~w~~~~~g~~~~~t~~~~~~~S~D~G----~TWs~p~--~l~~~~~~~~~~-~~~~g~G~GI~l-~dGr 337 (523)
T 4fj6_A 266 AAWTHGMGNERAWWNSMPGMTPDETAQLMLVKSEDDG----KTWSEPI--NITSQVKDPSWY-FLLQGPGRGITM-QDGT 337 (523)
T ss_dssp EEECCSCTTSCGGGTCCSSSSTTTSCEEEEEEESSTT----SSCCCCE--ECHHHHCCTTCS-EEEECSEECEEC-TTSC
T ss_pred EEecccccccccccccccCCCCCcceEEEEEEcCCCC----ccCCCCe--eecccccCCcce-EEecCCCcceEE-eCCe
Confidence 864210 012345678898875 8997631 111110001110 0111221 1122 5787
Q ss_pred EEEEEeeec-CCccEEEEEEc-CCCCCcEEcccccccCCCCCceecCceEEec
Q 010428 198 WRVIIGSKI-NRKGLAILYRS-KDFVHWIKAKHPLHSVKGTGMWECPDFFPVS 248 (511)
Q Consensus 198 w~m~~ga~~-~~~G~i~ly~S-~Dl~~W~~~~~~l~~~~~~g~wECPdlf~l~ 248 (511)
+++-+-... ++.....++.| ++..+|+... ... .+ .--|.+.++.
T Consensus 338 Lv~P~~~~~~~g~~~s~i~~S~D~G~TW~~~~-~~~----~~-~~e~~vve~~ 384 (523)
T 4fj6_A 338 LVFPIQFIDATRVPNAGIMYSKDRGKTWHLHN-LAR----TN-TTEAQVAEVE 384 (523)
T ss_dssp EEEEEEEECTTSCEEEEEEEESSTTSSCEECC-CSE----ET-EEEEEEEEEE
T ss_pred EEEEEEEEcCCCCEEEEEEEECCCCCeEEECC-CCC----cc-ccCCEEEEec
Confidence 765444332 22223344445 5579999753 221 12 2336777775
|
| >2xzi_A KDNAse, extracellular sialidase/neuraminidase, putative; hydrolase; HET: KDM; 1.45A {Aspergillus fumigatus} PDB: 2xcy_A* 2xzj_A* 2xzk_A* | Back alignment and structure |
|---|
Probab=91.58 E-value=0.77 Score=47.03 Aligned_cols=137 Identities=15% Similarity=0.136 Sum_probs=77.2
Q ss_pred ccCCcceEEE-CCEEEEEeeeCCCC-----C--------------CC-CCcEEEEEEeCC-CCcceecCCCCCCC---CC
Q 010428 58 INDPNGVMIY-KGIYHLFYQYNPKG-----A--------------VW-GNIVWAHSTSKD-LINWIPHDPAIYPS---QQ 112 (511)
Q Consensus 58 ~NDPnG~~~~-~G~YHLFYQ~~P~~-----~--------------~~-g~~~WgHa~S~D-LvhW~~~~~aL~P~---~~ 112 (511)
..+|. ++.. +|+.+|||.+++.. . .| .........|+| .++|... ..|.+. ..
T Consensus 102 ~~~Pt-~v~~~~g~I~l~~~~~~g~y~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~S~D~G~TWs~p-~~l~~~~~~~~ 179 (386)
T 2xzi_A 102 WGNPT-PVVDDDNTIYLFLSWNGATYSQNGKDVLPDGTVTKKIDSTWEGRRHLYLTESRDDGNTWSKP-VDLTKELTPDG 179 (386)
T ss_dssp EEEEE-EEECTTSCEEEEEEEECTTEESSSCCBCTTSCBCEECCSSTTTSCEEEEEEESSTTSCCCCC-EECHHHHSCTT
T ss_pred ccccE-EEEeCCCCEEEEEEeccccccccCcceeccCceecccccccccccEEEEEEECCCCccCCCc-ccCcccccccc
Confidence 34573 4555 79999999764421 0 01 123455677887 6999853 112111 11
Q ss_pred ccCCCeEeeeEEEcCCCceEEEEeccCCCCcceEEEEEecC--CCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEE
Q 010428 113 SDINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKN--LSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTA 190 (511)
Q Consensus 113 ~D~~g~~SGsav~~~dg~~~l~YTg~~~~~~q~q~lA~s~d--~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vv 190 (511)
+.....-.|+.|...+|++++-.. ..+.+|+| ++ .+|+... ++ . . -.+|.++
T Consensus 180 ~~~~~~~~g~gI~l~dGrLv~p~~---------~~~~~S~D~~~G----~tW~~~~--~~-~-~---------~~e~~vv 233 (386)
T 2xzi_A 180 WAWDAVGPGNGIRLTTGELVIPAM---------GRNIIGRGAPGN----RTWSVQR--LS-G-A---------GAEGTIV 233 (386)
T ss_dssp CCSCCBCSSCCEECTTSCEEEEET---------TEEEEEESSTTS----CEEEEEE--CT-T-C---------CSSEEEE
T ss_pred ceeeccCCccEEEecCCEEEEEeE---------EEEEEccCCCCC----CcccccC--cC-C-C---------CCcCEEE
Confidence 211111124556667888776433 24567888 64 7998642 21 1 1 1467755
Q ss_pred EeCCCCeEEEEEeeecCCccEEEEEEcCCCCCcEEc
Q 010428 191 WLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKA 226 (511)
Q Consensus 191 w~~~~g~w~m~~ga~~~~~G~i~ly~S~Dl~~W~~~ 226 (511)
-. ++|+.+|+.... ..+...+|+|.| .+|+..
T Consensus 234 e~-~dG~L~~~~r~~--~g~~r~v~~S~D-~tWt~~ 265 (386)
T 2xzi_A 234 QT-PDGKLYRNDRPS--QKGYRMVARGTL-EGFGAF 265 (386)
T ss_dssp EC-TTSCEEEEECCS--SSEEEEEEEEET-TEECCC
T ss_pred Ee-CCCcEEEEEeCC--CCccEEEEEEeC-CccCcc
Confidence 33 678887776432 222567999999 999753
|
| >1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A* | Back alignment and structure |
|---|
Probab=91.44 E-value=2.9 Score=44.97 Aligned_cols=146 Identities=18% Similarity=0.164 Sum_probs=79.9
Q ss_pred cCCcceEEE--CCEEEEEeeeCCCCCCC----C-------CcEEEEEEeCC-CCcceecCCCCC---CCCCccCCCeE--
Q 010428 59 NDPNGVMIY--KGIYHLFYQYNPKGAVW----G-------NIVWAHSTSKD-LINWIPHDPAIY---PSQQSDINGCW-- 119 (511)
Q Consensus 59 NDPnG~~~~--~G~YHLFYQ~~P~~~~~----g-------~~~WgHa~S~D-LvhW~~~~~aL~---P~~~~D~~g~~-- 119 (511)
.||. ++.. +|+.+|||.+......+ | ........|+| ..+|+.... +. |...+ ...+
T Consensus 84 ~~P~-~~~d~~~g~i~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~S~D~G~TWs~~~~-~~~~~~~~~~--~~~~~~ 159 (601)
T 1w8o_A 84 SDPS-YLVDRETGTIFNFHVYSQRQGFAGSRPGTDPADPNVLHANVATSTDGGLTWSHRTI-TADITPDPGW--RSRFAA 159 (601)
T ss_dssp EEEE-EEECTTTCCEEEEEEEESSCCTTTCCSCCCTTCTTSCEEEEEEESSTTSSCEEEEC-GGGSCCSTTC--CEEEEC
T ss_pred ccce-EEEECCCCeEEEEEEeecCCCccccccCCCccCCceEEEEEEEecCCCCCCCCccc-ccccccCCCe--eEEEec
Confidence 4563 3443 78999999864321111 1 12446677888 589997542 21 11111 2233
Q ss_pred eeeEEEcCC----CceEEEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCC
Q 010428 120 SGSATILPG----EKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPD 195 (511)
Q Consensus 120 SGsav~~~d----g~~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~ 195 (511)
.|+.+...+ |++++.|............+.+|+|++ .+|++.. ++-. ....|.++ .-.+
T Consensus 160 ~g~gi~~~~~~~~G~l~~~~~~~~g~~~~~~~~~~S~D~G----~TW~~~~--~~~~----------~~~~~~v~-~~~d 222 (601)
T 1w8o_A 160 SGEGIQLRYGPHAGRLIQQYTIINAAGAFQAVSVYSDDHG----RTWRAGE--AVGV----------GMDENKTV-ELSD 222 (601)
T ss_dssp SEECEECCSSTTTTCEEEEEEEECTTSCEEEEEEEESSTT----SSCEECC--CBCS----------SCCSEEEE-ECTT
T ss_pred CCeEEEccCCCcCceEEEEEEEcCCCCceeEEEEEECCCC----cCccCCC--CCCC----------CCCcCEEE-EeCC
Confidence 234454443 777766543221112345678899875 8999852 3211 12355544 3367
Q ss_pred CeEEEEEeeecCCccEEEEEEcCCC-CCcEEc
Q 010428 196 KRWRVIIGSKINRKGLAILYRSKDF-VHWIKA 226 (511)
Q Consensus 196 g~w~m~~ga~~~~~G~i~ly~S~Dl-~~W~~~ 226 (511)
|+.+|+... ....|...+|+|.|. .+|+..
T Consensus 223 G~l~~~~r~-~~~~~~~~~~~S~DgG~tW~~~ 253 (601)
T 1w8o_A 223 GRVLLNSRD-SARSGYRKVAVSTDGGHSYGPV 253 (601)
T ss_dssp SCEEEEECC-TTCCSEEEEEEESSTTSCCCCC
T ss_pred CEEEEEEeC-CCCCCCEEEEEEcCCCCCCCCC
Confidence 887764422 122467789999885 899753
|
| >3sc7_X Inulinase; glycoside hydrolase family 32, glycosylation cytosol, hydrolase; HET: MAN NAG EPE; 1.50A {Aspergillus ficuum} PDB: 3rwk_X* | Back alignment and structure |
|---|
Probab=90.64 E-value=1.4 Score=47.12 Aligned_cols=112 Identities=20% Similarity=0.215 Sum_probs=64.4
Q ss_pred EcCCCceEEEEeccCCC---CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCC------
Q 010428 125 ILPGEKPAIFYTGIDPH---NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPD------ 195 (511)
Q Consensus 125 ~~~dg~~~l~YTg~~~~---~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~------ 195 (511)
+..+|+|+|||.-+... +...-+.|+|+| |+||+..+ +.| ++ ..+. ..-...++-. ++
T Consensus 48 ~y~~G~YHlFYQ~~P~~~~wg~~~WgHa~S~D-----LvhW~~~~--~aL-~d-~~g~---~~~SGSav~~-~~~~~g~~ 114 (516)
T 3sc7_X 48 IKIGSTWHLFFQHNPTANVWGNICWGHATSTD-----LMHWAHKP--TAI-AD-ENGV---EAFTGTAYYD-PNNTSGLG 114 (516)
T ss_dssp EEETTEEEEEEEEETTCSTTCCCEEEEEEESS-----SSSCEEEE--EEE-CC-BTTE---EEEEEEEEEC-TTCTTSSS
T ss_pred EEECCEEEEEEeCCCCCCccCCCEEEEEEeCC-----CCcceecC--ccc-cC-CCCc---eeEeceEEEe-CCcccccc
Confidence 34589999999865321 235668899998 59999863 344 22 0110 0112222222 22
Q ss_pred ----CeEEEEEeeecC--CccEEEEEEcCC-CCCcEEcc-cccccCC------CCC--ceecCceEEecc
Q 010428 196 ----KRWRVIIGSKIN--RKGLAILYRSKD-FVHWIKAK-HPLHSVK------GTG--MWECPDFFPVST 249 (511)
Q Consensus 196 ----g~w~m~~ga~~~--~~G~i~ly~S~D-l~~W~~~~-~~l~~~~------~~g--~wECPdlf~l~~ 249 (511)
+.++|++.+... +.-...++.|+| ..+|+... +|+...+ ..+ -+.=|.+|.-..
T Consensus 115 ~~~~~~l~l~YTg~~~~~~~q~q~lA~s~D~g~~w~k~~~nPVi~~~~~~~~~~~~~~~fRDPkV~~~~~ 184 (516)
T 3sc7_X 115 DSANPPYLAWFTGYTTSSQTQDQRLAFSVDNGATWTKFQGNPIISTSQEAPHDITGGLESRDPKVFFHRQ 184 (516)
T ss_dssp CSSSCCEEEEEEEEETTTTEEEEEEEEESSTTSCCEECTTCCSBCHHHHTTTCTTSSSSCEEEEEEEETT
T ss_pred cCCCCeEEEEEeeeeCCCCceEEEEEEecCCCceEEEcCCCceEcCCCcccccccCCCcccCCeEEEECC
Confidence 248877766532 223456778877 58999864 4554321 111 367788888753
|
| >2bf6_A Sialidase, EXO-alpha-sialidase; sialic acid, hydrolase; HET: SIA; 0.97A {Clostridium perfringens} PDB: 2vk5_A 2vk6_A* 2vk7_A* | Back alignment and structure |
|---|
Probab=90.12 E-value=1.3 Score=46.37 Aligned_cols=126 Identities=12% Similarity=0.166 Sum_probs=66.7
Q ss_pred EEEEEEeCC-CCcceecCCCCCCC--CCccC-CCeEeeeEEEcCC----CceEE-EEeccCCCCcceEEEEEecCCCCcc
Q 010428 88 VWAHSTSKD-LINWIPHDPAIYPS--QQSDI-NGCWSGSATILPG----EKPAI-FYTGIDPHNRQVQNLAVPKNLSDPY 158 (511)
Q Consensus 88 ~WgHa~S~D-LvhW~~~~~aL~P~--~~~D~-~g~~SGsav~~~d----g~~~l-~YTg~~~~~~q~q~lA~s~d~~d~~ 158 (511)
......|+| ..+|.... .|.+. ..+.. .+.-.|+.+...+ |++++ .|.... .+.....+.+|+|.+
T Consensus 188 ~~~~~~S~D~G~TWs~p~-~l~~~~~~~~~~~~~~~~g~Gi~l~~g~~~Grlv~p~~~~~~-~g~~~~~v~~S~D~G--- 262 (449)
T 2bf6_A 188 YINLVYSDDDGKTWSEPQ-NINFQVKKDWMKFLGIAPGRGIQIKNGEHKGRIVVPVYYTNE-KGKQSSAVIYSDDSG--- 262 (449)
T ss_dssp EEEEEEESSTTSSCCCCE-ECHHHHCCTTCSCEEECSEECEECCSSTTTTCEEEEEEEECT-TCCEEEEEEEESSTT---
T ss_pred EEEEEEEcCCCccCCCCc-cCccccccccceeecccCCeEEEeccCCcCCEEEEEEEEEcC-CCCEEEEEEEECCCC---
Confidence 345677877 59998632 12111 11110 0222345455544 67766 443222 233455678998875
Q ss_pred cceeeecCCCceecCC-CCCc-------C--CCCCCCCCEEEEeCCCCeEEEEEeeecCCccEEEEEEcCC-CCCcEE
Q 010428 159 LREWVKSPKNPLMAPD-AMNQ-------I--NTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKD-FVHWIK 225 (511)
Q Consensus 159 l~~w~K~~~nPVi~~p-~~~~-------~--~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~ly~S~D-l~~W~~ 225 (511)
.+|+... ++.... ...+ . ...+..+|.++-. ++|+.+|+.... .|.+.+|+|.| ..+|+.
T Consensus 263 -~tW~~~~--~~~~~~~~~~G~~~~~~~~~~g~~~~~e~~vve~-~dG~l~~~~R~~---~g~~~v~~S~D~G~TWs~ 333 (449)
T 2bf6_A 263 -KNWTIGE--SPNDNRKLENGKIINSKTLSDDAPQLTECQVVEM-PNGQLKLFMRNL---SGYLNIATSFDGGATWDE 333 (449)
T ss_dssp -SSCEECC--CTTTTEECTTSCEECTTTCCCSTTCEEEEEEEEC-TTSCEEEEEEES---SSEEEEEEESSTTSCCCS
T ss_pred -CceeECC--ccCcccccccccccccccccccCCCCCCCEEEEe-cCCEEEEEEEeC---CCCEEEEEECCCCccccC
Confidence 7999753 221100 0000 0 0123456765533 688888876442 46788999977 589974
|
| >2w20_A Sialidase A; secreted, cell WALL, hydrolase, glycosidase, neuraminidase, peptidoglycan-anchor; HET: MES; 1.49A {Streptococcus pneumoniae} PDB: 2vvz_A* 3h71_A 3h72_A* 3h73_A* 2ya8_A* 2ya5_A* 2ya6_A* 2ya7_A* 2ya4_A* | Back alignment and structure |
|---|
Probab=90.02 E-value=1.7 Score=45.75 Aligned_cols=126 Identities=18% Similarity=0.212 Sum_probs=67.3
Q ss_pred EEEEEeCC-CCcceecCCCCCCC--CCccCC-CeEeeeEEEcCC----CceEE-EEeccCC---CCcceEEEEEecCCCC
Q 010428 89 WAHSTSKD-LINWIPHDPAIYPS--QQSDIN-GCWSGSATILPG----EKPAI-FYTGIDP---HNRQVQNLAVPKNLSD 156 (511)
Q Consensus 89 WgHa~S~D-LvhW~~~~~aL~P~--~~~D~~-g~~SGsav~~~d----g~~~l-~YTg~~~---~~~q~q~lA~s~d~~d 156 (511)
.-...|+| .++|... ..|.+. ..+..- +.-.|+.++..+ |++++ +|+.... .+.....+.+|+|.+
T Consensus 216 ~~~~~S~D~G~TWs~p-~~l~~~~~~~~~~f~~~gpg~gI~l~d~~~~GrLv~p~~~~~~~~~~~g~~~~~v~~SdD~G- 293 (471)
T 2w20_A 216 LWMSYSDDDGKTWSAP-QDITPMVKADWMKFLGVGPGTGIVLRNGPHKGRILIPVYTTNNVSHLNGSQSSRIIYSDDHG- 293 (471)
T ss_dssp EEEEEESSTTSSCCCC-EECHHHHCCTTCSCEEECCEECEECCSSTTTTCEEEEEEECCTTTHHHHCCEEEEEEESSTT-
T ss_pred EEEEEECCCcCcCCCC-cccCcccccccccccccCCcceEEecCCCcCCeEEEEEEEeccccCCCCcEEEEEEEECCCC-
Confidence 44567888 6999863 223221 111100 011244555555 78766 4543211 122356678999875
Q ss_pred cccceeeecCCCceecCCCCCc--CC-------CCCCCCCEEEEeCCCCeEEEEEeeecCCccEEEEEEcCC-CCCcEE
Q 010428 157 PYLREWVKSPKNPLMAPDAMNQ--IN-------TSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKD-FVHWIK 225 (511)
Q Consensus 157 ~~l~~w~K~~~nPVi~~p~~~~--~~-------~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~ly~S~D-l~~W~~ 225 (511)
.+|+... ++-......+ .. .....+|.++ .-++|+.+|+... ..|.+.+|+|.| ..+|+.
T Consensus 294 ---~TW~~~~--~v~~~~~~~g~~~~~~~~~~~~~~~~ep~vv-e~~dG~L~~~~R~---~~G~~~v~~S~DgG~TWs~ 363 (471)
T 2w20_A 294 ---KTWHAGE--AVNDNRQVDGQKIHSSTMNNRRAQNTESTVV-QLNNGDVKLFMRG---LTGDLQVATSKDGGVTWEK 363 (471)
T ss_dssp ---SSCEECC--CTTTTEEETTEEECTTTCCCGGGCCCSEEEE-ECTTSCEEEEECC---SSSEEEEEEESSSSSSCCS
T ss_pred ---CCcccCC--ccCcccccCccccccccccccCcCccCCEEE-EcCCCeEEEEEEe---CCCCEEEEEEcCCCcCCCC
Confidence 8999753 2211100000 00 0124688854 3368888877643 246778999977 589974
|
| >2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A* | Back alignment and structure |
|---|
Probab=89.26 E-value=2.5 Score=46.87 Aligned_cols=116 Identities=11% Similarity=0.084 Sum_probs=66.1
Q ss_pred EEEEEeCC-CCcceecCCCCCCCCCccCCCeE--eeeEEEcCC----CceEE-EEeccCCCCcceEEEEEecCCCCcccc
Q 010428 89 WAHSTSKD-LINWIPHDPAIYPSQQSDINGCW--SGSATILPG----EKPAI-FYTGIDPHNRQVQNLAVPKNLSDPYLR 160 (511)
Q Consensus 89 WgHa~S~D-LvhW~~~~~aL~P~~~~D~~g~~--SGsav~~~d----g~~~l-~YTg~~~~~~q~q~lA~s~d~~d~~l~ 160 (511)
+-...|+| ..+|..... |.+...-.....+ .|+.+...+ |++++ .|+... ..-.+.+|+|++ .
T Consensus 428 i~v~~S~DgG~TWs~p~~-l~~~~~~~~~~~~~gpG~gI~l~d~~~~GrLv~p~~~~~~----~~s~i~~SdDgG----~ 498 (679)
T 2sli_A 428 LAMRYSDDEGASWSDLDI-VSSFKPEVSKFLVVGPGIGKQISTGENAGRLLVPLYSKSS----AELGFMYSDDHG----D 498 (679)
T ss_dssp EEEEEESSTTSSCCCCEE-CGGGCCTTCSEEEECSEECEECCSSTTTTCEEEEEEEESS----CSEEEEEESSTT----S
T ss_pred EEEEEeCCCCccCCCCcc-cCcccCccccceecCCCceEEecCCCCCCEEEEEEEecCC----CEEEEEEECCCC----C
Confidence 44567887 599986532 2221000011222 244555555 77766 443321 234677899875 8
Q ss_pred eeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCccEEEEEEcCC-CCCcEEc
Q 010428 161 EWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKD-FVHWIKA 226 (511)
Q Consensus 161 ~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~ly~S~D-l~~W~~~ 226 (511)
+|++.. .+. | .+ ....+|.++ .-++|+.+|+.... .|.+.+|+|.| ..+|+..
T Consensus 499 TW~~~~--~~~--p--~~---~~~~e~~vv-e~~dG~L~~~~R~~---~G~~~v~~S~DgG~TWt~~ 552 (679)
T 2sli_A 499 NWTYVE--ADN--L--TG---GATAEAQIV-EMPDGSLKTYLRTG---SNCIAEVTSIDGGETWSDR 552 (679)
T ss_dssp SCEEEE--CCC--C--CS---CCCCCEEEE-ECTTSCEEEEECCS---SSSCEEEEESSTTSSCCCC
T ss_pred ceEeCc--cCC--C--CC---CCccceEEE-EeCCCEEEEEEEeC---CCCEEEEEEcCCCcCCCCC
Confidence 999853 111 1 11 245788854 33678888876442 35677999988 6899854
|
| >2xzi_A KDNAse, extracellular sialidase/neuraminidase, putative; hydrolase; HET: KDM; 1.45A {Aspergillus fumigatus} PDB: 2xcy_A* 2xzj_A* 2xzk_A* | Back alignment and structure |
|---|
Probab=88.42 E-value=3.8 Score=41.78 Aligned_cols=94 Identities=15% Similarity=0.183 Sum_probs=59.0
Q ss_pred ceEEE-CCEEEEEeeeCCC-CCCCCCcEEEEEEeC---CC----CcceecCCCCCCCCCccCCCeEeeeEEEcCCCceEE
Q 010428 63 GVMIY-KGIYHLFYQYNPK-GAVWGNIVWAHSTSK---DL----INWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAI 133 (511)
Q Consensus 63 G~~~~-~G~YHLFYQ~~P~-~~~~g~~~WgHa~S~---DL----vhW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~l 133 (511)
+++.- +|..-.||-..+. ...++.+.+....|+ |. .+|.... .|.... ...+..++.+++++|+++|
T Consensus 42 sLv~~~~G~l~A~~e~~~~~~~d~g~~~i~~~rS~~~~D~G~~~~tW~~~~-~l~~~~---~~~~~~Pt~v~~~~g~I~l 117 (386)
T 2xzi_A 42 AVVRTTTGRILAFAEGRRHTNQDFGDINLVYKRTKTTANNGASPSDWEPLR-EVVGSG---AGTWGNPTPVVDDDNTIYL 117 (386)
T ss_dssp EEEECTTSCEEEEEEEESSSSCSSSSEEEEEEEBSSSSSTTCSGGGBCCCE-EEECCS---SSEEEEEEEEECTTSCEEE
T ss_pred EEEEeCCCcEEEEEEeeeCCCCCCCceeEEEEEeeeecCCCcCceeccCcE-EEeeCC---CCcccccEEEEeCCCCEEE
Confidence 45555 7777788766554 234567778888898 86 7998542 333221 2345566776654789999
Q ss_pred EEeccC------CC-----------------CcceEEEEEecCCCCcccceeee
Q 010428 134 FYTGID------PH-----------------NRQVQNLAVPKNLSDPYLREWVK 164 (511)
Q Consensus 134 ~YTg~~------~~-----------------~~q~q~lA~s~d~~d~~l~~w~K 164 (511)
+|+... .. ......+..|+|++ ++|.+
T Consensus 118 ~~~~~~g~y~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~S~D~G----~TWs~ 167 (386)
T 2xzi_A 118 FLSWNGATYSQNGKDVLPDGTVTKKIDSTWEGRRHLYLTESRDDG----NTWSK 167 (386)
T ss_dssp EEEEECTTEESSSCCBCTTSCBCEECCSSTTTSCEEEEEEESSTT----SCCCC
T ss_pred EEEeccccccccCcceeccCceecccccccccccEEEEEEECCCC----ccCCC
Confidence 995211 00 11245678888865 89985
|
| >1ms9_A Trans-sialidase; trans-glycosylation, protein-acrbohydrate interac beta-propeller, hydrolase; HET: LAT; 1.58A {Trypanosoma cruzi} SCOP: b.29.1.15 b.68.1.1 PDB: 1ms0_A* 1mr5_A* 1ms1_A 1ms4_A 1ms8_A* 1ms3_A* 2ah2_A* 3b69_A* 3opz_A 3pjq_A* 1s0i_A* 1s0j_A* 1ms5_A 1wcs_A 2ags_A* 2a75_A* 2fhr_A* 1n1t_A* 1n1s_A* 1n1v_A* ... | Back alignment and structure |
|---|
Probab=86.91 E-value=6 Score=43.47 Aligned_cols=149 Identities=13% Similarity=0.171 Sum_probs=80.2
Q ss_pred CccCCcceEEECCEEEEEe-eeCCCCCC----CCCcEEEE------E-EeCC-C-----CcceecCCCCCCC--CCccC-
Q 010428 57 WINDPNGVMIYKGIYHLFY-QYNPKGAV----WGNIVWAH------S-TSKD-L-----INWIPHDPAIYPS--QQSDI- 115 (511)
Q Consensus 57 w~NDPnG~~~~~G~YHLFY-Q~~P~~~~----~g~~~WgH------a-~S~D-L-----vhW~~~~~aL~P~--~~~D~- 115 (511)
-..||. ++..+|+-+||+ .|+..... ++...|+. . .|+| . |+|.+. ..|.+. ..+..
T Consensus 107 ~v~~PT-tVv~gg~I~LL~g~y~~~~~~~~~~~~~~~~~llLVkG~V~~S~D~Gktsk~ItWs~p-~~L~~~~~~~~~~~ 184 (648)
T 1ms9_A 107 RVVDPT-VIVKGNKLYVLVGSYNSSRSYWTSHGDARDWDILLAVGEVTKSTAGGKITASIKWGSP-VSLKEFFPAEMEGM 184 (648)
T ss_dssp EEEEEE-EEEETTEEEEEEEEESSCCSCGGGCSSSTTEEEEEEEEEEEEECGGGSCEEEEEECCC-EECGGGCCSBSSSS
T ss_pred Eeeccc-eeeecccEEEEEEeecCCcccccccccCCCcceEEEEeeeccccccccccceeeccCc-ccCccccccccccc
Confidence 456785 555789888888 44432211 22234554 2 3765 3 479753 222221 11110
Q ss_pred --CCeE--eeeEEEcCCCceEE-EEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEE
Q 010428 116 --NGCW--SGSATILPGEKPAI-FYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTA 190 (511)
Q Consensus 116 --~g~~--SGsav~~~dg~~~l-~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vv 190 (511)
.... .|+.|+..||++++ ++.. ...+...-.+.+|+|.+ .+|+... ++ ++ ....+|.|+
T Consensus 185 ~~~~~~~GgGsGI~m~dGtLVfPv~~~-~~~g~~~s~iiySdD~G----~TW~ls~--~~--~~-------~gc~EpsVv 248 (648)
T 1ms9_A 185 HTNQFLGGAGVAIVASNGNLVYPVQVT-NKKKQVFSKIFYSEDEG----KTWKFGK--GR--SA-------FGCSEPVAL 248 (648)
T ss_dssp BEEEEEECSEECEECTTSCEEEEEEEE-ETTCCEEEEEEEESSTT----SSCEECS--CC--CC-------TTEEEEEEE
T ss_pred eeEEEEecCCceEEecCCcEEEEEEEE-cccccceeeEEEecCCC----CCEEECC--CC--CC-------CCccceEEE
Confidence 1111 36667778999776 2222 22233344567888865 7898753 22 11 236899866
Q ss_pred EeCCCCeEEEEEeeecCCccEEEEEEcCC-CCCcEEccc
Q 010428 191 WLGPDKRWRVIIGSKINRKGLAILYRSKD-FVHWIKAKH 228 (511)
Q Consensus 191 w~~~~g~w~m~~ga~~~~~G~i~ly~S~D-l~~W~~~~~ 228 (511)
-. +|+-+|.... . .|...+|+|.| ...|+....
T Consensus 249 Ew--dG~Lmm~~R~-~--~g~R~Vy~S~D~G~TWte~~~ 282 (648)
T 1ms9_A 249 EW--EGKLIINTRV-D--YRRRLVYESSDMGNTWLEAVG 282 (648)
T ss_dssp EE--TTEEEEEEEE-T--TSCCCEEEESSTTSSCEECTT
T ss_pred EE--CCEEEEEEEc-c--CCcEEEEEecCCCcccccccc
Confidence 33 5775444433 2 24456899987 589986543
|
| >2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A* | Back alignment and structure |
|---|
Probab=84.02 E-value=8.2 Score=42.73 Aligned_cols=114 Identities=17% Similarity=0.213 Sum_probs=61.4
Q ss_pred EEEEeCC-CCcceecCCCCCCCCCccCCCeE--eeeEEE-cCCCceEEEEeccCCCCcceEEEEEecCCCCcccceeeec
Q 010428 90 AHSTSKD-LINWIPHDPAIYPSQQSDINGCW--SGSATI-LPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKS 165 (511)
Q Consensus 90 gHa~S~D-LvhW~~~~~aL~P~~~~D~~g~~--SGsav~-~~dg~~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~ 165 (511)
....|+| ..+|.... .|.+.........+ .|+.++ ..+|++++.+... ....+.+|+|++ .+|++.
T Consensus 449 ~v~rS~DgG~TWs~p~-~l~~~~~~~~~~~~~~pg~GI~~~~~GrLv~p~~~~-----~~s~v~~S~DgG----~TW~~~ 518 (686)
T 2jkb_A 449 AMTTSQNRGESWEQFK-LLPPFLGEKHNGTYLCPGQGLALKSSNRLIFATYTS-----GELTYLISDDSG----QTWKKS 518 (686)
T ss_dssp EEEEESSTTSCCCCCE-ECCCSSCTTSCCCEECSEECEECTTSSCEEEEEEET-----TEEEEEEESSTT----SSCEEE
T ss_pred EEEEECCCCCcCCCCe-ecccccCcccceeeeCCCcceEEccCCeEEEEEecC-----CcEEEEEECCCC----CeeEeC
Confidence 4456777 58998642 23211110001112 123333 3478877644332 234678999976 899985
Q ss_pred CCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCccEEEEEEcCC-CCCcEEc
Q 010428 166 PKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKD-FVHWIKA 226 (511)
Q Consensus 166 ~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~ly~S~D-l~~W~~~ 226 (511)
. .+.+. + ...-.|.++-. .+|.++|++... .|.+.+|+|.| ..+|+..
T Consensus 519 ~--~~~p~----~---~~~~e~~ivel-~dG~L~~~~R~~---~G~~~v~~S~DgG~TWs~~ 567 (686)
T 2jkb_A 519 S--ASIPF----K---NATAEAQMVEL-RDGVIRTFFRTT---TGKIAYMTSRDSGETWSKV 567 (686)
T ss_dssp E--EECSC----S---SCCCCEEEEEE-ETTEEEEEECCS---SSSCEEEEESSTTSSCCCC
T ss_pred c--ccCCC----C---CCceeeEEEEe-cCCEEEEEEEcC---CCcEeEEEeCCCCCCCccc
Confidence 2 22211 1 12335664422 578888765432 24566889977 6899854
|
| >3sil_A Sialidase; glycosidase, hydrolase; HET: PO4 GOL; 1.05A {Salmonella typhimurium} SCOP: b.68.1.1 PDB: 1dim_A* 1dil_A* 2sil_A 2sim_A* | Back alignment and structure |
|---|
Probab=83.65 E-value=5.3 Score=40.95 Aligned_cols=144 Identities=13% Similarity=0.135 Sum_probs=79.0
Q ss_pred ccCCcceEEE-CC--EEEEEee-eCCCCCCC---------CCcEEEEEEeCC-CCcceecCCCCCCC-----CCccCCCe
Q 010428 58 INDPNGVMIY-KG--IYHLFYQ-YNPKGAVW---------GNIVWAHSTSKD-LINWIPHDPAIYPS-----QQSDINGC 118 (511)
Q Consensus 58 ~NDPnG~~~~-~G--~YHLFYQ-~~P~~~~~---------g~~~WgHa~S~D-LvhW~~~~~aL~P~-----~~~D~~g~ 118 (511)
..||.-++-. .| +.+||+. |+-....| .....-..+|+| .++|.+.. .+.+. ..+ .+.
T Consensus 95 v~~Pt~vv~~~tG~~~I~llvg~~~~~~~~~~~~~~~~~~~~~~l~lv~S~D~G~tWs~~~-~~~~~~~~~~~~~--~~~ 171 (379)
T 3sil_A 95 VMDPTCIVANIQGRETILVMVGKWNNNDKTWGAYRDKAPDTDWDLVLYKSTDDGVTFSKVE-TNIHDIVTKNGTI--SAM 171 (379)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEESSCCSCGGGCCSSSSCTTCEEEEEEESSTTSCCEEEC-CSHHHHHHHHCSE--EEE
T ss_pred EecCceEEeCCCCCeeEEEEEEeecCCCcceeeccccCCCCceeEEEEEccCCCCcCCCCc-cccccccccccee--eee
Confidence 5678644433 46 8777754 32211111 122344577776 59998843 11111 111 111
Q ss_pred E--eeeEEEcCCCceEE-EEeccCC--CCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeC
Q 010428 119 W--SGSATILPGEKPAI-FYTGIDP--HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLG 193 (511)
Q Consensus 119 ~--SGsav~~~dg~~~l-~YTg~~~--~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~ 193 (511)
+ .|+.|+..+|++++ .|..... .+...-.+.+|+| + .+|+... ++ .. ....+|.|+-.
T Consensus 172 ~~g~G~GI~l~~G~Lv~P~~~~~~~~~~~~~~s~~iyS~D-G----~tW~~~~--~~-~~--------~~~~ep~vvE~- 234 (379)
T 3sil_A 172 LGGVGSGLQLNDGKLVFPVQMVRTKNITTVLNTSFIYSTD-G----ITWSLPS--GY-CE--------GFGSENNIIEF- 234 (379)
T ss_dssp EECSEECEECTTSCEEEEEEEEECTTSSCSEEEEEEEESS-S----SSEECCS--CC-EE--------CTTCCEEEEEE-
T ss_pred cCCCCceEEEcCCcEEEEEEEeeccCCCCCEEEEEEEcCC-C----CCeEECC--CC-CC--------ccCCCCEEEEE-
Confidence 1 36677788998766 2222111 2233445668888 5 7998642 22 11 23579997643
Q ss_pred CCCeEEEEEeeecCCccEEEEEEcCC-CCCcEEc
Q 010428 194 PDKRWRVIIGSKINRKGLAILYRSKD-FVHWIKA 226 (511)
Q Consensus 194 ~~g~w~m~~ga~~~~~G~i~ly~S~D-l~~W~~~ 226 (511)
+|+.+|.... .|...+|+|.| ..+|+..
T Consensus 235 -dG~L~m~~R~----~g~r~v~~S~D~G~tWt~~ 263 (379)
T 3sil_A 235 -NASLVNNIRN----SGLRRSFETKDFGKTWTEF 263 (379)
T ss_dssp -TTEEEEEECC----SSBCBCEEESSSSSCCEEC
T ss_pred -CCEEEEEEEe----CCCEEEEEEcCCCccCCCC
Confidence 6888877765 34446788866 5899864
|
| >2bf6_A Sialidase, EXO-alpha-sialidase; sialic acid, hydrolase; HET: SIA; 0.97A {Clostridium perfringens} PDB: 2vk5_A 2vk6_A* 2vk7_A* | Back alignment and structure |
|---|
Probab=83.04 E-value=14 Score=38.21 Aligned_cols=68 Identities=13% Similarity=0.012 Sum_probs=42.9
Q ss_pred ECCEEEEEeeeCCCCC---CCCCcEEEEEEeCCC-CcceecCCCCCCCCCccCCCeEeeeEEEcC-CCceEEEEec
Q 010428 67 YKGIYHLFYQYNPKGA---VWGNIVWAHSTSKDL-INWIPHDPAIYPSQQSDINGCWSGSATILP-GEKPAIFYTG 137 (511)
Q Consensus 67 ~~G~YHLFYQ~~P~~~---~~g~~~WgHa~S~DL-vhW~~~~~aL~P~~~~D~~g~~SGsav~~~-dg~~~l~YTg 137 (511)
-+|+...||...+.+. ..+.+......|+|. .+|.....+. ... +..+.+..+.+++. .|+++|+|+.
T Consensus 32 ~~G~lla~~~~r~~~~~d~~~~~~~i~~~rS~DgG~TWs~~~~v~-~~~--~~~~~~dp~l~~d~~~G~i~l~~~~ 104 (449)
T 2bf6_A 32 KEGTLIASIDARRHGGADAPNNDIDTAVRRSEDGGKTWDEGQIIM-DYP--DKSSVIDTTLIQDDETGRIFLLVTH 104 (449)
T ss_dssp TTSCEEEEEEEETTSSCCTTSSCEEEEEEEESSTTSSCCCCEEEE-CCS--TTCEEEEEEEEECTTTCCEEEEEEE
T ss_pred CCCCEEEEEeCccCccccCCCCcceEEEEEcCCCCCCCCCCEEee-cCC--CccccccceeEEECCCCeEEEEEec
Confidence 3777788887655432 123467888999996 7998754322 221 11345666666654 6899999873
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 511 | ||||
| d1y4wa2 | 353 | b.67.2.3 (A:20-372) Exo-inulinase {Aspergillus awa | 1e-98 | |
| d1uypa2 | 294 | b.67.2.3 (A:1-294) Beta-fructosidase (invertase), | 1e-80 | |
| d1oyga_ | 440 | b.67.2.2 (A:) Levansucrase {Bacillus subtilis [Tax | 4e-33 | |
| d1vkda_ | 327 | b.67.2.4 (A:) Hypothetical protein TM1225 {Thermot | 3e-04 |
| >d1y4wa2 b.67.2.3 (A:20-372) Exo-inulinase {Aspergillus awamori [TaxId: 105351]} Length = 353 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Exo-inulinase species: Aspergillus awamori [TaxId: 105351]
Score = 299 bits (766), Expect = 1e-98
Identities = 97/363 (26%), Positives = 138/363 (38%), Gaps = 49/363 (13%)
Query: 42 NQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWI 101
+QPYR YHF P KNW+NDPNG++ + G YHLF+QYNP G WGNI W H+ S+DL +W
Sbjct: 4 DQPYRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDLTHWE 63
Query: 102 PHDPAIYPSQQSDI--NGCWSGSATILPGEKPAI----------FYTGIDP--------- 140
A+ +SGSA YT P
Sbjct: 64 EKPVALLARGFGSDVTEMYFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQ 123
Query: 141 ---HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMA-PDAMNQINTSSFRDPTTAWLGPDK 196
++Q Q++A D L NP++ P + + +FRDP W +
Sbjct: 124 TVQEDQQSQSIAYSL---DDGLTWTTYDAANPVIPNPPSPYEAEYQNFRDPFVFWHDESQ 180
Query: 197 RWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLD 256
+W V+ I +Y S + W G+WECP +
Sbjct: 181 KWVVVTS--IAELHKLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPLDS----- 233
Query: 257 TSDMGPNTKHVLKVSLDD-------TKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDY 309
G +TK V+ L+ Y VG + D + + D+
Sbjct: 234 ----GNSTKWVITSGLNPGGPPGTVGSGTQYFVGEFDGTTFTPDADTVYPGNSTANWMDW 289
Query: 310 GK-YYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSGK--HLV 366
G +YA+ + + N V GW+N + W AIPR + L G LV
Sbjct: 290 GPDFYAAAGYNGLSLNDHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLV 349
Query: 367 QWP 369
Q P
Sbjct: 350 QQP 352
|
| >d1uypa2 b.67.2.3 (A:1-294) Beta-fructosidase (invertase), N-terminal domain {Thermotoga maritima [TaxId: 2336]} Length = 294 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Beta-fructosidase (invertase), N-terminal domain species: Thermotoga maritima [TaxId: 2336]
Score = 251 bits (641), Expect = 1e-80
Identities = 94/329 (28%), Positives = 153/329 (46%), Gaps = 40/329 (12%)
Query: 45 YRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHD 104
++ YHF P W+NDPNG++ +KG YH+FYQYNP+ WGNI W H+ S DL++W
Sbjct: 2 FKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLP 61
Query: 105 PAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVK 164
A+Y + +G +SGSA G K + YT + ++VK
Sbjct: 62 VALY--PDDETHGVFSGSAVEKDG-KMFLVYTYYRDPTHNKGEKETQCVVMSENGLDFVK 118
Query: 165 SPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRK-GLAILYRSKDFVHW 223
NP+++ + T +FRDP + WR+++GS + K G +LY S D HW
Sbjct: 119 YDGNPVISKPP--EEGTHAFRDPKVNR--SNGEWRMVLGSGKDEKIGRVLLYTSDDLFHW 174
Query: 224 IKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVG 283
K + + + T ECPD + K +L S+ T +++G
Sbjct: 175 -KYEGAIFEDETTKEIECPDLVRI---------------GEKDILIYSITSTNSVLFSMG 218
Query: 284 TYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNE--SSSVND 340
EG + + D+G +YA++TFF +R V+ GW+ + +
Sbjct: 219 EL---------KEGKLNVEKRGLLDHGTDFYAAQTFFG--TDRVVVIGWLQSWLRTGLYP 267
Query: 341 DVKKGWAGIQAIPRKLWLDKSGKHLVQWP 369
++GW G+ ++PR+L+++ L P
Sbjct: 268 TKREGWNGVMSLPRELYVE--NNELKVKP 294
|
| >d1oyga_ b.67.2.2 (A:) Levansucrase {Bacillus subtilis [TaxId: 1423]} Length = 440 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Levansucrase domain: Levansucrase species: Bacillus subtilis [TaxId: 1423]
Score = 128 bits (323), Expect = 4e-33
Identities = 48/382 (12%), Positives = 96/382 (25%), Gaps = 88/382 (23%)
Query: 58 INDPNGVMI-YKGIYHLFYQYNPKGAVWGN---IVWAHSTSKDLINWIPHDPAIYPSQQS 113
+ + +G + Y G + +F + + + +W S +
Sbjct: 57 LQNADGTVANYHGYHIVFALAGDPKNADDTSIYMFYQKVGETSIDSWKNAGRVFKDSDKF 116
Query: 114 DINGC--------WSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNL--SDPYLREWV 163
D N WSGSAT K +FYT + Q L + +
Sbjct: 117 DANDSILKDQTQEWSGSATFTSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSSLNIN 176
Query: 164 KSPKNP---------------LMAPDAMNQINTSSFRDP------TTAWLGPDKRWRVII 202
+ + + + RDP +L +
Sbjct: 177 GVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLRDPHYVEDKGHKYLVFEANTGTED 236
Query: 203 GSKINRK-----------------------------------GLAILYRSKDFVHWIKAK 227
G + L ++ + D+ K
Sbjct: 237 GYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDDYTLKKVMK 296
Query: 228 HPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVGTY-- 285
+ S T E + F ++ G L T K+++D + Y
Sbjct: 297 PLIASNTVTDEIERANVFKMN--GKWYLFTD------SRGSKMTIDGITSNDIYMLGYVS 348
Query: 286 STAKDRYVPDEGS-VESDSGLRFDYGKY-YASKTFFDGAKNRRVLWGWVNESSSVNDDVK 343
++ Y P + + L + + Y+ N V+ ++ D +
Sbjct: 349 NSLTGPYKPLNKTGLVLKMDLDPNDVTFTYSHFAVPQAKGNNVVITSYMTNRGFYA-DKQ 407
Query: 344 KGWA-----GIQAIPRKLWLDK 360
+A I+ + D
Sbjct: 408 STFAPSFLLNIKGKKTSVVKDS 429
|
| >d1vkda_ b.67.2.4 (A:) Hypothetical protein TM1225 {Thermotoga maritima [TaxId: 2336]} Length = 327 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: TM1225-like predicted glycosylases domain: Hypothetical protein TM1225 species: Thermotoga maritima [TaxId: 2336]
Score = 40.8 bits (95), Expect = 3e-04
Identities = 25/193 (12%), Positives = 49/193 (25%), Gaps = 28/193 (14%)
Query: 53 PPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINW-IPHDPAIYPSQ 111
P + + V+ Y G + ++ SKD INW I + +
Sbjct: 40 PKGARVFNS-AVVPYNGEFVGVFR---IDHKNTRPFLHFGRSKDGINWEIEPEEIQWVDV 95
Query: 112 QSDI---NGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLRE--WVKSP 166
+ + + + F T + + + K+ +V
Sbjct: 96 NGEPFQPSYAYDPRVVKIEDTYYITFCTD---DHGPTIGVGMTKDFKTFVRLPNAYVPFN 152
Query: 167 KNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKA 226
+N ++ P +N R + L S D +HW
Sbjct: 153 RNGVLFPRKINGKYVMLNRPSDNGHTPFGDIF---------------LSESPDMIHWGNH 197
Query: 227 KHPLHSVKGTGMW 239
+ L
Sbjct: 198 RFVLGRSSYNWWE 210
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 511 | |||
| d1uypa2 | 294 | Beta-fructosidase (invertase), N-terminal domain { | 100.0 | |
| d1y4wa2 | 353 | Exo-inulinase {Aspergillus awamori [TaxId: 105351] | 100.0 | |
| d1oyga_ | 440 | Levansucrase {Bacillus subtilis [TaxId: 1423]} | 99.94 | |
| d1vkda_ | 327 | Hypothetical protein TM1225 {Thermotoga maritima [ | 99.73 | |
| d1uv4a1 | 291 | Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 14 | 99.66 | |
| d1gyha_ | 318 | alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: | 99.53 | |
| d1wl7a1 | 312 | Arabinanase-TS {Bacillus thermodenitrificans [TaxI | 99.49 | |
| d1y7ba2 | 321 | Beta-D-xylosidase N-terminal domain {Clostridium a | 99.37 | |
| d1yrza2 | 317 | Beta-D-xylosidase N-terminal domain {Bacillus halo | 99.35 | |
| d2exha2 | 322 | Beta-D-xylosidase N-terminal domain {Geobacillus s | 99.28 | |
| d1vkda_ | 327 | Hypothetical protein TM1225 {Thermotoga maritima [ | 99.23 | |
| d1uv4a1 | 291 | Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 14 | 98.09 | |
| d1uypa2 | 294 | Beta-fructosidase (invertase), N-terminal domain { | 97.82 | |
| d1yrza2 | 317 | Beta-D-xylosidase N-terminal domain {Bacillus halo | 97.8 | |
| d2b4wa1 | 310 | Hypothetical protein LmjF10.1260 {Leishmania major | 97.66 | |
| d1y7ba2 | 321 | Beta-D-xylosidase N-terminal domain {Clostridium a | 97.65 | |
| d1gyha_ | 318 | alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: | 97.59 | |
| d2exha2 | 322 | Beta-D-xylosidase N-terminal domain {Geobacillus s | 97.47 | |
| d1wl7a1 | 312 | Arabinanase-TS {Bacillus thermodenitrificans [TaxI | 97.33 | |
| d1oyga_ | 440 | Levansucrase {Bacillus subtilis [TaxId: 1423]} | 95.85 | |
| d1y4wa1 | 164 | Exo-inulinase {Aspergillus awamori [TaxId: 105351] | 94.58 | |
| d1w8oa3 | 356 | Micromonospora sialidase, N-terminal domain {Micro | 90.22 | |
| d2b4wa1 | 310 | Hypothetical protein LmjF10.1260 {Leishmania major | 87.41 | |
| d1uypa1 | 138 | Beta-fructosidase (invertase), C-terminal domain { | 86.05 |
| >d1uypa2 b.67.2.3 (A:1-294) Beta-fructosidase (invertase), N-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Beta-fructosidase (invertase), N-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=4.2e-79 Score=616.74 Aligned_cols=284 Identities=32% Similarity=0.694 Sum_probs=251.1
Q ss_pred CCccccccCCCCCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCccCCCeEeeeEE
Q 010428 45 YRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSAT 124 (511)
Q Consensus 45 ~Rp~yHf~p~~gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D~~g~~SGsav 124 (511)
|||+|||+|+.||||||||++|++|+||||||+||+++.||+|+||||+|+|||||+++++||.|+. |..|||||||+
T Consensus 2 ~Rp~~H~~p~~gw~NDPnG~~~~~G~yHlfyQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~~~al~p~~--d~~g~~sGsav 79 (294)
T d1uypa2 2 FKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPVALYPDD--ETHGVFSGSAV 79 (294)
T ss_dssp CSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEETTSSSSCSCEEEEEEESSSSSCEEEEEEECCSS--TTEEEEEEEEE
T ss_pred CCccCcccCCCCCcCCCccceEECCEEEEEEecCCCCCCCCCcEEEEEEeCCcCCeEECCccccccc--CCCCeEEEEEE
Confidence 8999999999999999999999999999999999999999999999999999999999999999986 67899999998
Q ss_pred EcCCCceEEEEeccCC-----CCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEE
Q 010428 125 ILPGEKPAIFYTGIDP-----HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWR 199 (511)
Q Consensus 125 ~~~dg~~~l~YTg~~~-----~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~ 199 (511)
+ .+|++++|||+... ...+.|++|+|+|+ ++|+|++.||||..+ +.....+||||+| |+ ++|+|+
T Consensus 80 ~-~~g~~~~~yT~~~~~~~~~~~~~~~~~a~s~dg-----~~w~k~~~npvi~~~--~~~~~~~fRDP~V-~~-~~g~w~ 149 (294)
T d1uypa2 80 E-KDGKMFLVYTYYRDPTHNKGEKETQCVVMSENG-----LDFVKYDGNPVISKP--PEEGTHAFRDPKV-NR-SNGEWR 149 (294)
T ss_dssp E-ETTEEEEEEEEEECCCSSCCCEEEEEEEEESSS-----SCCEECTTCCSBCSC--SSTTEEEEEEEEE-EE-ETTEEE
T ss_pred e-cCCeEEEEEEEeeCCCCCCcceeeeEEEECCCC-----CceEeecCCceecCC--CccCccccCCCcc-cc-cCCEEE
Confidence 7 59999999998643 24577889998774 899999999999766 4445678999996 65 589999
Q ss_pred EEEeeec-CCccEEEEEEcCCCCCcEEcccccccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCCCcee
Q 010428 200 VIIGSKI-NRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHE 278 (511)
Q Consensus 200 m~~ga~~-~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~~~~~ 278 (511)
|++|++. ++.|+|++|+|+||++|++.+ ++...+..+||||||||+|+ + ||||++|....+.+
T Consensus 150 M~~g~~~~~~~G~i~ly~S~Dl~~W~~~g-~l~~~~~~~~~ECPdlf~l~--~-------------~~vl~~s~~~~~~~ 213 (294)
T d1uypa2 150 MVLGSGKDEKIGRVLLYTSDDLFHWKYEG-AIFEDETTKEIECPDLVRIG--E-------------KDILIYSITSTNSV 213 (294)
T ss_dssp EEEEEEETTTEEEEEEEEESSSSSEEEEE-EEEEETTCSCEEEEEEEEET--T-------------EEEEEEEETTTTEE
T ss_pred EEEEeeecCCccEEEEEEcCCccceeEec-cceeCCCCCceeeceEEEeC--C-------------eeEEEEEecCCCCe
Confidence 9999876 567999999999999999986 45555567899999999997 5 99999999888899
Q ss_pred EEEEEEEeCCCCeeecCCCCcCCCCccccccCC-CccceeeecCCCCcEEEEEeccCCCCC--CCCCCCCCccccccceE
Q 010428 279 YYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSV--NDDVKKGWAGIQAIPRK 355 (511)
Q Consensus 279 ~Y~iG~~d~~~~~F~p~~~~~d~~~~~~lD~G~-fYA~qtf~d~~~grril~gW~~~~~~~--~~~~~~gW~g~lslPRe 355 (511)
.|++|+++. ++|.++. ..++|+|+ |||+|||.+ ++|||+||||++++.. .++.+.||+|+||||||
T Consensus 214 ~y~~G~~~~--~~f~~~~-------~~~lD~G~dfYA~qtf~~--~~R~i~~gW~~~~~~~~~~p~~~~gw~g~lslPRe 282 (294)
T d1uypa2 214 LFSMGELKE--GKLNVEK-------RGLLDHGTDFYAAQTFFG--TDRVVVIGWLQSWLRTGLYPTKREGWNGVMSLPRE 282 (294)
T ss_dssp EEEEEEEET--TEEEEEE-------EEESCCSSSCEEEEECBS--CSSEEEEEESSCTTTGGGCCGGGGTEECCBCCCEE
T ss_pred eeEeeeecC--CeEEeec-------ceEEccCCceeeccCccC--CCCEEEEEECCCCcccccCCCccCCcccceeeCEE
Confidence 999999996 5888765 56899999 999999987 4899999999998653 34567899999999999
Q ss_pred EEEecCCCeEEecc
Q 010428 356 LWLDKSGKHLVQWP 369 (511)
Q Consensus 356 L~l~~~g~~L~q~P 369 (511)
|+|+ +| +|+|+|
T Consensus 283 l~l~-~~-~L~q~P 294 (294)
T d1uypa2 283 LYVE-NN-ELKVKP 294 (294)
T ss_dssp EEEE-TT-EEEEEE
T ss_pred EEEE-CC-EEEecC
Confidence 9996 56 699998
|
| >d1y4wa2 b.67.2.3 (A:20-372) Exo-inulinase {Aspergillus awamori [TaxId: 105351]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Exo-inulinase species: Aspergillus awamori [TaxId: 105351]
Probab=100.00 E-value=3.5e-78 Score=624.70 Aligned_cols=312 Identities=31% Similarity=0.576 Sum_probs=252.2
Q ss_pred CCCCCCccccccCCCCCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCC-cc-CCCe
Q 010428 41 PNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQ-SD-INGC 118 (511)
Q Consensus 41 ~~~~~Rp~yHf~p~~gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~-~D-~~g~ 118 (511)
.+++|||+|||+|+.||||||||++|++|+|||||||||+++.||+|+||||+|+|||||+++|+||.|+.. .| ..||
T Consensus 3 y~~p~Rp~~H~~p~~gwlNDPnGl~y~~G~yHlFyQ~nP~~~~~g~~~WgHa~S~DLv~W~~~p~al~p~~~~~d~~~~~ 82 (353)
T d1y4wa2 3 YDQPYRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDLTHWEEKPVALLARGFGSDVTEMY 82 (353)
T ss_dssp CCCTTCCSSSCCCSSEEEEEEEEEEEETTEEEEEEEECTTCSSSCSCEEEEEEESSSSSCEEEEEEECCBTTTSCCCBEE
T ss_pred CCCCCcCcEeecCCCCCcCCCccceEECCEEEEEEecCCCCCCCCCeEEEEEEeccccceeECCccccCCccCcCCCCcc
Confidence 478999999999999999999999999999999999999999999999999999999999999999999853 33 4679
Q ss_pred EeeeEEEcCCC----------ceEEEEeccCC------------CCcceEEEEEecCCCCcccceeeec-CCCceecCCC
Q 010428 119 WSGSATILPGE----------KPAIFYTGIDP------------HNRQVQNLAVPKNLSDPYLREWVKS-PKNPLMAPDA 175 (511)
Q Consensus 119 ~SGsav~~~dg----------~~~l~YTg~~~------------~~~q~q~lA~s~d~~d~~l~~w~K~-~~nPVi~~p~ 175 (511)
|||||+++.++ .++++|||+.. ...|.|++|+|.|.+ ++|+|. +.||||..+.
T Consensus 83 ~SGsav~~~~~~~~~~~~g~~~l~~~YT~~~~~~~~~~~~~~~~~~~~~q~~A~s~d~g----~~~~~~~~~npvi~~~~ 158 (353)
T d1y4wa2 83 FSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQTVQEDQQSQSIAYSLDDG----LTWTTYDAANPVIPNPP 158 (353)
T ss_dssp EEEEEEECTTCTTSCCCSSSCCEEEEEEEEESSCEECTTSCEECTTEEEEEEEEESSTT----SSCEECTTTCCSBCSCC
T ss_pred ccCceEecCCCccccccCCCceEEEEEeeeecccccccCcccccCCcEEEEEEEECCCC----cceEEecCCCeEecCCC
Confidence 99999986443 46789999732 235789999998853 677775 5899996541
Q ss_pred -CCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCccEEEEEEcCCCCCcEEcccccccCCCCCceecCceEEeccCCCCC
Q 010428 176 -MNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNG 254 (511)
Q Consensus 176 -~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~g~wECPdlf~l~~~g~~g 254 (511)
.......+||||+|+|. +++.|+|++++ ..+.|+|+||+|+||++|++.+.+......++||||||||+|..++
T Consensus 159 ~~~~~~~~~fRDP~V~~~-~~~~~~~~~~~-~~~~g~v~ly~S~Dl~~W~~~g~l~~~~~~g~~wECPdlf~l~~~~--- 233 (353)
T d1y4wa2 159 SPYEAEYQNFRDPFVFWH-DESQKWVVVTS-IAELHKLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPLDS--- 233 (353)
T ss_dssp TTCGGGTTSEEEEEEEEE-TTTTEEEEEEE-EGGGTEEEEEEESSSSSCEEEEEECCCSCCSSEEEEEEEEEEEBTT---
T ss_pred CCCcccccccCCCceEEE-CCCCEEEEEEe-ecCCCeEEEEecCCCCceEEeccccccCCCCcceeeeEEEEeecCC---
Confidence 11234579999998776 44444444444 3456899999999999999998655444567899999999997543
Q ss_pred ccccCCCCCceeEEEEeeCC-------CceeEEEEEEEeCCCCeeecCCCC--cCCCCccccccCC-CccceeeecCCCC
Q 010428 255 LDTSDMGPNTKHVLKVSLDD-------TKHEYYTVGTYSTAKDRYVPDEGS--VESDSGLRFDYGK-YYASKTFFDGAKN 324 (511)
Q Consensus 255 ~~~s~~~~~~k~vL~~S~~~-------~~~~~Y~iG~~d~~~~~F~p~~~~--~d~~~~~~lD~G~-fYA~qtf~d~~~g 324 (511)
+...+|||..+... ...+.|++|+||+ .+|+|+.+. .......+||+|+ |||||||.|..+|
T Consensus 234 ------~~~~~~vl~~g~~~~~~~~~~~~~~~Y~vG~~d~--~~f~~~~~~~~~~~~~~~~lD~G~dfYA~qtf~d~~~g 305 (353)
T d1y4wa2 234 ------GNSTKWVITSGLNPGGPPGTVGSGTQYFVGEFDG--TTFTPDADTVYPGNSTANWMDWGPDFYAAAGYNGLSLN 305 (353)
T ss_dssp ------SSCEEEEEEEEEESCCSTTCCSCEEEEEEEEECS--SCEEECTTTSCSSSSCCEESCSSSSCEEEEECBSCCGG
T ss_pred ------CCceEEEEEecccCCCCcccccccceEEEEEecC--ceeeecCCccccCCCccceeecCcCeeECCceeCCCCC
Confidence 23469999887532 2468999999986 478877542 2334567899999 9999999987679
Q ss_pred cEEEEEeccCCCCCCCCCCCCCccccccceEEEEecCC--CeEEecc
Q 010428 325 RRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSG--KHLVQWP 369 (511)
Q Consensus 325 rril~gW~~~~~~~~~~~~~gW~g~lslPReL~l~~~g--~~L~q~P 369 (511)
|||+||||++++...+..+.||+|+|||||||+|+++| .+|+|+|
T Consensus 306 Rri~~gW~~~~~~~~~~~~~gW~g~lslPReL~l~~~~~~~~L~Q~P 352 (353)
T d1y4wa2 306 DHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLVQQP 352 (353)
T ss_dssp GCEEEEECSCTTTGGGCCCSSEECCBCCCEEEEEEEETTEEEEEEEE
T ss_pred CEEEEEecCCCccCCCCCCCCcceeeEeCEEEEEEECCCCCEEEEcC
Confidence 99999999999887777789999999999999999653 3799998
|
| >d1oyga_ b.67.2.2 (A:) Levansucrase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Levansucrase domain: Levansucrase species: Bacillus subtilis [TaxId: 1423]
Probab=99.94 E-value=8.7e-27 Score=244.42 Aligned_cols=278 Identities=15% Similarity=0.128 Sum_probs=186.4
Q ss_pred ccCCcceEE-ECCEEEEEeeeCCCCCCCC---CcEEEEEEeCCCCcceecCCCCCCCC--------CccCCCeEeeeEEE
Q 010428 58 INDPNGVMI-YKGIYHLFYQYNPKGAVWG---NIVWAHSTSKDLINWIPHDPAIYPSQ--------QSDINGCWSGSATI 125 (511)
Q Consensus 58 ~NDPnG~~~-~~G~YHLFYQ~~P~~~~~g---~~~WgHa~S~DLvhW~~~~~aL~P~~--------~~D~~g~~SGsav~ 125 (511)
+.|++|-+. ++|.+++|++..|....+. ...+.|+.|+||.||++.+.++.+.. ..+..+-|||||++
T Consensus 57 l~d~~g~~~~~~G~~~~f~L~a~~~~~~d~~i~~~y~~~~s~dl~~W~~~G~vf~d~~~~~~~~~~~~~~~~eWSGSAv~ 136 (440)
T d1oyga_ 57 LQNADGTVANYHGYHIVFALAGDPKNADDTSIYMFYQKVGETSIDSWKNAGRVFKDSDKFDANDSILKDQTQEWSGSATF 136 (440)
T ss_dssp EECTTSSBCCBTTEEEEEEEEECTTCTTCCEEEEEEEETTCCSGGGCEEEEESCCTTHHHHTTCTTGGGCCEEEEEEEEE
T ss_pred eECCCCCEEEECCEEEEEEEeCCCCCCCCCeEEEEEeecCCCccCCCEECccccCCCccccccccccCCCCccCccceEE
Confidence 678888554 7999999999887533222 23456666899999999998775542 23345679999998
Q ss_pred cCCCceEEEEeccCCC--CcceEEEE---EecCCCCcccceeeecCCCceecCCCCCcC---------------CCCCCC
Q 010428 126 LPGEKPAIFYTGIDPH--NRQVQNLA---VPKNLSDPYLREWVKSPKNPLMAPDAMNQI---------------NTSSFR 185 (511)
Q Consensus 126 ~~dg~~~l~YTg~~~~--~~q~q~lA---~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~---------------~~~~fR 185 (511)
..||+++|||||.... ..|+...| +..+ ++...|++...+++|-.++...+ +..+||
T Consensus 137 ~~DG~~~LfYTg~~~~~~~~q~i~~a~~~~~~d---~~~~~~~~~~~~~~l~~pDG~~Yqt~~q~~~~~~~~~~d~~~fR 213 (440)
T d1oyga_ 137 TSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSAS---DSSLNINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLR 213 (440)
T ss_dssp CTTSCEEEEEEEEEGGGTTEEEEEEEEEEEEEC---SSCEEEEEEEEEEEEECCCSSSBCCHHHHHHHTGGGGTCCCCCE
T ss_pred ccCCeEEEEEEeccCCCCCcceEEEEEEEEeec---CCcceeecccCCceeecCCCccceeeecccccCCCCCCCccccc
Confidence 8899999999997542 22222222 1112 12367877766666643321222 345899
Q ss_pred CCEEEEeCCCCeEEEEEeeecC---C---------------------------------------ccEEEE-EEcCCCCC
Q 010428 186 DPTTAWLGPDKRWRVIIGSKIN---R---------------------------------------KGLAIL-YRSKDFVH 222 (511)
Q Consensus 186 DP~vvw~~~~g~w~m~~ga~~~---~---------------------------------------~G~i~l-y~S~Dl~~ 222 (511)
||+| |. ++|+|||++++... + .|.|.+ +.|+|+.+
T Consensus 214 DP~v-~~-~~g~~y~~fegn~~~~~G~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~ng~I~l~~~s~D~~~ 291 (440)
T d1oyga_ 214 DPHY-VE-DKGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDDYTL 291 (440)
T ss_dssp EEEE-EE-ETTEEEEEEEEEBCTTSCCSSGGGGGBGGGTCSCHHHHHHHHHHHHHSTTHHHHHHCCEEEEEEEECTTSSE
T ss_pred CCce-ee-eCCeEEEEEeccccccccccccchhccccccccccccccccccccccccccccceeccceEEEEEeCCCccc
Confidence 9995 55 47999999987641 0 134544 45999999
Q ss_pred cEEcccccccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeC-------CCce----eEEEEEEEeCCCCe
Q 010428 223 WIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD-------DTKH----EYYTVGTYSTAKDR 291 (511)
Q Consensus 223 W~~~~~~l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~-------~~~~----~~Y~iG~~d~~~~~ 291 (511)
|++.++++......+|||||++|+++ | ||+|+.|.. ..+. .+++|| |...+.
T Consensus 292 We~~~pLl~a~~v~d~~ErP~I~~~n--G-------------KYYLFtss~~~~~a~~~~~~~~~~~~g~Vs--dsl~Gp 354 (440)
T d1oyga_ 292 KKVMKPLIASNTVTDEIERANVFKMN--G-------------KWYLFTDSRGSKMTIDGITSNDIYMLGYVS--NSLTGP 354 (440)
T ss_dssp EEEEEEEEECTTTCSCCEEEEEEEET--T-------------EEEEEEEEEGGGCCCTTCCTTCEEEEEEEE--SSTTCC
T ss_pred ceecCcceeccCCCCeEECCEEEEEC--C-------------EEEEEEecccccccCCCcCCCCceEEEEEC--CCCCCC
Confidence 99987555555567799999999998 6 899987632 1222 224444 444567
Q ss_pred eecCCCC-cCCCCccccccCC-CccceeeecCCCCcEEEEEeccCCCCCCCCCCCCCccccccceEEEEecCC
Q 010428 292 YVPDEGS-VESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSG 362 (511)
Q Consensus 292 F~p~~~~-~d~~~~~~lD~G~-fYA~qtf~d~~~grril~gW~~~~~~~~~~~~~gW~g~lslPReL~l~~~g 362 (511)
|+|.+.. ...+.....|.+. .|+..+|.+....++++++||.+++... +..|.++-+.+|.|+.+.
T Consensus 355 y~PlN~sGlvl~~~~~~~~~~~~Ys~~~~p~g~~~~~lv~s~~~~~~~~~-----~~g~t~APt~~l~l~g~~ 422 (440)
T d1oyga_ 355 YKPLNKTGLVLKMDLDPNDVTFTYSHFAVPQAKGNNVVITSYMTNRGFYA-----DKQSTFAPSFLLNIKGKK 422 (440)
T ss_dssp CEEGGGTSEEEEECCCTTCTTCEEEEEEECCSSSSEEEEEEEESCTTSCS-----SCCCEECBCEEEEEETTE
T ss_pred CeecCCCcceeccCCCCCcCcccceeEEecCCCCceEEEEEeecCcCccc-----ccCCccCCcEEEEEcCCc
Confidence 8887632 1111223567788 5999999876567899999999987422 234777788889998544
|
| >d1vkda_ b.67.2.4 (A:) Hypothetical protein TM1225 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: TM1225-like predicted glycosylases domain: Hypothetical protein TM1225 species: Thermotoga maritima [TaxId: 2336]
Probab=99.73 E-value=2.6e-17 Score=166.13 Aligned_cols=155 Identities=16% Similarity=0.233 Sum_probs=115.8
Q ss_pred CcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecC-CCCCCCC---CccCCCeEeeeEEEcCCCceEEEEe
Q 010428 61 PNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHD-PAIYPSQ---QSDINGCWSGSATILPGEKPAIFYT 136 (511)
Q Consensus 61 PnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~-~aL~P~~---~~D~~g~~SGsav~~~dg~~~l~YT 136 (511)
| |+++++|+|||+|+.. ...+.++||+|+|+|+|||++.+ +++.|+. .++..||++++++.. +|+++|+||
T Consensus 48 p-~~i~~~g~~~ll~r~~---~~~~~~~ig~A~S~DGi~w~~~~~pv~~p~~~~~~~~~~gv~DPrv~~~-~d~yym~yt 122 (327)
T d1vkda_ 48 S-AVVPYNGEFVGVFRID---HKNTRPFLHFGRSKDGINWEIEPEEIQWVDVNGEPFQPSYAYDPRVVKI-EDTYYITFC 122 (327)
T ss_dssp E-EEEEETTEEEEEEEEE---ETTSCEEEEEEEESSSSSCEECSSCCCEECTTSCBCCCSSEEEEEEEEE-TTEEEEEEE
T ss_pred c-EEEEECCEEEEEEEec---CCCCceEEEEEEcCCccCCEeCCCCeecCCCCCcccccCcEEcceEEEE-CCEEEEEEE
Confidence 6 8999999999999964 24578899999999999999764 6677764 356789999999874 889999999
Q ss_pred ccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeC-CCCeEEEEEeeec---CCccEE
Q 010428 137 GIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLG-PDKRWRVIIGSKI---NRKGLA 212 (511)
Q Consensus 137 g~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~-~~g~w~m~~ga~~---~~~G~i 212 (511)
+.. ....+++|+|+|. ++|+|.. +++.+. -||+. +|.+ .+|+|+|+.-... ...|.|
T Consensus 123 ~~~--~~~~i~lA~S~D~-----~~w~k~g--~~~~~~---------~kd~~-lfpeki~Gky~ml~Rp~~~~~~~~~~I 183 (327)
T d1vkda_ 123 TDD--HGPTIGVGMTKDF-----KTFVRLP--NAYVPF---------NRNGV-LFPRKINGKYVMLNRPSDNGHTPFGDI 183 (327)
T ss_dssp EES--SSEEEEEEEESSS-----SSEEEEC--CSSSSS---------EEEEE-ECSSCBTTBEEEEEEECCSSSCSCCCE
T ss_pred ecC--CCcEEEEEEecCc-----chheecC--CccCcc---------ccCce-EeeeeccCeEEEEEeeccCCCcccceE
Confidence 864 3467899999985 8999973 333222 36776 4543 4899999964332 235679
Q ss_pred EEEEcCCCCCcEEcccccccCCCCCcee
Q 010428 213 ILYRSKDFVHWIKAKHPLHSVKGTGMWE 240 (511)
Q Consensus 213 ~ly~S~Dl~~W~~~~~~l~~~~~~g~wE 240 (511)
.+.+|+||.+|+....++. ....+.||
T Consensus 184 ~la~S~Dl~~W~~~~~v~~-~~~~~~wd 210 (327)
T d1vkda_ 184 FLSESPDMIHWGNHRFVLG-RSSYNWWE 210 (327)
T ss_dssp EEEEESSSSCBEEEEEEEC-CCSSCGGG
T ss_pred EEEcCCCcccccccceecc-cCCCCcee
Confidence 9999999999997643332 23334454
|
| >d1uv4a1 b.67.2.1 (A:3-293) Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Endo-1,5-arabinanase species: Bacillus subtilis [TaxId: 1423]
Probab=99.66 E-value=3.1e-15 Score=147.60 Aligned_cols=180 Identities=17% Similarity=0.155 Sum_probs=121.7
Q ss_pred ccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCc-------cCCCeEeeeEEEcCCCc
Q 010428 58 INDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQS-------DINGCWSGSATILPGEK 130 (511)
Q Consensus 58 ~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~-------D~~g~~SGsav~~~dg~ 130 (511)
++||+ +++++|+||||+..... ...+.+++|+||+||+.++.++.+.... -..++|.++++. .+|+
T Consensus 10 ihDP~-vi~~~g~YY~~~t~~~~-----~~g~~i~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~g~ 82 (291)
T d1uv4a1 10 LHDPT-MIKEGSSWYALGTGLTE-----ERGLRVLKSSDAKNWTVQKSIFTTPLSWWSNYVPNYGQNQWAPDIQY-YNGK 82 (291)
T ss_dssp CSSCE-EEEETTEEEEEEECCTT-----SSBEEEEEESSSSSCEEEEEETSSCCGGGGGTSTTCCSBCEEEEEEE-ETTE
T ss_pred ccCCE-EEEECCEEEEEEecCCC-----CCcEEEEECCCCCCCEECcccccCCcccccccCCccCCcccceEEEE-ECCE
Confidence 45996 89999999999874322 2357889999999999988776554221 135799999876 5999
Q ss_pred eEEEEeccCCC-CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCc
Q 010428 131 PAIFYTGIDPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRK 209 (511)
Q Consensus 131 ~~l~YTg~~~~-~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~ 209 (511)
++|+|++.... ....+++|+|++.. .-.|+.. ++++... . ......+||.+++. ++|++||+.+... .
T Consensus 83 yylyy~~~~~~~~~~~i~~a~s~~~~---~Gpw~~~--~~~~~~~--~-~~~~~~iDp~vf~D-~dG~~Y~~~~~~~--~ 151 (291)
T d1uv4a1 83 YWLYYSVSSFGSNTSAIGLASSTSIS---SGGWKDE--GLVIRST--S-SNNYNAIDPELTFD-KDGNPWLAFGSFW--S 151 (291)
T ss_dssp EEEEEEECCTTCSCEEEEEEEESCTT---TTCCEEE--EEEEEEC--T-TSSSCCCSCEEEEC-TTSCEEEEECBST--T
T ss_pred EEEEEEecCCCCCcceEEEEEeCCCC---CCCCCcC--ccccccc--c-CCCCCccCceEEEe-cCCcEEEEecccC--C
Confidence 99999987643 45677899997731 1247753 3444322 1 12345689997654 7899999997542 2
Q ss_pred cEEEEEE-cCCCCCcEEcccc---cccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 010428 210 GLAILYR-SKDFVHWIKAKHP---LHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (511)
Q Consensus 210 G~i~ly~-S~Dl~~W~~~~~~---l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~ 273 (511)
| |.+++ +.|. +...+.+ ........+.|||.+|+.+ | +++|++|..
T Consensus 152 ~-i~i~~l~~~~--~~~~g~~~~i~~~~~~~~~~EgP~i~k~~--g-------------~Yyl~~S~~ 201 (291)
T d1uv4a1 152 G-IKLTKLDKST--MKPTGSLYSIAARPNNGGALEAPTLTYQN--G-------------YYYLMVSFD 201 (291)
T ss_dssp C-EEEEEECTTT--CSEEEEEEEEECCTTTTTCEEEEEEEEET--T-------------EEEEEEEEE
T ss_pred c-eEEEeecccc--ccCcCceeEEEecCCCCccccccEEEEEC--C-------------EEEEEEecC
Confidence 3 55555 3443 3322322 1222345689999999997 6 899998864
|
| >d1gyha_ b.67.2.1 (A:) alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: alpha-L-arabinanase species: Cellvibrio cellulosa [TaxId: 155077]
Probab=99.53 E-value=1.7e-13 Score=135.22 Aligned_cols=182 Identities=18% Similarity=0.178 Sum_probs=118.5
Q ss_pred ccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCC-------ccCCCeEeeeEEEcCCCc
Q 010428 58 INDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQ-------SDINGCWSGSATILPGEK 130 (511)
Q Consensus 58 ~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~-------~D~~g~~SGsav~~~dg~ 130 (511)
+.||+ +++++|+||||.... ++..++|+||+||+.++.+|.+... ....++|+++++. .+|+
T Consensus 7 ~~DP~-v~~~~g~yYl~~t~~---------gi~~~~S~DLvnW~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~g~ 75 (318)
T d1gyha_ 7 VHDPV-MTREGDTWYLFSTGP---------GITIYSSKDRVNWRYSDRAFATEPTWAKRVSPSFDGHLWAPDIYQ-HKGL 75 (318)
T ss_dssp CSSCE-EEEETTEEEEEESEE---------TCEEEEESSSSEEEEEEESSSSCCTTHHHHCTTCCSEEEEEEEEE-ETTE
T ss_pred CCCCE-EEEECCEEEEEEeeC---------CEEEEECCCCCCCeECCccccCCccccccCCCcCCCceECCEEEE-EcCc
Confidence 56997 788999999986531 2556789999999999988765432 1235799999886 5899
Q ss_pred eEEEEeccCCC-CcceEEEEEecCCC-CcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCC
Q 010428 131 PAIFYTGIDPH-NRQVQNLAVPKNLS-DPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINR 208 (511)
Q Consensus 131 ~~l~YTg~~~~-~~q~q~lA~s~d~~-d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~ 208 (511)
++|||++.... ....+++|++.... +.....|++. ..+.... +......++||.++ .+++|++||++++...
T Consensus 76 ~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~iDp~v~-~d~dG~~Yl~~~~~~~- 149 (318)
T d1gyha_ 76 FYLYYSVSAFGKNTSAIGVTVNKTLNPASPDYRWEDK--GIVIESV--PQRDLWNAIAPAII-ADDHGQVWMSFGSFWG- 149 (318)
T ss_dssp EEEEEEECCTTSCCEEEEEEEESCSCTTSTTCCCEEE--EEEEEEC--TTTCSSCCCCCEEE-ECTTSCEEEEECBSTT-
T ss_pred eEEEEEEecCCCcccceeEEEEeccCCCccccccccC--ceecccC--CCCCCCceEccceE-eecCCcEEEeccCCCC-
Confidence 99999997653 45567777775421 1112567764 2333333 23345678999964 4589999999986432
Q ss_pred ccEEEEEE-cCCCC------CcEEccc----ccccC--CCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 010428 209 KGLAILYR-SKDFV------HWIKAKH----PLHSV--KGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (511)
Q Consensus 209 ~G~i~ly~-S~Dl~------~W~~~~~----~l~~~--~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~ 273 (511)
+ +.+.+ +.|+. .|..... ++... ....++|||.+|+.+ | +++|++|..
T Consensus 150 -~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~EgP~i~k~~--g-------------~yyl~yS~~ 210 (318)
T d1gyha_ 150 -G-LKLFKLNDDLTRPAEPQEWHSIAKLERSVLMDDSQAGSAQIEAPFILRKG--D-------------YYYLFASWG 210 (318)
T ss_dssp -C-EEEEEBCTTSSSBCSSCCEEEEECCCCCTTSCTTSCCSCCEEEEEEEEET--T-------------EEEEEEEES
T ss_pred -C-eeeEecCccceeeccccccccccccccceeeccCCCCCceeecCEEEEEC--C-------------EEEEEEecC
Confidence 2 23333 23322 2322211 11111 134589999999998 5 899998864
|
| >d1wl7a1 b.67.2.1 (A:2-313) Arabinanase-TS {Bacillus thermodenitrificans [TaxId: 33940]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Arabinanase-TS species: Bacillus thermodenitrificans [TaxId: 33940]
Probab=99.49 E-value=4.4e-13 Score=132.59 Aligned_cols=182 Identities=18% Similarity=0.201 Sum_probs=119.8
Q ss_pred CCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCC--------CccCCCeEeeeEEEcC
Q 010428 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQ--------QSDINGCWSGSATILP 127 (511)
Q Consensus 56 gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~--------~~D~~g~~SGsav~~~ 127 (511)
-|..||+ +++++|+|+||... .++..++|+||+||+..+.+|.... ..+..++|++.++. .
T Consensus 22 ~~~~DP~-i~~~~g~yY~~~t~---------~gi~i~~S~DL~nW~~~g~~l~~~~~~~~~~~~~~~~~~~WAP~v~~-~ 90 (312)
T d1wl7a1 22 LWAHDPV-IAKEGSRWYVFHTG---------SGIQIKTSEDGVHWENMGRVFPSLPDWCKQYVPEKDEDHLWAPDICF-Y 90 (312)
T ss_dssp CBCSSCE-EEEETTEEEEEESE---------ETCEEEEESSSSEEEEEEESCSSCCTTHHHHCTTCCSCEEEEEEEEE-E
T ss_pred cCcCCCE-EEEECCEEEEEEec---------CCceEEEcCCCCCceECcccccCCcccccccCCcccCCceEcceEEE-e
Confidence 4778996 88999999998542 1467899999999999988875432 24567899999987 5
Q ss_pred CCceEEEEeccCCC-CcceEEEEEecC--CCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEee
Q 010428 128 GEKPAIFYTGIDPH-NRQVQNLAVPKN--LSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGS 204 (511)
Q Consensus 128 dg~~~l~YTg~~~~-~~q~q~lA~s~d--~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga 204 (511)
+|+++|+||+.... ....+++|.+.. ..+|. ..|++. .|++... ......++||.+++ +++|++||+.+.
T Consensus 91 ~g~yyl~~t~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~--~~~~~~~---~~~~~~~iD~~~f~-d~dG~~y~~~~~ 163 (312)
T d1wl7a1 91 NGIYYLYYSVSTFGKNTSVIGLATNRTLDPRDPD-YEWKDM--GPVIHST---ASDNYNAIDPNVVF-DQEGQPWLSFGS 163 (312)
T ss_dssp TTEEEEEEEECCTTCCCEEEEEEEESCSCTTSTT-CCCEEE--EEEEEEC---TTSSSCCCSCEEEE-CTTSCEEEEECB
T ss_pred CCEEEEEEEeecCCcccceeeEEEEecccCCCCc-cccccc--cceecCC---CCCCCCcCCCceeE-ccCCcEEEeecC
Confidence 89999999987653 445566665432 22332 456653 4555332 12335689999654 589999999876
Q ss_pred ecCCccEEEEEE-cCCCCCcEEcccccc---cCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 010428 205 KINRKGLAILYR-SKDFVHWIKAKHPLH---SVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (511)
Q Consensus 205 ~~~~~G~i~ly~-S~Dl~~W~~~~~~l~---~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~ 273 (511)
.. +.+.+++ +.|..........+. ........|+|.+|+.+ | +++|++|..
T Consensus 164 ~~---~~i~~~~l~~d~~~~~~~~~~i~~~~~~~~~~~~EgP~v~k~~--g-------------~yYl~ys~~ 218 (312)
T d1wl7a1 164 FW---SGIQLIQLDTETMKPAAQAELLTIASRGEEPNAIEAPFIVCRN--G-------------YYYLFVSFD 218 (312)
T ss_dssp ST---TCEEEEEBCTTTCSBCTTCCCEEEECCSSSSCCEEEEEEEEET--T-------------EEEEEEEES
T ss_pred CC---CceeEEEEcCcCCcCcCCceEEEecccCCCCCcccccEEEEEC--C-------------cEEEEEecC
Confidence 43 2355555 344332211111111 11234578999999987 5 899998864
|
| >d1y7ba2 b.67.2.1 (A:4-324) Beta-D-xylosidase N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.37 E-value=8e-11 Score=116.33 Aligned_cols=179 Identities=14% Similarity=0.078 Sum_probs=115.5
Q ss_pred CCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCC------CccCCCeEeeeEEEcCCC
Q 010428 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQ------QSDINGCWSGSATILPGE 129 (511)
Q Consensus 56 gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~------~~D~~g~~SGsav~~~dg 129 (511)
|+..||. +++++|+|+||+......+ .+.-++|+||+||+.++.+|.... ..+..++|.+.++. .+|
T Consensus 8 ~~~aDP~-v~~~~~~yY~~~tt~~~~~-----gi~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~g 80 (321)
T d1y7ba2 8 GFNPDPS-ICRADTDYYIATSTFEWFP-----GVQIHHSKDLVNWHLVAHPLNRTSLLDMKGNPNSGGIWAPDLSY-HDG 80 (321)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBTEES-----BCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEECSCEEEE-ETT
T ss_pred CCCCCCE-EEEECCEEEEEEecCCCCC-----CeEEEECCCccCCEEccccccCCcccccCCCcccCcccCceEEE-ECC
Confidence 4567995 8889999999987433211 245578999999999987764332 33456799999876 599
Q ss_pred ceEEEEeccCCC----CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeee
Q 010428 130 KPAIFYTGIDPH----NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSK 205 (511)
Q Consensus 130 ~~~l~YTg~~~~----~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~ 205 (511)
+++|+|+..... ..+.+.+|++++..+| |+.. ..+ .....||.++ .+++|+.+|+.+..
T Consensus 81 ~yylyys~~~~~~~~~~~~~~~~a~a~~p~Gp----~~~~---~~~---------~~~~~D~~~~-~d~dg~~~~~~~~~ 143 (321)
T d1y7ba2 81 KFWLIYTDVKVTDGMWKDCHNYLTTCESVDGV----WSDP---ITL---------NGSGFDASLF-HDNDGKKYLVNMYW 143 (321)
T ss_dssp EEEEEEEEESCCSSSCCCEEEEEEEESSTTSC----CCCC---EEC---------CCSCSCCEEE-ECTTSCEEEEEEEE
T ss_pred EEEEEEEeeccCCCCccceeeEeeecCCCCCC----cccc---eee---------cccccCCcEE-EEcCCCEEEEEecc
Confidence 999999986542 3456778888775432 4321 111 1235799854 45789999988765
Q ss_pred cC-----CccEEEEE-EcCCCCCcEEcccccccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 010428 206 IN-----RKGLAILY-RSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (511)
Q Consensus 206 ~~-----~~G~i~ly-~S~Dl~~W~~~~~~l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~ 273 (511)
.. ..+.+.+. .+.|..+..-....+.........|.|.+|+-+ | +++|..|..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Egp~v~k~~--g-------------~yyl~~s~~ 202 (321)
T d1y7ba2 144 DQRTYNHNFYGIVLQEYSDKEKKLIGKAKIIYKGTDIKYTEGPHIYHIG--D-------------YYYLFTAEG 202 (321)
T ss_dssp CCCTTSCSEEEEEEEEEETTTTEEEEEEEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEES
T ss_pred CCCccccCccceeeEeeCCCcceEcCCceEEeeccCCCccccceEEEEC--C-------------EEEEEEcCC
Confidence 31 12233333 356665543222222222334467999999986 5 788887764
|
| >d1yrza2 b.67.2.1 (A:1004-1320) Beta-D-xylosidase N-terminal domain {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Bacillus halodurans [TaxId: 86665]
Probab=99.35 E-value=9.6e-11 Score=115.88 Aligned_cols=178 Identities=17% Similarity=0.150 Sum_probs=113.2
Q ss_pred CCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCC------CccCCCeEeeeEEEcCCC
Q 010428 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQ------QSDINGCWSGSATILPGE 129 (511)
Q Consensus 56 gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~------~~D~~g~~SGsav~~~dg 129 (511)
|+..||. +++++|+||||+..+... ..+..++|+||+||+.++.+|.... ......+|.+.++. .+|
T Consensus 9 ~~~aDP~-vi~~~~~yY~~~tt~~~~-----~gi~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~G 81 (317)
T d1yrza2 9 GFHPDPS-IVRVGDDYYIATSTFEWF-----PGVRIHHSRDLKHWRFVSSPLTRTSQLDMKGNMNSGGIWAPCLSY-HDG 81 (317)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBTEE-----SBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEECSCEEEE-ETT
T ss_pred CCCCCCE-EEEECCEEEEEEccCCCC-----CCeEEEECCCCCCCeECCccccCccccccCCCcccceeecceEEE-ECC
Confidence 5678995 789999999998632211 1244578999999999987775432 23345689999876 599
Q ss_pred ceEEEEeccCC----CCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeee
Q 010428 130 KPAIFYTGIDP----HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSK 205 (511)
Q Consensus 130 ~~~l~YTg~~~----~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~ 205 (511)
++||+|++... .....+.+|++++..+ .|+ .|+... ....||.++ .+++|+.||+.+..
T Consensus 82 ~~ylyy~~~~~~~~~~~~~~~~~~~a~~p~g----p~~----~~~~~~--------~~~iDp~~f-~D~dG~~Yl~~~~~ 144 (317)
T d1yrza2 82 TFYLIYTDVKQWHGAFKDAHNYLVTAQNIEG----PWS----DPIYLN--------SSGFDPSLF-HDDDGRKWLVNMIW 144 (317)
T ss_dssp EEEEEEEEEEECSSSCCEEEEEEEEESSSSS----CCC----CCEECC--------CSCSCCEEE-ECTTSCEEEEEEEE
T ss_pred EEEEEEEEeccCCCCcccceEEEEecCCCCC----Ccc----ceeeec--------CCccCCcEE-EecCCCEEEEEecc
Confidence 99999987532 1234456677766432 343 233221 235799964 45899999998765
Q ss_pred cCC-----ccEEEEEE-cCCCCCcEEcccc--cccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCC
Q 010428 206 INR-----KGLAILYR-SKDFVHWIKAKHP--LHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD 274 (511)
Q Consensus 206 ~~~-----~G~i~ly~-S~Dl~~W~~~~~~--l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~ 274 (511)
... ...+.+.. +.+ .++..+.+ +.........|.|.+|+.+ | +++|++|...
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~Egp~i~k~~--g-------------~yyl~~s~~~ 204 (317)
T d1yrza2 145 DYRKGNHPFAGIILQEYSEA--EQKLVGPVKNIYKGTDIQLTEGPHLYKKD--G-------------YYYLLVAEGG 204 (317)
T ss_dssp CCCTTSCSEEEEEEEEEETT--TTEEEEEEEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEESC
T ss_pred CcCCCCccccceeeeecCcc--cCeEcCCceEEEeccCCCcccCceEEEEC--C-------------EEEEEEccCC
Confidence 421 11233333 333 34444432 2222234578999999987 6 8888888654
|
| >d2exha2 b.67.2.1 (A:3-324) Beta-D-xylosidase N-terminal domain {Geobacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Geobacillus stearothermophilus [TaxId: 1422]
Probab=99.28 E-value=1.1e-09 Score=108.41 Aligned_cols=179 Identities=17% Similarity=0.142 Sum_probs=114.6
Q ss_pred CCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCC------CccCCCeEeeeEEEcCCC
Q 010428 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQ------QSDINGCWSGSATILPGE 129 (511)
Q Consensus 56 gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~------~~D~~g~~SGsav~~~dg 129 (511)
|+..||. +++++|+||||+.-.. +...+..++|+||+||+..+.+|.... ..+..++|.+.+.. .+|
T Consensus 9 ~~~aDP~-v~~~~~~yY~~~tt~~-----~~~g~~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~~WAPev~~-~~G 81 (322)
T d2exha2 9 GFHPDPS-ICRVGDDYYIAVSTFE-----WFPGVRIYHSKDLKNWRLVARPLNRLSQLNMIGNPDSGGVWAPHLSY-SDG 81 (322)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBT-----EESBCEEEEESSSSSCEEEECCBCSTTTCCCTTCCTTCBBCSCEEEE-ETT
T ss_pred CCCCCCE-EEEECCEEEEEEcCCC-----CCCCcEEEECCCcCCcEEcccccccccccccCCCcccCCcccceEEE-ECC
Confidence 6678995 7899999999986321 111355678999999999887764321 23456799999876 599
Q ss_pred ceEEEEeccCCC----CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeee
Q 010428 130 KPAIFYTGIDPH----NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSK 205 (511)
Q Consensus 130 ~~~l~YTg~~~~----~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~ 205 (511)
++||+|+..... ......+|.+++... .|++ |+... ....||.++ .+++|+.||+.+..
T Consensus 82 ~yylyys~~~~~~~~~~~~~~~~~~sd~~~g----p~~~----~~~~~--------~~~~dp~~f-~d~dG~~Yl~~~~~ 144 (322)
T d2exha2 82 KFWLIYTDVKVVEGQWKDGHNYLVTCDTIDG----AWSD----PIYLN--------SSGFDPSLF-HDEDGRKYLVNMYW 144 (322)
T ss_dssp EEEEEEEEECCCSSSCCCEEEEEEEESSTTS----CCCC----CEECC--------CSCSCCEEE-ECTTSCEEEEEEEE
T ss_pred EEEEEEEeecccCCCccccceEEEecCCCCC----Cccc----ceEec--------CCCCCCCeE-EEcCCCEEEEeccc
Confidence 999999975431 223445676665432 3432 33221 235799854 45799999998865
Q ss_pred cCC---c--cEEEEEEcCCCCCcEEccccc--ccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCC
Q 010428 206 INR---K--GLAILYRSKDFVHWIKAKHPL--HSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD 274 (511)
Q Consensus 206 ~~~---~--G~i~ly~S~Dl~~W~~~~~~l--~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~ 274 (511)
... . ..+.+. ..+...|+..+++. .........|.|.+|+.+ | +++|++|...
T Consensus 145 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Egp~i~k~~--g-------------~YYl~~s~~~ 204 (322)
T d2exha2 145 DHRVDHHPFYGIVLQ-EYSVEQKKLVGEPKIIFKGTDLRITEGPHLYKIN--G-------------YYYLLTAEGG 204 (322)
T ss_dssp CCCTTSCSEEEEEEE-EEETTTTEEEEEEEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEESC
T ss_pred CCccCcCCccceEEe-eecCcCCeECCCcEEEEEecCCCcccCcEEEEEC--C-------------EEEEEEeCCC
Confidence 421 1 122222 23344566655432 222234578999999987 6 8888888654
|
| >d1vkda_ b.67.2.4 (A:) Hypothetical protein TM1225 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: TM1225-like predicted glycosylases domain: Hypothetical protein TM1225 species: Thermotoga maritima [TaxId: 2336]
Probab=99.23 E-value=4.1e-11 Score=120.07 Aligned_cols=125 Identities=11% Similarity=0.129 Sum_probs=94.6
Q ss_pred eCCCCcceec-CCCCCCCCCccCCCeEeeeEEEcCCCceEEEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceec
Q 010428 94 SKDLINWIPH-DPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMA 172 (511)
Q Consensus 94 S~DLvhW~~~-~~aL~P~~~~D~~g~~SGsav~~~dg~~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~ 172 (511)
|++++ |++. .++|.|...+...++|.+.|++ .+|+++|+|.+.+.++...+++|+|+|+ +||+|.+ .||+.
T Consensus 21 ~~~~~-~R~~~NPil~~~~~~~~~~vfNp~~i~-~~g~~~ll~r~~~~~~~~~ig~A~S~DG-----i~w~~~~-~pv~~ 92 (327)
T d1vkda_ 21 YTGPV-WRYSKNPIIGRNPVPKGARVFNSAVVP-YNGEFVGVFRIDHKNTRPFLHFGRSKDG-----INWEIEP-EEIQW 92 (327)
T ss_dssp CCSSE-EECTTCCSBCBSCSTTEEEEEEEEEEE-ETTEEEEEEEEEETTSCEEEEEEEESSS-----SSCEECS-SCCCE
T ss_pred CCCCc-eecCCCccccCCCCcchhceeccEEEE-ECCEEEEEEEecCCCCceEEEEEEcCCc-----cCCEeCC-CCeec
Confidence 45554 5544 3678888766778899999887 5999999999877777788999999996 8999975 57774
Q ss_pred CC-CCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCccEEEEEEcCCCCCcEEcccc
Q 010428 173 PD-AMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHP 229 (511)
Q Consensus 173 ~p-~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~ 229 (511)
+. ..+.++...++||.|+.. +++|||++.+.. +..++.+++|+|+++|++.+..
T Consensus 93 p~~~~~~~~~~gv~DPrv~~~--~d~yym~yt~~~-~~~~i~lA~S~D~~~w~k~g~~ 147 (327)
T d1vkda_ 93 VDVNGEPFQPSYAYDPRVVKI--EDTYYITFCTDD-HGPTIGVGMTKDFKTFVRLPNA 147 (327)
T ss_dssp ECTTSCBCCCSSEEEEEEEEE--TTEEEEEEEEES-SSEEEEEEEESSSSSEEEECCS
T ss_pred CCCCCcccccCcEEcceEEEE--CCEEEEEEEecC-CCcEEEEEEecCcchheecCCc
Confidence 33 112344567899997654 679999998764 3346889999999999987643
|
| >d1uv4a1 b.67.2.1 (A:3-293) Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Endo-1,5-arabinanase species: Bacillus subtilis [TaxId: 1423]
Probab=98.09 E-value=1.2e-05 Score=77.60 Aligned_cols=144 Identities=15% Similarity=0.200 Sum_probs=86.8
Q ss_pred eEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCc--ceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEEEeccCCC
Q 010428 64 VMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLIN--WIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPH 141 (511)
Q Consensus 64 ~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvh--W~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~l~YTg~~~~ 141 (511)
+++++|+|||||.....+. +....++|+|+|... |++.+..+.+....+ .....+++++++||+.||+|.....
T Consensus 76 v~~~~g~yylyy~~~~~~~--~~~~i~~a~s~~~~~Gpw~~~~~~~~~~~~~~-~~~iDp~vf~D~dG~~Y~~~~~~~~- 151 (291)
T d1uv4a1 76 IQYYNGKYWLYYSVSSFGS--NTSAIGLASSTSISSGGWKDEGLVIRSTSSNN-YNAIDPELTFDKDGNPWLAFGSFWS- 151 (291)
T ss_dssp EEEETTEEEEEEEECCTTC--SCEEEEEEEESCTTTTCCEEEEEEEEECTTSS-SCCCSCEEEECTTSCEEEEECBSTT-
T ss_pred EEEECCEEEEEEEecCCCC--CcceEEEEEeCCCCCCCCCcCccccccccCCC-CCccCceEEEecCCcEEEEecccCC-
Confidence 7889999999999765432 356789999999865 988754433332222 2345788888888999999965431
Q ss_pred CcceEEEEE-ecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecC--C--cc-EEEEE
Q 010428 142 NRQVQNLAV-PKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN--R--KG-LAILY 215 (511)
Q Consensus 142 ~~q~q~lA~-s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~--~--~G-~i~ly 215 (511)
.+.++. +.+. ...... ...+...+ . ....+.-|. +++ .+|+|||++++..- + .+ ++.++
T Consensus 152 ---~i~i~~l~~~~-----~~~~g~-~~~i~~~~--~--~~~~~EgP~-i~k-~~g~Yyl~~S~~~~~~~~~~~y~v~~~ 216 (291)
T d1uv4a1 152 ---GIKLTKLDKST-----MKPTGS-LYSIAARP--N--NGGALEAPT-LTY-QNGYYYLMVSFDKCCDGVNSTYKIAYG 216 (291)
T ss_dssp ---CEEEEEECTTT-----CSEEEE-EEEEECCT--T--TTTCEEEEE-EEE-ETTEEEEEEEEECSSSSSCCEEEEEEE
T ss_pred ---ceEEEeecccc-----ccCcCc-eeEEEecC--C--CCccccccE-EEE-ECCEEEEEEecCcccCCCCCCceeEEE
Confidence 233332 2221 111111 11222222 1 112245687 456 58999999987541 1 11 57788
Q ss_pred EcCCCCC-cEEc
Q 010428 216 RSKDFVH-WIKA 226 (511)
Q Consensus 216 ~S~Dl~~-W~~~ 226 (511)
+|+++.. |+..
T Consensus 217 ~s~~~~GP~~~~ 228 (291)
T d1uv4a1 217 RSKSITGPYLDK 228 (291)
T ss_dssp EESSTTCCCBCT
T ss_pred EcCCCCCCCccC
Confidence 9998864 7543
|
| >d1uypa2 b.67.2.3 (A:1-294) Beta-fructosidase (invertase), N-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Beta-fructosidase (invertase), N-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=97.82 E-value=8.2e-05 Score=72.15 Aligned_cols=127 Identities=10% Similarity=0.086 Sum_probs=84.4
Q ss_pred eEEECCEEEEEeeeCCC--CCCCCCcEEEEEEeCCCCcceecC--CCCCCCCCccCCCeEeeeEEEcCCCceEEEEeccC
Q 010428 64 VMIYKGIYHLFYQYNPK--GAVWGNIVWAHSTSKDLINWIPHD--PAIYPSQQSDINGCWSGSATILPGEKPAIFYTGID 139 (511)
Q Consensus 64 ~~~~~G~YHLFYQ~~P~--~~~~g~~~WgHa~S~DLvhW~~~~--~aL~P~~~~D~~g~~SGsav~~~dg~~~l~YTg~~ 139 (511)
++..+|++++||..+-. ..........+|+|+|+++|++.+ ++|.+.........-.+.|.. ++|+++|++.+..
T Consensus 78 av~~~g~~~~~yT~~~~~~~~~~~~~~~~~a~s~dg~~w~k~~~npvi~~~~~~~~~~fRDP~V~~-~~g~w~M~~g~~~ 156 (294)
T d1uypa2 78 AVEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLDFVKYDGNPVISKPPEEGTHAFRDPKVNR-SNGEWRMVLGSGK 156 (294)
T ss_dssp EEEETTEEEEEEEEEECCCSSCCCEEEEEEEEESSSSCCEECTTCCSBCSCSSTTEEEEEEEEEEE-ETTEEEEEEEEEE
T ss_pred EEecCCeEEEEEEEeeCCCCCCcceeeeEEEECCCCCceEeecCCceecCCCccCccccCCCcccc-cCCEEEEEEEeee
Confidence 45589999999986532 122224566889999999999873 455544332333456677765 5899999987755
Q ss_pred CCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeee
Q 010428 140 PHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSK 205 (511)
Q Consensus 140 ~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~ 205 (511)
.++.-...+..|+| |++|+.. .++...+ .+ ..+.-|- ++. -+++|+|+++..
T Consensus 157 ~~~~G~i~ly~S~D-----l~~W~~~--g~l~~~~--~~---~~~ECPd-lf~-l~~~~vl~~s~~ 208 (294)
T d1uypa2 157 DEKIGRVLLYTSDD-----LFHWKYE--GAIFEDE--TT---KEIECPD-LVR-IGEKDILIYSIT 208 (294)
T ss_dssp TTTEEEEEEEEESS-----SSSEEEE--EEEEEET--TC---SCEEEEE-EEE-ETTEEEEEEEET
T ss_pred cCCccEEEEEEcCC-----ccceeEe--ccceeCC--CC---Cceeece-EEE-eCCeeEEEEEec
Confidence 44445567788877 4899874 4666443 21 2356677 455 578999998764
|
| >d1yrza2 b.67.2.1 (A:1004-1320) Beta-D-xylosidase N-terminal domain {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Bacillus halodurans [TaxId: 86665]
Probab=97.80 E-value=0.00012 Score=70.87 Aligned_cols=79 Identities=19% Similarity=0.252 Sum_probs=52.9
Q ss_pred CCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCccEEEEEEcCCCCCcEEcccccccCC--------CCCc
Q 010428 167 KNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVK--------GTGM 238 (511)
Q Consensus 167 ~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~--------~~g~ 238 (511)
+||||.. .+.||.|+. .+++|||+........| +.+++|+||++|+..+..+.... ..+.
T Consensus 3 ~NPv~~~---------~~aDP~vi~--~~~~yY~~~tt~~~~~g-i~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~ 70 (317)
T d1yrza2 3 QNPILPG---------FHPDPSIVR--VGDDYYIATSTFEWFPG-VRIHHSRDLKHWRFVSSPLTRTSQLDMKGNMNSGG 70 (317)
T ss_dssp ESCSBCS---------SCCSCEEEE--ETTEEEEEECCBTEESB-CEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCE
T ss_pred cCCCCCC---------CCCCCEEEE--ECCEEEEEEccCCCCCC-eEEEECCCCCCCeECCccccCccccccCCCcccce
Confidence 5899842 268999764 46789987643221223 67899999999998876543221 1223
Q ss_pred eecCceEEeccCCCCCccccCCCCCceeEEEEee
Q 010428 239 WECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSL 272 (511)
Q Consensus 239 wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~ 272 (511)
.-.|++...+ | +|+|.++.
T Consensus 71 ~WAP~v~~~~--G-------------~~ylyy~~ 89 (317)
T d1yrza2 71 IWAPCLSYHD--G-------------TFYLIYTD 89 (317)
T ss_dssp ECSCEEEEET--T-------------EEEEEEEE
T ss_pred eecceEEEEC--C-------------EEEEEEEE
Confidence 4469999987 6 77777664
|
| >d2b4wa1 b.67.2.5 (A:2-311) Hypothetical protein LmjF10.1260 {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: LmjF10.1260-like domain: Hypothetical protein LmjF10.1260 species: Leishmania major [TaxId: 5664]
Probab=97.66 E-value=0.00012 Score=70.92 Aligned_cols=140 Identities=10% Similarity=-0.015 Sum_probs=96.7
Q ss_pred CCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEEEeccC
Q 010428 60 DPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGID 139 (511)
Q Consensus 60 DPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~l~YTg~~ 139 (511)
+|..++.++|+|||+++--..+ .|...+.+.+++++..+|+..+. |. -|+-.+.++.. +|+++|-||...
T Consensus 31 N~~apf~~~Gk~~l~~RvE~rd-~~s~s~v~lf~~~g~~~f~~~~~---p~-----~glEDPrvt~i-~g~lv~~~t~~~ 100 (310)
T d2b4wa1 31 NCSVPFSYKGKTHIYGRVEKRD-IWAASHVRLFEETGKDEFTAVPE---LS-----WELEDPYIAKI-NNEMIFGGTRVR 100 (310)
T ss_dssp SCCCCEEETTEEEEEEEEECTT-CSSCCEEEEEEEEETTEEEECTT---CC-----BSCEEEEEEEE-TTEEEEEEEEEC
T ss_pred cCCcEEEECCEEEEEEEEEccC-cceEEEEEEEEecCCcceEECCc---cc-----ccCCCCCEEeE-CCEEEEEEEEec
Confidence 4656788999999999988654 45677888889999999997653 21 36778888875 899999999876
Q ss_pred CCCcceEEEEEecCCCCcccceeeecCCCceec-CCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCccEEEEEEcC
Q 010428 140 PHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMA-PDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSK 218 (511)
Q Consensus 140 ~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~-~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~ly~S~ 218 (511)
.. ....++|.+.+ +++|.+ ..|++. .| + ..+|-. +..-.+|+|.|+.--+..+.|.|.+..++
T Consensus 101 ~~-~~~~~~~~t~~-----~r~~~~--~l~~f~~gp--~-----~~Kdi~-L~e~~dGKy~~ftRP~~g~~g~Ig~~~~d 164 (310)
T d2b4wa1 101 KN-GNAILSYYGYF-----YRGTPD--ELTYFTRGP--G-----CMKDIR-VLQLQDGRLGVFSRPRVGRKASIGFVILN 164 (310)
T ss_dssp ------CCCEEEEE-----EEEETT--EEEEEEECC--T-----TCCCCE-EEECTTSCEEEEECCCC---CCEEEEEES
T ss_pred CC-CCcceEEEeee-----eecchh--cCceeecCC--C-----ccccEE-eEEeeCCEEEEEEccccCCCCeeEEEEeC
Confidence 42 23445666654 366764 346663 33 2 236654 33446999999986655556789999999
Q ss_pred CCCCcEE
Q 010428 219 DFVHWIK 225 (511)
Q Consensus 219 Dl~~W~~ 225 (511)
||.+|+.
T Consensus 165 ~l~~~t~ 171 (310)
T d2b4wa1 165 SIDELGA 171 (310)
T ss_dssp CGGGCSH
T ss_pred ChhhCCH
Confidence 9999973
|
| >d1y7ba2 b.67.2.1 (A:4-324) Beta-D-xylosidase N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Clostridium acetobutylicum [TaxId: 1488]
Probab=97.65 E-value=0.00036 Score=67.30 Aligned_cols=79 Identities=27% Similarity=0.353 Sum_probs=54.7
Q ss_pred CCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCccEEEEEEcCCCCCcEEcccccccCC--------CCCc
Q 010428 167 KNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVK--------GTGM 238 (511)
Q Consensus 167 ~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~--------~~g~ 238 (511)
.||||.. ++-||.|+. .+|+|||+........| |.+++|+||.+|+..+..+.... ..+.
T Consensus 2 ~NPv~~~---------~~aDP~v~~--~~~~yY~~~tt~~~~~g-i~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~ 69 (321)
T d1y7ba2 2 KNPILRG---------FNPDPSICR--ADTDYYIATSTFEWFPG-VQIHHSKDLVNWHLVAHPLNRTSLLDMKGNPNSGG 69 (321)
T ss_dssp ESCSBCS---------SCCSCEEEE--ETTEEEEEECCBTEESB-CEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCE
T ss_pred CCCcCCC---------CCCCCEEEE--ECCEEEEEEecCCCCCC-eEEEECCCccCCEEccccccCCcccccCCCcccCc
Confidence 4899843 267999764 48899998764321123 67899999999999875443211 1235
Q ss_pred eecCceEEeccCCCCCccccCCCCCceeEEEEee
Q 010428 239 WECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSL 272 (511)
Q Consensus 239 wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~ 272 (511)
.-.|+++..+ | +|+|.++.
T Consensus 70 ~WAP~v~~~~--g-------------~yylyys~ 88 (321)
T d1y7ba2 70 IWAPDLSYHD--G-------------KFWLIYTD 88 (321)
T ss_dssp ECSCEEEEET--T-------------EEEEEEEE
T ss_pred ccCceEEEEC--C-------------EEEEEEEe
Confidence 6679999987 6 78887775
|
| >d1gyha_ b.67.2.1 (A:) alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: alpha-L-arabinanase species: Cellvibrio cellulosa [TaxId: 155077]
Probab=97.59 E-value=0.00039 Score=66.49 Aligned_cols=155 Identities=13% Similarity=0.135 Sum_probs=84.5
Q ss_pred CCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCC----CCcceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEEE
Q 010428 60 DPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKD----LINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFY 135 (511)
Q Consensus 60 DPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~D----LvhW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~l~Y 135 (511)
-| -+++.+|+|||||.....+.....+..+.+.+.+ ..+|++.+..+......+......++++++.||+.||+|
T Consensus 66 AP-~v~~~~g~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iDp~v~~d~dG~~Yl~~ 144 (318)
T d1gyha_ 66 AP-DIYQHKGLFYLYYSVSAFGKNTSAIGVTVNKTLNPASPDYRWEDKGIVIESVPQRDLWNAIAPAIIADDHGQVWMSF 144 (318)
T ss_dssp EE-EEEEETTEEEEEEEECCTTSCCEEEEEEEESCSCTTSTTCCCEEEEEEEEECTTTCSSCCCCCEEEECTTSCEEEEE
T ss_pred CC-EEEEEcCceEEEEEEecCCCcccceeEEEEeccCCCccccccccCceecccCCCCCCCceEccceEeecCCcEEEec
Confidence 45 4788999999999987655433334444444432 468988765443332222223345788888899999998
Q ss_pred eccCCCCcceEEEEEecCC-C---Cc-ccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeec-C--
Q 010428 136 TGIDPHNRQVQNLAVPKNL-S---DP-YLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-N-- 207 (511)
Q Consensus 136 Tg~~~~~~q~q~lA~s~d~-~---d~-~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~-~-- 207 (511)
.+... .+.++...+. . .+ .+....+. ..+++... .......+..|. +++ .+|+|||++++.. .
T Consensus 145 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~EgP~-i~k-~~g~yyl~yS~~~~~~~ 215 (318)
T d1gyha_ 145 GSFWG----GLKLFKLNDDLTRPAEPQEWHSIAKL-ERSVLMDD--SQAGSAQIEAPF-ILR-KGDYYYLFASWGLCCRK 215 (318)
T ss_dssp CBSTT----CEEEEEBCTTSSSBCSSCCEEEEECC-CCCTTSCT--TSCCSCCEEEEE-EEE-ETTEEEEEEEESCCSCG
T ss_pred cCCCC----CeeeEecCccceeecccccccccccc-ccceeecc--CCCCCceeecCE-EEE-ECCEEEEEEecCCCCCC
Confidence 76432 2222222111 0 00 00111121 12222222 222233456788 456 5899999997653 1
Q ss_pred --CccEEEEEEcCCCC-CcE
Q 010428 208 --RKGLAILYRSKDFV-HWI 224 (511)
Q Consensus 208 --~~G~i~ly~S~Dl~-~W~ 224 (511)
....+.+++|+++. -|+
T Consensus 216 ~~~~y~~~~~~s~~~~Gp~~ 235 (318)
T d1gyha_ 216 GDSTYHLVVGRSKQVTGPYL 235 (318)
T ss_dssp GGCCCEEEEEEESSTTSCCB
T ss_pred CcccceeeeecccCCCCCcc
Confidence 12367788888875 354
|
| >d2exha2 b.67.2.1 (A:3-324) Beta-D-xylosidase N-terminal domain {Geobacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Geobacillus stearothermophilus [TaxId: 1422]
Probab=97.47 E-value=0.00068 Score=65.66 Aligned_cols=153 Identities=9% Similarity=0.038 Sum_probs=82.4
Q ss_pred CCCccCCcceEEECCEEEEEeeeCCCCC-CCCCcEEEEEEeCCCC-cceecCCCCCCCCCccCCCeEeeeEEEcCCCceE
Q 010428 55 KNWINDPNGVMIYKGIYHLFYQYNPKGA-VWGNIVWAHSTSKDLI-NWIPHDPAIYPSQQSDINGCWSGSATILPGEKPA 132 (511)
Q Consensus 55 ~gw~NDPnG~~~~~G~YHLFYQ~~P~~~-~~g~~~WgHa~S~DLv-hW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~ 132 (511)
.+.+.-| -+.+++|+|||||....... .+...+-..++|++.- .|++.. .+. ......++++++||+.|
T Consensus 68 ~~~~WAP-ev~~~~G~yylyys~~~~~~~~~~~~~~~~~~sd~~~gp~~~~~-~~~-------~~~~dp~~f~d~dG~~Y 138 (322)
T d2exha2 68 SGGVWAP-HLSYSDGKFWLIYTDVKVVEGQWKDGHNYLVTCDTIDGAWSDPI-YLN-------SSGFDPSLFHDEDGRKY 138 (322)
T ss_dssp TCBBCSC-EEEEETTEEEEEEEEECCCSSSCCCEEEEEEEESSTTSCCCCCE-ECC-------CSCSCCEEEECTTSCEE
T ss_pred cCCcccc-eEEEECCEEEEEEEeecccCCCccccceEEEecCCCCCCcccce-Eec-------CCCCCCCeEEEcCCCEE
Confidence 4456678 48899999999998654332 2223334455555543 455421 121 11234667778899999
Q ss_pred EEEeccCCC--CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeec-CCc
Q 010428 133 IFYTGIDPH--NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-NRK 209 (511)
Q Consensus 133 l~YTg~~~~--~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~-~~~ 209 (511)
|+|.+.... ......+.+.+... ..++.. ..|...-. +.....+..|++ ++ .+|+|||+++... ...
T Consensus 139 l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~---~~~~~~~Egp~i-~k-~~g~YYl~~s~~~~~~~ 208 (322)
T d2exha2 139 LVNMYWDHRVDHHPFYGIVLQEYSV----EQKKLV-GEPKIIFK---GTDLRITEGPHL-YK-INGYYYLLTAEGGTRYN 208 (322)
T ss_dssp EEEEEECCCTTSCSEEEEEEEEEET----TTTEEE-EEEEEEEC---CCTTCCCEEEEE-EE-ETTEEEEEEEESCSSTT
T ss_pred EEecccCCccCcCCccceEEeeecC----cCCeEC-CCcEEEEE---ecCCCcccCcEE-EE-ECCEEEEEEeCCCCCCC
Confidence 998765431 12222333322111 112221 23332110 111233568884 56 5889999987653 222
Q ss_pred cEEEEEEcCCCC-CcEEc
Q 010428 210 GLAILYRSKDFV-HWIKA 226 (511)
Q Consensus 210 G~i~ly~S~Dl~-~W~~~ 226 (511)
-++.+++|+++. -|+..
T Consensus 209 y~v~~~rS~~~~GP~~~~ 226 (322)
T d2exha2 209 HAATIARSTSLYGPYEVH 226 (322)
T ss_dssp CEEEEEEESSTTCCCEEC
T ss_pred ceEEEEEeCCCCcccccC
Confidence 367899999876 46543
|
| >d1wl7a1 b.67.2.1 (A:2-313) Arabinanase-TS {Bacillus thermodenitrificans [TaxId: 33940]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Arabinanase-TS species: Bacillus thermodenitrificans [TaxId: 33940]
Probab=97.33 E-value=0.00071 Score=64.91 Aligned_cols=151 Identities=15% Similarity=0.213 Sum_probs=84.6
Q ss_pred CCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeC-----C-CCcceecCCCCCCCCCccCCCeEeeeEEEcCCC
Q 010428 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSK-----D-LINWIPHDPAIYPSQQSDINGCWSGSATILPGE 129 (511)
Q Consensus 56 gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~-----D-LvhW~~~~~aL~P~~~~D~~g~~SGsav~~~dg 129 (511)
+.+.-| .+++.+|+|||||..+..+. +....+.+++. + ...|++.++.+.+... +......++++.+.||
T Consensus 80 ~~~WAP-~v~~~~g~yyl~~t~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~iD~~~f~d~dG 155 (312)
T d1wl7a1 80 DHLWAP-DICFYNGIYYLYYSVSTFGK--NTSVIGLATNRTLDPRDPDYEWKDMGPVIHSTAS-DNYNAIDPNVVFDQEG 155 (312)
T ss_dssp CEEEEE-EEEEETTEEEEEEEECCTTC--CCEEEEEEEESCSCTTSTTCCCEEEEEEEEECTT-SSSCCCSCEEEECTTS
T ss_pred CceEcc-eEEEeCCEEEEEEEeecCCc--ccceeeEEEEecccCCCCccccccccceecCCCC-CCCCcCCCceeEccCC
Confidence 334446 47889999999999876543 33444545432 1 2466665443333221 2234456788888899
Q ss_pred ceEEEEeccCCCCcceEEEEEe-cCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeec--
Q 010428 130 KPAIFYTGIDPHNRQVQNLAVP-KNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-- 206 (511)
Q Consensus 130 ~~~l~YTg~~~~~~q~q~lA~s-~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~-- 206 (511)
+.+++|.+... ...++.. .|. ..... ....+.... .+.+..-+.-|.+ ++ .+|+|||++++..
T Consensus 156 ~~y~~~~~~~~----~i~~~~l~~d~-----~~~~~-~~~~i~~~~--~~~~~~~~EgP~v-~k-~~g~yYl~ys~~~~~ 221 (312)
T d1wl7a1 156 QPWLSFGSFWS----GIQLIQLDTET-----MKPAA-QAELLTIAS--RGEEPNAIEAPFI-VC-RNGYYYLFVSFDFCC 221 (312)
T ss_dssp CEEEEECBSTT----CEEEEEBCTTT-----CSBCT-TCCCEEEEC--CSSSSCCEEEEEE-EE-ETTEEEEEEEESCCS
T ss_pred cEEEeecCCCC----ceeEEEEcCcC-----CcCcC-CceEEEecc--cCCCCCcccccEE-EE-ECCcEEEEEecCCCc
Confidence 99999876432 2233322 221 11111 112233222 2223334568884 56 5899999997643
Q ss_pred ---CCccEEEEEEcCCCC-CcE
Q 010428 207 ---NRKGLAILYRSKDFV-HWI 224 (511)
Q Consensus 207 ---~~~G~i~ly~S~Dl~-~W~ 224 (511)
....++.+++|+++. -|+
T Consensus 222 ~~~~~~~~~~~a~s~~~~GP~~ 243 (312)
T d1wl7a1 222 RGIESTYKIAVGRSKDITGPYV 243 (312)
T ss_dssp SGGGCCCEEEEEEESSTTCCCB
T ss_pred CCCCCCceEEEEecCCCCcccc
Confidence 122367889998876 344
|
| >d1oyga_ b.67.2.2 (A:) Levansucrase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Levansucrase domain: Levansucrase species: Bacillus subtilis [TaxId: 1423]
Probab=95.85 E-value=0.028 Score=56.80 Aligned_cols=145 Identities=11% Similarity=0.091 Sum_probs=82.5
Q ss_pred ECCEEEEEeeeCCCCCCC-C--CcEEEEE-EeCCCCcce---ecCCCCCCCCC-c---------------cCCCeEeeeE
Q 010428 67 YKGIYHLFYQYNPKGAVW-G--NIVWAHS-TSKDLINWI---PHDPAIYPSQQ-S---------------DINGCWSGSA 123 (511)
Q Consensus 67 ~~G~YHLFYQ~~P~~~~~-g--~~~WgHa-~S~DLvhW~---~~~~aL~P~~~-~---------------D~~g~~SGsa 123 (511)
.||+++|||..+...... . ...-+++ .|.+.+.|+ ..++.+.|++. | |....=.+.+
T Consensus 138 ~DG~~~LfYTg~~~~~~~~q~i~~a~~~~~~d~~~~~~~~~~~~~~l~~pDG~~Yqt~~q~~~~~~~~~~d~~~fRDP~v 217 (440)
T d1oyga_ 138 SDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSSLNINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLRDPHY 217 (440)
T ss_dssp TTSCEEEEEEEEEGGGTTEEEEEEEEEEEEECSSCEEEEEEEEEEEEECCCSSSBCCHHHHHHHTGGGGTCCCCCEEEEE
T ss_pred cCCeEEEEEEeccCCCCCcceEEEEEEEEeecCCcceeecccCCceeecCCCccceeeecccccCCCCCCCcccccCCce
Confidence 699999999965332211 1 1222343 444556654 34566777643 2 1122335666
Q ss_pred EEcCCCceEEEEeccCCC--Cc---------------------------------------ceEEEEEecCCCCccccee
Q 010428 124 TILPGEKPAIFYTGIDPH--NR---------------------------------------QVQNLAVPKNLSDPYLREW 162 (511)
Q Consensus 124 v~~~dg~~~l~YTg~~~~--~~---------------------------------------q~q~lA~s~d~~d~~l~~w 162 (511)
+. ++|+.||++.|+... +. ..++++...+ | +..|
T Consensus 218 ~~-~~g~~y~~fegn~~~~~G~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~ng~I~l~~~s~--D--~~~W 292 (440)
T d1oyga_ 218 VE-DKGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELND--D--YTLK 292 (440)
T ss_dssp EE-ETTEEEEEEEEEBCTTSCCSSGGGGGBGGGTCSCHHHHHHHHHHHHHSTTHHHHHHCCEEEEEEEECT--T--SSEE
T ss_pred ee-eCCeEEEEEeccccccccccccchhccccccccccccccccccccccccccccceeccceEEEEEeCC--C--cccc
Confidence 55 589999999886431 10 1234444322 1 4789
Q ss_pred eecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeec-----C---Ccc-EEEEEEcCCCC-CcE
Q 010428 163 VKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-----N---RKG-LAILYRSKDFV-HWI 224 (511)
Q Consensus 163 ~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~-----~---~~G-~i~ly~S~Dl~-~W~ 224 (511)
+.. .|++... .. ...+.-|.+ ++ .+|+|||+..++. + ..+ .+..|-|+.+. .|+
T Consensus 293 e~~--~pLl~a~--~v--~d~~ErP~I-~~-~nGKYYLFtss~~~~~a~~~~~~~~~~~~g~Vsdsl~Gpy~ 356 (440)
T d1oyga_ 293 KVM--KPLIASN--TV--TDEIERANV-FK-MNGKWYLFTDSRGSKMTIDGITSNDIYMLGYVSNSLTGPYK 356 (440)
T ss_dssp EEE--EEEEECT--TT--CSCCEEEEE-EE-ETTEEEEEEEEEGGGCCCTTCCTTCEEEEEEEESSTTCCCE
T ss_pred eec--Ccceecc--CC--CCeEECCEE-EE-ECCEEEEEEecccccccCCCcCCCCceEEEEECCCCCCCCe
Confidence 876 4888654 21 234678885 45 5899999887653 1 122 35567787765 575
|
| >d1y4wa1 b.29.1.19 (A:373-536) Exo-inulinase {Aspergillus awamori [TaxId: 105351]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Concanavalin A-like lectins/glucanases superfamily: Concanavalin A-like lectins/glucanases family: Glycosyl hydrolases family 32 C-terminal domain domain: Exo-inulinase species: Aspergillus awamori [TaxId: 105351]
Probab=94.58 E-value=0.0086 Score=52.46 Aligned_cols=37 Identities=24% Similarity=0.270 Sum_probs=30.6
Q ss_pred cceeEEeecCCCceeeEEEEEEEeCCCCcEEEEEecCCCCccCc
Q 010428 445 PFGLLALASKDLKEYTAVFFRIFKGEDNKFVVLMCSDQSRSLQF 488 (511)
Q Consensus 445 ~~Gl~v~~s~~~~E~t~i~f~~~~~~~~~~~~~~~~d~~~Ss~~ 488 (511)
.||+.+++++++.|+|.|+|+....+ +++||++|+..
T Consensus 48 ~fgl~lr~s~d~~e~t~i~yd~~~~~-------l~vDRs~sg~~ 84 (164)
T d1y4wa1 48 TFAIALRASANFTEQTLVGYDFAKQQ-------IFLDRTHSGDV 84 (164)
T ss_dssp EEEEEEEECTTSSSCEEEEEETTTTE-------EEEECTTSSCC
T ss_pred EEEEEEEEcCCCCEEEEEEEECCCCE-------EEEECCCCCCC
Confidence 69999999999999999999854322 68899999754
|
| >d1w8oa3 b.68.1.1 (A:47-402) Micromonospora sialidase, N-terminal domain {Micromonospora viridifaciens [TaxId: 1881]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Micromonospora sialidase, N-terminal domain species: Micromonospora viridifaciens [TaxId: 1881]
Probab=90.22 E-value=0.71 Score=42.40 Aligned_cols=102 Identities=14% Similarity=0.065 Sum_probs=61.2
Q ss_pred eE-eeeEEEcCCCceEEEEeccCC----CCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEe
Q 010428 118 CW-SGSATILPGEKPAIFYTGIDP----HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWL 192 (511)
Q Consensus 118 ~~-SGsav~~~dg~~~l~YTg~~~----~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~ 192 (511)
+| .++.+..+||+++++|.+... .....+.++.|+|++ ++|++. ..|...+ .......+.+|.++..
T Consensus 20 ~~RiPslv~~~~G~lla~~~~r~~~~~d~~~~~i~~~rS~D~G----~TWs~~--~~v~~~~--~~~~~~~~~~~~~v~~ 91 (356)
T d1w8oa3 20 NYRIPALTVTPDGDLLASYDGRPTGIGAPGPNSILQRRSTDGG----RTWGEQ--QVVSAGQ--TTAPIKGFSDPSYLVD 91 (356)
T ss_dssp CEEEEEEEECTTSCEEEEEEECTTSCSTTSCCEEEEEEESSTT----SSCCCC--EEEECCB--CSSSCBEEEEEEEEEC
T ss_pred eeEeCEEEEECCCCEEEEEeeeeCCCCCCCCceEEEEEccCCC----CCCCCC--EEeecCC--CCCcccccccceEEEe
Confidence 46 477777789999999977432 234567788999976 899753 2222322 2222345678886666
Q ss_pred CCCCeEEEEEeeecC---------------CccEEEEEEcCC-CCCcEEcc
Q 010428 193 GPDKRWRVIIGSKIN---------------RKGLAILYRSKD-FVHWIKAK 227 (511)
Q Consensus 193 ~~~g~w~m~~ga~~~---------------~~G~i~ly~S~D-l~~W~~~~ 227 (511)
..+|.-+++...... ..-.+.+++|.| ..+|....
T Consensus 92 ~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G~tW~~~~ 142 (356)
T d1w8oa3 92 RETGTIFNFHVYSQRQGFAGSRPGTDPADPNVLHANVATSTDGGLTWSHRT 142 (356)
T ss_dssp TTTCCEEEEEEEESSCCTTTCCSCCCTTCTTSCEEEEEEESSTTSSCEEEE
T ss_pred CCCCeEEEEEeeeccCCcccccccCCCCCCcEEEEEEEecCCccccccccc
Confidence 556665444432210 012466777765 57998643
|
| >d2b4wa1 b.67.2.5 (A:2-311) Hypothetical protein LmjF10.1260 {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: LmjF10.1260-like domain: Hypothetical protein LmjF10.1260 species: Leishmania major [TaxId: 5664]
Probab=87.41 E-value=0.11 Score=49.59 Aligned_cols=92 Identities=11% Similarity=-0.019 Sum_probs=56.6
Q ss_pred CCeEeeeEEEcCCCceEEEEeccCCCC--cceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeC
Q 010428 116 NGCWSGSATILPGEKPAIFYTGIDPHN--RQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLG 193 (511)
Q Consensus 116 ~g~~SGsav~~~dg~~~l~YTg~~~~~--~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~ 193 (511)
.-||..+|....+|+++|++.-..++. ....+++.+.+. .+|+..+ +|+. ...||.|.+.
T Consensus 27 ~DVyN~~apf~~~Gk~~l~~RvE~rd~~s~s~v~lf~~~g~-----~~f~~~~-~p~~-----------glEDPrvt~i- 88 (310)
T d2b4wa1 27 YDVYNCSVPFSYKGKTHIYGRVEKRDIWAASHVRLFEETGK-----DEFTAVP-ELSW-----------ELEDPYIAKI- 88 (310)
T ss_dssp CEEESCCCCEEETTEEEEEEEEECTTCSSCCEEEEEEEEET-----TEEEECT-TCCB-----------SCEEEEEEEE-
T ss_pred cceecCCcEEEECCEEEEEEEEEccCcceEEEEEEEEecCC-----cceEECC-cccc-----------cCCCCCEEeE-
Confidence 338998885545899999998765543 334444444432 5777654 4553 3469997764
Q ss_pred CCCeEEEEEeeecCCccEEEEEEcCCCCCcEEc
Q 010428 194 PDKRWRVIIGSKINRKGLAILYRSKDFVHWIKA 226 (511)
Q Consensus 194 ~~g~w~m~~ga~~~~~G~i~ly~S~Dl~~W~~~ 226 (511)
+|.|+|-.-+.....+.+.+|++.|++.|...
T Consensus 89 -~g~lv~~~t~~~~~~~~~~~~~t~~~r~~~~~ 120 (310)
T d2b4wa1 89 -NNEMIFGGTRVRKNGNAILSYYGYFYRGTPDE 120 (310)
T ss_dssp -TTEEEEEEEEEC-----CCCEEEEEEEEETTE
T ss_pred -CCEEEEEEEEecCCCCcceEEEeeeeecchhc
Confidence 68887654443333455668888888888643
|
| >d1uypa1 b.29.1.19 (A:295-432) Beta-fructosidase (invertase), C-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Concanavalin A-like lectins/glucanases superfamily: Concanavalin A-like lectins/glucanases family: Glycosyl hydrolases family 32 C-terminal domain domain: Beta-fructosidase (invertase), C-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=86.05 E-value=0.69 Score=38.27 Aligned_cols=29 Identities=10% Similarity=0.039 Sum_probs=22.9
Q ss_pred EEEEEEeCCCCcEEEEEecCCCCccCcccc
Q 010428 462 VFFRIFKGEDNKFVVLMCSDQSRSLQFFSF 491 (511)
Q Consensus 462 i~f~~~~~~~~~~~~~~~~d~~~Ss~~~~~ 491 (511)
+..+++.|. ++.++|++..+..|+..|..
T Consensus 85 ~~LrIfvD~-SsvEiFiNdg~v~t~rvfP~ 113 (138)
T d1uypa1 85 NRIRAFLDS-CSVEFFFNDSIAFSFRIHPE 113 (138)
T ss_dssp EEEEEEEET-TEEEEEETTTEEEEEECCCS
T ss_pred EEEEEEEEe-eEEEEEECCCEEEEEEEcCC
Confidence 567788887 89999999766778877743
|